Query psy11549
Match_columns 261
No_of_seqs 154 out of 1938
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 21:21:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11549.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11549hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nzi_A Titin; IG-domain, FNIII 100.0 5.6E-31 1.9E-35 202.5 29.2 240 1-249 39-290 (305)
2 2jll_A NCAM2, neural cell adhe 100.0 1.1E-30 3.8E-35 207.4 31.7 242 2-250 36-289 (389)
3 2rik_A Titin; I-SET IG fold, p 100.0 1.3E-28 4.4E-33 187.5 25.7 236 1-248 40-283 (284)
4 2wim_A N-CAM 2, NCAM2, neural 100.0 9.7E-29 3.3E-33 188.8 22.7 241 3-253 41-288 (291)
5 1qz1_A Neural cell adhesion mo 100.0 5.6E-29 1.9E-33 190.1 21.1 237 3-248 41-289 (291)
6 3b43_A Titin; I-SET IG fold, e 100.0 1.5E-28 5.3E-33 204.2 24.3 234 1-248 326-569 (570)
7 3b43_A Titin; I-SET IG fold, e 100.0 2.9E-28 9.7E-33 202.6 21.2 237 1-249 232-476 (570)
8 2yd9_A Receptor-type tyrosine- 100.0 2.5E-27 8.6E-32 182.1 17.6 236 1-250 41-292 (304)
9 3kld_A Contactin 4, axcam, BIG 100.0 6.4E-27 2.2E-31 185.6 19.6 231 1-248 138-382 (384)
10 1ry7_B FGFR-3, fibroblast grow 100.0 3.5E-27 1.2E-31 183.6 17.7 239 1-251 44-329 (334)
11 3laf_A Deleted in colorectal c 99.9 5.1E-27 1.7E-31 187.2 16.8 236 1-250 156-402 (403)
12 1e07_A Carcinoembryonic antige 99.9 5.6E-26 1.9E-30 191.5 23.8 228 1-248 323-556 (642)
13 3o4o_C Interleukin-1 receptor 99.9 4.1E-27 1.4E-31 183.6 15.7 242 1-248 60-334 (339)
14 3oq3_B IFN-alpha/beta binding 99.9 1.8E-26 6.3E-31 179.2 16.2 232 1-247 73-328 (329)
15 3kld_A Contactin 4, axcam, BIG 99.9 1.7E-26 5.7E-31 183.2 15.2 239 1-249 43-294 (384)
16 2y25_A Myomesin; structural pr 99.9 2.8E-27 9.5E-32 182.8 10.4 239 1-250 42-316 (317)
17 3dmk_A DOWN syndrome cell adhe 99.9 1E-25 3.4E-30 194.8 19.7 238 1-248 561-808 (816)
18 2ec8_A MAST/stem cell growth f 99.9 2.2E-25 7.5E-30 183.6 20.7 239 3-249 152-411 (524)
19 2y23_A Myomesin; structural pr 99.9 1.1E-25 3.6E-30 173.5 17.6 234 1-247 37-310 (312)
20 4fqp_A Poliovirus receptor; im 99.9 7.5E-26 2.5E-30 174.6 16.4 221 19-254 78-309 (313)
21 1e07_A Carcinoembryonic antige 99.9 1E-24 3.4E-29 183.9 24.2 220 1-240 145-369 (642)
22 3laf_A Deleted in colorectal c 99.9 2.3E-25 8E-30 177.6 18.6 241 1-250 57-312 (403)
23 1cs6_A Axonin-1; neural cell a 99.9 3.6E-25 1.2E-29 175.4 19.0 237 1-249 42-293 (382)
24 1cs6_A Axonin-1; neural cell a 99.9 1.7E-25 5.8E-30 177.2 16.6 228 1-248 137-381 (382)
25 4fom_A Poliovirus receptor-rel 99.9 1.9E-26 6.3E-31 177.6 10.4 222 19-253 73-304 (308)
26 2o26_X MAST/stem cell growth f 99.9 2.6E-25 8.9E-30 169.7 16.3 227 2-249 44-288 (290)
27 1itb_B Type 1 interleukin-1 re 99.9 1.7E-25 5.8E-30 172.7 15.1 237 1-248 41-313 (315)
28 2v5m_A Dscam; neurobiology SPL 99.9 2.7E-25 9.2E-30 176.4 16.6 227 2-247 142-387 (388)
29 3vh8_G Killer cell immunoglobu 99.9 3.6E-25 1.2E-29 171.0 16.6 238 1-252 57-314 (316)
30 3ejj_X Macrophage colony-stimu 99.9 9.3E-25 3.2E-29 166.5 18.4 225 19-253 50-285 (289)
31 3p3y_A Neurofascin; IG domains 99.9 2.2E-25 7.4E-30 177.8 15.5 233 2-248 153-402 (404)
32 3rjd_A High affinity immunoglo 99.9 8.4E-24 2.9E-28 158.9 22.7 214 2-249 38-260 (262)
33 4dkd_C Macrophage colony-stimu 99.9 2.7E-25 9.2E-30 169.7 11.9 223 20-254 51-286 (292)
34 3mtr_A N-CAM-1, NCAM-1, neural 99.9 6.6E-23 2.3E-27 149.6 23.7 185 57-251 18-211 (215)
35 4dep_C Interleukin-1 receptor 99.9 6E-25 2.1E-29 172.0 13.7 229 12-249 71-333 (349)
36 2v5m_A Dscam; neurobiology SPL 99.9 4.6E-24 1.6E-28 169.3 18.3 242 1-249 39-306 (388)
37 2ec8_A MAST/stem cell growth f 99.9 1.4E-24 4.9E-29 178.8 15.6 219 17-251 270-512 (524)
38 3p3y_A Neurofascin; IG domains 99.9 3.2E-24 1.1E-28 171.0 17.0 240 1-249 52-311 (404)
39 3qs9_E FL cytokine receptor; i 99.9 3.5E-24 1.2E-28 175.8 16.3 222 1-248 263-509 (527)
40 3qs7_E FL cytokine receptor; i 99.9 3.2E-23 1.1E-27 165.9 21.1 210 21-248 104-322 (423)
41 2ocw_A Polymeric-immunoglobuli 99.9 1.8E-22 6.2E-27 168.4 26.3 221 21-250 291-547 (585)
42 2ocw_A Polymeric-immunoglobuli 99.9 2.8E-22 9.5E-27 167.2 26.7 205 21-237 76-314 (585)
43 3u83_A Poliovirus receptor-rel 99.9 1.9E-23 6.4E-28 162.3 18.2 219 19-253 91-324 (331)
44 2jll_A NCAM2, neural cell adhe 99.9 9.8E-22 3.4E-26 155.9 28.0 237 1-248 135-384 (389)
45 3dmk_A DOWN syndrome cell adhe 99.9 1.1E-22 3.8E-27 175.8 23.6 234 1-250 464-714 (816)
46 1bih_A Hemolin; insect immunit 99.9 1.1E-23 3.6E-28 167.5 15.7 240 1-248 42-306 (395)
47 3mjg_X Beta-type platelet-deri 99.9 8E-24 2.7E-28 161.4 13.7 218 20-256 51-285 (289)
48 3qs9_E FL cytokine receptor; i 99.9 9.7E-24 3.3E-28 173.2 15.0 210 25-249 196-414 (527)
49 1bih_A Hemolin; insect immunit 99.9 3.8E-23 1.3E-27 164.3 17.4 221 12-247 153-394 (395)
50 3qs7_E FL cytokine receptor; i 99.9 3.5E-23 1.2E-27 165.7 16.5 209 28-254 199-419 (423)
51 2wng_A Tyrosine-protein phosph 99.9 1.5E-23 5.2E-28 162.7 13.0 215 19-244 73-314 (327)
52 1z7z_I Intercellular adhesion 99.9 5.5E-23 1.9E-27 166.3 15.5 215 21-249 51-282 (450)
53 1wio_A CD4, T-cell surface gly 99.9 4E-22 1.4E-26 156.9 18.7 202 19-248 66-292 (363)
54 2wv3_A Neuroplastin; igcam, me 99.9 7.5E-22 2.5E-26 141.2 17.8 145 1-152 40-189 (190)
55 2oz4_A Intercellular adhesion 99.9 2.3E-22 7.9E-27 151.4 15.3 209 1-248 41-263 (265)
56 1wio_A CD4, T-cell surface gly 99.9 2.5E-22 8.6E-27 158.0 14.6 198 16-246 138-360 (363)
57 2rcj_C Light chain; immunoglob 99.9 1.1E-21 3.6E-26 161.7 18.7 232 1-243 151-414 (523)
58 2rcj_C Light chain; immunoglob 99.9 2.3E-21 7.8E-26 159.7 19.7 216 21-245 71-312 (523)
59 2v44_A NCAM2, neural cell adhe 99.9 4.9E-21 1.7E-25 136.8 18.2 148 1-153 36-187 (189)
60 2j8h_A Titin, connectin; cardi 99.9 9.5E-21 3.2E-25 136.2 19.2 148 1-151 39-195 (197)
61 1epf_A NCAM, protein (neural c 99.9 4.3E-21 1.5E-25 137.3 16.8 148 1-152 38-190 (191)
62 2iep_A Muscle-specific kinase 99.9 3.7E-21 1.3E-25 137.7 16.2 149 1-156 42-191 (192)
63 2r15_A Myomesin-1; sarcomeric 99.9 7.3E-21 2.5E-25 138.3 17.2 148 1-152 38-209 (212)
64 2a38_A Titin; Z1Z2, structural 99.9 1.1E-20 3.8E-25 135.5 17.8 146 1-150 40-192 (194)
65 2v5t_A NCAM2, N-CAM 2, neural 99.9 1.1E-20 3.7E-25 134.9 17.6 149 1-153 37-188 (189)
66 2va4_A NCAM2, N-CAM 2, neural 99.9 1.3E-20 4.6E-25 134.8 17.9 146 1-150 39-190 (192)
67 2yd1_A Tyrosine-protein phosph 99.9 1.1E-20 3.6E-25 137.6 17.0 151 1-158 41-203 (212)
68 3rbs_A Myomesin-1; immunoglobu 99.9 1.2E-20 4.1E-25 136.6 17.0 140 1-149 38-203 (207)
69 1qgc_4 Protein (immunoglobulin 99.9 2.6E-22 8.9E-27 161.7 9.1 213 20-241 181-431 (438)
70 3v2a_R Vascular endothelial gr 99.9 1E-23 3.6E-28 181.1 0.0 218 20-251 515-758 (772)
71 1z7z_I Intercellular adhesion 99.9 3.8E-21 1.3E-25 155.5 13.7 211 1-248 226-448 (450)
72 1qgc_4 Protein (immunoglobulin 99.9 1.8E-20 6.1E-25 151.0 17.5 205 21-237 76-321 (438)
73 2rik_A Titin; I-SET IG fold, p 99.9 3.9E-20 1.3E-24 140.6 18.4 147 1-151 134-282 (284)
74 2c5d_C AXL oncogene, tyrosine- 99.9 3.3E-20 1.1E-24 133.2 16.9 142 1-151 38-191 (195)
75 3v2a_R Vascular endothelial gr 99.9 9E-21 3.1E-25 162.9 15.8 235 4-248 167-416 (772)
76 3lcy_A Titin; A-BAND, IG tande 99.9 1.3E-19 4.4E-24 130.1 18.8 147 1-151 42-194 (197)
77 2yd6_A PTPRD protein; hydrolas 99.9 7.9E-20 2.7E-24 133.0 17.4 149 1-152 41-203 (212)
78 1rhf_A Tyrosine-protein kinase 99.9 3.6E-20 1.2E-24 131.5 15.1 134 1-145 37-174 (182)
79 2x1w_L Vascular endothelial gr 99.8 3.7E-20 1.3E-24 134.9 15.2 152 3-157 48-209 (213)
80 4fa8_A Secreted protein BARF1; 99.8 1.2E-20 4E-25 136.0 12.3 122 21-145 70-194 (203)
81 2v5y_A Receptor-type tyrosine- 99.8 3.8E-19 1.3E-23 151.9 23.3 222 21-251 124-356 (731)
82 1qz1_A Neural cell adhesion mo 99.8 1.1E-19 3.8E-24 138.4 18.1 149 1-152 135-289 (291)
83 3grw_A Fibroblast growth facto 99.8 8.9E-20 3E-24 135.2 16.7 155 1-161 50-224 (241)
84 3jz7_A MCAR, CAR, coxsackievir 99.8 2.6E-20 8.8E-25 135.5 13.3 129 19-155 83-212 (214)
85 3sgj_C Human FCG3A receptor; r 99.8 2.5E-20 8.6E-25 134.7 12.1 138 1-161 43-180 (204)
86 2o26_X MAST/stem cell growth f 99.8 8.3E-20 2.8E-24 139.2 15.5 152 2-157 128-290 (290)
87 3ojm_B Fibroblast growth facto 99.8 1.3E-19 4.5E-24 133.4 15.9 155 1-161 54-227 (231)
88 2iep_A Muscle-specific kinase 99.8 6.1E-20 2.1E-24 131.3 13.6 179 57-248 6-189 (192)
89 1f97_A Junction adhesion molec 99.8 4.3E-20 1.5E-24 134.2 12.3 139 14-154 59-206 (212)
90 2j8h_A Titin, connectin; cardi 99.8 3.8E-19 1.3E-23 127.7 16.4 181 58-247 4-195 (197)
91 3lcy_A Titin; A-BAND, IG tande 99.8 5.6E-19 1.9E-23 126.8 17.0 184 57-248 6-195 (197)
92 2c1o_A IGK-C protein; FAB frag 99.8 1.2E-19 4.1E-24 135.7 13.5 202 27-239 11-245 (254)
93 2yd6_A PTPRD protein; hydrolas 99.8 8.2E-19 2.8E-23 127.6 17.5 178 57-243 5-197 (212)
94 2wim_A N-CAM 2, NCAM2, neural 99.8 2.1E-19 7.2E-24 136.9 15.0 147 1-151 133-282 (291)
95 2yd1_A Tyrosine-protein phosph 99.8 4.5E-19 1.6E-23 128.9 16.0 182 58-251 6-202 (212)
96 3k0w_A Mucosa-associated lymph 99.8 3.3E-19 1.1E-23 130.3 15.3 135 1-155 53-202 (218)
97 2a38_A Titin; Z1Z2, structural 99.8 4.1E-19 1.4E-23 127.2 15.5 182 57-247 4-193 (194)
98 1n26_A IL-6 receptor alpha cha 99.8 4E-18 1.4E-22 132.0 21.9 232 2-246 43-289 (325)
99 2y25_A Myomesin; structural pr 99.8 5.2E-19 1.8E-23 136.3 16.3 147 1-152 143-314 (317)
100 3s97_C Contactin-1; carbonic a 99.8 5.6E-19 1.9E-23 127.2 15.3 144 1-151 45-199 (201)
101 2v9r_A Roundabout homolog 1; p 99.8 3.5E-19 1.2E-23 129.4 14.0 152 1-158 44-205 (212)
102 2v5t_A NCAM2, N-CAM 2, neural 99.8 4.4E-19 1.5E-23 126.5 14.3 172 69-248 12-187 (189)
103 3p2t_A Leukocyte immunoglobuli 99.8 3E-19 1E-23 128.3 13.0 170 70-249 15-194 (196)
104 3r4d_A CEA-related cell adhesi 99.8 5.8E-19 2E-23 127.9 14.5 139 12-159 63-204 (208)
105 3ojm_B Fibroblast growth facto 99.8 1.9E-18 6.5E-23 127.1 17.5 190 57-253 14-225 (231)
106 2v44_A NCAM2, neural cell adhe 99.8 8.4E-18 2.9E-22 119.9 20.2 169 69-247 12-185 (189)
107 2wv3_A Neuroplastin; igcam, me 99.8 7.1E-18 2.4E-22 120.4 19.6 174 58-248 3-189 (190)
108 1itb_B Type 1 interleukin-1 re 99.8 1.8E-18 6.2E-23 133.3 17.6 147 1-151 144-312 (315)
109 3p2t_A Leukocyte immunoglobuli 99.8 7.3E-20 2.5E-24 131.5 9.0 137 1-141 38-179 (196)
110 3oq3_B IFN-alpha/beta binding 99.8 4.4E-18 1.5E-22 132.0 19.5 146 1-150 164-327 (329)
111 1hng_A CD2; T lymphocyte adhes 99.8 1.2E-19 4.2E-24 128.0 9.8 117 11-146 52-169 (176)
112 2vr9_A Roundabout 1, ROBO; imm 99.8 1.2E-18 4.1E-23 127.1 15.3 188 57-252 8-209 (217)
113 1i1r_A GP130, interleukin-6 re 99.8 3.6E-18 1.2E-22 131.0 18.6 167 69-242 14-188 (303)
114 2va4_A NCAM2, N-CAM 2, neural 99.8 1E-18 3.6E-23 124.9 14.6 179 58-247 2-191 (192)
115 3grw_A Fibroblast growth facto 99.8 5.5E-18 1.9E-22 125.6 18.6 181 68-254 24-223 (241)
116 1f97_A Junction adhesion molec 99.8 6.3E-18 2.1E-22 122.7 18.5 174 69-249 11-205 (212)
117 1igt_B IGG2A intact antibody - 99.8 1E-19 3.5E-24 146.9 9.8 213 20-240 79-332 (444)
118 1nbq_A JAM, junctional adhesio 99.8 6.1E-20 2.1E-24 133.1 7.7 137 14-152 62-206 (209)
119 2d3v_A Leukocyte immunoglobuli 99.8 1.4E-18 4.8E-23 124.8 14.7 169 70-248 15-194 (196)
120 1i1r_A GP130, interleukin-6 re 99.8 2.1E-17 7.1E-22 126.8 21.6 223 1-246 46-293 (303)
121 2nzi_A Titin; IG-domain, FNIII 99.8 3.5E-18 1.2E-22 131.1 17.2 182 58-250 4-198 (305)
122 3b5h_A Cervical EMMPRIN, HAB18 99.8 2E-18 7E-23 122.6 14.6 140 1-150 35-180 (184)
123 2c5d_C AXL oncogene, tyrosine- 99.8 3.4E-18 1.2E-22 122.6 15.8 173 59-247 3-191 (195)
124 2wqr_A IG epsilon chain C regi 99.8 4E-20 1.4E-24 143.2 5.8 228 1-238 46-309 (323)
125 1fnl_A Low affinity immunoglob 99.8 8.3E-19 2.8E-23 123.7 12.0 121 18-153 52-172 (175)
126 1ugn_A LIR1, leukocyte immunog 99.8 2.8E-18 9.7E-23 123.4 14.9 170 70-249 15-196 (198)
127 1iga_A IGA1; immunoglobulin; N 99.8 1.3E-17 4.6E-22 135.6 20.7 209 20-241 80-337 (475)
128 1f2q_A High affinity immunoglo 99.8 1.1E-18 3.9E-23 123.1 12.4 125 19-158 50-174 (176)
129 3bp6_B Programmed cell death 1 99.8 2.9E-18 9.9E-23 123.7 14.8 171 69-248 12-192 (202)
130 3bp6_B Programmed cell death 1 99.8 6.8E-19 2.3E-23 127.0 11.3 124 20-151 67-191 (202)
131 2d9q_B Granulocyte colony-stim 99.8 6.7E-18 2.3E-22 130.1 17.4 244 1-251 40-307 (313)
132 2yd9_A Receptor-type tyrosine- 99.8 2.1E-18 7.3E-23 132.3 14.6 146 1-157 143-293 (304)
133 1uct_A Immunoglobulin alpha FC 99.8 2.5E-18 8.6E-23 125.4 14.1 173 70-254 19-201 (218)
134 2vr9_A Roundabout 1, ROBO; imm 99.8 1.9E-18 6.6E-23 126.0 13.4 143 1-146 44-199 (217)
135 1uct_A Immunoglobulin alpha FC 99.8 7E-19 2.4E-23 128.4 11.0 132 1-140 42-180 (218)
136 4fqp_A Poliovirus receptor; im 99.8 8.4E-19 2.9E-23 135.1 12.0 125 21-152 178-303 (313)
137 1rhf_A Tyrosine-protein kinase 99.8 7.4E-18 2.5E-22 119.5 16.0 161 69-246 12-180 (182)
138 1epf_A NCAM, protein (neural c 99.8 5.7E-18 2E-22 121.0 15.4 168 69-246 12-188 (191)
139 1za6_B IGG heavy chain; immuno 99.8 9.3E-19 3.2E-23 136.6 12.1 119 20-144 79-208 (344)
140 4fa8_A Secreted protein BARF1; 99.8 3.2E-19 1.1E-23 128.5 8.5 164 69-242 3-195 (203)
141 2ifg_A High affinity nerve gro 99.8 4E-19 1.4E-23 138.9 9.6 129 18-157 210-347 (347)
142 3jz7_A MCAR, CAR, coxsackievir 99.8 5.7E-18 1.9E-22 123.0 15.0 174 69-248 10-211 (214)
143 3ejj_X Macrophage colony-stimu 99.8 9.6E-18 3.3E-22 127.6 16.8 144 2-150 127-278 (289)
144 4fom_A Poliovirus receptor-rel 99.8 3.1E-19 1.1E-23 137.2 8.5 150 1-158 150-303 (308)
145 1ugn_A LIR1, leukocyte immunog 99.8 3.7E-19 1.3E-23 128.0 8.3 135 1-141 38-181 (198)
146 1ry7_B FGFR-3, fibroblast grow 99.8 1.8E-18 6E-23 134.4 12.6 148 1-152 158-326 (334)
147 2d3v_A Leukocyte immunoglobuli 99.8 2.4E-19 8.1E-24 128.8 6.9 137 1-141 38-180 (196)
148 4dkd_C Macrophage colony-stimu 99.8 2.2E-18 7.5E-23 131.3 12.7 149 4-158 129-284 (292)
149 1oll_A NK receptor; immune sys 99.8 7.9E-18 2.7E-22 120.0 14.7 169 70-249 14-186 (188)
150 1hzh_H IGG, immunoglobulin hea 99.8 8.8E-19 3E-23 141.9 10.2 210 21-240 80-341 (457)
151 2v5y_A Receptor-type tyrosine- 99.8 7.7E-17 2.6E-21 137.7 22.3 237 2-252 203-460 (731)
152 2gi7_A GPVI protein; IG-like d 99.8 4.1E-18 1.4E-22 121.1 12.0 159 70-248 18-182 (184)
153 1nbq_A JAM, junctional adhesio 99.8 4.7E-18 1.6E-22 123.0 12.4 172 69-247 14-205 (209)
154 4dep_C Interleukin-1 receptor 99.8 8.1E-19 2.8E-23 137.2 8.5 146 1-151 160-331 (349)
155 1oll_A NK receptor; immune sys 99.8 1.6E-18 5.4E-23 123.7 9.1 131 1-140 37-172 (188)
156 3rbs_A Myomesin-1; immunoglobu 99.8 8.5E-18 2.9E-22 121.6 12.7 170 69-246 12-204 (207)
157 1vca_A VCAM-D1,2, human vascul 99.8 1.7E-18 5.7E-23 124.9 8.9 135 20-158 54-200 (202)
158 2v9r_A Roundabout homolog 1; p 99.8 9.4E-18 3.2E-22 121.8 12.8 184 57-248 8-201 (212)
159 4f80_A Butyrophilin subfamily 99.8 3.3E-17 1.1E-21 120.3 15.7 129 20-156 83-214 (226)
160 3sbw_C Programmed cell death 1 99.8 1.3E-17 4.5E-22 121.9 13.1 131 20-157 80-213 (222)
161 4frw_A Poliovirus receptor-rel 99.8 5.5E-18 1.9E-22 123.3 11.0 131 20-154 79-212 (218)
162 1jbj_A CD3 epsilon and gamma e 99.8 1.4E-18 4.8E-23 123.7 7.5 123 1-143 32-179 (186)
163 3sgj_C Human FCG3A receptor; r 99.8 2.7E-17 9.2E-22 118.8 14.2 155 69-250 17-173 (204)
164 1iga_A IGA1; immunoglobulin; N 99.8 3.8E-17 1.3E-21 133.0 16.5 210 21-239 191-444 (475)
165 2d9q_B Granulocyte colony-stim 99.8 1.3E-16 4.3E-21 122.9 18.5 168 69-241 10-190 (313)
166 2r15_A Myomesin-1; sarcomeric 99.8 5.3E-17 1.8E-21 117.8 15.3 167 73-249 16-210 (212)
167 1p6f_A NKP46, natural cytotoxi 99.7 4.8E-18 1.6E-22 125.8 9.8 152 1-161 40-197 (242)
168 1hnf_A CD2; T lymphocyte adhes 99.7 3.6E-17 1.2E-21 115.6 13.6 117 11-146 57-174 (182)
169 2y23_A Myomesin; structural pr 99.7 2E-17 6.8E-22 127.2 13.4 141 1-150 143-309 (312)
170 1f2q_A High affinity immunoglo 99.7 8E-18 2.7E-22 118.7 10.0 143 69-237 14-158 (176)
171 1p6f_A NKP46, natural cytotoxi 99.7 1.1E-16 3.8E-21 118.4 16.5 173 70-253 17-193 (242)
172 2ifg_A High affinity nerve gro 99.7 1.7E-19 5.7E-24 141.0 1.3 199 31-249 136-345 (347)
173 2ny1_B T-cell surface glycopro 99.7 3.2E-17 1.1E-21 116.4 12.6 116 20-159 68-183 (184)
174 3ry4_A Low affinity immunoglob 99.7 2.4E-17 8.2E-22 115.5 11.8 121 1-143 40-160 (170)
175 4f80_A Butyrophilin subfamily 99.7 2.1E-16 7.1E-21 116.0 17.1 173 69-248 14-212 (226)
176 2gi7_A GPVI protein; IG-like d 99.7 4.1E-18 1.4E-22 121.1 7.7 116 17-141 49-168 (184)
177 1hng_A CD2; T lymphocyte adhes 99.7 1.9E-17 6.5E-22 116.7 11.0 161 69-247 6-174 (176)
178 3mj6_A Junctional adhesion mol 99.7 8E-17 2.7E-21 121.2 15.0 174 69-249 15-237 (268)
179 1fnl_A Low affinity immunoglob 99.7 6.4E-17 2.2E-21 113.9 13.4 144 69-238 17-162 (175)
180 1b6u_A KIR2DL3, P58 killer cel 99.7 7.2E-18 2.4E-22 125.8 8.9 165 18-192 60-236 (257)
181 1igt_B IGG2A intact antibody - 99.7 3.6E-18 1.2E-22 137.9 7.8 209 20-237 184-433 (444)
182 1igy_B IGG1 intact antibody MA 99.7 4.8E-19 1.6E-23 142.6 2.4 210 20-240 78-322 (434)
183 3s97_C Contactin-1; carbonic a 99.7 7.9E-17 2.7E-21 115.8 13.8 172 69-248 18-200 (201)
184 2fbo_J V1V2;, variable region- 99.7 2.8E-17 9.4E-22 122.4 11.5 120 20-141 90-237 (250)
185 3gkz_A Anti-methamphetamine si 99.7 1.9E-16 6.5E-21 118.5 16.0 119 21-140 87-235 (257)
186 2fbo_J V1V2;, variable region- 99.7 1.6E-16 5.4E-21 118.3 15.5 163 69-237 12-237 (250)
187 3uzq_A Anti-dengue MAB 4E11; d 99.7 8.6E-17 3E-21 120.1 13.9 119 21-140 81-230 (253)
188 3k0w_A Mucosa-associated lymph 99.7 1.7E-16 5.8E-21 115.8 15.1 146 69-238 28-190 (218)
189 3r4d_A CEA-related cell adhesi 99.7 6.3E-16 2.2E-20 111.8 17.8 174 69-254 9-203 (208)
190 2if7_A SLAM family member 6; N 99.7 1.6E-16 5.4E-21 113.7 13.9 116 14-145 64-184 (193)
191 3o4o_C Interleukin-1 receptor 99.7 1.3E-17 4.5E-22 129.8 8.8 145 1-146 160-328 (339)
192 1nkr_A P58-CL42 KIR; inhibitor 99.7 4.6E-17 1.6E-21 117.3 11.0 117 18-140 61-184 (201)
193 1vca_A VCAM-D1,2, human vascul 99.7 1.5E-15 5.3E-20 109.3 18.9 159 69-239 11-180 (202)
194 3u83_A Poliovirus receptor-rel 99.7 8.4E-17 2.9E-21 124.8 13.1 130 20-159 194-324 (331)
195 3pv7_A B7-H6, IG-like domain-c 99.7 6.1E-17 2.1E-21 120.5 11.5 131 20-153 82-224 (248)
196 1dr9_A B7-1 (CD80), T lymphocy 99.7 5.9E-16 2E-20 111.4 16.1 122 19-145 64-193 (201)
197 1nkr_A P58-CL42 KIR; inhibitor 99.7 6.6E-16 2.3E-20 111.2 16.3 170 69-248 17-199 (201)
198 1nqb_A Single-chain antibody f 99.7 4.3E-16 1.5E-20 116.5 15.8 120 20-140 79-219 (256)
199 3umt_A SCFV heavy chain and li 99.7 2.6E-16 9E-21 117.7 14.5 119 21-141 82-232 (256)
200 3ry4_A Low affinity immunoglob 99.7 2.3E-16 7.9E-21 110.5 13.3 144 69-238 14-159 (170)
201 3mj8_L Stimulatory hamster ant 99.7 3.3E-17 1.1E-21 119.1 9.2 125 20-145 70-205 (213)
202 1sy6_A T-cell surface glycopro 99.7 1.4E-17 4.6E-22 120.3 6.6 136 1-153 35-202 (204)
203 1hzh_H IGG, immunoglobulin hea 99.7 9.6E-18 3.3E-22 135.8 6.3 206 21-239 195-444 (457)
204 2ny1_B T-cell surface glycopro 99.7 1.2E-16 4.1E-21 113.4 11.3 159 69-249 5-179 (184)
205 4fmk_A Poliovirus receptor-rel 99.7 5.2E-16 1.8E-20 113.3 14.5 175 69-248 11-216 (225)
206 2ghw_B Anti-SARS SCFV antibody 99.7 5.4E-16 1.8E-20 115.3 14.7 118 21-140 82-228 (247)
207 2x1w_L Vascular endothelial gr 99.7 8.1E-16 2.8E-20 111.8 15.2 171 68-250 16-208 (213)
208 3eow_R Poliovirus receptor; im 99.7 6.9E-17 2.4E-21 118.1 9.5 135 19-161 77-216 (221)
209 3mj6_A Junctional adhesion mol 99.7 9.2E-16 3.1E-20 115.4 15.5 125 20-151 84-235 (268)
210 4fmk_A Poliovirus receptor-rel 99.7 2.1E-16 7.2E-21 115.4 11.7 135 18-155 81-219 (225)
211 3d9a_L Light chain of hyhel10 99.7 6.5E-17 2.2E-21 117.5 8.6 119 21-142 72-202 (213)
212 1lk3_L 9D7 light chain; antige 99.7 1.2E-16 4.1E-21 115.9 9.7 119 21-142 71-201 (210)
213 3mjg_X Beta-type platelet-deri 99.7 5.8E-16 2E-20 117.8 13.6 123 29-153 150-278 (289)
214 1f3r_B FV antibody fragment; I 99.7 1.1E-15 3.8E-20 114.3 14.9 118 21-140 79-232 (257)
215 3sbw_C Programmed cell death 1 99.7 5.2E-15 1.8E-19 108.1 18.1 172 69-248 11-210 (222)
216 2zg1_A Sialic acid-binding IG- 99.7 3.5E-16 1.2E-20 113.7 11.7 122 20-153 82-213 (214)
217 1dr9_A B7-1 (CD80), T lymphocy 99.7 2.6E-16 8.9E-21 113.3 10.8 167 69-240 4-192 (201)
218 1mq8_A ICAM-1, intercellular a 99.7 9.4E-17 3.2E-21 121.2 8.7 217 21-249 51-282 (291)
219 3b5h_A Cervical EMMPRIN, HAB18 99.7 6.7E-15 2.3E-19 104.3 17.7 162 69-248 8-182 (184)
220 2p1y_A Bispecific alpha/beta T 99.7 1.4E-15 4.7E-20 112.4 14.7 119 20-140 73-222 (238)
221 1zvo_C Myeloma immunoglobulin 99.7 6.9E-15 2.4E-19 120.7 20.2 124 20-145 80-224 (512)
222 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.3E-14 4.4E-19 108.4 20.0 160 69-237 13-234 (256)
223 3vh8_G Killer cell immunoglobu 99.7 5.2E-16 1.8E-20 119.6 12.5 173 51-238 17-199 (316)
224 4frw_A Poliovirus receptor-rel 99.7 4.1E-15 1.4E-19 108.0 16.3 174 69-248 9-210 (218)
225 4i0k_A CD276 antigen; immunogl 99.7 2.9E-16 9.8E-21 114.8 10.1 132 19-158 71-209 (222)
226 3rjd_A High affinity immunoglo 99.7 1.6E-15 5.5E-20 113.6 13.9 154 69-248 11-166 (262)
227 3juy_B 3B3 single chain varian 99.7 2.5E-15 8.7E-20 112.3 14.8 119 21-140 86-243 (256)
228 3auv_A SC-DSFV derived from th 99.7 1.8E-15 6.3E-20 114.3 14.0 119 21-139 83-235 (276)
229 1q0x_L FAB 9B1, light chain; a 99.7 7.1E-16 2.4E-20 112.0 11.1 121 21-144 74-206 (212)
230 2pet_A Lutheran blood group gl 99.7 8.5E-16 2.9E-20 112.9 11.5 121 16-139 73-211 (231)
231 2xzc_L FAB A.17 light chain; i 99.7 5E-16 1.7E-20 113.1 10.1 119 21-142 73-204 (216)
232 2oz4_A Intercellular adhesion 99.7 1.6E-15 5.5E-20 113.9 13.0 117 20-151 142-262 (265)
233 3d9a_L Light chain of hyhel10 99.7 2.2E-15 7.6E-20 109.4 13.3 164 69-239 11-203 (213)
234 3knb_B Obscurin-like protein 1 99.7 2.2E-15 7.4E-20 96.8 11.6 95 57-157 12-107 (107)
235 1b6u_A KIR2DL3, P58 killer cel 99.7 2.7E-15 9.2E-20 111.9 13.8 183 58-252 7-202 (257)
236 1jbj_A CD3 epsilon and gamma e 99.7 3.4E-16 1.2E-20 111.3 8.5 142 71-239 11-179 (186)
237 1igy_B IGG1 intact antibody MA 99.7 4.6E-18 1.6E-22 136.8 -1.5 210 20-238 180-424 (434)
238 3auv_A SC-DSFV derived from th 99.7 8E-15 2.8E-19 110.8 16.3 161 69-236 22-236 (276)
239 3esu_F Antibody 14B7* light ch 99.7 5.4E-15 1.9E-19 110.1 15.2 116 21-138 75-231 (250)
240 3fku_X Neutralizing antibody F 99.7 3.7E-15 1.3E-19 112.9 14.4 118 21-140 80-234 (280)
241 3ux9_B SCFV antibody; five hel 99.6 3.6E-15 1.2E-19 111.5 14.0 118 21-140 75-236 (256)
242 3tv3_L PGT128 light chain, IG 99.6 2.1E-16 7.2E-21 114.7 6.7 125 20-145 68-203 (211)
243 2znx_A SCFV; fluorotryptohpan, 99.6 1.8E-14 6.1E-19 106.8 17.2 166 69-240 11-227 (242)
244 1mju_H Immunoglobulin MS6-12; 99.6 4.5E-16 1.6E-20 114.2 8.5 135 20-159 79-221 (227)
245 2znx_A SCFV; fluorotryptohpan, 99.6 4.2E-15 1.4E-19 110.2 13.6 118 21-139 72-222 (242)
246 2zg1_A Sialic acid-binding IG- 99.6 1.7E-14 5.7E-19 104.8 16.5 174 69-247 10-211 (214)
247 2wng_A Tyrosine-protein phosph 99.6 4.8E-16 1.7E-20 120.4 8.8 141 1-145 154-311 (327)
248 2c1o_A IGK-C protein; FAB frag 99.6 6.7E-16 2.3E-20 115.3 9.3 119 21-142 114-244 (254)
249 3mj8_L Stimulatory hamster ant 99.6 4.7E-15 1.6E-19 107.7 13.4 163 69-239 10-203 (213)
250 1n26_A IL-6 receptor alpha cha 99.6 2E-14 6.7E-19 111.2 17.6 160 69-240 16-183 (325)
251 1svz_A Immunoglobulin;, single 99.6 5.3E-15 1.8E-19 109.9 13.9 117 21-139 77-228 (247)
252 3pv7_A B7-H6, IG-like domain-c 99.6 2.6E-15 8.9E-20 111.7 12.1 174 69-248 13-223 (248)
253 1nqb_A Single-chain antibody f 99.6 7.4E-15 2.5E-19 109.7 14.6 162 69-236 10-219 (256)
254 1f3r_B FV antibody fragment; I 99.6 1.9E-14 6.4E-19 107.7 16.6 163 69-236 10-232 (257)
255 2p1y_A Bispecific alpha/beta T 99.6 2.7E-14 9.4E-19 105.4 17.2 159 69-236 10-222 (238)
256 2ghw_B Anti-SARS SCFV antibody 99.6 2.8E-14 9.6E-19 106.0 17.3 162 69-236 12-228 (247)
257 1moe_A Anti-CEA MAB T84.66; an 99.6 7.9E-15 2.7E-19 108.5 14.3 117 21-138 76-219 (240)
258 1hnf_A CD2; T lymphocyte adhes 99.6 6E-15 2.1E-19 104.1 12.9 158 69-245 9-177 (182)
259 1qok_A MFE-23 recombinant anti 99.6 8.3E-15 2.8E-19 111.1 14.5 118 20-140 105-254 (282)
260 2dru_A Chimera of CD48 antigen 99.6 5.2E-15 1.8E-19 104.5 12.5 154 69-242 9-174 (180)
261 3esu_F Antibody 14B7* light ch 99.6 4.5E-14 1.6E-18 105.0 18.3 157 69-234 14-231 (250)
262 3sob_L Antibody light chain; b 99.6 5.4E-16 1.9E-20 114.5 7.7 122 20-142 94-225 (237)
263 3nl4_L Antigen binding fragmen 99.6 2.3E-15 7.7E-20 109.3 10.8 112 21-137 72-198 (213)
264 3omz_A Human vdelta1 gamma del 99.6 1.9E-14 6.4E-19 107.7 15.9 160 69-235 12-231 (259)
265 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 4.3E-15 1.5E-19 111.0 12.3 120 21-143 77-236 (256)
266 2if7_A SLAM family member 6; N 99.6 4.4E-15 1.5E-19 106.2 11.9 154 69-239 8-182 (193)
267 3r06_A Anti-mouse CD3epsilon a 99.6 1.1E-15 3.7E-20 111.1 8.8 118 21-141 72-201 (213)
268 3s96_B 3B5H10 FAB light chain; 99.6 5.3E-16 1.8E-20 113.1 7.1 125 20-145 75-212 (218)
269 3knb_A Titin; IG-like, titin, 99.6 1.8E-14 6.1E-19 91.4 13.2 92 57-151 4-97 (100)
270 3omz_A Human vdelta1 gamma del 99.6 5.7E-15 2E-19 110.6 12.4 118 20-138 79-230 (259)
271 1lk3_L 9D7 light chain; antige 99.6 1.2E-14 4.1E-19 105.3 13.7 164 69-239 10-202 (210)
272 3d85_D IL-12B, interleukin-12 99.6 7.8E-14 2.7E-18 106.5 18.6 215 18-248 49-304 (306)
273 2dru_A Chimera of CD48 antigen 99.6 4E-15 1.4E-19 105.1 10.5 112 13-145 61-173 (180)
274 2gjj_A A21 single-chain antibo 99.6 1.4E-14 4.8E-19 108.7 14.1 118 21-139 82-239 (264)
275 2gki_A Nuclease; anti-DNA anti 99.6 1.2E-14 4.1E-19 110.7 13.8 120 20-140 101-258 (291)
276 4i0k_A CD276 antigen; immunogl 99.6 2.6E-15 8.9E-20 109.7 9.3 176 69-251 5-208 (222)
277 3ux9_B SCFV antibody; five hel 99.6 6.3E-14 2.1E-18 104.7 16.8 162 69-235 12-235 (256)
278 1ccz_A Protein (CD58); LFA-3, 99.6 6.5E-15 2.2E-19 103.1 10.4 152 69-244 5-166 (171)
279 1zvo_C Myeloma immunoglobulin 99.6 8.2E-14 2.8E-18 114.3 18.6 165 71-242 309-496 (512)
280 3gkz_A Anti-methamphetamine si 99.6 1.1E-13 3.7E-18 103.5 17.7 159 69-235 18-234 (257)
281 1svz_A Immunoglobulin;, single 99.6 6.7E-14 2.3E-18 104.0 16.4 161 69-235 11-228 (247)
282 1ccz_A Protein (CD58); LFA-3, 99.6 7.1E-15 2.4E-19 102.9 10.5 107 18-146 58-164 (171)
283 1c1e_H Catalytic antibody 1E9 99.6 4.8E-15 1.7E-19 108.1 10.0 123 20-145 79-212 (219)
284 3bkj_L WO2 IGG2A FAB fragment 99.6 1.8E-15 6.1E-20 112.9 7.8 119 21-142 110-240 (252)
285 2cqv_A MLCK, myosin light chai 99.6 5E-14 1.7E-18 91.8 13.6 99 58-161 7-105 (114)
286 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 4.3E-15 1.5E-19 108.6 9.4 123 20-145 81-215 (222)
287 3umt_A SCFV heavy chain and li 99.6 7.3E-14 2.5E-18 104.3 16.2 160 69-236 12-231 (256)
288 2xzc_L FAB A.17 light chain; i 99.6 2.4E-14 8.3E-19 104.1 13.2 164 69-239 10-205 (216)
289 2q7n_A Leukemia inhibitory fac 99.6 5.7E-14 1.9E-18 113.4 16.4 235 2-250 236-485 (488)
290 3s96_B 3B5H10 FAB light chain; 99.6 9.5E-15 3.3E-19 106.4 10.7 165 69-239 10-210 (218)
291 1nfd_E H57 FAB; complex (immun 99.6 9.2E-16 3.2E-20 111.3 5.2 121 21-142 70-201 (212)
292 3r06_A Anti-mouse CD3epsilon a 99.6 4.8E-14 1.6E-18 102.3 14.2 164 69-239 11-203 (213)
293 3eow_R Poliovirus receptor; im 99.6 2.6E-15 8.8E-20 109.7 7.5 174 69-248 9-211 (221)
294 3nl4_L Antigen binding fragmen 99.6 7.9E-14 2.7E-18 101.1 15.0 157 69-233 11-198 (213)
295 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 2.6E-14 9E-19 107.5 12.8 119 21-139 91-254 (268)
296 1pz5_B Heavy chain of FAB (SYA 99.6 5.5E-15 1.9E-19 107.9 8.8 120 21-145 82-213 (220)
297 3qib_D 2B4 beta chain; IG doma 99.6 2E-14 6.8E-19 108.3 12.1 200 27-241 3-247 (270)
298 3d9a_H Heavy chain of hyhel10 99.6 7.3E-15 2.5E-19 106.5 9.2 120 21-145 79-206 (210)
299 1q0x_L FAB 9B1, light chain; a 99.6 3.1E-14 1.1E-18 103.2 12.4 164 69-238 10-204 (212)
300 3tv3_L PGT128 light chain, IG 99.6 2.8E-14 9.5E-19 103.4 11.9 162 69-238 10-200 (211)
301 1moe_A Anti-CEA MAB T84.66; an 99.6 2.5E-13 8.6E-18 100.3 17.3 161 69-235 11-220 (240)
302 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 2.5E-14 8.4E-19 104.6 11.4 165 69-240 10-214 (222)
303 1gsm_A Madcam-1, mucosal addre 99.6 3.6E-14 1.2E-18 101.6 11.7 123 19-145 58-197 (210)
304 2fbj_H IGA-kappa J539 FAB (hea 99.6 4.6E-14 1.6E-18 103.0 12.7 123 20-144 79-212 (220)
305 2j6e_L IGM, FAB light chain; a 99.6 2.1E-15 7.1E-20 111.2 5.3 120 21-143 92-225 (234)
306 3sob_L Antibody light chain; b 99.6 1.1E-13 3.9E-18 101.9 14.8 165 69-241 34-228 (237)
307 1nfd_E H57 FAB; complex (immun 99.6 2.5E-15 8.6E-20 109.0 5.6 164 69-238 9-201 (212)
308 3uzq_A Anti-dengue MAB 4E11; d 99.6 2.5E-13 8.5E-18 101.3 16.6 163 69-237 11-231 (253)
309 3juy_B 3B3 single chain varian 99.6 2.1E-13 7.3E-18 101.8 16.2 161 69-236 16-243 (256)
310 1qok_A MFE-23 recombinant anti 99.6 1.7E-13 5.7E-18 103.9 15.5 159 69-235 36-253 (282)
311 1c1e_H Catalytic antibody 1E9 99.6 1.2E-13 4.1E-18 100.7 14.0 167 69-240 10-211 (219)
312 2j6e_L IGM, FAB light chain; a 99.6 7E-14 2.4E-18 102.9 12.8 165 69-238 29-224 (234)
313 3bqu_C 3H6 FAB light chain; be 99.6 1.6E-15 5.5E-20 111.7 3.7 119 20-141 93-223 (233)
314 2kdg_A Myotilin; immonoglobuli 99.6 1.5E-13 5.3E-18 87.2 12.5 92 57-152 4-97 (100)
315 2pet_A Lutheran blood group gl 99.5 3.3E-14 1.1E-18 104.4 10.5 161 69-236 10-212 (231)
316 3o3u_N Maltose-binding peripla 99.5 3.1E-14 1.1E-18 118.6 11.5 125 12-142 424-566 (581)
317 2fbj_H IGA-kappa J539 FAB (hea 99.5 5.8E-13 2E-17 97.1 16.8 165 69-240 10-212 (220)
318 1dee_B IGM RF 2A2; FAB-IBP com 99.5 1.9E-13 6.4E-18 100.0 14.1 122 20-145 79-219 (223)
319 3nl4_H Antigen binding fragmen 99.5 3E-14 1E-18 103.6 9.8 122 21-145 76-206 (215)
320 3liz_H 4C3 monoclonal antibody 99.5 4.5E-14 1.6E-18 105.3 11.0 120 21-145 80-212 (253)
321 3bae_H WO2 IGG2A FAB fragment 99.5 3.1E-14 1.1E-18 104.5 9.8 123 20-145 80-218 (228)
322 1dn0_B IGM-kappa cold agglutin 99.5 1.8E-13 6.1E-18 100.7 13.8 125 21-146 79-220 (232)
323 3bkj_L WO2 IGG2A FAB fragment 99.5 5.4E-14 1.8E-18 104.8 11.1 165 69-239 44-241 (252)
324 3kvq_A Vascular endothelial gr 99.5 3.4E-14 1.2E-18 91.6 8.7 102 51-159 3-104 (108)
325 2gjj_A A21 single-chain antibo 99.5 9.7E-13 3.3E-17 98.7 17.8 161 69-235 15-239 (264)
326 1op3_H FAB 2G12, heavy chain; 99.5 2.9E-14 9.9E-19 104.4 9.0 120 20-142 79-214 (225)
327 1u2h_A APEG-1, aortic preferen 99.5 3E-13 1E-17 85.6 12.6 90 58-151 5-96 (99)
328 1wit_A Twitchin 18TH IGSF modu 99.5 2E-13 6.8E-18 85.4 11.5 89 58-149 2-90 (93)
329 1g1c_A Immunoglobulin-like dom 99.5 3.5E-13 1.2E-17 85.3 12.7 90 58-151 5-96 (99)
330 3qp3_A Titin; I-SET IG-like, s 99.5 1.2E-13 4E-18 88.2 10.6 94 56-152 6-99 (103)
331 2dm3_A KIAA0992 protein, palla 99.5 3.5E-14 1.2E-18 91.9 8.1 99 58-161 9-108 (110)
332 2gki_A Nuclease; anti-DNA anti 99.5 1.4E-12 4.8E-17 99.2 18.3 161 69-235 32-257 (291)
333 2e7c_A Myosin-binding protein 99.5 2.8E-13 9.7E-18 88.7 12.5 98 55-157 18-117 (118)
334 3m8o_H Immunoglobulin A1 heavy 99.5 1.7E-13 6E-18 100.0 12.5 119 21-144 82-214 (221)
335 2vol_A Murine IGG FC; FC, zinc 99.5 9.5E-15 3.2E-19 105.6 5.6 119 20-141 68-196 (207)
336 1sy6_A T-cell surface glycopro 99.5 1.9E-14 6.6E-19 103.7 6.6 150 71-247 15-200 (204)
337 2dm2_A Palladin; beta-sandwich 99.5 1.6E-13 5.5E-18 88.7 10.2 98 58-161 8-108 (110)
338 1mju_H Immunoglobulin MS6-12; 99.5 3.3E-13 1.1E-17 98.9 13.0 172 69-248 10-216 (227)
339 4dzb_B Vbeta2 (MAIT T cell rec 99.5 5.2E-13 1.8E-17 99.1 13.6 166 69-240 11-222 (246)
340 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 9.5E-13 3.3E-17 99.0 15.2 163 69-235 25-254 (268)
341 2kkq_A Myotilin; unknown funct 99.5 2.9E-13 1E-17 88.3 10.8 97 57-159 14-113 (116)
342 3pl6_D MBP peptide / T-cell re 99.5 4.3E-14 1.5E-18 106.3 7.8 119 19-142 99-241 (268)
343 1pz5_B Heavy chain of FAB (SYA 99.5 2.5E-13 8.6E-18 99.0 11.6 164 69-239 10-211 (220)
344 3puc_A Titin; I-SET IG-like do 99.5 7.9E-13 2.7E-17 83.6 12.4 93 57-152 5-97 (99)
345 3mtr_A N-CAM-1, NCAM-1, neural 99.5 2.4E-13 8.1E-18 98.8 11.2 143 1-150 53-206 (215)
346 2rgs_A I, IG gamma-2B heavy ch 99.5 1.3E-14 4.6E-19 105.7 4.4 120 20-141 76-204 (218)
347 3d9a_H Heavy chain of hyhel10 99.5 2.1E-13 7.1E-18 98.7 10.6 165 69-240 10-205 (210)
348 1dee_B IGM RF 2A2; FAB-IBP com 99.5 3.6E-12 1.2E-16 93.1 17.3 168 69-240 10-218 (223)
349 3fku_X Neutralizing antibody F 99.5 9.1E-13 3.1E-17 99.7 14.3 164 69-236 10-234 (280)
350 4ei6_B Vbeta16 XV19 type II na 99.5 8.3E-14 2.8E-18 103.3 8.5 118 21-141 77-218 (245)
351 3irg_B Obscurin-like protein 1 99.5 5.2E-13 1.8E-17 85.8 11.1 94 57-157 12-107 (107)
352 1gsm_A Madcam-1, mucosal addre 99.5 2.3E-12 7.9E-17 92.2 15.4 156 69-238 17-194 (210)
353 1op3_H FAB 2G12, heavy chain; 99.5 3.6E-13 1.2E-17 98.6 11.6 163 69-238 10-214 (225)
354 1hxm_B Gamma-delta T-cell rece 99.5 2.3E-13 7.9E-18 100.8 10.5 124 20-145 80-221 (242)
355 4dzb_B Vbeta2 (MAIT T cell rec 99.5 7.3E-14 2.5E-18 103.7 7.8 119 21-142 78-220 (246)
356 2yr3_A Myosin light chain kina 99.5 3.5E-13 1.2E-17 85.3 9.7 89 55-149 8-96 (99)
357 3nfj_J T cell receptor beta ch 99.5 7.4E-14 2.5E-18 103.6 6.7 119 21-142 75-219 (245)
358 1fhg_A Telokin; immunoglobulin 99.5 7.1E-13 2.4E-17 91.1 11.1 97 51-152 34-133 (154)
359 1hxm_B Gamma-delta T-cell rece 99.5 5.9E-12 2E-16 93.1 16.8 170 69-247 11-227 (242)
360 3nl4_H Antigen binding fragmen 99.5 1.4E-12 4.9E-17 94.7 13.2 169 69-243 9-208 (215)
361 1c5d_H Monoclonal antibody aga 99.5 3.1E-13 1E-17 98.3 9.3 121 21-145 79-208 (215)
362 3qhz_H Human monoclonal antibo 99.5 4.2E-13 1.4E-17 98.7 10.1 122 21-145 84-221 (232)
363 2xqy_G A13-D6.3 monoclonal ant 99.5 5.6E-13 1.9E-17 99.7 10.9 120 20-142 85-214 (261)
364 2kbg_A N-CAM 2, neural cell ad 99.5 6.3E-13 2.2E-17 85.6 9.6 92 155-249 7-100 (114)
365 3q5y_A TCR N15 beta; IG, T cel 99.5 1.4E-13 4.9E-18 101.7 7.6 120 21-142 76-213 (240)
366 3caf_A Fibroblast growth facto 99.5 1.2E-12 4E-17 83.1 10.8 81 68-149 17-97 (100)
367 3irg_A Titin; IG-like, titin, 99.5 4E-12 1.4E-16 80.5 13.3 91 58-151 5-97 (100)
368 3bn9_D E2 FAB heavy chain; ant 99.5 2E-13 6.7E-18 101.9 8.2 120 20-142 79-219 (257)
369 3bqu_C 3H6 FAB light chain; be 99.4 7E-14 2.4E-18 102.9 5.6 164 69-239 33-225 (233)
370 3bae_H WO2 IGG2A FAB fragment 99.4 6.5E-13 2.2E-17 97.4 10.7 167 69-241 10-218 (228)
371 1dn0_B IGM-kappa cold agglutin 99.4 4.5E-12 1.5E-16 93.2 15.1 173 69-247 10-225 (232)
372 3qib_D 2B4 beta chain; IG doma 99.4 1.1E-13 3.9E-18 104.1 6.4 120 20-142 101-244 (270)
373 3m8o_H Immunoglobulin A1 heavy 99.4 4.3E-12 1.5E-16 92.5 14.5 165 69-239 10-213 (221)
374 1za6_B IGG heavy chain; immuno 99.4 6.6E-13 2.3E-17 103.5 10.6 165 69-239 10-207 (344)
375 1wwb_X Protein (brain derived 99.4 1.4E-12 4.7E-17 83.1 10.2 82 72-158 14-101 (103)
376 2dav_A SLOW MYBP-C, myosin-bin 99.4 3.3E-12 1.1E-16 83.5 12.0 90 69-161 17-118 (126)
377 2wqr_A IG epsilon chain C regi 99.4 1.3E-13 4.4E-18 106.6 6.1 118 19-142 177-309 (323)
378 3l5h_A Interleukin-6 receptor 99.4 2E-13 6.7E-18 114.0 7.6 230 1-250 45-299 (589)
379 2yuz_A Myosin-binding protein 99.4 1E-12 3.5E-17 83.2 8.9 91 59-158 8-98 (100)
380 2edj_A Roundabout homolog 2; K 99.4 1.5E-12 5.1E-17 82.5 9.8 89 58-151 8-96 (100)
381 3n9g_H FAB fragment of MAB CR4 99.4 1E-12 3.5E-17 96.5 10.1 121 21-145 80-217 (230)
382 3cx2_A Myosin-binding protein 99.4 5E-12 1.7E-16 81.3 12.2 81 69-151 14-106 (108)
383 1v5j_A KIAA1355 protein, RSGI 99.4 6E-13 2.1E-17 84.9 7.7 96 155-253 6-103 (108)
384 3fl7_A Ephrin receptor; ATP-bi 99.4 9.3E-13 3.2E-17 107.2 10.6 219 28-252 303-534 (536)
385 2w59_A IGY FCU3-4; immunoglobu 99.4 1.1E-13 3.8E-18 101.7 4.5 118 21-142 78-217 (231)
386 3shs_A HOC head outer capsid p 99.4 4.4E-10 1.5E-14 81.8 22.8 200 20-233 52-278 (304)
387 1gxe_A Myosin binding protein 99.4 1.7E-12 5.8E-17 87.1 9.7 83 68-153 27-137 (139)
388 2bk8_A Connectin, M1, titin he 99.4 9.2E-12 3.2E-16 78.4 12.6 81 69-151 11-92 (97)
389 3nfj_J T cell receptor beta ch 99.4 1.4E-11 4.7E-16 91.3 15.4 166 69-240 11-221 (245)
390 1he7_A High affinity nerve gro 99.4 7.5E-12 2.6E-16 81.7 11.7 82 73-159 14-103 (126)
391 2wbj_D OB TCR; transmembrane, 99.4 1.5E-12 5E-17 98.5 9.2 119 21-142 101-245 (279)
392 3tv3_H PGT128 heavy chain, IG 99.4 1.2E-12 4.2E-17 96.7 8.5 122 21-145 87-229 (239)
393 2cry_A KIN of IRRE-like protei 99.4 4.9E-14 1.7E-18 92.9 0.7 102 48-155 4-113 (122)
394 2vkw_A Neural cell adhesion mo 99.4 2.2E-11 7.4E-16 88.0 14.6 134 117-252 68-204 (209)
395 2eo9_A Roundabout homolog 1; b 99.4 5.5E-12 1.9E-16 82.5 10.4 91 58-153 8-98 (118)
396 3o3u_N Maltose-binding peripla 99.4 9.1E-12 3.1E-16 103.8 14.3 166 69-242 376-570 (581)
397 2xqy_G A13-D6.3 monoclonal ant 99.4 1.2E-11 4E-16 92.6 13.4 164 69-238 16-214 (261)
398 2wbj_D OB TCR; transmembrane, 99.4 4E-11 1.4E-15 90.6 16.3 166 69-240 34-247 (279)
399 1wwc_A Protein (NT-3 growth fa 99.4 5.2E-12 1.8E-16 82.6 10.0 98 52-158 2-104 (118)
400 1nct_A Titin; cell adhesion, g 99.4 1.7E-12 5.6E-17 83.2 7.3 79 69-149 24-102 (106)
401 1i1c_A IGG2A, IG gamma-2A chai 99.4 2.7E-13 9.3E-18 100.1 4.0 120 20-141 82-210 (239)
402 2edf_A Obscurin; beta-sandwich 99.4 4.1E-12 1.4E-16 81.0 9.0 93 59-161 9-101 (103)
403 3u2s_H PG9 heavy chain; greek 99.4 2.1E-12 7.2E-17 95.9 8.7 120 21-145 79-230 (248)
404 1l6x_A Immunoglobulin gamma-1 99.4 4.2E-13 1.5E-17 96.9 4.8 138 1-141 42-196 (207)
405 3pl6_D MBP peptide / T-cell re 99.4 2.3E-11 7.8E-16 91.4 14.5 165 69-240 36-243 (268)
406 4ei6_B Vbeta16 XV19 type II na 99.4 1.6E-11 5.6E-16 90.9 13.3 165 69-240 12-221 (245)
407 1ypz_E T cell receptor delta, 99.4 1.8E-11 6.2E-16 88.3 13.1 160 69-239 11-199 (207)
408 3l5h_A Interleukin-6 receptor 99.4 2.1E-13 7.3E-18 113.8 3.3 167 69-242 13-187 (589)
409 2q7n_A Leukemia inhibitory fac 99.4 1.1E-11 3.9E-16 100.1 13.1 155 69-240 213-374 (488)
410 1bec_A 14.3.D T cell antigen r 99.4 2.2E-12 7.4E-17 95.3 8.3 119 20-140 72-210 (238)
411 1waa_A Titin; metal binding pr 99.4 1.3E-11 4.5E-16 76.9 10.4 77 59-139 6-82 (93)
412 1z9m_A GAPA225; nectin-like, I 99.4 7.6E-12 2.6E-16 85.0 10.1 120 37-160 16-143 (145)
413 2lu7_A Obscurin-like protein 1 99.4 3.9E-12 1.3E-16 77.5 7.8 68 69-139 6-73 (84)
414 1x4z_A Biregional cell adhesio 99.3 2.6E-11 8.9E-16 79.6 12.3 100 152-253 13-117 (121)
415 1ypz_F T-cell receptor gamma c 99.3 3.3E-12 1.1E-16 93.8 8.6 120 21-142 80-216 (230)
416 1x4x_A Fibronectin type-III do 99.3 1.4E-11 4.7E-16 78.9 10.4 97 154-254 5-102 (106)
417 3to4_D NKT vbeta2 (mouse varia 99.3 1.7E-12 5.8E-17 96.8 7.0 117 22-140 76-217 (253)
418 1c5d_H Monoclonal antibody aga 99.3 8.4E-12 2.9E-16 90.6 10.4 164 69-240 10-207 (215)
419 2ckn_A Basic fibroblast growth 99.3 1.6E-11 5.6E-16 76.9 10.4 74 69-149 19-92 (95)
420 2lvc_A Obscurin-like protein 1 99.3 6.3E-12 2.2E-16 77.9 8.3 79 58-139 4-83 (91)
421 2eny_A Obscurin; beta-sandwich 99.3 5.6E-12 1.9E-16 80.4 8.2 76 61-138 11-86 (104)
422 3sob_H Antibody heavy chain, l 99.3 6.8E-12 2.3E-16 93.6 9.9 121 21-145 103-243 (256)
423 1oga_E TRBC1, T-cell receptor 99.3 2.9E-12 9.8E-17 95.4 7.7 120 20-142 76-218 (252)
424 1iam_A ICAM-1, CD54, intercell 99.3 1.2E-11 4.1E-16 86.6 10.3 114 21-141 51-166 (185)
425 3q5y_A TCR N15 beta; IG, T cel 99.3 1.4E-11 4.7E-16 91.0 11.2 165 69-240 12-215 (240)
426 1x44_A Myosin-binding protein 99.3 1.1E-11 3.7E-16 79.0 9.3 83 69-160 17-101 (103)
427 2djs_A Ephrin type-B receptor 99.3 2.2E-11 7.4E-16 78.3 10.8 96 155-252 6-102 (108)
428 1gl4_B Basement membrane-speci 99.3 4.9E-11 1.7E-15 75.1 12.2 76 69-151 20-96 (98)
429 2edn_A Myosin-binding protein 99.3 7.1E-12 2.4E-16 81.0 8.3 82 69-152 22-115 (118)
430 3mlr_H Human monoclonal anti-H 99.3 7.9E-12 2.7E-16 91.5 9.5 120 21-144 80-217 (226)
431 3liz_H 4C3 monoclonal antibody 99.3 1.3E-11 4.4E-16 91.9 10.6 174 69-248 10-219 (253)
432 3r8q_A Fibronectin; heparin, F 99.3 5.1E-09 1.7E-13 79.4 25.2 210 20-243 74-285 (290)
433 1uey_A KIAA0343 protein; immun 99.3 9.9E-12 3.4E-16 82.4 8.8 104 148-254 8-116 (127)
434 2vol_A Murine IGG FC; FC, zinc 99.3 1E-11 3.5E-16 89.6 9.6 160 71-238 15-197 (207)
435 1bqu_A Protein (GP130); cytoki 99.3 2.6E-10 9E-15 82.6 16.9 131 117-251 62-205 (215)
436 3iu4_H CHP3 FAB heavy chain; a 99.3 4.1E-12 1.4E-16 95.1 7.4 121 21-145 79-216 (263)
437 3m45_A Cell adhesion molecule 99.3 2.5E-11 8.4E-16 77.9 10.2 81 69-151 16-104 (108)
438 1x3d_A Fibronectin type-III do 99.3 3.1E-11 1.1E-15 78.9 10.7 98 154-254 15-114 (118)
439 3bfo_A Mucosa-associated lymph 99.3 3.3E-11 1.1E-15 74.8 10.3 73 69-153 13-85 (91)
440 1bpv_A Titin, A71, connectin; 99.3 2.3E-11 7.8E-16 78.5 9.8 91 155-249 9-105 (112)
441 3bn9_D E2 FAB heavy chain; ant 99.3 9.8E-12 3.3E-16 92.7 9.1 164 69-238 10-219 (257)
442 2e7h_A Ephrin type-B receptor 99.3 2.8E-11 9.7E-16 77.8 10.1 96 155-252 6-103 (109)
443 2ed7_A Netrin receptor DCC; tu 99.3 6.8E-11 2.3E-15 77.3 12.1 96 154-251 15-112 (119)
444 2edh_A Obscurin; structural ge 99.3 2.2E-11 7.7E-16 78.9 9.6 100 48-158 8-108 (113)
445 2yuv_A Myosin-binding protein 99.3 3.9E-11 1.3E-15 75.9 10.5 90 59-157 8-97 (100)
446 2e6p_A Obscurin-like protein 1 99.3 1.1E-11 3.8E-16 79.1 7.9 83 69-160 20-102 (104)
447 3f8u_B Tapasin; endoplasmic re 99.3 2.1E-11 7.1E-16 95.0 10.8 123 17-140 251-388 (401)
448 2cr3_A Basic fibroblast growth 99.3 5.5E-11 1.9E-15 75.1 11.0 83 69-160 13-95 (99)
449 1wf5_A Sidekick 2 protein; FNI 99.3 2.4E-11 8E-16 79.8 9.5 103 149-253 10-117 (121)
450 3f7q_A Integrin beta-4, GP150; 99.3 1.1E-09 3.8E-14 80.4 19.2 136 116-253 57-201 (234)
451 2rgs_A I, IG gamma-2B heavy ch 99.3 1.2E-11 4E-16 90.0 8.5 162 71-240 23-207 (218)
452 1x5x_A Fibronectin type-III do 99.3 4.8E-11 1.6E-15 76.8 10.3 96 155-252 6-103 (109)
453 2yuw_A Myosin binding protein 99.3 1E-10 3.5E-15 75.4 11.9 95 154-252 5-105 (110)
454 1wis_A KIAA1514 protein; FNIII 99.3 2.6E-11 9E-16 79.9 9.2 97 154-252 15-119 (124)
455 2dlt_A Myosin binding protein 99.3 2.3E-11 8E-16 77.8 8.6 77 59-139 9-85 (106)
456 1x5j_A Neogenin; RGM binding, 99.3 5.2E-11 1.8E-15 77.0 10.0 99 155-255 7-111 (113)
457 2yux_A Myosin-binding protein 99.3 1.7E-11 5.7E-16 80.4 7.8 98 148-247 9-108 (120)
458 2ibg_A CG9211-PA, GH03927P; IH 99.3 3E-09 1E-13 76.9 20.5 134 116-251 69-212 (214)
459 3l5i_A Interleukin-6 receptor 99.3 2.2E-09 7.4E-14 81.5 20.4 219 24-250 65-289 (290)
460 1uem_A KIAA1568 protein; immun 99.3 5.7E-11 1.9E-15 77.5 10.0 100 152-254 11-114 (117)
461 2aty_A Complement receptor chi 99.3 2.1E-11 7E-16 96.2 9.2 120 20-141 233-361 (376)
462 3tv3_H PGT128 heavy chain, IG 99.3 4.6E-11 1.6E-15 88.2 10.6 172 69-245 10-233 (239)
463 3so5_A LIG-3, leucine-rich rep 99.3 7.5E-11 2.6E-15 76.1 10.4 90 57-149 9-109 (112)
464 3p4l_A Neogenin; iron homeosta 99.3 1.8E-09 6.1E-14 78.0 18.8 135 116-252 63-205 (211)
465 1x5f_A Neogenin; RGM binding, 99.3 9.3E-11 3.2E-15 76.8 10.9 96 154-251 15-113 (120)
466 2ed8_A Netrin receptor DCC; tu 99.3 8.5E-11 2.9E-15 75.2 10.4 95 155-253 6-101 (106)
467 3n9g_H FAB fragment of MAB CR4 99.3 1.5E-10 5.3E-15 84.8 13.2 171 69-248 10-224 (230)
468 2yrz_A Integrin beta-4; GP150, 99.3 1.8E-10 6.1E-15 75.2 12.1 98 154-253 15-114 (118)
469 2v9t_A Roundabout homolog 1; s 99.2 2.2E-11 7.6E-16 79.4 7.6 86 57-146 8-101 (117)
470 1oga_E TRBC1, T-cell receptor 99.2 3.8E-10 1.3E-14 83.9 15.2 165 69-240 13-220 (252)
471 2crz_A Fibronectin type-III do 99.2 5.4E-11 1.8E-15 76.7 9.2 98 154-254 6-106 (110)
472 3s35_X Vascular endothelial gr 99.2 1.3E-10 4.5E-15 76.3 11.3 87 69-157 18-112 (122)
473 2crm_A Fibronectin type-III do 99.2 1.3E-10 4.4E-15 76.1 11.1 98 154-254 15-116 (120)
474 1x5l_A Ephrin type-A receptor 99.2 4.3E-11 1.5E-15 77.2 8.7 96 155-252 9-105 (111)
475 2ens_A Advanced glycosylation 99.2 7E-12 2.4E-16 78.8 4.8 75 69-154 20-94 (96)
476 2cr6_A KIAA1556 protein, obscu 99.2 6.3E-12 2.1E-16 81.8 4.7 95 50-152 4-101 (115)
477 1wfu_A Unnamed protein product 99.2 2.5E-11 8.5E-16 79.0 7.4 98 151-252 10-114 (120)
478 3to4_D NKT vbeta2 (mouse varia 99.2 8.1E-11 2.8E-15 87.6 11.2 162 69-237 11-218 (253)
479 2dm4_A Sortilin-related recept 99.2 1.1E-10 3.8E-15 74.9 10.4 95 155-253 6-103 (108)
480 1cfb_A Drosophila neuroglian; 99.2 3.2E-09 1.1E-13 76.3 19.3 130 118-250 64-202 (205)
481 1ypz_E T cell receptor delta, 99.2 1.3E-10 4.3E-15 83.8 11.7 117 20-143 71-199 (207)
482 1bec_A 14.3.D T cell antigen r 99.2 2.5E-10 8.5E-15 84.2 13.5 122 69-195 9-160 (238)
483 2edk_A Myosin-binding protein 99.2 1.4E-11 4.7E-16 78.2 5.8 76 59-138 9-88 (101)
484 1ow0_A IG alpha-1 chain C regi 99.2 1.4E-12 4.9E-17 94.6 1.4 122 19-141 65-199 (214)
485 3qhz_H Human monoclonal antibo 99.2 5.6E-11 1.9E-15 87.3 9.8 172 69-246 10-226 (232)
486 2dju_A Receptor-type tyrosine- 99.2 2.6E-10 8.8E-15 72.9 11.8 97 154-254 5-102 (106)
487 2edd_A Netrin receptor DCC; tu 99.2 1.2E-10 4.1E-15 76.5 10.3 100 154-255 16-121 (123)
488 2k1m_A Myosin-binding protein 99.2 1.6E-10 5.3E-15 72.4 10.4 65 69-136 18-82 (95)
489 2dku_A KIAA1556 protein; beta- 99.2 1.3E-10 4.3E-15 74.0 10.0 94 58-161 8-101 (103)
490 1tdq_A Tenascin-R; extracellul 99.2 5E-08 1.7E-12 73.6 25.9 210 20-246 68-281 (283)
491 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.2E-10 4E-15 74.2 9.6 76 59-138 16-93 (104)
492 1i1c_A IGG2A, IG gamma-2A chai 99.2 5E-11 1.7E-15 87.9 8.9 163 71-239 29-212 (239)
493 1qr4_A Protein (tenascin); fib 99.2 1.9E-08 6.5E-13 71.0 22.1 130 113-249 54-183 (186)
494 3t1w_A Four-domain fibronectin 99.2 4.3E-08 1.5E-12 77.1 26.2 213 20-247 150-365 (375)
495 2ede_A Netrin receptor DCC; tu 99.2 4.2E-10 1.4E-14 72.9 12.2 98 155-254 7-110 (114)
496 3shs_A HOC head outer capsid p 99.2 6E-10 2E-14 81.2 14.0 155 70-248 13-180 (304)
497 3u2s_H PG9 heavy chain; greek 99.2 7.9E-11 2.7E-15 87.4 9.8 172 69-245 9-234 (248)
498 2ed9_A Netrin receptor DCC; tu 99.2 5.1E-11 1.7E-15 78.6 7.9 114 134-250 4-122 (124)
499 1zlg_A Anosmin 1; insulin-like 99.2 3.2E-09 1.1E-13 90.0 20.8 134 116-251 222-375 (680)
500 3bn3_B ICAM-5, intercellular a 99.2 3.1E-11 1.1E-15 85.2 7.1 119 21-141 53-174 (196)
No 1
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=100.00 E-value=5.6e-31 Score=202.53 Aligned_cols=240 Identities=20% Similarity=0.242 Sum_probs=183.8
Q ss_pred CCCCeeccCCCCceEEE--ECC--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCce----eEEEee
Q psy11549 1 MAGGIPLAHNTSARIIL--SNQ--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRI----VIVGAS 72 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~--~~~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~----~~~~~~ 72 (261)
+|||.++..+..+..+. .++ +|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+..+.. ....+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~ 117 (305)
T 2nzi_A 39 YRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHAL 117 (305)
T ss_dssp EETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEE-EEEEEEEECEEEEECCCHHHHSSCCEEEE
T ss_pred EECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCc-cceEEEEEecCCccCCCccccccccEEec
Confidence 47888887554444332 233 89999999999999999999998876 7788999998887654331 225678
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEec-CCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTP-VTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
.|+.+.|.|.+.+.|.+ .+.|++++.... ......+........|.|.+ +..+|.|.|+|.|.|..|.... .+.+
T Consensus 118 ~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~--~~~l 193 (305)
T 2nzi_A 118 RGEVVSIKIPFSGKPDP-VITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQK--TVEL 193 (305)
T ss_dssp TTCCEEEEEEEEEESCC-EEEEEESSSBCC-SSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEE--EEEE
T ss_pred CCCEEEEEEEECCCCCC-EEEEEECCEECC-CCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceee--EEEE
Confidence 99999999999999888 899999774211 11222233344556899999 9999999999999999988766 4556
Q ss_pred EeCCCCCCCCcceEEeecCCeEEEEeecC-CCCCCCe-EEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEE
Q psy11549 152 VLAGKPQPPQNCSVRNETTSSVHISCTPG-YDGGLPQ-TFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~~~~~l~c~~~-~~~~~p~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
.+..+|.+|..+.+....+..+.|.|.++ .+++.++ .|.+.++..... .| .........+.|.+ |.++..|.|
T Consensus 194 ~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~--~w~~~~~~~~~~~~i~~--l~~~~~y~~ 269 (305)
T 2nzi_A 194 DVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAE--RWLRVGQARETRYTVIN--LFGKTSYQF 269 (305)
T ss_dssp EEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSC--CEEEEEEESSSEEEECS--CCSSCEEEE
T ss_pred EEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCC--ccEECccccCceEEecC--CCCCCeEEE
Confidence 66688999998888878899999999964 4556665 488888776544 34 22222367899999 899999999
Q ss_pred EEEEEcCCCcCCceeeeeeee
Q psy11549 229 VISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~~~~ 249 (261)
+|.|.|..|.+++|.......
T Consensus 270 ~~~A~N~~G~~~~S~~~~~~~ 290 (305)
T 2nzi_A 270 RVIAENKFGLSKPSEPSEPTI 290 (305)
T ss_dssp EEEEEETTEECCCCCCCCCEE
T ss_pred EEEEEeCCcccCCcCCCCCEE
Confidence 999999999999998876443
No 2
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=1.1e-30 Score=207.44 Aligned_cols=242 Identities=21% Similarity=0.376 Sum_probs=184.6
Q ss_pred CC--CeeccCC----CCceEEEE---CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEee
Q psy11549 2 AG--GIPLAHN----TSARIILS---NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGAS 72 (261)
Q Consensus 2 ~n--g~~l~~~----~~~~~~~~---~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~ 72 (261)
|| |.+|... +.+..... +++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+...... ..+.
T Consensus 36 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~P~~~~~~~~-~~~~ 113 (389)
T 2jll_A 36 RAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGH-QKSMYLDIEYAPKFISNQTI-YYSW 113 (389)
T ss_dssp ETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEECCSCCE-EEEC
T ss_pred eCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCc-ceEEEEEEEeCCEEecCcce-EEec
Confidence 55 7887532 23344332 3589999999999999999999999987 77899999999988765543 5778
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-CCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDV-GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
.|+.+.|.|.+.+.|.+ .+.|++++....... .............|.|.++..+|+|.|+|.|.|..|.... .+.+
T Consensus 114 ~g~~~~l~C~~~g~p~~-~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~--~~~l 190 (389)
T 2jll_A 114 EGNPINISCDVKSNPPA-SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQ--EYIL 190 (389)
T ss_dssp TTCCEEEEECEEEESCC-EEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEE--EEEE
T ss_pred cCCEEEEEEEEEecCCC-eEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEE--EEEE
Confidence 99999999999999887 899999874322111 1112223444568999999999999999999999988766 4556
Q ss_pred EeCCCCCCCCcceEEeecCCeEEEEeecC-CCCCCCeE-EEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEE
Q psy11549 152 VLAGKPQPPQNCSVRNETTSSVHISCTPG-YDGGLPQT-FTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVV 229 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~~~~~l~c~~~-~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~ 229 (261)
.+..+|.+|..+.+.......+.|.|.++ .+++.|+. |.+.|+..+...............+.|.+ |.++..|.|+
T Consensus 191 ~v~~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~--l~~~~~y~~~ 268 (389)
T 2jll_A 191 ALADVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNN--LEPNTTYEIR 268 (389)
T ss_dssp EECCCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECS--CCTTCEEEEE
T ss_pred EecCCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEeeccCCcceEEECC--ccCCCEEEEE
Confidence 66788888888877777889999999964 35566764 88888876654222222233457899999 9999999999
Q ss_pred EEEEcCCCcCCceeeeeeeec
Q psy11549 230 ISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 230 ~~a~N~~G~~~~s~~~~~~~~ 250 (261)
|.|.|..|.+.+|..+.+...
T Consensus 269 v~A~N~~G~~~~s~~~~~~t~ 289 (389)
T 2jll_A 269 VAAVNGKGQGDYSKIEIFQTL 289 (389)
T ss_dssp EEEEESSCBCCCCCCEEEECC
T ss_pred EEEEcCCccCCCCcceEEEec
Confidence 999999999999988776653
No 3
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.97 E-value=1.3e-28 Score=187.49 Aligned_cols=236 Identities=17% Similarity=0.217 Sum_probs=166.9
Q ss_pred CCCCeeccCCCCceEEEE--CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEE
Q psy11549 1 MAGGIPLAHNTSARIILS--NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVD 78 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~--~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~ 78 (261)
+|||.++........... +.+|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|..+|.+.........+..|+.+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~ 118 (284)
T 2rik_A 40 AKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKD-SCSAQLGVQEPPRFIKKLEPSRIVKQDEHTR 118 (284)
T ss_dssp EETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCEEEECCCSEEEEETTCCEE
T ss_pred EECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceE-EEEEEEEccCCCcccccCCCceEecCCceEE
Confidence 478888875444333333 3589999999999999999999998876 6788999998888765443336688999999
Q ss_pred EEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 79 IHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 79 l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
|.|.+.+.|.+ .+.|++++.... ...............|.|.++..+|+|.|+|.+.|..|..... +.+.+..+|.
T Consensus 119 l~C~~~g~p~~-~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~p~ 194 (284)
T 2rik_A 119 YECKIGGSPEI-KVLWYKDETEIQ-ESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS--TSLKVKEPPV 194 (284)
T ss_dssp EEEEEESSSCC-EEEEEETTEECC-CSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE--EEEEEECCCB
T ss_pred EEEEEeeeCCC-EEEEEECCEECc-CCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEE--EEEEEecCCc
Confidence 99999988877 899999874221 1222233344556689999999999999999999998877664 4444545553
Q ss_pred ---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeE-EEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 159 ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 159 ---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
.|.. +....|..+.|.|.+ .+..++.+.| ++...... ..+ .........|.|.+++..|.|.| +|.|
T Consensus 195 ~~~~~~~--~~~~~g~~v~l~C~~--~g~p~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C~a 267 (284)
T 2rik_A 195 FRKKPHP--VETLKGADVHLECEL--QGTPPFQVSW-HKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEY--QCKA 267 (284)
T ss_dssp CCSCCCC--EEECTTCCEEEEEEC--BSSSCCEEEE-EETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEE--EEEE
T ss_pred ceeCCCc--ceecCCCeEEEEEEE--EecCCCEEEE-EECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEE--EEEE
Confidence 3333 333569999999997 3333344444 44322211 011 11222335788999999999999 9999
Q ss_pred EcCCCcCCceeeeeee
Q psy11549 233 VNAKGRSLPVIWDDFS 248 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~ 248 (261)
.|..|....+..+.++
T Consensus 268 ~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 268 SNDVGSYTCVGSITLK 283 (284)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EeCCCceeEEEEEEEc
Confidence 9999987776666553
No 4
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.97 E-value=9.7e-29 Score=188.75 Aligned_cols=241 Identities=15% Similarity=0.228 Sum_probs=163.5
Q ss_pred CCeeccCCCCceEEEECC---eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 3 GGIPLAHNTSARIILSNQ---SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 3 ng~~l~~~~~~~~~~~~~---~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
||..+..+.+ .....++ +|.|.+++.+|+|.|+|.+.|..|...+..+.|.|..+|.+...... ..+..|+.+.|
T Consensus 41 ~g~~~~~~~~-~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~-~~v~~G~~v~l 118 (291)
T 2wim_A 41 QGEKIISTQR-VVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSP-QEFKQGEDAEV 118 (291)
T ss_dssp TCCBCCCBTT-EEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCS-EEEETTSCEEE
T ss_pred CCcCccCCCc-EEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCC-hhhcCCCCEEE
Confidence 7777764333 4444433 89999999999999999999998887566788888877766544443 66889999999
Q ss_pred EEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 80 HCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 80 ~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
.|.+.+.|.+ .+.|++++.... .....++..... ..|.|.++..+|.|.|+|.+.+..+.......+.+.+..+|..
T Consensus 119 ~C~~~~~p~~-~v~W~~~~~~~~-~~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~ 195 (291)
T 2wim_A 119 VCRVSSSPAP-AVSWLYHNEEVT-TISDNRFAMLAN-NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAI 195 (291)
T ss_dssp CCCCBCSSCC-EEEEECC----C-BCCCSSEEECTT-SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCC
T ss_pred EEEEccCCCC-EEEEEECCcccc-ccCCceEEEccC-CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCcc
Confidence 9999998887 899998874322 222333333222 3699999999999999999998875544433555555555542
Q ss_pred CCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcccee-EEEecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 160 PQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLL-VNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 160 p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
.... .+....|+.+.|.|.+ . +.|.....|+++....... ..........|.|.++..+|.|.| +|.|.|.
T Consensus 196 ~~~~~~~~~~~~~g~~~~l~C~~--~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y--~C~a~N~ 270 (291)
T 2wim_A 196 SMPQKSFNATAERGEEMTFSCRA--S-GSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPY--VCRATNK 270 (291)
T ss_dssp BCSCSEEECCSSSCCEEEEECBC--C-CBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEE--EEEEEET
T ss_pred ccCcccccceecCCCeEEEEEEe--e-cCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEE--EEEEEEC
Confidence 2111 2233569999999997 3 3343334444543221110 011223457899999999999999 9999999
Q ss_pred CCcCCceeeeeeeecccc
Q psy11549 236 KGRSLPVIWDDFSMSGAH 253 (261)
Q Consensus 236 ~G~~~~s~~~~~~~~~~~ 253 (261)
+|..+.+..+.+..++++
T Consensus 271 ~G~~~~~~~l~v~~~~~~ 288 (291)
T 2wim_A 271 AGEDEKQAFLQVFVQHHH 288 (291)
T ss_dssp TEEEEEEEEEEC------
T ss_pred CCceeeeEEEEEEEeccc
Confidence 999999999998876554
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.97 E-value=5.6e-29 Score=190.07 Aligned_cols=237 Identities=18% Similarity=0.229 Sum_probs=164.4
Q ss_pred CCeeccCCCCceEEEE----CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEE
Q psy11549 3 GGIPLAHNTSARIILS----NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVD 78 (261)
Q Consensus 3 ng~~l~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~ 78 (261)
||.++..+..+..... +.+|.|.+++.+|+|.|+|.+.|..|...+..+.|.|..+|.+...+.. ..+..|+.+.
T Consensus 41 ~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~-~~~~~g~~v~ 119 (291)
T 1qz1_A 41 NGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTP-QEFKEGEDAV 119 (291)
T ss_dssp TSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSS-EEEETTSCEE
T ss_pred CCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCc-ccccCCCeEE
Confidence 8888875555444432 3589999999999999999999998766577888888888776655444 6678999999
Q ss_pred EEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 79 IHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 79 l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
|.|.+.+.|.+ .+.|++++..... ....++..... ..|.|.++..+|+|.|+|.+.|..+.......+.+.+..+|.
T Consensus 120 l~C~~~~~p~~-~v~W~~~~~~~~~-~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~ 196 (291)
T 1qz1_A 120 IVCDVVSSLPP-TIIWKHKGRDVIL-KKDVRFIVLSN-NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPT 196 (291)
T ss_dssp ECCEEECSSCC-EEEEEETTSCSST-TCCTTEEECTT-SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEE
T ss_pred EEEEeccCCCC-EEEEEECCEEccc-CCCceEEEccC-CcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCc
Confidence 99999998887 8999998753222 22223333222 369999999999999999999876444333345555544443
Q ss_pred C---CCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcccee-----EEEecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 159 P---PQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLL-----VNLTNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 159 ~---p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
. +....+....|+.+.|.|.+ .+..++.+. |+++....... ..........|.|.++..+|.|.| +|
T Consensus 197 ~~~~~~~~~~~~~~g~~v~l~C~~--~g~p~p~i~-W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C 271 (291)
T 1qz1_A 197 VQARQSIVNATANLGQSVTLVCDA--DGFPEPTMS-WTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEY--VC 271 (291)
T ss_dssp EEESCSEEEEETTSCCCEEEEEEE--EEESCCEEE-EEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEE--EE
T ss_pred ccccccccccccccCceEEEEEEE--EEeCCCcEE-EEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEE--EE
Confidence 1 11123344579999999997 333333444 44443221110 111223346799999999999999 99
Q ss_pred EEEcCCCcCCceeeeeee
Q psy11549 231 SGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~~~ 248 (261)
.|.|..|....+..+.|.
T Consensus 272 ~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 272 IAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCceEEEEEEEEE
Confidence 999999988777776664
No 6
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.97 E-value=1.5e-28 Score=204.24 Aligned_cols=234 Identities=17% Similarity=0.274 Sum_probs=169.8
Q ss_pred CCCCeeccCCCCceEEEEC--CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEE
Q psy11549 1 MAGGIPLAHNTSARIILSN--QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVD 78 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~--~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~ 78 (261)
||||.+|..+........+ ..|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+...+.. ..+.+|+.+.
T Consensus 326 ~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~P~~~~~~~~-~~~~~G~~v~ 403 (570)
T 3b43_A 326 YKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSA-SSSTSLKVKEPPVFRKKPHP-VETLKGADVH 403 (570)
T ss_dssp EETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCC-EEEEEECEECCCEECSCCCC-EEECTTCCEE
T ss_pred eECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEE-EEEEEEEecCCCeeecCCCc-eeecCCCEEE
Confidence 5789998755443333333 479999999999999999999999987 66789999999988766554 6678999999
Q ss_pred EEEEEeeCCCCceeEEEEcCCccccccC-CceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCC
Q psy11549 79 IHCAVEADPPARSFKWKFNNSGETLDVG-SERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 79 l~C~~~~~~~~~~~~W~~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p 157 (261)
|.|.+.+.|.| .+.|++++.. +... ...+...+....|.|.++..+|+|.|+|.|.|..|..... ..+.+..+|
T Consensus 404 l~C~~~g~P~p-~v~W~k~g~~--l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~--~~l~v~~~P 478 (570)
T 3b43_A 404 LECELQGTPPF-QVSWHKDKRE--LRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCV--GSITLKAPP 478 (570)
T ss_dssp EEEEEESSSSC-CCEEEETTEE--CCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE--EEEEECCCC
T ss_pred EEEEEecCCCC-EEEEEECCEE--CcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEE--EEEEeccCC
Confidence 99999999988 8999998742 2221 2222334445679999999999999999999999987764 445555666
Q ss_pred C---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc---ceeEEE-ecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 158 Q---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL---NLLVNL-TNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 158 ~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
. .+.+.. ...|+.+.|.|.+ .+..++.+.| +++.... ...... .......|.|.++..+|+|.| +|
T Consensus 479 ~~~~~~~~~~--~~~g~~~~l~c~~--~g~p~~~v~W-~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y--~C 551 (570)
T 3b43_A 479 RFVKKLSDIS--TVVGEEVQLQATI--EGAEPISVAW-FKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKY--TC 551 (570)
T ss_dssp EEEECCCCBC--CBTTCCEEEEEEE--ESCSSCCCEE-EETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEE--EE
T ss_pred cccccCCCce--ecCCCeEEEEEEE--ecCCCCEEEE-EeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEE--EE
Confidence 4 333333 3469999999997 3433444444 4432111 001111 112335799999999999999 99
Q ss_pred EEEcCCCcCCceeeeeee
Q psy11549 231 SGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~~~ 248 (261)
.|.|.+|..+.+..+.|.
T Consensus 552 ~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 552 QIKNEAGTQECFATLSVL 569 (570)
T ss_dssp EEECSSCEEEEEEEECCB
T ss_pred EEEECCcEEEEEEEEEEe
Confidence 999999999888877663
No 7
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.96 E-value=2.9e-28 Score=202.64 Aligned_cols=237 Identities=17% Similarity=0.207 Sum_probs=167.9
Q ss_pred CCCCeeccCCCCceEEEEC--CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEE
Q psy11549 1 MAGGIPLAHNTSARIILSN--QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVD 78 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~--~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~ 78 (261)
+|||++|..+........+ .+|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+.........+..|+.+.
T Consensus 232 ~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~ 310 (570)
T 3b43_A 232 AKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKD-SCSAQLGVQEPPRFIKKLEPSRIVKQDEHTR 310 (570)
T ss_dssp EETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEE-EEEEEECCBCCCEEEECCCSBCCEESSCEEE
T ss_pred EECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcE-EEEEEEEeecCCcccccCCCccEEcCCCcEE
Confidence 4789998755443333332 489999999999999999999999887 6778999998888764433224567999999
Q ss_pred EEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 79 IHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 79 l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
|.|.+.+.|.+ .+.|++++.... .....++........|.|.++..+|+|.|+|.|.|..|....... +.+..+|.
T Consensus 311 l~C~~~g~P~p-~v~W~k~~~~l~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~--l~V~~~P~ 386 (570)
T 3b43_A 311 YECKIGGSPEI-KVLWYKDETEIQ-ESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTS--LKVKEPPV 386 (570)
T ss_dssp EEEEEESSSSC-EEEEEETTEECC-CSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEE--ECEECCCE
T ss_pred EEEEEeeCCCC-EEEEeECCEECC-CCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEE--EEecCCCe
Confidence 99999999888 899999874221 122223333445568999999999999999999999998777544 44445553
Q ss_pred ---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeE-EEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 159 ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 159 ---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
.|.. +....|..+.|.|.+ . +.|..-+.|+++..... ..+ .........|.|.++..+|.|.| +|.|
T Consensus 387 ~~~~~~~--~~~~~G~~v~l~C~~--~-g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y--~C~A 459 (570)
T 3b43_A 387 FRKKPHP--VETLKGADVHLECEL--Q-GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEY--QCKA 459 (570)
T ss_dssp ECSCCCC--EEECTTCCEEEEEEE--E-SSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEE--EEEE
T ss_pred eecCCCc--eeecCCCEEEEEEEE--e-cCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEE--EEEE
Confidence 3333 333569999999997 3 44433233444432211 112 12222235788999999999999 9999
Q ss_pred EcCCCcCCceeeeeeee
Q psy11549 233 VNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~ 249 (261)
.|.+|....+..+.+..
T Consensus 460 ~N~~G~~~~~~~l~v~~ 476 (570)
T 3b43_A 460 SNDVGSDTCVGSITLKA 476 (570)
T ss_dssp ECSSCEEEEEEEEEECC
T ss_pred EECCCeEEEEEEEEecc
Confidence 99999877766665543
No 8
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=182.13 Aligned_cols=236 Identities=18% Similarity=0.253 Sum_probs=148.8
Q ss_pred CCCCeeccCCCCceEEEEC---CeEEEccCCC-CCCEeEEEEEEeCCCcceeeeEEEEEEee-------ceeecCceeEE
Q psy11549 1 MAGGIPLAHNTSARIILSN---QSLVLQKVSR-QSAGTYKCSAINTKGEATSNQLKLRVKYA-------PICKSDRIVIV 69 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~---~~L~i~~~~~-~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~-------p~~~~~~~~~~ 69 (261)
+|||+++...........+ .+|.|.+++. +|+|.|+|.|.|..|.. +..+.|.|... |.+...+.. .
T Consensus 41 ~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~p~~~p~i~~~~~~-~ 118 (304)
T 2yd9_A 41 NKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEI-TVHAKLTVLREDQLPSGFPNIDMGPQL-K 118 (304)
T ss_dssp C-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEE-CCEEEEEEECGGGCCTTCCEEEECCCC-E
T ss_pred EECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeE-EEEEEEEEeccccCCCCCCeeecCCcc-E
Confidence 5788888533222222233 4799999998 99999999999998885 67789999865 444433333 5
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee-EE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP-CL 148 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~-~~ 148 (261)
.+..|+.+.|.|.+.+.|.+ .+.|++++..........++.... ...|.|.++..+|+|.|+|.+.|..|..... ..
T Consensus 119 ~v~~g~~v~l~C~~~g~p~~-~v~W~k~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~ 196 (304)
T 2yd9_A 119 VVERTRTATMLCAASGNPDP-EITWFKDFLPVDPSASNGRIKQLR-SGALQIESSEETDQGKYECVATNSAGVRYSSPAN 196 (304)
T ss_dssp EEETTSCEEECCEEECSSCC-EEEEEETTEECCGGGGTTSEEECT-TSCEEECSCCGGGCEEEEEEEEETTEEEECCCEE
T ss_pred EEeCCCeEEEEEECccCCCC-eEEEEECCEECcCCCCcceEEeCC-CeEEEEccCCcccCEEEEEEEEeCCCCEEeccEE
Confidence 67899999999999998888 899999874322211122332222 2379999999999999999999998876543 35
Q ss_pred EEEEeC-CCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCcc
Q psy11549 149 YQVVLA-GKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTV 224 (261)
Q Consensus 149 ~~v~~~-~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~ 224 (261)
+.+.+. .+|. .|....+ ..|+.+.|.|.+ . +.|...+.|+++......... .......+.|.+ ++++|
T Consensus 197 l~v~~~~~~P~~~~~~~~~~v--~~G~~v~l~C~~--~-g~p~p~v~W~~~~~~l~~~~~-~~~~~~~L~i~~--~~d~G 268 (304)
T 2yd9_A 197 LYVRVQNVAPRFSILPMSHEI--MPGGNVNITCVA--V-GSPMPYVKWMQGAEDLTPEDD-MPVGRNVLELTD--VKDSA 268 (304)
T ss_dssp EEEECCCEEEEEEECCCCBCC--CTTCCEEEEEEE--E-EESCCEEEEEETTEECSCSSS-CCBSEEEEEECS--CCSCE
T ss_pred EEEEeeccCCcEEecCCceEE--cCCCeEEEEEEE--e-eeCCCEEEEEECCEECCCccc-ccCCcEEEEEcc--cccCE
Confidence 555442 2221 2233222 469999999997 3 334333344444322110000 111223467777 78999
Q ss_pred EEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 225 LMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 225 ~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
.| +|.|.|.+|....+..+.+..+
T Consensus 269 ~Y--~C~a~N~~G~~~~~~~l~V~~~ 292 (304)
T 2yd9_A 269 NY--TCVAMSSLGVIEAVAQITVKSL 292 (304)
T ss_dssp EE--EEEEEETTEEEEEEEEEC----
T ss_pred EE--EEEEEeCCCcEEEEEEEEEecC
Confidence 99 9999999998887777776543
No 9
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.95 E-value=6.4e-27 Score=185.56 Aligned_cols=231 Identities=16% Similarity=0.264 Sum_probs=155.8
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcce--eeeEEEEEE-------eeceeecCceeEEEe
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEAT--SNQLKLRVK-------YAPICKSDRIVIVGA 71 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~--s~~~~l~V~-------~~p~~~~~~~~~~~~ 71 (261)
+|||.++..+..+.....+++|.|.+++.+|+|.|+|.|.|..+... .....+.+. ..|.+.........+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~ 217 (384)
T 3kld_A 138 IFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPA 217 (384)
T ss_dssp EETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEE
T ss_pred EECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEe
Confidence 36777776444444444567999999999999999999999877542 112233332 233333222222567
Q ss_pred eCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 72 SRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 72 ~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
..|+.+.|.|.+.+.|.| .+.|++++. ..+.. ..+ .......|.|.++..+|+|.|+|.|.|..|.......+.+
T Consensus 218 ~~G~~v~l~C~~~g~P~p-~i~W~k~~~-~~~~~-~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v 292 (384)
T 3kld_A 218 EKGTTVKLECFALGNPVP-TILWRRADG-KPIAR-KAR--RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTF 292 (384)
T ss_dssp ETTSCEEEEEEEEEESCC-EEEEEETTC-CCCCT-TCE--ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEeecCCC-cEEEEeCCC-ccccc-cce--ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEE
Confidence 899999999999999988 899998543 22211 111 1222347999999999999999999999998777555554
Q ss_pred EeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 152 VLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 152 ~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
. .+|. .+.+.. ...|..+.|.|.+ .+.|..-+.|+++...... .... ....+.|.++..+|.|.|
T Consensus 293 ~--~~P~~~~~~~~~~--v~~g~~v~l~C~~---~g~P~p~i~W~k~g~~l~~~~~~~~---~~~~L~i~~v~~~D~G~Y 362 (384)
T 3kld_A 293 Y--AQPNWVQIINDIH--VAMEESVFWECKA---NGRPKPTYRWLKNGDPLLTRDRIQI---EQGTLNITIVNLSDAGMY 362 (384)
T ss_dssp E--EEEEEEECCCCEE--ECTTCCEEEECEE---EEESCCEEEEEETTEECCCBTTEEE---ETTEEEESSCCGGGCEEE
T ss_pred e--cCCccccCCCceE--ecCCCCEEEEeEC---CccCCCeEEEEECCEECCCCccEEE---eCCEEEEeecChhhCEEE
Confidence 4 3332 333333 3569999999997 3444333344454322211 1111 235899999999999999
Q ss_pred EEEEEEEcCCCcCCceeeeeee
Q psy11549 227 RVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 227 ~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+|.|.|.+|....+..+.|.
T Consensus 363 --~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 363 --QCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp --EEEEEETTEEEEEEEEEEEC
T ss_pred --EEEEEeCCceEEeceEEEEe
Confidence 99999999988888777664
No 10
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.95 E-value=3.5e-27 Score=183.64 Aligned_cols=239 Identities=18% Similarity=0.242 Sum_probs=117.0
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece--------------------
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI-------------------- 60 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~-------------------- 60 (261)
+|||.+|..+. +....+++|.|.+++.+|+|.|+|.+.|. +.. +..+.|.|...|.
T Consensus 44 ~k~g~~~~~~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (334)
T 1ry7_B 44 VKDGTGLVPSE--RVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRV-LCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGA 119 (334)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred EECCeeCCCcc--cEEeccceEEEeecccccCEEEEEEEEeC-CeE-EEEEEEEEeccCccccccccccccccccccCCC
Confidence 57888885432 34446789999999999999999999998 554 5667777775432
Q ss_pred --eecCc---eeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 61 --CKSDR---IVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 61 --~~~~~---~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+..+. .....+..|+.+.|.|.+.+.|.+ .+.|++++...........+........|.|.++..+|+|.|+|.
T Consensus 120 p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 198 (334)
T 1ry7_B 120 PYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTP-SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCV 198 (334)
T ss_dssp CCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCC-EEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEE
T ss_pred CEEeccccccceeEEecCCCcEEEEEEccCCCCC-eEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEE
Confidence 22111 122567899999999999988877 899999874322111111122333445799999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCC--CC----CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEe----CCcc----ce
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGK--PQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYS----ASDL----NL 201 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~--p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~----~~~~----~~ 201 (261)
+.|..|.......+.|....+ |. .|.. .....|+.+.|.|.+ . +.|.....|++. .... ..
T Consensus 199 a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~--~~~~~G~~v~l~C~~--~-g~p~p~v~W~~~~~~~g~~~~~~~~~ 273 (334)
T 1ry7_B 199 VENKFGSIRQTYTLDVLERSPHRPILQAGLPAN--QTAVLGSDVEFHCKV--Y-SDAQPHIQWLKHVEVNGSKVGPDGTP 273 (334)
T ss_dssp EEETTEEEEEEEEEEEECCCCSSCBCCTTCSCC--EEEESSCCEEECCCC--B-CSSCEEEEEEECCCGGGCSBCTTSSB
T ss_pred EEeCCCCEEEEEEEEEecCCCCCCceEecCCCc--eEEeCCCCEEEEEEE--e-cCCCCeEEEEECCcCCCccccCCCCe
Confidence 999988776654454443211 11 1222 333569999999997 3 445443444442 1110 00
Q ss_pred eEEEe--------cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeecc
Q psy11549 202 LVNLT--------NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 202 ~~~~~--------~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~ 251 (261)
..... ......|.|.+++..|.|.| +|.|.|..|....+..+.+....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C~a~N~~G~~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 274 YVTVLKTAGANTTDKELEVLSLHNVTFEDAGEY--TCLAGNSIGFSHHSAWLVVLPAE 329 (334)
T ss_dssp CCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEE--EEEEEESSCCEEEEEEEEEECSC
T ss_pred eEEEeecCccccccccccEEEEccCCHHHCEEE--EEEEeCCCCeEEEEEEEEEEECC
Confidence 00000 01123799999999999999 99999999998888888776543
No 11
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.95 E-value=5.1e-27 Score=187.19 Aligned_cols=236 Identities=18% Similarity=0.226 Sum_probs=163.4
Q ss_pred CCCCeeccC--CCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceee------cCceeEEEee
Q psy11549 1 MAGGIPLAH--NTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICK------SDRIVIVGAS 72 (261)
Q Consensus 1 ~~ng~~l~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~------~~~~~~~~~~ 72 (261)
+|||.++.. ...+.....+++|.|.+++.+|+|.|+|.+.|..+...+..+.|.|...|... ..... ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~-~~~~ 234 (403)
T 3laf_A 156 QKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSN-VIAI 234 (403)
T ss_dssp EESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCC-EEEE
T ss_pred EECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCc-eEec
Confidence 467887752 23445555678999999999999999999999887765567788887665322 12222 5677
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
.|+.+.|.|.+.+.|.+ .+.|++++.. +......+.... ...|.|.++..+|+|.|+|.+.|..|.......+.+.
T Consensus 235 ~g~~~~l~C~~~~~p~~-~~~W~~~~~~--~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 310 (403)
T 3laf_A 235 EGKDAVLECCVSGYPPP-SFTWLRGEEV--IQLRSKKYSLLG-GSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL 310 (403)
T ss_dssp TTSCEEECCEEEEESCC-EEEEEETTEE--CCCSSSSEEEET-TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEcCCCCCC-eEEEEECCee--ccCCCceEEECC-ccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEE
Confidence 99999999999998888 8999997742 222233333222 2369999999999999999999998877765455444
Q ss_pred eCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEE
Q psy11549 153 LAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVV 229 (261)
Q Consensus 153 ~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~ 229 (261)
.+|. .|... ....|..+.|.|.+ .+..+..+. |+++.................|.|.++..+|.|.| +
T Consensus 311 --~~p~~~~~~~~~--~~~~g~~v~l~C~~--~g~p~p~v~-W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~ 381 (403)
T 3laf_A 311 --VPPWFLNHPSNL--YAYESMDIEFECAV--SGKPVPTVN-WMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFY--Q 381 (403)
T ss_dssp --EEEEEEECCCCE--ECCTTCCEEECCEE--EEESCCEEE-EEETTEECCCSSSEEEETTTEEEESSCCGGGCEEE--E
T ss_pred --CCCcEeecCcce--EEecCCeEEEEEEE--eeccCCEEE-EEECCEECCCCCcEEEecCccEEEeccccccCEEE--E
Confidence 3442 33333 33569999999997 333334444 44433221101111112347899999999999999 9
Q ss_pred EEEEcCCCcCCceeeeeeeec
Q psy11549 230 ISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 230 ~~a~N~~G~~~~s~~~~~~~~ 250 (261)
|.|.|..|....+..+.+..+
T Consensus 382 C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 382 CVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp EEEEETTEEEEEEEEEECCCC
T ss_pred EEEEcCCceEEEEEEEEEeCC
Confidence 999999999888877776543
No 12
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.95 E-value=5.6e-26 Score=191.48 Aligned_cols=228 Identities=18% Similarity=0.260 Sum_probs=162.1
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||++|..+........+++|.|.+++.+|+|.|+|.|.|..|...+..+.|.|..+|...........+..|+.+.|.
T Consensus 323 ~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 402 (642)
T 1e07_A 323 WVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLS 402 (642)
T ss_pred EECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEE
Confidence 47898886544433334567999999999999999999999998766677899998777543222222567899999999
Q ss_pred EEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCC
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPP 160 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p 160 (261)
|.+.+.|.+ .+.|++++.. +. . ...|.|.++..+|.|.|+|.|.|..|....+..+.+.+..++.+|
T Consensus 403 C~~~g~p~~-~i~W~~~g~~--~~--~--------~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p 469 (642)
T 1e07_A 403 CHAASNPPA-QYSWLIDGNI--QQ--H--------TQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKP 469 (642)
T ss_pred EEcCccCCC-eEEEEECCEE--cC--C--------CceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCc
Confidence 999998888 8999998742 21 1 236999999999999999999999887766556667665544433
Q ss_pred Cc---ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 161 QN---CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 161 ~~---~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
.. .......|+.+.|.|.+. +.+..+.|+ ++...... ..... .....|.|.++...|.|.| +|.|.|.
T Consensus 470 ~i~~~~~~~v~~g~~v~l~C~~~---~~~~~i~W~-~~g~~l~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y--~C~a~n~ 542 (642)
T 1e07_A 470 SISSNNSKPVEDKDAVAFTCEPE---AQNTTYLWW-VNGQSLPVSPRLQLS-NGNRTLTLFNVTRNDARAY--VCGIQNS 542 (642)
T ss_pred eEecCCceeecCCCeEEEEEECC---CCCcEEEEE-ECCEeCCCCCcEEEc-CCCcEEEEeecChhcCceE--EEEeEcC
Confidence 21 112234699999999983 334445554 43322211 11222 2346899999999999999 9999999
Q ss_pred CCcCCc-eeeeeee
Q psy11549 236 KGRSLP-VIWDDFS 248 (261)
Q Consensus 236 ~G~~~~-s~~~~~~ 248 (261)
.|.... +..+.+.
T Consensus 543 ~g~~~s~~~~l~V~ 556 (642)
T 1e07_A 543 VSANRSDPVTLDVL 556 (642)
T ss_pred CCCccCCCEEEEEE
Confidence 996543 3455554
No 13
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=4.1e-27 Score=183.62 Aligned_cols=242 Identities=14% Similarity=0.081 Sum_probs=161.7
Q ss_pred CCCCeec--cCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCc-eeEEEeeCCCcE
Q psy11549 1 MAGGIPL--AHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDR-IVIVGASRSESV 77 (261)
Q Consensus 1 ~~ng~~l--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~-~~~~~~~~g~~~ 77 (261)
+|||.++ ......++...+++|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|..++...... .....+..|+.+
T Consensus 60 ~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v 138 (339)
T 3o4o_C 60 HKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCD-KMSIELRVFENTDAFLPFISYPQILTLSTSG 138 (339)
T ss_dssp EESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEE-EEEEEEEEECSCGGGHHHHCEEEEEETTSCE
T ss_pred EECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceE-EEEEEEEEEcCCCccccccccceEEECCCCE
Confidence 4677774 333244666788999999999999999999999988765 667888888665432111 112467899999
Q ss_pred EEEEE-----EeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCce----EEeeEE
Q psy11549 78 DIHCA-----VEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGT----QVTPCL 148 (261)
Q Consensus 78 ~l~C~-----~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~----~~~~~~ 148 (261)
.|.|. +.+.|.+ .+.|++++. .+.....++........|.|.++..+|+|.|+|.+.|..+. ......
T Consensus 139 ~l~C~~~~~~~~g~p~~-~v~W~k~g~--~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~ 215 (339)
T 3o4o_C 139 VLVCPDLSEFTRDKTDV-KIQWYKDSL--LLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIE 215 (339)
T ss_dssp EEECCSCTTTCCSSSCC-CBCCEESSC--BCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEE
T ss_pred EEEecCCcccccCCCCc-eEEEecCCe--eCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEE
Confidence 99999 6777777 899999774 33333345555554458999999999999999999998763 333334
Q ss_pred EEEEeCCCCCCCCc----ceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccc-------eeE--EEecCCCC---
Q psy11549 149 YQVVLAGKPQPPQN----CSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSASDLN-------LLV--NLTNLDTP--- 211 (261)
Q Consensus 149 ~~v~~~~~p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~-------~~~--~~~~~~~~--- 211 (261)
+.|.......+|.. ..+....|+.+.|.|.+....+.| ....+|+++..... ... ........
T Consensus 216 l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 295 (339)
T 3o4o_C 216 LRIKKKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENY 295 (339)
T ss_dssp EEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCE
T ss_pred EEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceE
Confidence 44432221112211 111224599999999963334555 55556655433210 000 11111122
Q ss_pred ---cEEEcCCCCCCc-cEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 212 ---AFTLEDLGLDGT-VLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 212 ---~~~i~~~~l~~~-~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.|.|.++..+|. |.| +|.|.|.+|.......+.+.
T Consensus 296 ~~~~L~i~~v~~~d~~G~Y--~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 296 IEVPLIFDPVTREDLHMDF--KCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp EEECCEECSSCCCSCCCCC--EEEEEETTEEECCBCCCCC-
T ss_pred EEEEEEEEEechhhcCccE--EEEEEeccCceEEEEEhhHh
Confidence 799999999996 999 99999999988877766654
No 14
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.94 E-value=1.8e-26 Score=179.24 Aligned_cols=232 Identities=13% Similarity=0.139 Sum_probs=151.2
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCE-eEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAG-TYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
||||.++....+ . ..+++|.|.+++.+|+| .|+|.|.|..|......+.+.+..+|.+...... ..+..|+.+.|
T Consensus 73 ~k~~~~~~~~~~-~--~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~-~~~~~G~~v~L 148 (329)
T 3oq3_B 73 EKIGKTRRPLNR-R--VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYE-LGTHDKYGIDL 148 (329)
T ss_dssp EECSSSCEECST-T--EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEE-TTSSTTTCEEE
T ss_pred EECCCCccccCc-e--eecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccc-eEEeCCCcEEE
Confidence 467776654333 2 56889999999999999 9999999998775333333333344443322221 34567999999
Q ss_pred EEEEeeCC-CCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcC--CceEEe--eEEEEEEeC
Q psy11549 80 HCAVEADP-PARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNA--IGTQVT--PCLYQVVLA 154 (261)
Q Consensus 80 ~C~~~~~~-~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~--~~~~~~--~~~~~v~~~ 154 (261)
.|.+.+.| .+ .+.|++++.. +.....++...+ ..|.|.++..+|+|.|+|.|.|. .|.... +..+.+.+.
T Consensus 149 ~C~~~g~p~~~-~i~W~k~~~~--l~~~~~~~~~~~--~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~ 223 (329)
T 3oq3_B 149 YCGILYAKHYN-NITWYKNNQE--LIIDGTKYSQSG--QNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVI 223 (329)
T ss_dssp ECCCCSCCCCC-EEEEEETTEE--CCCSSSSEEEET--TEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEE
T ss_pred EeccCCCCCCc-eEEEEECCcc--CCCCCceEecCC--CEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEE
Confidence 99999988 66 8999998743 323344444333 47999999999999999999986 443322 223555555
Q ss_pred CCCC------CCCcceEEeecCCeEEEEeecCCCCCC--CeE-EEEEEEeCCc-ccee---E-EE-ec--CCCCcEEEcC
Q psy11549 155 GKPQ------PPQNCSVRNETTSSVHISCTPGYDGGL--PQT-FTLELYSASD-LNLL---V-NL-TN--LDTPAFTLED 217 (261)
Q Consensus 155 ~~p~------~p~~~~v~~~~~~~~~l~c~~~~~~~~--p~~-~~~~~~~~~~-~~~~---~-~~-~~--~~~~~~~i~~ 217 (261)
.+|. .|. .+....|+.+.|.|.+ .+.. +.. ...|++.... .... . .. .. .....|.|.+
T Consensus 224 ~~~~~~~~~~~~~--~~~v~~G~~~~l~C~~--~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~ 299 (329)
T 3oq3_B 224 PSQDHRFKLILDP--KINVTIGEPANITCTA--VSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFEN 299 (329)
T ss_dssp CCCCCCEEEECCS--EEEECTTSCEEEEEEE--EETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESS
T ss_pred CCCCCCCceecCC--eeEEecCCCEEEEEEE--EECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEe
Confidence 5552 222 2444679999999997 3332 233 3344444322 1100 0 10 00 0236799999
Q ss_pred CCCCCcc-EEEEEEEEEcCCCcCCceeeeee
Q psy11549 218 LGLDGTV-LMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 218 ~~l~~~~-~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
++.+|.| .| +|.|.|..|....+..+.+
T Consensus 300 v~~~D~G~~Y--~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 300 VTEEYIGNTY--TCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CCGGGTTCEE--EEEEECSSCEEEEEEEEEE
T ss_pred ccHHHCCCcE--EEEEEecCCceEEEEEEEe
Confidence 9999999 99 9999999998776655543
No 15
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.94 E-value=1.7e-26 Score=183.17 Aligned_cols=239 Identities=19% Similarity=0.260 Sum_probs=157.4
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccC-CCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKV-SRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~-~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
+|||++|......+....+++|.|.++ +.+|+|.|+|.|.|..|...+..+.|.|.+.+.+.......+.+..|+.+.|
T Consensus 43 ~k~g~~l~~~~~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l 122 (384)
T 3kld_A 43 KLNGTDVDIGMDFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVL 122 (384)
T ss_dssp EETTEECCC----CEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEE
T ss_pred EECCEECcCCCCccEEEECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEE
Confidence 589999975544456667889999887 7899999999999999887666788888776654433323367889999999
Q ss_pred EEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe---eEEEEEEeC--
Q psy11549 80 HCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT---PCLYQVVLA-- 154 (261)
Q Consensus 80 ~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~---~~~~~v~~~-- 154 (261)
.|.+....+...+.|++++.. ......++. ......|.|.++..+|+|.|+|.|.|..+.... ...+.+...
T Consensus 123 ~C~~~~~~~~~~~~W~~~~~~--~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~ 199 (384)
T 3kld_A 123 LCGPPPHSGELSYAWIFNEYP--SYQDNRRFV-SQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV 199 (384)
T ss_dssp CCCCCSEESCEEEEEEETTEE--CCCSSSEEE-CTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE
T ss_pred ecCCCCCCCCeEEEEEECCCC--CEeeccEEE-EcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCc
Confidence 997653333348999997742 222233332 223346999999999999999999998764321 112222110
Q ss_pred ---CCCC----CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEE
Q psy11549 155 ---GKPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMR 227 (261)
Q Consensus 155 ---~~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~ 227 (261)
..|. .|.. +....|+.+.|.|.+ .+.|...+.|++..+...............|.|.+++.+|.|.|
T Consensus 200 ~~~~~p~~~~~~~~~--~~~~~G~~v~l~C~~---~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y- 273 (384)
T 3kld_A 200 MGEYEPKIEVQFPET--VPAEKGTTVKLECFA---LGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSY- 273 (384)
T ss_dssp CCCEEEEEEEECCSE--EEEETTSCEEEEEEE---EEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEE-
T ss_pred ccccCCceeecCCCc--eEecCCCcEEEEEEE---eecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEE-
Confidence 1111 2222 333569999999997 44454444555533221101111123346899999999999999
Q ss_pred EEEEEEcCCCcCCceeeeeeee
Q psy11549 228 VVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 228 ~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
+|.|.|..|....+..+.+..
T Consensus 274 -~C~a~N~~G~~~~~~~l~v~~ 294 (384)
T 3kld_A 274 -ECVAENSRGKNVAKGQLTFYA 294 (384)
T ss_dssp -EEEEEETTEEEEEEEEEEEEE
T ss_pred -EEEEEcCCCeEEEEEEEEEec
Confidence 999999999877666666554
No 16
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.94 E-value=2.8e-27 Score=182.78 Aligned_cols=239 Identities=14% Similarity=0.091 Sum_probs=150.9
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||++|..+........+.+|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|...|.+...... ..+..|+.+.|.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~~~~~~~~~~~-~~~~~g~~~~l~ 119 (317)
T 2y25_A 42 YKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKD-KSRLKLVDEAFKELMMEVCK-KIALSATDLKIQ 119 (317)
T ss_dssp EETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEE-EEEECCSTHHHHHHHHHHHH-HHHTCBCCCEEE
T ss_pred EECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcE-EEEEEEEEecCccccccCCc-eecccCCCeEEE
Confidence 4788888744432333334599999999999999999999998876 45566665544432211111 223456666666
Q ss_pred EEEee----------CCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 81 CAVEA----------DPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 81 C~~~~----------~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
|.+.+ .|.+ .+.|++++.... ......+........|.|.++..+|+|.|+|.+.|..|.......+.
T Consensus 120 c~~~~~~l~c~~~~~~p~~-~i~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 197 (317)
T 2y25_A 120 STAEGIQLYSFVTYYVEDL-KVNWSHNGSAIR-YSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 197 (317)
T ss_dssp ECSSEEEEEEEBSSCCSSC-EEEEEESSSBCC-CCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred eeccccEEEEEeccCCCCc-EEEEEECCEECC-CCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEe
Confidence 66554 4555 899999875322 12222334455556799999999999999999999888776643333
Q ss_pred EEe----------------CC--CCC----CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEe
Q psy11549 151 VVL----------------AG--KPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLT 206 (261)
Q Consensus 151 v~~----------------~~--~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~ 206 (261)
+.. .. +|. .|.. +....|+.+.|.|.+ . +.|.....|+++...... .+...
T Consensus 198 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~v~~g~~~~l~C~~--~-g~p~p~i~W~~~g~~~~~~~~~~~~ 272 (317)
T 2y25_A 198 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDV--VTIQEGKALNLTCNV--W-GDPPPEVSWLKNEKALASDDHCNLK 272 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSE--EEEETTSBBCEEEEE--E-CSSCCEEEEEESSSEECCCSSEEEC
T ss_pred eeeccccchhhcccCCcccCcCCCCcccccCCcc--EEEEcCCEEEEEEEE--e-cCCCCEEEEEECCEeCCCCCcEEEE
Confidence 211 00 110 1222 333569999999997 3 444333444554332211 11111
Q ss_pred c--CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 207 N--LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 207 ~--~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
. .....|.|.+++..|+|.| +|.|.|..|....+..+.+..+
T Consensus 273 ~~~~~~~~L~i~~v~~~d~G~Y--~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 273 FEAGRTAYFTINGVSTADSGKY--GLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp CBTTTEEEEEEBSCCSTTCEEE--EEEEEETTEEEEEEEEEEEECC
T ss_pred EcCCCEEEEEECCCCHHHCEEE--EEEEEeCCCeEEEEEEEEEEcC
Confidence 1 2224899999999999999 9999999998887777777643
No 17
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.94 E-value=1e-25 Score=194.75 Aligned_cols=238 Identities=19% Similarity=0.286 Sum_probs=167.4
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCC-CCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVS-RQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~-~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
+|||+++..+ .+.....+++|.|.++. .+|+|.|+|.|.|..|...+..+.|.|..+|.+.........+..|+.++|
T Consensus 561 ~k~~~~l~~~-~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L 639 (816)
T 3dmk_A 561 ERDNRALPIN-RKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTL 639 (816)
T ss_dssp EETTEESCCS-TTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEE
T ss_pred EECCeEcccC-CceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEE
Confidence 4788888654 34556678899999998 699999999999999876566788888887766543322245779999999
Q ss_pred EEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC-
Q psy11549 80 HCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ- 158 (261)
Q Consensus 80 ~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~- 158 (261)
.|.+.+.+++..+.|++++..................+.|.|.++..+|+|.|+|.|.|..|.......+.| ..+|.
T Consensus 640 ~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V--~~~P~~ 717 (816)
T 3dmk_A 640 HCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNV--YVPPRW 717 (816)
T ss_dssp EEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECE--EEEEEE
T ss_pred EEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEE--EeCCce
Confidence 999987777668999998753211111111123345668999999999999999999999988877544444 34443
Q ss_pred --CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE------EEecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 159 --PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV------NLTNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 159 --~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
.|....+ ..|+.+.|.|.+ .+..++.+.| ++.....+... .........|.|.+++..|.|.| +|
T Consensus 718 ~~~~~~~~v--~~G~~v~l~C~~--~g~P~p~i~W-~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C 790 (816)
T 3dmk_A 718 ILEPTDKAF--AQGSDAKVECKA--DGFPKPQVTW-KKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYY--LC 790 (816)
T ss_dssp EECCCCEEE--ETTCCEEEECEE--EEESCCEEEC-CEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEE--EE
T ss_pred eeeccccee--cCCCcEEEEEEE--ecCCCCeEEE-EecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEE--EE
Confidence 3444333 469999999997 3333344444 44432211000 00011236899999999999999 99
Q ss_pred EEEcCCCcCCceeeeeee
Q psy11549 231 SGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~~~ 248 (261)
.|.|.+|.+..+..+.+.
T Consensus 791 ~a~N~~G~~~~~v~~~~~ 808 (816)
T 3dmk_A 791 EAINGIGSGLSAVIMISV 808 (816)
T ss_dssp EEECSSSSCEEEEEEEEE
T ss_pred EEEeCCCCCcEEEEEEEe
Confidence 999999998887777665
No 18
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.94 E-value=2.2e-25 Score=183.62 Aligned_cols=239 Identities=15% Similarity=0.135 Sum_probs=162.2
Q ss_pred CCeeccCCCCceEEEECCeEEEccCCCCCCE-eEEEEEEeCCCcceeeeEEEEEE----eeceeecCceeEEEeeCCCcE
Q psy11549 3 GGIPLAHNTSARIILSNQSLVLQKVSRQSAG-TYKCSAINTKGEATSNQLKLRVK----YAPICKSDRIVIVGASRSESV 77 (261)
Q Consensus 3 ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~~~~~~~~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~ 77 (261)
||+++.. +.+.....+++|.|.+++.+|+| .|+|.|.|..+...+..+.|.|. .+|.+...+.. ..+..|+.+
T Consensus 152 ~g~~l~~-~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~-~~v~~G~~v 229 (524)
T 2ec8_A 152 QGKPLPK-DLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKAS-YLLREGEEF 229 (524)
T ss_dssp SSCCCCS-SCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSE-EEEETTSCE
T ss_pred CCcCcCC-CCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCc-ceEEcCCcE
Confidence 8888864 33455556789999999999999 99999999877665667888887 66777655544 578899999
Q ss_pred EEEEEEeeCCCCceeEEEEcCCccccccCC-ceEE---eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 78 DIHCAVEADPPARSFKWKFNNSGETLDVGS-ERFS---SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 78 ~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
.|.|.+.+.|.+..+.|++++....+.... ..+. .......|.|.++..+|+|.|+|.|.|..|..... +.+.|
T Consensus 230 ~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~--~~l~V 307 (524)
T 2ec8_A 230 TVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVT--TTLEV 307 (524)
T ss_dssp EEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEE--EEEEE
T ss_pred EEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEE--EEEEE
Confidence 999999998888569999988532111111 1111 11234589999999999999999999998887764 44455
Q ss_pred CCCCCC---CC-cceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce---eEEEecC-----CCCcEEEcCCCCC
Q psy11549 154 AGKPQP---PQ-NCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL---LVNLTNL-----DTPAFTLEDLGLD 221 (261)
Q Consensus 154 ~~~p~~---p~-~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~i~~~~l~ 221 (261)
..+|.. |. ...+....|+.+.|.|.+ .+..++....|+++...... .+..... ....|.|.++..+
T Consensus 308 ~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~--~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 385 (524)
T 2ec8_A 308 VDKGFINIFPMINTTVFVNDGENVDLIVEY--EAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGT 385 (524)
T ss_dssp ESSCEEEEEESSCSEEEECTTCCEEEEEEE--EEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGG
T ss_pred eccCceEeecCCCceEEEcCCCcEEEEEEE--eecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcc
Confidence 455531 11 123444679999999997 33333332444444332211 1111111 1257999999999
Q ss_pred CccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 222 GTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 222 ~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
|.|.| +|.|.|..|....+..+.+..
T Consensus 386 d~G~Y--~C~a~N~~g~~~~~~~l~V~~ 411 (524)
T 2ec8_A 386 EGGTY--TFLVSNSDVNAAIAFNVYVNT 411 (524)
T ss_dssp GCEEE--EEEEECSSCEEEEEEEEEECE
T ss_pred cCeEE--EEEEEecCceEEEEEEEEEec
Confidence 99999 999999999877766666653
No 19
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=173.52 Aligned_cols=234 Identities=11% Similarity=0.094 Sum_probs=151.3
Q ss_pred CCCCeeccCCCCceEEEEC--CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe------------eceeecCce
Q psy11549 1 MAGGIPLAHNTSARIILSN--QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY------------APICKSDRI 66 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~--~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~------------~p~~~~~~~ 66 (261)
+|||+++..+.+-.....+ .+|.|.+++.+|+|.|+|.+.|..|... .+.|.|.. +|.+.....
T Consensus 37 ~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~--s~~l~v~~~~~~~~~~~~~~~p~~~~~~~ 114 (312)
T 2y23_A 37 SKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS--SYLIDEEELKRLLALSHEHKFPTVPVKSE 114 (312)
T ss_dssp EETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE--EEEECHHHHHHHHHHHHHHHSCBCCEEEE
T ss_pred EECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE--EEEEEEeeeeeeecccccCCCCccccccC
Confidence 5889999754433333333 4999999999999999999999888653 45566643 444433332
Q ss_pred eEEEeeCCCcEEEEEEEe-eCCCCceeEEEEcCCcccccc-CCceEEe--CCceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 67 VIVGASRSESVDIHCAVE-ADPPARSFKWKFNNSGETLDV-GSERFSS--GSRGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 67 ~~~~~~~g~~~~l~C~~~-~~~~~~~~~W~~~~~~~~~~~-~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
....+..|+.+.|.|.+. +.|.+ .+.|++++.. +.. ....+.. ......|.|.++..+|+|.|+|.+.+..+.
T Consensus 115 ~~~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~~~~--i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~ 191 (312)
T 2y23_A 115 LAVEILEKGQVRFWMQAEKLSGNA-KVNYIFNEKE--IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKAT 191 (312)
T ss_dssp EEEEECSSSCEEEEEEESCCCSSC-EEEEEETTEE--ECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCE
T ss_pred CceEEeeCCCEEEEEEEEeCCCCC-EEEEEECCEE--CeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCce
Confidence 247788999999999999 66666 8999998742 222 1222222 244556999999999999999999875444
Q ss_pred EEeeEEEEEEeC----------------CCCCCCC---cceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCcccee
Q psy11549 143 QVTPCLYQVVLA----------------GKPQPPQ---NCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLL 202 (261)
Q Consensus 143 ~~~~~~~~v~~~----------------~~p~~p~---~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~ 202 (261)
... .+.+... ....+|. ........|+.+.|.|.+ .+..+. .+. |+++.......
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~--~~~p~~~~v~-W~~~g~~~~~~ 266 (312)
T 2y23_A 192 NHS--TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKV--ANIKKETHIV-WYKDEREISVD 266 (312)
T ss_dssp EEE--EEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEE--ESCCSSCEEE-EEETTEEEEEE
T ss_pred EEE--EEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEE--cCCCCCCEEE-EeeCCEECCCC
Confidence 333 2222100 0001121 112334579999999997 443344 444 44433222111
Q ss_pred --EEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 203 --VNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 203 --~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.... .....|.|.++..+|.|.| +|.|.|..|....+..+.+
T Consensus 267 ~~~~~~-~~~~~L~I~~v~~~d~G~Y--~C~a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 267 EKHDFK-DGICTLLITEFSKKDAGIY--EVILKDDRGKDKSRLKLVD 310 (312)
T ss_dssp CCC-----CEEEEEECSCSGGGCEEE--EEEEESTTCCEEEEEEECS
T ss_pred CcEEEE-CCEEEEEECcCCHHHCEEE--EEEEEcCCCceeeeeEEEe
Confidence 1111 2236899999999999999 9999999998877766654
No 20
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.94 E-value=7.5e-26 Score=174.61 Aligned_cols=221 Identities=14% Similarity=0.155 Sum_probs=148.6
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEe-eCCCCceeEEEEc
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVE-ADPPARSFKWKFN 97 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~W~~~ 97 (261)
+.+|.|.+++.+|+|.|+|.+.+..+...+..+.|.|...|........ ..+..++.+.+.|.+. +.|.+ .+.|+++
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~-~~~~~~~~~~~~C~~~~~~P~~-~i~W~~~ 155 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQK-VQLTGEPVPMARCVSTGGRPPA-QITWHSD 155 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECC-BCCCSSCEEEEEEEEEEEBSCC-EEEEEET
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccc-eEeecCceEEEEEEccCccCCc-EEEeecC
Confidence 4579999999999999999987654444466778888777765543332 4456788889999876 55656 8999998
Q ss_pred CCccccccCCceEEe--CC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC----CCCcceEEee
Q psy11549 98 NSGETLDVGSERFSS--GS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ----PPQNCSVRNE 168 (261)
Q Consensus 98 ~~~~~~~~~~~~~~~--~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~----~p~~~~v~~~ 168 (261)
+..... . ..... .+ ..+.|.|.....+|.|.|+|.|.|..+.......+.+.+..+|. ++.... ..
T Consensus 156 ~~~~~~--~-~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~--~~ 230 (313)
T 4fqp_A 156 LGGMPN--T-SQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNW--YL 230 (313)
T ss_dssp TCCEEE--E-EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCE--ET
T ss_pred Cccccc--c-ceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCcccccccccee--ec
Confidence 753221 1 11111 11 12368889999999999999999987665554455566655553 111111 24
Q ss_pred cCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 169 TTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 169 ~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.|+.++|.|.+ . +.|.. -+.|++........... ....|.|.++...|+|.| +|.|.|.+|....+..+.|
T Consensus 231 ~g~~v~l~C~~--~-g~P~p~~v~W~~~~~~l~~~~~~---~~~~L~i~~v~~~d~G~Y--~C~a~N~~G~~~~~~~l~V 302 (313)
T 4fqp_A 231 GQNEATLTCDA--R-SNPEPTGYNWSTTMGPLPPFAVA---QGAQLLIRPVDKPINTTL--ICNVTNALGARQAELTVQV 302 (313)
T ss_dssp TCCCEEEEEEE--E-EESCCCEEEEEETTBSCCTTEEE---ETTEEEECCCSSCCEEEE--EEEEECSSCEEEEEEEEEE
T ss_pred CCCeEEEEEEe--c-CCCCCcEEEEEECCEECCCceEE---eCCEEEECcCChhhCEEE--EEEEEeCCCcEEEEEEEEE
Confidence 57889999997 3 34433 23445554333211111 236899999999999999 9999999999888888888
Q ss_pred eeccccc
Q psy11549 248 SMSGAHY 254 (261)
Q Consensus 248 ~~~~~~~ 254 (261)
..++|+.
T Consensus 303 ~~~PP~~ 309 (313)
T 4fqp_A 303 KEGPPHH 309 (313)
T ss_dssp ECCC---
T ss_pred EeCCCCC
Confidence 7766654
No 21
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.94 E-value=1e-24 Score=183.86 Aligned_cols=220 Identities=19% Similarity=0.276 Sum_probs=154.5
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||++|..+........+++|.|.+++.+|+|.|+|.|.|..+...+..+.|.|.++|...........+..|+.+.|.
T Consensus 145 ~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~ 224 (642)
T 1e07_A 145 WVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLS 224 (642)
T ss_pred EECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEE
Confidence 57899997544433334467999999999999999999999988765677889998665432211122457799999999
Q ss_pred EEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCC
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPP 160 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p 160 (261)
|.+.+.|.+ .+.|++++.. +. ....|.|.++..+|+|.|+|.+.|..|....+..+.+.+..+|.+|
T Consensus 225 C~~~g~p~~-~i~W~~~g~~--i~----------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p 291 (642)
T 1e07_A 225 CHAASNPPA-QYSWFVNGTF--QQ----------STQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKP 291 (642)
T ss_pred EEcCCCCCc-EEEEEECCeE--cc----------cCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCC
Confidence 999888887 8999998742 21 1236999999999999999999998887665555666665544433
Q ss_pred Ccc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 161 QNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 161 ~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
... ......++.+.|.|.+ . +.|..+.|+ ++...... ..... .....|.|.++...|.|.| +|.|.|.
T Consensus 292 ~i~~~~~~~~~~g~~v~l~C~~--~-~~p~~v~W~-~~g~~l~~~~~~~~~-~~~~~L~i~~~~~~d~G~Y--~C~a~n~ 364 (642)
T 1e07_A 292 FITSNNSNPVEDEDAVALTCEP--E-IQNTTYLWW-VNNQSLPVSPRLQLS-NDNRTLTLLSVTRNDVGPY--ECGIQNE 364 (642)
T ss_pred EEEcCCceeEecCCcEEEEEEC--C-CCCccEEEE-ECCccCCCcCCEEEe-CCCCEEEEeccCcccCeeE--EEEEeCC
Confidence 210 1112347779999997 3 335445444 44322211 11222 2347899999999999999 9999999
Q ss_pred CCcCC
Q psy11549 236 KGRSL 240 (261)
Q Consensus 236 ~G~~~ 240 (261)
.|...
T Consensus 365 ~g~~~ 369 (642)
T 1e07_A 365 LSVDH 369 (642)
T ss_pred CCCcc
Confidence 98643
No 22
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.94 E-value=2.3e-25 Score=177.57 Aligned_cols=241 Identities=19% Similarity=0.222 Sum_probs=162.4
Q ss_pred CCCCeeccCC-CCceEEEECCeEEEccC-----CCCCCEeEEEEEEeC-CCcceeeeEEEEEEeeceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHN-TSARIILSNQSLVLQKV-----SRQSAGTYKCSAINT-KGEATSNQLKLRVKYAPICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~-~~~~~~~~~~~L~i~~~-----~~~D~G~Y~C~~~~~-~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~ 73 (261)
+|||.++... ..+.....+++|.|.++ +.+|+|.|+|.+.+. .+...+..+.|.|..+|.+...... ..+..
T Consensus 57 ~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~-~~~~~ 135 (403)
T 3laf_A 57 KKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTES-ITAFM 135 (403)
T ss_dssp EETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCC-EEEET
T ss_pred EECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCc-EEEEc
Confidence 4789998643 45566677889999988 678999999999865 4444466788888887777655544 77889
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
|+.+.|.|.+.+.|.+ .+.|++++..........+..... ...|.|.++..+|+|.|+|.+.|..+..... .+.+.+
T Consensus 136 G~~v~l~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~-~~~l~v 212 (403)
T 3laf_A 136 GDTVLLKCEVIGDPMP-TIHWQKNQQDLNPIPGDSRVVVLP-SGALQISRLQPGDSGVYRCSARNPASTRTGN-EAEVRI 212 (403)
T ss_dssp TSCEEECCCEECSSCC-EEEEEESSSBCCCCTTCCSEEECT-TSCEEECSCCGGGCEEEEEEEECSSCCCBCC-CEEEEE
T ss_pred CCeEEEEEEEcccCCC-eEEEEECCEeccccCCceEEEEcC-CceEEEcccccccCEEEEEEEEcCCCceecc-ceeEEE
Confidence 9999999999988887 899999875322112222222222 2369999999999999999999987653321 233333
Q ss_pred CCCCCCCCc-------ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcccee-EEEecCCCCcEEEcCCCCCCccE
Q psy11549 154 AGKPQPPQN-------CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLL-VNLTNLDTPAFTLEDLGLDGTVL 225 (261)
Q Consensus 154 ~~~p~~p~~-------~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~~~ 225 (261)
...|..+.. ..+....|+.+.|.|.+ .+..+..+. |++........ ..........|.|.+++..|.|.
T Consensus 213 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~--~~~p~~~~~-W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 289 (403)
T 3laf_A 213 LSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCV--SGYPPPSFT-WLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGT 289 (403)
T ss_dssp ECCCCCCEEEEEEECCCCEEEETTSCEEECCEE--EEESCCEEE-EEETTEECCCSSSSEEEETTTEEEECSCCGGGCEE
T ss_pred ecCCCcccCceEecCCCceEecCCCcEEEEEEc--CCCCCCeEE-EEECCeeccCCCceEEECCccEEEEeCCCHHHCEE
Confidence 344432211 11223469999999997 333334444 44432221100 01111234679999999999999
Q ss_pred EEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 226 MRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 226 Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
| +|.|.|..|....+..+.+..+
T Consensus 290 Y--~C~a~n~~g~~~~~~~l~V~~~ 312 (403)
T 3laf_A 290 Y--TCVVTYKNENISASAELTVLVP 312 (403)
T ss_dssp E--EEEEEETTEEEEEEEEEEEEEE
T ss_pred E--EEEEEcCCCceEEEEEEEEECC
Confidence 9 9999999998777766666543
No 23
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.94 E-value=3.6e-25 Score=175.35 Aligned_cols=237 Identities=18% Similarity=0.205 Sum_probs=161.5
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCC-CCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSR-QSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
+|||.+|......+....+++|.|.++.. +|+|.|+|.|.|..|...+..+.|.|...|.+.........+..|+.+.|
T Consensus 42 ~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l 121 (382)
T 1cs6_A 42 KMNGTELKMGPDSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMF 121 (382)
T ss_dssp EETTEECCCSTTSSEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEE
T ss_pred EECCEECCcCCCccEEeeCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEE
Confidence 58999997654556667789999999997 99999999999998876566788888877765544333367889999999
Q ss_pred EEEEe-eCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe-----eEEEEEEe
Q psy11549 80 HCAVE-ADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT-----PCLYQVVL 153 (261)
Q Consensus 80 ~C~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-----~~~~~v~~ 153 (261)
.|.+. +.|.+ .+.|++++......... +.........|.|.++..+|+|.|+|.+.+..+.... ...+.+..
T Consensus 122 ~C~~~~~~p~~-~i~W~~~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~ 199 (382)
T 1cs6_A 122 TCSPPPHYPAL-SYRWLLNEFPNFIPADG-RRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAA 199 (382)
T ss_dssp CCCCCSEESCC-EEEEEESSTTCBCCCCS-SEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred EeCCCCCCCCc-EEEEEECCCccccccCc-eEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccch
Confidence 99864 44555 89999987533222222 2233333347999999999999999999987642221 12233321
Q ss_pred CC----CCC----CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccE
Q psy11549 154 AG----KPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVL 225 (261)
Q Consensus 154 ~~----~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 225 (261)
.. +|. .|. ......|+.+.|.|.+ . +.|.....|++....... ........|.|.+++..|.|.
T Consensus 200 ~~~~~~~P~~~~~~~~--~~~~~~G~~v~l~C~~--~-g~p~~~i~W~~~~~~~~~---~~~~~~~~L~i~~~~~~d~G~ 271 (382)
T 1cs6_A 200 EDARQYAPSIKAKFPA--DTYALTGQMVTLECFA--F-GNPVPQIKWRKLDGSQTS---KWLSSEPLLHIQNVDFEDEGT 271 (382)
T ss_dssp CCCCCEEEEEEECCCS--EEEEETTCCEEEECEE--E-EESCCEEEEEECCSCCSC---CCSBSSSEEEECSCCGGGCEE
T ss_pred hhcccCCCceeccCCC--ceEEeCCCeEEEEEEE--c-cCCCCEEEEEECCccccc---EEecCCcEEEEccCChhhCEE
Confidence 11 121 122 2334569999999997 3 334333444444333211 112345789999999999999
Q ss_pred EEEEEEEEcCCCcCCceeeeeeee
Q psy11549 226 MRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 226 Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
| +|.|.|..|....+..+.+..
T Consensus 272 Y--~C~a~n~~g~~~~~~~l~V~~ 293 (382)
T 1cs6_A 272 Y--ECEAENIKGRDTYQGRIIIHA 293 (382)
T ss_dssp E--EEEEEETTEEEEEEEEEEEEE
T ss_pred E--EEEEEcCCCeEEEEEEEEEec
Confidence 9 999999999876666665543
No 24
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.94 E-value=1.7e-25 Score=177.23 Aligned_cols=228 Identities=18% Similarity=0.223 Sum_probs=153.3
Q ss_pred CCCCeeccC-CCCceEE-EECCeEEEccCCCCCCEeEEEEEEeCCCcc----eeeeEEEEEE------eeceeecCceeE
Q psy11549 1 MAGGIPLAH-NTSARII-LSNQSLVLQKVSRQSAGTYKCSAINTKGEA----TSNQLKLRVK------YAPICKSDRIVI 68 (261)
Q Consensus 1 ~~ng~~l~~-~~~~~~~-~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~----~s~~~~l~V~------~~p~~~~~~~~~ 68 (261)
+|||.++.. .+.+... ..+++|.|.+++.+|+|.|+|.+.|..+.. .+..+.|.|. .+|.+.......
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~ 216 (382)
T 1cs6_A 137 LLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPAD 216 (382)
T ss_dssp EESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSE
T ss_pred EECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCc
Confidence 366766532 2233333 234799999999999999999999887532 1233455543 355554332223
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.|.+ .+.|++++.. +. . . .......|.|.++..+|+|.|+|.+.|..|.......
T Consensus 217 ~~~~~G~~v~l~C~~~g~p~~-~i~W~~~~~~--~~--~-~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 288 (382)
T 1cs6_A 217 TYALTGQMVTLECFAFGNPVP-QIKWRKLDGS--QT--S-K--WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGR 288 (382)
T ss_dssp EEEETTCCEEEECEEEEESCC-EEEEEECCSC--CS--C-C--CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCeEEEEEEEccCCCC-EEEEEECCcc--cc--c-E--EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 678899999999999998887 8999997743 11 1 1 1223447999999999999999999999888666444
Q ss_pred EEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEecCCCCcEEEcCCCCCCc
Q psy11549 149 YQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTNLDTPAFTLEDLGLDGT 223 (261)
Q Consensus 149 ~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~l~~~ 223 (261)
+.+ ..+|. .+....+ ..|+.+.|.|.+ .+..++.+ .|+++...... .... ....|.|.++..+|.
T Consensus 289 l~V--~~~p~~~~~~~~~~~--~~g~~~~l~C~~--~g~p~p~v-~W~~~g~~~~~~~~~~~---~~~~L~i~~v~~~d~ 358 (382)
T 1cs6_A 289 III--HAQPDWLDVITDTEA--DIGSDLRWSCVA--SGKPRPAV-RWLRDGQPLASQNRIEV---SGGELRFSKLVLEDS 358 (382)
T ss_dssp EEE--EEEEEEEECCCCEEE--ETTCCEEEECEE--EEESCCEE-EEEETTEECCCCSSEEE---ETTEEEESSCCGGGC
T ss_pred EEE--ecCCCcccCCCccEE--cCCCeEEEEEEe--eeecCCEE-EEEECCEECCCCceEEE---ECCEEEECcCCcccC
Confidence 444 34443 3333333 569999999997 33333444 44444322211 1111 236899999999999
Q ss_pred cEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 224 VLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
|.| +|.|.|..|....+..+.|.
T Consensus 359 G~Y--~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 359 GMY--QCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEE--EEEEEETTEEEEEEEEEEEE
T ss_pred EEE--EEEEEeCCCeEEEEEEEEEe
Confidence 999 99999999988777766653
No 25
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.94 E-value=1.9e-26 Score=177.58 Aligned_cols=222 Identities=14% Similarity=0.130 Sum_probs=146.3
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceee--cCceeEEEeeCCCcEEEEEEE-eeCCCCceeEEE
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICK--SDRIVIVGASRSESVDIHCAV-EADPPARSFKWK 95 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~--~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~W~ 95 (261)
+.+|.|.+++.+|+|.|+|.|.|..+...+..+.+.+...|... ..... .....|+.+.|.|.+ .+.|.+ .+.|+
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~l~C~~~~g~P~~-~i~W~ 150 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDS-LIDGGNETVAAICIAATGKPVA-HIDWE 150 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSC-CCTTCSCEEEEEEEEEEEBSCC-EEEEC
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccce-eEEcCCceEEEEEEecCCcCCc-eEEEE
Confidence 35899999999999999999998755444666777777655432 11221 345568899999976 466666 89999
Q ss_pred EcCCccccccCCceEEe----CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC---CCCcceEEee
Q psy11549 96 FNNSGETLDVGSERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSVRNE 168 (261)
Q Consensus 96 ~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v~~~ 168 (261)
+++.... ...... ....+.|.|..+..+|.|.|+|.|.|..+.......+.+.+..+|. .+.... ...
T Consensus 151 ~~~~~~~----~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~-~~~ 225 (308)
T 4fom_A 151 GDLGEME----STTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGN-WFV 225 (308)
T ss_dssp CCSSBCC----EEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSC-EET
T ss_pred ECCcccc----cccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEccccee-eee
Confidence 8774311 111111 1113468999999999999999999987765554456666655553 111111 224
Q ss_pred cCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 169 TTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 169 ~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.++.+.|.|.+ .+..++..+.|++........ ........+.|.+++.+|+|.| +|.|.|.+|....+..+.|.
T Consensus 226 ~g~~v~l~C~~--~g~P~p~~v~W~k~~~~~~~~--~~~~~~~~l~i~~v~~~d~G~Y--~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 226 GRKGVNLKCNA--DANPPPFKSVWSRLDGQWPDG--LLASDNTLHFVHPLTFNYSGVY--ICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp TCCSCEEECCE--EEESCEEEEECCBSSSCCCSS--CBCSTTEEECCSCCCSCCCSEE--EEEEEETTEEEEEEEECCEE
T ss_pred ccccEEEEEEE--ecCCCCcEEEEEECCeECCCc--EEEcCCeEEEECCCChhhCEEE--EEEEEeCCCcEEEEEEEEEE
Confidence 58899999997 433334334455544332211 1122334566788889999999 99999999998888888877
Q ss_pred ecccc
Q psy11549 249 MSGAH 253 (261)
Q Consensus 249 ~~~~~ 253 (261)
.++.+
T Consensus 300 ~~P~~ 304 (308)
T 4fom_A 300 DPPHH 304 (308)
T ss_dssp CCC--
T ss_pred cCCCC
Confidence 65443
No 26
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.93 E-value=2.6e-25 Score=169.74 Aligned_cols=227 Identities=12% Similarity=0.117 Sum_probs=148.2
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEE
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C 81 (261)
|||.++ ......+++|.|.+++.+|+|.|+|.+.| |. +..+.|.|..+|........ ..+..|+.+.|.|
T Consensus 44 ~~~~~~-----~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n--g~--~~~~~l~V~~~~~~~~~~~~-~~~~~g~~v~l~C 113 (290)
T 2o26_X 44 FKTYFN-----EMVENKKNEWIQEKAEATRTGTYTCSNSN--GL--TSSIYVFVRDPAKLFLVGLP-LFGKEDSDALVRC 113 (290)
T ss_dssp EECSSS-----CEEEECSSEEEETTCCGGGCEEEEEEESS--SC--EEEEEEEEECSSCCBCCCCC-EEEETTSCEEECC
T ss_pred cCCcce-----eeecCCCceEEEeccCHHhCeEEEEEeeC--Cc--cEEEEEEEeCCCcccccccc-eEEecCCeEEEeC
Confidence 555555 12233457999999999999999999998 43 56788999887776643333 6778999999999
Q ss_pred EEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCe-EEEEEEEcCCceEEe-eEEEEEE--eCCCC
Q psy11549 82 AVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYG-TLSCAAQNAIGTQVT-PCLYQVV--LAGKP 157 (261)
Q Consensus 82 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~~-~~~~~v~--~~~~p 157 (261)
.+.+ |....+.|++.+. ..+. ...++..... ..|.|.++..+|+| .|+|.|.|..+.... ...+.+. ...+|
T Consensus 114 ~~~~-p~~~~v~W~~~~g-~~l~-~~~~~~~~~~-~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P 189 (290)
T 2o26_X 114 PLTD-PQVSQYSLIECDG-KSLP-TDLTFVPNPK-AGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIP 189 (290)
T ss_dssp CBSC-CSCEEEEEEETTS-CCCC-TTCEEEEETT-TEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCC
T ss_pred cCCC-CCCceEEEEeCCC-cCCC-CCCceeeCCC-CCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCC
Confidence 9985 5523899965332 2232 2233333322 36999999999999 999999998554332 2334333 11333
Q ss_pred C---CCCcceEEeecCCeEEEEeecCCCCCCCeEE-EEEEEeCCcc----cee--EEE----ecCCCCcEEEcCCCCCCc
Q psy11549 158 Q---PPQNCSVRNETTSSVHISCTPGYDGGLPQTF-TLELYSASDL----NLL--VNL----TNLDTPAFTLEDLGLDGT 223 (261)
Q Consensus 158 ~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~-~~~~~~~~~~----~~~--~~~----~~~~~~~~~i~~~~l~~~ 223 (261)
. .|... ....|+.+.|.|.+ . +.|... ..|++..... ... ... .......|.|.+++.+|+
T Consensus 190 ~i~~~~~~~--~v~~G~~v~l~C~~--~-g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~ 264 (290)
T 2o26_X 190 VVSVPETSH--LLKKGDTFTVVCTI--K-DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDS 264 (290)
T ss_dssp EEECSCSBC--CCCTTCCEEEEEEE--E-ESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSC
T ss_pred ccccCCCcc--eEecCCcEEEEEEE--e-cCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccC
Confidence 2 22222 23569999999998 3 334332 3444444331 100 000 112236899999999999
Q ss_pred cEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 224 VLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
|.| +|.|.|..|....+..+.+..
T Consensus 265 G~Y--~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 265 GVF--MCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp EEE--EEEEECSSCEEEEEEEECC--
T ss_pred eEE--EEEEeCCCCcEEEEEEEEEEe
Confidence 999 999999999887666666643
No 27
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.93 E-value=1.7e-25 Score=172.71 Aligned_cols=237 Identities=15% Similarity=0.170 Sum_probs=152.3
Q ss_pred CCCCeecc--CCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE-eeceeecCc--eeEEEeeCCC
Q psy11549 1 MAGGIPLA--HNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK-YAPICKSDR--IVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~-~~p~~~~~~--~~~~~~~~g~ 75 (261)
+|||.++. .....+....+++|.|.+++.+|+|.|+|.+.|..+.. ...+.+.|. .+|.+.... .....+..|+
T Consensus 41 ~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~-~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~ 119 (315)
T 1itb_B 41 YKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCL-RIKISAKFVENEPNLCYNAQAIFKQKLPVAG 119 (315)
T ss_dssp ECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCC-CEECCCEEECCCTTSSSCGGGEEEEEEETTS
T ss_pred EeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEE-EEEEEEEEeCCCCCcccccccccceEEecCC
Confidence 46776543 22334555567799999999999999999999988765 344445543 333332111 1225678999
Q ss_pred cEEEEEEE------eeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE-cCCceEEe-eE
Q psy11549 76 SVDIHCAV------EADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ-NAIGTQVT-PC 147 (261)
Q Consensus 76 ~~~l~C~~------~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-~~~~~~~~-~~ 147 (261)
.+.|.|.+ .+.|.+ .+.|++++.. +.....++..... .|.|.++..+|+|.|+|.+. +..|.... ..
T Consensus 120 ~v~l~C~~~~~~~~~g~p~~-~i~W~k~~~~--l~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~ 194 (315)
T 1itb_B 120 DGGLVCPYMEFFKNENNELP-KLQWYKDCKP--LLLDNIHFSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITR 194 (315)
T ss_dssp CEEEECSSCTTTCTTTTCCC-CCEEEETTEE--CCCCSSSEEEETT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred CeEEEEecccccccCCCCCC-EEEEEECCEE--CCCccceEeecCc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEE
Confidence 99999998 677767 8999998743 2222333333333 79999999999999999999 67776532 22
Q ss_pred EEEEEeC--CCCCCCC-----cceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc-------eeEEEecC-----
Q psy11549 148 LYQVVLA--GKPQPPQ-----NCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN-------LLVNLTNL----- 208 (261)
Q Consensus 148 ~~~v~~~--~~p~~p~-----~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~~~----- 208 (261)
.+.+.+. ..+.+|. ...+....|+.+.|.|.+ .+..+..+ .|+++..... ........
T Consensus 195 ~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~i-~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 271 (315)
T 1itb_B 195 VIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNV--TGQLSDIA-YWKWNGSVIDEDDPVLGEDYYSVENPANKR 271 (315)
T ss_dssp EEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEE--EECTTSEE-EEEETTEECCTTCSSEEEEEEEECCSSCGG
T ss_pred EEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEE--ecCCCCee-EEEECCEECCcccccccccceeeeccCCCc
Confidence 3333222 1122332 112445679999999997 33333334 4544322110 01111111
Q ss_pred ---CCCcEEEcCCCCCC-ccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 209 ---DTPAFTLEDLGLDG-TVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 209 ---~~~~~~i~~~~l~~-~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
....|.|.+++.+| +|.| +|.|.|..|....+..+.+.
T Consensus 272 ~~~~~~~L~i~~v~~~d~~G~Y--~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 272 RSTLITVLNISEIESRFYKHPF--TCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp GEEEEEEEEESSCCGGGGTSCE--EEEEECTTCCEEEEEEEECC
T ss_pred eeEEEEEEEEeecCHHHcCCce--EEEEecCCCceeEEEEEEec
Confidence 11379999999999 9999 99999999998887777664
No 28
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.93 E-value=2.7e-25 Score=176.40 Aligned_cols=227 Identities=13% Similarity=0.180 Sum_probs=152.2
Q ss_pred CCCeeccC----CCCceEEEECCeEEEccCCCCCC-EeEEEEEEeCCCccee---eeEEEEEEee-----ceeecCceeE
Q psy11549 2 AGGIPLAH----NTSARIILSNQSLVLQKVSRQSA-GTYKCSAINTKGEATS---NQLKLRVKYA-----PICKSDRIVI 68 (261)
Q Consensus 2 ~ng~~l~~----~~~~~~~~~~~~L~i~~~~~~D~-G~Y~C~~~~~~~~~~s---~~~~l~V~~~-----p~~~~~~~~~ 68 (261)
|||.++.. ...+.....+++|.|.+++.+|+ |.|+|.+.|..+.... ....|.|..+ |.........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~ 221 (388)
T 2v5m_A 142 TDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKP 221 (388)
T ss_dssp ETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCC
T ss_pred eCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCc
Confidence 56665532 13455666778999999999999 9999999998644311 1235666543 3222111122
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc---cCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD---VGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
..+..|+.+.|.|.+.+.|.+ .+.|++++.+.... ....++... ...|.|.++..+|+|.|+|.|.|..|....
T Consensus 222 ~~v~~G~~v~l~C~~~g~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 298 (388)
T 2v5m_A 222 LELMVAHTISLLCPAQGFPAP-SFRWYKFIEGTTRKQAVVLNDRVKQV--SGTLIIKDAVVEDSGKYLCVVNNSVGGESV 298 (388)
T ss_dssp EEEETTSCEEECCCCEEESCC-EEEEEEECTTSSCEEECCCSSSEEEE--TTEEEESSCCGGGCEEEEEEEECSSCEEEE
T ss_pred eEEeeCCcEEEEEECCCCCCC-EEEEEecCCCCcccccccccCceecc--cCEEEECcCCHHHCeEEEEEEecCCCceeE
Confidence 457789999999999998888 89999975432110 111122222 237999999999999999999999988766
Q ss_pred eEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCC
Q psy11549 146 PCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDG 222 (261)
Q Consensus 146 ~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 222 (261)
...+.|. .+|. .|.. .....|+.+.|.|.+ .+..+..+. |+++.... ......|.|.++...|
T Consensus 299 ~~~l~V~--~~p~~~~~~~~--~~v~~g~~~~l~C~~--~g~p~p~i~-W~~~g~~i-------~~~~~~L~i~~v~~~d 364 (388)
T 2v5m_A 299 ETVLTVT--APLSAKIDPPT--QTVDFGRPAVFTCQY--TGNPIKTVS-WMKDGKAI-------GHSESVLRIESVKKED 364 (388)
T ss_dssp EEEEEEE--EEEEEEEESSE--EEECTTSCEEEEEEE--EEECCCEEE-EEETTEEC-------SCCSSEEEESSCCGGG
T ss_pred EEEEEEe--CCCccccCCCc--EEecCCCCEEEEEEe--ccccCCeEE-EEECCEEC-------ccCCCEEEEecCChhh
Confidence 4444443 3332 2222 333569999999997 333334444 44433221 2235789999999999
Q ss_pred ccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 223 TVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 223 ~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.|.| +|.|.|..|....+..+.+
T Consensus 365 ~G~Y--~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 365 KGMY--QCFVRNDRESAEASAELKL 387 (388)
T ss_dssp CEEE--EEEEECSSCEEEEEEEEEE
T ss_pred CEEE--EEEEEcCCCcEEEEEEEEe
Confidence 9999 9999999998877766654
No 29
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.93 E-value=3.6e-25 Score=170.98 Aligned_cols=238 Identities=15% Similarity=0.081 Sum_probs=139.7
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCC----cceeeeEEEEEEee---ceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKG----EATSNQLKLRVKYA---PICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~----~~~s~~~~l~V~~~---p~~~~~~~~~~~~~~ 73 (261)
+|||.++... ......+++|.|.+++.+|+|.|+|.|.+..+ ...+..+.|.|... |.+...+.. .+..
T Consensus 57 ~k~g~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~--~v~~ 132 (316)
T 3vh8_G 57 YKEDRIHIPI--FHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGP--LVKS 132 (316)
T ss_dssp EESSCSSSCH--HHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCS--EEET
T ss_pred EeCCCcccee--ecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCC--ccCC
Confidence 4677776421 12223467899999999999999999986432 12355677887643 333322222 2679
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceE---EeeEEEE
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQ---VTPCLYQ 150 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~---~~~~~~~ 150 (261)
|++++|.|.+.+ +++ .+.|++++....................|.|.++..+|+|.|+|.|.|..+.. ..+..+.
T Consensus 133 G~~v~L~C~~~~-~~~-~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~ 210 (316)
T 3vh8_G 133 GERVILQCWSDI-MFE-HFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLD 210 (316)
T ss_dssp TCCEEEEEEESS-CCS-EEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEE
T ss_pred CCeEEEEEcCCC-CCc-EEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEE
Confidence 999999999954 334 79999987532211111111122345579999999999999999999987631 1122344
Q ss_pred EEeCCCCCCCCcceE---EeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEE--EecC--CCCcEEEcCCCCCCc
Q psy11549 151 VVLAGKPQPPQNCSV---RNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVN--LTNL--DTPAFTLEDLGLDGT 223 (261)
Q Consensus 151 v~~~~~p~~p~~~~v---~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~i~~~~l~~~ 223 (261)
+.+...+.+|..... ....|+.++|.|.+. ..+..|.| ++.......... .... ....|.|.+++ |+
T Consensus 211 l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~~---~~~~~~~W-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~ 284 (316)
T 3vh8_G 211 IVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSR---SSYDMYHL-SREGGAHERRLPAVRKVNRTFQADFPLGPAT--HG 284 (316)
T ss_dssp EEEECSSCCCEEEEESCSCCCTTSCCEEEEEES---SCCSEEEE-EETTSSCCEEEECEECTTSCEEEEEECC-------
T ss_pred EEecCCCCCCeEEeCCCCeecCCCcEEEEEECC---CCCcEEEE-EECCCcCCCceeceeccCCceeEEEEcCCcC--CC
Confidence 555444333321110 124699999999972 33344444 444433322111 1111 12578999966 99
Q ss_pred cEEEEEEEEEcCCC---cCCceeeeeeeeccc
Q psy11549 224 VLMRVVISGVNAKG---RSLPVIWDDFSMSGA 252 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G---~~~~s~~~~~~~~~~ 252 (261)
|.| +|.|.|..+ .+..|..+++...++
T Consensus 285 G~Y--~C~a~n~~~~~~~s~~S~~~~l~V~g~ 314 (316)
T 3vh8_G 285 GTY--RCFGSFRHSPYEWSDPSDPLLVSVTGN 314 (316)
T ss_dssp CEE--EEEEEBTTBTTEECCCCCCEEC-----
T ss_pred EEE--EEEeecCCCchhccCCCCcEEEEEeCC
Confidence 999 999999877 467788877766543
No 30
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.93 E-value=9.3e-25 Score=166.49 Aligned_cols=225 Identities=14% Similarity=0.142 Sum_probs=144.7
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcC
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNN 98 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~ 98 (261)
+.+|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|..+|...........+..|+.+.|.|.+.+.+.+..+.|++.+
T Consensus 50 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~ 128 (289)
T 3ejj_X 50 GSTLTTRNATFKNTGTYRCTELEDPMAG-STTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREG 128 (289)
T ss_dssp CCEEEESSCCGGGCEEEEEECCC------CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGG
T ss_pred ccEEEEeeeccccCEEEEEEEeccCCcc-eeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecC
Confidence 4689999999999999999999887775 677889998776532222233778899999999999987766459998754
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE-cCCceEEeeEEEEEEeCCCC-CCCCcc----eEEeecCCe
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ-NAIGTQVTPCLYQVVLAGKP-QPPQNC----SVRNETTSS 172 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~-~~~~~~~~~~~~~v~~~~~p-~~p~~~----~v~~~~~~~ 172 (261)
. ..+ ....++..... ..|.|.++..+|+|.|+|.+. +..+.... .+.+.+...+ .+|... ......|..
T Consensus 129 ~-~~~-~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~--~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~ 203 (289)
T 3ejj_X 129 G-RQV-LRKTVYFFSPW-RGFIIRKAKVLDSNTYVCKTMVNGRESTST--GIWLKVNRVHPEPPQIKLEPSKLVRIRGEA 203 (289)
T ss_dssp G-EEC-CTTCCEEEETT-TEEEESSCCGGGCEEEEEEEEETTEEEECC--CEEEEEESSCCCCCEEEEESSSEECCSSSC
T ss_pred C-eec-CCCccEEECCC-CCEEEeecccccCEEEEEEEEeCCCccccc--cEEEEEEECCCCCCeEEecCCceEEEeCCc
Confidence 2 222 22333333222 259999999999999999999 43343334 3444443322 222211 112246999
Q ss_pred EEEEeecCCCCCCCeEEEEEEEeCCccceeEEE--e---cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 173 VHISCTPGYDGGLPQTFTLELYSASDLNLLVNL--T---NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 173 ~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
+.|.|.+ .+..|.....|++........... . ......|.|.+++.+|.|.| +|.|.|.+|....+..+.+
T Consensus 204 ~~l~C~~--~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C~a~N~~G~~~~s~~L~~ 279 (289)
T 3ejj_X 204 AQIVCSA--TNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIY--SCVASNDVGTRTATMNFQV 279 (289)
T ss_dssp EEEEEEE--EESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEE--EEEEECSSCEEEEEEEEEC
T ss_pred EEEEEEe--CCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEE--EEEEEcCCCCccccEEEEE
Confidence 9999997 343454434444543322111100 0 01135799999999999999 9999999999999888887
Q ss_pred eecccc
Q psy11549 248 SMSGAH 253 (261)
Q Consensus 248 ~~~~~~ 253 (261)
..+.+.
T Consensus 280 ~~~~~~ 285 (289)
T 3ejj_X 280 VESHHH 285 (289)
T ss_dssp C-----
T ss_pred Eecccc
Confidence 655443
No 31
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.93 E-value=2.2e-25 Score=177.79 Aligned_cols=233 Identities=17% Similarity=0.221 Sum_probs=156.2
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCC-CEeEEEEEEeCCCcce--eeeEEEEEEee-------ceeecCc--eeEE
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQS-AGTYKCSAINTKGEAT--SNQLKLRVKYA-------PICKSDR--IVIV 69 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D-~G~Y~C~~~~~~~~~~--s~~~~l~V~~~-------p~~~~~~--~~~~ 69 (261)
||+..+.....+.....+++|.|.+++.+| +|.|+|.+.|..+... +..+.|.|... |.+..+. ....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~ 232 (404)
T 3p3y_A 153 SSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQ 232 (404)
T ss_dssp CTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEE
T ss_pred CCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCc
Confidence 555444434455666677899999999999 5999999999877642 23355666532 2222221 1235
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+..|+.+.|.|.+.+.|.+ .+.|++++.. +......+ ......|.|.++..+|+|.|+|.|.|..|.......
T Consensus 233 ~~~~G~~v~l~C~~~g~p~~-~v~W~~~~~~--~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~- 306 (404)
T 3p3y_A 233 MVLRGMDLLLECIASGVPTP-DIAWYKKGGD--LPSDKAKF--ENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTIS- 306 (404)
T ss_dssp EEETTSCEEEECCBCCSSCC-EEEEEETTBC--CCTTTEEE--EGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEE-
T ss_pred eEecCCCEEEEEEECCCCCC-cEEEEECCEE--CCCCcccc--cccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEE-
Confidence 68899999999999998888 8999998743 22222222 222347999999999999999999999888666444
Q ss_pred EEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcccee--EEEecCCCCcEEEcCCCCCCcc
Q psy11549 150 QVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLL--VNLTNLDTPAFTLEDLGLDGTV 224 (261)
Q Consensus 150 ~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~l~~~~ 224 (261)
+.+..+|. .|....+ ..|+.+.|.|.+ .+..+..+.| +++....... ..........|.|.++..+|+|
T Consensus 307 -l~V~~~p~~~~~~~~~~v--~~g~~~~l~C~~--~g~p~p~v~W-~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G 380 (404)
T 3p3y_A 307 -VRVKAAPYWLDEPKNLIL--APGEDGRLVCRA--NGNPKPTVQW-MVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRA 380 (404)
T ss_dssp -EEEEEEEEEEECCCCEEE--CTTCCEEEECEE--EEESCCEEEE-EETTEEGGGSCCCTTEEEETTEEEESSCCSSCCC
T ss_pred -EEEeCCCeeeccCCccee--ecCCcEEEEEEc--cccCCCceEE-EECCEecCCCCCCceEEecCCEEEEeecCHHHCE
Confidence 44444442 3333333 469999999997 3333344444 4443222100 0000112358999999999999
Q ss_pred EEEEEEEEEcCCCcCCceeeeeee
Q psy11549 225 LMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 225 ~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.| +|.|.|..|....+..+.+.
T Consensus 381 ~Y--~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 381 VY--QCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp EE--EEEEEETTEEEEEEEEEEEC
T ss_pred EE--EEEEEeCCCcEEEEEEEEEE
Confidence 99 99999999988877777653
No 32
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.93 E-value=8.4e-24 Score=158.89 Aligned_cols=214 Identities=13% Similarity=0.119 Sum_probs=141.5
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEE
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C 81 (261)
|||.++.. .+.+|.|.+++.+|+|.|+|.+.|..+. ..+.|.|..++....+.. ..+.+|+.+.|.|
T Consensus 38 ~~g~~~~~--------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s---~~~~l~v~~~~~~~~~~~--~~~~~g~~v~l~C 104 (262)
T 3rjd_A 38 LNGTATQT--------STPSYRITSASVNDSGEYRCQRGLSGRS---DPIQLEIHRGWLLLQVSS--RVFTEGEPLALRC 104 (262)
T ss_dssp ETTEECSC--------CSSEEEESSCCGGGCEEEEEEESSSCCC---CCEEEEEECSSEEEEESC--SEEETTSCEEEEE
T ss_pred ECCEEeec--------cCCeEEEecCCcccCeEEEEEEecCCcc---ccEEEEEeccceEecCCC--eEEecCCeEEEEE
Confidence 56666642 2568999999999999999999876543 357788876654433322 3467899999999
Q ss_pred EEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 82 AVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 82 ~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
.+....++..+.|++++.. +. .......|.|.++..+|.|.|+|.+.+..+.......+.+. .++.+|.
T Consensus 105 ~~~~~~p~~~v~W~~~g~~--~~-------~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~--~~~~~p~ 173 (262)
T 3rjd_A 105 HAWKDKLVYNVLYYRNGKA--FK-------FFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVK--ELFPAPV 173 (262)
T ss_dssp EEGGGCCCEEEEEEETTEE--EE-------EEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEE--CSSCCCE
T ss_pred EccCCCCCceEEEEECCcc--cc-------ccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEec--cCCCCCe
Confidence 9944444348999997642 11 11113469999999999999999999988666654444444 3222221
Q ss_pred -----cceEEeecCCeEEEEeecCCCCCC--C-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEE
Q psy11549 162 -----NCSVRNETTSSVHISCTPGYDGGL--P-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 162 -----~~~v~~~~~~~~~l~c~~~~~~~~--p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
...+ ..|+.+.|.|.+ .+.. | ..+.+.|...+... . .......|.|.+++.+|.|.| +|.|.
T Consensus 174 ~~~~~~~~~--~~g~~~~l~C~~--~~~p~~p~~~~~~~w~~~~~~~---~-~~~~~~~L~i~~v~~~d~G~Y--~C~a~ 243 (262)
T 3rjd_A 174 LNASVTSPL--LEGNLVTLSCET--KLLLQRPGLQLYFSFYMGSKTL---R-GRNTSSEYQILTARREDSGLY--WCEAA 243 (262)
T ss_dssp EEESSCSSE--ETTCCEEEEEEC--CCCCC-----EEEEEEETTEEE---E-EEESCCEEEESSCCGGGCEEE--EEEEE
T ss_pred EeecCceee--cCCCeEEEEeEc--ccCCCCCCccEEEEEEeCCcEe---c-ccCCCceEEEEEechhhCeEE--EEEEE
Confidence 2223 459999999997 3332 2 22333233322221 1 112447899999999999999 99999
Q ss_pred cCCCcC-Cceeeeeeee
Q psy11549 234 NAKGRS-LPVIWDDFSM 249 (261)
Q Consensus 234 N~~G~~-~~s~~~~~~~ 249 (261)
|..|.. ..|..+.+..
T Consensus 244 n~~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 244 TEDGNVLKRSPELELQV 260 (262)
T ss_dssp ETTSSCEEECCCEEECE
T ss_pred cccCceEEecCCeEEEE
Confidence 999964 5555555543
No 33
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.93 E-value=2.7e-25 Score=169.73 Aligned_cols=223 Identities=13% Similarity=0.124 Sum_probs=142.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
++|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|..+|...........+.+|+.+.|.|.+.+......+.|++++.
T Consensus 51 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~ 129 (292)
T 4dkd_C 51 SILSTNNATFQNTGTYRCTEPGDPLGG-SAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRG 129 (292)
T ss_dssp EEEEESSCCGGGCSCEEECCCC----C-CEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGG
T ss_pred EEEEEcccccccCEEEEEEEccCCCCc-ceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCC
Confidence 489999999999999999999987776 6778899987775422222236788999999999999833213799998742
Q ss_pred ccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCC-CCCC------cceEEeecCCe
Q psy11549 100 GETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKP-QPPQ------NCSVRNETTSS 172 (261)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p-~~p~------~~~v~~~~~~~ 172 (261)
..+ ....++..... ..|.|.++..+|+|.|+|.+.+..+..... .+.+.+...+ .+|. ...+ ..|+.
T Consensus 130 -~~~-~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~-~~~l~V~~~~~~~p~i~~~~~~~~~--~~g~~ 203 (292)
T 4dkd_C 130 -RPL-MRHTNYSFSPW-HGFTIHRAKFIQSQDYQCSALMGGRKVMSI-SIRLKVQKVIPGPPALTLVPAELVR--IRGEA 203 (292)
T ss_dssp -CCC-CSSCCEECCSS-SCCEETTCCGGGCSEEEEEECSTTSCEECC-CEEEEEECCCCSSCEEEEESSCBCC--CSSSC
T ss_pred -Ccc-ccCCcccccCC-ceEEECCCCHHHCeEEEEEEEeCCCceeEE-EEEEEEeCCCCCCCeEEccCCceeE--ecCCC
Confidence 222 22223333322 249999999999999999999876654331 3344443322 1221 1111 36999
Q ss_pred EEEEeecCCCCCCCeEEEEEEEeCCc-cce--eEEEecC---CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeee
Q psy11549 173 VHISCTPGYDGGLPQTFTLELYSASD-LNL--LVNLTNL---DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 173 ~~l~c~~~~~~~~p~~~~~~~~~~~~-~~~--~~~~~~~---~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~ 246 (261)
+.|.|.+ . +.|..+.|+|...+. ... ....... ....|.|.+++.+|.|.| +|.|.|..|....+..+.
T Consensus 204 v~l~C~~--~-~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C~a~N~~g~~~~~~~l~ 278 (292)
T 4dkd_C 204 AQIVCSA--S-SVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNY--SCVASNVQGKHSTSMFFR 278 (292)
T ss_dssp EEEEEEE--E-ESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEE--EEEEECSSCEEEEEEEEC
T ss_pred EEEEEEe--c-CCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEE--EEEEecCCCCceeEEEEE
Confidence 9999997 3 444444444433322 110 1111110 124799999999999999 999999999988888887
Q ss_pred eeeccccc
Q psy11549 247 FSMSGAHY 254 (261)
Q Consensus 247 ~~~~~~~~ 254 (261)
|.......
T Consensus 279 V~~~~~~~ 286 (292)
T 4dkd_C 279 VVESAGNS 286 (292)
T ss_dssp C-------
T ss_pred EeeCCCcc
Confidence 76554443
No 34
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.92 E-value=6.6e-23 Score=149.63 Aligned_cols=185 Identities=23% Similarity=0.309 Sum_probs=139.6
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC-ceE--EeCCceeEEEEecCCCCcCeEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS-ERF--SSGSRGSMLRYTPVTELDYGTLS 133 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~--~~~~~~~~l~i~~~~~~d~g~y~ 133 (261)
++|.+..+. . +.+..|+.+.|.|.+.+.|.+ .+.|++++.. +.... .++ ........|.|.++..+|+|.|+
T Consensus 18 ~~P~~~~p~-~-~~~~~G~~v~l~C~~~g~p~p-~i~W~~~g~~--l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (215)
T 3mtr_A 18 YAPKLQGPV-A-VYTWEGNQVNITCEVFAYPSA-TISWFRDGQL--LPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYN 92 (215)
T ss_dssp EEEEEECCS-E-EEECTTCCEEEEEEEEEESCC-EEEEEETTEE--SSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEE
T ss_pred cCCcccCCc-e-EEEECCCCEEEEEEEeecCCC-EEEEEECCeE--CCCCCCccEEEecCCCeeEEEEecCChhhCeEEE
Confidence 566664333 3 678899999999999999988 8999998743 22221 222 23344678999999999999999
Q ss_pred EEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecC-CCCCCCeE-EEEEEEeCCccceeEEE-e---c
Q psy11549 134 CAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPG-YDGGLPQT-FTLELYSASDLNLLVNL-T---N 207 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~-~~~~~p~~-~~~~~~~~~~~~~~~~~-~---~ 207 (261)
|.|.|..|.... .+.+.+..+|.+|..+.+. ..+..+.|.|.++ .+++.|+. |.+.|+..+........ . .
T Consensus 93 C~a~n~~g~~~~--~~~l~v~~~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~ 169 (215)
T 3mtr_A 93 CTAVNRIGQESL--EFILVQADTPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEA 169 (215)
T ss_dssp EEEECSSCEEEE--EEEEEECCCCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHH
T ss_pred EEEEECCCceEE--EEEEEECCCCCCCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccc
Confidence 999999998765 5667777889998877764 5688899999854 46677765 88888876654211111 1 1
Q ss_pred CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeecc
Q psy11549 208 LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 208 ~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~ 251 (261)
.....+.|.+ |.++..|.|+|.|.|.+|.+++|..+.+.+++
T Consensus 170 ~~~~~l~i~~--L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 170 SMEGIVTIVG--LKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp HHHTEEEEEC--CCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred cccccEEECC--CCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 1127899999 99999999999999999999999999887653
No 35
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.92 E-value=6e-25 Score=172.01 Aligned_cols=229 Identities=15% Similarity=0.141 Sum_probs=130.1
Q ss_pred CceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCc---eeEEEeeCCCcEEEEEEE-----
Q psy11549 12 SARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDR---IVIVGASRSESVDIHCAV----- 83 (261)
Q Consensus 12 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~---~~~~~~~~g~~~~l~C~~----- 83 (261)
..++...+++|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|..+|...... .....+..|+.+.|.|.+
T Consensus 71 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 149 (349)
T 4dep_C 71 ENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCS-KVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYF 149 (349)
T ss_dssp GGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEE-EEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSS
T ss_pred CceEeecCCEEEEccCChhhCEEEEEEEecCCceE-EEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccc
Confidence 34566778899999999999999999999988776 556888888765433222 122567899999999985
Q ss_pred eeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC-ceE-EeeEEEEEEeCCCCC---
Q psy11549 84 EADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI-GTQ-VTPCLYQVVLAGKPQ--- 158 (261)
Q Consensus 84 ~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~-~~~~~~~v~~~~~p~--- 158 (261)
.+.|.+ .+.|++++.. +.. ...+...+ ..|.|.++..+|+|.|+|.|.|.. |.. .....+.+.+..++.
T Consensus 150 ~g~p~~-~v~W~k~~~~--l~~-~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~ 223 (349)
T 4dep_C 150 PSSVKP-TITWYMGCYK--IQN-FNNVIPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAV 223 (349)
T ss_dssp CTTSCC-EEEEEETTEE--CCS-CSSEEEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCC
T ss_pred cCCCCc-eEEEeeCCEE--CCC-ccceeecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCC
Confidence 556666 8999998742 211 12333333 479999999999999999999976 443 123355565544321
Q ss_pred CCC-----c-ceEEeecCCeEEEEeecCC-CCCCCeEEEEEEEeCCccce---eEEE----ec---C---CCCcEEEcCC
Q psy11549 159 PPQ-----N-CSVRNETTSSVHISCTPGY-DGGLPQTFTLELYSASDLNL---LVNL----TN---L---DTPAFTLEDL 218 (261)
Q Consensus 159 ~p~-----~-~~v~~~~~~~~~l~c~~~~-~~~~p~~~~~~~~~~~~~~~---~~~~----~~---~---~~~~~~i~~~ 218 (261)
+|. . ..+....|+.+.|.|.+.. ..+.|...+.|+++...... .... .. . ....|.|.++
T Consensus 224 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 303 (349)
T 4dep_C 224 PPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKV 303 (349)
T ss_dssp SCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-----
T ss_pred CCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeec
Confidence 221 1 1113345899999999721 11344443444444322211 0000 00 0 0134889999
Q ss_pred CCCCc-cEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 219 GLDGT-VLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 219 ~l~~~-~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
..+|. |.| +|.|.|..|....+..+.+..
T Consensus 304 ~~~d~~G~Y--~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 304 TSEDLKRSY--VCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp --------C--EEEEECSSCEEEEECC-----
T ss_pred cHHHcCCcE--EEEEEcCCCcEEEEEEEeeec
Confidence 99999 999 999999999888887777754
No 36
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.92 E-value=4.6e-24 Score=169.30 Aligned_cols=242 Identities=14% Similarity=0.147 Sum_probs=159.4
Q ss_pred CC-CCeeccCCCCceEEEECCeEEEccCCCCC------CEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeC
Q psy11549 1 MA-GGIPLAHNTSARIILSNQSLVLQKVSRQS------AGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~-ng~~l~~~~~~~~~~~~~~L~i~~~~~~D------~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~ 73 (261)
+| ||.++......+....+++|.|.+++.+| +|.|+|.|.|..|...+..+.|.|..+|.+...... ..+.+
T Consensus 39 ~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~-~~v~~ 117 (388)
T 2v5m_A 39 IRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNK-EHVIR 117 (388)
T ss_dssp EETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCC-EEEET
T ss_pred EcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccc-eeeec
Confidence 35 88888755555566678899999999998 999999999998876567788888877766554444 67889
Q ss_pred CCcEEEEEEEeeCCC--CceeEEEEcCCcccccc--CCceEEeCCceeEEEEecCCCCcC-eEEEEEEEcCCceEEe-e-
Q psy11549 74 SESVDIHCAVEADPP--ARSFKWKFNNSGETLDV--GSERFSSGSRGSMLRYTPVTELDY-GTLSCAAQNAIGTQVT-P- 146 (261)
Q Consensus 74 g~~~~l~C~~~~~~~--~~~~~W~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~-g~y~C~~~~~~~~~~~-~- 146 (261)
|+.+.|.|.+.+.++ ...+.|++++....... ...++.... ...|.|.++..+|. |.|+|.+.+..+.... .
T Consensus 118 G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~ 196 (388)
T 2v5m_A 118 GNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLP-SGELHIREVGPEDGYKSYQCRTKHRLTGETRLSA 196 (388)
T ss_dssp TSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECT-TSCEEESSCCGGGGGCCEEEEEEETTTCCEEECS
T ss_pred CCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEEEcc-CCcEEEecCCccccCeeEEEEeccCCCCceeecc
Confidence 999999999988764 24899999875322111 122333222 23699999999999 9999999987543221 1
Q ss_pred --EEEEEEeCC---CCCCCCc--ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeC-CccceeE----EEecCCCCcEE
Q psy11549 147 --CLYQVVLAG---KPQPPQN--CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSA-SDLNLLV----NLTNLDTPAFT 214 (261)
Q Consensus 147 --~~~~v~~~~---~p~~p~~--~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~ 214 (261)
..+.+.... .|..|.. .......|+.+.|.|.+ .+..+..+. |++.. ....... .........|.
T Consensus 197 ~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~--~g~p~p~v~-W~~~~~~~~~~~~~~~~~~~~~~~~~L~ 273 (388)
T 2v5m_A 197 TKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA--QGFPAPSFR-WYKFIEGTTRKQAVVLNDRVKQVSGTLI 273 (388)
T ss_dssp SCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC--EEESCCEEE-EEEECTTSSCEEECCCSSSEEEETTEEE
T ss_pred ccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC--CCCCCCEEE-EEecCCCCcccccccccCceecccCEEE
Confidence 123333211 1111111 11223469999999997 333334444 44442 2111000 00011246899
Q ss_pred EcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 215 LEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 215 i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
|.+++..|.|.| +|.|.|..|....+..+.+..
T Consensus 274 i~~v~~~d~G~Y--~C~a~n~~g~~~~~~~l~V~~ 306 (388)
T 2v5m_A 274 IKDAVVEDSGKY--LCVVNNSVGGESVETVLTVTA 306 (388)
T ss_dssp ESSCCGGGCEEE--EEEEECSSCEEEEEEEEEEEE
T ss_pred ECcCCHHHCeEE--EEEEecCCCceeEEEEEEEeC
Confidence 999999999999 999999999876666666654
No 37
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.92 E-value=1.4e-24 Score=178.77 Aligned_cols=219 Identities=16% Similarity=0.185 Sum_probs=139.8
Q ss_pred EECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCce--eEEEeeCCCcEEEEEEEeeCCCCceeEE
Q psy11549 17 LSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRI--VIVGASRSESVDIHCAVEADPPARSFKW 94 (261)
Q Consensus 17 ~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~--~~~~~~~g~~~~l~C~~~~~~~~~~~~W 94 (261)
..+++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+...+. ....+..|+.+.|.|.+.+.|.|..+.|
T Consensus 270 ~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W 348 (524)
T 2ec8_A 270 ERQATLTISSARVNDSGVFMCYANNTFGSA-NVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQW 348 (524)
T ss_dssp EEEEEEEESSCCTTTCEEEEEEEECSSCEE-EEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEE
T ss_pred ceEEEEEECCCCHHHCEEEEEEEEecCCce-EEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEE
Confidence 345699999999999999999999999887 5588999998887654321 2377889999999999999998833999
Q ss_pred EEcCCccccccCCceEEeCC------ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEE-e
Q psy11549 95 KFNNSGETLDVGSERFSSGS------RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVR-N 167 (261)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~-~ 167 (261)
++++.. +.....++.... ....|.|.++..+|+|.|+|.|.|..|..... +.+.+..+|. ..... .
T Consensus 349 ~k~g~~--~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~--~~l~V~~~P~---i~~~~~~ 421 (524)
T 2ec8_A 349 IYMNRT--FTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIA--FNVYVNTKPE---ILTYDRL 421 (524)
T ss_dssp ESSSCB--CSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEE--EEEEECEEEE---EEEEECC
T ss_pred EECCee--ccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEE--EEEEEecCCe---EeecccC
Confidence 998743 222222333221 24689999999999999999999999986664 4455544443 11111 1
Q ss_pred ecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc----------eeE-EEecCCCCcEE----EcCCCCCCccEEEEEEEE
Q psy11549 168 ETTSSVHISCTPGYDGGLPQTFTLELYSASDLN----------LLV-NLTNLDTPAFT----LEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 168 ~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~----i~~~~l~~~~~Y~~~~~a 232 (261)
..| .|.|.+ . +.|..-+.|+++..... ... .........+. |.....+|.|.| +|.|
T Consensus 422 ~~g---~l~C~~--~-g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y--~C~a 493 (524)
T 2ec8_A 422 VNG---MLQCVA--A-GFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTV--ECKA 493 (524)
T ss_dssp SSS---CEEEEE--E-EESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-------CEE
T ss_pred cCc---EEEEEE--E-eecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEE--EEEE
Confidence 123 999997 3 44433334444422210 000 01111223333 333336899999 9999
Q ss_pred EcCCCcCCceeeeeeeecc
Q psy11549 233 VNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~~~ 251 (261)
.|.+|....+..+.|..+.
T Consensus 494 ~N~~G~~~~~~~l~V~e~~ 512 (524)
T 2ec8_A 494 YNDVGKTSAYFNFAFKGNN 512 (524)
T ss_dssp ECSSCEEECCCCCCC----
T ss_pred EcCCCceEEEEEEEEecCC
Confidence 9999998888888776443
No 38
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.92 E-value=3.2e-24 Score=171.02 Aligned_cols=240 Identities=16% Similarity=0.200 Sum_probs=156.2
Q ss_pred CCCCeeccCCC--CceEEEECCeEEEc----cCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCC
Q psy11549 1 MAGGIPLAHNT--SARIILSNQSLVLQ----KVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRS 74 (261)
Q Consensus 1 ~~ng~~l~~~~--~~~~~~~~~~L~i~----~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g 74 (261)
+|||+++.... .......+++|.|. +++.+|+|.|+|.|.|..|...+..+.|.|..+|...........+.+|
T Consensus 52 ~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G 131 (404)
T 3p3y_A 52 TRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEG 131 (404)
T ss_dssp EETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETT
T ss_pred EECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccC
Confidence 47888875332 22222345677775 8899999999999999988876677889998877654433333678899
Q ss_pred CcEEEEEEE-eeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCc-CeEEEEEEEcCCceEEe-eEEEEE
Q psy11549 75 ESVDIHCAV-EADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELD-YGTLSCAAQNAIGTQVT-PCLYQV 151 (261)
Q Consensus 75 ~~~~l~C~~-~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d-~g~y~C~~~~~~~~~~~-~~~~~v 151 (261)
+.+.|.|.+ .+.|.+ .+.|++++. ... ....++.... ...|.|.++...| .|.|+|.+.|..+.... ...+.+
T Consensus 132 ~~v~l~C~~~~~~p~~-~v~W~~~~~-~~~-~~~~~~~~~~-~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l 207 (404)
T 3p3y_A 132 APLTLQCNPPPGLPSP-VIFWMSSSM-EPI-TQDKRVSQGH-NGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTL 207 (404)
T ss_dssp SCEEECCCCCCCSSCC-EEEEECTTS-CBC-CCCSSEEECT-TSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCE
T ss_pred CcEEEEeCCCCCCCCC-eEEEeCCCc-ccc-CCCCcEEEcC-CCcEEEEeeeeccCCcceEEEEEeccccceeccCceeE
Confidence 999999999 566666 899998763 222 1222333322 2369999999999 59999999998765322 112233
Q ss_pred EeCCCC----CCCCc-------ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCC
Q psy11549 152 VLAGKP----QPPQN-------CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGL 220 (261)
Q Consensus 152 ~~~~~p----~~p~~-------~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 220 (261)
.+...+ .+|.. .......|+.+.|.|.+ .+ .|.....|++..................|.|.+++.
T Consensus 208 ~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~--~g-~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 284 (404)
T 3p3y_A 208 KVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIA--SG-VPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSE 284 (404)
T ss_dssp EEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCB--CC-SSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCG
T ss_pred EEeccCCccccCCccccccCCCCCceEecCCCEEEEEEE--CC-CCCCcEEEEECCEECCCCcccccccCceEEEccCCH
Confidence 332111 11111 12334569999999987 33 343333444443322111111222346899999999
Q ss_pred CCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 221 DGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 221 ~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
.|.|.| +|.|.|..|....+..+.+..
T Consensus 285 ~d~G~Y--~C~a~n~~g~~~~~~~l~V~~ 311 (404)
T 3p3y_A 285 EDSGEY--FCLASNKMGSIRHTISVRVKA 311 (404)
T ss_dssp GGCEEE--EEEEECSSCEEEEEEEEEEEE
T ss_pred hHCEEE--EEEEEeCCCcEEEEEEEEEeC
Confidence 999999 999999999876666666553
No 39
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.92 E-value=3.5e-24 Score=175.81 Aligned_cols=222 Identities=15% Similarity=0.159 Sum_probs=137.9
Q ss_pred CCCCeeccCCCCc--------eEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCc-eeEEEe
Q psy11549 1 MAGGIPLAHNTSA--------RIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDR-IVIVGA 71 (261)
Q Consensus 1 ~~ng~~l~~~~~~--------~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~-~~~~~~ 71 (261)
+|||++|...... ......++|.|.+++.+|+|.|+|.|.|. .+..+.|.|..+|.+.... .....+
T Consensus 263 ~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~----~~~~~~L~V~~~p~i~~~~~~~~~~v 338 (527)
T 3qs9_E 263 ELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH----PSQSALVTIVEKGFINATNSSEDYEI 338 (527)
T ss_dssp ECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE----EEEEEEEEEC--CEEECCCSCCEECC
T ss_pred EECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC----CCceEEEEEEccCccccccCcccEEE
Confidence 4778877532111 11233457999999999999999999887 3667889998888765332 223667
Q ss_pred eCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 72 SRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 72 ~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
..|+.+.|.|.+.+.|.| .+.|++++.. +.... .+.. ....|.|.++..+|+|.|+|.|.|..|.... .+.+
T Consensus 339 ~~G~~v~L~C~~~g~P~p-~i~W~k~g~~--l~~~~-~~~~--~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~--~~~L 410 (527)
T 3qs9_E 339 DQYEEFCFSVRFKAYPQI-RCTWTFSRKS--FPCEQ-KGLD--NGYSISKFCNHKHQPGEYIFHAENDDAQFTK--MFTL 410 (527)
T ss_dssp CTTCCCCEEEEEEEESCC-EEEEEETTEE--EECBC-CBCS--SSSEEEEECCCTTCCSCEEEEEEETTEEEEE--EEEE
T ss_pred cCCCeEEEEEEEEecCCC-EEEEEECCEE--CcCCc-cccc--CCcEEEEecCCcccCEEEEEEEEeCCCcEEE--EEEE
Confidence 899999999999999988 7999998742 22211 1111 2347999999999999999999999988776 4555
Q ss_pred EeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--------eeEE------EecC--CCCcEEE
Q psy11549 152 VLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--------LLVN------LTNL--DTPAFTL 215 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--------~~~~------~~~~--~~~~~~i 215 (261)
.|..+|. . ... .....|.|.+ .+.+++.+.|. +..+... ..+. .... ....+.|
T Consensus 411 ~V~~~P~---i-~~~---~~~~~l~C~a--~g~P~p~i~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i 480 (527)
T 3qs9_E 411 NIRRKPQ---V-LAE---ASASQASCFS--DGYPLPSWTWK-KCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNM 480 (527)
T ss_dssp C--CCCE---E-EEC---CCCE---EEE--ECSSCCEEEEE-CCC-----CCCCCCCCEEEC---------CEEEEECCC
T ss_pred EEecCCe---E-EEe---CCCCEEEEEE--EEEcCCeEEEE-ECCCCcCCCccccccccceeccccccCCceEEEEEEEE
Confidence 5555543 1 111 1234679997 33333444443 3221110 0010 0000 1123444
Q ss_pred cCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 216 EDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 216 ~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.. ..+.|.| +|.|.|.+|..+.+..+.+.
T Consensus 481 ~~--~~d~G~Y--~C~A~N~~G~~~~~~~L~V~ 509 (527)
T 3qs9_E 481 SE--AIKGFLV--KCCAYNSLGTSCETILLNSP 509 (527)
T ss_dssp CC--SSCSCEE--EEEEECSSCEEEEEEEC---
T ss_pred EE--cCCCEEE--EEEEEeCCCCceeEEEEecC
Confidence 45 7899999 99999999998877777543
No 40
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.92 E-value=3.2e-23 Score=165.91 Aligned_cols=210 Identities=14% Similarity=0.113 Sum_probs=129.0
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCc
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSG 100 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~ 100 (261)
+|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+..... .....|+.+.|.|.+.+.|.| .+.|++++..
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~~~~~~p--~~~~~~~~~~L~C~a~G~P~P-~i~W~k~~~~ 179 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATNY-TILFTVSIRNTLLYTLRRP--YFRKMENQDALVCISESVPEP-IVEWVLCDSQ 179 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEE-EEEEEEEEC-----CEEEE--EEEECSSSSCEEEEEEESSCC-EEEEEEC---
T ss_pred EEEEeecCcccCEEEEEEEEcCCCcE-EEEEEEEEecCccccccCC--cEeccCCceEEEEEEeeecCC-eEEEEECCCC
Confidence 69999999999999999999998876 6678888886665431111 234568889999999999988 8999997642
Q ss_pred cccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecC
Q psy11549 101 ETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPG 180 (261)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~ 180 (261)
..................+ ...|+|.|+|.|.|..|.... ..+.+.+..+|..+.. ......|+.+.|.|.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~l-----~~~d~G~Y~C~A~N~~G~~~~-~~~~l~V~~~p~~~~~-~~~v~~G~~v~L~C~~- 251 (423)
T 3qs7_E 180 GESCKEESPAVVKKEEKVL-----HELFGTDIRCCARNELGRECT-RLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKA- 251 (423)
T ss_dssp ----------CEEECCSEE-----CCCCSSCEEEEEECSSCEEEE-ECEEEESSSCCCSSTT-EEEEETTSCEEEEEEE-
T ss_pred CccccccccccccccceEE-----ecccCeEEEEEEEcCCCCcce-eeEEEEEecCCccCCC-ceEEeCCCeEEEEEEE-
Confidence 1100000000000000011 578999999999999887655 3566777666653322 3334569999999998
Q ss_pred CCCCCCeEEEEEEEeCCccce--eE---EEe----cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 181 YDGGLPQTFTLELYSASDLNL--LV---NLT----NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 181 ~~~~~p~~~~~~~~~~~~~~~--~~---~~~----~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.+..|...+.|++....... .. ... ......|.|.+++.+|+|.| +|.|.|. ...+..+.+.
T Consensus 252 -~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~A~N~---~~~~~~L~V~ 322 (423)
T 3qs7_E 252 -VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYY--TCSSSKH---PSQSALVTIV 322 (423)
T ss_dssp -EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEE--EEEETTE---EEEEEEEEEE
T ss_pred -EcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEE--EEEEecC---CCceEEEEEE
Confidence 44345332334454332211 11 111 01124699999999999999 9999999 3444444443
No 41
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.92 E-value=1.8e-22 Score=168.36 Aligned_cols=221 Identities=16% Similarity=0.148 Sum_probs=148.9
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcce----eeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCcee----
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEAT----SNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSF---- 92 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~----s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~---- 92 (261)
+|.|.+++.+|+|.|+|.|.|. |... ...+.|.|..+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+
T Consensus 291 ~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~G~~v~l~C~~~~~p~p-~i~~w~ 367 (585)
T 2ocw_A 291 SVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNEESTIPRSPTV-VKGVAGSSVAVLCPYNRKESK-SIKYWC 367 (585)
T ss_pred EEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEecccccccCCcc-eEEEeCCcEEEEEecCCCCCc-cEEEEE
Confidence 7999999999999999999995 4432 26788999988887665544 678899999999999988887 45
Q ss_pred EEEE--cCCccccc--------cCCceEEe----CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 93 KWKF--NNSGETLD--------VGSERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 93 ~W~~--~~~~~~~~--------~~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
.|++ ++....+. ....++.. ......|.|.++..+|+|.|+|.| |..|.......+.|.. .+|.
T Consensus 368 ~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~-~~p~ 445 (585)
T 2ocw_A 368 LWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIE-GEPN 445 (585)
T ss_pred EEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEec-Cccc
Confidence 7988 65310111 01122222 223345999999999999999999 8777666544444432 1232
Q ss_pred --CCCcceEEeecCCeEEEEeecCC-CCCCCeEEEEEEEeCCcccee--------EEEe--cCCCCcEEEcCCCCCCccE
Q psy11549 159 --PPQNCSVRNETTSSVHISCTPGY-DGGLPQTFTLELYSASDLNLL--------VNLT--NLDTPAFTLEDLGLDGTVL 225 (261)
Q Consensus 159 --~p~~~~v~~~~~~~~~l~c~~~~-~~~~p~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~i~~~~l~~~~~ 225 (261)
.|.... ...|+.+.|.|.+.. ..+.|...+.|+++....... +... ......|.|.++..+|+|.
T Consensus 446 ~~~~~~~~--v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 523 (585)
T 2ocw_A 446 LKVPGNVT--AVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGW 523 (585)
T ss_pred cccCCcee--EecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeE
Confidence 333333 356999999999732 225555555555553322100 1111 1122589999999999999
Q ss_pred EEEEEEEEcCCCcCCce-eeeeeeec
Q psy11549 226 MRVVISGVNAKGRSLPV-IWDDFSMS 250 (261)
Q Consensus 226 Y~~~~~a~N~~G~~~~s-~~~~~~~~ 250 (261)
| +|.|.|..|.++.. ..+.|..+
T Consensus 524 Y--~C~a~N~~G~~~~~~~~l~V~~~ 547 (585)
T 2ocw_A 524 Y--WCGVKQGHFYGETAAVYVAVEER 547 (585)
T ss_pred E--EEEeEeCCCccEEEEEEEEEEee
Confidence 9 99999999977754 55555544
No 42
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.92 E-value=2.8e-22 Score=167.23 Aligned_cols=205 Identities=14% Similarity=0.120 Sum_probs=139.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCc
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSG 100 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~ 100 (261)
+|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|..+|.+...... ..+..|+.+.|.|.+.+.+++..+.|++++..
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~ 153 (585)
T 2ocw_A 76 VVNIAQLSQDDSGRYKCGLGINSRGL-SFDVSLEVSQGPGLLNDTKV-YTVDLGRTVTINCPFKTENAQKRKSLYKQIGL 153 (585)
T ss_pred EEEECCCCcccCEEEEEEcccCCCCc-eEEEEEEEecCccccCCCcc-EEEEcCCCEEEEEEecCCCCCccEEEEECCCC
Confidence 69999999999999999999988776 67789999988887655544 77889999999999997766548999998642
Q ss_pred ccccc----------CCceEE--eCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceE
Q psy11549 101 ETLDV----------GSERFS--SGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSV 165 (261)
Q Consensus 101 ~~~~~----------~~~~~~--~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v 165 (261)
..... ...++. ..+ ....|.|.++..+|+|.|+|.+.|..+..... +.+.|..+| |..+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~--~~l~V~~~~--p~~~~~ 229 (585)
T 2ocw_A 154 YPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKN--ADLQVLKPE--PELVYE 229 (585)
T ss_pred CceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccce--EEEEEccCC--CceeEE
Confidence 11100 012222 222 22379999999999999999999988876654 444443332 333333
Q ss_pred EeecCCeEEEEeecCCCCCCC--eEEEEEEEeCCcc--------------ceeEEEec-CCCC--cEEEcCCCCCCccEE
Q psy11549 166 RNETTSSVHISCTPGYDGGLP--QTFTLELYSASDL--------------NLLVNLTN-LDTP--AFTLEDLGLDGTVLM 226 (261)
Q Consensus 166 ~~~~~~~~~l~c~~~~~~~~p--~~~~~~~~~~~~~--------------~~~~~~~~-~~~~--~~~i~~~~l~~~~~Y 226 (261)
..|+.+.|.|.. ....| ..+.|.+++.... ........ .... .|.|.+++..|.|.|
T Consensus 230 --~~G~~v~l~C~~--~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y 305 (585)
T 2ocw_A 230 --DLRGSVTFHCAL--GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRY 305 (585)
T ss_pred --cCCCcEEEEEEc--CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEE
Confidence 469999999996 22223 3344432333110 00111111 1123 699999999999999
Q ss_pred EEEEEEEcCCC
Q psy11549 227 RVVISGVNAKG 237 (261)
Q Consensus 227 ~~~~~a~N~~G 237 (261)
+|.|.|..+
T Consensus 306 --~C~a~n~g~ 314 (585)
T 2ocw_A 306 --LCGAHSDGQ 314 (585)
T ss_pred --EEEEEcCCC
Confidence 999999533
No 43
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.92 E-value=1.9e-23 Score=162.33 Aligned_cols=219 Identities=16% Similarity=0.208 Sum_probs=144.4
Q ss_pred CCeEEEccCCCCCCEeEEEEEE-eCCCcceeeeEEEEEEeeceeecC-ceeEEEeeCC---CcEEEEEE-EeeCCCCcee
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAI-NTKGEATSNQLKLRVKYAPICKSD-RIVIVGASRS---ESVDIHCA-VEADPPARSF 92 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~-~~~~~~~s~~~~l~V~~~p~~~~~-~~~~~~~~~g---~~~~l~C~-~~~~~~~~~~ 92 (261)
+++|.|.+++.+|+|.|+|.+. +..+.. +..+.|.|..+|.+... ....+.+..| +.+.|.|. +.+.|.+ .+
T Consensus 91 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~-~i 168 (331)
T 3u83_A 91 DGTIRLSRLELEDEGVYICEFATFPTGNR-ESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPS-VV 168 (331)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCC-EE
T ss_pred CceEEEcccCcccCcEEEEEEEecCCCcc-EEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCc-eE
Confidence 5689999999999999999854 445544 67789999888776321 1122567778 77999998 7777777 89
Q ss_pred EEEEcCCccccc----cCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC----CCCcce
Q psy11549 93 KWKFNNSGETLD----VGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ----PPQNCS 164 (261)
Q Consensus 93 ~W~~~~~~~~~~----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~----~p~~~~ 164 (261)
.|+++..+.... .....+.. .+.|.|.++..+|.|.|+|.|.|..+..... +.+.+..+|. ++....
T Consensus 169 ~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~--~~l~V~~~P~~~~~~~~~~~ 243 (331)
T 3u83_A 169 SWETRLKGEAEYQEIRNPNGTVTV---ISRYRLVPSREAHQQSLACIVNYHMDRFKES--LTLNVQYEPEVTIEGFDGNW 243 (331)
T ss_dssp EEEESSCCEEEEEEEECTTSCEEE---EEEEEECCCGGGTTCEEEEEEEETTEEEEEE--EECCEEEEEEEEEECCCSCC
T ss_pred EEEcCCCCccccceeECCCCcEEE---EEEEEEEeccccCCCEEEEEEecCCCcceee--EEEEEecCCeEEEecCCCce
Confidence 999864332210 01111111 2368888999999999999999998776654 3344433332 111111
Q ss_pred EEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEc-CCCCCCccEEEEEEEEEcCCCcCCcee
Q psy11549 165 VRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLE-DLGLDGTVLMRVVISGVNAKGRSLPVI 243 (261)
Q Consensus 165 v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~Y~~~~~a~N~~G~~~~s~ 243 (261)
...|+.+.|.|.+ .+..+.....|++........... ....|.|. ++..+|.|.| +|.|.|..|....+.
T Consensus 244 --~~~g~~~~l~C~~--~g~p~p~~i~W~~~~~~~~~~~~~---~~~~L~i~~~v~~~d~G~Y--~C~a~N~~G~~~~~~ 314 (331)
T 3u83_A 244 --YLQRMDVKLTCKA--DANPPATEYHWTTLNGSLPKGVEA---QNRTLFFKGPINYSLAGTY--ICEATNPIGTRSGQV 314 (331)
T ss_dssp --BTTCCCEEEEEEE--EEESCCCEEEEEETTBSCCTTEEE---ETTEEEECSCCCGGGCEEE--EEEEEETTEEEEEEE
T ss_pred --EeCCCeEEEEEeC--cCCCCCCEEEEEECCCccccccee---cCcEEEEeCCCccccCeEE--EEEEEeccccceEEE
Confidence 2458999999997 333333324555554433222211 23679999 8999999999 999999999887777
Q ss_pred eeeeeecccc
Q psy11549 244 WDDFSMSGAH 253 (261)
Q Consensus 244 ~~~~~~~~~~ 253 (261)
.+.|......
T Consensus 315 ~l~V~~~~~~ 324 (331)
T 3u83_A 315 EVNITEAAAL 324 (331)
T ss_dssp EECCBC----
T ss_pred EEEEeccchh
Confidence 7776654433
No 44
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.91 E-value=9.8e-22 Score=155.93 Aligned_cols=237 Identities=18% Similarity=0.151 Sum_probs=158.0
Q ss_pred CCCCeeccCCCC-ceEEEEC---CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCc
Q psy11549 1 MAGGIPLAHNTS-ARIILSN---QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 1 ~~ng~~l~~~~~-~~~~~~~---~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 76 (261)
+|||++|..... +.....+ .+|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...|... .........+..
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~-~~~~~l~v~~~P~~P--~~~~~~~~~~~~ 211 (389)
T 2jll_A 135 RRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTR-FQEYILALADVPSSP--YGVKIIELSQTT 211 (389)
T ss_dssp EETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEE-EEEEEEEECCCCCCC--EEEEEEEECSSC
T ss_pred EECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcE-EEEEEEEecCCCCCC--cceEEeeccCCE
Confidence 478888875432 3333333 379999999999999999999999986 556777776555321 111133345678
Q ss_pred EEEEEEEeeCC--CCc---eeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 77 VDIHCAVEADP--PAR---SFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 77 ~~l~C~~~~~~--~~~---~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
+.|.|...... .+. .+.|...+.. .. ...........+.|.++...+.|.|+|.|.|..|....+..+.+
T Consensus 212 ~~l~w~~p~~~~g~pi~~y~v~~~~~~~~-~~----~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~ 286 (389)
T 2jll_A 212 AKVSFNKPDSHGGVPIHHYQVDVKEVASE-IW----KIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIF 286 (389)
T ss_dssp EEEEEECCSCCTTSCEEEEEEEEEETTCS-CC----EEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEE
T ss_pred EEEEEeCCCCCCCcceEEEEEEEEECCCc-cc----EEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEE
Confidence 99999854322 121 3667665431 11 11222333457999999999999999999999886544323333
Q ss_pred E--eCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEE
Q psy11549 152 V--LAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMR 227 (261)
Q Consensus 152 ~--~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~ 227 (261)
. ...+|.+|. +.........+.|+|.++.+++.++ .|.++|+......... .........+.|.+ |.+++.|+
T Consensus 287 ~t~~~~~p~~p~-~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~~~t~Y~ 363 (389)
T 2jll_A 287 QTLPVREPSPPS-IHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEH--LQWTMGYE 363 (389)
T ss_dssp ECCCCCCCCCCC-EEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECS--CCTTCEEE
T ss_pred EecCCCCCCCCc-cccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCC--cCCCCEEE
Confidence 2 223666775 4455568999999999877777664 4999988754432111 22334557889999 99999999
Q ss_pred EEEEEEcCCCcCCceeeeeee
Q psy11549 228 VVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 228 ~~~~a~N~~G~~~~s~~~~~~ 248 (261)
|+|.|.|..|.|++|.+...+
T Consensus 364 ~~V~A~n~~G~s~~s~~~~~T 384 (389)
T 2jll_A 364 VQITAANRLGYSEPTVYEFSM 384 (389)
T ss_dssp EEEEEEC-CCBCCCEEEEEEC
T ss_pred EEEEEEcCCcCCCceeeEecC
Confidence 999999999999999884433
No 45
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.91 E-value=1.1e-22 Score=175.81 Aligned_cols=234 Identities=18% Similarity=0.221 Sum_probs=160.4
Q ss_pred CCCCeeccCCCCceEE---EEC----CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTSARII---LSN----QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~---~~~----~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~ 73 (261)
+|||.++..+...... ..+ .+|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+..... ..+..
T Consensus 464 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~--~~v~~ 540 (816)
T 3dmk_A 464 ELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVA-EHSAKLNVYGLPYIRQMEK--KAIVA 540 (816)
T ss_dssp EETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEE-EEEEEEEECSSCEECCCCC--EEEET
T ss_pred EECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeE-EEEEEEEEecCCeeEccCC--eEEec
Confidence 4688888644331111 112 269999999999999999999999886 6778999988886654332 56779
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCC-CCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVT-ELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
|+.+.|.|.+.+.|.+ .+.|++++.. +.... +..... ...|.|.++. .+|+|.|+|.|.|..|.... ..+.+.
T Consensus 541 G~~v~l~C~~~g~p~~-~i~W~k~~~~--l~~~~-~~~~~~-~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~-~~~~v~ 614 (816)
T 3dmk_A 541 GETLIVTCPVAGYPID-SIVWERDNRA--LPINR-KQKVFP-NGTLIIENVERNSDQATYTCVAKNQEGYSAR-GSLEVQ 614 (816)
T ss_dssp TCCEEEECCEECSSEE-EEEEEETTEE--SCCST-TEEECT-TSEEEESSCCHHHHCEEEEEEEEESSSCEEE-EEEEEE
T ss_pred CCeEEEEEEecCCCCC-EEEEEECCeE--cccCC-ceEEec-CCeEEEEecCccccCEEEEEEEEECCCceee-eeEEEE
Confidence 9999999999998877 8999998743 22222 222221 2269999998 68999999999999875433 244555
Q ss_pred eCCCCC----CCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccc----eeEEEecCCCCcEEEcCCCCCCc
Q psy11549 153 LAGKPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLN----LLVNLTNLDTPAFTLEDLGLDGT 223 (261)
Q Consensus 153 ~~~~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~l~~~ 223 (261)
+..+|. .+....+ ..|+.+.|.|.+ .++.+. .+.| +++..... ............|.|.++...|.
T Consensus 615 v~~~p~~~~~~~~~~~~--~~G~~v~L~C~~--~~~~~~~~i~W-~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 689 (816)
T 3dmk_A 615 VMVLPRIIPFAFEEGPA--QVGQYLTLHCSV--PGGDLPLNIDW-TLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHA 689 (816)
T ss_dssp EECCCCCBCCCCCSSCE--ESSCEEEEEEBC--CCSSSCCEEEE-EETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGC
T ss_pred EecCCcccccccccccc--CCCCeEEEEEEE--eCCCCCCEEEE-EECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhC
Confidence 444443 1222333 459999999997 444443 4444 44432211 11122223446799999999999
Q ss_pred cEEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 224 VLMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
|.| +|.|.|..|....+..+.+..+
T Consensus 690 G~Y--~C~a~N~~g~~~~~~~l~V~~~ 714 (816)
T 3dmk_A 690 GNF--TCHARNLAGHQQFTTPLNVYVP 714 (816)
T ss_dssp EEE--EEEEECSSCEEEEEEEECEEEE
T ss_pred EEE--EEEEEeCCccEEEEEEEEEEeC
Confidence 999 9999999998888877776644
No 46
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.91 E-value=1.1e-23 Score=167.54 Aligned_cols=240 Identities=18% Similarity=0.226 Sum_probs=152.7
Q ss_pred CCCCeeccCCCC-ceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTS-ARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
+|||++|..... ......+++|.|.+++.+|+|.|+|.|.|..|...+..+.|.|.+.+....... ...+.+|+.+.|
T Consensus 42 ~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~-~~~~~~G~~v~l 120 (395)
T 1bih_A 42 KKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTH-EKTPIEGRPFQL 120 (395)
T ss_dssp EESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEE-EECCBTTEEEEE
T ss_pred EECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCc-ceeeeeCCcEEE
Confidence 578998875443 233345679999999999999999999998887655567777765433222222 366789999999
Q ss_pred EEEE-eeCCCCceeEEEEcCCccccccC----CceEEeCCceeEEEEecCCCCcCe---EEEEEEEcCCceEEeeE-EEE
Q psy11549 80 HCAV-EADPPARSFKWKFNNSGETLDVG----SERFSSGSRGSMLRYTPVTELDYG---TLSCAAQNAIGTQVTPC-LYQ 150 (261)
Q Consensus 80 ~C~~-~~~~~~~~~~W~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g---~y~C~~~~~~~~~~~~~-~~~ 150 (261)
.|.+ .+.|.+ .+.|++++........ ..++..... ..|.|.++..+|.| .|+|.+.|..+...... ...
T Consensus 121 ~C~~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~ 198 (395)
T 1bih_A 121 DCVLPNAYPKP-LITWKKRLSGADPNADVTDFDRRITAGPD-GNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYE 198 (395)
T ss_dssp CCCCCEEESCC-EEEEEEEETTSCGGGCCCCCCTTEEECTT-SCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEE
T ss_pred EecCCCCCCCC-eEEEEecCCCcCcccccccccccEEEcCC-CcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEE
Confidence 9996 677777 8999997622111111 223333222 26999999999999 99999999887643321 112
Q ss_pred EEeCCCCC-------CCC--cceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc----eeEEEe-cCCCCcEEEc
Q psy11549 151 VVLAGKPQ-------PPQ--NCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN----LLVNLT-NLDTPAFTLE 216 (261)
Q Consensus 151 v~~~~~p~-------~p~--~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~ 216 (261)
+.+..++. +|. ...+....|+.+.|.|.+ . +.|.....|++...... ...... ......|.|.
T Consensus 199 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~l~C~~--~-g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~ 275 (395)
T 1bih_A 199 IKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMY--G-SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFK 275 (395)
T ss_dssp ECCCBCCSSCCCCCCEEEEECCSEEEETTSCEEEEEEE--E-CSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEES
T ss_pred ecccccccccccCCcCceecCCceEEECCCcEEEEEEe--c-cCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEc
Confidence 22222211 110 012233569999999997 3 34433344444432211 011111 1222479999
Q ss_pred CCCCCCccEEEEEEEEEcCCCcCCc-eeeeeee
Q psy11549 217 DLGLDGTVLMRVVISGVNAKGRSLP-VIWDDFS 248 (261)
Q Consensus 217 ~~~l~~~~~Y~~~~~a~N~~G~~~~-s~~~~~~ 248 (261)
+++..|.|.| +|.|.|..|.... +..+.+.
T Consensus 276 ~~~~~d~G~Y--~C~a~n~~g~~~~~~~~l~V~ 306 (395)
T 1bih_A 276 TTLPEDEGVY--TCEVDNGVGKPQKHSLKLTVV 306 (395)
T ss_dssp SCCGGGCEEE--EEEECCSSSSCEEEEEEEEEE
T ss_pred cCChhhCEEE--EEEEEeCCCCceEEEEEEEEE
Confidence 9999999999 9999999997654 5555554
No 47
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.91 E-value=8e-24 Score=161.38 Aligned_cols=218 Identities=11% Similarity=0.088 Sum_probs=129.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcce--eeeEEEEEEeeceeecCce---eEEEeeCCCcEEEEEEEeeCCCCceeEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEAT--SNQLKLRVKYAPICKSDRI---VIVGASRSESVDIHCAVEADPPARSFKW 94 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~--s~~~~l~V~~~p~~~~~~~---~~~~~~~g~~~~l~C~~~~~~~~~~~~W 94 (261)
++|.|.+++.+|+|.|+|.|.|..|... +..+.|.|..+........ ..+.+.+|+.+.|.|.+. .|.+ .+.|
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~-~v~w 128 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQL-VVTL 128 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTS-CEEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCc-eEEE
Confidence 4899999999999999999999887632 3344444443222221111 115678999999999998 5555 7999
Q ss_pred EEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCC--CCC---CCCcceEEeec
Q psy11549 95 KFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAG--KPQ---PPQNCSVRNET 169 (261)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~--~p~---~p~~~~v~~~~ 169 (261)
++.+++..+. ..+.... .+. ...|+|.|+|.|.+..+..... .+.+.+.. +|. .|.... ...
T Consensus 129 ~~~~~~~~~~---~~~~~~~---~~~----~~~d~G~Y~C~a~n~~~~~~s~-~~~l~v~~~~~p~i~~~~~~~~--v~~ 195 (289)
T 3mjg_X 129 HEKKGDVALP---VPYDHQR---GFS----GIFEDRSYICKTTIGDREVDSD-AYYVYRLQVSSINVSVNAVQTV--VRQ 195 (289)
T ss_dssp EESSCCSCCC---CCEETTT---EEE----ECCCSSEEEEEEEETTEEEECC-CEEEEECCCCCCCCEEEESCSE--EET
T ss_pred EeCCCCCccc---eeecCCc---Cee----eeccCcEEEEEEEeCCceeeee-eEEEEecCCCCCCcEEeCCcce--eEc
Confidence 8875433321 1111111 121 2568999999999876655442 23444433 222 112222 346
Q ss_pred CCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeE-EEe----cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCce
Q psy11549 170 TSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLV-NLT----NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 170 ~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~~----~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
|+.+.|.|.+ .+..++.+.|.+....... ... ... ......|.|.++..+|.|.| +|.|.|.+|....+
T Consensus 196 G~~v~L~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~N~~G~~~~~ 271 (289)
T 3mjg_X 196 GENITLMCIV--IGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTY--TCNVTESVNDHQDE 271 (289)
T ss_dssp TSCEEEEEEE--ESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEE--EEEEEETTTTEEEE
T ss_pred CCCEEEEEEE--CCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEE--EEEeecCCCCceeE
Confidence 9999999997 3333344444422211111 011 111 11236899999999999999 99999999999999
Q ss_pred eeeeeeecccccCC
Q psy11549 243 IWDDFSMSGAHYAD 256 (261)
Q Consensus 243 ~~~~~~~~~~~~~~ 256 (261)
..+.+.......+.
T Consensus 272 ~~l~v~~~~~~~~~ 285 (289)
T 3mjg_X 272 KAINITVVESGHHH 285 (289)
T ss_dssp EEEEEEEEC-----
T ss_pred EEEEEEEEecCccc
Confidence 88888766555443
No 48
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.91 E-value=9.7e-24 Score=173.20 Aligned_cols=210 Identities=11% Similarity=0.049 Sum_probs=139.1
Q ss_pred ccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEe-eCCCCceeEEEEcCCcccc
Q psy11549 25 QKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVE-ADPPARSFKWKFNNSGETL 103 (261)
Q Consensus 25 ~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~W~~~~~~~~~ 103 (261)
..+..+|+|.|+|.|.|..|...+..+.|.|..+|.. ++. ...+..|+.+.|.|.+. +.|.+ .+.|++++.....
T Consensus 196 ~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~-~~~v~~G~~v~L~C~~~~g~p~p-~i~W~k~g~~l~~ 271 (527)
T 3qs9_E 196 KVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLP-QLFLKVGEPLWIRCKAVHVNHGF-GLTWELENKALEE 271 (527)
T ss_dssp SEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCC-EEEECTTSCEEEEEEEEESSSCC-CEEEECSSSCCCG
T ss_pred eeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCC-ceEEeCCCeEEEEEEEccCCCCe-EEEEEECCEECCC
Confidence 3456899999999999999987565688888877765 223 36788999999999997 66666 8999998753211
Q ss_pred ccCC--ceEEe---CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC---CCCcceEEeecCCeEEE
Q psy11549 104 DVGS--ERFSS---GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHI 175 (261)
Q Consensus 104 ~~~~--~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l 175 (261)
.... ..+.. ......|.|.++..+|+|.|+|.|.|. ... .+.+.|..+|. .|....+....|+.+.|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~--~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L 346 (527)
T 3qs9_E 272 GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQ--SALVTIVEKGFINATNSSEDYEIDQYEEFCF 346 (527)
T ss_dssp GGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEE--EEEEEEC--CEEECCCSCCEECCCTTCCCCE
T ss_pred CceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCc--eEEEEEEccCccccccCcccEEEcCCCeEEE
Confidence 1000 00110 112346999999999999999999987 333 45555555552 22222344456999999
Q ss_pred EeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 176 SCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 176 ~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
.|.+ . +.|..-+.|+++......... .......+.|.+++..|+|.| +|.|.|..|....+..+.+..
T Consensus 347 ~C~~--~-g~P~p~i~W~k~g~~l~~~~~-~~~~~~~L~I~~v~~~D~G~Y--tC~A~N~~g~~~~~~~L~V~~ 414 (527)
T 3qs9_E 347 SVRF--K-AYPQIRCTWTFSRKSFPCEQK-GLDNGYSISKFCNHKHQPGEY--IFHAENDDAQFTKMFTLNIRR 414 (527)
T ss_dssp EEEE--E-EESCCEEEEEETTEEEECBCC-BCSSSSEEEEECCCTTCCSCE--EEEEEETTEEEEEEEEEC--C
T ss_pred EEEE--E-ecCCCEEEEEECCEECcCCcc-cccCCcEEEEecCCcccCEEE--EEEEEeCCCcEEEEEEEEEec
Confidence 9997 3 344333444454322211111 112346789999999999999 999999999877776666653
No 49
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.91 E-value=3.8e-23 Score=164.34 Aligned_cols=221 Identities=15% Similarity=0.209 Sum_probs=145.6
Q ss_pred CceEEEECCeEEEccCCCCCCE---eEEEEEEeCCCcceeeeE--EEEEEe----------eceeecCceeEEEeeCCCc
Q psy11549 12 SARIILSNQSLVLQKVSRQSAG---TYKCSAINTKGEATSNQL--KLRVKY----------APICKSDRIVIVGASRSES 76 (261)
Q Consensus 12 ~~~~~~~~~~L~i~~~~~~D~G---~Y~C~~~~~~~~~~s~~~--~l~V~~----------~p~~~~~~~~~~~~~~g~~ 76 (261)
.+.....+++|.|.+++.+|+| .|+|.+.|..+....... .+.+.. .|.+. .. ...+..|+.
T Consensus 153 ~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~-~~~~~~G~~ 229 (395)
T 1bih_A 153 RRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYV--SK-DMMAKAGDV 229 (395)
T ss_dssp TTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEE--CC-SEEEETTSC
T ss_pred ccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceec--CC-ceEEECCCc
Confidence 4455566789999999999999 999999999887522211 111111 22221 11 256789999
Q ss_pred EEEEEEEeeCCCCceeEEEEcCCccccccCCceEEe--CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeC
Q psy11549 77 VDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSS--GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLA 154 (261)
Q Consensus 77 ~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 154 (261)
+.|.|.+.+.|.+ .+.|++++.... .....++.. ......|.|.++..+|+|.|+|.|.|..|..... .+.+.+.
T Consensus 230 v~l~C~~~g~p~~-~i~W~~~g~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~~l~V~ 306 (395)
T 1bih_A 230 TMIYCMYGSNPMG-YPNYFKNGKDVN-GNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKH-SLKLTVV 306 (395)
T ss_dssp EEEEEEEECSSCC-CCEEEETTEECC-CCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEE-EEEEEEE
T ss_pred EEEEEEeccCCCC-eEEEEECCEEcC-CCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEE-EEEEEEE
Confidence 9999999998888 799999874221 111222222 1223379999999999999999999988875431 3334443
Q ss_pred CCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc-eeEEEecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 155 GKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN-LLVNLTNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 155 ~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
.+|. .|.. .+....|+.+.|.|.+ . +.|.....|+++..... ...... ...|.|.++..+|.|.| +|
T Consensus 307 ~~P~~~~~~~~-~~~~~~g~~~~l~C~~--~-g~p~p~v~W~~~g~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y--~C 377 (395)
T 1bih_A 307 SAPKYEQKPEK-VIVVKQGQDVTIPCKV--T-GLPAPNVVWSHNAKPLSGGRATVT---DSGLVIKGVKNGDKGYY--GC 377 (395)
T ss_dssp EEEEEEECCCS-EEEECTTSCEEEECEE--E-EESCCCCEEEETTEECCSSSEEEE---TTEEEESSCCSTTCEEE--EE
T ss_pred cCCccccCCCc-ceEecCCCeEEEEEEE--C-cccCCeeEEEECCEECCCCceEEE---CCEEEEeeCCcccCEEE--EE
Confidence 4443 2322 2344569999999997 3 33433234444432221 112222 24899999999999999 99
Q ss_pred EEEcCCCcCCceeeeee
Q psy11549 231 SGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~~ 247 (261)
.|.|..|....+..+.|
T Consensus 378 ~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 378 RATNEHGDKYFETLVQV 394 (395)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEccCCCceEEEEEEE
Confidence 99999998877766654
No 50
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.91 E-value=3.5e-23 Score=165.67 Aligned_cols=209 Identities=11% Similarity=0.057 Sum_probs=130.5
Q ss_pred CCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEEEEcCCccccccC
Q psy11549 28 SRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKWKFNNSGETLDVG 106 (261)
Q Consensus 28 ~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~~~ 106 (261)
+..|+|.|+|.|.|..|...+..+.|.|..+|... ... ..+.+|+.+.|.|.+.+. |.+ .+.|++++..... ..
T Consensus 199 ~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~--~~~-~~v~~G~~v~L~C~~~g~~p~p-~i~W~k~g~~l~~-~~ 273 (423)
T 3qs7_E 199 HELFGTDIRCCARNELGRECTRLFTIDLNQTPQTT--LPQ-LFLKVGEPLWIRCKAVHVNHGF-GLTWELENKALEE-GN 273 (423)
T ss_dssp CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSS--TTE-EEEETTSCEEEEEEEEESSSCC-CEEEEESSSBCCG-GG
T ss_pred ecccCeEEEEEEEcCCCCcceeeEEEEEecCCccC--CCc-eEEeCCCeEEEEEEEEcCCCCc-EEEEEECCEEccc-cc
Confidence 67999999999999999875555778887666542 223 668899999999999994 445 8999998753211 00
Q ss_pred Cc---eEEe---CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEe
Q psy11549 107 SE---RFSS---GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISC 177 (261)
Q Consensus 107 ~~---~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c 177 (261)
.. .+.. ......|.|.++..+|+|.|+|.|.|. ... .+.+.|..+|. .|....+....|+.+.|.|
T Consensus 274 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~--~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C 348 (423)
T 3qs7_E 274 YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQ--SALVTIVEKGFINATNSSEDYEIDQYEEFCFSV 348 (423)
T ss_dssp EEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEE--EEEEEEESSCEEEEC---CEECCCTTCCCCEEE
T ss_pred eeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCc--eEEEEEEeCCcceEcCCCccEEecCCCeEEEEE
Confidence 00 0000 111236999999999999999999987 333 44445545443 2222234445689999999
Q ss_pred ecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEE--cCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccccc
Q psy11549 178 TPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTL--EDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 178 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
.+ .+.|..-+.|+++....... .......+.+ ......|+|.| +|.|.|.+|....+..+.+....+.+
T Consensus 349 ~~---~g~P~p~i~W~k~g~~l~~~---~~~~~~~~~~~~~~~~~~D~G~Y--tC~A~N~~G~~~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 349 RF---KAYPQIRCTWTFSRKSFPCE---QKGLDNGYSISKFCNHKHQPGEY--IFHAENDDAQFTKMFTLNIRSGTKHH 419 (423)
T ss_dssp EE---EEESCCEEEEEETTEEEECB---CCBCSSSSEEEEECCCTTCCSCE--EEEEEETTEEEEEEEEEC--------
T ss_pred EE---EEcCCCeEEEEECCEECCCc---cccccCCcEEEEEecccccCEEE--EEEEEcCCceEEEEEEEEEecCCccc
Confidence 97 34443333444443222100 0000112333 45557899999 99999999998888888776554443
No 51
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.90 E-value=1.5e-23 Score=162.66 Aligned_cols=215 Identities=13% Similarity=0.120 Sum_probs=125.5
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcc----eeeeEEEEEEeeceeecC-ceeEEEeeCCCcEEEEEEEeeCCCC-cee
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEA----TSNQLKLRVKYAPICKSD-RIVIVGASRSESVDIHCAVEADPPA-RSF 92 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~----~s~~~~l~V~~~p~~~~~-~~~~~~~~~g~~~~l~C~~~~~~~~-~~~ 92 (261)
+.+|.|.+++.+|+|.|+|.+.|..+.. .+..+.|.|..+|..... ... ..+..|+.+.|.|.+.+.|++ ..+
T Consensus 73 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~-~~~~~g~~~~l~C~~~g~p~~~~~v 151 (327)
T 2wng_A 73 DFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPA-ARATPQHTVSFTCESHGFSPRDITL 151 (327)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCS-SCBCTTCEEEEEEEEEEEBSSCCEE
T ss_pred eeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccc-cccCCCCEEEEEEEEeCccCCCcEE
Confidence 4589999999999999999999986642 124567888765532110 111 346789999999999988765 389
Q ss_pred EEEEcCCccccccCCceEEeCC------ceeEEEEecCCCCcCeEEEEEEEcCCceE---EeeEEEEEEeCCCCCCCCcc
Q psy11549 93 KWKFNNSGETLDVGSERFSSGS------RGSMLRYTPVTELDYGTLSCAAQNAIGTQ---VTPCLYQVVLAGKPQPPQNC 163 (261)
Q Consensus 93 ~W~~~~~~~~~~~~~~~~~~~~------~~~~l~i~~~~~~d~g~y~C~~~~~~~~~---~~~~~~~v~~~~~p~~p~~~ 163 (261)
.|++++.. +......+.... ..+.|.|.....+|.|.|+|.|.|..+.. .....+.+.+..+|. +
T Consensus 152 ~W~k~g~~--l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~----i 225 (327)
T 2wng_A 152 KWFKNGNE--LSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPT----L 225 (327)
T ss_dssp EEEETTEE--CCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCE----E
T ss_pred EEEECCEE--ccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCE----E
Confidence 99998742 221111111111 12357777777778899999999987652 222122222233332 1
Q ss_pred eEE---eecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE--EEecCCC------CcEEEcCCCCCCccEEEEEEE
Q psy11549 164 SVR---NETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV--NLTNLDT------PAFTLEDLGLDGTVLMRVVIS 231 (261)
Q Consensus 164 ~v~---~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~--~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~ 231 (261)
.+. ...|+.+.|.|.+ .+..|.. .+.|+++........ ....... ..+.|..+..+|+|.| +|.
T Consensus 226 ~~~~~~~~~G~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y--~C~ 301 (327)
T 2wng_A 226 EVTQQPVRAENQVNVTCQV--RKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKL--TCQ 301 (327)
T ss_dssp EEEEECCSSTTCCEEEEEE--EEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEE--EEE
T ss_pred EEecCCcCCCCcEEEEEEE--ccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEE--EEE
Confidence 111 2369999999997 4434432 334444433221110 1111111 2366777777899999 999
Q ss_pred EEcCCCcCCceee
Q psy11549 232 GVNAKGRSLPVIW 244 (261)
Q Consensus 232 a~N~~G~~~~s~~ 244 (261)
|.|..|......+
T Consensus 302 a~N~~~~~~s~~~ 314 (327)
T 2wng_A 302 VEHDGQPAVSKSH 314 (327)
T ss_dssp EEETTCCCEEEEE
T ss_pred EEeCCCCCchhhe
Confidence 9999986543333
No 52
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=5.5e-23 Score=166.26 Aligned_cols=215 Identities=15% Similarity=0.143 Sum_probs=138.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCc--eeEEEEcC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPAR--SFKWKFNN 98 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~--~~~W~~~~ 98 (261)
+|.|.+++. |+| |+|.|.+..+.. +..+.|.|..+|...........+.+|+.+.|.|.+.+.+++. .+.|++++
T Consensus 51 ~l~i~~v~~-d~g-Y~C~a~~~~~~~-~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g 127 (450)
T 1z7z_I 51 VYELSNVQE-DSQ-PMCYSNCPDGQS-TAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (450)
T ss_dssp EEEEEEECS-CBC-CEEEEEETTEEE-EEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETT
T ss_pred EEEEEeccc-CCe-eEEEEeCCCCcc-eeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCC
Confidence 799999987 999 999997654444 6678899988777653222224577999999999999988764 68999987
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEE------eeEEEEEEeCCC-CCCCCc---ceEEee
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV------TPCLYQVVLAGK-PQPPQN---CSVRNE 168 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~------~~~~~~v~~~~~-p~~p~~---~~v~~~ 168 (261)
.. +... ..........|.|.++..+|+|.|+|.|.|..|... .+....+.+... +.+|.. ..+ .
T Consensus 128 ~~--l~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v--~ 201 (450)
T 1z7z_I 128 KE--LKRE--PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVL--E 201 (450)
T ss_dssp EE--EEEE--ECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEE--E
T ss_pred EE--eecc--cccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeE--E
Confidence 42 2111 111133345899999999999999999999865321 111223333333 334443 333 4
Q ss_pred cCCeEEEEeecCCCCCCC--eEEEEEEEeCCccceeEEEecCCCCcEEEc---CCCCCCccEEEEEEEEEcCCCcCCcee
Q psy11549 169 TTSSVHISCTPGYDGGLP--QTFTLELYSASDLNLLVNLTNLDTPAFTLE---DLGLDGTVLMRVVISGVNAKGRSLPVI 243 (261)
Q Consensus 169 ~~~~~~l~c~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~l~~~~~Y~~~~~a~N~~G~~~~s~ 243 (261)
.|+.+.|.|.+ .+..| ..-..|++............. ..+.+. +++..|.|.|.|+|.|.|..|....+.
T Consensus 202 ~G~~v~l~C~~--~g~~P~~~~~~~W~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~ 276 (450)
T 1z7z_I 202 VDTQGTVVCSL--DGLFPVSEAQVHLALGDQRLNPTVTYGN---DSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ 276 (450)
T ss_dssp TTSEEEEEEEE--ESCTTGGGCEEEEEETTEECCCEEEEET---TEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred eCCcEEEEEEe--eCCCCCCceEEEEeCCCEeCCceEEecC---CceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEE
Confidence 69999999997 44434 233333343322211221111 122222 556889996666999999999887777
Q ss_pred eeeeee
Q psy11549 244 WDDFSM 249 (261)
Q Consensus 244 ~~~~~~ 249 (261)
.+.+..
T Consensus 277 ~l~V~~ 282 (450)
T 1z7z_I 277 TVTIYS 282 (450)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 776654
No 53
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.90 E-value=4e-22 Score=156.85 Aligned_cols=202 Identities=12% Similarity=0.056 Sum_probs=138.0
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcC
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNN 98 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~ 98 (261)
+.+|.|.+++.+|+|.|+|.+.|.. ..+.|.|...+ ..+. ..+.+|+.+.|.|.+.+.|.+ .+.|++++
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~n~~-----~~~~l~V~~~~--~~~~---~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~ 134 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDTYICEVEDQK-----EEVQLLVFGLT--ANSD---THLLQGQSLTLTLESPPGSSP-SVQCRSPR 134 (363)
T ss_dssp CCCEEECSCCGGGCEEEEEEETTEE-----EEEEEEEEEEE--ESSC---SSEESBSCEEEEEECCTTCCC-CEEEECSS
T ss_pred eEEEEECCCCHHHCEEEEEEEEECC-----CcEEEEEEeCC--CCCc---eEEecCCCEEEEEEcCCCCCC-eEEEEcCC
Confidence 4579999999999999999998763 35677776532 1111 246799999999999887777 89999876
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEee
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCT 178 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~ 178 (261)
... . .....|.|.++..+|+|.|+|.+.+..+.... .+.+.+..+|..|.. +....|+.+.|.|.
T Consensus 135 ~~~---------~--~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~--~~~l~v~~~p~~~~~--~~~~~G~~v~l~C~ 199 (363)
T 1wio_A 135 GKN---------I--QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEF--KIDIVVLAFQKASSI--VYKKEGEQVEFSFP 199 (363)
T ss_dssp SCE---------E--EESSEEEECSBCGGGCEECEEEEEETTEEEEE--CCEECEECCSCSEEE--EEEETBCCEEEECC
T ss_pred Ccc---------c--ccceEEEEeeCChhcCCEEEEEEecCCCeEEE--EEEEEEecCCCCCCc--eEEecCCEEEEEEE
Confidence 421 1 12347999999999999999999987655544 344555556655533 33356999999998
Q ss_pred cCC-CCC-CCeEEEEEEEeCCccce----------eEEEe-----------cCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 179 PGY-DGG-LPQTFTLELYSASDLNL----------LVNLT-----------NLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 179 ~~~-~~~-~p~~~~~~~~~~~~~~~----------~~~~~-----------~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
+.. ..+ .|...+.|++....... ..... ......|.|.++...|+|.| +|.|.|.
T Consensus 200 ~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y--~C~a~n~ 277 (363)
T 1wio_A 200 LAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSG--NLTLALE 277 (363)
T ss_dssp CCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEE--EEEECBT
T ss_pred EecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEE--EEEEEEh
Confidence 621 112 45554444554332211 11110 11234899999888999999 9999999
Q ss_pred --CCcCCceeeeeee
Q psy11549 236 --KGRSLPVIWDDFS 248 (261)
Q Consensus 236 --~G~~~~s~~~~~~ 248 (261)
.|.......+.+.
T Consensus 278 ~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 278 AKTGKLHQEVNLVVM 292 (363)
T ss_dssp TTTCCEEEEEEEEEE
T ss_pred hhcCeEEEEEeEEEE
Confidence 8866555555443
No 54
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.89 E-value=7.5e-22 Score=141.22 Aligned_cols=145 Identities=19% Similarity=0.316 Sum_probs=110.5
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||.++..+.. ...+++|.|.+++.+|+|.|+|.+.|. +.. +..+.|.|..+|.+...... ..+..|+.+.|.
T Consensus 40 ~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~-~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~l~ 113 (190)
T 2wv3_A 40 TKNGVELTATRK---NASNMEYRINKPRAEDSGEYHCVYHFV-SAP-KANATIEVKAAPDITGHKRS-ENKNEGQDAMMY 113 (190)
T ss_dssp EETTEECTTCCB---CCSEEEEEESSCCGGGCEEEEEEEEET-TEE-EEEEEEEEECCCEEEEECSE-EEEETTSCEEEE
T ss_pred EECCEECcccce---EeccEEEEEecCCcccCEEEEEEEEeC-Ccc-cccEEEEEecCCcccccCCc-ceeeCCCcEEEE
Confidence 478888864322 115578999999999999999999998 655 67889999998887755444 668899999999
Q ss_pred EEEeeCCCCceeEEEEcCCcccccc--CCceEE--eCCceeEEEEecCC-CCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDV--GSERFS--SGSRGSMLRYTPVT-ELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~--~~~~~~--~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
|.+.+.|.+ .+.|++++++..+.. ...++. .......|.|.++. .+|+|.|+|.|.|..|.......+.|.
T Consensus 114 C~~~g~p~p-~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 114 CKSVGYPHP-EWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEECSSCC-EEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEeCccCCC-ceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 999998888 899999533333221 223332 23444579999999 799999999999999988876666554
No 55
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.89 E-value=2.3e-22 Score=151.44 Aligned_cols=209 Identities=15% Similarity=0.123 Sum_probs=139.6
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccC---CCCCCEe--EEEEEEeCCCcceeeeEEEEEEeec--eeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKV---SRQSAGT--YKCSAINTKGEATSNQLKLRVKYAP--ICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~---~~~D~G~--Y~C~~~~~~~~~~s~~~~l~V~~~p--~~~~~~~~~~~~~~ 73 (261)
+|||++|.. .....+..|.+..+ +.+|+|. |+|.+.|..+.. +..+.|.|...| .+... . ..+.+
T Consensus 41 ~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~-~~~~~l~V~~~p~p~~~~~--~-~~v~~ 112 (265)
T 2oz4_A 41 ALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ-ETLQTVTIYSFPAPNVILT--K-PEVSE 112 (265)
T ss_dssp EETTEECCC----EEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEE-EEEEEEEEECCCCCEEEES--C-SEEET
T ss_pred EeCCEECCc----eEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCc-EEEEEEEEeCCCCceeecC--C-ceecC
Confidence 478888843 45556668888777 7888885 999999998876 667888887533 33322 1 34678
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC-ceEE-eeEEEEE
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI-GTQV-TPCLYQV 151 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~-~~~~~~v 151 (261)
|+.+.|.|.+. |.+ .+.| ++. .+.. .+....|.+..+..+|.|.|+|.|.|.. |... .+..+.+
T Consensus 113 G~~v~l~C~~~--p~~-~i~W--~g~--~~~~-------~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l 178 (265)
T 2oz4_A 113 GTEVTVKCEAH--PRA-KVTL--NGV--PAQP-------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTREL 178 (265)
T ss_dssp TCEEEEEEECC--TTS-EEEE--SSC--SSSC-------CSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEE
T ss_pred CCcEEEEEEcc--CCC-EEEE--CCE--EccC-------CCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEE
Confidence 99999999998 556 8999 543 2211 1233468899999999999999998543 5443 2234455
Q ss_pred EeCCCCCC-----CCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 152 VLAGKPQP-----PQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 152 ~~~~~p~~-----p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
.+..+|.. |....+ ..|+.+.|.|.+ .+.|...+.|++..... . .. ..+. .++.+|+|.|
T Consensus 179 ~V~~~p~~~~~~~p~~~~v--~~g~~~~l~C~~---~g~P~p~i~W~~~~~~~------~-~~-g~~~--~v~~~d~G~Y 243 (265)
T 2oz4_A 179 RVLYGPRLDERDCPGNWTW--PENSQQTPMCQA---WGNPLPELKCLKDGTFP------L-PI-GESV--TVTRDLEGTY 243 (265)
T ss_dssp EEEEEEECCGGGSCSEEEE--ETTCEECCCCCC---EEESCCEEEEEETTTEE------C-CT-TSCE--ECCGGGCEEE
T ss_pred EEEeCCccccccCCCccEE--cCCCeEEEEeEC---ccCCCCeEEEEECCccc------C-CC-CcEE--EeehhhCeEE
Confidence 55555532 233333 569999999997 44454434455554411 1 11 2233 2558999999
Q ss_pred EEEEEEEcCCCcCCceeeeeee
Q psy11549 227 RVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 227 ~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+|.|.|..|....+..+.+.
T Consensus 244 --~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 244 --LCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp --EEEEEETTEEEEEEEEEEEE
T ss_pred --EEEEECCCCcEEEEEEEEEe
Confidence 99999999988777776664
No 56
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.89 E-value=2.5e-22 Score=158.01 Aligned_cols=198 Identities=11% Similarity=0.085 Sum_probs=133.3
Q ss_pred EEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEee-----CCCCc
Q psy11549 16 ILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEA-----DPPAR 90 (261)
Q Consensus 16 ~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-----~~~~~ 90 (261)
...+.+|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|...|... ....+.+|+.+.|.|.+.+ .|.+
T Consensus 138 ~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~-~~~~~l~v~~~p~~~----~~~~~~~G~~v~l~C~~~~~~~~~~P~p- 211 (363)
T 1wio_A 138 IQGGKTLSVSQLELQDSGTWTCTVLQNQKKV-EFKIDIVVLAFQKAS----SIVYKKEGEQVEFSFPLAFTVEKLTGSG- 211 (363)
T ss_dssp EEESSEEEECSBCGGGCEECEEEEEETTEEE-EECCEECEECCSCSE----EEEEEETBCCEEEECCCCCCCCSSCEEE-
T ss_pred cccceEEEEeeCChhcCCEEEEEEecCCCeE-EEEEEEEEecCCCCC----CceEEecCCEEEEEEEEecccccCCCce-
Confidence 4466799999999999999999999875544 555677776555422 2366789999999998877 5555
Q ss_pred eeEEEEcCCccccc-----cCCceEEe------------CCceeEEEEecCCCCcCeEEEEEEEcC--CceEEeeEEEEE
Q psy11549 91 SFKWKFNNSGETLD-----VGSERFSS------------GSRGSMLRYTPVTELDYGTLSCAAQNA--IGTQVTPCLYQV 151 (261)
Q Consensus 91 ~~~W~~~~~~~~~~-----~~~~~~~~------------~~~~~~l~i~~~~~~d~g~y~C~~~~~--~~~~~~~~~~~v 151 (261)
.+.|++++...... ....++.. ......|.|.++..+|+|.|+|.|.|. .|.......+.|
T Consensus 212 ~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V 291 (363)
T 1wio_A 212 ELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVV 291 (363)
T ss_dssp EEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEE
T ss_pred eEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEE
Confidence 89999987532210 01222222 222447999999999999999999999 887666444443
Q ss_pred EeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 152 VLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
. ...|..+.|.|.+ .+..++. ...|++....... ...+.|.++..+|+|.| +|
T Consensus 292 ~--------------~v~g~~~~l~C~~--~g~p~p~~~i~W~~~~~~~~~--------~~~l~i~~v~~~d~G~Y--~C 345 (363)
T 1wio_A 292 M--------------RATQLQKNLTCEV--WGPTSPKLMLSLKLENKEAKV--------SKREKAVWVLNPEAGMW--QC 345 (363)
T ss_dssp E--------------EECCCSSSEEEEE--ESSCCTTCCEEEECSSSSCSE--------EESSSEEEESSCCSEEE--EE
T ss_pred E--------------EecCCCeeEEEEE--ccccCCCccEEEEeCCCceee--------eeeeeeeeeccccceeE--EE
Confidence 3 1238889999997 3333333 1344444433211 23456778889999999 99
Q ss_pred EEEcCCCcCCceeeee
Q psy11549 231 SGVNAKGRSLPVIWDD 246 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~ 246 (261)
.|.|. |....+.-++
T Consensus 346 ~a~~~-~~~~~~~~~~ 360 (363)
T 1wio_A 346 LLSDS-GQVLLESNIK 360 (363)
T ss_dssp EECSS-SSCCEEEEEE
T ss_pred EEecC-CeEEEecceE
Confidence 99865 4444444443
No 57
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=161.65 Aligned_cols=232 Identities=11% Similarity=0.066 Sum_probs=139.0
Q ss_pred CCCCeeccCCCCce--EEEEC------CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEE----EeeceeecCceeE
Q psy11549 1 MAGGIPLAHNTSAR--IILSN------QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRV----KYAPICKSDRIVI 68 (261)
Q Consensus 1 ~~ng~~l~~~~~~~--~~~~~------~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V----~~~p~~~~~~~~~ 68 (261)
+|||++|..+.... ....+ ..|.|.+++.+|+|.|+|.|.|..+.. ...+.+.+ ..+|.+......
T Consensus 151 ~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~P~v~~~~~~- 228 (523)
T 2rcj_C 151 KADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV-EKTVAPTECSASTKGPSVFPLAPS- 228 (523)
T ss_pred ecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccc-ccceeeeecCCCCcCCEEEecCCC-
Confidence 58888885321111 01112 269999999999999999999988765 33344322 234544422222
Q ss_pred EEeeCCCcEEEEEEEeeC-CCCceeEEEEcCCccccccCCceEEeCCc----eeEEEEecCCCCcCeEEEEEEEcCCceE
Q psy11549 69 VGASRSESVDIHCAVEAD-PPARSFKWKFNNSGETLDVGSERFSSGSR----GSMLRYTPVTELDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 143 (261)
..+..|+.+.|.|.+.+. |.|..+.|++++...... ........+. .+.|.|.++..+| |.|+|.|.|..|..
T Consensus 229 ~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 229 SKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVH-TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 306 (523)
T ss_pred cccccCCceEEEEEEeceeCCCeEEEEecCCcccceE-eCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence 345789999999999887 556589999987531110 0111111111 3479999999999 99999999998875
Q ss_pred EeeEEEEEEeCCCCC----CCCcceEEeecCCeEEEEeecCCCCCCCe---EEEEEEEeCCccceeE---EEecCC----
Q psy11549 144 VTPCLYQVVLAGKPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQ---TFTLELYSASDLNLLV---NLTNLD---- 209 (261)
Q Consensus 144 ~~~~~~~v~~~~~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~---~~~~~~~~~~~~~~~~---~~~~~~---- 209 (261)
... ..+.+...|. +|.... ....|+.+.|.|.+ .+..|. .-+.|+++........ ......
T Consensus 307 ~~~--~~l~v~~~P~~~~~~p~~~~-~v~~g~~~~l~C~~--~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~ 381 (523)
T 2rcj_C 307 KVD--KRVEPLSLPSVFLFPPKPKD-TLMISRTPEVTCVV--VDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYR 381 (523)
T ss_pred ceE--EecCCCcCceEEecCCCchh-hcccCCceEEEEEE--ecccCCCCceEEEEEECCeEccCCccCCceecCCCcEE
Confidence 543 3333333332 222221 02349999999997 333332 2334444432221000 000111
Q ss_pred -CCcEEEcCCCCCCccEEEEEEEEEcCCCcCCcee
Q psy11549 210 -TPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVI 243 (261)
Q Consensus 210 -~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~ 243 (261)
...|.|.++..+|+|.| +|.|.|..|....+.
T Consensus 382 ~~s~L~i~~~~~~d~G~Y--~C~a~n~~~~~~~~~ 414 (523)
T 2rcj_C 382 VVSVLTVLHQNWLDGKEY--KCKVSNKALPAPIEK 414 (523)
T ss_pred EEEEEEECHHHhcCCCeE--EEEEeCCCCCCceeE
Confidence 13477877778899999 999999988665443
No 58
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.88 E-value=2.3e-21 Score=159.68 Aligned_cols=216 Identities=14% Similarity=0.152 Sum_probs=134.6
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcc--eeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCCC-ceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEA--TSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPPA-RSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~--~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~ 93 (261)
+|.|.+++.+|+|.|+|.|.|..|.. ....+.|.|. .+|.+...... ..+..|+.+.|.|.+.+.+++ ..+.
T Consensus 71 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~ 149 (523)
T 2rcj_C 71 SLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPS-SEELQANKATLVCLISDFYPGAVTVA 149 (523)
T ss_pred EEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCc-ccccCCCceEEEEEeccccCCceEEE
Confidence 79999999999999999999986532 2345678873 45554433322 345679999999999988764 4899
Q ss_pred EEEcCCccccccCCceE--Ee-CCc----eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcc---
Q psy11549 94 WKFNNSGETLDVGSERF--SS-GSR----GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNC--- 163 (261)
Q Consensus 94 W~~~~~~~~~~~~~~~~--~~-~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~--- 163 (261)
|++++.. +....... .. .+. .+.|.|.++..+|+|.|+|.|.|..+.......+.+ +...+.+|...
T Consensus 150 W~k~g~~--l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~-~~~~~~~P~v~~~~ 226 (523)
T 2rcj_C 150 WKADGSP--VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE-CSASTKGPSVFPLA 226 (523)
T ss_pred EecCCCC--CCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeee-cCCCCcCCEEEecC
Confidence 9998743 21111100 00 111 236999999999999999999998776554322211 11112222111
Q ss_pred -eEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccce-eE-EEecCC-----CCcEEEcCCCCCCccEEEEEEEEEc
Q psy11549 164 -SVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNL-LV-NLTNLD-----TPAFTLEDLGLDGTVLMRVVISGVN 234 (261)
Q Consensus 164 -~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~-~~-~~~~~~-----~~~~~i~~~~l~~~~~Y~~~~~a~N 234 (261)
......|+.+.|.|.+ .+..|.. -+.|+++...... .. ...... ...|.|.++...+ |.| +|.|.|
T Consensus 227 ~~~~~~~G~~~~l~C~~--~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y--~C~a~n 301 (523)
T 2rcj_C 227 PSSKSTSGGTAALGCLV--KDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNH 301 (523)
T ss_pred CCcccccCCceEEEEEE--eceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceE--EEEEEe
Confidence 1112469999999997 4443433 2333444322111 11 111111 1378999988889 999 999999
Q ss_pred CCCcCCceeee
Q psy11549 235 AKGRSLPVIWD 245 (261)
Q Consensus 235 ~~G~~~~s~~~ 245 (261)
..|.......+
T Consensus 302 ~~g~~~~~~~l 312 (523)
T 2rcj_C 302 KPSNTKVDKRV 312 (523)
T ss_pred CCCCcceEEec
Confidence 99976554443
No 59
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.88 E-value=4.9e-21 Score=136.78 Aligned_cols=148 Identities=16% Similarity=0.316 Sum_probs=110.8
Q ss_pred CC-CCeeccCCCCceEEEECC---eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCc
Q psy11549 1 MA-GGIPLAHNTSARIILSNQ---SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 1 ~~-ng~~l~~~~~~~~~~~~~---~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 76 (261)
+| ||+++.... +.....++ +|.|.+++.+|+|.|+|.+.|..|...+..+.|.|..+|.+...... ..+..|+.
T Consensus 36 ~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~ 113 (189)
T 2v44_A 36 YNPQGEKIISTQ-RVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSP-QEFKQGED 113 (189)
T ss_dssp ECTTSCBCCCCS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCS-EEEETTSC
T ss_pred EeCCCCccCCCc-eEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCc-EEEeCCCC
Confidence 35 788776443 34444444 99999999999999999999998876677889999888877654443 56889999
Q ss_pred EEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 77 VDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 77 ~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
+.|.|.+.+.|.| .+.|++++..... ....++..... ..|.|.++..+|+|.|+|.|.|..+.......+.+.|
T Consensus 114 ~~l~C~~~g~p~p-~v~W~~~~~~~~~-~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 114 AEVVCRVSSSPAP-AVSWLYHNEEVTT-ISDNRFAMLAN-NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp EEECCEEECSSCC-EEEEEEEC--CEE-CCCTTEEECTT-SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred EEEEEEECcCCCC-cEEEEECCcEEec-cCCCCEEEecC-CcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEEE
Confidence 9999999998888 8999998753221 22334433332 2699999999999999999999987666544555544
No 60
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.88 E-value=9.5e-21 Score=136.17 Aligned_cols=148 Identities=20% Similarity=0.224 Sum_probs=111.6
Q ss_pred CCCCeeccCCCCceEEE--ECC--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCce----eEEEee
Q psy11549 1 MAGGIPLAHNTSARIIL--SNQ--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRI----VIVGAS 72 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~--~~~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~----~~~~~~ 72 (261)
+|||+++..+..+.... .++ +|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|..+|.+..+.. ....+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~-~~~~~l~V~~~p~~~~~~~~~~~~~~~~~ 117 (197)
T 2j8h_A 39 YRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSV-SGTASLEVEVPAKIHLPKTLEGMGAVHAL 117 (197)
T ss_dssp EETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEE-EEEEEEEEEEEEEECCSSCBTTBEEEEEE
T ss_pred EECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCce-eEEEEEEEcCCCcCCCCccccccCeEEEe
Confidence 57888887544434332 233 89999999999999999999998876 6788999998887654331 336688
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEec-CCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTP-VTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
.|+.+.|.|.+.+.|.+ .+.|++++.... ......+........|.|.+ +..+|+|.|+|.|.|..|.......+.|
T Consensus 118 ~g~~~~l~C~~~g~p~p-~i~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 118 RGEVVSIKIPFSGKPDP-VITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp TTCCCEEEEEEEEESCC-EEEEEESSCEEC-SSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEecCCC-cEEEEECCEEee-cCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEE
Confidence 99999999999998888 899999874221 12222333344566899999 9999999999999999998766444433
No 61
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.88 E-value=4.3e-21 Score=137.27 Aligned_cols=148 Identities=20% Similarity=0.298 Sum_probs=111.1
Q ss_pred CC-CCeeccCCCCceEEEE----CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCC
Q psy11549 1 MA-GGIPLAHNTSARIILS----NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSE 75 (261)
Q Consensus 1 ~~-ng~~l~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~ 75 (261)
+| ||+++.....+..... +++|.|.+++.+|+|.|+|.+.+..+...+..+.|.|..+|.+...+.. ..+..|+
T Consensus 38 ~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~ 116 (191)
T 1epf_A 38 FSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTP-QEFKEGE 116 (191)
T ss_dssp ECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSS-EECCTTS
T ss_pred EeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCc-EeecCCC
Confidence 35 8888875544444432 3589999999999999999999998655577888999888887655544 6678999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
.+.|.|.+.+.|.+ .+.|++++..... ....++..... ..|.|.++..+|+|.|+|.|.|..+.......+.+.
T Consensus 117 ~~~l~C~~~g~p~~-~v~W~~~~~~~~~-~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 117 DAVIVCDVVSSLPP-TIIWKHKGRDVIL-KKDVRFIVLSN-NYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp CEEECCEEECSSCC-EEEEEETTEEGGG-GCCTTEEECTT-SCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred eEEEEEEECCCCCC-EEEEEECCEEeec-cCCceEEEecC-CeEEECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 99999999998888 7999998753222 22333333322 269999999999999999999988655554455443
No 62
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.88 E-value=3.7e-21 Score=137.71 Aligned_cols=149 Identities=25% Similarity=0.311 Sum_probs=111.4
Q ss_pred CCCCeeccCCCCceEEEEC-CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTSARIILSN-QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~-~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
+|||.++.....+.....+ .+|.|.+++.+|+|.|+|.+.|..+...+..+.|.|..+|.+...... ..+..|+.+.|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~-~~~~~g~~~~l 120 (192)
T 2iep_A 42 TRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPIN-VKIIEGLKAVL 120 (192)
T ss_dssp EETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCC-EEEETTSCEEE
T ss_pred EECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcc-eEEeCCCcEEE
Confidence 4788888755555554443 479999999999999999999988876566788999988887765544 67889999999
Q ss_pred EEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCC
Q psy11549 80 HCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGK 156 (261)
Q Consensus 80 ~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 156 (261)
.|.+.+.|.+ .+.|++++. .+.. ..++..... ..|.|.++..+|+|.|+|.|.|..|..... .+.+.|..+
T Consensus 121 ~C~~~g~p~~-~v~W~~~~~--~~~~-~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~-~~~l~V~~p 191 (192)
T 2iep_A 121 PCTTMGNPKP-SVSWIKGDS--ALRE-NSRIAVLES-GSLRIHNVQKEDAGQYRCVAKNSLGTAYSK-LVKLEVEVF 191 (192)
T ss_dssp CCEEEEESCC-EEEEEETTE--ECCC-CSSEEECTT-SCEEESSCCGGGCEEEEEEEEETTEEEECC-CEEEEEEC-
T ss_pred EEEEeccCCc-eEEEEeCCE--EccC-CCcEEEecC-CcEEEecCChhhCEEEEEEEEcCCCcEEEE-EEEEEEEeC
Confidence 9999998888 899999874 2222 222322222 269999999999999999999998877432 334444333
No 63
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=7.3e-21 Score=138.33 Aligned_cols=148 Identities=15% Similarity=0.238 Sum_probs=106.1
Q ss_pred CCCCeeccCCCCceEEEECC--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe--------------------e
Q psy11549 1 MAGGIPLAHNTSARIILSNQ--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY--------------------A 58 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~--------------------~ 58 (261)
+|||++|..+++......++ +|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|.. .
T Consensus 38 ~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 116 (212)
T 2r15_A 38 SHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH-QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNR 116 (212)
T ss_dssp EETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEE-EEEEEECHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcce-EEEEEEEEeeccchhhhccccCcccccccCC
Confidence 57899987654433334443 49999999999999999999987765 4556665542 2
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC-ceEEeC-CceeEEEEecCCCCcCeEEEEEE
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS-ERFSSG-SRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~~-~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
|.+.........+..|+.+.|.|.+.+.|.| .+.|++++.. +.... ..+... +....|.|.++..+|+|.|+|.|
T Consensus 117 p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~v~W~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 193 (212)
T 2r15_A 117 ARVLGGLPDVVTIQEGKALNLTCNVWGDPPP-EVSWLKNEKA--LAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVV 193 (212)
T ss_dssp CEEEEBCCSEEEEETTCCEEEEEEEECSSCC-EEEEEETTEE--ECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CcccccCCCcEEEccCCeEEEEEEEcCCCCc-eEEEEECCeE--CccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEE
Confidence 2233222223678899999999999999888 7999998742 22222 222222 44568999999999999999999
Q ss_pred EcCCceEEeeEEEEEE
Q psy11549 137 QNAIGTQVTPCLYQVV 152 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~ 152 (261)
.|..|.......+.|.
T Consensus 194 ~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 194 KNKYGSETSDFTVSVF 209 (212)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEEEE
Confidence 9999987775555443
No 64
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.87 E-value=1.1e-20 Score=135.46 Aligned_cols=146 Identities=20% Similarity=0.232 Sum_probs=108.7
Q ss_pred CCCCeeccCCC--CceEEEECC--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE---eeceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNT--SARIILSNQ--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK---YAPICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~--~~~~~~~~~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~---~~p~~~~~~~~~~~~~~ 73 (261)
+|||+++.... .......++ +|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|. .+|.+...... ..+..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~-~~~~~l~v~~~~~~p~~~~~~~~-~~~~~ 117 (194)
T 2a38_A 40 FRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQA-TSTAELLVKAETAPPNFVQRLQS-MTVRQ 117 (194)
T ss_dssp EESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCEEEEEEECCCC-EEECT
T ss_pred EECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceE-eEEEEEEEccCCCCCEEEeCCcc-EEEcC
Confidence 47888886443 334444444 89999999999999999999988776 556788887 56665544443 67889
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
|+.+.|.|.+.+.|.+ .+.|++++.... ......+...+....|.|.++..+|.|.|+|.|.|..|.......+.
T Consensus 118 g~~~~l~C~~~g~p~~-~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 192 (194)
T 2a38_A 118 GSQVRLQVRVTGIPTP-VVKFYRDGAEIQ-SSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELL 192 (194)
T ss_dssp TEEEEEEEEEEEESCC-EEEEEETTEECC-CSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEEEEEEecCC-eEEEEECCEECC-CCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEE
Confidence 9999999999998888 799999874221 11222233344455799999999999999999999999877644443
No 65
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.87 E-value=1.1e-20 Score=134.91 Aligned_cols=149 Identities=17% Similarity=0.308 Sum_probs=109.7
Q ss_pred CCCCeeccC-CCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEeeceeecCcee-EEEeeCCCcE
Q psy11549 1 MAGGIPLAH-NTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKYAPICKSDRIV-IVGASRSESV 77 (261)
Q Consensus 1 ~~ng~~l~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~~p~~~~~~~~-~~~~~~g~~~ 77 (261)
+|||.++.. ...+.....+++|.|.+++.+|+|.|+|.+.+..+. .....+.|.|..+|.+...... ...+..|+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v 116 (189)
T 2v5t_A 37 LYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEM 116 (189)
T ss_dssp EC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCE
T ss_pred EECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcE
Confidence 467777753 345566667789999999999999999999988744 3345678888888877654432 3567789999
Q ss_pred EEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 78 DIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 78 ~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
.|.|.+.+.|.+ .+.|++++.. +.. ..++........|.|.++..+|+|.|+|.|.|..|.......+.|.+
T Consensus 117 ~l~C~~~g~p~~-~v~W~~~g~~--~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 117 TFSCRASGSPEP-AISWFRNGKL--IEE-NEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp EEECEEEEESCC-EEEEEETTEE--CCC-SSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEccCCCC-eEEEEECCEE--CcC-CCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 999999998888 8999998742 222 22334444445799999999999999999999999888766666654
No 66
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=1.3e-20 Score=134.77 Aligned_cols=146 Identities=23% Similarity=0.319 Sum_probs=108.4
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||+++...........+.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+|.+..... ..+..|+.+.|.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~--~~~~~g~~v~l~ 115 (192)
T 2va4_A 39 FRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGED-EKQAFLQVFVQPHIIQLKN--ETTYENGQVTLV 115 (192)
T ss_dssp EETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEEECC--EEECTTSEEEEE
T ss_pred EECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcccccc-ceEEEEEEEccCcccccCc--ceEEeCCeEEEE
Confidence 4788888654332222334589999999999999999999988776 5678899988887664432 446679999999
Q ss_pred EEEeeCCCCceeEEEEcCCcccccc----CCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDV----GSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~----~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
|.+.+.|.+ .+.|++++.+..+.. ...++. .......|.|.++..+|+|.|+|.|.|..|.......+.
T Consensus 116 C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 190 (192)
T 2va4_A 116 CDAEGEPIP-EITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD 190 (192)
T ss_dssp EEEEEESCC-EEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred EEecCCCCC-cEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEE
Confidence 999998888 899999854433321 112222 233456899999999999999999999999876644443
No 67
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.87 E-value=1.1e-20 Score=137.60 Aligned_cols=151 Identities=21% Similarity=0.336 Sum_probs=109.8
Q ss_pred CCCCeeccCCCCceEEEE--C--CeEEEccCCC-CCCEeEEEEEEeCCCcceeeeEEEEEEee-------ceeecCceeE
Q psy11549 1 MAGGIPLAHNTSARIILS--N--QSLVLQKVSR-QSAGTYKCSAINTKGEATSNQLKLRVKYA-------PICKSDRIVI 68 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~--~--~~L~i~~~~~-~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~-------p~~~~~~~~~ 68 (261)
+|||+++.....+..... + .+|.|.+++. +|+|.|+|.+.|..|...+..+.|.|... |.+...+..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~- 119 (212)
T 2yd1_A 41 RKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGT- 119 (212)
T ss_dssp EETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCC-
T ss_pred EECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCc-
Confidence 478888874444444432 3 3899999999 99999999999998884477888999865 454443333
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++..... .|.|.++..+|+|.|+|.|.|..|..... .
T Consensus 120 ~~~~~g~~v~l~C~~~g~p~p-~i~W~~~~~~--~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~-~ 193 (212)
T 2yd1_A 120 RVIEVGHTVLMTCKAIGNPTP-NIYWIKNQTK--VDMSNPRYSLKDG--FLQIENSREEDQGKYECVAENSMGTEHSK-A 193 (212)
T ss_dssp EEEETTCCEEECCEEECSSCC-EEEEEETTEE--CCTTSTTEEEETT--EEEECSCCGGGCEEEEEEEEETTEEEECC-C
T ss_pred eEeecCCeEEEEEEeccCCCC-eEEEEECCeE--cccCCCeEEccCC--eEEEccCChhhCEEEEEEeecCCCceeEE-E
Confidence 567889999999999999888 8999998742 3222333333333 79999999999999999999999987653 2
Q ss_pred EEEEeCCCCC
Q psy11549 149 YQVVLAGKPQ 158 (261)
Q Consensus 149 ~~v~~~~~p~ 158 (261)
+.+.|...+.
T Consensus 194 ~~l~V~~~~~ 203 (212)
T 2yd1_A 194 TNLYVKVRRV 203 (212)
T ss_dssp EEEEEEC---
T ss_pred EEEEEEeccc
Confidence 3344434443
No 68
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.87 E-value=1.2e-20 Score=136.56 Aligned_cols=140 Identities=14% Similarity=0.192 Sum_probs=100.5
Q ss_pred CCCCeeccCCCCceEEEEC--C--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE--------------------
Q psy11549 1 MAGGIPLAHNTSARIILSN--Q--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK-------------------- 56 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~--~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~-------------------- 56 (261)
||||++|..+....+...+ + +|.|.+++.+|+|.|+|.|.| |.. ...+.+.+.
T Consensus 38 ~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (207)
T 3rbs_A 38 IFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--GKA-TNHSTVVLVGDVFKKLQKEAEFQRQEWIR 114 (207)
T ss_dssp EETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--TTE-EEEEEEEECTHHHHHHHHHHHHHHHHHHH
T ss_pred EECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--CCe-EEEEEEEEEccchhhhccccccccccccc
Confidence 5899999765544444433 2 699999999999999999999 443 233333221
Q ss_pred -eeceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEE
Q psy11549 57 -YAPICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 57 -~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
.+|.+.... . ..+.+|+.+.|.|.+.+. |.| .+.|++++.. +.. ..++........|.|.++..+|+|.|+|
T Consensus 115 ~~~P~~~~~~-~-~~v~~g~~v~l~C~v~g~~P~p-~i~W~k~g~~--l~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 188 (207)
T 3rbs_A 115 KQGPHFVEYL-S-WEVTGECNVLLKCKVANIKKET-HIVWYKDERE--ISV-DEKHDFKDGICTLLITEFSKKDAGIYEV 188 (207)
T ss_dssp HTSSEEEEEE-E-EEEETTTEEEEEEEEESCCTTC-EEEEEETTEE--ECC-CCCCCCSSEEEEEEETTCCGGGCEEEEE
T ss_pred CCCCceEecC-C-cEEcCCCcEEEEEEEeCCCCCC-EEEEEECCEE--CCC-CCceEcCCCEEEEEECCCCcccCEEEEE
Confidence 134443332 2 567899999999999998 677 8999998742 222 2233344445579999999999999999
Q ss_pred EEEcCCceEEeeEEE
Q psy11549 135 AAQNAIGTQVTPCLY 149 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~ 149 (261)
.|.|..|.......+
T Consensus 189 ~a~N~~G~~~~~~~L 203 (207)
T 3rbs_A 189 ILKDDRGKDKSRLKL 203 (207)
T ss_dssp EEEETTEEEEEEEEE
T ss_pred EEEcCCCEEEEEEEE
Confidence 999999988775443
No 69
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.87 E-value=2.6e-22 Score=161.71 Aligned_cols=213 Identities=13% Similarity=0.158 Sum_probs=125.2
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCC--CCceeEEEEc
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADP--PARSFKWKFN 97 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~ 97 (261)
++|.|.+++.+|+|.|+|.|.|..+.. .....+.+...+.....+. ...+..|+.+.|.|.+.+.| .+ .+.|+++
T Consensus 181 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~~~~~-~~~v~~G~~v~L~C~~~g~p~~~~-~v~W~k~ 257 (438)
T 1qgc_4 181 STLTLTKDEYERHNSYTCEATHKTSTS-PIVKSFNRNECEVMLVESG-GGLVKPGGSLKLSCTASGFIFNRC-AMSWVRQ 257 (438)
T ss_dssp EEEEEEHHHHHTCCEEEEEEEETTCSS-CEEEEEETTC-CCEEEEEC-CEEECTTCCEEEEEEEESSCGGGS-CEEEEEE
T ss_pred EEEEEeCcccCCCCeEEEEEEecccCC-ceecccccccceeEEecCC-ceEEecCCcEEEEEEEcccccCCc-EEEEEEC
Confidence 479999999999999999999987764 2222222111111111112 25688999999999999888 34 8999986
Q ss_pred CCccccc----------------cCCceEEe----CCceeEEEEecCCCCcCeEEEEEEEcCCc-----eEEeeEEEEEE
Q psy11549 98 NSGETLD----------------VGSERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNAIG-----TQVTPCLYQVV 152 (261)
Q Consensus 98 ~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-----~~~~~~~~~v~ 152 (261)
..+.... ....++.. ......|.|.++..+|+|.|+|.|.|..+ .......+.|.
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~ 337 (438)
T 1qgc_4 258 TPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVS 337 (438)
T ss_dssp ETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEEC
T ss_pred CCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEe
Confidence 2111111 01122322 12355899999999999999999998433 11122233333
Q ss_pred eCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccce-eE-EEecCC----CCcEEEcCCCCC
Q psy11549 153 LAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNL-LV-NLTNLD----TPAFTLEDLGLD 221 (261)
Q Consensus 153 ~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~-~~-~~~~~~----~~~~~i~~~~l~ 221 (261)
. .++.+|..... ....|+.++|.|.+ .+..|.. .+.|+++...... .. ...... ...|.|.++...
T Consensus 338 ~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~ 414 (438)
T 1qgc_4 338 A-AKTTPPSVYPLAPGSAAAAASMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWP 414 (438)
T ss_dssp S-SCCBCCEEEEECCCGGGCCSSEEEEEEEE--ESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHH
T ss_pred c-CCCCCCeEEEcCcccccccCCcEEEEEEe--ccccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcC
Confidence 2 22223321111 12358999999997 4443533 3334444322211 11 111111 124778885555
Q ss_pred CccEEEEEEEEEcCCCcCCc
Q psy11549 222 GTVLMRVVISGVNAKGRSLP 241 (261)
Q Consensus 222 ~~~~Y~~~~~a~N~~G~~~~ 241 (261)
+ |.| +|.|.|.+|....
T Consensus 415 d-g~Y--~C~a~n~~g~~~~ 431 (438)
T 1qgc_4 415 S-ETV--TCNVAHPASSTKV 431 (438)
T ss_dssp H-SCC--EEEEEEGGGTEEE
T ss_pred C-ceE--EEEEEeCCCCcce
Confidence 7 999 9999999996543
No 70
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.86 E-value=1e-23 Score=181.11 Aligned_cols=218 Identities=16% Similarity=0.200 Sum_probs=0.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
.+|.|.++ +|+|.|+|.|.|..|.. +..+.|.|..+|.+...+. ..+.+|+.+.|.|.+.+.|.+ .+.|++++.
T Consensus 515 ~~L~i~~~--~d~G~Y~C~a~N~~g~~-~~~~~l~V~~~p~i~~~p~--~~~~~G~~v~l~C~~~~~p~~-~v~W~k~~~ 588 (772)
T 3v2a_R 515 STLVIQAA--NVSALYKCEAVNKVGRG-ERVISFHVTRGPEITLQPD--MQPTEQESVSLWCTADRSTFE-NLTWYKLGP 588 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeec--ccCeEEEEEEEcccccc-ceeEEEEEECCceeeccCC--cccccCCceEEEEeccCCCCC-CcEEEEcCC
Confidence 47888877 79999999999999876 6678888888776654332 346789999999999998877 899998764
Q ss_pred ccccccCCceE--------------------EeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe--eEEEEEEeCCCC
Q psy11549 100 GETLDVGSERF--------------------SSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT--PCLYQVVLAGKP 157 (261)
Q Consensus 100 ~~~~~~~~~~~--------------------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~--~~~~~v~~~~~p 157 (261)
.... ...... ........|.|.++..+|+|.|+|.|.|..+.... ...+.+.+..+|
T Consensus 589 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P 667 (772)
T 3v2a_R 589 QPLP-IHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAP 667 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-cccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCC
Confidence 2111 000000 01112335999999999999999999996554432 224444434444
Q ss_pred C---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEEEE
Q psy11549 158 Q---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 158 ~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
. .+.+..+ ..|+.+.|.|.+ . +.|..-+.|+++........ .........|.|.++..+|+|.| +|.|.
T Consensus 668 ~~~~~~~~~~v--~~g~~~~l~C~~--~-g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~ 740 (772)
T 3v2a_R 668 TITGNLENQTT--SIGESIEVSCTA--S-GNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLY--TCQAC 740 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EeecCCCceEE--eCCCCEEEEEEe--C-ccCCCeEEEEECCeECcCCCCeEEcCCCcEEEECcCCHHHCEEE--EEEEE
Confidence 3 2223233 459999999997 3 44444334444433221111 11122347899999999999999 99999
Q ss_pred cCCCcCCceeeeeeeecc
Q psy11549 234 NAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 234 N~~G~~~~s~~~~~~~~~ 251 (261)
|.+|....+..+.|..++
T Consensus 741 N~~G~~~~~~~l~V~~~p 758 (772)
T 3v2a_R 741 SVLGCAKVEAFFIIEGAQ 758 (772)
T ss_dssp ------------------
T ss_pred eCCcceeEEEEEEEECCC
Confidence 999999888888876543
No 71
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.86 E-value=3.8e-21 Score=155.50 Aligned_cols=211 Identities=14% Similarity=0.113 Sum_probs=129.8
Q ss_pred CCCCeeccCCCCceEEEECCeEEEc---cCCCCCCE--eEEEEEEeCCCcceeeeEEEEEEe--eceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQ---KVSRQSAG--TYKCSAINTKGEATSNQLKLRVKY--APICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~---~~~~~D~G--~Y~C~~~~~~~~~~s~~~~l~V~~--~p~~~~~~~~~~~~~~ 73 (261)
+|||+++.. .....+..+.+. +++.+|+| .|+|.|.|..+.. +..+.|.|.. +|.+.... ..+.+
T Consensus 226 ~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~-~~~~~l~V~~~~~p~i~~~~---~~v~~ 297 (450)
T 1z7z_I 226 ALGDQRLNP----TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQ-ETLQTVTIYSFPAPNVILTK---PEVSE 297 (450)
T ss_dssp EETTEECCC----EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEE-EEEEEEEEECCCCCEEEESC---SEEET
T ss_pred eCCCEeCCc----eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccE-EEEEEEEEecCCCCeEecCC---eeEeC
Confidence 367777743 233334444433 77999999 9999999998876 5577888886 44443221 35789
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc-eEE-eeEEEEE
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG-TQV-TPCLYQV 151 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~-~~~-~~~~~~v 151 (261)
|+.++|.|.+. |.+ .+.| ++. .+.. .+....|.|..+..+|+|.|+|.|.|..+ ... ....+.+
T Consensus 298 G~~v~l~C~~~--p~p-~i~W--~g~--~~~~-------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l 363 (450)
T 1z7z_I 298 GTEVTVKCEAH--PRA-KVTL--NGV--PAQP-------LGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTREL 363 (450)
T ss_dssp TCEEEEEEEC------------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCcEEEEEecC--CCC-EeEE--CCE--EcCC-------CCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEE
Confidence 99999999998 555 7999 442 2211 12234799999999999999999997554 322 2224445
Q ss_pred EeCCCCCCCCc---ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEE
Q psy11549 152 VLAGKPQPPQN---CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 152 ~~~~~p~~p~~---~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
.+..+|..... ..+....|+.+.|.|.+ .+.|...+.|+++.... . .....+ .++.+|+|.|
T Consensus 364 ~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~---~g~P~p~i~W~~~g~~~------~-~~g~~~---~v~~~d~G~Y-- 428 (450)
T 1z7z_I 364 RVLYGPRLDERDCPGNWTWPENSQQTPMCQA---WGNPLPELKCLKDGTFP------L-PIGESV---TVTRDLEGTY-- 428 (450)
T ss_dssp EEEEEEECCSTTSCSEEEEETTCEECCCCCC---EEESCCEEEEEETTTEE------C-CTTSCE---ECCGGGCEEE--
T ss_pred EEecCCceeeccCCCceeEcCCCeEEEEEec---ccCCCCcEEEEECCccc------C-CCCCeE---eEehhhCeEE--
Confidence 55444432111 23344569999999997 44454434455554311 1 112333 4567999999
Q ss_pred EEEEEcCCCcCCceeeeeee
Q psy11549 229 VISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~~~ 248 (261)
+|.|.|.+|....+..+.|.
T Consensus 429 ~C~a~N~~G~~~~~~~l~V~ 448 (450)
T 1z7z_I 429 LCRARSTQGEVTREVTVNVL 448 (450)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCceeEEEEEEEE
Confidence 99999999988877777664
No 72
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.86 E-value=1.8e-20 Score=150.98 Aligned_cols=205 Identities=17% Similarity=0.146 Sum_probs=125.9
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKWKF 96 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W~~ 96 (261)
+|.|.+++.+|+|.|+|.|.|..+......+.|.|.. +|.+...... .....|+.+.|.|.+.+. |.+..+.|++
T Consensus 76 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 154 (438)
T 1qgc_4 76 TLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKI 154 (438)
T ss_dssp EEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEE
T ss_pred EEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCC-hhhccCCceEEEEEEccccCCCcEEEEEE
Confidence 7999999999999999999998775434556777753 3443321111 112358899999999884 4444899999
Q ss_pred cCCccccccC-C--ceEEeCC-----ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC---CCCcceE
Q psy11549 97 NNSGETLDVG-S--ERFSSGS-----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSV 165 (261)
Q Consensus 97 ~~~~~~~~~~-~--~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v 165 (261)
++.. +... . ....... ..+.|.|.++..+|+|.|+|.|.|..+.... ...+....++. .|.. +
T Consensus 155 ~g~~--~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~--~~~~~~~~~~~~~~~~~~--~ 228 (438)
T 1qgc_4 155 DGSE--RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI--VKSFNRNECEVMLVESGG--G 228 (438)
T ss_dssp TTEE--ECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE--EEEEETTC-CCEEEEECC--E
T ss_pred CCEE--cCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCce--ecccccccceeEEecCCc--e
Confidence 7742 2111 0 0011111 1347999999999999999999998765422 22233211111 1222 2
Q ss_pred EeecCCeEEEEeecCCCCCC--CeEEEEEEEeC-Cccc--------------------eeEEEec---CCCCcEEEcCCC
Q psy11549 166 RNETTSSVHISCTPGYDGGL--PQTFTLELYSA-SDLN--------------------LLVNLTN---LDTPAFTLEDLG 219 (261)
Q Consensus 166 ~~~~~~~~~l~c~~~~~~~~--p~~~~~~~~~~-~~~~--------------------~~~~~~~---~~~~~~~i~~~~ 219 (261)
....|+.++|.|.+ .+.. +..+. |++.. +... ..+.... .....|.|.+++
T Consensus 229 ~v~~G~~v~L~C~~--~g~p~~~~~v~-W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 305 (438)
T 1qgc_4 229 LVKPGGSLKLSCTA--SGFIFNRCAMS-WVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLR 305 (438)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEE-EEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred EEecCCcEEEEEEE--cccccCCcEEE-EEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCC
Confidence 33569999999997 3322 12343 44431 2111 0111111 112479999999
Q ss_pred CCCccEEEEEEEEEcCCC
Q psy11549 220 LDGTVLMRVVISGVNAKG 237 (261)
Q Consensus 220 l~~~~~Y~~~~~a~N~~G 237 (261)
.+|.|.| +|.|.|..|
T Consensus 306 ~~D~G~Y--~C~a~n~~~ 321 (438)
T 1qgc_4 306 SADTAMY--YCVRREDGG 321 (438)
T ss_dssp GGGCCEE--EEEECCSSS
T ss_pred hhhCEEE--EEEEEccCC
Confidence 9999999 999999554
No 73
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=3.9e-20 Score=140.56 Aligned_cols=147 Identities=20% Similarity=0.350 Sum_probs=112.4
Q ss_pred CCCCeeccCCCCceEEEEC--CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEE
Q psy11549 1 MAGGIPLAHNTSARIILSN--QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVD 78 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~--~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~ 78 (261)
+|||.++...........+ ..|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|..+|.+...+.. ..+..|+.+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~ 211 (284)
T 2rik_A 134 YKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSA-SSSTSLKVKEPPVFRKKPHP-VETLKGADVH 211 (284)
T ss_dssp EETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEE-EEEEEEEEECCCBCCSCCCC-EEECTTCCEE
T ss_pred EECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCce-eEEEEEEEecCCcceeCCCc-ceecCCCeEE
Confidence 4788888654432333332 479999999999999999999998876 67789999998887765544 6678999999
Q ss_pred EEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 79 IHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 79 l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
|.|.+.+.|.+ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.|.|..|.......+.|
T Consensus 212 l~C~~~g~p~~-~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 212 LECELQGTPPF-QVSWHKDKRELR-SGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp EEEECBSSSCC-EEEEEETTEEEC-BTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEecCCC-EEEEEECCEECc-CCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEE
Confidence 99999998887 899999874211 112222333444568999999999999999999999998877544443
No 74
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.86 E-value=3.3e-20 Score=133.19 Aligned_cols=142 Identities=15% Similarity=0.232 Sum_probs=105.6
Q ss_pred CCCCeeccCCCCceEEEE-----------CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEE
Q psy11549 1 MAGGIPLAHNTSARIILS-----------NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIV 69 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~-----------~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~ 69 (261)
+|||++|......+.... +++|.|.+++.+|+|.|+|.+.|..+...+..+.|.|..+|.+...+.. .
T Consensus 38 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-~ 116 (195)
T 2c5d_C 38 LRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPED-R 116 (195)
T ss_dssp EETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCC-E
T ss_pred EECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCc-E
Confidence 478888864422122211 3589999999999999999999988776566689999998887665544 6
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEE-eeEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV-TPCL 148 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~ 148 (261)
.+..|+.+.|.|.+.+.|.|..+.|++++.. +...... .....|.|.++. |+|.|+|.|.|..|... ....
T Consensus 117 ~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~--~~~~~~~----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~ 188 (195)
T 2c5d_C 117 TVAANTPFNLSCQAQGPPEPVDLLWLQDAVP--LATAPGH----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTAT 188 (195)
T ss_dssp EECTTCCEEEEEEEECSSCCCEEEEEESSCB--SSSSTTS----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEE
T ss_pred EEcCCCEEEEEeECCCCCCCCEEEEEECCEe--ccCCCCc----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEE
Confidence 7889999999999999887757999998753 2211111 234478999887 78999999999998775 4444
Q ss_pred EEE
Q psy11549 149 YQV 151 (261)
Q Consensus 149 ~~v 151 (261)
+.|
T Consensus 189 l~V 191 (195)
T 2c5d_C 189 ITV 191 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 75
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.86 E-value=9e-21 Score=162.91 Aligned_cols=235 Identities=15% Similarity=0.069 Sum_probs=94.7
Q ss_pred CeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee--ceeecCceeEEEeeCCCcEEEEE
Q psy11549 4 GIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA--PICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 4 g~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~--p~~~~~~~~~~~~~~g~~~~l~C 81 (261)
|..+..+...........|.|.+++.+|+|.|+|.+.+......+..+.+.+... +.+...+.....+..|+.++|.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~v~~G~~v~L~C 246 (772)
T 3v2a_R 167 EKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNC 246 (772)
T ss_dssp TEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCEEEETTCCEEEEE
T ss_pred CccccCCCceeecCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCceEEecCCcEEEEE
Confidence 4455433333344455789999999999999999998765444343344544422 22222111125688999999999
Q ss_pred EEeeCC-CCceeEEEEcCCccccccCCc-eE------EeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 82 AVEADP-PARSFKWKFNNSGETLDVGSE-RF------SSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 82 ~~~~~~-~~~~~~W~~~~~~~~~~~~~~-~~------~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
.+.+.+ +...+.|++++.......... .. ......+.|.|.++..+|+|.|+|.+.+..+.... .+.+.+
T Consensus 247 ~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~--~~~l~V 324 (772)
T 3v2a_R 247 TARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKN--STFVRV 324 (772)
T ss_dssp EEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEE--EEEEEE
T ss_pred EEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeE--EEEEEE
Confidence 999853 233899998774311100000 00 11123457999999999999999999998876655 444555
Q ss_pred CCCCCCCCc----ceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEE
Q psy11549 154 AGKPQPPQN----CSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 154 ~~~p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
..+|..... ..+....|+.+.|.|.+ . +.| ..+. |+++.......... .....|.|.++...++|.|
T Consensus 325 ~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~--~-~~p~~~v~-W~~~g~~l~~~~~~--~~~~~L~i~~v~~~d~G~Y-- 396 (772)
T 3v2a_R 325 HEKPFVAFGSGMESLVEATVGERVRIPAKY--L-GYPPPEIK-WYKNGIPLESNHTI--KAGHVLTIMEVSERDTGNY-- 396 (772)
T ss_dssp ECCCC---------------------------------------------------------------------------
T ss_pred eCCCeeEeccCCCCcEEEcCCCcEEEEEEE--e-eeCCCeEE-EEECCEeCCCCceE--ccceeEEEecCChhcCceE--
Confidence 455542211 12233569999999997 3 344 3344 44443332211111 1347889999899999999
Q ss_pred EEEEEcCCCcCCceeeeeee
Q psy11549 229 VISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~~~ 248 (261)
+|.|.|..|....+..+.+.
T Consensus 397 ~C~a~n~~g~~~~s~~~~l~ 416 (772)
T 3v2a_R 397 TVILTNPISKEKQSHVVSLV 416 (772)
T ss_dssp --------------------
T ss_pred EEEEEECCcCeEEEEEEEEE
Confidence 99999999977655544433
No 76
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.85 E-value=1.3e-19 Score=130.11 Aligned_cols=147 Identities=16% Similarity=0.181 Sum_probs=109.0
Q ss_pred CCCCeeccCCCCceEEEECC---eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecC--ceeEEEeeCCC
Q psy11549 1 MAGGIPLAHNTSARIILSNQ---SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSD--RIVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~---~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~--~~~~~~~~~g~ 75 (261)
+|||.++..+.. .....++ +|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|..+|..... ......+..|+
T Consensus 42 ~~~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~-~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~ 119 (197)
T 3lcy_A 42 YRFGKELIQSRK-YKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEV-ETSSKLLLQATPQFHPGYPLKEKYYGAVGS 119 (197)
T ss_dssp EETTEEECCCSS-EEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEE-EEEEEEEEEEEEEECTTSCCCSEEEEETTS
T ss_pred EECCEECCCCcc-EEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCce-eEEEEEEEEcCCCCCCCccCCcceeecCCC
Confidence 478888865433 4444444 89999999999999999999988876 56788889888776532 12235678999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCC-CcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTE-LDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
.+.|.|.+.+.|.+ .+.|++++.... ......+........|.|.++.. +|+|.|+|.|.|..|.......+.|
T Consensus 120 ~~~l~C~~~~~p~p-~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 120 TLRLHVMYIGRPVP-AMTWFHGQKLLQ-NSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp CEEEEEEEEEESCC-EEEEEETTEECC-CCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEE
T ss_pred eEEEEEEEeeeeCC-eeEEeECCEECC-CCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEE
Confidence 99999999999888 899999774211 11222233344446899999985 8999999999999998877444433
No 77
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.85 E-value=7.9e-20 Score=132.98 Aligned_cols=149 Identities=21% Similarity=0.301 Sum_probs=105.2
Q ss_pred CCCCeeccCCCCceEEEE---CCeEEEccC-CCCCCEeEEEEEEeCCCcceeeeEEEEEEee-------ceeecCceeEE
Q psy11549 1 MAGGIPLAHNTSARIILS---NQSLVLQKV-SRQSAGTYKCSAINTKGEATSNQLKLRVKYA-------PICKSDRIVIV 69 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~---~~~L~i~~~-~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~-------p~~~~~~~~~~ 69 (261)
+|||.++........... +..|.|.++ +.+|+|.|+|.+.|..|.. +..+.|.|... |.+...+.. .
T Consensus 41 ~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~p~~~~~~~~-~ 118 (212)
T 2yd6_A 41 NKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEI-SVSTRLTVLREDQIPRGFPTIDMGPQL-K 118 (212)
T ss_dssp EETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEE-EEEEEEEEECGGGCCTTCCEEEECCCC-E
T ss_pred EECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcE-EEEEEEEEeccCccCCCcceeecCCcc-e
Confidence 478888864332222222 236999999 5999999999999998875 66788888764 344433333 5
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe-e
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT-P 146 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~-~ 146 (261)
.+..|+.+.|.|.+.+.|.+ .+.|++++..........++. .......|.|.++..+|+|.|+|.|.|..|.... .
T Consensus 119 ~~~~g~~v~l~C~~~g~p~p-~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~ 197 (212)
T 2yd6_A 119 VVERTRTATMLCAASGNPDP-EITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAP 197 (212)
T ss_dssp EEETTSCEEEEEEEECSSCC-EEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCC
T ss_pred eEecCCCEEEEEEecCCCCC-eEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccccc
Confidence 67889999999999999888 899999874322111112222 2234568999999999999999999999998765 3
Q ss_pred EEEEEE
Q psy11549 147 CLYQVV 152 (261)
Q Consensus 147 ~~~~v~ 152 (261)
+.+.+.
T Consensus 198 a~l~~~ 203 (212)
T 2yd6_A 198 ANLYVR 203 (212)
T ss_dssp EEEEEE
T ss_pred ccEEEE
Confidence 344444
No 78
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.85 E-value=3.6e-20 Score=131.46 Aligned_cols=134 Identities=20% Similarity=0.271 Sum_probs=103.2
Q ss_pred CCCCeeccCCCCceEEEEC----CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCc
Q psy11549 1 MAGGIPLAHNTSARIILSN----QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~----~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 76 (261)
+|||.++...........+ ++|.|.+++.+|+|.|+|.+.+..+...+..+.|.|..+|.+...... ..+..|+.
T Consensus 37 ~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~ 115 (182)
T 1rhf_A 37 VKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKD-LAVPPNAP 115 (182)
T ss_dssp EETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCC-EEECTTCC
T ss_pred EECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcc-eEecCCCE
Confidence 4788888654333333333 589999999999999999999987765567899999999987765554 67889999
Q ss_pred EEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 77 VDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 77 ~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+.|.|.+.+.|.|..+.|++++.. +... .. ....|.|.++ +|+|.|+|.|.|..|....
T Consensus 116 ~~l~C~~~g~p~p~~v~W~~~~~~--~~~~--~~----~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s 174 (182)
T 1rhf_A 116 FQLSCEAVGPPEPVTIVWWRGTTK--IGGP--AP----SPSVLNVTGV--TQSTMFSCEAHNLKGLASS 174 (182)
T ss_dssp EEEEEEEECSSSCCEEEEEETTEE--CSCS--EE----SSEEEEECCC--SSCEEEEEEEEETTEEEEC
T ss_pred EEEEeEecCCCCCCEEEEEcCCeE--CCCC--CC----CceEEEEecc--ccCeEEEEEEECCCCCccc
Confidence 999999999887768999998742 2111 10 3447888887 5899999999999887753
No 79
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.85 E-value=3.7e-20 Score=134.85 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=98.6
Q ss_pred CCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe--eceeecCceeEEEeeCCCcEEEE
Q psy11549 3 GGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY--APICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 3 ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~--~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
||..+... .+.....++.|.|.+++.+|+|.|+|.|.|..+...+..+.|.|.. +|.+.......+.+..|++++|.
T Consensus 48 ~g~~~~~~-~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~ 126 (213)
T 2x1w_L 48 EKRFVPDG-NRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLN 126 (213)
T ss_dssp TEEECCCS-SSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEE
T ss_pred CCccccCC-CcccccCCccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEE
Confidence 57776533 3344445678999999999999999999886555445457777753 33333222222578899999999
Q ss_pred EEEeeCCC-CceeEEEEcCCccccccC-CceEEe------CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 81 CAVEADPP-ARSFKWKFNNSGETLDVG-SERFSS------GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 81 C~~~~~~~-~~~~~W~~~~~~~~~~~~-~~~~~~------~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
|.+.+.|. +..+.|++++........ ...... ....+.|.|.++..+|+|.|+|.|.|..|..... +.+.
T Consensus 127 C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~--~~l~ 204 (213)
T 2x1w_L 127 CTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNS--TFVR 204 (213)
T ss_dssp EEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEE--EEEE
T ss_pred EEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEE--EEEE
Confidence 99998654 337999988753111100 001000 1123479999999999999999999999887664 4444
Q ss_pred eCCCC
Q psy11549 153 LAGKP 157 (261)
Q Consensus 153 ~~~~p 157 (261)
|..+|
T Consensus 205 V~~~p 209 (213)
T 2x1w_L 205 VHEDP 209 (213)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 44444
No 80
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.85 E-value=1.2e-20 Score=136.00 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=92.6
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCc
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSG 100 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~ 100 (261)
+|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.+...+.. ..+.+|+.+.|.|.+.+.|.| .+.|++++..
T Consensus 70 ~L~I~~v~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~p~~~~~~~~~-~~v~~g~~~~l~C~~~G~P~P-~v~W~~~~~~ 146 (203)
T 4fa8_A 70 FLVVTAANISHDGNYLCRMKLGETEV-TKQEHLSVVKPLTLSVHSER-SQFPDFSVLTVTCTVNAFPHP-HVQWLMPEGV 146 (203)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEEEEEEEEEEEE-CCSSCSCCEEEEEEEEEESCC-EEEECCC---
T ss_pred EEEEccCCHHHCeEEEEEEEcCCCcE-EEEEEEEecCCceeeeccee-EEEcCCCEEEEEEEcCCCCCC-EEEEEECCee
Confidence 79999999999999999999998887 66789999888876654443 667899999999999999988 8999886543
Q ss_pred cccc-cCCceEEe--CCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 101 ETLD-VGSERFSS--GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 101 ~~~~-~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
...+ ....++.. ++....+.+.++..+|+|.|+|.|.|..|....
T Consensus 147 ~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 147 EPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ---------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred ecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 2221 12233333 333345667799999999999999999998765
No 81
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.85 E-value=3.8e-19 Score=151.94 Aligned_cols=222 Identities=13% Similarity=0.108 Sum_probs=152.7
Q ss_pred eEEEccCCC-CCCEeEEEEEEeCCCcceeeeEEEEEE---eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeE-EE
Q psy11549 21 SLVLQKVSR-QSAGTYKCSAINTKGEATSNQLKLRVK---YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFK-WK 95 (261)
Q Consensus 21 ~L~i~~~~~-~D~G~Y~C~~~~~~~~~~s~~~~l~V~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~-W~ 95 (261)
.+.|..+.. +..+.|.|.+.+..|......+.+.+. .+|.+..+. . +.+..|+.+.|.|.+.+.|.| .+. |+
T Consensus 124 ~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~~~~-~-~~v~~G~~v~l~C~~~g~P~p-~i~~W~ 200 (731)
T 2v5y_A 124 ELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQ-N-VEVNAGQFATFQCSAIGRTVA-GDRLWL 200 (731)
T ss_dssp EEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEECCCC-C-EEEETTSCEEEEEEEESCCCT-TCEEEE
T ss_pred EEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccccccc-c-eEEeCCCcEEEEEEeCCCCCC-ceeEEE
Confidence 466665523 335889998888777653333333332 345555332 3 778899999999999999988 566 87
Q ss_pred EcCCccccccCCce-EEeCCceeEEEEecCCCCcCeEEEEEEEcCCce-EEeeEEEEEEeCCCCCCCCcceEEeecCCeE
Q psy11549 96 FNNSGETLDVGSER-FSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGT-QVTPCLYQVVLAGKPQPPQNCSVRNETTSSV 173 (261)
Q Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~-~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~ 173 (261)
+..++..+...... +........|.|.++...|.|.|+|.|.|..|. .... ..+.+..+|.+|....+.......+
T Consensus 201 ~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~--~~l~V~~~P~~~~~p~~~~~~~~~v 278 (731)
T 2v5y_A 201 QGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNY--AELVVKEPPVPIAPPQLASVGATYL 278 (731)
T ss_dssp EESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCC--EEEEEECCCCBSSCCEEEEECSSCE
T ss_pred ecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceee--EEEEEecCCCCCCCcceeccCCceE
Confidence 32222222211111 111122458999999999999999999999987 4443 3455557777777666766778999
Q ss_pred EEEeecCC-CCCCCe-EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEE--cCCCcCCceeeeeeee
Q psy11549 174 HISCTPGY-DGGLPQ-TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGV--NAKGRSLPVIWDDFSM 249 (261)
Q Consensus 174 ~l~c~~~~-~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~--N~~G~~~~s~~~~~~~ 249 (261)
.|.|.++. .++.|+ .|.+.|+...... ..........+.|.+ |.+++.|+|+|.|. |..|.+.+|..+.+.+
T Consensus 279 ~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t 354 (731)
T 2v5y_A 279 WIQLNANSINGDGPIVAREVEYCTASGSW--NDRQPVDSTSYKIGH--LDPDTEYEISVLLTRPGEGGTGSPGPALRTRT 354 (731)
T ss_dssp EEECCCSSBSSCSCCCEEEEEEEESSSSC--EEEEECCSSEEEECS--CCTTCEEEEEEEEECSSTTCSCCBCCCEEEEC
T ss_pred EEEeCCcccCCCCccEEEEEEEEECCCCc--eEEeccCcceEEEeC--CCCCCEEEEEEEEEecCCCccccCCCcEEeee
Confidence 99999643 344554 5888888754332 123334458899999 99999999999999 9999999998877765
Q ss_pred cc
Q psy11549 250 SG 251 (261)
Q Consensus 250 ~~ 251 (261)
..
T Consensus 355 ~~ 356 (731)
T 2v5y_A 355 KC 356 (731)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 82
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.85 E-value=1.1e-19 Score=138.44 Aligned_cols=149 Identities=22% Similarity=0.355 Sum_probs=113.6
Q ss_pred CCCCeeccCC-CCceEEEECCeEEEccCCCCCCEeEEEEEEeCC-CcceeeeEEEEEEeeceeecCc-eeEEEeeCCCcE
Q psy11549 1 MAGGIPLAHN-TSARIILSNQSLVLQKVSRQSAGTYKCSAINTK-GEATSNQLKLRVKYAPICKSDR-IVIVGASRSESV 77 (261)
Q Consensus 1 ~~ng~~l~~~-~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~-~~~~s~~~~l~V~~~p~~~~~~-~~~~~~~~g~~~ 77 (261)
+|||.++... ..+.....+++|.|.+++.+|+|.|+|.+.|.. +...+..+.|.|..+|.+.... .....+..|+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v 214 (291)
T 1qz1_A 135 KHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSV 214 (291)
T ss_dssp EETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCE
T ss_pred EECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceE
Confidence 4678887543 345566677899999999999999999999875 4444567888888888776443 223568899999
Q ss_pred EEEEEEeeCCCCceeEEEEcCCccccccCC---ceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 78 DIHCAVEADPPARSFKWKFNNSGETLDVGS---ERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 78 ~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~---~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
.|.|.+.+.|.| .+.|++++.. +.... .++........|.|.++..+|+|.|+|.|.|..|.......+.|.
T Consensus 215 ~l~C~~~g~p~p-~i~W~~~g~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 215 TLVCDADGFPEP-TMSWTKDGEP--IENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EEEEEEEEESCC-EEEEEETTEE--CCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEeCCC-cEEEEECCEE--CcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 999999998888 8999998742 22221 245555555689999999999999999999999987775555443
No 83
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.84 E-value=8.9e-20 Score=135.23 Aligned_cols=155 Identities=23% Similarity=0.331 Sum_probs=104.9
Q ss_pred CCCCeeccCCCC---ceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee----ceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTS---ARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA----PICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~---~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~----p~~~~~~~~~~~~~~ 73 (261)
+|||+++..... ......+.+|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|... |...........+..
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 128 (241)
T 3grw_A 50 LKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSI-RQTYTLDVLERSPHRPILQAGLPANQTAVL 128 (241)
T ss_dssp EETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCCCCCEEEECTTCSEECCT
T ss_pred EECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCce-EEEEEEEEeccCCCCceeecCCCccceecC
Confidence 478888864322 2334455699999999999999999999988776 56678888752 222222222256788
Q ss_pred CCcEEEEEEEeeCCCCceeEEEE----cCCccccccCCce-EE--------eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 74 SESVDIHCAVEADPPARSFKWKF----NNSGETLDVGSER-FS--------SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~----~~~~~~~~~~~~~-~~--------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
|+.+.|.|.+.+.|.+ .+.|++ ++.. +...... .. .......|.|.++..+|+|.|+|.|.|..
T Consensus 129 g~~v~L~C~~~~~p~p-~v~W~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~ 205 (241)
T 3grw_A 129 GSDVEFHCKVYSDAQP-HIQWLKHVEVNGSK--VGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFI 205 (241)
T ss_dssp TCCEEEEEEEECSSCC-EEEEEEECCSSSCS--SCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CCEEEEEEEEecCCCC-EEEEEEcccCCCcc--cCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCc
Confidence 9999999999999888 899998 5432 2111111 11 11234579999999999999999999999
Q ss_pred ceEEeeEEEEEEeCCCCCCCC
Q psy11549 141 GTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 141 ~~~~~~~~~~v~~~~~p~~p~ 161 (261)
|.... .+.+.|..+|.+|.
T Consensus 206 g~~~~--~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 206 GVAEK--AFWLSVHGPRAAEE 224 (241)
T ss_dssp CEEEE--EEEEEC--------
T ss_pred ceEEE--EEEEEecCCCCCCc
Confidence 88866 56666767776554
No 84
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.84 E-value=2.6e-20 Score=135.49 Aligned_cols=129 Identities=18% Similarity=0.311 Sum_probs=97.4
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEE-eeCCCCceeEEEEc
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAV-EADPPARSFKWKFN 97 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~W~~~ 97 (261)
+.+|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|..+|........ ..+..|+.+.|.|.+ .+.|.+ .+.|+++
T Consensus 83 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~-~v~W~~~ 159 (214)
T 3jz7_A 83 DASINVTNLQLSDIGTYQCKVKKAPGVA-NKKFLLTVLVKPSGTRCFVD-GSEEIGNDFKLKCEPKEGSLPL-QFEWQKL 159 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCBSCEEEEE-SCCBTTCCEEEEEECSBCCSSC-EEEEEEC
T ss_pred cccEEEccCChhhCeEEEEEEEeCCCcc-ccEEEEEEEcCCCCceeeee-cceecCCcEEEEecCCCCCCCC-EEEEEEC
Confidence 4689999999999999999999988766 67789999887765433322 346789999999999 677777 8999996
Q ss_pred CCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCC
Q psy11549 98 NSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAG 155 (261)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 155 (261)
+....+... ... ......|.|.++..+|+|.|+|.|.|..|.... .+.+.|..
T Consensus 160 ~~~~~~~~~-~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~--~~~l~V~~ 212 (214)
T 3jz7_A 160 SDSQTMPTP-WLA--EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQC--MLRLDVVP 212 (214)
T ss_dssp STTCCCCGG-GGG--GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEE--EEEECCBC
T ss_pred CCCCccCcc-cee--ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEE--EEEEEEeC
Confidence 543332211 111 112237999999999999999999999988866 45555543
No 85
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.84 E-value=2.5e-20 Score=134.69 Aligned_cols=138 Identities=12% Similarity=0.156 Sum_probs=95.8
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
||||++|... .++|.|.+++.+|+|.|+|.+.|.. .+..+.|.|..+|.+..... ..+.+|+.+.|.
T Consensus 43 ~k~g~~l~~~--------~~~L~i~~v~~~D~G~Y~C~a~n~~---~s~~~~l~V~~~p~~~~~~~--~~v~~G~~v~L~ 109 (204)
T 3sgj_C 43 FHNESLISSQ--------ASSYFIDAATVDDSGEYRCQTQLST---LSDPVQLEVHIGWLLLQAPR--WVFKEEDPIHLR 109 (204)
T ss_dssp EETTEEESCC--------SSEEEESSCCGGGCEEEEEEETTSB---CCCCEEEEEECSSEEEECSC--SEEETTCCEEEE
T ss_pred EECCEEcccC--------ccEEEEecccccCCEEEEEEeCCCc---ccccEEEEEecCceEecCCc--eeEeCCCcEEEE
Confidence 3566666432 2789999999999999999998742 24567888887776554433 456789999999
Q ss_pred EEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCC
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPP 160 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p 160 (261)
|.+.+.++...+.|++++..... ......|.|.++..+|+|.|+|.|.|..+.. .+..+.+.|..+|..|
T Consensus 110 C~~~~~~p~~~v~W~k~g~~~~~---------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~-~s~~~~l~V~~~~~~P 179 (204)
T 3sgj_C 110 CHSWKNTALHKVTYLQNGKGRKY---------FHHNSDFYIPKATLKDSGSYFCRGLVGSKNV-SSETVQITITQGLAVS 179 (204)
T ss_dssp EEEGGGCCCEEEEEEETTEEEEE---------EEECCCEEESSCCGGGCEEEEEEEEETTEEE-ECCCEEEEEEC-----
T ss_pred EEecCCCCCceEEEEECCcEeec---------ccCCceEEECcCCcccCEEEEEEEEeCCCce-ecCcEEEEEeCcCCCC
Confidence 99977766448999998742111 1123369999999999999999999954432 3335666666666665
Q ss_pred C
Q psy11549 161 Q 161 (261)
Q Consensus 161 ~ 161 (261)
.
T Consensus 180 ~ 180 (204)
T 3sgj_C 180 T 180 (204)
T ss_dssp -
T ss_pred c
Confidence 4
No 86
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.84 E-value=8.3e-20 Score=139.19 Aligned_cols=152 Identities=14% Similarity=0.205 Sum_probs=109.8
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCCCE-eEEEEEEeCCCcceeeeEEEEEE----eeceeecCceeEEEeeCCCc
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQSAG-TYKCSAINTKGEATSNQLKLRVK----YAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y~C~~~~~~~~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~ 76 (261)
+||++|.. ..+.....++.|.|.+++.+|+| .|+|.|.|..+...+..+.|.|. .+|.+...... ..+..|+.
T Consensus 128 ~~g~~l~~-~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~-~~v~~G~~ 205 (290)
T 2o26_X 128 CDGKSLPT-DLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETS-HLLKKGDT 205 (290)
T ss_dssp TTSCCCCT-TCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSB-CCCCTTCC
T ss_pred CCCcCCCC-CCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCc-ceEecCCc
Confidence 68888864 34445555689999999999999 99999999866654556888887 66777554444 47889999
Q ss_pred EEEEEEEeeCCCCceeEEEEcCCcc---ccccCCceEE---eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 77 VDIHCAVEADPPARSFKWKFNNSGE---TLDVGSERFS---SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 77 ~~l~C~~~~~~~~~~~~W~~~~~~~---~~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
+.|.|.+.+.|.|..+.|++++... ........+. .......|.|.++..+|+|.|+|.|.|..|.... .+.
T Consensus 206 v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~--~~~ 283 (290)
T 2o26_X 206 FTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANV--TTT 283 (290)
T ss_dssp EEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEE--EEE
T ss_pred EEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEE--EEE
Confidence 9999999999888559999987531 0111111111 1123458999999999999999999999998866 455
Q ss_pred EEeCCCC
Q psy11549 151 VVLAGKP 157 (261)
Q Consensus 151 v~~~~~p 157 (261)
|.|..+|
T Consensus 284 l~V~~~P 290 (290)
T 2o26_X 284 LKVVEKG 290 (290)
T ss_dssp ECC----
T ss_pred EEEEeCC
Confidence 5555443
No 87
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.84 E-value=1.3e-19 Score=133.35 Aligned_cols=155 Identities=22% Similarity=0.321 Sum_probs=107.0
Q ss_pred CCCCeeccCCCC---ceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee----ceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTS---ARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA----PICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~---~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~----p~~~~~~~~~~~~~~ 73 (261)
+|||+++..... ......+.+|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|... |...........+..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~ 132 (231)
T 3ojm_B 54 LKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSI-NHTYHLDVVERSRHRPILQAGLPANASTVV 132 (231)
T ss_dssp EETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEECCCCCCCEECTTCSCCEEEET
T ss_pred EECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcc-cccEEEEEEcCCCCCCceeeccCCceEEEe
Confidence 478888864322 1333445689999999999999999999988776 56778888753 333322222367889
Q ss_pred CCcEEEEEEEeeCCCCceeEEEE----cCCccccccCCce-EE-------eCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 74 SESVDIHCAVEADPPARSFKWKF----NNSGETLDVGSER-FS-------SGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~----~~~~~~~~~~~~~-~~-------~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
|+.+.|.|.+.+.|.+ .+.|++ ++. .+...... .. .......|.|.++..+|+|.|+|.|.|..|
T Consensus 133 g~~~~l~C~~~~~p~p-~v~W~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 209 (231)
T 3ojm_B 133 GGDVEFVCKVYSDAQP-HIQWIKHVEKNGS--KYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIG 209 (231)
T ss_dssp TCCEEEECCEECSSCC-EEEEEEECCBTTB--SBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCcEEEEEEEecCCCC-EEEEEECCCCCCc--cccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccc
Confidence 9999999999998888 899998 442 12111111 10 112234699999999999999999999998
Q ss_pred eEEeeEEEEEEeCCCCCCCC
Q psy11549 142 TQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 142 ~~~~~~~~~v~~~~~p~~p~ 161 (261)
.... .+.+.+..+|.+|.
T Consensus 210 ~~~~--~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 210 QANQ--SAWLTVLPKQQAPG 227 (231)
T ss_dssp EEEE--EEEEEEECCC----
T ss_pred eEee--EEEEEEecCCCCCc
Confidence 8766 45566667777664
No 88
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.84 E-value=6.1e-20 Score=131.35 Aligned_cols=179 Identities=21% Similarity=0.313 Sum_probs=117.9
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
.+|.+...... +.+..|+.+.|.|.+.+.|.+ .+.|++++. .+.....++........|.|.++..+|+|.|+|.+
T Consensus 6 ~~P~i~~~~~~-~~~~~G~~v~l~C~~~~~p~~-~i~W~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (192)
T 2iep_A 6 KAPVITTPLET-VDALVEEVATFMCAVESYPQP-EISWTRNKI--LIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTA 81 (192)
T ss_dssp EEEEESSCCCE-EEEETTSCEEEECCEEEESCC-EEEEEETTE--ECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEE
T ss_pred CCceeecCccc-eeeeCCCcEEEEeeCCCCCCC-eEEEEECCE--EccccCccEEEcCCccEEEEcCCCcccCeEEEEEE
Confidence 45666655544 778899999999999998887 899999774 23233344444444457999999999999999999
Q ss_pred EcCCceE-EeeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCc
Q psy11549 137 QNAIGTQ-VTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPA 212 (261)
Q Consensus 137 ~~~~~~~-~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (261)
.+..+.. .....+.+. .+|. .|....+ ..|..+.|.|.+ .+..+..+. |++..................
T Consensus 82 ~~~~~~~~~~~~~l~v~--~~p~~~~~~~~~~~--~~g~~~~l~C~~--~g~p~~~v~-W~~~~~~~~~~~~~~~~~~~~ 154 (192)
T 2iep_A 82 NNGVGGAVESCGALQVK--MKPKITRPPINVKI--IEGLKAVLPCTT--MGNPKPSVS-WIKGDSALRENSRIAVLESGS 154 (192)
T ss_dssp ECSSSCCEEEEEEEEEE--EEEEEEECCCCEEE--ETTSCEEECCEE--EEESCCEEE-EEETTEECCCCSSEEECTTSC
T ss_pred EcCCCceeEeEEEEEEE--eCCccccCCcceEE--eCCCcEEEEEEE--eccCCceEE-EEeCCEEccCCCcEEEecCCc
Confidence 9987763 333334333 3332 3333333 469999999997 333333444 444432221111112223468
Q ss_pred EEEcCCCCCCccEEEEEEEEEcCCCcCC-ceeeeeee
Q psy11549 213 FTLEDLGLDGTVLMRVVISGVNAKGRSL-PVIWDDFS 248 (261)
Q Consensus 213 ~~i~~~~l~~~~~Y~~~~~a~N~~G~~~-~s~~~~~~ 248 (261)
+.|.+++..|.|.| +|.|.|..|... .+..+.+.
T Consensus 155 L~i~~~~~~d~G~Y--~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 155 LRIHNVQKEDAGQY--RCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp EEESSCCGGGCEEE--EEEEEETTEEEECCCEEEEEE
T ss_pred EEEecCChhhCEEE--EEEEEcCCCcEEEEEEEEEEE
Confidence 99999999999999 999999999763 34444444
No 89
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.83 E-value=4.3e-20 Score=134.17 Aligned_cols=139 Identities=22% Similarity=0.403 Sum_probs=101.7
Q ss_pred eEEEECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEE-EeeCCCCce
Q psy11549 14 RIILSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCA-VEADPPARS 91 (261)
Q Consensus 14 ~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~~~~~~~~ 91 (261)
+....+++|.|.+++.+|+|.|+|.+.+..|. ..+..+.|.|..+|........ ..+..|+.+.|.|. +.+.|.+ .
T Consensus 59 r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~-~ 136 (212)
T 1f97_A 59 RVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVP-SSVTIGNRAVLTCSEHDGSPPS-E 136 (212)
T ss_dssp TEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECC-SEEETTSCEEEEEECSCCBSCC-E
T ss_pred cEEeeceeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCc-cccCCCCeEEEEEEcccCcCCC-E
Confidence 45556689999999999999999999998763 2356788888887765433222 45779999999999 6777777 8
Q ss_pred eEEEEcCC-ccccccC------CceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeC
Q psy11549 92 FKWKFNNS-GETLDVG------SERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLA 154 (261)
Q Consensus 92 ~~W~~~~~-~~~~~~~------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 154 (261)
+.|++++. ....... ...+........|.|.++..+|.|.|+|.|.|..|....+..+.+.+.
T Consensus 137 i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 137 YSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp EEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred EEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 99999874 3221111 123344444567999999999999999999999988744435555543
No 90
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.83 E-value=3.8e-19 Score=127.74 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=118.8
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE---eCCceeEEEEecCCCCcCeEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS---SGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++. ..+....|.|.++..+|+|.|+|
T Consensus 4 ~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 4 APHFKEELRN-LNVRYQSNATLVCKVTGHPKP-IVKWYRQGKE--IIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCEEEECCCC-EEEETTSCEEEEEEEECSSCC-EEEEEETTEE--CCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCEEEEcCCc-cEEcCCCEEEEEEEEeecCCC-EEEEEECCEE--CccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 4455444443 678899999999999988877 8999998743 222222322 23445589999999999999999
Q ss_pred EEEcCCceEEeeEEEEEEeCCCCCCCCc----ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeE-EEec
Q psy11549 135 AAQNAIGTQVTPCLYQVVLAGKPQPPQN----CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLV-NLTN 207 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v~~~~~p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~~~ 207 (261)
.+.+..+.......+.|........|.. ..+....|..+.|.|.+ . +.|.....|++...... ..+ ....
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~--~-g~p~p~i~W~~~~~~~~~~~~~~~~~~ 156 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPF--S-GKPDPVITWQKGQDLIDNNGHYQVIVT 156 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEE--E-EESCCEEEEEESSCEECSSSSCEEEEC
T ss_pred EEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEE--E-ecCCCcEEEEECCEEeecCCCEEEEEc
Confidence 9999888766654555543211112221 22344569999999997 3 33433334444432211 011 1122
Q ss_pred CCCCcEEEcC-CCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 208 LDTPAFTLED-LGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 208 ~~~~~~~i~~-~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.....+.|.+ +...|.|.| +|.|.|..|....+..+.+
T Consensus 157 ~~~~~L~i~~~~~~~d~G~Y--~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 157 RSFTSLVFPNGVERKDAGFY--VVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp SSEEEEECTTCCCGGGCEEE--EEEEEETTEEEEEEEEEEE
T ss_pred CCceEEEEeCCCCcccCEeE--EEEEEeCCCcEeEEEEEEE
Confidence 2346788888 999999999 9999999998766666555
No 91
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.83 E-value=5.6e-19 Score=126.75 Aligned_cols=184 Identities=15% Similarity=0.137 Sum_probs=120.7
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
.+|.+...... +.+..|+.+.|.|.+.+.|.+ .+.|++++.. ............+....|.|.++..+|+|.|+|.+
T Consensus 6 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 6 EAPGIRKEMKD-VTTKLGEAAQLSCQIVGRPLP-DIKWYRFGKE-LIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp EEEEEEECCCC-EEEETTSEEEEEEEEEEESCC-EEEEEETTEE-ECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCcccccCCc-eEEeCCCcEEEEEEEecCCCC-EEEEEECCEE-CCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 45665555444 678899999999999998877 8999998742 11222223344555668999999999999999999
Q ss_pred EcCCceEEeeEEEEEEeCC--CCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeE-EEecCCCC
Q psy11549 137 QNAIGTQVTPCLYQVVLAG--KPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLV-NLTNLDTP 211 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~~~~--~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~~~~~~~ 211 (261)
.+..+.......+.+.... .+..+....+....|..+.|.|.+ .+..+..+. |+++..... ... ........
T Consensus 83 ~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~--~~~p~p~v~-W~~~~~~~~~~~~~~~~~~~~~~ 159 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMY--IGRPVPAMT-WFHGQKLLQNSENITIENTEHYT 159 (197)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEE--EEESCCEEE-EEETTEECCCCSSEEEEECSSEE
T ss_pred ECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEE--eeeeCCeeE-EeECCEECCCCCceEEEEcCCEE
Confidence 9988877665455444211 111122233444569999999997 333334444 444322211 111 11122226
Q ss_pred cEEEcCCC-CCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 212 AFTLEDLG-LDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 212 ~~~i~~~~-l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.+.|.++. .++.|.| +|.|.|..|....+..+.+.
T Consensus 160 ~L~i~~~~~~~d~G~Y--~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 160 HLVMKNVQRKTHAGKY--KVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp EEEESSCCHHHHCEEE--EEEEECSSCEEEEEEEEEEE
T ss_pred EEEEccccchhhCceE--EEEEEcCcCceEEEEEEEEe
Confidence 78899966 3689999 99999999988777766664
No 92
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.83 E-value=1.2e-19 Score=135.72 Aligned_cols=202 Identities=12% Similarity=0.158 Sum_probs=103.8
Q ss_pred CCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCccc
Q psy11549 27 VSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP----ARSFKWKFNNSGET 102 (261)
Q Consensus 27 ~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~ 102 (261)
++.+|+|.|+|.|. |.. ...+.+.+..++.+...+.. +.+.+|++++|.|.+.+.++ ...+.|++...+..
T Consensus 11 v~~~dsg~Y~C~a~---g~~-~~~~~~~~~~~~~~~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~ 85 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYS-FTNYWMNWLRELVMTQSPLT-LSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQS 85 (254)
T ss_dssp -------------------------------CCCEEEECSE-EEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSC
T ss_pred ecCCccEEEEEcCc---hhh-hhhhhhheeeceeEEeCCce-EEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCC
Confidence 78899999999998 333 22334444445555443333 77889999999999998873 13899998543221
Q ss_pred cc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEe--
Q psy11549 103 LD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRN-- 167 (261)
Q Consensus 103 ~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~-- 167 (261)
.. ....++. .......|.|.++..+|+|.|+|.+.+..+..... ...+.+...+.+|. +.+..
T Consensus 86 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~-~~~l~V~~~~~~P~-v~~~~~~ 163 (254)
T 2c1o_A 86 PKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGA-GTKLELKRADAAPT-VSIFPPS 163 (254)
T ss_dssp CEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBC-CEEEEECCCCBCCE-EEEECCC
T ss_pred ceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecC-CEEEEECCCCCCCe-eEeecCC
Confidence 10 0112332 23345589999999999999999999875532221 11233333333332 22211
Q ss_pred ---ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee----EEEecCC------CCcEEEcCCCCCCccEEEEEEEEE
Q psy11549 168 ---ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL----VNLTNLD------TPAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 168 ---~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~----~~~~~~~------~~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
..+..++|.|.+ .+..|.. .+.|+++....... ....... ...|.|.++..+|+|.| +|.|.
T Consensus 164 ~~~~~g~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y--~C~a~ 239 (254)
T 2c1o_A 164 SEQLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSY--TCEAT 239 (254)
T ss_dssp HHHHHTTEEEEEEEE--EEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEE--EEEEE
T ss_pred hhhccCCcEEEEEEE--ecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeE--EEEEE
Confidence 236799999997 3333432 23444543322111 1111111 13678888777899999 99999
Q ss_pred cCCCcC
Q psy11549 234 NAKGRS 239 (261)
Q Consensus 234 N~~G~~ 239 (261)
|.....
T Consensus 240 n~~~~~ 245 (254)
T 2c1o_A 240 HKTSTS 245 (254)
T ss_dssp CTTCSS
T ss_pred cCCCCC
Confidence 998754
No 93
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.82 E-value=8.2e-19 Score=127.58 Aligned_cols=178 Identities=16% Similarity=0.164 Sum_probs=114.8
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE-e-CCceeEEEEecC-CCCcCeEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS-S-GSRGSMLRYTPV-TELDYGTLS 133 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~-~-~~~~~~l~i~~~-~~~d~g~y~ 133 (261)
.+|.+...+.. ..+.+|+.+.|.|.+.+.|.+ .+.|++++.. +........ . ......|.|.++ ..+|+|.|+
T Consensus 5 ~~P~~~~~p~~-~~v~~G~~v~L~C~~~g~p~~-~v~W~k~~~~--~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 80 (212)
T 2yd6_A 5 TPPRFTRTPVD-QTGVSGGVASFICQATGDPRP-KIVWNKKGKK--VSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYE 80 (212)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEEEEESCC-EEEEEETTEE--CCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEE
T ss_pred CCCeEEeCcce-eEEecCCeEEEEEEEeeCCCC-EEEEEECCcC--CCCCceeEEEEcCCCceEEEEeccCCCCCCeEEE
Confidence 45666655444 678899999999999988887 8999998742 222221111 1 234567999999 599999999
Q ss_pred EEEEcCCceEEeeEEEEEEeC--CCCCCCCc----ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc-----ee
Q psy11549 134 CAAQNAIGTQVTPCLYQVVLA--GKPQPPQN----CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN-----LL 202 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~~~--~~p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~-----~~ 202 (261)
|.+.|..|.......+.|... .++..|.. .......|+.+.|.|.+ . +.|.....|++...... ..
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~--~-g~p~p~v~W~~~g~~l~~~~~~~~ 157 (212)
T 2yd6_A 81 CVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAA--S-GNPDPEITWFKDFLPVDTSNNNGR 157 (212)
T ss_dssp EEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEE--E-CSSCCEEEEEETTEEC------CC
T ss_pred EEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEe--c-CCCCCeEEEEECCccccCcCCCce
Confidence 999999887666545544432 11222211 11223468999999997 3 33433344444432211 01
Q ss_pred E-EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCcee
Q psy11549 203 V-NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVI 243 (261)
Q Consensus 203 ~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~ 243 (261)
. .........|.|.+++.+|.|.| +|.|.|.+|....+.
T Consensus 158 ~~~~~~~~~~~L~i~~~~~~d~G~Y--~C~a~N~~G~~~s~~ 197 (212)
T 2yd6_A 158 IKQLRSESIGALQIEQSEESDQGKY--ECVATNSAGTRYSAP 197 (212)
T ss_dssp EEEEEETTEEEEEECSCCGGGCEEE--EEEEEETTEEEECCC
T ss_pred EEEEecCCeEEEEEcCCCcccCEEE--EEEEECCCCcccccc
Confidence 1 11223347899999999999999 999999999665443
No 94
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.82 E-value=2.1e-19 Score=136.94 Aligned_cols=147 Identities=17% Similarity=0.318 Sum_probs=108.8
Q ss_pred CCCCeeccC-CCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEeeceeecCcee-EEEeeCCCcE
Q psy11549 1 MAGGIPLAH-NTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKYAPICKSDRIV-IVGASRSESV 77 (261)
Q Consensus 1 ~~ng~~l~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~~p~~~~~~~~-~~~~~~g~~~ 77 (261)
+|||.++.. ...+.....+++|.|.+++.+|+|.|+|.+.|..+. .....+.|.|..+|.+...... ...+..|+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~ 212 (291)
T 2wim_A 133 LYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEM 212 (291)
T ss_dssp ECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEE
T ss_pred EECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeE
Confidence 467777763 344556667789999999999999999999998744 3456678888888876654422 2457789999
Q ss_pred EEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 78 DIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 78 ~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
.|.|.+.+.|.+ .+.|++++. .+. ...++........|.|.++..+|+|.|+|.|.|..|.....+.+.+
T Consensus 213 ~l~C~~~g~p~p-~v~W~~~g~--~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v 282 (291)
T 2wim_A 213 TFSCRASGSPEP-AISWFRNGK--LIE-ENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 282 (291)
T ss_dssp EEECBCCCBSCC-EEEEEETTE--ECC-CTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEeecCCCC-eEEEEECCE--ECc-CCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEE
Confidence 999999998888 899999874 222 2234444444568999999999999999999999998888544443
No 95
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.82 E-value=4.5e-19 Score=128.92 Aligned_cols=182 Identities=17% Similarity=0.210 Sum_probs=117.8
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE---eCCceeEEEEecCCC-CcCeEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS---SGSRGSMLRYTPVTE-LDYGTLS 133 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~-~d~g~y~ 133 (261)
+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++. ..+....|.|.++.. +|+|.|+
T Consensus 6 pP~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~-~v~W~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 6 PPEIIRKPQN-QGVRVGGVASFYCAARGDPPP-SIVWRKNGKK--VSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCEEEECCCC-EEEETTSCEEEEEEEECSSCC-EEEEEETTEE--CCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCEEEcCCCc-eEEecCCEEEEEEEEccCCCC-eEEEEECCEE--CCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 4555554444 678899999999999998887 8999998743 222233332 234446899999999 9999999
Q ss_pred EEEEcCCce-EEeeEEEEEEeCCC--CCCCCc----ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc---eeE
Q psy11549 134 CAAQNAIGT-QVTPCLYQVVLAGK--PQPPQN----CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN---LLV 203 (261)
Q Consensus 134 C~~~~~~~~-~~~~~~~~v~~~~~--p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~---~~~ 203 (261)
|.+.|..+. ......+.|..... +..|.. .......|..+.|.|.+ .+..+.. +.|++...... ...
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~--~g~p~p~-i~W~~~~~~~~~~~~~~ 158 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKA--IGNPTPN-IYWIKNQTKVDMSNPRY 158 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEE--ECSSCCE-EEEEETTEECCTTSTTE
T ss_pred EEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEe--ccCCCCe-EEEEECCeEcccCCCeE
Confidence 999998887 45544444443211 111211 11223469999999997 3333334 44444432211 011
Q ss_pred EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCce-eeeeeeecc
Q psy11549 204 NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPV-IWDDFSMSG 251 (261)
Q Consensus 204 ~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s-~~~~~~~~~ 251 (261)
.. ....|.|.+++..|.|.| +|.|.|..|..... ..+.|....
T Consensus 159 ~~---~~~~L~i~~v~~~d~G~Y--~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 159 SL---KDGFLQIENSREEDQGKY--ECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EE---ETTEEEECSCCGGGCEEE--EEEEEETTEEEECCCEEEEEEC--
T ss_pred Ec---cCCeEEEccCChhhCEEE--EEEeecCCCceeEEEEEEEEEecc
Confidence 11 135899999999999999 99999999987654 566665443
No 96
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.82 E-value=3.3e-19 Score=130.28 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=100.0
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee---------------ceeecCc
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA---------------PICKSDR 65 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~---------------p~~~~~~ 65 (261)
+|||.++... .+++|.|.+++.+|+|.|+|.+.|..+...+..+.|.|... |.+....
T Consensus 53 ~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~ 125 (218)
T 3k0w_A 53 FKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP 125 (218)
T ss_dssp EETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC
T ss_pred EECCEECCCC-------CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECC
Confidence 3566666432 24689999999999999999999998876566788888765 3333333
Q ss_pred eeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 66 IVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 66 ~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +... ....|.|.++..+|+|.|+|.|.|..|....
T Consensus 126 ~~-~~v~~G~~v~L~C~~~g~p~~-~v~W~~~~~~--~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s 193 (218)
T 3k0w_A 126 TS-QKLMPGSTLVLQCVAVGSPIP-HYQWFKNELP--LTHE--------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDS 193 (218)
T ss_dssp CC-EEECTTCCEEEECEEEBSSCC-EEEEEETTEE--CTTC--------CSSEEEESSCCGGGCEEEEEEEECSSCEEEC
T ss_pred Cc-eeecCCCcEEEEEEecccCCC-eEEEEECCEE--CCCC--------CCCEEEEeecChhcCEEEEEEEEcCCCCcee
Confidence 33 568899999999999998888 8999997742 2111 1237999999999999999999998876433
Q ss_pred eEEEEEEeCC
Q psy11549 146 PCLYQVVLAG 155 (261)
Q Consensus 146 ~~~~~v~~~~ 155 (261)
. .+.+.+..
T Consensus 194 ~-~~~l~V~~ 202 (218)
T 3k0w_A 194 K-KVEIIIDE 202 (218)
T ss_dssp C-CEEEEECC
T ss_pred e-eEEEEEeC
Confidence 2 34444433
No 97
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.82 E-value=4.1e-19 Score=127.25 Aligned_cols=182 Identities=14% Similarity=0.098 Sum_probs=119.1
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-CCceEEeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-GSERFSSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
.+|.+...+.. ..+.+|+.+.|.|.+.+.|.+ .+.|++++....... ...++........|.|.++..+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 4 QAPTFTQPLQS-VVVLEGSTATFEAHISGFPVP-EVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEEEEESCC-EEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCc-eEEECCCEEEEEEEEEecCCC-EEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 34555544444 678899999999999998877 899999875322111 123344455567899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeC-CCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeEE-EecC
Q psy11549 136 AQNAIGTQVTPCLYQVVLA-GKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLVN-LTNL 208 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~-~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~~-~~~~ 208 (261)
+.+..+.......+.+... .+|. .+.. +....|..+.|.|.+ .+..+..+ .|+++..... .... ....
T Consensus 82 ~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~--~~~~~g~~~~l~C~~--~g~p~~~v-~W~~~~~~~~~~~~~~~~~~~ 156 (194)
T 2a38_A 82 ATNGSGQATSTAELLVKAETAPPNFVQRLQS--MTVRQGSQVRLQVRV--TGIPTPVV-KFYRDGAEIQSSLDFQISQEG 156 (194)
T ss_dssp EEETTEEEEEEEEEEEECCCEEEEEEECCCC--EEECTTEEEEEEEEE--EEESCCEE-EEEETTEECCCSSSEEEEEET
T ss_pred EEcCCceEeEEEEEEEccCCCCCEEEeCCcc--EEEcCCCEEEEEEEE--EEecCCeE-EEEECCEECCCCCcEEEEEcC
Confidence 9998887666544444421 1221 2222 333568999999997 33333444 4444432211 1111 1122
Q ss_pred CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 209 DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 209 ~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
....+.|.+++..|.|.| +|.|.|..|....+..+.|
T Consensus 157 ~~~~L~i~~~~~~d~G~Y--~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 157 DLYSLLIAEAYPEDSGTY--SVNATNSVGRATSTAELLV 193 (194)
T ss_dssp TEEEEEEEEECGGGCEEE--EEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEECCCChhcCeEE--EEEEEeCCCceEEEEEEEE
Confidence 223688999888999999 9999999998766665554
No 98
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.82 E-value=4e-18 Score=131.96 Aligned_cols=232 Identities=14% Similarity=0.150 Sum_probs=140.8
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEE
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C 81 (261)
|||..+.. ...+....+++|.|.+++..|+|.|+|.+ .|.. ...+.|.|..+|.... . .-...+....+.|
T Consensus 43 ~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~---~g~~-~~~~~L~V~~pP~~P~--l--~c~~~~~~~~~~c 113 (325)
T 1n26_A 43 LRKPAAGS-HPSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRP-AGTVHLLVDVPPEEPQ--L--SCFRKSPLSNVVC 113 (325)
T ss_dssp EECSSSSC-CCEEEEEESSEEEECSCCGGGCEEEEEES---SSSC-SCEEEEEECCCCCCCC--C--EEEBSSTTSCEEE
T ss_pred ECCccCCc-cccccccccceEEecccchhhCeEeEEEe---CCEE-eeeEEEEeccCCCCCc--e--eEEeecCCCcEEE
Confidence 45555421 22344556789999999999999999993 4554 5568999988775322 1 1111333335556
Q ss_pred EEeeCC---CCce--eEEEEc-CCccccccCCceEE--eCCceeEEEEecCC-CCcCeEEEEEEEcCCceEEe-eEEEEE
Q psy11549 82 AVEADP---PARS--FKWKFN-NSGETLDVGSERFS--SGSRGSMLRYTPVT-ELDYGTLSCAAQNAIGTQVT-PCLYQV 151 (261)
Q Consensus 82 ~~~~~~---~~~~--~~W~~~-~~~~~~~~~~~~~~--~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~-~~~~~v 151 (261)
...... .+.. +.+.+. +.. .... ..... .........+..+. ....+.|+|.|.|..|.... ...+.+
T Consensus 114 ~W~~~~~~~~~~~y~l~~~~~~~~~-~~~~-~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~s~~~~~~~ 191 (325)
T 1n26_A 114 EWGPRSTPSLTTKAVLLVRKFQNSP-AEDF-QEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFSKTQTFQG 191 (325)
T ss_dssp EECCSSCCCTTCEEEEEEEEESSSS-CEEE-EEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEECCCEEEET
T ss_pred EECCCCCCCCCceEEEEEEEccCCC-CCcc-cccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcccCcEEEee
Confidence 544221 1212 222221 110 0000 00010 11223456666654 44667889999999987643 223333
Q ss_pred EeCCCCCCCCcceEEeecC--CeEEEEeecCCC--CCCC-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 152 VLAGKPQPPQNCSVRNETT--SSVHISCTPGYD--GGLP-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~--~~~~l~c~~~~~--~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
....+|.+|.++.+....+ ..+.|+|.++.. .+.+ ..|.+.|+..................+.|.+ |.++..|
T Consensus 192 ~~~v~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~~~~~~~~~l~~--L~p~t~Y 269 (325)
T 1n26_A 192 CGILQPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMVKDLQHHCVIHD--AWSGLRH 269 (325)
T ss_dssp TTCBCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEECGGGCSEEEESS--CCTTCCE
T ss_pred ccccCCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcccCCceEEEEeC--CCCCCeE
Confidence 3346788999888876543 589999998654 2333 6699999887554211111223457899999 9999999
Q ss_pred EEEEEEEcCCCcCCceeeee
Q psy11549 227 RVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 227 ~~~~~a~N~~G~~~~s~~~~ 246 (261)
+|+|+|.|..|.+.+|.+.+
T Consensus 270 ~~rVrA~n~~g~G~~S~wS~ 289 (325)
T 1n26_A 270 VVQLRAQEEFGQGEWSEWSP 289 (325)
T ss_dssp EEEEEEEETTTBSCCCCCCC
T ss_pred EEEEEEecCCCCCCCcCCCC
Confidence 99999999999777776654
No 99
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.82 E-value=5.2e-19 Score=136.35 Aligned_cols=147 Identities=15% Similarity=0.254 Sum_probs=105.1
Q ss_pred CCCCeeccCCCCceEEEECC--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe--------------------e
Q psy11549 1 MAGGIPLAHNTSARIILSNQ--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY--------------------A 58 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~--------------------~ 58 (261)
+|||+++..+........++ +|.|.+++.+|+|.|+|.|.|..|.. ...+.|.|.. .
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~ 221 (317)
T 2y25_A 143 SHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH-QKTVDLSGQAYDEAYAEFQRLKQAAIAEKNR 221 (317)
T ss_dssp EESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEE-EEEEEECHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred EECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceE-EEEEEEeeeeccccchhhcccCCcccCcCCC
Confidence 47888886544323322332 49999999999999999999988776 4556665431 1
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEe--C-CceeEEEEecCCCCcCeEEEEE
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSS--G-SRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~-~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
|.+.........+..|+.+.|.|.+.+.|.+ .+.|++++.. +.. ..++.. . +..+.|.|.++..+|+|.|+|.
T Consensus 222 p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p-~i~W~~~g~~--~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 297 (317)
T 2y25_A 222 ARVLGGLPDVVTIQEGKALNLTCNVWGDPPP-EVSWLKNEKA--LAS-DDHCNLKFEAGRTAYFTINGVSTADSGKYGLV 297 (317)
T ss_dssp CEEEEBCCSEEEEETTSBBCEEEEEECSSCC-EEEEEESSSE--ECC-CSSEEECCBTTTEEEEEEBSCCSTTCEEEEEE
T ss_pred CcccccCCccEEEEcCCEEEEEEEEecCCCC-EEEEEECCEe--CCC-CCcEEEEEcCCCEEEEEECCCCHHHCEEEEEE
Confidence 2233222223678899999999999999888 8999998742 222 222322 2 4456899999999999999999
Q ss_pred EEcCCceEEeeEEEEEE
Q psy11549 136 AQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~ 152 (261)
|.|..|.......+.|.
T Consensus 298 a~N~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 298 VKNKYGSETSDFTVSVF 314 (317)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999988775555554
No 100
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.82 E-value=5.6e-19 Score=127.16 Aligned_cols=144 Identities=17% Similarity=0.262 Sum_probs=101.8
Q ss_pred CCCCeeccC--CCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCccee--eeEEEEEE-------eeceeecCceeEE
Q psy11549 1 MAGGIPLAH--NTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATS--NQLKLRVK-------YAPICKSDRIVIV 69 (261)
Q Consensus 1 ~~ng~~l~~--~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s--~~~~l~V~-------~~p~~~~~~~~~~ 69 (261)
+|||.++.. +..+.....+++|.|.+++.+|+|.|+|.+.+..+.... ..+.+.+. .+|.+...... .
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~ 123 (201)
T 3s97_C 45 LLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD-V 123 (201)
T ss_dssp EESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCC-E
T ss_pred EECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCc-e
Confidence 467777752 233334445679999999999999999999987655422 23444443 34444433332 6
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+..|+.+.|.|.+.+.|.+ .+.|++++.. +. ....+... ...|.|.++..+|+|.|+|.|.|..|.......+
T Consensus 124 ~~~~g~~~~l~C~~~g~p~p-~v~W~~~~~~--~~-~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 197 (201)
T 3s97_C 124 YALMGQNVTLECFALGNPVP-DIRWRKVLEP--MP-STAEISTS--GAVLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197 (201)
T ss_dssp EEETTCCEEEEEEEEEESCC-EEEEEETTBC--CC-TTCEEETT--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCCcEEEEEEccCCCCC-ceEEEeCCCc--CC-CceeecCC--CCEEEEccCChhhCEEEEEEEEecCCceeeeEEE
Confidence 78899999999999998888 8999998742 21 12222222 3479999999999999999999999988775555
Q ss_pred EE
Q psy11549 150 QV 151 (261)
Q Consensus 150 ~v 151 (261)
.|
T Consensus 198 ~V 199 (201)
T 3s97_C 198 YV 199 (201)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 101
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.82 E-value=3.5e-19 Score=129.39 Aligned_cols=152 Identities=26% Similarity=0.379 Sum_probs=103.9
Q ss_pred CCCCeeccCCC----CceEEEECCeEEE-----ccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEe
Q psy11549 1 MAGGIPLAHNT----SARIILSNQSLVL-----QKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGA 71 (261)
Q Consensus 1 ~~ng~~l~~~~----~~~~~~~~~~L~i-----~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~ 71 (261)
+|||.++.... ..+....++.+.+ .+++.+|+|.|+|.+.|..|...+..+.|.|...|...........+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~ 123 (212)
T 2v9r_A 44 YKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMV 123 (212)
T ss_dssp EETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEE
T ss_pred EECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEe
Confidence 46788875322 2244445555544 45699999999999999887765567788887654333222222668
Q ss_pred eCCCcEEEEEEE-eeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 72 SRSESVDIHCAV-EADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 72 ~~g~~~~l~C~~-~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
..|+.+.|.|.+ .+.|.+ .+.|++++. .+.....++...+. .|.|.++..+|+|.|+|.|.|..|..... .+.
T Consensus 124 ~~g~~~~l~C~~~~~~p~~-~v~W~~~~~--~l~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~-~~~ 197 (212)
T 2v9r_A 124 AVGEPAVMECQPPRGHPEP-TISWKKDGS--PLDDKDERITIRGG--KLMITYTRKSDAGKYVCVGTNMVGERESE-VAE 197 (212)
T ss_dssp ETTSCEEEECBCCCEESCC-EEEEEETTE--EECTTSTTEEEETT--EEEESSCCGGGCEEEEEEEEETTEEEECC-CEE
T ss_pred cCCCcEEEEEecCCCCCCC-EEEEEECCc--cCCCCcceEEccCC--eEEEeeCCHhhCeeEEEEEecccCceecc-eEE
Confidence 899999999998 787877 899999874 23233333333333 79999999999999999999998876542 244
Q ss_pred EEeCCCCC
Q psy11549 151 VVLAGKPQ 158 (261)
Q Consensus 151 v~~~~~p~ 158 (261)
+.|..+|.
T Consensus 198 l~V~~~P~ 205 (212)
T 2v9r_A 198 LTVLERPS 205 (212)
T ss_dssp EEEEC---
T ss_pred EEEEeCch
Confidence 55555554
No 102
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.82 E-value=4.4e-19 Score=126.50 Aligned_cols=172 Identities=14% Similarity=0.221 Sum_probs=112.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+.+|+.+.|.|.+.+.|.+ .+.|++++.... .....++..... ..|.|.++..+|+|.|+|.+.+..+.......
T Consensus 12 ~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~~~-~~~~~~~~~~~~-~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~ 88 (189)
T 2v5t_A 12 QEFKQGEDAEVVCRVSSSPAP-AVSWLYHNEEVT-TISDNRFAMLAN-NNLQILNINKSDEGIYRCEGRVEARGEIDFRD 88 (189)
T ss_dssp EEEETTSCEEECCEEECSSCC-EEEEEC-----C-BCCCTTEEECTT-SCEEETTCCGGGCEEEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCC-EEEEEECCccce-eccCCeEEEecC-CCEEEeeCCHhHCcEEEEEEEEcCCCceEEEE
Confidence 567899999999999988777 899998874322 223334443332 36999999999999999999988654443334
Q ss_pred EEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcccee-EEEecCCCCcEEEcCCCCCCcc
Q psy11549 149 YQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLL-VNLTNLDTPAFTLEDLGLDGTV 224 (261)
Q Consensus 149 ~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~~ 224 (261)
+.+.+..+|. .+.........|..+.|.|.+ .+..+..+ .|+++....... ..........+.|.++..+|.|
T Consensus 89 ~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~--~g~p~~~v-~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 165 (189)
T 2v5t_A 89 IIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA--SGSPEPAI-SWFRNGKLIEENEKYILKGSNTELTVRNIINSDGG 165 (189)
T ss_dssp EEEEEEEEEEEECSCCEEEEETTSCCCEEEECEE--EEESCCEE-EEEETTEECCCSSSEEEETTTTEEEECSCCGGGCE
T ss_pred EEEEecCCCCcccccccccccccCCCcEEEEEEE--ccCCCCeE-EEEECCEECcCCCcEEEecCCCEEEEcCCChhhCe
Confidence 4444444443 222223344569999999997 33323334 444443221111 1112233578999999999999
Q ss_pred EEEEEEEEEcCCCcCCceeeeeee
Q psy11549 225 LMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 225 ~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.| +|.|.|..|....+..+.+.
T Consensus 166 ~Y--~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 166 PY--VCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EE--EEEEEETTEEEEEEEEEEEE
T ss_pred eE--EEEEEeCCCceeEEEEEEEE
Confidence 99 99999999988877777664
No 103
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.81 E-value=3e-19 Score=128.26 Aligned_cols=170 Identities=14% Similarity=0.089 Sum_probs=108.6
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+..|++++|.|.+.+ +.+ .+.|++++.... ..............|.|.++..+|+|.|+|.+.|..+....+..+
T Consensus 15 ~v~~G~~v~L~C~~~~-~~~-~~~w~k~g~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 90 (196)
T 3p2t_A 15 VISWGNSVTIWCQGTL-EAR-EYRLDKEESPAP--WDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPL 90 (196)
T ss_dssp EEETTCCEEEEEECCT-TCC-EEEEEETTSCSC--SEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCE
T ss_pred cCCCCCcEEEEeeCCC-CCC-EEEEEECCCCCc--ccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccE
Confidence 4679999999999988 445 899999875322 111111112345689999999999999999999988743333344
Q ss_pred EEEeCCCCCCCCcce---EEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce---eE-EEecCCCCcEEEcCCCCCC
Q psy11549 150 QVVLAGKPQPPQNCS---VRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL---LV-NLTNLDTPAFTLEDLGLDG 222 (261)
Q Consensus 150 ~v~~~~~p~~p~~~~---v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~i~~~~l~~ 222 (261)
.+.+...+.+|.... .....|+.++|.|.+ . +.+..+.| +++...... .. .........|.|.+++.+|
T Consensus 91 ~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~--~-~~~~~~~w-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 166 (196)
T 3p2t_A 91 ELVMTGAYSKPTLSALPSPLVTSGKSVTLLCQS--R-SPMDTFLL-CKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVH 166 (196)
T ss_dssp EEEEECSSCCCEEEEESCSEECTTCCEEEEEEE--E-EEEEEEEE-EETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGG
T ss_pred EEEecCCCCCCEEEeCCcceecCCCeEEEEEec--C-CCCCEEEE-EeCCCcccceeecccccccCcceEEEeCCCcccC
Confidence 555544333332110 022469999999997 2 33444544 444332211 11 1111234679999999999
Q ss_pred ccEEEEEEEEEcCCC---cCCceeeeeeee
Q psy11549 223 TVLMRVVISGVNAKG---RSLPVIWDDFSM 249 (261)
Q Consensus 223 ~~~Y~~~~~a~N~~G---~~~~s~~~~~~~ 249 (261)
+|.| +|.|.|..+ .+..|..+.+..
T Consensus 167 ~G~Y--~C~a~n~~~~~~~s~~S~~~~l~V 194 (196)
T 3p2t_A 167 GGTY--RCFSSHGFSHYLLSHPSDPLELIV 194 (196)
T ss_dssp CEEE--EEEEECGGGTTEECCCCCCEEEEE
T ss_pred CCeE--EEEEEcCCCCcccCCCCCCEEEEe
Confidence 9999 999999987 456666665543
No 104
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.81 E-value=5.8e-19 Score=127.87 Aligned_cols=139 Identities=22% Similarity=0.417 Sum_probs=100.2
Q ss_pred CceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee---ceeecCceeEEEeeCCCcEEEEEEEeeCCC
Q psy11549 12 SARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA---PICKSDRIVIVGASRSESVDIHCAVEADPP 88 (261)
Q Consensus 12 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 88 (261)
.+.....+++|.|.+++.+|+|.|+|.+.+..+...+..+.|.|..+ |.+..... . +..|+.+.|.|.+.+.|
T Consensus 63 ~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~-~~~g~~v~l~C~~~~~p- 138 (208)
T 3r4d_A 63 GREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNT--T-VKELDSVTLTCLSNDIG- 138 (208)
T ss_dssp SSEEECTTSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCS--S-CCTTCCEEEEEECSCTT-
T ss_pred ceeEEecCCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCc--e-EeeCCCEEEEEECCCCC-
Confidence 34555566799999999999999999999986555467788888755 33332222 1 67899999999999865
Q ss_pred CceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 89 ARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
+ .+.|++++.. +.. ..++........|.|.++..+|+|.|+|.|.|..|..... .+++.+..+|..
T Consensus 139 p-~i~W~~~g~~--l~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~-~~~l~v~~~~~~ 204 (208)
T 3r4d_A 139 A-NIQWLFNSQS--LQL-TERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSN-SIKLDIIFDPHH 204 (208)
T ss_dssp C-EEEEEETTEE--CCC-CSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECC-CEEECCC-----
T ss_pred C-ceEEEECCEe--CCC-CCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCC-ceeeeEEeCCcc
Confidence 5 8999997742 222 2333433333579999999999999999999999886654 677777666543
No 105
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.81 E-value=1.9e-18 Score=127.10 Aligned_cols=190 Identities=13% Similarity=0.160 Sum_probs=121.2
Q ss_pred eeceeecCc---eeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEE
Q psy11549 57 YAPICKSDR---IVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLS 133 (261)
Q Consensus 57 ~~p~~~~~~---~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~ 133 (261)
.+|.+.... .....+..|+.+.|.|.+.+.|.+ .+.|++++....................|.|.++..+|+|.|+
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMP-TMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 92 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCC-EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCC-eEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEE
Confidence 455554333 123678899999999999998887 8999998743221111111233334457999999999999999
Q ss_pred EEEEcCCceEEeeEEEEEEeCCCCC------CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc-------c
Q psy11549 134 CAAQNAIGTQVTPCLYQVVLAGKPQ------PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL-------N 200 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~~~~~p~------~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~-------~ 200 (261)
|.+.+..+.......+.+....... .|.. +....|..+.|.|.+ .+..+..+.|++.....+ .
T Consensus 93 C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~--~~~~~g~~~~l~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~ 168 (231)
T 3ojm_B 93 CVVENEYGSINHTYHLDVVERSRHRPILQAGLPAN--ASTVVGGDVEFVCKV--YSDAQPHIQWIKHVEKNGSKYGPDGL 168 (231)
T ss_dssp EEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCC--EEEETTCCEEEECCE--ECSSCCEEEEEEECCBTTBSBCTTSC
T ss_pred EEEecccCcccccEEEEEEcCCCCCCceeeccCCc--eEEEeCCcEEEEEEE--ecCCCCEEEEEECCCCCCccccCCCc
Confidence 9999988877665455554321111 1222 333569999999997 333334444443211110 0
Q ss_pred eeE-EE-----ecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeecccc
Q psy11549 201 LLV-NL-----TNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGAH 253 (261)
Q Consensus 201 ~~~-~~-----~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~~ 253 (261)
... .. .......|.|.++...|.|.| +|.|.|..|....+..+.+..++..
T Consensus 169 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y--~C~a~n~~g~~~~~~~l~V~~~p~~ 225 (231)
T 3ojm_B 169 PYLKVLKHSGINSSNAEVLALFNVTEADAGEY--ICKVSNYIGQANQSAWLTVLPKQQA 225 (231)
T ss_dssp BCEEEEEECSTTCSCTTEEEECSCCGGGCEEE--EEEEEETTEEEEEEEEEEEECCC--
T ss_pred ceEeEecccccccCCccEEEEecCCHHHCeEE--EEEEEeccceEeeEEEEEEecCCCC
Confidence 000 00 112335699999999999999 9999999999877777777655433
No 106
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.81 E-value=8.4e-18 Score=119.90 Aligned_cols=169 Identities=13% Similarity=0.111 Sum_probs=110.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.|. .+.|++++...........+...+....|.|.++..+|+|.|+|.+.+..+.... ..
T Consensus 12 ~~v~~G~~v~L~C~~~~~p~--~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~-~~ 88 (189)
T 2v44_A 12 VELSVGESKFFTCTAIGEPE--SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQE-AT 88 (189)
T ss_dssp EEEETTCCEEEEEEEEECCS--EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEE-EE
T ss_pred eEEecCCcEEEEEEeecCCe--eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEE-EE
Confidence 66789999999999998865 7999983322222122222333444568999999999999999999998776532 24
Q ss_pred EEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEecCCCCcEEEcCCCCCCc
Q psy11549 149 YQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTNLDTPAFTLEDLGLDGT 223 (261)
Q Consensus 149 ~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~l~~~ 223 (261)
+.+.+..+|. .+.... ...|+.+.|.|.+ .+..++.+. |++....... ...........|.|.+++.+|.
T Consensus 89 ~~l~v~~~p~~~~~~~~~~--~~~g~~~~l~C~~--~g~p~p~v~-W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 163 (189)
T 2v44_A 89 VVLEIYQKLTFREVVSPQE--FKQGEDAEVVCRV--SSSPAPAVS-WLYHNEEVTTISDNRFAMLANNNLQILNINKSDE 163 (189)
T ss_dssp EEEEEECCCEEESCCCSEE--EETTSCEEECCEE--ECSSCCEEE-EEEEC--CEECCCTTEEECTTSCEEETTCCGGGC
T ss_pred EEEEEecCCceeecCCcEE--EeCCCCEEEEEEE--CcCCCCcEE-EEECCcEEeccCCCCEEEecCCcEEEEEcCcccC
Confidence 5555555553 233333 3569999999997 333334444 4444332210 0011222346899999999999
Q ss_pred cEEEEEEEEEcCCCcCCceeeeee
Q psy11549 224 VLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
|.| +|.|.|..|....+..+.+
T Consensus 164 G~Y--~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 164 GIY--RCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEE--EEEEEETTTTEEEEEEEEE
T ss_pred eEE--EEEEEccccCceeeeeEEE
Confidence 999 9999999986655544443
No 107
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.81 E-value=7.1e-18 Score=120.45 Aligned_cols=174 Identities=10% Similarity=0.097 Sum_probs=112.8
Q ss_pred eceeecCceeEEEeeC-CCcEEEEEEEeeCCC-CceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 58 APICKSDRIVIVGASR-SESVDIHCAVEADPP-ARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~-g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+|.+..+.. ..+.+ |+.+.|.|.+.+.+. +..+.|++++.. +... .... ....|.|.++..+|+|.|+|.
T Consensus 3 ~P~i~~~~~--~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~--~~~~--~~~~--~~~~L~i~~~~~~d~G~Y~C~ 74 (190)
T 2wv3_A 3 EPRIVTSEE--VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVE--LTAT--RKNA--SNMEYRINKPRAEDSGEYHCV 74 (190)
T ss_dssp CCEEEECCC--EECCCSSSCEEEEEEEEECSSCEEEEEEEETTEE--CTTC--CBCC--SEEEEEESSCCGGGCEEEEEE
T ss_pred CCcccccce--EEEccCCceEEEEEEeccCCCCceEEEEEECCEE--Cccc--ceEe--ccEEEEEecCCcccCEEEEEE
Confidence 455544332 33445 999999999998886 238999998742 2111 1111 345899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc------ceeEEE-
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL------NLLVNL- 205 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~------~~~~~~- 205 (261)
+.+. +..... +.+.+..+|. .+.. .....|..+.|.|.+ .+..+..+.|.....+.. ...+..
T Consensus 75 ~~n~-~~~~~~--~~l~V~~~p~~~~~~~~--~~~~~g~~v~l~C~~--~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~ 147 (190)
T 2wv3_A 75 YHFV-SAPKAN--ATIEVKAAPDITGHKRS--ENKNEGQDAMMYCKS--VGYPHPEWMWRKKENGVFEEISNSSGRFFII 147 (190)
T ss_dssp EEET-TEEEEE--EEEEEECCCEEEEECSE--EEEETTSCEEEEEEE--ECSSCCEEEEEEEETTEEEECCCTTSCEEEE
T ss_pred EEeC-Cccccc--EEEEEecCCcccccCCc--ceeeCCCcEEEEEEe--CccCCCceEEEEcCCCceeeeecCCCeEEEe
Confidence 9998 666554 4444445553 2222 233569999999997 333334454443222211 111211
Q ss_pred ecCCCCcEEEcCCCC-CCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 206 TNLDTPAFTLEDLGL-DGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 206 ~~~~~~~~~i~~~~l-~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.......|.|.++.+ +|.|.| +|.|.|..|....+..+.++
T Consensus 148 ~~~~~~~L~i~~~~~~~d~G~Y--~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 148 NKENYTELNIVNLQITEDPGEY--ECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECSSEEEEEECSCCTTTSCEEE--EEEEECSSCEEEEEEEEEEE
T ss_pred cCCCeeEEEEEeccccCCCEEE--EEEEEecCCcceeEEEEEEE
Confidence 112224799999994 999999 99999999988777777664
No 108
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.81 E-value=1.8e-18 Score=133.28 Aligned_cols=147 Identities=16% Similarity=0.245 Sum_probs=107.9
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEE-eCCCccee--eeEEEEEE-----eeceeecCceeEEEee
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAI-NTKGEATS--NQLKLRVK-----YAPICKSDRIVIVGAS 72 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~-~~~~~~~s--~~~~l~V~-----~~p~~~~~~~~~~~~~ 72 (261)
+|||+++..+.. +....+++|.|.+++.+|+|.|+|.|. |..|...+ ..+.|.+. .+|.+..+....+.+.
T Consensus 144 ~k~~~~l~~~~~-~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~ 222 (315)
T 1itb_B 144 YKDCKPLLLDNI-HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 222 (315)
T ss_dssp EETTEECCCCSS-SEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECC
T ss_pred EECCEECCCccc-eEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEe
Confidence 478888875443 456678899999999999999999999 77777532 34444444 5666665554436788
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC-----ceEEeCC--------ceeEEEEecCCCCc-CeEEEEEEEc
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS-----ERFSSGS--------RGSMLRYTPVTELD-YGTLSCAAQN 138 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-----~~~~~~~--------~~~~l~i~~~~~~d-~g~y~C~~~~ 138 (261)
.|+.+.|.|.+.+.|.| .+.|++++.. +.... ..+.... ..+.|.|.++..+| +|.|+|.|.|
T Consensus 223 ~g~~v~l~C~~~g~P~p-~i~W~~~g~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N 299 (315)
T 1itb_B 223 LGSQIQLICNVTGQLSD-IAYWKWNGSV--IDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN 299 (315)
T ss_dssp SSSCEEEEEEEEECTTS-EEEEEETTEE--CCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEEC
T ss_pred CCCcEEEEEEEecCCCC-eeEEEECCEE--CCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEec
Confidence 99999999999999888 8999998742 22211 1111111 23479999999999 9999999999
Q ss_pred CCceEEeeEEEEE
Q psy11549 139 AIGTQVTPCLYQV 151 (261)
Q Consensus 139 ~~~~~~~~~~~~v 151 (261)
..|.......+.+
T Consensus 300 ~~G~~~~~~~l~v 312 (315)
T 1itb_B 300 THGIDAAYIQLIY 312 (315)
T ss_dssp TTCCEEEEEEEEC
T ss_pred CCCceeEEEEEEe
Confidence 9998887544443
No 109
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.81 E-value=7.3e-20 Score=131.53 Aligned_cols=137 Identities=15% Similarity=0.224 Sum_probs=92.9
Q ss_pred CCCCeeccCCCCceE-EEECCeEEEccCCCCCCEeEEEEEEeCCC-cceeeeEEEEEEe---eceeecCceeEEEeeCCC
Q psy11549 1 MAGGIPLAHNTSARI-ILSNQSLVLQKVSRQSAGTYKCSAINTKG-EATSNQLKLRVKY---APICKSDRIVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~-~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~ 75 (261)
+|||.++........ ...+++|.|.+++.+|+|.|+|.|.|..+ ...+..+.|.|.. +|.+..... ..+..|+
T Consensus 38 ~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~--~~v~~G~ 115 (196)
T 3p2t_A 38 DKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPS--PLVTSGK 115 (196)
T ss_dssp EETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESC--SEECTTC
T ss_pred EECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCc--ceecCCC
Confidence 467777753211111 02346899999999999999999999987 3336677888864 333332222 2467999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
.++|.|.+.+.+ + .+.|++++....................|.|.++..+|+|.|+|.|.|..+
T Consensus 116 ~v~L~C~~~~~~-~-~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 116 SVTLLCQSRSPM-D-TFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CEEEEEEEEEEE-E-EEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred eEEEEEecCCCC-C-EEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 999999998743 3 799999875322211111111223345799999999999999999999865
No 110
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.81 E-value=4.4e-18 Score=132.04 Aligned_cols=146 Identities=16% Similarity=0.166 Sum_probs=105.0
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeC--CCcc---eeeeEEEEEEeec----eeecCceeEEEe
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINT--KGEA---TSNQLKLRVKYAP----ICKSDRIVIVGA 71 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~--~~~~---~s~~~~l~V~~~p----~~~~~~~~~~~~ 71 (261)
+|||+++..+..+... .+++|.|.+++.+|+|.|+|.|.|. .|.. .+..+.|.|..+| ... .+.. ..+
T Consensus 164 ~k~~~~l~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~-~~v 240 (329)
T 3oq3_B 164 YKNNQELIIDGTKYSQ-SGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPK-INV 240 (329)
T ss_dssp EETTEECCCSSSSEEE-ETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSE-EEE
T ss_pred EECCccCCCCCceEec-CCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCe-eEE
Confidence 5789988654444444 4889999999999999999999986 5433 2334778887665 233 2333 678
Q ss_pred eCCCcEEEEEEEeeCC---CCceeEEEEcCCccccccCCceEEe---C--CceeEEEEecCCCCcCe-EEEEEEEcCCce
Q psy11549 72 SRSESVDIHCAVEADP---PARSFKWKFNNSGETLDVGSERFSS---G--SRGSMLRYTPVTELDYG-TLSCAAQNAIGT 142 (261)
Q Consensus 72 ~~g~~~~l~C~~~~~~---~~~~~~W~~~~~~~~~~~~~~~~~~---~--~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~ 142 (261)
..|+.+.|.|.+.+.| ++..+.|++++... .......+.. . .....|.|.++..+|+| .|+|.|.|..|.
T Consensus 241 ~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i-~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~ 319 (329)
T 3oq3_B 241 TIGEPANITCTAVSTSLLVDDVLIDWENPSGWI-IGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFD 319 (329)
T ss_dssp CTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB-CCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCE
T ss_pred ecCCCEEEEEEEEECCCCCCCcEEEEEECCeee-eccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCc
Confidence 8999999999999998 34378999987531 1112111111 1 13557999999999999 999999999998
Q ss_pred EEeeEEEE
Q psy11549 143 QVTPCLYQ 150 (261)
Q Consensus 143 ~~~~~~~~ 150 (261)
......+.
T Consensus 320 ~~~~~~l~ 327 (329)
T 3oq3_B 320 KTLTTTVV 327 (329)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 87754444
No 111
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.81 E-value=1.2e-19 Score=127.96 Aligned_cols=117 Identities=18% Similarity=0.225 Sum_probs=87.2
Q ss_pred CCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCC
Q psy11549 11 TSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPA 89 (261)
Q Consensus 11 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 89 (261)
..+..+..+++|.|.+++.+|+|.|+|.+.|..|.. .+..+.|.|..++. .+ . + ...+..+.|.|.+.+.|+|
T Consensus 52 ~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~---~p-~-i-~~~~~~v~L~C~~~g~p~p 125 (176)
T 1hng_A 52 SGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVS---KP-M-I-YWECSNATLTCEVLEGTDV 125 (176)
T ss_dssp STTEEECTTSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCC---CC-E-E-EEETTTTEEEEECSSCSSC
T ss_pred CCeEEECCCCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCC---CC-E-E-EecCCcEEEEEEecCCCCc
Confidence 455666678899999999999999999999998875 45667788865431 11 1 1 1235579999999999987
Q ss_pred ceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee
Q psy11549 90 RSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 146 (261)
.+.|++++.. +.... .+.|.++..+|+|.|+|.|.|..|.....
T Consensus 126 -~i~W~~~g~~--l~~~~----------~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 169 (176)
T 1hng_A 126 -ELKLYQGKEH--LRSLR----------QKTMSYQWTNLRAPFKCKAVNRVSQESEM 169 (176)
T ss_dssp -EEEEEETTEE--EEEES----------SSEEEEECSCCSSCEEEEEEETTEEEEEE
T ss_pred -EEEEEECCEE--CCCCC----------cEEEEEEEccCCeEEEEEEEecCCCceec
Confidence 8999997732 21111 14455777999999999999999887764
No 112
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.81 E-value=1.2e-18 Score=127.10 Aligned_cols=188 Identities=15% Similarity=0.197 Sum_probs=116.5
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-CCceEEeCCcee--EEEEecCCCCcCeEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-GSERFSSGSRGS--MLRYTPVTELDYGTLS 133 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~--~l~i~~~~~~d~g~y~ 133 (261)
.+|.+...+.. +.+.+|+.+.|.|.+.+.|.+ .+.|++++....... ...++....... .+.|.++..+|+|.|+
T Consensus 8 ~~P~i~~~p~~-~~v~~G~~v~L~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~ 85 (217)
T 2vr9_A 8 QSPRIIEHPTD-LVVKKNEPATLNCKVEGKPEP-TIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYW 85 (217)
T ss_dssp CCCEEEECCCC-EEECTTSCEEECCEEECSSCC-EEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEE
T ss_pred CCCEEecCCCc-eEEeCCCcEEEEEEcCCCCCC-eEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEE
Confidence 34555544444 678899999999999988877 899999774322111 122233322221 2367889999999999
Q ss_pred EEEEcCCceEEe-eEEEEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--------e
Q psy11549 134 CAAQNAIGTQVT-PCLYQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--------L 202 (261)
Q Consensus 134 C~~~~~~~~~~~-~~~~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--------~ 202 (261)
|.+.+..|.... ...+.+.+..++. .|.. .....|+.+.|.|.+ ..+.|.....|++....... .
T Consensus 86 C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~--~~~~~g~~v~l~C~~--~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 161 (217)
T 2vr9_A 86 CVAKNRVGQAVSRHASLQIAVLRDDFRVEPKD--TRVAKGETALLECGP--PKGIPEPTLIWIKDGVPLDDLKAMSFGAS 161 (217)
T ss_dssp EEEEETTEEEECCCEEEEECEECCSCSBCCCC--EEECTTSCEEECCBC--CCEESCCEEEEEETTEEECCCCCC---CC
T ss_pred EEEecCCCccccccceEEEEEeCCCcEECCCc--cEEcCCCeEEEEEEC--CCCCCCCeEEEEECCcCCCcccccccccC
Confidence 999998876532 3344444322221 3333 333569999999986 34445433444444221110 0
Q ss_pred EEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccc
Q psy11549 203 VNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 203 ~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~ 252 (261)
..........|.|.+++..|.|.| +|.|.|..|....+..+.+....+
T Consensus 162 ~~~~~~~~~~L~i~~~~~~d~G~Y--~C~a~N~~G~~~~~~~~lv~~~~~ 209 (217)
T 2vr9_A 162 SRVRIVDGGNLLISNVEPIDEGNY--KCIAQNLVGTRESSYAKLIVQVKA 209 (217)
T ss_dssp CSEEEETTTEEEESSCCSTTCEEE--EEEEEETTEEEECCCEEEEEC---
T ss_pred CcEEecCCCcEEEeeCCHHHCeEE--EEEEEcccceeccccEEEEEEeeh
Confidence 011112346899999999999999 999999999887776665554433
No 113
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.81 E-value=3.6e-18 Score=131.01 Aligned_cols=167 Identities=16% Similarity=0.122 Sum_probs=120.8
Q ss_pred EEeeCCCcEEEEEEEeeC-------CCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 69 VGASRSESVDIHCAVEAD-------PPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~-------~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
..+..|++++|.|.+.+. +.+ .+.|++++. .+... ......+..+.|.|.++...+ |.|+|.|.+...
T Consensus 14 ~~v~~G~~v~l~C~~~~~~~~~~~~p~p-~i~W~~~g~--~i~~~-~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~g~ 88 (303)
T 1i1r_A 14 PVVQLHSNFTAVCVLKEKCMDYFHVNAN-YIVWKTNHF--TIPKE-QYTIINRTASSVTFTDIASLN-IQLTCNILTFGQ 88 (303)
T ss_dssp CEEETTCCEEEEEEECHHHHHHHTCCGG-GEEEEETTE--ECCGG-GCEEEETTEEEEEECSCCCSE-EEEEEEEEETTT
T ss_pred ceEeCCCCEEEEEEECCccccccCCChh-heEEEECCE--ECChh-heeeeCCcEEEEEEcCcCCCc-eEEEEecccCCC
Confidence 447799999999999863 445 899999874 22221 112234445689999999885 999999987532
Q ss_pred eEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCC-
Q psy11549 142 TQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGL- 220 (261)
Q Consensus 142 ~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l- 220 (261)
.........+.+..+|.+|.++.........+.|+|.++.+.+.+..|.+.++..................+.|.+ |
T Consensus 89 ~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~--L~ 166 (303)
T 1i1r_A 89 LEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDY--ST 166 (303)
T ss_dssp EEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEECCSSCTTEEECSS--CC
T ss_pred cceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCccCCCcCCCceEEEECC--cC
Confidence 3222234556677899999988877666789999999877766677899998765432111122233457899999 8
Q ss_pred CCccEEEEEEEEEcCCCcCCce
Q psy11549 221 DGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 221 ~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
.++..|.|+|.|.|.+|.+.++
T Consensus 167 ~p~t~Y~f~V~A~N~~G~~~s~ 188 (303)
T 1i1r_A 167 VYFVNIEVWVEAENALGKVTSD 188 (303)
T ss_dssp CTTSCEEEEEEEEETTEEEECC
T ss_pred cccccEEEEEEEEcCCCCcccC
Confidence 8999999999999999987643
No 114
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.81 E-value=1e-18 Score=124.86 Aligned_cols=179 Identities=16% Similarity=0.223 Sum_probs=116.0
Q ss_pred eceeecCc-eeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 58 APICKSDR-IVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 58 ~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+|.+.... ...+.+.+|+.+.|.|.+.+.|.+ .+.|++++.. +. ...++........|.|.++..+|+|.|+|.+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~--~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 77 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEP-AISWFRNGKL--IE-ENEKYILKGSNTELTVRNIINSDGGPYVCRA 77 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCC-EEEEEETTEE--CC-CSSSEEEETTTTEEEECSCCGGGCEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCC-eEEEEECCeE--cC-CCccEEEeCCeeEEEEecCChhcCcEEEEEE
Confidence 34444332 223678899999999999988877 8999998742 22 2234444444557999999999999999999
Q ss_pred EcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc---------ceeE-EEe
Q psy11549 137 QNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL---------NLLV-NLT 206 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~---------~~~~-~~~ 206 (261)
.+..+.......+.+ ..+|............|..+.|.|.+ .+..+..+. |++..... .... ...
T Consensus 78 ~~~~~~~~~~~~l~V--~~~p~~~~~~~~~~~~g~~v~l~C~~--~~~p~~~v~-W~~~~~~~~~~~~~~~~~~~~~~~~ 152 (192)
T 2va4_A 78 TNKAGEDEKQAFLQV--FVQPHIIQLKNETTYENGQVTLVCDA--EGEPIPEIT-WKRAVDGFTFTEGDKSLDGRIEVKG 152 (192)
T ss_dssp EETTEEEEEEEEEEE--EEEEEEEEECCEEECTTSEEEEEEEE--EEESCCEEE-EEETTTTEEECTTCBCTTSCEEEEE
T ss_pred EccccccceEEEEEE--EccCcccccCcceEEeCCeEEEEEEe--cCCCCCcEE-EEeCCCCceeeccccccCCcEEEee
Confidence 998877665444443 33333111111223459999999997 333333444 44431111 0011 111
Q ss_pred cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 207 NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 207 ~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
......|.|.+++.+|.|.| +|.|.|..|....+..+.|
T Consensus 153 ~~~~~~L~i~~~~~~d~G~Y--~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 153 QHGSSSLHIKDVKLSDSGRY--DCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp ETTEEEEEEESCCGGGCEEE--EEEEECSSCEEEEEEEEEE
T ss_pred ccCceEEEEecCCcccCEEE--EEEEEecCCceEEEEEEEe
Confidence 22336799999999999999 9999999998766665554
No 115
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.80 E-value=5.5e-18 Score=125.57 Aligned_cols=181 Identities=14% Similarity=0.173 Sum_probs=114.7
Q ss_pred EEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 68 IVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 68 ~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
.+.+.+|+.+.|.|.+.+.|.+ .+.|++++....................|.|.++..+|+|.|+|.+.+..+......
T Consensus 24 ~~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~ 102 (241)
T 3grw_A 24 LLAVPAANTVRFRCPAAGNPTP-SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTY 102 (241)
T ss_dssp EEEEETTSEEEEECCEECSSCC-EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ceEEcCCCeEEEEEEecCCCCc-eeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEE
Confidence 3778899999999999998877 899999875322211111223333445799999999999999999999888776654
Q ss_pred EEEEEeCCCCCCCC-----cceEEeecCCeEEEEeecCCCCCCCeEEEEEEE---eCCcc----ceeEE---E----ecC
Q psy11549 148 LYQVVLAGKPQPPQ-----NCSVRNETTSSVHISCTPGYDGGLPQTFTLELY---SASDL----NLLVN---L----TNL 208 (261)
Q Consensus 148 ~~~v~~~~~p~~p~-----~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~---~~~~~----~~~~~---~----~~~ 208 (261)
.+.+.... +.+|. ........|..+.|.|.+ .+..+..+.|.+. ..... ..... . ...
T Consensus 103 ~l~V~~~~-~~~~~~~~~~~~~~~~~~g~~v~L~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 179 (241)
T 3grw_A 103 TLDVLERS-PHRPILQAGLPANQTAVLGSDVEFHCKV--YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVE 179 (241)
T ss_dssp EEEEECCC-CCCCEEEECTTCSEECCTTCCEEEEEEE--ECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSE
T ss_pred EEEEeccC-CCCceeecCCCccceecCCCEEEEEEEE--ecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecC
Confidence 55554322 21121 112233569999999997 3333344555432 11110 00000 0 001
Q ss_pred CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccccc
Q psy11549 209 DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 209 ~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
....|.|.++...|.|.| +|.|.|..|....+..+.+..+++.+
T Consensus 180 ~~~~L~i~~~~~~d~G~Y--~C~a~N~~g~~~~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 180 ADVRLRLANVSERDGGEY--LCRATNFIGVAEKAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEEECSCCGGGCEEE--EEEEECSSCEEEEEEEEEC-------
T ss_pred CceEEEECcCCcccCcEE--EEEEecCcceEEEEEEEEecCCCCCC
Confidence 235689999999999999 99999999998888888776554443
No 116
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.80 E-value=6.3e-18 Score=122.67 Aligned_cols=174 Identities=14% Similarity=0.194 Sum_probs=113.7
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc---------ccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL---------DVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
+.+.+|+.+.|.|.+.+.|.+ .+.|++++..... .....++.... ..|.|.++..+|+|.|+|.+.+.
T Consensus 11 ~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~v~~~D~G~Y~C~~~~~ 87 (212)
T 1f97_A 11 VQVPENESIKLTCTYSGFSSP-RVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--SGITFSSVTRKDNGEYTCMVSEE 87 (212)
T ss_dssp EEEETTCCEEEECEEESCSSE-EEEEEEEETTEEEEEEETTEECGGGTTTEEEET--TEEEESCCCGGGCEEEEEEEEET
T ss_pred eEEEcCCCEEEEeEeCCCCCc-EEEEEECCCceeeEEecCCcccccccCcEEeec--eeEEEcccCcccCeEEEEEEEcc
Confidence 678899999999999987766 8999997743100 01122333333 47999999999999999999998
Q ss_pred CceEEeeEEEEEEeCCCCCCCCc-ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCC-ccceeE----------EEec
Q psy11549 140 IGTQVTPCLYQVVLAGKPQPPQN-CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSAS-DLNLLV----------NLTN 207 (261)
Q Consensus 140 ~~~~~~~~~~~v~~~~~p~~p~~-~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~-~~~~~~----------~~~~ 207 (261)
.|.......+.+.+..+|..+.. .......|+.+.|.|.. ..+.|..-..|++... ...... ....
T Consensus 88 ~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~--~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~ 165 (212)
T 1f97_A 88 GGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSE--HDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTID 165 (212)
T ss_dssp TSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEEC--SCCBSCCEEEEEETTEESBC-----CBSCSSSCEEEC
T ss_pred CCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEc--ccCcCCCEEEEEeCCcccccccccccccccCceeEec
Confidence 76333333555666566654321 11123469999999993 2444433334444433 221100 1122
Q ss_pred CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 208 LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 208 ~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
.....|.|.+++.+|.|.| +|.|.|..|....+..+.+..
T Consensus 166 ~~~~~L~i~~~~~~d~G~Y--~C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 166 PKSGDLIFDPVTAFDSGEY--YCQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp TTTCCEEESSCCGGGCEEE--EEEEECSSSCCEECCCEEEEE
T ss_pred CCCceEEEEecChhhCcEE--EEEEccccCCccccceEEEEE
Confidence 3457899999999999999 999999999885555554443
No 117
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.80 E-value=1e-19 Score=146.88 Aligned_cols=213 Identities=11% Similarity=0.058 Sum_probs=127.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCcee
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSF 92 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~ 92 (261)
.+|.|.+++.+|+|.|+|.+.|..+. .....+.|.|.. +|.+...... ..+..|+.+.|.|.+.+. |.+..+
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v 157 (444)
T 1igt_B 79 LYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTL 157 (444)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC-SSCCCSSCEEEEEEEEEEBSSCCEE
T ss_pred EEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEeccc-ccCCCCCcEEEEEEEcceeCCCcEE
Confidence 48999999999999999999987654 223446777763 3333211111 123689999999999986 555589
Q ss_pred EEEEcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE-------------eCCC
Q psy11549 93 KWKFNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV-------------LAGK 156 (261)
Q Consensus 93 ~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~-------------~~~~ 156 (261)
.|++++....... .......+ ..+.|.|.++..+| |.|+|.|.|..+.......+.+. +...
T Consensus 158 ~W~~~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (444)
T 1igt_B 158 TWNSGSLSSGVHT-FPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNL 235 (444)
T ss_dssp EEGGGTBCTTEEE-CCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCC
T ss_pred EEecCCCCCCeEe-cCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCccc
Confidence 9998764311100 00000011 12468899999889 99999999988765432222210 0011
Q ss_pred CCCCCcceEE-------eecCCeEEEEeecCCCCCC--Ce-EEEEEEEeCCccce---e-EEEec----CCCCcEEEcCC
Q psy11549 157 PQPPQNCSVR-------NETTSSVHISCTPGYDGGL--PQ-TFTLELYSASDLNL---L-VNLTN----LDTPAFTLEDL 218 (261)
Q Consensus 157 p~~p~~~~v~-------~~~~~~~~l~c~~~~~~~~--p~-~~~~~~~~~~~~~~---~-~~~~~----~~~~~~~i~~~ 218 (261)
..+|. +.+. ...|+.++|.|.+ .+.. |. ..+.|++....... . ..... .....|.|.++
T Consensus 236 ~~~p~-v~~~~p~~~~~~~~G~~~~L~C~~--~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 312 (444)
T 1igt_B 236 LGGPS-VFIFPPKIKDVLMISLSPIVTCVV--VDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQ 312 (444)
T ss_dssp CCCCE-EEEECCCHHHHHCTTSCCEEEEEE--EEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHH
T ss_pred CCCce-EEecCCchhheeecCCCcEEEEEE--eecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHH
Confidence 11121 1111 1459999999997 3332 32 23344444322110 0 01110 01246888888
Q ss_pred CCCCccEEEEEEEEEcCCCcCC
Q psy11549 219 GLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 219 ~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
+..|+|.| +|.|.|..|...
T Consensus 313 ~~~d~G~Y--~C~a~n~~~~~~ 332 (444)
T 1igt_B 313 DWMSGKEF--KCKVNNKDLPAP 332 (444)
T ss_dssp HHHTTCEE--EEEEECTTCSSC
T ss_pred HhccCCcE--EEEEEcCCCCCc
Confidence 88899999 999999999763
No 118
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.80 E-value=6.1e-20 Score=133.05 Aligned_cols=137 Identities=22% Similarity=0.397 Sum_probs=99.9
Q ss_pred eEEEECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEE-eeCCCCce
Q psy11549 14 RIILSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAV-EADPPARS 91 (261)
Q Consensus 14 ~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~ 91 (261)
+....+.+|.|.+++.+|+|.|+|.+.+..|. ..+..+.|.|..+|........ ..+..|+.+.|.|.+ .+.|.+ .
T Consensus 62 r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~-~ 139 (209)
T 1nbq_A 62 RVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIP-SSATIGNRAVLTCSEQDGSPPS-E 139 (209)
T ss_dssp TCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCB-SEEETTSCEEECCCCCSCBSCC-E
T ss_pred ceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccc-cceecCCEEEEEEeCCCCCCCc-e
Confidence 34445689999999999999999999998663 2356788888888876544333 457799999999997 777777 8
Q ss_pred eEEEEcCCccccccCC------ceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 92 FKWKFNNSGETLDVGS------ERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~------~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
+.|++++......... ..+........|.|.++..+|.|.|+|.|.|..|....+..+.+.
T Consensus 140 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~ 206 (209)
T 1nbq_A 140 YTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRME 206 (209)
T ss_dssp EEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCE
T ss_pred eEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEE
Confidence 9999987532211110 122333344579999999999999999999999887443344443
No 119
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.80 E-value=1.4e-18 Score=124.79 Aligned_cols=169 Identities=16% Similarity=0.133 Sum_probs=101.3
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+.+|++++|.|.+.+.+. .+.|++++..... .............|.|.++..+|+|.|+|.+.|..+....+..+
T Consensus 15 ~v~~G~~v~L~C~~~~~~~--~~~W~k~g~~~~~--~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 90 (196)
T 2d3v_A 15 VISRGNSVTIRCQGTLEAQ--EYRLVKEGSPEPW--DTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPL 90 (196)
T ss_dssp EEETTCCEEEEEECCTTCC--EEEEEETTCSSCS--EEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCE
T ss_pred cccCCCeEEEEEeCCCCCc--EEEEEECCCCCCc--ccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccE
Confidence 5679999999999987654 8999998753211 11111123345689999999999999999999877643322234
Q ss_pred EEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc-eeEE--Eec--CCCCcEEEcCCCCC
Q psy11549 150 QVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN-LLVN--LTN--LDTPAFTLEDLGLD 221 (261)
Q Consensus 150 ~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~-~~~~--~~~--~~~~~~~i~~~~l~ 221 (261)
.+.+...+.+|... ......|+.++|.|.+ . +.|..+.| +++..... .... ... .....|.|.+++.+
T Consensus 91 ~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~--~-~~p~~~~W-~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 166 (196)
T 2d3v_A 91 ELVVTGFYNKPTLSALPSPVVTSGENVTLQCGS--R-LRFDRFIL-TEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPS 166 (196)
T ss_dssp EEEEECSSCCCEEEC-----------CEEEEEE--S-SCCSEEEE-EEC---CCEEEEECEECTTSCEEEEEECCCCBTT
T ss_pred EEEecCCCCCCeEEccCCccccCCCcEEEEEEc--C-CCCCEEEE-EccCCcccccccccccccCCCceeEEEeeecCcc
Confidence 44444432222110 1123459999999997 3 33444444 44433321 1111 111 12268999999999
Q ss_pred CccEEEEEEEEEcCCC---cCCceeeeeee
Q psy11549 222 GTVLMRVVISGVNAKG---RSLPVIWDDFS 248 (261)
Q Consensus 222 ~~~~Y~~~~~a~N~~G---~~~~s~~~~~~ 248 (261)
|+|.| +|.|.|..+ .+..|..+++.
T Consensus 167 D~G~Y--~C~a~n~~~~~~~s~~S~~~~l~ 194 (196)
T 2d3v_A 167 HRWML--RCYGSRRHILQVWSEPSDLLEIP 194 (196)
T ss_dssp BCEEE--EEEEEETTEEEEECCCCCCEEEC
T ss_pred cCeeE--EEEEEccCCCCccCCCCccEEEE
Confidence 99999 999999875 46677766654
No 120
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.80 E-value=2.1e-17 Score=126.76 Aligned_cols=223 Identities=13% Similarity=0.188 Sum_probs=137.0
Q ss_pred CCCCeeccCCCCceEEEEC--CeEEEccCCCCCCEeEEEEEEeCCCcc--eeeeEEEEEEeeceeecCceeEEEeeCCCc
Q psy11549 1 MAGGIPLAHNTSARIILSN--QSLVLQKVSRQSAGTYKCSAINTKGEA--TSNQLKLRVKYAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~--~~L~i~~~~~~D~G~Y~C~~~~~~~~~--~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 76 (261)
+|||++|..+ ++.+..+ ++|.|.++.+.| |.|+|.|.+. |.. ....+.|.|..+|. ..
T Consensus 46 ~~~g~~i~~~--~~~~~~~~~~~L~i~~~~~~~-g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~--------------~P 107 (303)
T 1i1r_A 46 KTNHFTIPKE--QYTIINRTASSVTFTDIASLN-IQLTCNILTF-GQLEQNVYGITIISGLPPE--------------KP 107 (303)
T ss_dssp EETTEECCGG--GCEEEETTEEEEEECSCCCSE-EEEEEEEEET-TTEEEEEEEEEEEEECCCC--------------CC
T ss_pred EECCEECChh--heeeeCCcEEEEEEcCcCCCc-eEEEEecccC-CCcceEEEEEEEeccCCCC--------------CC
Confidence 3788888543 3334443 479999999985 9999999774 332 12234444544432 22
Q ss_pred EEEEEEEeeCCCCceeEEEEcCCcccc---c-------cCCceE-EeCCceeEEEEecC-CCCcCeEEEEEEEcCCceEE
Q psy11549 77 VDIHCAVEADPPARSFKWKFNNSGETL---D-------VGSERF-SSGSRGSMLRYTPV-TELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 77 ~~l~C~~~~~~~~~~~~W~~~~~~~~~---~-------~~~~~~-~~~~~~~~l~i~~~-~~~d~g~y~C~~~~~~~~~~ 144 (261)
..|.|........ .+.|......... . ...... ........+.+.++ .....+.|++.|.|..|...
T Consensus 108 ~~l~~~~~~~~~v-~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~~~ 186 (303)
T 1i1r_A 108 KNLSCIVNEGKKM-RCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT 186 (303)
T ss_dssp EEEEEEEETTSCC-EEEEECCSCCSSCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEE
T ss_pred eeeEEEECCCCcE-EEEccCCCCCCCCcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCCcc
Confidence 2334443332222 4444422111000 0 000000 01222346788888 78888899999999988765
Q ss_pred ee-EEEEEEeCCCCCCCCcceEEee--cCCeEEEEeecCCCCCCC-eEEEEEEEeCCccceeEEEe-----cCCCCcEEE
Q psy11549 145 TP-CLYQVVLAGKPQPPQNCSVRNE--TTSSVHISCTPGYDGGLP-QTFTLELYSASDLNLLVNLT-----NLDTPAFTL 215 (261)
Q Consensus 145 ~~-~~~~v~~~~~p~~p~~~~v~~~--~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i 215 (261)
.. ..+......+|.+|.++.+... ....+.|+|.++...+.+ ..|.+.|+..+.. .|... ......+.|
T Consensus 187 s~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~--~w~~~~~~~~~~~~~~~~l 264 (303)
T 1i1r_A 187 SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS--TWSQIPPEDTASTRSSFTV 264 (303)
T ss_dssp CCCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCS--SCEECCGGGGCSCCSEEEE
T ss_pred cCCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCC--CceEEccccCCCceeEEEe
Confidence 32 1222222247888888877643 568999999976544444 5699999887643 33222 234578999
Q ss_pred cCCCCCCccEEEEEEEEEcCCCcCCceeeee
Q psy11549 216 EDLGLDGTVLMRVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 216 ~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~ 246 (261)
.+ |.+++.|+|+|.|.|..|.+.+|.+.+
T Consensus 265 ~~--L~p~t~Y~~rV~A~n~~G~G~~S~wS~ 293 (303)
T 1i1r_A 265 QD--LKPFTEYVFRIRCMKEDGKGYWSDWSE 293 (303)
T ss_dssp CS--CCTTCEEEEEEEEEETTSCSCCCCCCC
T ss_pred CC--CCCCCEEEEEEEeccCCCCCCcCCCCC
Confidence 99 999999999999999999877776554
No 121
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.80 E-value=3.5e-18 Score=131.05 Aligned_cols=182 Identities=14% Similarity=0.117 Sum_probs=121.5
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE---eCCceeEEEEecCCCCcCeEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS---SGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
+|.+...+.. +.+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++. ..+....|.|.++..+|+|.|+|
T Consensus 4 ~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~-~v~W~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 4 APHFKEELRN-LNVRYQSNATLVCKVTGHPKP-IVKWYRQGKE--IIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCEEEECCCC-EEECTTCCEEEEEEEECSSCC-EEEEEETTEE--CCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred CCeeeecccc-eEEeCCCcEEEEEEEeCCCCC-eEEEEECCEE--cccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence 4555444444 778899999999999998887 8999998743 222222322 24455689999999999999999
Q ss_pred EEEcCCceEEeeEEEEEEeCCCCC--CCCc----ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc--eeE-EE
Q psy11549 135 AAQNAIGTQVTPCLYQVVLAGKPQ--PPQN----CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN--LLV-NL 205 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v~~~~~p~--~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~--~~~-~~ 205 (261)
.+.|..|.......+.|. .+|. .|.. ..+....|..+.|.|.+ . +.|.....|++...... ..+ ..
T Consensus 80 ~a~n~~g~~~~~~~l~V~--~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~--~-g~p~p~i~W~~~~~~~~~~~~~~~~ 154 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVE--VPAKIHLPKTLEGMGAVHALRGEVVSIKIPF--S-GKPDPVITWQKGQDLIDNNGHYQVI 154 (305)
T ss_dssp EEEETTEEEEEEEEEEEC--EEEEECCCHHHHSSCCEEEETTCCEEEEEEE--E-EESCCEEEEEESSSBCCSSSSCEEE
T ss_pred EEEcCCCCccceEEEEEe--cCCccCCCccccccccEEecCCCEEEEEEEE--C-CCCCCEEEEEECCEECCCCCcEEEE
Confidence 999998876664444443 3332 2211 12334569999999997 3 33433334444432211 111 11
Q ss_pred ecCCCCcEEEcC-CCCCCccEEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 206 TNLDTPAFTLED-LGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 206 ~~~~~~~~~i~~-~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
.......+.|.+ +...+.|.| +|.|.|..|....+..+.+...
T Consensus 155 ~~~~~~~l~i~~~~~~~d~G~Y--~C~a~N~~G~~~~~~~l~v~~~ 198 (305)
T 2nzi_A 155 VTRSFTSLVFPNGVERKDAGFY--VVCAKNRFGIDQKTVELDVADV 198 (305)
T ss_dssp ECSSEEEEEETTCCCSTTCEEE--EEEEEETTEEEEEEEEEEEEBC
T ss_pred EcCCceEEEEecCCccCccEEE--EEEEEeCCCceeeEEEEEEecC
Confidence 222346788888 999999999 9999999999888777776543
No 122
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=2e-18 Score=122.60 Aligned_cols=140 Identities=18% Similarity=0.328 Sum_probs=98.5
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||++|...... .....|.|. +.+|+|.|+|.+.|.. +..+.|.|..+|.+...... ..+..|+.+.|.
T Consensus 35 ~k~~~~l~~~~~~---~~~~~l~i~--~~~d~G~Y~C~~~n~~----~~~~~l~V~~~P~~~~~~~~-~~~~~g~~~~l~ 104 (184)
T 3b5h_A 35 LKGGVVLKEDALP---GQKTEFKVD--SDDQWGEYSCVFLPEP----MGTANIQLHGPPRVKAVKSS-EHINEGETAMLV 104 (184)
T ss_dssp ESSSEEEECTTCC---CSEEEEEEC--GGGCCEEEEEEEESTT----SCEEEEEECCSCCCEESCSE-EEECTTSCEEEE
T ss_pred EeCCEEeeccccc---CCcEEEEEe--chhhCeEEEEEEECCc----CcEEEEEEecCCceeecCCC-cEEcCCCcEEEE
Confidence 4778877533211 112256666 6899999999999832 45678999988887765544 568899999999
Q ss_pred EEEeeCCCCceeEEEE---cCCccccccCCceEE--eCCceeEEEEecCC-CCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 81 CAVEADPPARSFKWKF---NNSGETLDVGSERFS--SGSRGSMLRYTPVT-ELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~---~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~-~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
|.+.+.|++..+.|++ ++..........++. .....+.|.|.++. .+|+|.|+|.|.|..|.......+.
T Consensus 105 C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 180 (184)
T 3b5h_A 105 CKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 180 (184)
T ss_dssp EECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEE
T ss_pred EEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEE
Confidence 9999998433899999 442211111123332 23445689999999 8999999999999999877754433
No 123
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.80 E-value=3.4e-18 Score=122.61 Aligned_cols=173 Identities=20% Similarity=0.231 Sum_probs=113.6
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEe-eCCCCceeEEEEcCCccccccCC---ceEEeCCc-------eeEEEEecCCCC
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVE-ADPPARSFKWKFNNSGETLDVGS---ERFSSGSR-------GSMLRYTPVTEL 127 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~W~~~~~~~~~~~~~---~~~~~~~~-------~~~l~i~~~~~~ 127 (261)
|.+...+.. ..+..|+.+.|.|.+. +.|.+ .+.|++++.. +.... .++..... ...|.|.++..+
T Consensus 3 ~~~~~~p~~-~~v~~G~~v~l~C~~~~~~p~~-~v~W~~~g~~--l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 78 (195)
T 2c5d_C 3 SPFVGNPGN-ITGARGLTGTLRCQLQVQGEPP-EVHWLRDGQI--LELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS 78 (195)
T ss_dssp CSEEECCCC-EEECTTCCEEEEEEEEEESSCC-CCEEEETTEE--CCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred CeeccChhh-eEEecCCcEEEecccccCCCCc-EEEEEECCEE--cccCCCCceEEEEccccccceeeccEEEEEecccc
Confidence 444444444 6788999999999999 87777 8999997742 22221 12222221 458999999999
Q ss_pred cCeEEEEEEEcCCceEEeeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE
Q psy11549 128 DYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV 203 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~ 203 (261)
|+|.|+|.+.+..+..... .+.+.+..+|. .|... ....|+.+.|.|.+ .+ .|.. -..|++.........
T Consensus 79 d~G~Y~C~~~~~~~~~~~~-~~~l~V~~~p~~~~~~~~~--~~~~g~~~~l~C~~--~g-~p~p~~v~W~~~~~~~~~~~ 152 (195)
T 2c5d_C 79 DTGQYQCLVFLGHQTFVSQ-PGYVGLEGLPYFLEEPEDR--TVAANTPFNLSCQA--QG-PPEPVDLLWLQDAVPLATAP 152 (195)
T ss_dssp TCEEEEEEEEETTEEEECC-CEEEEECCSCEEEECCCCE--EECTTCCEEEEEEE--EC-SSCCCEEEEEESSCBSSSST
T ss_pred CCcEEEEEEEeCCCceecc-cEEEEEecCCeEEcCCCcE--EEcCCCEEEEEeEC--CC-CCCCCEEEEEECCEeccCCC
Confidence 9999999999987654332 34555555553 33333 33569999999997 33 3433 334444433221110
Q ss_pred EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCC-ceeeeee
Q psy11549 204 NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSL-PVIWDDF 247 (261)
Q Consensus 204 ~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~-~s~~~~~ 247 (261)
. ......|.|.+ +.+.|.| +|.|.|..|... .+..+.+
T Consensus 153 ~--~~~~~~L~i~~--~~d~G~Y--~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 153 G--HGPQRSLHVPG--LNKTSSF--SCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp T--SSCCEEEEECC--CSSCEEE--EEEEEETTEEEECCCEEEEE
T ss_pred C--cCCCCeEEEcc--cccCceE--EEEEEcCCCceEEEEEEEEE
Confidence 0 02457889999 6689999 999999999775 5666665
No 124
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.80 E-value=4e-20 Score=143.17 Aligned_cols=228 Identities=12% Similarity=0.108 Sum_probs=127.5
Q ss_pred CCCCeeccCCCCc-eEEEECC------eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE---eeceee-cCceeEE
Q psy11549 1 MAGGIPLAHNTSA-RIILSNQ------SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK---YAPICK-SDRIVIV 69 (261)
Q Consensus 1 ~~ng~~l~~~~~~-~~~~~~~------~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~---~~p~~~-~~~~~~~ 69 (261)
+|||++|...... .....++ .|.|.++..+|+|.|+|.|.|..+.. ...+.+.+. ..|.+. .++.. .
T Consensus 46 ~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~-~~~~~~~~~~~~~~p~v~~~~p~~-~ 123 (323)
T 2wqr_A 46 LEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTF-EDSTKKCADSNPRGVSAYLSRPSP-F 123 (323)
T ss_dssp EETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEE-EEEECCCCCSSGGGCEEEECCCCH-H
T ss_pred EECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCc-ceeeecCCCCCCCCCEEEEcCCCH-H
Confidence 4788888632211 1111233 57788888889999999999976543 222221111 122221 11111 3
Q ss_pred EeeCCCcEEEEEEEeeCCC-C--ceeEEEEcCCccccccCCceEE--eCC---ceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 70 GASRSESVDIHCAVEADPP-A--RSFKWKFNNSGETLDVGSERFS--SGS---RGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~-~--~~~~W~~~~~~~~~~~~~~~~~--~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
.+..|+.+.|.|.+.+.++ + ..+.|++++. ..+........ ..+ ..+.|.|.++..+|.|.|+|.|.|..+
T Consensus 124 ~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g-~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 124 DLFIRKSPTITCLVVDLAPSKGTVQLTWSRASG-KPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp HHHTSSCCEEEEEEEEECCCSSCCEEEEEETTC-CCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred HhccCCeEEEEEEEeccCCCCCceEEEEEECCC-cccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC
Confidence 4668999999999988654 3 3899999652 22211111100 011 234699999999999999999999764
Q ss_pred eEEeeEEEEEEeC-CCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccce-eEE----EecCC
Q psy11549 142 TQVTPCLYQVVLA-GKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNL-LVN----LTNLD 209 (261)
Q Consensus 142 ~~~~~~~~~v~~~-~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~-~~~----~~~~~ 209 (261)
.... .+.+... ....+|. +.+.. ..|+.++|.|.+ .+..|.. .+.|+++...... ... .....
T Consensus 203 ~~~~--~~~v~~~~~~~~~P~-v~~~~~~~~~~~g~~~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 277 (323)
T 2wqr_A 203 PRAL--MRSTTKTSGPRAAPE-VYAFATPEWPGSRDKRTLACLI--QNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKG 277 (323)
T ss_dssp SSCE--EEEECCCCSCCBCCE-EEEEECCCCTTCTTEEEEEEEE--EEEBSSCCEEEEEETTEECCGGGEEECCCEECSS
T ss_pred CCCe--eeEEEccCCCCCCCE-EEEeCCChHHhcCCcEEEEEEe--eeeeCCCcEEEEEECCEECCCCceeecCcccCCC
Confidence 3222 3333221 1112222 11111 128999999997 3334432 3344454322110 010 00111
Q ss_pred -----CCcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 210 -----TPAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 210 -----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
...|.|..+..+++|.| +|.|.|..+.
T Consensus 278 g~~~~~s~L~i~~~~~~d~g~Y--~C~a~n~~~~ 309 (323)
T 2wqr_A 278 SGFFVFSRLEVTRAEWEQKDEF--ICRAVHEAAS 309 (323)
T ss_dssp SSEEEEEEEEEEHHHHHHCCCE--EEEEECTTST
T ss_pred CcEEEEEEEEEChHHccCCCEE--EEEEEeCCCC
Confidence 13577777667788999 9999999986
No 125
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.80 E-value=8.3e-19 Score=123.66 Aligned_cols=121 Identities=12% Similarity=0.158 Sum_probs=88.5
Q ss_pred ECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEc
Q psy11549 18 SNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFN 97 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~ 97 (261)
.+++|.|.+++.+|+|.|+|.+.|..+ +..+.|.|..++....... ..+..|+.+.|.|.+.+.+++..+.|+++
T Consensus 52 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~---s~~~~l~V~~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~~~~~W~k~ 126 (175)
T 1fnl_A 52 QASSYFIDAATVNDSGEYRCQTNLSTL---SDPVQLEVHIGWLLLQAPR--WVFKEEDPIHLRCHSWKNTALHKVTYLQN 126 (175)
T ss_dssp SCSEEEESSCCGGGCEEEEEECSSSCC---CCCEEEEEECSSEEEECSC--SEEETTCCEEEEEEECTTCCCEEEEEEET
T ss_pred CceEEEEeCCCcccCEEEEEEeeCCcc---cccEEEEEeCCCceeeCCC--ceecCCCCEEEEEEcCCCCCceEEEEEEC
Confidence 356899999999999999999987544 4467888875554443322 34679999999999998877668999998
Q ss_pred CCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 98 NSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
+..... ......|.|.++..+|+|.|+|.|.|..+.... ..+.+.|
T Consensus 127 g~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s-~~~~l~V 172 (175)
T 1fnl_A 127 GKDRKY---------FHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSS-ETVNITI 172 (175)
T ss_dssp TEEEEE---------EEECCCEEESSCCGGGCEEEEEEEEETTEEEEC-CCEEEEE
T ss_pred CeEccC---------CCCCCEEEEcccChhhCeEEEEEEEcCCCCccC-ccEEEEE
Confidence 742110 112346999999999999999999997654332 2344444
No 126
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.80 E-value=2.8e-18 Score=123.37 Aligned_cols=170 Identities=12% Similarity=0.119 Sum_probs=105.9
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC-ceEEeeEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI-GTQVTPCL 148 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~~~~~ 148 (261)
.+..|++++|.|.+.+.+. .+.|++++.......... ........|.|.++..+|+|.|+|.+.|.. +....+..
T Consensus 15 ~v~~G~~v~L~C~~~~~~~--~~~W~k~g~~~~~~~~~~--~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~ 90 (198)
T 1ugn_A 15 VITQGSPVTLRCQGGQETQ--EYRLYREKKTAPWITRIP--QELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDP 90 (198)
T ss_dssp EEETTCCEEEEEECCTTCC--CEEEEESSSCCHHHHTSC--HHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCC
T ss_pred cccCCCcEEEEEEecCCCc--EEEEEECCcccccccccc--ccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCcc
Confidence 5679999999999988765 699999875322111110 111223479999999999999999999977 53222223
Q ss_pred EEEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc-ceeEE--Ee--cCCCCcEEEcCCCC
Q psy11549 149 YQVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL-NLLVN--LT--NLDTPAFTLEDLGL 220 (261)
Q Consensus 149 ~~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~-~~~~~--~~--~~~~~~~~i~~~~l 220 (261)
+.+.|...+.+|... ......|+.++|.|.+ .+. +..+.|+ ++.... ..... .. ......|.|.+++.
T Consensus 91 ~~l~V~~~~~~p~i~~~~~~~v~~G~~v~L~C~~--~~~-~~~v~W~-k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 166 (198)
T 1ugn_A 91 LELVVTGAYIKPTLSAQPSPVVNSGGNVTLQCDS--QVA-FDGFILC-KEGEDEHPQCLNSQPHARGSSRAIFSVGPVSP 166 (198)
T ss_dssp EEEEEECSSCCCEEEEESCSEEETTCCEEEEEEC--SSC-CSEEEEE-EC------CEEEC------CCEEEEEECCCCT
T ss_pred EEEEEcccccCCccccCCccccCCCCcEEEEEec--CCC-CcEEEEE-ECCCccCCccccccccCCCcceeEEEecccCc
Confidence 444444433222210 0122469999999997 444 5555554 433222 11111 11 11236899999999
Q ss_pred CCccEEEEEEEEEcCCC---cCCceeeeeeee
Q psy11549 221 DGTVLMRVVISGVNAKG---RSLPVIWDDFSM 249 (261)
Q Consensus 221 ~~~~~Y~~~~~a~N~~G---~~~~s~~~~~~~ 249 (261)
+|.|.| +|.|.|..+ ++..|..+++..
T Consensus 167 ~D~G~Y--~C~a~n~~~~~~~s~~S~~~~l~V 196 (198)
T 1ugn_A 167 SRRWWY--RCYAYDSNSPYEWSLPSDLLELLV 196 (198)
T ss_dssp TSCEEE--EEEEECTTSTTEECCCCCCEEEEE
T ss_pred ccCeEE--EEEEEeCCCCccccCcCceEEEEe
Confidence 999999 999999976 556677766654
No 127
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.79 E-value=1.3e-17 Score=135.62 Aligned_cols=209 Identities=14% Similarity=0.137 Sum_probs=125.6
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc-----ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CC-
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE-----ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PP- 88 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~-----~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~- 88 (261)
.+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+..... ..+..|+.+.|.|.+.+. |.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~g~~v~L~C~~~g~~P~~ 157 (475)
T 1iga_A 80 AYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL--CSTQPDGNVVIACLVQGFFPQE 157 (475)
T ss_pred EEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc--cccCCCCeEEEEEEEeeecCCC
Confidence 38999999999999999999987652 112345777763 343332221 123589999999999987 44
Q ss_pred CceeEEEEcCCccccccCCceEE-eCCc----eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCC--------
Q psy11549 89 ARSFKWKFNNSGETLDVGSERFS-SGSR----GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAG-------- 155 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~-------- 155 (261)
+..+.|++++....... ..... ..+. .+.|.|..+..+|.|.|+|.|.|..+.. ....+.+.+..
T Consensus 158 p~~v~W~~~~~~~~~~~-~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~-~~~~v~l~V~~~~~~~~~~ 235 (475)
T 1iga_A 158 PLSVTWSESGQGVTARN-FPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPS-QDVTVPCPVPSTPPTPSPS 235 (475)
T ss_pred ceEEEEcCCCcccceEe-CCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCc-eeeeEecccccCccccccc
Confidence 45899988663211100 00000 0111 2357888888899999999999987632 22233332211
Q ss_pred ----------CCC----CCCcceEEeecCCeEEEEeecCCCCCCC---eEEEEEEEeCCccceeE---EEec-----CCC
Q psy11549 156 ----------KPQ----PPQNCSVRNETTSSVHISCTPGYDGGLP---QTFTLELYSASDLNLLV---NLTN-----LDT 210 (261)
Q Consensus 156 ----------~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p---~~~~~~~~~~~~~~~~~---~~~~-----~~~ 210 (261)
+|. +|....+ ..|+.+.|.|.+ .+..| ..+.| .. ....... .... ...
T Consensus 236 ~~~~~~~~~~~p~v~~~~p~~~~~--~~G~~v~L~C~~--~g~~p~~~~~i~W--~~-~~~~~~~~~~~~~~~~g~~~~~ 308 (475)
T 1iga_A 236 TPPTPSPSCCHPRLSLHRPALEDL--LLGSEANLTCTL--TGLRDASGVTFTW--TP-SSGKSAVQGPPERDLCGCYSVS 308 (475)
T ss_pred ccccCCCCCCCcEEEEcCCChHHh--ccCCceEEEEEE--EcccCCCceEEEE--CC-CCcCCccccCceECCCCCEEEE
Confidence 111 1111111 459999999997 34334 34444 22 2111000 0000 012
Q ss_pred CcEEEcCCCCCCccEEEEEEEEEcCCCcCCc
Q psy11549 211 PAFTLEDLGLDGTVLMRVVISGVNAKGRSLP 241 (261)
Q Consensus 211 ~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~ 241 (261)
..|.|.+++..|+|.| +|.|.|..|....
T Consensus 309 ~~L~I~~~~~~d~G~Y--~C~a~n~~~~~~~ 337 (475)
T 1iga_A 309 SVLPGCAEPWNHGKTF--TCTAAYPESKTPL 337 (475)
T ss_pred EEEEEchHHhccCCcE--EEEEEcCCCCCce
Confidence 4588999999999999 9999999997643
No 128
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.79 E-value=1.1e-18 Score=123.08 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=89.0
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcC
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNN 98 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~ 98 (261)
+++|.|.+++.+|+|.|+|.+.|..+ +..+.|.|..++....... ..+..|+.+.|.|.+.+.++...+.|++++
T Consensus 50 ~~~L~i~~v~~~d~G~Y~C~~~~~~~---s~~~~l~V~~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g 124 (176)
T 1f2q_A 50 NSSLNIVNAKFEDSGEYKCQHQQVNE---SEPVYLEVFSDWLLLQASA--EVVMEGQPLFLRCHGWRNWDVYKVIYYKDG 124 (176)
T ss_dssp SSEEEECSCCGGGCEEEEEECTTSSC---CCCEEEEEECSSEEEEESC--SEEETTSCEEEEEEEGGGCCEEEEEEEETT
T ss_pred ceEEEEeccceecCEEEEEEcCCccc---cccEEEEEeCcceeecCCc--ceeeCCCCEEEEEEecCCCCceEEEEEECC
Confidence 56999999999999999999987554 3456788875444332222 346799999999999654443489999977
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
..... ......|.|.++..+|+|.|+|.|.|..+.... ..+.+.+..+|.
T Consensus 125 ~~~~~---------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s-~~~~l~V~~~p~ 174 (176)
T 1f2q_A 125 EALKY---------WYENHNISITNATVEDSGTYYCTGKVWQLDYES-EPLNITVIKAPR 174 (176)
T ss_dssp EECCS---------CCCSSEEEESSCCGGGCEEEEEEEEETTEEEEC-CCEEEEEECSCC
T ss_pred EEEee---------ecCCCeEEECCCCcccCEEEEEEEEeCCcceEe-cCEEEEEecCCC
Confidence 42211 112347999999999999999999997444332 245566655553
No 129
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.79 E-value=2.9e-18 Score=123.68 Aligned_cols=171 Identities=13% Similarity=0.028 Sum_probs=109.8
Q ss_pred EEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCccccccCCceEEeC-----CceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 69 VGASRSESVDIHCAVEADPP----ARSFKWKFNNSGETLDVGSERFSSG-----SRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~~~~~~~~~~~-----~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
+.+..|+.+.|.|.+.+.+. ...+.|++.+... . ....++... .....|.|.++..+|+|.|+|.+.+.
T Consensus 12 v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~-~-~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 12 YTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDT-S-LQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp EEEETTSCEEEEEEECTTC---CTTEEEEEEECC--C-C-CBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcc-c-ccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 66889999999999988765 1389999943221 1 112222221 13468999999999999999999998
Q ss_pred CceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCC-CCcEEEcCC
Q psy11549 140 IGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLD-TPAFTLEDL 218 (261)
Q Consensus 140 ~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 218 (261)
.+.... .+.+.+..++..|.........|+.+.|.|.+ .+.|...+.|++............... ...+.+..+
T Consensus 90 ~~~~~~--~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~---~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v 164 (202)
T 3bp6_B 90 AAWDYK--YLTVKVKASYMRIDTRILEVPGTGEVQLTCQA---RGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRL 164 (202)
T ss_dssp TEEEEE--EEEEEEEBCCCCEEEEEEECTTTCCEEEEEEE---EEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEE
T ss_pred CCcceE--EEEEEecCCCCcccEEEEecCCCCeEEEEEEc---cccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEE
Confidence 876654 55555656665554322244679999999997 335544444444333221111111111 123445577
Q ss_pred CCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 219 GLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 219 ~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+..+.|.| +|.|.|..|....+..+.+.
T Consensus 165 ~~~d~G~Y--~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 165 KPQPSRNF--SCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp CCCTTCCE--EEEEEETTTTEEEEEEECC-
T ss_pred EcCCCCEE--EEEEEcCCcccccEEEEEec
Confidence 78899999 99999999987777666654
No 130
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.79 E-value=6.8e-19 Score=127.00 Aligned_cols=124 Identities=15% Similarity=0.214 Sum_probs=91.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
.+|.|.+++.+|+|.|+|.+.|..+.. +..+.|.|..++.. +......+..|+.+.|.|.+.+.|.| .+.|++++.
T Consensus 67 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~--p~~~~~~~~~g~~v~l~C~~~g~P~p-~v~W~~~~~ 142 (202)
T 3bp6_B 67 ALFHIPSVQVRDSGQYRCLVICGAAWD-YKYLTVKVKASYMR--IDTRILEVPGTGEVQLTCQARGYPLA-EVSWQNVSV 142 (202)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCCC--EEEEEEECTTTCCEEEEEEEEEBSCC-EEEETTCCS
T ss_pred eEEEECCCCHHHCcEEEEEEEeCCCcc-eEEEEEEecCCCCc--ccEEEEecCCCCeEEEEEEccccCCc-eEEEEeCCC
Confidence 589999999999999999999988766 66788888765421 11221356789999999999998887 899998664
Q ss_pred ccccccCCceE-EeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 100 GETLDVGSERF-SSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 100 ~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
. . ..... ...+....+.+..+..+|.|.|+|.|.|..|.......+.+
T Consensus 143 ~--~--~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 143 P--A--NTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp C--C--EEEEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred C--c--cCceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 2 1 11111 12233345677788899999999999999998777544433
No 131
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.79 E-value=6.7e-18 Score=130.07 Aligned_cols=244 Identities=13% Similarity=0.053 Sum_probs=135.8
Q ss_pred CCCCeeccCCCCceEEEEC---CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEee-CCCc
Q psy11549 1 MAGGIPLAHNTSARIILSN---QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGAS-RSES 76 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~---~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~-~g~~ 76 (261)
+|||++|.. ++.+.+..+ ++|.|.+++..|+|.|+|.+.+..+.. ...+.|.|..+|... ........ ....
T Consensus 40 ~~~g~~l~~-~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~~-~~~~~l~v~~~P~~P--~~l~c~~~~~~~~ 115 (313)
T 2d9q_B 40 RLGAELQPG-GRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQI-LDQVELRAGYPPAIP--HNLSCLMNLTTSS 115 (313)
T ss_dssp ESSSCBCTT-CEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEEE-EEEEEEEECCCCCCC--EEEEEEEETTTTE
T ss_pred EeCCEECCc-cceEEEecCeEEEEEEEeccCCCccceEEeeecCCCcee-EEEEEEccCCCCCCC--ccceeeECCCCcc
Confidence 368887742 211112222 469999999999999999886544333 455677776655321 11111121 1234
Q ss_pred EEEEEEEeeCCC-CceeE--EEEcCCccccccCCceEEe--CCceeEEEEe--cCCCCcCeEEEEEEEcCCceEEee-EE
Q psy11549 77 VDIHCAVEADPP-ARSFK--WKFNNSGETLDVGSERFSS--GSRGSMLRYT--PVTELDYGTLSCAAQNAIGTQVTP-CL 148 (261)
Q Consensus 77 ~~l~C~~~~~~~-~~~~~--W~~~~~~~~~~~~~~~~~~--~~~~~~l~i~--~~~~~d~g~y~C~~~~~~~~~~~~-~~ 148 (261)
+++.+....... +..+. +...+.... ......... ........+. .+.....+.+++.|.|..|..... ..
T Consensus 116 ~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~s~~~~ 194 (313)
T 2d9q_B 116 LICQWEPGPETHLPTSFTLKSFKSRGNCQ-TQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAENALGTSMSPQLC 194 (313)
T ss_dssp EEEEEECCSCCSSCCEEEEEEEECCTTSC-SCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEecCCCCCCCceeEEEEEEecCCCcc-cCCcccccCCCCCCCcEEEECccccccceeEEEEEEEECCCCCccCccEE
Confidence 444443322111 11222 111110000 000000000 1112234454 477778888899999999876432 12
Q ss_pred EEEEeCCCCCCCCcceEEee------cCCeEEEEeecCCCCCCC-eEEEEEEE-eCCccceeE-EEecCCCCcEEEcCCC
Q psy11549 149 YQVVLAGKPQPPQNCSVRNE------TTSSVHISCTPGYDGGLP-QTFTLELY-SASDLNLLV-NLTNLDTPAFTLEDLG 219 (261)
Q Consensus 149 ~~v~~~~~p~~p~~~~v~~~------~~~~~~l~c~~~~~~~~p-~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~i~~~~ 219 (261)
+.+....+|.+|.++.+... ....+.|+|.++...+.. ..|.+.|+ ..+...... .........+.|.+
T Consensus 195 ~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~-- 272 (313)
T 2d9q_B 195 LDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCG-- 272 (313)
T ss_dssp ECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECS--
T ss_pred EehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccccCcceEEEEeC--
Confidence 22222346888887766543 357899999986544443 57999998 444332111 22223346789999
Q ss_pred CCCccEEEEEEEEEcCCCcCC---ceeeeeeeecc
Q psy11549 220 LDGTVLMRVVISGVNAKGRSL---PVIWDDFSMSG 251 (261)
Q Consensus 220 l~~~~~Y~~~~~a~N~~G~~~---~s~~~~~~~~~ 251 (261)
|.+++.|+|+|+|.|..|.+. +|..+.+++..
T Consensus 273 L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 273 LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 999999999999999977665 55555665544
No 132
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.79 E-value=2.1e-18 Score=132.26 Aligned_cols=146 Identities=21% Similarity=0.306 Sum_probs=101.4
Q ss_pred CCCCeeccCCC--CceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE---eeceeecCceeEEEeeCCC
Q psy11549 1 MAGGIPLAHNT--SARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK---YAPICKSDRIVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~---~~p~~~~~~~~~~~~~~g~ 75 (261)
+|||.++.... .+.....+++|.|.+++.+|+|.|+|.|.|..|...+..+.|.|. .+|.+...+.. ..+..|+
T Consensus 143 ~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~-~~v~~G~ 221 (304)
T 2yd9_A 143 FKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMS-HEIMPGG 221 (304)
T ss_dssp EETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCC-BCCCTTC
T ss_pred EECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCc-eEEcCCC
Confidence 47888886432 234455677999999999999999999999988764444566664 56666544433 5678999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCC
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAG 155 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 155 (261)
.+.|.|.+.+.|.| .+.|++++.. +.... . .......|.+.++ +|+|.|+|.|.|..|..... +.+.|..
T Consensus 222 ~v~l~C~~~g~p~p-~v~W~~~~~~--l~~~~-~--~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~--~~l~V~~ 291 (304)
T 2yd9_A 222 NVNITCVAVGSPMP-YVKWMQGAED--LTPED-D--MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAV--AQITVKS 291 (304)
T ss_dssp CEEEEEEEEEESCC-EEEEEETTEE--CSCSS-S--CCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEE--EEEC---
T ss_pred eEEEEEEEeeeCCC-EEEEEECCEE--CCCcc-c--ccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEE--EEEEEec
Confidence 99999999999888 8999998742 21111 1 1123335666665 68999999999999988774 4444444
Q ss_pred CC
Q psy11549 156 KP 157 (261)
Q Consensus 156 ~p 157 (261)
++
T Consensus 292 ~~ 293 (304)
T 2yd9_A 292 LP 293 (304)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 133
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.79 E-value=2.5e-18 Score=125.41 Aligned_cols=173 Identities=10% Similarity=0.015 Sum_probs=107.8
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCcee--EEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGS--MLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
.+.+|++++|.|.+.+ +.+ .+.|++++..... ............ .|.|.++..+|+|.|+|.+.|..+....+.
T Consensus 19 ~v~~G~~vtL~C~~~~-~~~-~~~W~k~g~~~~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~ 94 (218)
T 1uct_A 19 VIPLDGSVKIQCQAIR-EAY-LTQLMIIKNSTYR--EIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSD 94 (218)
T ss_dssp EEETTCCEEEEECCCT-TCS-EEEEEEEETTEEE--ECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECC
T ss_pred ccCCCCCEEEEEEcCC-CCC-EEEEEECCCcccc--cccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecC
Confidence 4679999999999876 444 8999998743221 111111112233 799999999999999999999765443333
Q ss_pred EEEEEeCCCCCCCC-----cceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCC
Q psy11549 148 LYQVVLAGKPQPPQ-----NCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDG 222 (261)
Q Consensus 148 ~~~v~~~~~p~~p~-----~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~ 222 (261)
.+.+.+...+.+|. ...+ ..|+.++|.|.. .+..+..|. |+++....... .........|.|.+++.+|
T Consensus 95 ~~~l~V~~~~~~P~i~~~p~~~v--~~G~~v~L~C~~--~~~~~~~~~-W~k~g~~~~~~-~~~~~~~~~L~I~~v~~~D 168 (218)
T 1uct_A 95 TLELVVTGLYGKPFLSADRGLVL--MPGENISLTCSS--AHIPFDRFS-LAKEGELSLPQ-HQSGEHPANFSLGPVDLNV 168 (218)
T ss_dssp CEEEEEECSSCCCEEEESSCSEE--CTTCCCEEEEEC--SSSCCSEEE-EEETTCSSCCS-EEECSSSEEEECCSCCGGG
T ss_pred CEEEEEcCcccCCEEEeCCCCcc--CCCCCEEEEEeC--CCCCCCEEE-EEECCCccccc-ccCCCccCEEEEccCCccc
Confidence 44555544322221 1222 569999999954 233334444 44544333211 1123345789999999999
Q ss_pred ccEEEEEEEEEcCC---CcCCceeeeeeeeccccc
Q psy11549 223 TVLMRVVISGVNAK---GRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 223 ~~~Y~~~~~a~N~~---G~~~~s~~~~~~~~~~~~ 254 (261)
+|.| +|.|.|.. ..+..|..+.+...+..+
T Consensus 169 ~G~Y--~C~a~n~~~~~~~s~~S~~~~l~V~g~~~ 201 (218)
T 1uct_A 169 SGIY--RCYGWYNRSPYLWSFPSNALELVVTDSIH 201 (218)
T ss_dssp CEEE--EEEEECTTSTTEECCCCCCEEEEEC----
T ss_pred CEEE--EEEEEcCCCCCcCCCCCCcEEEEEecCCC
Confidence 9999 99999864 456778877776665443
No 134
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=1.9e-18 Score=125.98 Aligned_cols=143 Identities=24% Similarity=0.358 Sum_probs=101.0
Q ss_pred CCCCeeccCCC--CceEEEECCeE----EEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee-ceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNT--SARIILSNQSL----VLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA-PICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~--~~~~~~~~~~L----~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~-p~~~~~~~~~~~~~~ 73 (261)
+|||+++.... ..+....++.+ .|.+++.+|+|.|+|.+.|..|...+..+.|.|... |.+...... ..+..
T Consensus 44 ~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~ 122 (217)
T 2vr9_A 44 FKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKD-TRVAK 122 (217)
T ss_dssp EETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCC-EEECT
T ss_pred EECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCc-cEEcC
Confidence 47888886432 23444455555 688999999999999999998876555677877753 333333333 66889
Q ss_pred CCcEEEEEEE-eeCCCCceeEEEEcCCccccc-----cCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee
Q psy11549 74 SESVDIHCAV-EADPPARSFKWKFNNSGETLD-----VGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 74 g~~~~l~C~~-~~~~~~~~~~W~~~~~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 146 (261)
|+.+.|.|.+ .+.|.+ .+.|++++...... ....++.... ...|.|.++..+|+|.|+|.|.|..|.....
T Consensus 123 g~~v~l~C~~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 199 (217)
T 2vr9_A 123 GETALLECGPPKGIPEP-TLIWIKDGVPLDDLKAMSFGASSRVRIVD-GGNLLISNVEPIDEGNYKCIAQNLVGTRESS 199 (217)
T ss_dssp TSCEEECCBCCCEESCC-EEEEEETTEEECCCCCC---CCCSEEEET-TTEEEESSCCSTTCEEEEEEEEETTEEEECC
T ss_pred CCeEEEEEECCCCCCCC-eEEEEECCcCCCcccccccccCCcEEecC-CCcEEEeeCCHHHCeEEEEEEEcccceeccc
Confidence 9999999998 787777 89999987421100 0111222211 2369999999999999999999999987764
No 135
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.79 E-value=7e-19 Score=128.36 Aligned_cols=132 Identities=18% Similarity=0.208 Sum_probs=90.3
Q ss_pred CCCCeeccCCCCce-EEEECC--eEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEe---eceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTSAR-IILSNQ--SLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKY---APICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~~~-~~~~~~--~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~---~p~~~~~~~~~~~~~~ 73 (261)
||||+++....... ....++ +|.|.+++.+|+|.|+|.+.|..+. ..+..+.|.|.. +|.+...+. ..+.+
T Consensus 42 ~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p~--~~v~~ 119 (218)
T 1uct_A 42 MIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRG--LVLMP 119 (218)
T ss_dssp EEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESSC--SEECT
T ss_pred EECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCCC--CccCC
Confidence 46777664322111 112345 8999999999999999999998653 235567888874 444443322 35679
Q ss_pred CCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 74 SESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
|++++|.|...+.+.+ .+.|++++.... . .. ........|.|.++..+|+|.|+|.|.+..
T Consensus 120 G~~v~L~C~~~~~~~~-~~~W~k~g~~~~--~--~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 120 GENISLTCSSAHIPFD-RFSLAKEGELSL--P--QH-QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp TCCCEEEEECSSSCCS-EEEEEETTCSSC--C--SE-EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CCCEEEEEeCCCCCCC-EEEEEECCCccc--c--cc-cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 9999999976666655 899999874321 1 11 123334579999999999999999999853
No 136
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.79 E-value=8.4e-19 Score=135.11 Aligned_cols=125 Identities=18% Similarity=0.224 Sum_probs=94.4
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
.|.|.++..+|+|.|+|.|.|..+.. .+.++.|.|.++|.+.........+..|+.++|.|.+.+.|.|..+.|++++.
T Consensus 178 ~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~ 257 (313)
T 4fqp_A 178 LWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMG 257 (313)
T ss_dssp EEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTB
T ss_pred eeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCE
Confidence 58999999999999999999986653 35567788888887653332224466789999999999998886799999874
Q ss_pred ccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 100 GETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
. + .... ...+ ..|.|.++..+|+|.|+|.|.|..|.......+.|.
T Consensus 258 ~--l--~~~~-~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 258 P--L--PPFA-VAQG--AQLLIRPVDKPINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp S--C--CTTE-EEET--TEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred E--C--CCce-EEeC--CEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 2 2 1111 1122 369999999999999999999999987775444433
No 137
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=7.4e-18 Score=119.47 Aligned_cols=161 Identities=14% Similarity=0.223 Sum_probs=105.4
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCc-eEEeCC--ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSE-RFSSGS--RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~-~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
..+..|+.+.|.|.+.+.|.+ .+.|++++.. +..... .+.... ....|.|.++..+|+|.|+|.+.+..+....
T Consensus 12 ~~v~~G~~v~l~C~~~~~p~~-~v~W~k~~~~--~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 88 (182)
T 1rhf_A 12 LTVSQGQPVKLNCSVEGMEEP-DIQWVKDGAV--VQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS 88 (182)
T ss_dssp EEEETTCCEEEEEEEESCSSC-CEEEEETTEE--CCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEEC
T ss_pred eEEeCCCcEEEEEEEeCCCCC-eEEEEECCee--cCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEE
Confidence 678899999999999987777 8999997742 222211 111111 1357999999999999999999998664332
Q ss_pred eEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCC
Q psy11549 146 PCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLD 221 (261)
Q Consensus 146 ~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~ 221 (261)
..+.+.+..+|. .|.. +....|..+.|.|.+ .+..+. .+.|+ +........ . .....+.|.+ ++
T Consensus 89 -~~~~l~V~~~p~~~~~~~~--~~~~~g~~~~l~C~~--~g~p~p~~v~W~-~~~~~~~~~-~---~~~~~L~i~~--~~ 156 (182)
T 1rhf_A 89 -QPVWLTVEGVPFFTVEPKD--LAVPPNAPFQLSCEA--VGPPEPVTIVWW-RGTTKIGGP-A---PSPSVLNVTG--VT 156 (182)
T ss_dssp -CCEEEEEECSCEEEECCCC--EEECTTCCEEEEEEE--ECSSSCCEEEEE-ETTEECSCS-E---ESSEEEEECC--CS
T ss_pred -EEEEEEEecCCeEEecCcc--eEecCCCEEEEEeEe--cCCCCCCEEEEE-cCCeECCCC-C---CCceEEEEec--cc
Confidence 134445545553 3333 333569999999997 333333 44443 432221101 1 1457889999 68
Q ss_pred CccEEEEEEEEEcCCCcCCc-eeeee
Q psy11549 222 GTVLMRVVISGVNAKGRSLP-VIWDD 246 (261)
Q Consensus 222 ~~~~Y~~~~~a~N~~G~~~~-s~~~~ 246 (261)
+.|.| +|.|.|..|.... +..+.
T Consensus 157 d~G~Y--~C~a~N~~g~~~s~~~~l~ 180 (182)
T 1rhf_A 157 QSTMF--SCEAHNLKGLASSRTATVH 180 (182)
T ss_dssp SCEEE--EEEEEETTEEEECCCEEEE
T ss_pred cCeEE--EEEEECCCCCcccceEEEE
Confidence 99999 9999999997643 44443
No 138
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.79 E-value=5.7e-18 Score=120.96 Aligned_cols=168 Identities=18% Similarity=0.162 Sum_probs=110.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEE-cCCccccccCCceEEe---CCceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKF-NNSGETLDVGSERFSS---GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~-~~~~~~~~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
..+..|+.+.|.|.+.+.++...+.|++ ++. .+.....++.. ......|.|.++..+|+|.|+|.+.+..+. .
T Consensus 12 ~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~-~ 88 (191)
T 1epf_A 12 GEISVGESKFFLCQVAGDAKDKDISWFSPNGE--KLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGT-Q 88 (191)
T ss_dssp EEEETTCCEEEEEEECCCSCCCEEEEECTTSC--EECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTE-E
T ss_pred cEEcCCCCEEEEEECCCCCCCceEEEEeCCCc--cccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCc-c
Confidence 5678999999999999987434899998 553 23223333332 245568999999999999999999998743 2
Q ss_pred eeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEecCCCCcEEEcCCC
Q psy11549 145 TPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTNLDTPAFTLEDLG 219 (261)
Q Consensus 145 ~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~ 219 (261)
....+.+.+..+|. .|... ....|+.+.|.|.+ .+..+..+ .|++....... ...........|.|.++.
T Consensus 89 ~~~~~~l~v~~~p~~~~~~~~~--~~~~g~~~~l~C~~--~g~p~~~v-~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 163 (191)
T 1epf_A 89 SEATVNVKIFQKLMFKNAPTPQ--EFKEGEDAVIVCDV--VSSLPPTI-IWKHKGRDVILKKDVRFIVLSNNYLQIRGIK 163 (191)
T ss_dssp EEEEEEEEEECCSEEEECCSSE--ECCTTSCEEECCEE--ECSSCCEE-EEEETTEEGGGGCCTTEEECTTSCEEETTCC
T ss_pred eEEEEEEEeecCceEecCCCcE--eecCCCeEEEEEEE--CCCCCCEE-EEEECCEEeeccCCceEEEecCCeEEECCCC
Confidence 22355566555553 33333 33569999999997 33333444 44444322210 001112234589999999
Q ss_pred CCCccEEEEEEEEEcCCCcCCceeeee
Q psy11549 220 LDGTVLMRVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 220 l~~~~~Y~~~~~a~N~~G~~~~s~~~~ 246 (261)
..|.|.| +|.|.|..|....+..+.
T Consensus 164 ~~d~G~Y--~C~a~n~~~~~~~~~~i~ 188 (191)
T 1epf_A 164 KTDEGTY--RCEGRILARGEINFKDIQ 188 (191)
T ss_dssp GGGCEEE--EEEEEEGGGTEEEEEEEE
T ss_pred hhhCEEE--EEEEEEecceeEEEEEEE
Confidence 9999999 999999987554444433
No 139
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.79 E-value=9.3e-19 Score=136.64 Aligned_cols=119 Identities=12% Similarity=0.146 Sum_probs=80.3
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKW 94 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W 94 (261)
.+|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.+..+.|
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~n~~~~~-~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W 156 (344)
T 1za6_B 79 AYVELSSLRSEDTAVYFCTRSLNMAYW-GQGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPEPVTVSW 156 (344)
T ss_dssp EEEEECSCCGGGCEEEEEEETTTTCEE-CCCEEEEECSSCCBCCEEEEECCS-CTTTSSSEEEEEEEEEEEBSSCCCEEE
T ss_pred EEEEECCCCcccCEEEEEEEecCccee-cCcEEEEEecCCCCCCeEEEcccc-ccccCCCcEEEEEEEeeEECCCeEEEE
Confidence 389999999999999999998854433 3456788873 3333321111 234689999999999987 43348999
Q ss_pred EEcCCcccccc------CCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 95 KFNNSGETLDV------GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 95 ~~~~~~~~~~~------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
++++....... ....+. ..+.|.|..+..+| |.|+|.|.|..+...
T Consensus 157 ~k~g~~~~~~~~~~~~~~~~~~~---~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~ 208 (344)
T 1za6_B 157 NSGALTSGVHTFPAVLQSSGLYS---LSSVVTVPSSSLGT-QTYICNVNHKPSNTK 208 (344)
T ss_dssp TTTTBCTTEEECCCEECTTSCEE---EEEEEEEETTHHHH-BCEEEEEEEGGGTEE
T ss_pred ecCCccCceeECCCeECCCCCEE---EEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 98774211110 011111 12368898888888 999999999877543
No 140
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.79 E-value=3.2e-19 Score=128.46 Aligned_cols=164 Identities=15% Similarity=0.084 Sum_probs=101.5
Q ss_pred EEeeCCCcEEEEEE---EeeCCCCceeEEEEcCCcccccc----------------CCceEEeCCceeEEEEecCCCCcC
Q psy11549 69 VGASRSESVDIHCA---VEADPPARSFKWKFNNSGETLDV----------------GSERFSSGSRGSMLRYTPVTELDY 129 (261)
Q Consensus 69 ~~~~~g~~~~l~C~---~~~~~~~~~~~W~~~~~~~~~~~----------------~~~~~~~~~~~~~l~i~~~~~~d~ 129 (261)
+.+..|+.++|.|. +.+.|.+ .+.|++++....... .............|.|.++..+|+
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~-~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEI-EVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTS-EEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEEcCCCEEEEeeeeccCCCCCc-EEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 46779999999996 4556666 899999764322100 000112234456899999999999
Q ss_pred eEEEEEEEcCCceEEeeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce----e
Q psy11549 130 GTLSCAAQNAIGTQVTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL----L 202 (261)
Q Consensus 130 g~y~C~~~~~~~~~~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~----~ 202 (261)
|.|+|.|.|..|.......+.| ..||. .|... ....|+.+.|.|.+ .|.|.+.+.|+++.+.... .
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V--~~p~~~~~~~~~~--~v~~g~~~~l~C~~---~G~P~P~v~W~~~~~~~~~~~~~~ 154 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSV--VKPLTLSVHSERS--QFPDFSVLTVTCTV---NAFPHPHVQWLMPEGVEPAPTAAN 154 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE--EEEEEEEEEEEEC--CSSCSCCEEEEEEE---EEESCCEEEECCC-----------
T ss_pred eEEEEEEEcCCCcEEEEEEEEe--cCCceeeecceeE--EEcCCCEEEEEEEc---CCCCCCEEEEEECCeeecCccccc
Confidence 9999999998887776544444 33332 11111 12458999999997 3455443444443322211 1
Q ss_pred EEEecCCCCc---EEEcCCCCCCccEEEEEEEEEcCCCcCCce
Q psy11549 203 VNLTNLDTPA---FTLEDLGLDGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 203 ~~~~~~~~~~---~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
.......... +.|.+++.+|.|.| +|.|.|.+|..+..
T Consensus 155 ~r~~~~~~g~l~il~i~~v~~~D~G~Y--tC~A~N~~G~a~~v 195 (203)
T 4fa8_A 155 GGVMKEKDGSLSVAVDLSLPKPWHLPV--TCVGKNDKEEAHGV 195 (203)
T ss_dssp -CCEECTTSCEEEEEEEEECSSCCCCE--EEEEESSSCEEEEE
T ss_pred ceEEEeCCCCEEEEEECCCCHHHCEEE--EEEEEcCCCEEEEE
Confidence 1111122233 34457788999999 99999999987653
No 141
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.79 E-value=4e-19 Score=138.88 Aligned_cols=129 Identities=22% Similarity=0.290 Sum_probs=99.1
Q ss_pred ECCeEEEccCCCCCCE-eEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEE
Q psy11549 18 SNQSLVLQKVSRQSAG-TYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKF 96 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G-~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~ 96 (261)
.+++|.|.+++.+|+| .|+|.|.|..|.. +..+.|.|..+|.+ ....+..|+.++|.|.+.+.|.| .+.|++
T Consensus 210 ~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~-~~~~~l~V~~~P~i-----~~~~~~~g~~v~l~C~~~g~P~p-~i~W~~ 282 (347)
T 2ifg_A 210 PSLGLTLANVTSDLNRKNVTCWAENDVGRA-EVSVQVNVSFPASV-----QLHTAVEMHHWCIPFSVDGQPAP-SLRWLF 282 (347)
T ss_dssp SEEEEEEESCCSTTTTCCEEECCEETTEEC-CEEECCCCBEEEEE-----EECCCEESSSEEEEEEEEEESCC-EEEEEE
T ss_pred ccceEEEeeCChHHCCCeEEEEEEcCCCCE-EEEEEEEEcCCCee-----eeccCccCceEEEEEEeeecCCC-cEEEEe
Confidence 4568999999999999 9999999998877 66788899888876 11334579999999999999888 899999
Q ss_pred cCCccccccCCce-EEeC-------CceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCC
Q psy11549 97 NNSGETLDVGSER-FSSG-------SRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 97 ~~~~~~~~~~~~~-~~~~-------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p 157 (261)
++.. +...... .... .....|.|.++..+|+|.|+|.|.|..|.... .+.+.|..+|
T Consensus 283 ~g~~--l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~--~~~l~V~~~P 347 (347)
T 2ifg_A 283 NGSV--LNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA--SIMAAFMDNP 347 (347)
T ss_dssp TTEE--CCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEE--EEEECSCCCC
T ss_pred CCEE--CCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceee--EEEEEecCCC
Confidence 8742 2211111 1111 12457999999999999999999999998766 5556665554
No 142
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.78 E-value=5.7e-18 Score=123.03 Aligned_cols=174 Identities=15% Similarity=0.202 Sum_probs=115.1
Q ss_pred EEeeCCCcEEEEEEEeeCCC---CceeEEEEcCCcc--------------ccc----cCCceEEeCC-----ceeEEEEe
Q psy11549 69 VGASRSESVDIHCAVEADPP---ARSFKWKFNNSGE--------------TLD----VGSERFSSGS-----RGSMLRYT 122 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~---~~~~~W~~~~~~~--------------~~~----~~~~~~~~~~-----~~~~l~i~ 122 (261)
+.+.+|+.+.|.|.+.+.+. ...+.|++.+... ... ....++.... ....|.|.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~ 89 (214)
T 3jz7_A 10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVT 89 (214)
T ss_dssp EEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEEC
T ss_pred EEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEc
Confidence 67889999999999998763 2389999843211 110 0012222222 35579999
Q ss_pred cCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcce-EEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce
Q psy11549 123 PVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCS-VRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL 201 (261)
Q Consensus 123 ~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~-v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~ 201 (261)
++..+|+|.|+|.+.+..+.... .+.+.|..+|..+.... .....|..+.|.|.+ ..+.|.....|++.......
T Consensus 90 ~v~~~D~G~Y~C~~~~~~~~~~~--~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~--~~g~p~~~v~W~~~~~~~~~ 165 (214)
T 3jz7_A 90 NLQLSDIGTYQCKVKKAPGVANK--KFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEP--KEGSLPLQFEWQKLSDSQTM 165 (214)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEE--EEEEEEECCCBSCEEEEESCCBTTCCEEEEEEC--SBCCSSCEEEEEECSTTCCC
T ss_pred cCChhhCeEEEEEEEeCCCcccc--EEEEEEEcCCCCceeeeecceecCCcEEEEecC--CCCCCCCEEEEEECCCCCcc
Confidence 99999999999999998876655 44555555665443211 113568999999997 35555443444453222211
Q ss_pred eE-EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 202 LV-NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 202 ~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.. .........|.|.+++.+|.|.| +|.|.|.+|....+..+.+.
T Consensus 166 ~~~~~~~~~~~~L~i~~~~~~d~G~Y--~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 166 PTPWLAEMTSPVISVKNASSEYSGTY--SCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp CGGGGGGTTSSEEEECSCCGGGCEEE--EEEEECSSCEEEEEEEECCB
T ss_pred CccceeccCCCEEEEecCCHHHCEEE--EEEEEcCCCcEEEEEEEEEe
Confidence 11 11223456899999999999999 99999999988777777665
No 143
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.78 E-value=9.6e-18 Score=127.59 Aligned_cols=144 Identities=22% Similarity=0.319 Sum_probs=103.9
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE----eeceeecCceeEEEeeCCCcE
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK----YAPICKSDRIVIVGASRSESV 77 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~ 77 (261)
+||.++.. ..+.....+++|.|.+++.+|+|.|+|.+.+......+..+.|.|. .+|.+...... ..+..|+.+
T Consensus 127 ~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~-~~~~~g~~~ 204 (289)
T 3ejj_X 127 EGGRQVLR-KTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSK-LVRIRGEAA 204 (289)
T ss_dssp GGGEECCT-TCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSS-EECCSSSCE
T ss_pred cCCeecCC-CccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCc-eEEEeCCcE
Confidence 46666653 3445566678999999999999999999995544444677888888 56666544433 456789999
Q ss_pred EEEEEEee-CCCCceeEEEEcCCccccccCCce-EE--eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 78 DIHCAVEA-DPPARSFKWKFNNSGETLDVGSER-FS--SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 78 ~l~C~~~~-~~~~~~~~W~~~~~~~~~~~~~~~-~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
.|.|.+.+ .|.+ .+.|++++.. +...... +. .......|.|.++..+|+|.|+|.|.|..|....++.+.
T Consensus 205 ~l~C~~~~~~p~~-~i~W~~~~~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~ 278 (289)
T 3ejj_X 205 QIVCSATNAEVGF-NVILKRGDTK--LEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQ 278 (289)
T ss_dssp EEEEEEEESSSCC-EEEEEETTEE--CCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEE
T ss_pred EEEEEeCCCCCce-EEEEEECCEE--eeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEE
Confidence 99999998 4556 8999998742 2111110 00 011245799999999999999999999999888854443
No 144
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.78 E-value=3.1e-19 Score=137.15 Aligned_cols=150 Identities=15% Similarity=0.162 Sum_probs=105.6
Q ss_pred CCCCeeccCCC---CceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEEEEEeeceeecCceeEEEeeCCCc
Q psy11549 1 MAGGIPLAHNT---SARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKLRVKYAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 1 ~~ng~~l~~~~---~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 76 (261)
+|||+++.... ........+.|.|.++..+|+|.|+|.|.|..+.. .+..+.|.|..+|.+.........+..|+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~ 229 (308)
T 4fom_A 150 EGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKG 229 (308)
T ss_dssp CCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCS
T ss_pred EECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeecccc
Confidence 47777774211 00111122479999999999999999999987654 345677788888887644433355678899
Q ss_pred EEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCC
Q psy11549 77 VDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGK 156 (261)
Q Consensus 77 ~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 156 (261)
+.|.|.+.+.|+|..+.|++++.. + .... .......+.|.++..+|+|.|+|.|.|..|.... .+.|.|..+
T Consensus 230 v~l~C~~~g~P~p~~v~W~k~~~~--~--~~~~--~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~--~~~l~V~~~ 301 (308)
T 4fom_A 230 VNLKCNADANPPPFKSVWSRLDGQ--W--PDGL--LASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSD--QKVIYISDP 301 (308)
T ss_dssp CEEECCEEEESCEEEEECCBSSSC--C--CSSC--BCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEE--EEECCEECC
T ss_pred EEEEEEEecCCCCcEEEEEECCeE--C--CCcE--EEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEE--EEEEEEEcC
Confidence 999999999988767999997742 1 1111 1122335778899999999999999999998776 455556566
Q ss_pred CC
Q psy11549 157 PQ 158 (261)
Q Consensus 157 p~ 158 (261)
|.
T Consensus 302 P~ 303 (308)
T 4fom_A 302 PH 303 (308)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 145
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.78 E-value=3.7e-19 Score=128.04 Aligned_cols=135 Identities=15% Similarity=0.196 Sum_probs=90.6
Q ss_pred CCCCeeccCCC-CceEEEECCeEEEccCCCCCCEeEEEEEEeCC-Cc-ceeeeEEEEEEe---eceeecCceeEEEeeCC
Q psy11549 1 MAGGIPLAHNT-SARIILSNQSLVLQKVSRQSAGTYKCSAINTK-GE-ATSNQLKLRVKY---APICKSDRIVIVGASRS 74 (261)
Q Consensus 1 ~~ng~~l~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~-~~-~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g 74 (261)
+|||.++.... .......+++|.|.+++.+|+|.|+|.+.|.. +. ..+..+.|.|.. +|.+.... . ..+.+|
T Consensus 38 ~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~-~~v~~G 115 (198)
T 1ugn_A 38 YREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQP-S-PVVNSG 115 (198)
T ss_dssp EESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEES-C-SEEETT
T ss_pred EECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCC-c-cccCCC
Confidence 46777664211 11122345789999999999999999999987 42 235678888876 34443222 1 357799
Q ss_pred CcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE--e-CCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 75 ESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS--S-GSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 75 ~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+.++|.|.+.+. ++ .+.|++++.... .....+. . ......|.|.++..+|+|.|+|.|.|..+
T Consensus 116 ~~v~L~C~~~~~-~~-~v~W~k~g~~~~--~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 116 GNVTLQCDSQVA-FD-GFILCKEGEDEH--PQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CCEEEEEECSSC-CS-EEEEEEC--------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CcEEEEEecCCC-Cc-EEEEEECCCccC--CccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 999999999988 45 899999875321 1111111 1 12246899999999999999999999765
No 146
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=1.8e-18 Score=134.45 Aligned_cols=148 Identities=23% Similarity=0.319 Sum_probs=104.3
Q ss_pred CCCCeeccCCCCc---eEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee----ceeecCceeEEEeeC
Q psy11549 1 MAGGIPLAHNTSA---RIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA----PICKSDRIVIVGASR 73 (261)
Q Consensus 1 ~~ng~~l~~~~~~---~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~----p~~~~~~~~~~~~~~ 73 (261)
+|||+++..+... .....+.+|.|.+++.+|+|.|+|.+.|..|.. +..+.|.|... |.+.........+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~ 236 (334)
T 1ry7_B 158 LKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSI-RQTYTLDVLERSPHRPILQAGLPANQTAVL 236 (334)
T ss_dssp CBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEE-EEEEEEEEECCCCSSCBCCTTCSCCEEEES
T ss_pred EECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCE-EEEEEEEEecCCCCCCceEecCCCceEEeC
Confidence 5788888643321 112234589999999999999999999998876 66788888753 333322222366889
Q ss_pred CCcEEEEEEEeeCCCCceeEEEE----cCCccccccCCc-eEEe---------CCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 74 SESVDIHCAVEADPPARSFKWKF----NNSGETLDVGSE-RFSS---------GSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 74 g~~~~l~C~~~~~~~~~~~~W~~----~~~~~~~~~~~~-~~~~---------~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
|+.+.|.|.+.+.|.+ .+.|++ ++. .+..... .+.. ......|.|.++..+|+|.|+|.|.|.
T Consensus 237 G~~v~l~C~~~g~p~p-~v~W~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 313 (334)
T 1ry7_B 237 GSDVEFHCKVYSDAQP-HIQWLKHVEVNGS--KVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNS 313 (334)
T ss_dssp SCCEEECCCCBCSSCE-EEEEEECCCGGGC--SBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEES
T ss_pred CCCEEEEEEEecCCCC-eEEEEECCcCCCc--cccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCC
Confidence 9999999999998887 899998 432 2211111 1111 112237999999999999999999999
Q ss_pred CceEEeeEEEEEE
Q psy11549 140 IGTQVTPCLYQVV 152 (261)
Q Consensus 140 ~~~~~~~~~~~v~ 152 (261)
.|.......+.|.
T Consensus 314 ~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 314 IGFSHHSAWLVVL 326 (334)
T ss_dssp SCCEEEEEEEEEE
T ss_pred CCeEEEEEEEEEE
Confidence 9988775555444
No 147
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=128.83 Aligned_cols=137 Identities=17% Similarity=0.202 Sum_probs=85.0
Q ss_pred CCCCeeccCCCC-ceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEEEEEe---eceeecCceeEEEeeCCC
Q psy11549 1 MAGGIPLAHNTS-ARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKLRVKY---APICKSDRIVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~ 75 (261)
||||.++..... ......+++|.|.+++.+|+|.|+|.+.|..+.. .+..+.|.|.. +|.+...+ . ..+.+|+
T Consensus 38 ~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~-~~v~~G~ 115 (196)
T 2d3v_A 38 VKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALP-S-PVVTSGE 115 (196)
T ss_dssp EETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC------------
T ss_pred EECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccC-C-ccccCCC
Confidence 477777743211 0111234589999999999999999999887642 25567888876 45544332 2 4577999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEe-CCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSS-GSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
.++|.|.+.+.| + .+.|++++.............. ......|.|.++..+|+|.|+|.|.|..+
T Consensus 116 ~v~L~C~~~~~p-~-~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 116 NVTLQCGSRLRF-D-RFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp -CEEEEEESSCC-S-EEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cEEEEEEcCCCC-C-EEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 999999999887 5 8999998753211000000111 12345899999999999999999998754
No 148
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.78 E-value=2.2e-18 Score=131.32 Aligned_cols=149 Identities=18% Similarity=0.240 Sum_probs=103.4
Q ss_pred CeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEE
Q psy11549 4 GIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY----APICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 4 g~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l 79 (261)
|.++. ...+.....+++|.|.+++.+|+|.|+|.+.|..+...+..+.|.|.. +|.+...+.. ..+..|+.+.|
T Consensus 129 ~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~-~~~~~g~~v~l 206 (292)
T 4dkd_C 129 GRPLM-RHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAE-LVRIRGEAAQI 206 (292)
T ss_dssp GCCCC-SSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSC-BCCCSSSCEEE
T ss_pred CCccc-cCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCc-eeEecCCCEEE
Confidence 55553 233344555667999999999999999999988776656688999986 6766544433 44569999999
Q ss_pred EEEEeeCCCCceeEEEEcCCccccccCCc-eEEeC--CceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCC
Q psy11549 80 HCAVEADPPARSFKWKFNNSGETLDVGSE-RFSSG--SRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGK 156 (261)
Q Consensus 80 ~C~~~~~~~~~~~~W~~~~~~~~~~~~~~-~~~~~--~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 156 (261)
.|.+.+.+++..+.|++++.... .... .+... .....|.|.++..+|+|.|+|.|.|..|..... +.+.|...
T Consensus 207 ~C~~~~~~~~~~~~w~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~--~~l~V~~~ 282 (292)
T 4dkd_C 207 VCSASSVDVNFDVFLQHNNTKLA--IPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTS--MFFRVVES 282 (292)
T ss_dssp EEEEEESSSCCEEECCBSSCCCC--CCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEE--EEECC---
T ss_pred EEEecCCCCceEEEEeCCCcccc--cCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeE--EEEEEeeC
Confidence 99999888765788887764221 1111 11111 123479999999999999999999999987764 44555444
Q ss_pred CC
Q psy11549 157 PQ 158 (261)
Q Consensus 157 p~ 158 (261)
..
T Consensus 283 ~~ 284 (292)
T 4dkd_C 283 AG 284 (292)
T ss_dssp --
T ss_pred CC
Confidence 43
No 149
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.78 E-value=7.9e-18 Score=120.04 Aligned_cols=169 Identities=13% Similarity=0.073 Sum_probs=106.4
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+..|++++|.|.+.+. ++ .+.|++++........ ..........|.|.++..+|+|.|+|.+.+..+....+..+
T Consensus 14 ~v~~G~~v~L~C~~~~~-~~-~~~w~k~g~~~~~~~~--~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~ 89 (188)
T 1oll_A 14 MVPKEKQVTICCQGNYG-AV-EYQLHFEGSLFAVDRP--KPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL 89 (188)
T ss_dssp EEETTCCEEEEEECCTT-CC-EEEEEETTEEEEEECC--SSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred cCCCCCCEEEEEecCCC-CC-EEEEEECCCccccccc--ccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCce
Confidence 46799999999998753 33 7999998743221101 11122345579999999999999999998865533222234
Q ss_pred EEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 150 QVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 150 ~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
.+.+...+.+|... ......|+.++|.|.+ .+ .+..|. |+++....... .........|.|.+++.+|.|.|
T Consensus 90 ~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~--~~-~~~~~~-w~k~g~~~~~~-~~~~~~~~~L~I~~v~~~d~G~Y 164 (188)
T 1oll_A 90 DLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRL--DT-ATSMFL-LLKEGRSSHVQ-RGYGKVQAEFPLGPVTTAHRGTY 164 (188)
T ss_dssp EEEEESCSCCCEEEEESCSEEETTCEEEEEEEC--SS-SCSEEE-EEEESSSCEEE-EEECSSEEEEEEEECCGGGCEEE
T ss_pred EEEecccCCCCeEEECCCCccccCCEEEEEEEc--CC-CCCEEE-EEECCcccccc-ccCCCceeEEEECCCCcCCCcEE
Confidence 44444332222111 0112469999999997 22 344444 44554433221 11223457899999999999999
Q ss_pred EEEEEEEcCC-CcCCceeeeeeee
Q psy11549 227 RVVISGVNAK-GRSLPVIWDDFSM 249 (261)
Q Consensus 227 ~~~~~a~N~~-G~~~~s~~~~~~~ 249 (261)
+|.|.|.. +.+..|..+.+..
T Consensus 165 --~C~a~n~~~~~s~~S~~~~l~V 186 (188)
T 1oll_A 165 --RCFGSYNNHAWSFPSEPVKLLV 186 (188)
T ss_dssp --EEECEEETTEECCCCCCEEEEE
T ss_pred --EEEEEcCCCcCCCCCCcEEEEe
Confidence 88888874 4567777777654
No 150
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.77 E-value=8.8e-19 Score=141.92 Aligned_cols=210 Identities=8% Similarity=0.033 Sum_probs=120.5
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC---------c--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEee
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG---------E--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEA 85 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~---------~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~ 85 (261)
+|.|.+++.+|+|.|+|.+.|..+ . .....+.|.|.. +|.+...... ..+..|+.+.|.|.+.+
T Consensus 80 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g 158 (457)
T 1hzh_H 80 YMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKD 158 (457)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCC-SCCCTTCCEEEEEEEES
T ss_pred EEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCcc-ccccCCCcEEEEEEEeE
Confidence 899999999999999999998765 1 123456777764 3443321111 22568999999999998
Q ss_pred C-CCCceeEEEEcCCccccccCCceEEeCCc----eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCC----
Q psy11549 86 D-PPARSFKWKFNNSGETLDVGSERFSSGSR----GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGK---- 156 (261)
Q Consensus 86 ~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~---- 156 (261)
. |.+..+.|++++...... ........+. .+.|.|.++..+| |.|+|.|.|..+..... ..+.+...
T Consensus 159 ~~P~~~~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~--~~v~~~~~~~~~ 234 (457)
T 1hzh_H 159 YFPEPVTVSWNSGALTSGVH-TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD--KKAEPKSCDKTH 234 (457)
T ss_dssp BBSCCCEEEETTTTBCTTEE-EEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE--EECCCCCSCSSC
T ss_pred EeCCCeEEEEEeCCEeccce-EcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee--EEecccCCCccc
Confidence 7 433489999876421110 0011111111 2368999999989 99999999976654432 22222110
Q ss_pred -----C-----CCCCcceEE-------eecCCeEEEEeecCCCCCCCe---EEEEEEEeCCccce--eEEEecCCCCcEE
Q psy11549 157 -----P-----QPPQNCSVR-------NETTSSVHISCTPGYDGGLPQ---TFTLELYSASDLNL--LVNLTNLDTPAFT 214 (261)
Q Consensus 157 -----p-----~~p~~~~v~-------~~~~~~~~l~c~~~~~~~~p~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 214 (261)
| .+|. +.+. ...|+.+.|.|.+ .+..|. ..+.|+++...... ...........+.
T Consensus 235 ~~~~~~~~~~~~~p~-v~~~~p~~~~~~~~G~~v~L~C~~--~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~ 311 (457)
T 1hzh_H 235 TCPPCPAPELLGGPS-VFLFPPKPKDTLMISRTPEVTCVV--VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYR 311 (457)
T ss_dssp SCCSCCCCCCSSSCE-EEEECCCHHHHHCTTSCCCEEEEE--ECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEE
T ss_pred ccCCCCCccccCCce-EEeECcCchhhcccCCceEEEEEE--EcccCCCCceEEEEEeCCccccccccccceecCCCcEE
Confidence 0 0121 1111 1348999999997 343332 13444454322211 1111112223444
Q ss_pred EcC---CCCCC---ccEEEEEEEEEcCCCcCC
Q psy11549 215 LED---LGLDG---TVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 215 i~~---~~l~~---~~~Y~~~~~a~N~~G~~~ 240 (261)
+.. +...+ +|.| +|.|.|..+...
T Consensus 312 ~~~~l~i~~~d~~d~G~Y--~C~a~n~~~~~~ 341 (457)
T 1hzh_H 312 VVSVLTVLHQDWLNGKEY--KCKVSNKALPAP 341 (457)
T ss_dssp EEEEECCCHHHHHHTCCE--EEEEECTTSSSC
T ss_pred EEEEEEECHHHccCCCcE--EEEEeCCCCCCc
Confidence 432 22344 8999 999998866543
No 151
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.77 E-value=7.7e-17 Score=137.75 Aligned_cols=237 Identities=13% Similarity=0.033 Sum_probs=158.9
Q ss_pred CCCeeccCCCCceEEE----ECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcE
Q psy11549 2 AGGIPLAHNTSARIIL----SNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESV 77 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~ 77 (261)
|||++|..+. .... ..++|.|.+++.+|+|.|+|.|.|..|...+..+.|.|..+|.....+.. .......+
T Consensus 203 ~~g~~l~~~~--~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~--~~~~~~~v 278 (731)
T 2v5y_A 203 IDVRDAPLKE--IKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQL--ASVGATYL 278 (731)
T ss_dssp SSSCCEEEEE--EEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEE--EEECSSCE
T ss_pred CCCccccccc--eEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcce--eccCCceE
Confidence 6787775321 1111 12589999999999999999999999984466788999988876544432 23356788
Q ss_pred EEEEEEeeCC--CCc---eeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE--cCCceEEeeEEEE
Q psy11549 78 DIHCAVEADP--PAR---SFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ--NAIGTQVTPCLYQ 150 (261)
Q Consensus 78 ~l~C~~~~~~--~~~---~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~--~~~~~~~~~~~~~ 150 (261)
.|.|...... .+. .+.|...+. . ...........+.|.++...+.+.|+|.|. |..|....+..+.
T Consensus 279 ~l~w~~~~~~g~~~i~~Y~v~~~~~~~--~-----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~ 351 (731)
T 2v5y_A 279 WIQLNANSINGDGPIVAREVEYCTASG--S-----WNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALR 351 (731)
T ss_dssp EEECCCSSBSSCSCCCEEEEEEEESSS--S-----CEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEE
T ss_pred EEEeCCcccCCCCccEEEEEEEEECCC--C-----ceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEE
Confidence 8888764321 111 355544321 1 111111223478999999999999999999 8887654322232
Q ss_pred E--EeCCCCCCCCcceEEeecCCeEEEEeecCCC---CCCCeEEEEEEEeCCccce-eE-E---EecCCCCcEEEcCCCC
Q psy11549 151 V--VLAGKPQPPQNCSVRNETTSSVHISCTPGYD---GGLPQTFTLELYSASDLNL-LV-N---LTNLDTPAFTLEDLGL 220 (261)
Q Consensus 151 v--~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~---~~~p~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~i~~~~l 220 (261)
+ ....+|.+|.++.+.......+.|+|.++.. .+....|.+.|+....... .+ . ........++|.+ |
T Consensus 352 ~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L 429 (731)
T 2v5y_A 352 TRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITN--L 429 (731)
T ss_dssp EECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECS--C
T ss_pred eeecCCCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECC--C
Confidence 3 3345667898888888889999999997432 1223468888776543221 11 1 2224457899999 9
Q ss_pred CCccEEEEEEEEEcCCCcCCceeeeeeeeccc
Q psy11549 221 DGTVLMRVVISGVNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 221 ~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~ 252 (261)
.+++.|.|+|.|.|..|.+. |..+.+++...
T Consensus 430 ~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~ 460 (731)
T 2v5y_A 430 SPYTNVSVKLILMNPEGRKE-SQELIVQTDED 460 (731)
T ss_dssp CSSCEEEEEEEEECSSCEEE-CCCEEEECCCC
T ss_pred CCCCEEEEEEEEEcCCCCCC-CceEEEEccCC
Confidence 99999999999999999985 66666665443
No 152
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.77 E-value=4.1e-18 Score=121.11 Aligned_cols=159 Identities=12% Similarity=0.069 Sum_probs=102.3
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+.+|++++|.|.+.+ +.+ .+.|++++.. . . .....|.|.++..+|+|.|+|.+.|..+....+..+
T Consensus 18 ~v~~G~~v~L~C~~~~-~~~-~~~W~k~g~~--------~-~--~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~ 84 (184)
T 2gi7_A 18 LVPLEKPVTLRCQGPP-GVD-LYRLEKLSSS--------R-Y--QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQL 84 (184)
T ss_dssp EEETTCCEEEEEECST-TCS-EEEEEETTTC--------C-E--ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCE
T ss_pred cccCCCcEEEEEeCCC-CCC-EEEEEECCcc--------c-c--CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCE
Confidence 4779999999999887 555 8999998743 0 1 123379999999999999999999977643322234
Q ss_pred EEEeCCCCCCCCcce---EEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 150 QVVLAGKPQPPQNCS---VRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 150 ~v~~~~~p~~p~~~~---v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
.+.+...+.+|.... .....|+.++|.|.+ .+.|..+.|+ ++......... .......|.|.+++.+|.|.|
T Consensus 85 ~l~V~~~~~~p~i~~~p~~~v~~G~~v~l~C~~---~~~~~~~~w~-k~g~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y 159 (184)
T 2gi7_A 85 ELVATGVFAKPSLSAQPGPAVSSGGDVTLQCQT---RYGFDQFALY-KEGDPAPYKNP-ERWYRASFPIITVTAAHSGTY 159 (184)
T ss_dssp EEEEESSSCCCEEEEECCCSSCCTTCEEEEEEC---SSCCCEEEEE-ECCCCTTSCCC-CEEEEESSSEEEETTCCSEEE
T ss_pred EEEecCcCCCCEEEeCCCceecCCCcEEEEEEc---CCCCcEEEEE-ECCCcCcceec-CCCceEEEEEccCCccCCeEE
Confidence 444433332222110 112359999999996 2344555544 44332211110 011235678888889999999
Q ss_pred EEEEEEEcCCC---cCCceeeeeee
Q psy11549 227 RVVISGVNAKG---RSLPVIWDDFS 248 (261)
Q Consensus 227 ~~~~~a~N~~G---~~~~s~~~~~~ 248 (261)
+|.|.|..+ .++.|..+.+.
T Consensus 160 --~C~a~n~~~~~~~s~~S~~~~l~ 182 (184)
T 2gi7_A 160 --RCYSFSSRDPYLWSAPSDPLELV 182 (184)
T ss_dssp --EEEEECTTSTTBCCCCCCCEEEE
T ss_pred --EEEEEeCCCCcccCCCCCcEEEE
Confidence 999999875 45566666553
No 153
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.77 E-value=4.7e-18 Score=123.04 Aligned_cols=172 Identities=16% Similarity=0.211 Sum_probs=112.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc---------ccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL---------DVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
+.+.+|+.+.|.|.+.+.|.+ .+.|++++..... .....++.... ..|.|.++..+|+|.|+|.+.+.
T Consensus 14 ~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~ 90 (209)
T 1nbq_A 14 VRIPENNPVKLSCAYSGFSSP-RVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP--TGITFKSVTREDTGTYTCMVSEE 90 (209)
T ss_dssp CCEETTCCCEEECEEESCSSE-EEEEEEEETTEEEESEETTEECTTTTTTCEEET--TEEECSCCCTTSCSEEEEEEEET
T ss_pred eEEEcCCCEEEEEEEeCCCCc-EEEEEEcCCceeEEEEecCccCccccCceEeec--cEEEEeeCCHHHCcEEEEEEecC
Confidence 567899999999999988766 8999997643100 01112222222 47999999999999999999998
Q ss_pred CceEEeeEEEEEEeCCCCCCCCcc-eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE----------EEecC
Q psy11549 140 IGTQVTPCLYQVVLAGKPQPPQNC-SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV----------NLTNL 208 (261)
Q Consensus 140 ~~~~~~~~~~~v~~~~~p~~p~~~-~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~----------~~~~~ 208 (261)
.+.......+.+.+..+|..+... ......|+.+.|.|.+ ..+.|.....|++......... .....
T Consensus 91 ~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~--~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (209)
T 1nbq_A 91 GGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSE--QDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNP 168 (209)
T ss_dssp TSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCC--CSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCT
T ss_pred CCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeC--CCCCCCceeEEEECCeeCCCccccceeeeccceEEcC
Confidence 653333335555565666543221 1223569999999995 3445544344445433221100 00112
Q ss_pred CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 209 DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 209 ~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
....|.|.++..+|.|.| +|.|.|..|....+..+.+
T Consensus 169 ~~~~L~i~~~~~~d~G~Y--~C~a~n~~g~~~~s~~v~l 205 (209)
T 1nbq_A 169 TTGELVFDPLSASDTGEY--SCEARNGYGTPMTSNAVRM 205 (209)
T ss_dssp TTCCEEESSCCGGGCCCE--EEEEECSSSCCEECCCBCC
T ss_pred CcceEEEEeccccCCeEE--EEEEeCCcCcccccccEEE
Confidence 457899999999999999 9999999998855554444
No 154
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.77 E-value=8.1e-19 Score=137.19 Aligned_cols=146 Identities=18% Similarity=0.253 Sum_probs=79.3
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCC-Ccc--eeeeEEEEEEe------eceeecCceeE-EE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTK-GEA--TSNQLKLRVKY------APICKSDRIVI-VG 70 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~-~~~--~s~~~~l~V~~------~p~~~~~~~~~-~~ 70 (261)
||||++|... ......+..|.|.+++.+|+|.|+|.|.|.. |.. .+..+.|.|.. +|.+..+.... ..
T Consensus 160 ~k~~~~l~~~--~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~ 237 (349)
T 4dep_C 160 YMGCYKIQNF--NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYE 237 (349)
T ss_dssp EETTEECCSC--SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC---------
T ss_pred eeCCEECCCc--cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEE
Confidence 5788888532 3455566789999999999999999999986 443 35667777765 45555444321 26
Q ss_pred eeCCCcEEEEEEEee----CCCCceeEEEEcCCccccccCCceEEe---------CC--ceeEEEEecCCCCcC-eEEEE
Q psy11549 71 ASRSESVDIHCAVEA----DPPARSFKWKFNNSGETLDVGSERFSS---------GS--RGSMLRYTPVTELDY-GTLSC 134 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~----~~~~~~~~W~~~~~~~~~~~~~~~~~~---------~~--~~~~l~i~~~~~~d~-g~y~C 134 (261)
+..|+.+.|.|.+.+ .|.+ .+.|++++.... ....++.. .. ..+.|.|.++..+|. |.|+|
T Consensus 238 v~~G~~v~l~C~~~~~~~g~p~p-~v~W~~~g~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C 314 (349)
T 4dep_C 238 KEPGEELLIPCTVYFSFLMDSRN-EVWWTIDGKKPD--DITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314 (349)
T ss_dssp -------CCCEEEEECCCTTCCC-EEEEESSCC----------CCCCEEEECCTTCCEEEEECC-------------CEE
T ss_pred EecCCcEEEEEEEEEccCCCCCC-EEEEEECCEEcc--ccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEE
Confidence 789999999999995 4556 899999874321 10111111 11 133599999999999 99999
Q ss_pred EEEcCCceEEeeEEEEE
Q psy11549 135 AAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v 151 (261)
.|.|..|.......+.+
T Consensus 315 ~a~N~~G~~~~~~~l~v 331 (349)
T 4dep_C 315 HARSAKGEVAKAAKVKQ 331 (349)
T ss_dssp EEECSSCEEEEECC---
T ss_pred EEEcCCCcEEEEEEEee
Confidence 99999998877544444
No 155
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.77 E-value=1.6e-18 Score=123.69 Aligned_cols=131 Identities=18% Similarity=0.190 Sum_probs=90.0
Q ss_pred CCCCeeccCCCC-ceEEEECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEe---eceeecCceeEEEeeCCC
Q psy11549 1 MAGGIPLAHNTS-ARIILSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKY---APICKSDRIVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~ 75 (261)
||||.++..... ......+++|.|.+++.+|+|.|+|.+.|..+. ..+..+.|.|.. +|.+...+. ..+.+|+
T Consensus 37 ~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~--~~v~~G~ 114 (188)
T 1oll_A 37 HFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPG--PEVISGE 114 (188)
T ss_dssp EETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESC--SEEETTC
T ss_pred EECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCC--CccccCC
Confidence 467776642111 111223468999999999999999999886543 235567888864 454443221 3467999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
.++|.|.+.+. ++ .+.|++++..... ..........|.|.++..+|+|.|+|.|.|..
T Consensus 115 ~v~L~C~~~~~-~~-~~~w~k~g~~~~~-----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 115 KVTFYCRLDTA-TS-MFLLLKEGRSSHV-----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEEEEECSSS-CS-EEEEEEESSSCEE-----EEEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred EEEEEEEcCCC-CC-EEEEEECCccccc-----cccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 99999998764 34 8999998743221 11233445689999999999999999998753
No 156
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.76 E-value=8.5e-18 Score=121.59 Aligned_cols=170 Identities=10% Similarity=0.043 Sum_probs=105.5
Q ss_pred EEeeCCCcEEEEEEEee-CCCCceeEEEEcCCccccccCCceEEeCC--ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 69 VGASRSESVDIHCAVEA-DPPARSFKWKFNNSGETLDVGSERFSSGS--RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~-~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
..+.+|+.+.|.|.+.. .|.| .+.|++++.. .......++.... ....|.|.++..+|+|.|+|.|.|. ....
T Consensus 12 ~~v~eg~~v~l~c~~~~~~P~p-~i~W~kng~~-l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng--~a~~ 87 (207)
T 3rbs_A 12 VEILEKGQVRFWMQAEKLSGNA-KVNYIFNEKE-IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG--KATN 87 (207)
T ss_dssp EEECGGGCEEEEEECSCCCSCC-EEEEEETTEE-ECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEET--TEEE
T ss_pred eEEEeCCeEEEEEEEecCCCCC-EEEEEECCEE-CccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECC--CeEE
Confidence 67889999999999975 4556 8999998842 2122223333333 4557999999999999999999993 3333
Q ss_pred eEEEEEEe-------------------CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEE-
Q psy11549 146 PCLYQVVL-------------------AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNL- 205 (261)
Q Consensus 146 ~~~~~v~~-------------------~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~- 205 (261)
...+.+.. ..+|.-...+......|..+.|.|.+ .+..|..-+.|+++..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v--~g~~P~p~i~W~k~g~~l~~~~~~~ 165 (207)
T 3rbs_A 88 HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKV--ANIKKETHIVWYKDEREISVDEKHD 165 (207)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEE--ESCCTTCEEEEEETTEEECCCCCCC
T ss_pred EEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEE--eCCCCCCEEEEEECCEECCCCCceE
Confidence 21221110 01221111112344569999999997 444243333444543222111001
Q ss_pred ecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeee
Q psy11549 206 TNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 206 ~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~ 246 (261)
.......|.|.+++.+|.|.| +|.|.|.+|....+..+.
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~Y--~C~a~N~~G~~~~~~~L~ 204 (207)
T 3rbs_A 166 FKDGICTLLITEFSKKDAGIY--EVILKDDRGKDKSRLKLV 204 (207)
T ss_dssp CSSEEEEEEETTCCGGGCEEE--EEEEEETTEEEEEEEEEC
T ss_pred cCCCEEEEEECCCCcccCEEE--EEEEEcCCCEEEEEEEEe
Confidence 111223599999999999999 999999999877665543
No 157
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.76 E-value=1.7e-18 Score=124.92 Aligned_cols=135 Identities=15% Similarity=0.169 Sum_probs=93.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCC--ceeEEEEc
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPA--RSFKWKFN 97 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~~W~~~ 97 (261)
++|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|..+|........ ..+..|+.++|.|.+.+.+++ .++.|+++
T Consensus 54 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~-~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~ 131 (202)
T 1vca_A 54 STLTMNPVSFGNEHSYLCTATCESRKL-EKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKG 131 (202)
T ss_dssp EEEEESSCCGGGCSEEEEEEEETTEEE-EEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEET
T ss_pred cEEEECcCCHHHCEEEEEEEEECCceE-eeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeC
Confidence 479999999999999999999998765 67889999877653322222 447799999999999986542 37999998
Q ss_pred CCccccccCCceEE-----eCCceeEEEEecCCCCcCeEEEEEEEcCCceE-----EeeEEEEEEeCCCCC
Q psy11549 98 NSGETLDVGSERFS-----SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQ-----VTPCLYQVVLAGKPQ 158 (261)
Q Consensus 98 ~~~~~~~~~~~~~~-----~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-----~~~~~~~v~~~~~p~ 158 (261)
+.. +........ .......|.|.....+|.|.|+|.|.|..+.. .....+.+.|..+|.
T Consensus 132 ~~~--l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 132 DHL--MKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp TEE--EEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred CeE--CcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 742 211110000 01123356788888889999999999987652 123355566666654
No 158
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.76 E-value=9.4e-18 Score=121.78 Aligned_cols=184 Identities=16% Similarity=0.177 Sum_probs=111.5
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccC---CceEEeCCce---eEEEEecCCCCcCe
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVG---SERFSSGSRG---SMLRYTPVTELDYG 130 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~---~~~~~~~~~~---~~l~i~~~~~~d~g 130 (261)
.+|.+...+.. +.+.+|+.+.|.|.+.+.|.+ .+.|++++........ ..+....... ..+.|.++..+|+|
T Consensus 8 ~pp~i~~~p~~-~~v~~G~~v~l~C~~~~~p~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 8 FPPRIVEHPSD-LIVSKGEPATLNCKAEGRPTP-TIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp EEEEEEECCCC-EEECTTCCEEECCEEEEESCC-EEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred CCcceecCCCc-eEEeCCCcEEEEEEcCCCCCC-EEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 45555554444 678899999999999988887 8999998743221111 1122222221 12344567899999
Q ss_pred EEEEEEEcCCceEE-eeEEEEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEec
Q psy11549 131 TLSCAAQNAIGTQV-TPCLYQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTN 207 (261)
Q Consensus 131 ~y~C~~~~~~~~~~-~~~~~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 207 (261)
.|+|.+.+..+... ....+.+....++. .|... ....|+.+.|.|.+ ..+.|.....|+++............
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~--~~~~g~~~~l~C~~--~~~~p~~~v~W~~~~~~l~~~~~~~~ 161 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDV--MVAVGEPAVMECQP--PRGHPEPTISWKKDGSPLDDKDERIT 161 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCE--EEETTSCEEEECBC--CCEESCCEEEEEETTEEECTTSTTEE
T ss_pred EEEEEEECCCCceeecceEEEEEeccccceeCCCce--EecCCCcEEEEEec--CCCCCCCEEEEEECCccCCCCcceEE
Confidence 99999999877653 33344444322221 23333 33569999999996 34444333344444322110000000
Q ss_pred CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCce-eeeeee
Q psy11549 208 LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPV-IWDDFS 248 (261)
Q Consensus 208 ~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s-~~~~~~ 248 (261)
.....|.|.+++..|.|.| +|.|.|..|..... ..+.+.
T Consensus 162 ~~~~~L~i~~~~~~d~G~Y--~C~a~N~~g~~~s~~~~l~V~ 201 (212)
T 2v9r_A 162 IRGGKLMITYTRKSDAGKY--VCVGTNMVGERESEVAELTVL 201 (212)
T ss_dssp EETTEEEESSCCGGGCEEE--EEEEEETTEEEECCCEEEEEE
T ss_pred ccCCeEEEeeCCHhhCeeE--EEEEecccCceecceEEEEEE
Confidence 1236899999999999999 99999999975443 445554
No 159
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.76 E-value=3.3e-17 Score=120.27 Aligned_cols=129 Identities=12% Similarity=0.196 Sum_probs=84.2
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEEEEcC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKWKFNN 98 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W~~~~ 98 (261)
.+|.|.+++.+|+|.|+|.|.|..+.. . ..+.+...+........ ..+..|+.+.|.|.+.+. |.| .+.|++++
T Consensus 83 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~-~--~~v~~~~~~~~~~~~~~-~~~~~g~~v~l~c~~~g~~P~p-~i~W~k~~ 157 (226)
T 4f80_A 83 AALRIHNVTASDSGKYLCYFQDGDFYE-K--ALVELKVAALGSDLHVD-VKGYKDGGIHLECRSTGWYPQP-QIQWSNNK 157 (226)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEE-E--EEEEEEEEBCCCCCEEE-EEEEETTEEEEEEEEEEEBSCC-EEEEECTT
T ss_pred EEEEEeeCchHHCeeEEEEEECCCcEE-E--EEEEEeeccceecccce-eeeccCCceeeEEEeccCCCCC-EEEEEECC
Confidence 379999999999999999999987654 3 34555444443333333 667889999999999985 666 89999865
Q ss_pred CccccccCCceEEeCC--ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCC
Q psy11549 99 SGETLDVGSERFSSGS--RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGK 156 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~ 156 (261)
. ..+........... ....+.+..+..+|.|.|+|.|.|..|..... ..|.+.+|
T Consensus 158 ~-~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~--~~v~v~ep 214 (226)
T 4f80_A 158 G-ENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKT--ASISIADP 214 (226)
T ss_dssp S-CBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEE--EEECCCTT
T ss_pred c-eEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEE--EEEEECCC
Confidence 3 22222222222222 22234455677899999999999999887774 44555443
No 160
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.76 E-value=1.3e-17 Score=121.94 Aligned_cols=131 Identities=17% Similarity=0.249 Sum_probs=85.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
.+|.|.+++.+|+|.|+|.+.+ .+.. ...+.|.|..++........ ..+..|+.+.|.|.+.+.|.| .+.|++++.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~-~~~~-~~~~~l~V~~~~~~~~~~~~-~~~~~g~~v~L~C~~~g~P~p-~i~W~~~~g 155 (222)
T 3sbw_C 80 AALQITDVKLQDAGVYRCMISY-GGAD-YKRITVKVNAPYNKINQRIL-VVDPVTSEHELTCQAEGYPKA-EVIWTSSDH 155 (222)
T ss_dssp EEEEESSCCGGGCEEEEEEEES-SSEE-EEEEEEEEEBCCCCCEEEEE-EEETTTTEEEEEEEEEEBSCC-EEEEEETTC
T ss_pred EEEEEcCcccccCeEEEEEEEe-CCCc-eeEEEEEEECCCCCCCceee-eeecCCCcEEEEEEecCCCCC-eEEEEECCC
Confidence 3899999999999999999998 4443 56788888765543211111 256789999999999998877 899999742
Q ss_pred ccccccCCce-EEe--CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCC
Q psy11549 100 GETLDVGSER-FSS--GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 100 ~~~~~~~~~~-~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p 157 (261)
..+...... ... .+......+..+..+|.|.|+|.|.|..|....... +.+..+|
T Consensus 156 -~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~--l~v~~~p 213 (222)
T 3sbw_C 156 -QVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAE--LVIPELP 213 (222)
T ss_dssp -CEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEE--EECCCC-
T ss_pred -ceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEE--EEecCCc
Confidence 222111111 111 111111222244568999999999999998777444 4444444
No 161
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.76 E-value=5.5e-18 Score=123.32 Aligned_cols=131 Identities=18% Similarity=0.302 Sum_probs=93.4
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
.+|.|.+++.+|+|.|+|.+.+..+........+.+..++...........+..|..+.+.|.+.+.|+| .+.|++++.
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p-~i~W~~~~~ 157 (218)
T 4frw_A 79 GSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP-SVTWDTEVK 157 (218)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC-EEEEEESSC
T ss_pred EEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCc-eEEEEECCc
Confidence 5799999999999999999988776654444555554443322222222556789999999999999988 899999875
Q ss_pred ccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeC
Q psy11549 100 GETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLA 154 (261)
Q Consensus 100 ~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~ 154 (261)
.... ...+.... ..+.|.|.++..+|.|.|+|.|.|..|.......+.|.|.
T Consensus 158 ~~~~---~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~V~ 212 (218)
T 4frw_A 158 GTTS---SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHVS 212 (218)
T ss_dssp CEEE---EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCEE
T ss_pred cccc---CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEEEC
Confidence 3221 11111111 2347999999999999999999999887766556665553
No 162
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=1.4e-18 Score=123.71 Aligned_cols=123 Identities=19% Similarity=0.265 Sum_probs=85.9
Q ss_pred CCCCeeccCCCCceEEEECCeEEEcc-CCCCCCEeEEEEEEeCCCcceeeeEEEEEEe--eceee---------------
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQK-VSRQSAGTYKCSAINTKGEATSNQLKLRVKY--APICK--------------- 62 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~-~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~--~p~~~--------------- 62 (261)
+|||++|..+ .+++|.|.+ ++.+|+|.|+|.|.|..|.. +..+.+.|.. ++...
T Consensus 32 ~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 103 (186)
T 1jbj_A 32 EKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNT-YLYLKARVGSADDAKKDAAKKDDAKKDDAKKD 103 (186)
T ss_dssp EETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCC-CEEECCCCCSCCCCCCCCCCCCCCSCCSSSTT
T ss_pred EECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcE-EEEEEEEEecccccccccccccccccCCcccc
Confidence 5788888643 345899999 99999999999999998874 4444444432 22100
Q ss_pred ----cC---ceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 63 ----SD---RIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 63 ----~~---~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
.. ......+..|+.+.|.|.+ |.| .+.|++++.. +.... .....|.|.++..+|+|.|+|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p-~i~W~k~g~~--i~~~~------~~~~~L~i~~v~~~D~G~Y~C~ 171 (186)
T 1jbj_A 104 GSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDK-TIKWLKDGSI--ISPLN------ATKNTWNLGNNAKDPRGTYQCQ 171 (186)
T ss_dssp CCSCCCCSSCCEECCCSSSCEEEEECSS---SCS-CEEEEETTEE--CCCSS------CCSSCCEEEETTSCCEEEEEEE
T ss_pred ccccccccccccceecCCCCeEEEEeeC---CCC-eEEEEECCEE--CcccC------CCcceEEECCCCcCcCEEEEEE
Confidence 00 0001234489999999998 555 8999998743 21111 1234699999999999999999
Q ss_pred EEcCCceE
Q psy11549 136 AQNAIGTQ 143 (261)
Q Consensus 136 ~~~~~~~~ 143 (261)
|.|..|..
T Consensus 172 a~N~~g~~ 179 (186)
T 1jbj_A 172 GAKETSNP 179 (186)
T ss_dssp ESSCEEEE
T ss_pred EEcCcCCc
Confidence 99987765
No 163
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.76 E-value=2.7e-17 Score=118.75 Aligned_cols=155 Identities=14% Similarity=0.137 Sum_probs=101.5
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+.+|+.+.|.|.+.+.+.+..+.|++++. .+... ...|.|.++..+|+|.|+|.+.|... ...
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~--~l~~~---------~~~L~i~~v~~~D~G~Y~C~a~n~~~--s~~-- 81 (204)
T 3sgj_C 17 YRVLEKDSVTLKCQGAYSPEDQSTQWFHNES--LISSQ---------ASSYFIDAATVDDSGEYRCQTQLSTL--SDP-- 81 (204)
T ss_dssp SEEETTCCEEEEEECCSSSSCCCEEEEETTE--EESCC---------SSEEEESSCCGGGCEEEEEEETTSBC--CCC--
T ss_pred eEEECCCCEEEEEcCCCCCCCcEEEEEECCE--EcccC---------ccEEEEecccccCCEEEEEEeCCCcc--ccc--
Confidence 4577999999999999988775699999874 22111 14799999999999999999987432 232
Q ss_pred EEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 149 YQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 149 ~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
+.+.+..+|. .+....+ ..|+.++|.|.+ .++.|..-..|+++.... .. ......|.|.+++.+|.|.|
T Consensus 82 ~~l~V~~~p~~~~~~~~~v--~~G~~v~L~C~~--~~~~p~~~v~W~k~g~~~--~~---~~~~~~L~i~~v~~~D~G~Y 152 (204)
T 3sgj_C 82 VQLEVHIGWLLLQAPRWVF--KEEDPIHLRCHS--WKNTALHKVTYLQNGKGR--KY---FHHNSDFYIPKATLKDSGSY 152 (204)
T ss_dssp EEEEEECSSEEEECSCSEE--ETTCCEEEEEEE--GGGCCCEEEEEEETTEEE--EE---EEECCCEEESSCCGGGCEEE
T ss_pred EEEEEecCceEecCCceeE--eCCCcEEEEEEe--cCCCCCceEEEEECCcEe--ec---ccCCceEEECcCCcccCEEE
Confidence 3333333332 1112333 459999999997 455554433444443322 11 11247899999999999999
Q ss_pred EEEEEEEcCCCcCCceeeeeeeec
Q psy11549 227 RVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 227 ~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
+|.|.|..+ +..+..+.+...
T Consensus 153 --~C~a~n~~~-~~~s~~~~l~V~ 173 (204)
T 3sgj_C 153 --FCRGLVGSK-NVSSETVQITIT 173 (204)
T ss_dssp --EEEEEETTE-EEECCCEEEEEE
T ss_pred --EEEEEeCCC-ceecCcEEEEEe
Confidence 999999544 223333333333
No 164
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.75 E-value=3.8e-17 Score=132.99 Aligned_cols=210 Identities=12% Similarity=0.082 Sum_probs=118.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe------------------eceeecCceeEEEeeCCCcEEEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY------------------APICKSDRIVIVGASRSESVDIHCA 82 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~------------------~p~~~~~~~~~~~~~~g~~~~l~C~ 82 (261)
.|.|.++..+|+|.|+|.|.|..+...+..+.|.|.. +|.+.........+..|+.+.|.|.
T Consensus 191 ~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~ 270 (475)
T 1iga_A 191 QLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCT 270 (475)
T ss_pred EEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEE
Confidence 6889999999999999999998875434444433311 2322111111122578999999999
Q ss_pred EeeCCC--CceeEEEEcCCccccccCCceEE-e-C---CceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE-EeC
Q psy11549 83 VEADPP--ARSFKWKFNNSGETLDVGSERFS-S-G---SRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV-VLA 154 (261)
Q Consensus 83 ~~~~~~--~~~~~W~~~~~~~~~~~~~~~~~-~-~---~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v-~~~ 154 (261)
+.+.++ +..+.| .++ . .......... . . ...+.|.|.++..+|.|.|+|.|.|..+.......+.+ .+.
T Consensus 271 ~~g~~p~~~~~i~W-~~~-~-~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~ 347 (475)
T 1iga_A 271 LTGLRDASGVTFTW-TPS-S-GKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNT 347 (475)
T ss_pred EEcccCCCceEEEE-CCC-C-cCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCC
Confidence 998754 248999 332 1 1111110000 0 1 12346999999999999999999998876543322222 112
Q ss_pred CCCC----CCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCcccee-E-E--EecC---CC------CcEEEc
Q psy11549 155 GKPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLL-V-N--LTNL---DT------PAFTLE 216 (261)
Q Consensus 155 ~~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~-~-~--~~~~---~~------~~~~i~ 216 (261)
.+|. ++....+ ..|..+.|.|.+ .+..|. ..+.|+++....... . . .... .. ..+.|.
T Consensus 348 ~~P~v~~~~~~~~~v--~~g~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~ 423 (475)
T 1iga_A 348 FRPEVHLLPPPSEEL--ALNELVTLTCLA--RGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVA 423 (475)
T ss_pred CCCeEEEECCChHHh--ccCCceEEEEEE--eeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEC
Confidence 2232 1111111 247889999997 444443 233444443221111 0 0 0111 11 234555
Q ss_pred CCCCCCccEEEEEEEEEcCCCcC
Q psy11549 217 DLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 217 ~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
.....++|.| +|.|.|.....
T Consensus 424 ~~~~~~~g~Y--tC~a~n~~l~~ 444 (475)
T 1iga_A 424 AEDWKKGDTF--SCMVGHEALPL 444 (475)
T ss_pred hHHhcCCCEE--EEEEEcCCCCC
Confidence 5445678999 99999988653
No 165
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.75 E-value=1.3e-16 Score=122.93 Aligned_cols=168 Identities=16% Similarity=0.159 Sum_probs=117.1
Q ss_pred EEeeCCCcEEEEEEEeeC-----CCCceeEEEEcCCccccccCCceEEeCCc-eeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 69 VGASRSESVDIHCAVEAD-----PPARSFKWKFNNSGETLDVGSERFSSGSR-GSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~-----~~~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
..+..|++++|.|.+.+. +.+ .+.|++++. .+.....+....+. .+.|.|.++...|+|.|.|.+.+..+.
T Consensus 10 ~~v~~G~~v~l~C~~~~~~~~~~~~~-~i~W~~~g~--~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 10 PIVHLGDPITASCIIKQNCSHLDPEP-QILWRLGAE--LQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SEECTTCCEEEEECCCTTSCSSCSCS-CCEEESSSC--BCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSEE
T ss_pred cEEcCCCCEEEEEEECCCCCCCCccc-ceEEEeCCE--ECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCce
Confidence 346799999999999986 345 799998874 22211111112222 257999999999999999988764443
Q ss_pred EEeeEEEEEEeCCCCCCCCcceEEee-cCCeEEEEeecCCCCCCCeEEEEEEEeCCcc----ceeE-EE-ecCCCCcEEE
Q psy11549 143 QVTPCLYQVVLAGKPQPPQNCSVRNE-TTSSVHISCTPGYDGGLPQTFTLELYSASDL----NLLV-NL-TNLDTPAFTL 215 (261)
Q Consensus 143 ~~~~~~~~v~~~~~p~~p~~~~v~~~-~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~----~~~~-~~-~~~~~~~~~i 215 (261)
. ...+.+.+..+|.+|.++..... ....++++|.++.+++.+..|.+.|+..... ...+ .. .......+.+
T Consensus 87 ~--~~~~~l~v~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (313)
T 2d9q_B 87 I--LDQVELRAGYPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSI 164 (313)
T ss_dssp E--EEEEEEEECCCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEE
T ss_pred e--EEEEEEccCCCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEE
Confidence 3 33556777789999998887655 3579999999887777788899988765421 1112 11 1122345666
Q ss_pred cCCCCCCccEEEEEEEEEcCCCcCCc
Q psy11549 216 EDLGLDGTVLMRVVISGVNAKGRSLP 241 (261)
Q Consensus 216 ~~~~l~~~~~Y~~~~~a~N~~G~~~~ 241 (261)
....|.+...|+|+|.|.|.+|.+.+
T Consensus 165 ~~~~L~~~~~Y~f~V~A~N~~G~~~s 190 (313)
T 2d9q_B 165 PRKHLLLYQNMGIWVQAENALGTSMS 190 (313)
T ss_dssp EGGGCCSSSCEEEEEEEEETTEEEEC
T ss_pred CccccccceeEEEEEEEECCCCCccC
Confidence 44348999999999999999998643
No 166
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.75 E-value=5.3e-17 Score=117.81 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=110.0
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
.++.+.|.|.+.+.+++..+.|++++.... ......+...+....|.|.++..+|+|.|+|.+.+..+.... .+.+.
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~--~~~l~ 92 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIR-YSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQK--TVDLS 92 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECC-CCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEE--EEEEC
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEcc-CCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEE--EEEEE
Confidence 678889999998866544899999874221 122223344455567999999999999999999998776665 44443
Q ss_pred eCC--------------------CCC----CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eE--E
Q psy11549 153 LAG--------------------KPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LV--N 204 (261)
Q Consensus 153 ~~~--------------------~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~--~ 204 (261)
+.. .|. .|.. +....|+.+.|.|.+ . +.|.....|+++...... .. .
T Consensus 93 v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~v~~g~~~~l~C~~--~-g~p~p~v~W~~~~~~~~~~~~~~~~ 167 (212)
T 2r15_A 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDV--VTIQEGKALNLTCNV--W-GDPPPEVSWLKNEKALAQTDHCNLK 167 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSE--EEEETTCCEEEEEEE--E-CSSCCEEEEEETTEEECCCSSEEEE
T ss_pred EeeccchhhhccccCcccccccCCCcccccCCCc--EEEccCCeEEEEEEE--c-CCCCceEEEEECCeECccCCCEEEE
Confidence 321 111 2222 333569999999997 3 444333444444322110 11 1
Q ss_pred EecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 205 LTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 205 ~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
........|.|.+++..|.|.| +|.|.|..|....+..+.+..
T Consensus 168 ~~~~~~~~L~i~~~~~~d~G~Y--~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 168 FEAGRTAYFTINGVSTADSGKY--GLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EETTTEEEEEESSCCGGGCEEE--EEEEEETTEEEEEEEEEEEEC
T ss_pred EcCCCEEEEEEcCcchHHCeEE--EEEEEcCCCcEEEEEEEEEEc
Confidence 2212335899999999999999 999999999887777766653
No 167
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=4.8e-18 Score=125.78 Aligned_cols=152 Identities=16% Similarity=0.174 Sum_probs=96.2
Q ss_pred CCCCeeccCCCC-ceEEEECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEe---eceeecCceeEEEeeCCC
Q psy11549 1 MAGGIPLAHNTS-ARIILSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKY---APICKSDRIVIVGASRSE 75 (261)
Q Consensus 1 ~~ng~~l~~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~ 75 (261)
||||.++..... ......++.|.|.+++.+|+|.|+|.+.+..+. ..+..+.|.|.. +|.+...+. ..+.+|+
T Consensus 40 ~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~--~~v~~G~ 117 (242)
T 1p6f_A 40 HFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPG--PEVISGE 117 (242)
T ss_dssp EETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESC--SEEETTC
T ss_pred EECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCC--CccCCCC
Confidence 467766631111 011123458999999999999999999876432 235667888874 444442221 3467999
Q ss_pred cEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC-ceEEeeEEEEEEeC
Q psy11549 76 SVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI-GTQVTPCLYQVVLA 154 (261)
Q Consensus 76 ~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~-~~~~~~~~~~v~~~ 154 (261)
+++|.|.+.+.+ + .+.|++++..... ..........|.|.++..+|+|.|+|.+.+.. .....+..+.+.|.
T Consensus 118 ~vtL~C~~~~~~-~-~~~w~k~g~~~~~-----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 118 KVTFYCRLDTAT-S-MFLLLKEGRSSHV-----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp EEEEEEECTTSC-S-EEEEEECSSSCEE-----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred cEEEEEecCCCC-C-EEEEEECCCccCc-----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 999999987543 3 8999998753221 12233445689999999999999999998853 12222335556665
Q ss_pred CCCCCCC
Q psy11549 155 GKPQPPQ 161 (261)
Q Consensus 155 ~~p~~p~ 161 (261)
.++..|.
T Consensus 191 ~~~~~P~ 197 (242)
T 1p6f_A 191 GDIENTS 197 (242)
T ss_dssp C------
T ss_pred ccCCCCc
Confidence 6555443
No 168
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.75 E-value=3.6e-17 Score=115.59 Aligned_cols=117 Identities=14% Similarity=0.236 Sum_probs=84.2
Q ss_pred CCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcce-eeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCC
Q psy11549 11 TSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEAT-SNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPA 89 (261)
Q Consensus 11 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~-s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 89 (261)
..|.....+++|.|.+++.+|+|.|+|.+.|..|... +..+.|.|..+. .. + . +.. .+..+.|.|.+.+.|.+
T Consensus 57 ~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~--~~-P-~-i~~-~~~~v~L~C~~~~~p~~ 130 (182)
T 1hnf_A 57 KDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERV--SK-P-K-ISW-TCINTTLTCEVMNGTDP 130 (182)
T ss_dssp CTTEEECTTSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCC--CC-C-E-EEE-ETTTTEEEEECSSCSSC
T ss_pred CCeEEECCCCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcC--CC-C-E-EEE-ccCcEEEEeEccCCCCC
Confidence 4567777889999999999999999999999887753 356777776431 11 1 1 222 34479999999988866
Q ss_pred ceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee
Q psy11549 90 RSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 146 (261)
++.|++++.. +.. .. ..+.+.. ..+|.|.|+|.|.|..+.....
T Consensus 131 -~~~W~~~g~~--l~~-------~~--~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~ 174 (182)
T 1hnf_A 131 -ELNLYQDGKH--LKL-------SQ--RVITHKW-TTSLSAKFKCTAGNKVSKESSV 174 (182)
T ss_dssp -EEEEEESSCE--EEE-------ES--SCEEEEC-CSCEEEEEEEEEECSSCEEEEE
T ss_pred -EEEEEECCEE--CCC-------CC--cEEEEec-ccCCCcEEEEEEEeCCCCcEEc
Confidence 8999998742 211 11 1233333 4789999999999999887764
No 169
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.75 E-value=2e-17 Score=127.18 Aligned_cols=141 Identities=12% Similarity=0.136 Sum_probs=96.9
Q ss_pred CCCCeeccCCCCceEEEEC---C--eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE-------------------
Q psy11549 1 MAGGIPLAHNTSARIILSN---Q--SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK------------------- 56 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~---~--~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~------------------- 56 (261)
+|||+++..+.. ..+..+ + +|.|.+++.+|+|.|+|.+.+..... ...+.+.
T Consensus 143 ~~~~~~i~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (312)
T 2y23_A 143 IFNEKEIFEGPK-YKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN---HSTVVLVGDVFKKLQKEAEFQRQEWI 218 (312)
T ss_dssp EETTEEECSSSS-CEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEE---EEEEEECTHHHHHHHHHHHHHHHHHH
T ss_pred EECCEECeeCCc-EEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceE---EEEEEEcchhhhhhcccccccccchh
Confidence 478888875433 333332 2 39999999999999999997654332 2333331
Q ss_pred --eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEE
Q psy11549 57 --YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 57 --~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
.+|.+.... . ..+..|+.+.|.|.+.+.|++..+.|++++.. +.. ..++........|.|.++..+|+|.|+|
T Consensus 219 ~~~~p~~~~~~-~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~--~~~-~~~~~~~~~~~~L~I~~v~~~d~G~Y~C 293 (312)
T 2y23_A 219 RKQGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYKDERE--ISV-DEKHDFKDGICTLLITEFSKKDAGIYEV 293 (312)
T ss_dssp HHHSSEEEEEE-E-EEEETTTEEEEEEEEESCCSSCEEEEEETTEE--EEE-ECCC----CEEEEEECSCSGGGCEEEEE
T ss_pred hccCCceeecc-e-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEE--CCC-CCcEEEECCEEEEEECcCCHHHCEEEEE
Confidence 123333221 2 56789999999999999888768999998742 221 2233333445689999999999999999
Q ss_pred EEEcCCceEEeeEEEE
Q psy11549 135 AAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~ 150 (261)
.|.|..|.......+.
T Consensus 294 ~a~N~~G~~~~~~~l~ 309 (312)
T 2y23_A 294 ILKDDRGKDKSRLKLV 309 (312)
T ss_dssp EEESTTCCEEEEEEEC
T ss_pred EEEcCCCceeeeeEEE
Confidence 9999999888754443
No 170
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.75 E-value=8e-18 Score=118.70 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=95.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+.+|+.+.|.|.+.+.+.+..+.|++++.. +. .....|.|.++..+|+|.|+|.+.+..+... ..
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~--~~---------~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~--~~ 80 (176)
T 1f2q_A 14 NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSL--SE---------ETNSSLNIVNAKFEDSGEYKCQHQQVNESEP--VY 80 (176)
T ss_dssp SEEETTCCEEEECCTTCC----CCEEEETTEE--CS---------CCSSEEEECSCCGGGCEEEEEECTTSSCCCC--EE
T ss_pred cceecCCcEEEEEeCCCCCCcceEEEEECCeE--CC---------CCceEEEEeccceecCEEEEEEcCCcccccc--EE
Confidence 45789999999999998887657999997742 11 1234799999999999999999998654332 24
Q ss_pred EEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 149 YQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 149 ~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
+.+. .++. .+....+ ..|+.+.|.|.+ ..+.|.....|+++.... ........|.|.+++..|.|.|
T Consensus 81 l~V~--~~~~~~~~~~~~~--~~g~~~~l~C~~--~~~~p~~~~~W~~~g~~~-----~~~~~~~~L~i~~v~~~d~G~Y 149 (176)
T 1f2q_A 81 LEVF--SDWLLLQASAEVV--MEGQPLFLRCHG--WRNWDVYKVIYYKDGEAL-----KYWYENHNISITNATVEDSGTY 149 (176)
T ss_dssp EEEE--CSSEEEEESCSEE--ETTSCEEEEEEE--GGGCCEEEEEEEETTEEC-----CSCCCSSEEEESSCCGGGCEEE
T ss_pred EEEe--CcceeecCCccee--eCCCCEEEEEEe--cCCCCceEEEEEECCEEE-----eeecCCCeEEECCCCcccCEEE
Confidence 4443 2221 1111223 469999999997 455665544454533221 1123457899999999999999
Q ss_pred EEEEEEEcCCC
Q psy11549 227 RVVISGVNAKG 237 (261)
Q Consensus 227 ~~~~~a~N~~G 237 (261)
+|.|.|..|
T Consensus 150 --~C~a~n~~~ 158 (176)
T 1f2q_A 150 --YCTGKVWQL 158 (176)
T ss_dssp --EEEEEETTE
T ss_pred --EEEEEeCCc
Confidence 999999754
No 171
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=1.1e-16 Score=118.41 Aligned_cols=173 Identities=14% Similarity=0.095 Sum_probs=107.4
Q ss_pred EeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 70 GASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
.+..|++++|.|.+... +..+.|++++........ ..........|.|.++..+|+|.|+|.+.+..+....+..+
T Consensus 17 ~v~~G~~VtL~C~~~~~--~~~~~w~k~g~~~~~~~~--~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~ 92 (242)
T 1p6f_A 17 MVPKEKQVTICCQGNYG--AVEYQLHFEGSLFAVDRP--KPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLL 92 (242)
T ss_dssp EEETTCCEEEEEECCTT--CCEEEEEETTEEEEEECC--SSCTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCE
T ss_pred ccCCCCcEEEEEeeCCC--CcEEEEEECCCccccccc--cccCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcce
Confidence 46799999999998643 337999998743211101 11112334579999999999999999998764433222234
Q ss_pred EEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 150 QVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 150 ~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
.+.|...+..|... ......|+.++|.|.+ .. .+..|.| +++....... .........|.|.+++..|+|.|
T Consensus 93 ~L~V~~~~~~P~i~~~p~~~v~~G~~vtL~C~~--~~-~~~~~~w-~k~g~~~~~~-~~~~~~~~~l~I~~v~~~d~G~Y 167 (242)
T 1p6f_A 93 DLVVTEMYDTPTLSVHPGPEVISGEKVTFYCRL--DT-ATSMFLL-LKEGRSSHVQ-RGYGKVQAEFPLGPVTTAHRGTY 167 (242)
T ss_dssp EEEEECCSCCCEEEEESCSEEETTCEEEEEEEC--TT-SCSEEEE-EECSSSCEEE-EEECSSEEEEEEEECCGGGCEEE
T ss_pred EEEeecccCCCceEccCCCccCCCCcEEEEEec--CC-CCCEEEE-EECCCccCcc-ccCCCceEEEEeCCCccccCEEE
Confidence 44444332222211 0112469999999997 33 3344544 4544333221 11233457899999999999999
Q ss_pred EEEEEEEcCC-CcCCceeeeeeeecccc
Q psy11549 227 RVVISGVNAK-GRSLPVIWDDFSMSGAH 253 (261)
Q Consensus 227 ~~~~~a~N~~-G~~~~s~~~~~~~~~~~ 253 (261)
+|.|.|.. ..+..|..+++...++.
T Consensus 168 --~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 168 --RCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp --EEEEEEETTEECCCCCCEEEEEEC--
T ss_pred --EEEEECCCCcccCCCCCEEEEEeccC
Confidence 88898874 46677777777665543
No 172
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.74 E-value=1.7e-19 Score=141.02 Aligned_cols=199 Identities=17% Similarity=0.146 Sum_probs=128.5
Q ss_pred CCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceE
Q psy11549 31 SAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERF 110 (261)
Q Consensus 31 D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 110 (261)
|.|.|+|.+.+... .+.+.+..+|.+...+.. ..+.+|+.+.|.|.+.+.|.+ .+.|++++....... ..
T Consensus 136 ~~~~~~C~~~~~l~-----~l~~~~c~~P~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p-~i~W~~~~~~~~~~~---~~ 205 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-----HMPNASCGVPTLKVQVPN-ASVDVGDDVLLRCQVEGRGLE-QAGWILTELEQSATV---MK 205 (347)
T ss_dssp GGGCCCCSSSSCSS-----CCCCTTCCCCEEEEECCS-SCCBTTCCEEEEEEEECSSCC-CCCEEESCCCSSEEE---CC
T ss_pred cccCCCCCCChHHh-----cCCcccCCCCceeccCCc-eEEeCCCcEEEEEEEecCCCC-EEEEEcCCceeeccc---cc
Confidence 67999998876221 122233345555443333 567899999999999998887 899999874321111 11
Q ss_pred EeCCceeEEEEecCCCCcCe-EEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEE
Q psy11549 111 SSGSRGSMLRYTPVTELDYG-TLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTF 189 (261)
Q Consensus 111 ~~~~~~~~l~i~~~~~~d~g-~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~ 189 (261)
........|.|.++..+|+| .|+|.|.|..|.... .+.+.|..+|.. .......|..++|.|.+ .+. |...
T Consensus 206 ~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~--~~~l~V~~~P~i---~~~~~~~g~~v~l~C~~--~g~-P~p~ 277 (347)
T 2ifg_A 206 SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV--SVQVNVSFPASV---QLHTAVEMHHWCIPFSV--DGQ-PAPS 277 (347)
T ss_dssp CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCE--EECCCCBEEEEE---EECCCEESSSEEEEEEE--EEE-SCCE
T ss_pred ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEE--EEEEEEcCCCee---eeccCccCceEEEEEEe--eec-CCCc
Confidence 12334558999999999999 999999999877655 444555444442 11112348999999997 333 4433
Q ss_pred EEEEEeCCccc---eeE-EEec------CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 190 TLELYSASDLN---LLV-NLTN------LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 190 ~~~~~~~~~~~---~~~-~~~~------~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
+.|++...... ... .... .....+.|.+++..|+|.| +|.|.|.+|....+..+.|..
T Consensus 278 i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y--~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 278 LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY--TLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp EEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEE--EEEEEETTEEEEEEEEECSCC
T ss_pred EEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceE--EEEEecCCCceeeEEEEEecC
Confidence 34444422211 011 1111 1134599999999999999 999999999887777776653
No 173
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.74 E-value=3.2e-17 Score=116.44 Aligned_cols=116 Identities=14% Similarity=0.186 Sum_probs=86.6
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
.+|.|.+++.+|+|.|+|.+.|..+ .+.|.|...+. +.. ..+..|+.++|.|.+.+.|.+ .+.|++++.
T Consensus 68 ~~L~i~~v~~~D~G~Y~C~~~~~~~-----~~~l~V~~~~~---~~~--~~v~~g~~~~l~C~~~~~p~~-~v~W~~~~~ 136 (184)
T 2ny1_B 68 FPLIIKNLKIEDSDTYICEVEDQKE-----EVQLLVFGLTA---NSD--THLLQGQSLTLTLESPPGSSP-SVQCRSPRG 136 (184)
T ss_dssp CCEEECSCCGGGCEEEEEEETTEEE-----EEEEEEEEEEE---SSC--SEEETTCCEEEEEECCTTCCC-EEEEECTTS
T ss_pred EEEEEecCCHHHCEEEEEEEEcCCC-----cEEEEEEEecC---CCC--ceeecCCCEEEEEEcCCCCCC-EEEEEeCCC
Confidence 3599999999999999999987642 45677764332 111 346799999999999988777 899998764
Q ss_pred ccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 100 GETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
.. . .....|.|.++..+|+|.|+|.|.|..+.... .+.+.|...|.+
T Consensus 137 ~~---------~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~--~~~l~V~~~p~~ 183 (184)
T 2ny1_B 137 KN---------I--QGGKTLSVSQLELQDSGTWTCTVLQNQKKVEF--KIDIVVLAFQKA 183 (184)
T ss_dssp CE---------E--EESSEEEESSCCGGGCEEEEEEEEETTEEEEE--EEEEEEECCCC-
T ss_pred cc---------c--cCceEEEEecCCcCCCeEEEEEEEECCceEEE--EEEEEEEecCCC
Confidence 21 1 12237999999999999999999998777666 445555565553
No 174
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.74 E-value=2.4e-17 Score=115.50 Aligned_cols=121 Identities=14% Similarity=0.198 Sum_probs=87.8
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
+|||+++... ...+.|.+++.+|+|.|+|.+.+... +..+.|.|..++....... ..+..|+.+.|.
T Consensus 40 ~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~~~~~---s~~~~l~v~~~~~~~~~~~--~~~~~g~~~~l~ 106 (170)
T 3ry4_A 40 FHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTGQTSL---SDPVHLTVLFEWLVLQTPH--LEFQEGETIMLR 106 (170)
T ss_dssp EETTEECTTC--------CSSEEEEECCGGGCEEEEEEETTSBC---CCCEEEEEECCSEEEECSC--SEECTTCCEEEE
T ss_pred EECCeEcccC--------ccceEEEecccccCeEEEEEEeCCCc---eEeEEEEEECCceEecCCC--ceeecCCeEEEE
Confidence 3566666432 34577889999999999999986433 4457888887665544332 346789999999
Q ss_pred EEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceE
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 143 (261)
|.+.+.+++..+.|++++.... .......|.|.++..+|+|.|+|.+.|..|..
T Consensus 107 C~~~~~~p~~~~~W~~~g~~~~---------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 160 (170)
T 3ry4_A 107 CHSWKDKPLVKVTFFQNGKSQK---------FSHLDPTFSIPQANHSHSGDYHCTGNIGYTLF 160 (170)
T ss_dssp EEEGGGCCEEEEEEEETTEEEE---------EESSCCEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred EECCCCCCCceEEEEECCeEcc---------ccCCCCeEEEEeccccCCEEEEEEEEeCcCcc
Confidence 9996555434899999764211 11123469999999999999999999988763
No 175
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.74 E-value=2.1e-16 Score=115.98 Aligned_cols=173 Identities=15% Similarity=0.095 Sum_probs=103.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCC--ceeEEEEcCCcccccc--------------CCceEE-----eCCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPPA--RSFKWKFNNSGETLDV--------------GSERFS-----SGSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~--~~~~W~~~~~~~~~~~--------------~~~~~~-----~~~~~~~l~i~~~~~~ 127 (261)
+.+..|++++|.|.+.+.+.+ ..+.|++++....... ...+.. .......|.|.++..+
T Consensus 14 V~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 93 (226)
T 4f80_A 14 ILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTAS 93 (226)
T ss_dssp EEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchH
Confidence 667899999999999866543 3699998764221100 001111 1223568999999999
Q ss_pred cCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc-ceeE-EE
Q psy11549 128 DYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL-NLLV-NL 205 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~-~~~~-~~ 205 (261)
|+|.|+|.|.|..+.... .+.+.+..++..+. .......|..+.|.|.+ .++.|..-+.|++..+.. .... ..
T Consensus 94 D~G~Y~C~a~n~~~~~~~--~v~~~~~~~~~~~~-~~~~~~~g~~v~l~c~~--~g~~P~p~i~W~k~~~~~~~~~~~~~ 168 (226)
T 4f80_A 94 DSGKYLCYFQDGDFYEKA--LVELKVAALGSDLH-VDVKGYKDGGIHLECRS--TGWYPQPQIQWSNNKGENIPTVEAPV 168 (226)
T ss_dssp GCEEEEEEEEETTEEEEE--EEEEEEEBCCCCCE-EEEEEEETTEEEEEEEE--EEEBSCCEEEEECTTSCBCCCEECCC
T ss_pred HCeeEEEEEECCCcEEEE--EEEEeeccceeccc-ceeeeccCCceeeEEEe--ccCCCCCEEEEEECCceEcCCCceEE
Confidence 999999999998776655 44444433333222 23334569999999997 454454434444433222 1111 11
Q ss_pred ecCCCCcE---EEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 206 TNLDTPAF---TLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 206 ~~~~~~~~---~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.......+ .+..++..|+|.| +|.|.|.+|..+.+..+.+.
T Consensus 169 ~~~~~g~~~v~s~l~v~~~d~G~Y--tC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 169 VADGVGLYAVAASVIMRGSSGEGV--SCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp EECTTSCEEEEEEEEECC----CE--EEEEEETTTTEEEEEEECCC
T ss_pred EECCCCcEEEEEEEEechhcCcEE--EEEEEeCCCCeEEEEEEEEC
Confidence 22222322 2334557899999 99999999987776666553
No 176
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.74 E-value=4.1e-18 Score=121.09 Aligned_cols=116 Identities=19% Similarity=0.201 Sum_probs=83.5
Q ss_pred EECCeEEEccCCCCCCEeEEEEEEeCCCc-ceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeCCCCcee
Q psy11549 17 LSNQSLVLQKVSRQSAGTYKCSAINTKGE-ATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEADPPARSF 92 (261)
Q Consensus 17 ~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~-~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 92 (261)
..+++|.|.+++.+|+|.|+|.+.|..|. ..+..+.|.|.. +|.+...+ . ..+..|++++|.|.+.+.+ + .+
T Consensus 49 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~-~~v~~G~~v~l~C~~~~~~-~-~~ 124 (184)
T 2gi7_A 49 QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-G-PAVSSGGDVTLQCQTRYGF-D-QF 124 (184)
T ss_dssp ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-C-CSSCCTTCEEEEEECSSCC-C-EE
T ss_pred CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-C-ceecCCCcEEEEEEcCCCC-c-EE
Confidence 34578999999999999999999998763 235567788753 34443222 1 3467899999999987654 4 89
Q ss_pred EEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 93 KWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 93 ~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
.|++++..... .. . .......|.|.++..+|+|.|+|.|.|..+
T Consensus 125 ~w~k~g~~~~~--~~-~--~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 125 ALYKEGDPAPY--KN-P--ERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEEECCCCTTS--CC-C--CEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred EEEECCCcCcc--ee-c--CCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 99998753221 11 1 112234688999999999999999999753
No 177
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.74 E-value=1.9e-17 Score=116.70 Aligned_cols=161 Identities=13% Similarity=0.093 Sum_probs=102.2
Q ss_pred EEeeCCCcEEEEEEEee-CCCCceeEEEEcCCccc-------cccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 69 VGASRSESVDIHCAVEA-DPPARSFKWKFNNSGET-------LDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~-~~~~~~~~W~~~~~~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+.+.+|+.+.|.|.... ..+...+.|++++.... ......++...... .|.|.++..+|+|.|+|.+.|..
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g-sL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG-DLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS-CEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC-cEEEcccccccCEEEEEEEEeCC
Confidence 56779999999994322 22333899999873110 00123344442222 49999999999999999999988
Q ss_pred ceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCC
Q psy11549 141 GTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGL 220 (261)
Q Consensus 141 ~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 220 (261)
|.......+.+.+..++..|. +. ..+..+.|.|.+ .+..++.+.| +++.... ... ..+.|..++.
T Consensus 85 g~~~~~~~~~l~V~~~~~~p~---i~-~~~~~v~L~C~~--~g~p~p~i~W-~~~g~~l----~~~----~~~~i~~~~~ 149 (176)
T 1hng_A 85 GTRILNKALDLRILEMVSKPM---IY-WECSNATLTCEV--LEGTDVELKL-YQGKEHL----RSL----RQKTMSYQWT 149 (176)
T ss_dssp CCEEEEEEEEEEEECCCCCCE---EE-EETTTTEEEEEC--SSCSSCEEEE-EETTEEE----EEE----SSSEEEEECS
T ss_pred CCEEEEEEEEEEEeCCCCCCE---EE-ecCCcEEEEEEe--cCCCCcEEEE-EECCEEC----CCC----CcEEEEEEEc
Confidence 876333355666655555443 22 225569999997 4444444444 3432211 111 1244556669
Q ss_pred CCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 221 DGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 221 ~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.|.|.| +|.|.|.+|....+..+.+
T Consensus 150 ~d~G~Y--~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 150 NLRAPF--KCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp CCSSCE--EEEEEETTEEEEEEECCCC
T ss_pred cCCeEE--EEEEEecCCCceecccccC
Confidence 999999 9999999998776665543
No 178
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.74 E-value=8e-17 Score=121.20 Aligned_cols=174 Identities=16% Similarity=0.136 Sum_probs=110.6
Q ss_pred EEeeCCCcEEEEEEEe---eCCCCceeEEEEcCCcccccc---------------CCceEEe----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVE---ADPPARSFKWKFNNSGETLDV---------------GSERFSS----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~---~~~~~~~~~W~~~~~~~~~~~---------------~~~~~~~----~~~~~~l~i~~~~~ 126 (261)
+.+.+|+.+.|.|.+. +.+.+ .+.|++.+....... ...++.. ......|.|.++..
T Consensus 15 ~~v~~G~~v~L~C~~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 93 (268)
T 3mj6_A 15 LRVHVGESVLMGCVVQRTEEKHVD-RVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQK 93 (268)
T ss_dssp EEEETTCCEEECCBCCCSSCCCEE-EEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCG
T ss_pred eEEecCCcEEEEEEeecCCCCceE-EEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCH
Confidence 6788999999999987 44444 799998653211100 0012222 12235799999999
Q ss_pred CcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeEE-
Q psy11549 127 LDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLVN- 204 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~~- 204 (261)
+|+|.|+|.+.+..+.......+.+.+. |..|....+ ..|+.++|.|.+....+.|. .+.|.+...........
T Consensus 94 ~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~~p~~~~v--~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~ 169 (268)
T 3mj6_A 94 ADEGIYTCEIRLKNESMVMKKPVELWVL--PEEPRDLRV--RVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVL 169 (268)
T ss_dssp GGCEEEEEEEEETTCCCEEEEEEEEEEE--CCCCSEEEE--ETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEE
T ss_pred hHCEEEEEEEEecCCcceEEEEEEEEEe--ccCCCcccc--ccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEE
Confidence 9999999999987555444334555543 445554444 56999999999732234444 44444323221110000
Q ss_pred ----------------------Ee---cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 205 ----------------------LT---NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 205 ----------------------~~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
.. ......|.|.+++.+|.|.| +|.|.|..|....+..+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y--~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 170 SYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIY--TCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp EEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEE--EEEEEETTEEEEEEEEEEEEC
T ss_pred EecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEE--EEEEEcCCceEEEEEEEEEEc
Confidence 00 12356899999999999999 999999988777776666643
No 179
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.74 E-value=6.4e-17 Score=113.94 Aligned_cols=144 Identities=16% Similarity=0.164 Sum_probs=97.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+.+|+.++|.|.+.+.+.+..+.|++++.. +. .....|.|.++..+|+|.|+|.+.+..+ .....
T Consensus 17 ~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~--~~---------~~~~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~ 83 (175)
T 1fnl_A 17 YSVLEKDSVTLKCQGAYSPEDNSTQWFHNESL--IS---------SQASSYFIDAATVNDSGEYRCQTNLSTL--SDPVQ 83 (175)
T ss_dssp SEEETTCCEEEEEECCCBTTBCCCEEEETTEE--EE---------SSCSEEEESSCCGGGCEEEEEECSSSCC--CCCEE
T ss_pred eeeeCCCcEEEEeeCCCCCCCcceEEEECCEE--cc---------CCceEEEEeCCCcccCEEEEEEeeCCcc--cccEE
Confidence 35779999999999999887645899998732 21 1234799999999999999999998544 23224
Q ss_pred EEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 149 YQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 149 ~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
+.|. .++. .+....+ ..|+.+.|.|.+ .++.|..-..|+++.... .. ......|.|.+++.+|.|.|
T Consensus 84 l~V~--~~~~~~~~~~~~~--~~g~~~~l~C~~--~~~~~~~~~~W~k~g~~~--~~---~~~~~~L~i~~v~~~d~G~Y 152 (175)
T 1fnl_A 84 LEVH--IGWLLLQAPRWVF--KEEDPIHLRCHS--WKNTALHKVTYLQNGKDR--KY---FHHNSDFHIPKATLKDSGSY 152 (175)
T ss_dssp EEEE--CSSEEEECSCSEE--ETTCCEEEEEEE--CTTCCCEEEEEEETTEEE--EE---EEECCCEEESSCCGGGCEEE
T ss_pred EEEe--CCCceeeCCCcee--cCCCCEEEEEEc--CCCCCceEEEEEECCeEc--cC---CCCCCEEEEcccChhhCeEE
Confidence 4443 2221 1112223 459999999997 455554333444433222 11 12347899999999999999
Q ss_pred EEEEEEEcCCCc
Q psy11549 227 RVVISGVNAKGR 238 (261)
Q Consensus 227 ~~~~~a~N~~G~ 238 (261)
+|.|.|..|.
T Consensus 153 --~C~a~n~~~~ 162 (175)
T 1fnl_A 153 --FCRGLVGSKN 162 (175)
T ss_dssp --EEEEEETTEE
T ss_pred --EEEEEcCCCC
Confidence 9999998663
No 180
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.74 E-value=7.2e-18 Score=125.81 Aligned_cols=165 Identities=16% Similarity=0.196 Sum_probs=89.0
Q ss_pred ECCeEEEccCCCCCCEeEEEEEEeCCC----cceeeeEEEEEEee---ceeecCceeEEEeeCCCcEEEEEEEeeCCCCc
Q psy11549 18 SNQSLVLQKVSRQSAGTYKCSAINTKG----EATSNQLKLRVKYA---PICKSDRIVIVGASRSESVDIHCAVEADPPAR 90 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G~Y~C~~~~~~~----~~~s~~~~l~V~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 90 (261)
.++.|.|.+++.+|+|.|+|.+.+... ...+..+.|.|... |.+...+. ..+.+|++++|.|.+.+.+ +
T Consensus 60 ~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~--~~V~~G~~vtL~C~~~~~~-~- 135 (257)
T 1b6u_A 60 SKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG--PTVLAGESVTLSCSSRSSY-D- 135 (257)
T ss_dssp EEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC--TTCBTTCEEEEEEECSSCC-S-
T ss_pred ceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC--CccCCCCEEEEEEeCCCCC-c-
Confidence 346899999999999999999986432 22356678888743 44443322 2467999999999988754 3
Q ss_pred eeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc---eEEeeEEEEEEeCCCCCCC--CcceE
Q psy11549 91 SFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG---TQVTPCLYQVVLAGKPQPP--QNCSV 165 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~---~~~~~~~~~v~~~~~p~~p--~~~~v 165 (261)
.+.|++++....................|.|.++. |+|.|+|.+.+... ....+..+.+.|.++|... .....
T Consensus 136 ~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~~~~ 213 (257)
T 1b6u_A 136 MYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEP 213 (257)
T ss_dssp EEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC----------
T ss_pred EEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCCccc
Confidence 89999987532211111111111224579999998 99999999997532 1222335677777776521 11111
Q ss_pred EeecCCeEEEEeecCCCCCCCeEEEEE
Q psy11549 166 RNETTSSVHISCTPGYDGGLPQTFTLE 192 (261)
Q Consensus 166 ~~~~~~~~~l~c~~~~~~~~p~~~~~~ 192 (261)
....|..+.|.|.. +.+..+++|
T Consensus 214 ~~~~g~~~~l~~~~----~~~~~~~~~ 236 (257)
T 1b6u_A 214 SSETGNPRHLHAAA----EQKLISEED 236 (257)
T ss_dssp ---------------------------
T ss_pred CccCCCeEEEEEEE----cchHHHHHH
Confidence 12347788888875 344444444
No 181
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.74 E-value=3.6e-18 Score=137.87 Aligned_cols=209 Identities=13% Similarity=0.044 Sum_probs=117.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEE------------------Eeecee-ecCceeEEE-eeCCCcEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRV------------------KYAPIC-KSDRIVIVG-ASRSESVDI 79 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V------------------~~~p~~-~~~~~~~~~-~~~g~~~~l 79 (261)
+.|.|.++..+| |.|+|.|.|..+.. .....+.+ ..+|.+ ..++.. .. +..|+.++|
T Consensus 184 s~L~i~~~~~~d-g~Y~C~a~n~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~-~~~~~~G~~~~L 260 (444)
T 1igt_B 184 SSVTVTSSTWPS-QSITCNVAHPASST-KVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKI-KDVLMISLSPIV 260 (444)
T ss_dssp EEEEECSTTTTT-SCCEEEEEETTTTE-EEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCH-HHHHCTTSCCEE
T ss_pred EEEEEchhhcCC-CeEEEEEEeCCCCc-ceEEEeccCCCCcccCCccccCCcccCCCceEEecCCch-hheeecCCCcEE
Confidence 479999999999 99999999998875 22233322 113332 112111 11 468999999
Q ss_pred EEEEeeCC---CCceeEEEEcCCccccccCCceEEeC----CceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 80 HCAVEADP---PARSFKWKFNNSGETLDVGSERFSSG----SRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 80 ~C~~~~~~---~~~~~~W~~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
.|.+.+.+ ++..+.|++++............... ...+.|.|.++..+|.|.|+|.|.|..+.......+.+
T Consensus 261 ~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~- 339 (444)
T 1igt_B 261 TCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISK- 339 (444)
T ss_dssp EEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEEC-
T ss_pred EEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEec-
Confidence 99999874 33489999987421111101011111 12447999999999999999999998776533223322
Q ss_pred eCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE--EEecCCCCc------EEEcCC
Q psy11549 153 LAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV--NLTNLDTPA------FTLEDL 218 (261)
Q Consensus 153 ~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~------~~i~~~ 218 (261)
+.....+|.. .+.. ..+..++|.|.+ .+..|.. .+.|+++........ ......... +.|...
T Consensus 340 ~~~~~~~P~v-~~~~~~~~~~~~~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~ 416 (444)
T 1igt_B 340 PKGSVRAPQV-YVLPPPEEEMTKKQVTLTCMV--TDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKK 416 (444)
T ss_dssp CCCCCBCCEE-EEECCCGGGTTSSEEEEEEEE--EEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHH
T ss_pred cCCCCCCCEE-EEeCCChHHccCCeEEEEEEE--EeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChH
Confidence 1122222321 1111 134459999997 4434443 344445433221111 111122232 233332
Q ss_pred CCCCccEEEEEEEEEcCCC
Q psy11549 219 GLDGTVLMRVVISGVNAKG 237 (261)
Q Consensus 219 ~l~~~~~Y~~~~~a~N~~G 237 (261)
..+++|.| +|.|.|..-
T Consensus 417 ~~~d~g~Y--tC~a~n~~l 433 (444)
T 1igt_B 417 NWVERNSY--SCSVVHEGL 433 (444)
T ss_dssp HHHTCCCE--EEEEECTTS
T ss_pred HhcCCCeE--EEEEECCCc
Confidence 23358999 999999874
No 182
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.73 E-value=4.8e-19 Score=142.56 Aligned_cols=210 Identities=10% Similarity=0.050 Sum_probs=125.3
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKW 94 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W 94 (261)
.+|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.+..+.|
T Consensus 78 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~G~~v~L~C~~~g~~P~p~~v~W 155 (434)
T 1igy_B 78 ANIHLSSLTSDDSAVYYCVREGEVPYW-GQGTTVTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTW 155 (434)
T ss_dssp BCEEECSBCGGGCSEECCCCSSSSCCC-CCCEECEECCSCCBCCCEEEECCC-CCCCCTTEEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEECCCChHHCEEEEEEEEcccccc-CCceEEEEccCCCCCCeEEEcCCc-cccCCCCcEEEEEEEeeecCCCeEEEE
Confidence 389999999999999999998864433 3456777763 3433311111 224689999999999987 54458999
Q ss_pred EEcCCcccccc-----CCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe-----CC--C---CC-
Q psy11549 95 KFNNSGETLDV-----GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL-----AG--K---PQ- 158 (261)
Q Consensus 95 ~~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~-----~~--~---p~- 158 (261)
++++....... ....+.. .+.|.|..+..+| |.|+|.|.|..+.......+.+.. .. . |.
T Consensus 156 ~k~~~~~~~~~~~~~~~~~~~~~---~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v 231 (434)
T 1igy_B 156 NSGSLSSGVHTFPAVLQSDLYTL---SSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSV 231 (434)
T ss_dssp TTTTBCSSEEECCCEECSSCEEE---EEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCE
T ss_pred eeCCcCCCeEecCceecCCcEEE---EEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEE
Confidence 98764211100 0011111 2368899999888 999999999887643322222110 00 0 11
Q ss_pred ---CCCcceEEeecCCeEEEEeecCCCCCCC---eEEEEEEEeCCcccee--E-E--Ee---cCCCCcEEEcCCCCCCcc
Q psy11549 159 ---PPQNCSVRNETTSSVHISCTPGYDGGLP---QTFTLELYSASDLNLL--V-N--LT---NLDTPAFTLEDLGLDGTV 224 (261)
Q Consensus 159 ---~p~~~~v~~~~~~~~~l~c~~~~~~~~p---~~~~~~~~~~~~~~~~--~-~--~~---~~~~~~~~i~~~~l~~~~ 224 (261)
+|.... ....|+.+.|.|.+ .+..| ...+.|++........ . . .. ......|.|.+++..|+|
T Consensus 232 ~~~~p~~~~-~v~~G~~~~L~C~~--~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 308 (434)
T 1igy_B 232 FIFPPKPKD-TLLITVTPKVTCVV--VDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGK 308 (434)
T ss_dssp EEECCCHHH-HHSTTSCCEEEEEE--CCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTC
T ss_pred EEeCCChHH-hcccCCCcEEEEEE--eccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCC
Confidence 111110 02459999999998 34322 2223344433221100 0 0 00 012346888887778999
Q ss_pred EEEEEEEEEcCCCcCC
Q psy11549 225 LMRVVISGVNAKGRSL 240 (261)
Q Consensus 225 ~Y~~~~~a~N~~G~~~ 240 (261)
.| +|.|.|..|...
T Consensus 309 ~Y--~C~a~n~~~~~~ 322 (434)
T 1igy_B 309 EF--KCRVNSAAFPAP 322 (434)
T ss_dssp CC--BCCBCCSSCSSC
T ss_pred cE--EEEEECCCCCCc
Confidence 99 999999999653
No 183
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.73 E-value=7.9e-17 Score=115.83 Aligned_cols=172 Identities=14% Similarity=0.150 Sum_probs=110.7
Q ss_pred EEeeCCCcEEEEEE-EeeCCC-CceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe-
Q psy11549 69 VGASRSESVDIHCA-VEADPP-ARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT- 145 (261)
Q Consensus 69 ~~~~~g~~~~l~C~-~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~- 145 (261)
+.+.+|+.+.|.|. +.+.|. + .+.|++++......... +.........|.|.++..+|+|.|+|.+.+..+....
T Consensus 18 ~~v~~G~~v~L~C~~~~~~p~~~-~v~W~~~~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 95 (201)
T 3s97_C 18 VRVKEGKGMVLLCDPPYHFPDDL-SYRWLLNEFPVFITMDK-RRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVF 95 (201)
T ss_dssp EEEETTCCEEECCCCCSEESSCC-EEEEEESSTTCBCCCSS-SEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEE
T ss_pred EEEECCCCEEEeccccccCCCce-EEEEEECCceeeeeeCC-CeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchh
Confidence 77889999999999 778777 6 89999987533222222 2233333457999999999999999999986554332
Q ss_pred eEEEEEEe--CCC--CCCCCc----ceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcC
Q psy11549 146 PCLYQVVL--AGK--PQPPQN----CSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLED 217 (261)
Q Consensus 146 ~~~~~v~~--~~~--p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 217 (261)
...+.+.+ ... +.+|.. ..+....|..+.|.|.+ .+ .|.....|++........... ......+.|.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~--~g-~p~p~v~W~~~~~~~~~~~~~-~~~~~~L~i~~ 171 (201)
T 3s97_C 96 SKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFA--LG-NPVPDIRWRKVLEPMPSTAEI-STSGAVLKIFN 171 (201)
T ss_dssp CCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEE--EE-ESCCEEEEEETTBCCCTTCEE-ETTTTEEEECS
T ss_pred hcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEc--cC-CCCCceEEEeCCCcCCCceee-cCCCCEEEEcc
Confidence 11222222 111 111110 02333569999999997 33 343334444544322211122 23457899999
Q ss_pred CCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 218 LGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 218 ~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+...|.|.| +|.|.|..|....+..+.+.
T Consensus 172 v~~~d~G~Y--~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 172 IQLEDEGIY--ECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCGGGCEEE--EEEEEETTEEEEEEEEEEEE
T ss_pred CChhhCEEE--EEEEEecCCceeeeEEEEEe
Confidence 999999999 99999999988776666553
No 184
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.73 E-value=2.8e-17 Score=122.40 Aligned_cols=120 Identities=17% Similarity=0.192 Sum_probs=86.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc----eeeeEEEEEEee---ceeecCceeEEEeeCCCcEEEEEEEeeCCCCcee
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA----TSNQLKLRVKYA---PICKSDRIVIVGASRSESVDIHCAVEADPPARSF 92 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~----~s~~~~l~V~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~ 92 (261)
.+|.|.+++.+|+|.|+|.+.+..+.. .+..+.|.|..+ |.+.........+.+|+.+.|.|.+.+.|.| .+
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p-~v 168 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANA-NV 168 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTC-EE
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCC-ee
Confidence 589999999999999999999887643 144678888764 2222222223667789999999999998888 99
Q ss_pred EEEEcCCccccccC---------------------CceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 93 KWKFNNSGETLDVG---------------------SERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 93 ~W~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
.|++++........ ..+.... ....|.|.++..+|+|.|+|.|.|..|
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g 237 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGRVWCELATGQG 237 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEEEEEEEESSSS
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEEEEEEecCCcc
Confidence 99998642211000 0011110 124799999999999999999999554
No 185
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.73 E-value=1.9e-16 Score=118.50 Aligned_cols=119 Identities=18% Similarity=0.303 Sum_probs=82.4
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCc---ceeeeEEEEEEee--------------ceeecCceeEEEeeCCCcEEEEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGE---ATSNQLKLRVKYA--------------PICKSDRIVIVGASRSESVDIHCAV 83 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~---~~s~~~~l~V~~~--------------p~~~~~~~~~~~~~~g~~~~l~C~~ 83 (261)
+|.|.+++.+|+|.|+|.+.|..+. .....+.|.|..+ +.+...+.. ..+.+|++++|.|.+
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~-~~v~~G~~v~L~C~~ 165 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAI-MSASPGEKVTLTCSA 165 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSE-EEECTTCCEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCce-EEEeCCCcEEEEEEE
Confidence 7999999999999999999986221 1234567888754 333333333 678899999999999
Q ss_pred eeCCCCceeEEEEcCCcccccc-----------CCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 84 EADPPARSFKWKFNNSGETLDV-----------GSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 84 ~~~~~~~~~~W~~~~~~~~~~~-----------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
.+.+.+..+.|++...+..... ...++. .......|.|.++..+|+|.|+|.+.+..
T Consensus 166 ~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 235 (257)
T 3gkz_A 166 SSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSF 235 (257)
T ss_dssp SSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred ccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 9877654799998532221110 011222 22345579999999999999999998753
No 186
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.73 E-value=1.6e-16 Score=118.30 Aligned_cols=163 Identities=12% Similarity=0.121 Sum_probs=102.4
Q ss_pred EEeeCCCcEEEEEEEee---CCCCceeEEEEcCCccc----c-----------------------ccCCceEEeCC-cee
Q psy11549 69 VGASRSESVDIHCAVEA---DPPARSFKWKFNNSGET----L-----------------------DVGSERFSSGS-RGS 117 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~---~~~~~~~~W~~~~~~~~----~-----------------------~~~~~~~~~~~-~~~ 117 (261)
+.+.+|+.+.|.|.+.+ .+.+ .+.|++++.... . .....+..... ...
T Consensus 12 v~v~~G~~v~L~C~~~~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 90 (250)
T 2fbo_J 12 VEVHAGGTVELPCSYQLANDTQPP-VISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP 90 (250)
T ss_dssp EEECTTSCEEECCEEEECSCCSCC-EEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSCTTSC
T ss_pred eEEecCCeEEEEEEeEcCCCCCce-EEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEeccCCcc
Confidence 67889999999999987 5556 899998763210 0 00111222211 234
Q ss_pred EEEEecCCCCcCeEEEEEEEcCCceEE---eeEEEEEEeCCCCCCCCc-----ceEEeecCCeEEEEeecCCCCCCCeEE
Q psy11549 118 MLRYTPVTELDYGTLSCAAQNAIGTQV---TPCLYQVVLAGKPQPPQN-----CSVRNETTSSVHISCTPGYDGGLPQTF 189 (261)
Q Consensus 118 ~l~i~~~~~~d~g~y~C~~~~~~~~~~---~~~~~~v~~~~~p~~p~~-----~~v~~~~~~~~~l~c~~~~~~~~p~~~ 189 (261)
.|.|.++..+|+|.|+|.+.+..+... ....+.+.+..+|.+|.. ..+....|..+.|.|.+ .+..++.+
T Consensus 91 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~--~g~p~p~v 168 (250)
T 2fbo_J 91 TLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPC--TDCANANV 168 (250)
T ss_dssp CEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCE--ESCTTCEE
T ss_pred eEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEe--cCCCCCee
Confidence 799999999999999999999766431 122455666555333321 12333469999999997 33333444
Q ss_pred EEEEEeCCccce----e--------------------EEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCC
Q psy11549 190 TLELYSASDLNL----L--------------------VNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKG 237 (261)
Q Consensus 190 ~~~~~~~~~~~~----~--------------------~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G 237 (261)
.| ++....... . ..........|.|.+++.+|.|.| +|.|.|.+|
T Consensus 169 ~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y--~C~a~N~~g 237 (250)
T 2fbo_J 169 TW-YTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRV--WCELATGQG 237 (250)
T ss_dssp EE-EEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEE--EEEEESSSS
T ss_pred EE-EeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEE--EEEecCCcc
Confidence 44 444221110 0 000111236899999999999999 999999776
No 187
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.73 E-value=8.6e-17 Score=120.08 Aligned_cols=119 Identities=18% Similarity=0.214 Sum_probs=84.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---------------eceeecCceeEEEeeCCCcEEEEEEEee
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---------------APICKSDRIVIVGASRSESVDIHCAVEA 85 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~ 85 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|.. +|.+...+.. ..+.+|++++|.|.+.+
T Consensus 81 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v~L~C~~~~ 159 (253)
T 3uzq_A 81 YLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPAS-LAVSLGQRATISCRASE 159 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSE-EEECTTSCEEEEEEESS
T ss_pred EEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCe-EEEeCCCCEEEEEEecC
Confidence 4999999999999999999986655434556777774 2333333332 67889999999999998
Q ss_pred CCCC---ceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 86 DPPA---RSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 86 ~~~~---~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
.+.+ ..+.|++...+.... ....++. .......|.|.++..+|+|.|+|.+.|..
T Consensus 160 ~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 230 (253)
T 3uzq_A 160 NVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEV 230 (253)
T ss_dssp CCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred ccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 7664 479999853222111 0011222 23345579999999999999999999864
No 188
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.73 E-value=1.7e-16 Score=115.81 Aligned_cols=146 Identities=15% Similarity=0.181 Sum_probs=100.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceE-EeeE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQ-VTPC 147 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~-~~~~ 147 (261)
+.+..|+.+.|.|.+.+.|.+ .+.|++++.. +.. .....|.|.++..+|+|.|+|.+.+..+.. ....
T Consensus 28 ~~v~~G~~v~L~C~~~~~p~~-~v~W~~~~~~--~~~--------~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~ 96 (218)
T 3k0w_A 28 KAVLAGQFVKLCCRATGHPFV-QYQWFKMNKE--IPN--------GNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWS 96 (218)
T ss_dssp EEEETTSBEEEECEETTTTSS-EEEEEETTEE--CTT--------CCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCE
T ss_pred eEEeCCCcEEEEeeecCCCCC-EEEEEECCEE--CCC--------CCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEE
Confidence 678899999999999888777 8999998742 211 123479999999999999999999987654 2333
Q ss_pred EEEEEeCC----------C---CC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCC
Q psy11549 148 LYQVVLAG----------K---PQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTP 211 (261)
Q Consensus 148 ~~~v~~~~----------~---p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (261)
.+.+.... + |. .|.. .....|..+.|.|.+ .+..+..+.| ++..... ......
T Consensus 97 ~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~--~~v~~G~~v~L~C~~--~g~p~~~v~W-~~~~~~~------~~~~~~ 165 (218)
T 3k0w_A 97 QLDVCDIPESFQRSVDGVSESKLQICVEPTS--QKLMPGSTLVLQCVA--VGSPIPHYQW-FKNELPL------THETKK 165 (218)
T ss_dssp EEEEECCCGGGCTTCCSBCCSSCEEEECCCC--EEECTTCCEEEECEE--EBSSCCEEEE-EETTEEC------TTCCSS
T ss_pred EEEEEccCcccccccccccCCCceEEECCCc--eeecCCCcEEEEEEe--cccCCCeEEE-EECCEEC------CCCCCC
Confidence 44443221 0 10 1122 233569999999997 3333344444 4432221 122346
Q ss_pred cEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 212 AFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 212 ~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
.|.|.+++..+.|.| +|.|.|..|.
T Consensus 166 ~L~i~~v~~~d~G~Y--~C~a~n~~g~ 190 (218)
T 3k0w_A 166 LYMVPYVDLEHQGTY--WCHVYNDRDS 190 (218)
T ss_dssp EEEESSCCGGGCEEE--EEEEECSSCE
T ss_pred EEEEeecChhcCEEE--EEEEEcCCCC
Confidence 899999999999999 9999999886
No 189
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.73 E-value=6.3e-16 Score=111.81 Aligned_cols=174 Identities=11% Similarity=0.051 Sum_probs=106.7
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-c---------------CCceEEeCCceeEEEEecCCCCcCeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-V---------------GSERFSSGSRGSMLRYTPVTELDYGTL 132 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-~---------------~~~~~~~~~~~~~l~i~~~~~~d~g~y 132 (261)
..+.+|+++.|.|...+.+.+ .+.|++++...... + ...++.... ...|.|.++..+|+|.|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~-~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALG-AFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS-NGSLLFQMITMKDMGVY 86 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCS-EEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECT-TSCEEECSCCGGGCEEE
T ss_pred ceeecCCcEEEEEeCCCCCce-EEEeccCCCCCccceEEEEecCCCccccCccccceeEEec-CCeEEEccccccCCeEE
Confidence 346799999999997776666 89999864311100 0 011222221 23699999999999999
Q ss_pred EEEEEcCCc-eEEeeEEEEEEeCCCCCCCCcceE--EeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce--eEEEec
Q psy11549 133 SCAAQNAIG-TQVTPCLYQVVLAGKPQPPQNCSV--RNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL--LVNLTN 207 (261)
Q Consensus 133 ~C~~~~~~~-~~~~~~~~~v~~~~~p~~p~~~~v--~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~ 207 (261)
+|.+.+..+ .... .+.+.+..++..|..... ....|+.+.|.|.+ .+ .|+.+.|+ +....... .... .
T Consensus 87 ~C~~~~~~~~~~~~--~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~--~~-~pp~i~W~-~~g~~l~~~~~~~~-~ 159 (208)
T 3r4d_A 87 TLDMTDENYRRTQA--TVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLS--ND-IGANIQWL-FNSQSLQLTERMTL-S 159 (208)
T ss_dssp EEEEECSSCEEEEE--EEEEEEECCCCCCEEEESCSSCCTTCCEEEEEEC--SC-TTCEEEEE-ETTEECCCCSSEEE-E
T ss_pred EEEEEcccCceeEE--EEEEEeccCCCCCEEecCCceEeeCCCEEEEEEC--CC-CCCceEEE-ECCEeCCCCCCeEE-c
Confidence 999999853 3333 444555455443321000 03469999999997 33 44455444 33222111 1122 2
Q ss_pred CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccccc
Q psy11549 208 LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 208 ~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
.....|.|.+++..|.|.| +|.|.|.+|... |.++.+....++.
T Consensus 160 ~~~~~L~i~~v~~~d~G~Y--~C~a~N~~g~~~-s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 160 QNNSILRIDPIKREDAGEY--QCEISNPVSVRR-SNSIKLDIIFDPH 203 (208)
T ss_dssp TTTTEEEESSCCGGGCEEE--EEEEECTTCCEE-CCCEEECCC----
T ss_pred CCCCEEEEeccCHHhCeEE--EEEEecCCCccc-CCceeeeEEeCCc
Confidence 2347899999999999999 999999999754 4555555544443
No 190
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.72 E-value=1.6e-16 Score=113.73 Aligned_cols=116 Identities=17% Similarity=0.248 Sum_probs=80.9
Q ss_pred eEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece---eecCceeEEEeeCCC-cEEEEEEEeeCCCC
Q psy11549 14 RIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI---CKSDRIVIVGASRSE-SVDIHCAVEADPPA 89 (261)
Q Consensus 14 ~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~---~~~~~~~~~~~~~g~-~~~l~C~~~~~~~~ 89 (261)
.....+++|+|.+++.+|+|.|+|.+.+..+.. ...+.|.|..++. +.... .....|. .++|.|.+.+.+++
T Consensus 64 ~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~~~~p~i~~~~---~~~~~g~~~v~L~C~~~g~~p~ 139 (193)
T 2if7_A 64 LNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAK-LSSYTLRILRQLRNIQVTNHS---QLFQNMTCELHLTCSVEDADDN 139 (193)
T ss_dssp EEECTTCCEEECSCCGGGCEEEEEEEECSSCEE-EEEEEEEEECCCEEEEEEECC---C---CSSEEEEEEEEEESCCTT
T ss_pred EEECCCeEEEECCCCcccCceEEEEEEecCCCe-EEEEEEEEEccCCCCeEecCc---eeecCCCceEEEEEEEecCCCc
Confidence 334457899999999999999999999988765 4578888875432 22111 1123455 89999999996643
Q ss_pred ceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCC-cCeEEEEEEEcCCceEEe
Q psy11549 90 RSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTEL-DYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~g~y~C~~~~~~~~~~~ 145 (261)
..+.|++++. .+. .+ ..|.|.....+ |.|.|+|.|.|..|....
T Consensus 140 p~i~W~~~g~--~l~--------~~--~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~ 184 (193)
T 2if7_A 140 VSFRWEALGN--TLS--------SQ--PNLTVSWDPRISSEQDYTCIAENAVSNLSF 184 (193)
T ss_dssp CEEEEEETTE--EEE--------SS--SEEEEEECTTTCSCCEEEEEEEETTEEEEE
T ss_pred eEEEEEeCCE--EcC--------CC--CeEEEEeccCcCCCCcEEEEEECCCCcccc
Confidence 4899999763 211 11 14666544454 899999999999987754
No 191
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=129.81 Aligned_cols=145 Identities=20% Similarity=0.330 Sum_probs=103.5
Q ss_pred CCCCeeccCCCCceEEEEC-CeEEEccCCCCCCEeEEEEEEeCCCc---ceeeeEEEEEEe-----eceeecCceeEEEe
Q psy11549 1 MAGGIPLAHNTSARIILSN-QSLVLQKVSRQSAGTYKCSAINTKGE---ATSNQLKLRVKY-----APICKSDRIVIVGA 71 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~-~~L~i~~~~~~D~G~Y~C~~~~~~~~---~~s~~~~l~V~~-----~p~~~~~~~~~~~~ 71 (261)
+|||+++..+..+.....+ ++|.|.+++.+|+|.|+|.|.|..|. ..+..+.|.|.. +|.+..+... ..+
T Consensus 160 ~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~-~~v 238 (339)
T 3o4o_C 160 YKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKT-ISA 238 (339)
T ss_dssp EESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCC-CCC
T ss_pred ecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCce-eEe
Confidence 4788888765555555444 48999999999999999999998764 235677888874 4455544333 567
Q ss_pred eCCCcEEEEEEE---eeCCCCceeEEEEcCCccccc------cCCceEEeCCc-----eeEEEEecCCCCcC-eEEEEEE
Q psy11549 72 SRSESVDIHCAV---EADPPARSFKWKFNNSGETLD------VGSERFSSGSR-----GSMLRYTPVTELDY-GTLSCAA 136 (261)
Q Consensus 72 ~~g~~~~l~C~~---~~~~~~~~~~W~~~~~~~~~~------~~~~~~~~~~~-----~~~l~i~~~~~~d~-g~y~C~~ 136 (261)
..|+.+.|.|.+ .+.|.+..+.|++++...... ....++..... .+.|.|.++..+|. |.|+|.|
T Consensus 239 ~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a 318 (339)
T 3o4o_C 239 SLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVV 318 (339)
T ss_dssp CCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEE
T ss_pred ccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEE
Confidence 889999999999 788844489999877432111 01111121111 22699999999997 9999999
Q ss_pred EcCCceEEee
Q psy11549 137 QNAIGTQVTP 146 (261)
Q Consensus 137 ~~~~~~~~~~ 146 (261)
.|..|.....
T Consensus 319 ~N~~G~~~~~ 328 (339)
T 3o4o_C 319 HNTLSFQTLR 328 (339)
T ss_dssp EETTEEECCB
T ss_pred EeccCceEEE
Confidence 9999987763
No 192
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.72 E-value=4.6e-17 Score=117.33 Aligned_cols=117 Identities=17% Similarity=0.237 Sum_probs=79.2
Q ss_pred ECCeEEEccCCCCCCEeEEEEEEeCC----CcceeeeEEEEEEee---ceeecCceeEEEeeCCCcEEEEEEEeeCCCCc
Q psy11549 18 SNQSLVLQKVSRQSAGTYKCSAINTK----GEATSNQLKLRVKYA---PICKSDRIVIVGASRSESVDIHCAVEADPPAR 90 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G~Y~C~~~~~~----~~~~s~~~~l~V~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~ 90 (261)
.++.|.|.+++.+|+|.|+|.+.+.. ....+..+.|.|... |.+...+. ..+.+|++++|.|.+.+ +.+
T Consensus 61 ~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~--~~v~~G~~v~L~C~~~~-~~~- 136 (201)
T 1nkr_A 61 SKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG--PTVLAGENVTLSCSSRS-SYD- 136 (201)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC--SEECTTCEEEEEEEESS-CCS-
T ss_pred ceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC--CccCCCCeEEEEEeCCC-CCc-
Confidence 35689999999999999999998653 122355678888743 44432222 24679999999999886 344
Q ss_pred eeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 91 SFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
.+.|++++....................|.|.++. |+|.|+|.|.+..
T Consensus 137 ~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 137 MYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred eEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 89999987532211100011111124579999998 9999999998753
No 193
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.72 E-value=1.5e-15 Score=109.33 Aligned_cols=159 Identities=15% Similarity=0.131 Sum_probs=100.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
+.+.+|+.+.|.|.+.+.|.| .+.|++.... . .. ...........|.|.++..+|+|.|+|.|.|..+.... .
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p-~i~W~~~~~~-~--~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~--~ 83 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESP-FFSWRTQIDS-P--LN-GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK--G 83 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSC-EEEEEETTCC-C--CS-SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE--E
T ss_pred EEEcCCCcEEEEEeecCCCCC-eEEEECCCCC-C--cc-ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee--E
Confidence 445699999999999998888 7999874321 1 11 12222333457999999999999999999998776555 4
Q ss_pred EEEEeCCCCCCCCcc-eEEeecCCeEEEEeecCCCCCCCe--EEEEEEEeCCccceeEEEec--------CCCCcEEEcC
Q psy11549 149 YQVVLAGKPQPPQNC-SVRNETTSSVHISCTPGYDGGLPQ--TFTLELYSASDLNLLVNLTN--------LDTPAFTLED 217 (261)
Q Consensus 149 ~~v~~~~~p~~p~~~-~v~~~~~~~~~l~c~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~--------~~~~~~~i~~ 217 (261)
+.+.|..+|..+... ......|+.++|.|.+ .++.|. .-+.|+++....... .... .....+.|..
T Consensus 84 ~~l~V~~~p~~~~~~~~~~~~~G~~~~L~C~~--~~~~p~~~~~i~W~k~~~~l~~~-~~~~~~~~~~~~~~~~~l~i~~ 160 (202)
T 1vca_A 84 IQVEIYSFPKDPEIHLSGPLEAGKPITVKCSV--ADVYPFDRLEIDLLKGDHLMKSQ-EFLEDADRKSLETKSLEVTFTP 160 (202)
T ss_dssp EEEEEEBCCSCCEEEESSCEETTSCEEEEEEE--EEEBSGGGEEEEEEETTEEEEEE-ECCSCCSSCCCEEEEEEEEECC
T ss_pred EEEEEEeCCCCCEeCCceEEcCCCCEEEEEEE--CCcCCCCCeEEEEEeCCeECccc-ccccccCcCcceEEEEEEEEEe
Confidence 555555555433210 0112469999999997 444442 223344443221111 1000 0113345666
Q ss_pred CCCCCccEEEEEEEEEcCCCcC
Q psy11549 218 LGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 218 ~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
...++++.| +|.|.|.+|..
T Consensus 161 ~~~d~~g~y--tC~A~n~~~~~ 180 (202)
T 1vca_A 161 VIEDIGKVL--VCRAKLHIDEM 180 (202)
T ss_dssp CGGGTTCEE--EEEEEECSCCC
T ss_pred eeccCCCeE--EEEEEccccCC
Confidence 666788899 99999999874
No 194
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.72 E-value=8.4e-17 Score=124.76 Aligned_cols=130 Identities=20% Similarity=0.294 Sum_probs=97.5
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNS 99 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~ 99 (261)
..|.|.+++.+|+|.|+|.|.|..+.. +..+.|.|.++|.+.........+..|+.+.|.|.+.+.|.+..+.|++++.
T Consensus 194 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~ 272 (331)
T 3u83_A 194 SRYRLVPSREAHQQSLACIVNYHMDRF-KESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNG 272 (331)
T ss_dssp EEEEECCCGGGTTCEEEEEEEETTEEE-EEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTB
T ss_pred EEEEEEeccccCCCEEEEEEecCCCcc-eeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCC
Confidence 368888889999999999999998775 6788999998887653332224577899999999999999884499999874
Q ss_pred ccccccCCceEEeCCceeEEEEe-cCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 100 GETLDVGSERFSSGSRGSMLRYT-PVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
... .. ..... ..|.|. ++..+|+|.|+|.|.|..|.... .+.+.|...+..
T Consensus 273 ~~~----~~-~~~~~--~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~--~~~l~V~~~~~~ 324 (331)
T 3u83_A 273 SLP----KG-VEAQN--RTLFFKGPINYSLAGTYICEATNPIGTRSG--QVEVNITEAAAL 324 (331)
T ss_dssp SCC----TT-EEEET--TEEEECSCCCGGGCEEEEEEEEETTEEEEE--EEEECCBC----
T ss_pred ccc----cc-ceecC--cEEEEeCCCccccCeEEEEEEEeccccceE--EEEEEEeccchh
Confidence 321 11 11222 369999 89999999999999999998766 555666555543
No 195
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.72 E-value=6.1e-17 Score=120.50 Aligned_cols=131 Identities=16% Similarity=0.184 Sum_probs=84.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEee-CCCCceeEEEEcC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEA-DPPARSFKWKFNN 98 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~W~~~~ 98 (261)
.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+|.+..... .....|+.+.|.|.+.+ .|.+..+.|++++
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~-~~~~~L~V~~~P~v~~~~~--~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g 158 (248)
T 3pv7_A 82 ASLRLPGIQLEEAGEYRCEVVVTPLKA-QGTVQLEVVASPASRLLLD--QVGMKENEDKYMCESSGFYPEAINITWEKQT 158 (248)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEECC----------CEEEEEEEEEBSSCCEEEEEEEC
T ss_pred EEEEeCCCCHHHCeEEEEEEEeCCccc-eeEEEEEEecCCceEEecC--CccccCCCcEEEEEEccEECCCeEEEEEECC
Confidence 359999999999999999999987765 5678899988877654332 22446788889999998 5655589999987
Q ss_pred Cccccc--cCC----ceEEeCC-----ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 99 SGETLD--VGS----ERFSSGS-----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 99 ~~~~~~--~~~----~~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
...... ... ....... ..+.|.+.....+|.|.|+|.|.|..+.......+.+.|
T Consensus 159 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 159 QKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 421100 000 0111111 124678888888999999999999887644444555555
No 196
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.71 E-value=5.9e-16 Score=111.43 Aligned_cols=122 Identities=17% Similarity=0.201 Sum_probs=82.4
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcce----eeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEe-eCCCCceeE
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEAT----SNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVE-ADPPARSFK 93 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~----s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-~~~~~~~~~ 93 (261)
+.+|.|.+++.+|+|.|+|.+.|..|... ...+.|.|..++. .+.........|+.+.|.|.+. +.|.| .+.
T Consensus 64 ~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~--~p~~~~~~~~~g~~~~l~C~~~~g~P~p-~i~ 140 (201)
T 1dr9_A 64 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFP--TPSISDFEIPTSNIRRIICSTSGGFPEP-HLS 140 (201)
T ss_dssp TTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCC--CCEEEEEECSSTTEEEEEEEEEEESSCE-EEE
T ss_pred CcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCC--CCceEeccCCCCCeEEEEEecCCccCCC-EEE
Confidence 46999999999999999999999876542 3456666665421 1222222335688999999995 77777 899
Q ss_pred EEEcCCccccccCCceEEeCC--ce-eEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 94 WKFNNSGETLDVGSERFSSGS--RG-SMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 94 W~~~~~~~~~~~~~~~~~~~~--~~-~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
|++++. .+......+.... .. ....+..+..+|.|.|+|.|.|..+....
T Consensus 141 W~k~g~--~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~ 193 (201)
T 1dr9_A 141 WLENGE--ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQ 193 (201)
T ss_dssp EEESSC--EECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEE
T ss_pred EEECCE--ECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeee
Confidence 999864 3332223333322 21 11123445568999999999999887666
No 197
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.71 E-value=6.6e-16 Score=111.22 Aligned_cols=170 Identities=12% Similarity=-0.015 Sum_probs=100.7
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc---eEEe
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG---TQVT 145 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~---~~~~ 145 (261)
..+.+|++++|.|.+.. +.+ .+.|++++....................|.|.++..+|+|.|+|.+.+... ....
T Consensus 17 ~~v~~G~~v~L~C~~~~-~~~-~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~ 94 (201)
T 1nkr_A 17 PLVKSEETVILQCWSDV-MFE-HFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAP 94 (201)
T ss_dssp SEEETTCCEEEEEEESS-CCS-EEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCC
T ss_pred CccCCCCcEEEEEeccC-CCC-EEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCC
Confidence 34679999999999874 444 899999875321100001111122345799999999999999999986421 1111
Q ss_pred eEEEEEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE--EEecC--CCCcEEEcCC
Q psy11549 146 PCLYQVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV--NLTNL--DTPAFTLEDL 218 (261)
Q Consensus 146 ~~~~~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~i~~~ 218 (261)
+..+.+.+...+.+|... ......|+.++|.|.+ . +.+..|. |+++........ ..... ....|.|.++
T Consensus 95 s~~~~l~V~~~~~~p~i~~~p~~~v~~G~~v~L~C~~--~-~~~~~~~-w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v 170 (201)
T 1nkr_A 95 SDPLDIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSS--R-SSYDMYH-LSREGEAHERRLPAGPKVNGTFQADFPLGPA 170 (201)
T ss_dssp CCCEEEEEECSSCCCEEEEESCSEECTTCEEEEEEEE--S-SCCSEEE-EEETTCSSCEEEECEEEETTEEEEEEEEEEC
T ss_pred CCCEEEEeeccCCCCceecCCCCccCCCCeEEEEEeC--C-CCCceEE-EEECCcccCcccccccccCCceEEEEEeCCc
Confidence 223334443333223211 0123569999999997 2 2344554 445543332111 11111 1467899996
Q ss_pred CCCCccEEEEEEEEEcCC---CcCCceeeeeee
Q psy11549 219 GLDGTVLMRVVISGVNAK---GRSLPVIWDDFS 248 (261)
Q Consensus 219 ~l~~~~~Y~~~~~a~N~~---G~~~~s~~~~~~ 248 (261)
+ |+|.| +|.|.|.. .++.+|.++++.
T Consensus 171 ~--d~G~Y--~C~a~~~~~~~~~s~~S~~~~l~ 199 (201)
T 1nkr_A 171 T--HGGTY--RCFGSFHDSPYEWSKSSDPLLVS 199 (201)
T ss_dssp C--SCEEE--EEEEEETTEEEEECCCCCCEEEE
T ss_pred C--CCeeE--EEEEEcCCCCCcCCCCCCCEEEE
Confidence 6 99999 88888653 567777777664
No 198
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.71 E-value=4.3e-16 Score=116.47 Aligned_cols=120 Identities=15% Similarity=0.247 Sum_probs=86.3
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc----ceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCC----ce
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE----ATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPA----RS 91 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~----~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~----~~ 91 (261)
.+|.|.+++.+|+|.|+|.+.|..|. .....+.|.|..+|.+...+.. +.+..|++++|.|.+.+.+++ ..
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~~~ 157 (256)
T 1nqb_A 79 AYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLS-LPVSLGDQASISCRSSQSIVHSNGNTY 157 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSE-EEECTTCCEEEEEEESSCCBCTTSCBC
T ss_pred EEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcE-EEEecCCcEEEEeEecCcccccccceE
Confidence 38999999999999999999988652 1233467888766655443333 668899999999999988765 47
Q ss_pred eEEEEc--CCccccc---------cCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 92 FKWKFN--NSGETLD---------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 92 ~~W~~~--~~~~~~~---------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+.|++. +...... ....++. .......|.|.++..+|+|.|+|.+.+..
T Consensus 158 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 219 (256)
T 1nqb_A 158 LEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHV 219 (256)
T ss_dssp EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 999993 3221100 0012232 23345579999999999999999999854
No 199
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.71 E-value=2.6e-16 Score=117.66 Aligned_cols=119 Identities=17% Similarity=0.230 Sum_probs=83.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC---cceeeeEEEEEEe----------------eceeecCceeEEEeeCCCcEEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG---EATSNQLKLRVKY----------------APICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~---~~~s~~~~l~V~~----------------~p~~~~~~~~~~~~~~g~~~~l~C 81 (261)
+|.|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+...+.. ..+.+|++++|.|
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~v~~G~~v~L~C 160 (256)
T 3umt_A 82 YLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSS-LSASLGERVSITC 160 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSE-EEECTTCCEEEEE
T ss_pred EEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCe-EEEECCCCEEEEE
Confidence 499999999999999999988721 1123456788874 3333333333 6788999999999
Q ss_pred EEeeCCCCceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 82 AVEADPPARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 82 ~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
.+.+.+.+ .+.|++...+.... ....++. .......|.|.++..+|+|.|+|.+.+...
T Consensus 161 ~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 232 (256)
T 3umt_A 161 RASQDIGS-NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSP 232 (256)
T ss_dssp EESSCCTT-CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSS
T ss_pred EEecCCCc-EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCC
Confidence 99998877 89999853221111 0012222 233455799999999999999999998543
No 200
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.71 E-value=2.3e-16 Score=110.45 Aligned_cols=144 Identities=11% Similarity=0.138 Sum_probs=96.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.+++..+.|++++.. +... ...+.+.++..+|+|.|+|.+.+..... .
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~--~~~~---------~~~~~~~~~~~~d~G~Y~C~~~~~~~s~--~-- 78 (170)
T 3ry4_A 14 INVLQEDSVTLTCQGARSPESDSIQWFHNGNL--IPTH---------TQPSYRFKANNNDSGEYTCQTGQTSLSD--P-- 78 (170)
T ss_dssp SEEETTCEEEEEEESCCCSSSSCEEEEETTEE--CTTC---------CSSEEEEECCGGGCEEEEEEETTSBCCC--C--
T ss_pred eEEECCCcEEEEEEecCCCCcceEEEEECCeE--cccC---------ccceEEEecccccCeEEEEEEeCCCceE--e--
Confidence 34679999999999999875448999997742 2111 2246778999999999999999754332 2
Q ss_pred EEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 149 YQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 149 ~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
+.+.+..+|. .+....+ ..|+.+.|.|.+ ..+.|..-..|+++.... . .......|.|.+++.+|.|.|
T Consensus 79 ~~l~v~~~~~~~~~~~~~~--~~g~~~~l~C~~--~~~~p~~~~~W~~~g~~~----~-~~~~~~~L~i~~v~~~d~G~Y 149 (170)
T 3ry4_A 79 VHLTVLFEWLVLQTPHLEF--QEGETIMLRCHS--WKDKPLVKVTFFQNGKSQ----K-FSHLDPTFSIPQANHSHSGDY 149 (170)
T ss_dssp EEEEEECCSEEEECSCSEE--CTTCCEEEEEEE--GGGCCEEEEEEEETTEEE----E-EESSCCEEEESSCCGGGCEEE
T ss_pred EEEEEECCceEecCCCcee--ecCCeEEEEEEC--CCCCCCceEEEEECCeEc----c-ccCCCCeEEEEeccccCCEEE
Confidence 3333333331 1122233 459999999997 455564434444432221 1 123457899999999999999
Q ss_pred EEEEEEEcCCCc
Q psy11549 227 RVVISGVNAKGR 238 (261)
Q Consensus 227 ~~~~~a~N~~G~ 238 (261)
+|.|.|..|.
T Consensus 150 --~C~a~n~~g~ 159 (170)
T 3ry4_A 150 --HCTGNIGYTL 159 (170)
T ss_dssp --EEEEEETTEE
T ss_pred --EEEEEeCcCc
Confidence 9999999984
No 201
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.71 E-value=3.3e-17 Score=119.09 Aligned_cols=125 Identities=17% Similarity=0.183 Sum_probs=85.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC--cceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-Ccee
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG--EATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSF 92 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~--~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~ 92 (261)
.+|.|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...... ..+..|+.++|.|.+.+.++ +..+
T Consensus 70 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v 148 (213)
T 3mj8_L 70 ATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPS-SEELKTNQATLVCMINGFYPADVAV 148 (213)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEE
T ss_pred EEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCC-cccccCCcEEEEEEeeceeCCCeEE
Confidence 4799999999999999999999987 233556788887 45554432211 22337999999999998644 3489
Q ss_pred EEEEcCCccccccCC-ceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 93 KWKFNNSGETLDVGS-ERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 93 ~W~~~~~~~~~~~~~-~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.|++++......... ......+ ..+.|.|..+..+|.|.|+|.|.|..+....
T Consensus 149 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 205 (213)
T 3mj8_L 149 TWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEK 205 (213)
T ss_dssp EEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEE
T ss_pred EEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEe
Confidence 999987422110000 0001111 1235889999999999999999998765544
No 202
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.71 E-value=1.4e-17 Score=120.29 Aligned_cols=136 Identities=13% Similarity=0.188 Sum_probs=85.5
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe-----------------------
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY----------------------- 57 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~----------------------- 57 (261)
||||.+|... ...+++|.|.+++.+|+|.|+|.+.+.. +..+.|.|..
T Consensus 35 ~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~----s~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (204)
T 1sy6_A 35 FKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNK----SKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKK 105 (204)
T ss_dssp EETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSC----CCCEEEEEEC-----------------------
T ss_pred EECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCC----CeeEEEEEEEecccccccccccccccccccccc
Confidence 4788887422 1135689999999999999999975432 2334555540
Q ss_pred --------eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecC-CCCc
Q psy11549 58 --------APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPV-TELD 128 (261)
Q Consensus 58 --------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d 128 (261)
++.+...+. ....+|++++|.|. +.|.| .+.|++++...........+... ...|.|.++ ..+|
T Consensus 106 ~~~~~~~~~~~~~~~p~--~v~~~G~~v~L~C~--g~p~p-~i~W~k~~~~l~~~~~~~~~~~~--~~~L~I~~v~~~~D 178 (204)
T 1sy6_A 106 DGSDGNEEMGGITQTPY--KVSISGTTVILTCP--QYPGS-EILWQHNDKNIGGDEDDKNIGSD--EDHLSLKEFSELEQ 178 (204)
T ss_dssp -------------CCCC--EEEEETTEEEEECS--CCCSS-CEEEEETTEEESCCTTCTTEEEE--TTEEEETTCCHHHH
T ss_pred ccccccccccceecCCc--eeeecCCcEEEEcC--CCCCC-ceEEEECCEECCCccCCceEecC--CCEEEEeeCCcccc
Confidence 111111111 12238999999999 66767 79999987432111111222212 347999999 9999
Q ss_pred CeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 129 YGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 129 ~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
+|.|+|.|.|..|.. .+..+.+.+
T Consensus 179 ~G~Y~C~A~N~~g~~-~s~~l~l~~ 202 (204)
T 1sy6_A 179 SGYYVCYPRGSKPED-ANFYLYLRA 202 (204)
T ss_dssp CEEEEEEETTSCGGG-SSCEEEEEE
T ss_pred CEEEEEEeccCCCCc-eeEEEEEEE
Confidence 999999999998853 222444443
No 203
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.70 E-value=9.6e-18 Score=135.85 Aligned_cols=206 Identities=15% Similarity=0.112 Sum_probs=107.4
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe-----------------ecee-ecCceeEEEeeCCCcEEEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY-----------------APIC-KSDRIVIVGASRSESVDIHCA 82 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~-----------------~p~~-~~~~~~~~~~~~g~~~~l~C~ 82 (261)
.|.|.+++.+| |.|+|.|.|..+.. .....|.+.. +|.+ ..++.....+..|+.+.|.|.
T Consensus 195 ~L~i~~~~~~d-G~Y~C~a~n~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~ 272 (457)
T 1hzh_H 195 VVTVPSSSLGT-QTYICNVNHKPSNT-KVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCV 272 (457)
T ss_dssp EEEECSGGGGT-SCCEEEEEEGGGTE-EEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEE
T ss_pred EEEecccccCC-ceEEEEEEeCCCCc-ceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEE
Confidence 79999999999 99999999976654 2233333221 2322 111111011457999999999
Q ss_pred EeeCCCC---ceeEEEEcCCccccccCCc--eEEeCCceeEEEEe---cCCCCc---CeEEEEEEEcCCceEEeeEEEEE
Q psy11549 83 VEADPPA---RSFKWKFNNSGETLDVGSE--RFSSGSRGSMLRYT---PVTELD---YGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 83 ~~~~~~~---~~~~W~~~~~~~~~~~~~~--~~~~~~~~~~l~i~---~~~~~d---~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
+.+.+++ ..+.|++++.. +..... ....... .+.+. .+...| .|.|+|.|.|..+.......+.+
T Consensus 273 ~~g~~p~p~~~~i~W~k~~~~--~~~~~~~~~~~~~~g--~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~ 348 (457)
T 1hzh_H 273 VVDVSHEDPEVKFNWYVDGVE--VHNAKTKPREEQYNS--TYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK 348 (457)
T ss_dssp EECCCTTCCCCEEEEEETTEE--ECCCEEEEEEECTTS--CEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECC
T ss_pred EEcccCCCCceEEEEEeCCcc--ccccccccceecCCC--cEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEc
Confidence 9987653 38999998742 111111 1111111 22222 234555 99999999986544322222222
Q ss_pred --EeCCCCC----CCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE--EEecCCCCcE------EEc
Q psy11549 152 --VLAGKPQ----PPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV--NLTNLDTPAF------TLE 216 (261)
Q Consensus 152 --~~~~~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~~------~i~ 216 (261)
.+..+|. ++.... ..+..+.|.|.+ .+..|.. .+.|+++........ .........+ .|.
T Consensus 349 ~~~~~~~P~v~~~~~~~~~---~~~~~~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~ 423 (457)
T 1hzh_H 349 AKGQPREPQVYTLPPSRDE---LTKNQVSLTCLV--KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVD 423 (457)
T ss_dssp CCCCCBCCEEEEECCCGGG---GGSSEEEEEEEE--EEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEE
T ss_pred ccCCCCCCeEEEECCCccc---cCCCcEEEEEEE--EeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEC
Confidence 1122221 111111 124459999997 4434432 334444432221111 1111222222 333
Q ss_pred CCCCCCccEEEEEEEEEcCCCcC
Q psy11549 217 DLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 217 ~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
....+++|.| +|.|.|.....
T Consensus 424 ~~~~~~~g~Y--tC~a~n~~l~~ 444 (457)
T 1hzh_H 424 KSRWQQGNVF--SCSVMHEALHN 444 (457)
T ss_dssp HHHHHTTCCE--EEEEECTTSGG
T ss_pred hHHccCCCeE--EEEEEECCCCC
Confidence 3222468999 99999987543
No 204
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.70 E-value=1.2e-16 Score=113.45 Aligned_cols=159 Identities=13% Similarity=0.120 Sum_probs=106.0
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-----------CCceEEe-----CCceeEEEEecCCCCcCeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-----------GSERFSS-----GSRGSMLRYTPVTELDYGTL 132 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-----------~~~~~~~-----~~~~~~l~i~~~~~~d~g~y 132 (261)
+.+..|+++.|.|.+.+.+.+ .+.|++++....... ...++.. ......|.|.++..+|+|.|
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSI-QFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCC-CEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred EEEeCCCCEEEEEEEcCCCce-EEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 667899999999999877776 899999874212110 0112222 22245699999999999999
Q ss_pred EEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCc
Q psy11549 133 SCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPA 212 (261)
Q Consensus 133 ~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (261)
+|.+.+..+.. .+.|. ..+. +....+ ..|+.++|.|.+ .++.++.+.| ++..... ......
T Consensus 84 ~C~~~~~~~~~----~l~V~--~~~~-~~~~~v--~~g~~~~l~C~~--~~~p~~~v~W-~~~~~~~-------~~~~~~ 144 (184)
T 2ny1_B 84 ICEVEDQKEEV----QLLVF--GLTA-NSDTHL--LQGQSLTLTLES--PPGSSPSVQC-RSPRGKN-------IQGGKT 144 (184)
T ss_dssp EEEETTEEEEE----EEEEE--EEEE-SSCSEE--ETTCCEEEEEEC--CTTCCCEEEE-ECTTSCE-------EEESSE
T ss_pred EEEEEcCCCcE----EEEEE--EecC-CCCcee--ecCCCEEEEEEc--CCCCCCEEEE-EeCCCcc-------ccCceE
Confidence 99999865422 23332 2222 222334 459999999997 3433344444 4332221 113478
Q ss_pred EEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 213 FTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 213 ~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
|.|.+++.+|.|.| +|.|.|..|....+..+.+..
T Consensus 145 L~i~~v~~~d~G~Y--~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 145 LSVSQLELQDSGTW--TCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp EEESSCCGGGCEEE--EEEEEETTEEEEEEEEEEEEC
T ss_pred EEEecCCcCCCeEE--EEEEEECCceEEEEEEEEEEe
Confidence 99999999999999 999999998777777666653
No 205
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.70 E-value=5.2e-16 Score=113.33 Aligned_cols=175 Identities=13% Similarity=0.139 Sum_probs=104.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCc--eeEEEEcCCcccccc-------------CCceE---------EeCCceeEEEEecC
Q psy11549 69 VGASRSESVDIHCAVEADPPAR--SFKWKFNNSGETLDV-------------GSERF---------SSGSRGSMLRYTPV 124 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~--~~~W~~~~~~~~~~~-------------~~~~~---------~~~~~~~~l~i~~~ 124 (261)
+.+..|++++|.|.+.+.+.+. .+.|++++....... ...+. ........|.|.++
T Consensus 11 V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 90 (225)
T 4fmk_A 11 VRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGL 90 (225)
T ss_dssp EEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSC
T ss_pred EEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccC
Confidence 5677999999999998877652 489998764221100 00001 01123457999999
Q ss_pred CCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCC-cceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE
Q psy11549 125 TELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQ-NCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV 203 (261)
Q Consensus 125 ~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~-~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~ 203 (261)
..+|+|.|+|.+.+..+..... ...+.+..+|..+. ........+..+.+.|.. .++.|....+|++.........
T Consensus 91 ~~~D~G~Y~C~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~--~~~~P~~~~~w~~~~~~~~~~~ 167 (225)
T 4fmk_A 91 RVEDEGNYTCEFATFPNGTRRG-VTWLRVIAQPENHAEAQEVTIGPQSVAVARCVS--TGGRPPARITWISSLGGEAKDT 167 (225)
T ss_dssp CGGGCEEEEEEEEEETTEEEEE-EEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEE--EEEBSCCEEEEECSSCCEEEEE
T ss_pred CHHHCcceEEEEEeCCCcceee-eeeeeeecCCceeecccceeecceeeeeeeeee--cCCCCCCEEEEEECCccccCCc
Confidence 9999999999999876655443 22233323332111 001112346667777765 3455555455554433322111
Q ss_pred -EEecCCC-----CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 204 -NLTNLDT-----PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 204 -~~~~~~~-----~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
....... +.|.|..++..++|.| +|.|.|++|..+.+..+.+.
T Consensus 168 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y--tC~a~N~~~~~~~~~~v~l~ 216 (225)
T 4fmk_A 168 QEPGIQAGTVTIISRYSLVPVGRADGVKV--TCRVEHESFEEPILLPVTLS 216 (225)
T ss_dssp EEECSSTTCEEEEEEEEECCCGGGTTCEE--EEEEECTTCSSCEEEEEECC
T ss_pred ceEEecCCCEEEEEEEEEeeCCHHHCCEE--EEEEEcCCCCeEEEEEEEEE
Confidence 1111111 2588988888999999 99999999988766655544
No 206
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.70 E-value=5.4e-16 Score=115.30 Aligned_cols=118 Identities=12% Similarity=0.171 Sum_probs=82.7
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEEEEEeec---------------eeecCceeEEEeeCCCcEEEEEEEe
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKLRVKYAP---------------ICKSDRIVIVGASRSESVDIHCAVE 84 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l~V~~~p---------------~~~~~~~~~~~~~~g~~~~l~C~~~ 84 (261)
+|.|.+++.+|+|.|+|.+.|..+.. ....+.|.|...| .+...+.. +.+.+|++++|.|.+.
T Consensus 82 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C~~~ 160 (247)
T 2ghw_B 82 YLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPAT-LSLSPGERATLSCRAS 160 (247)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSE-EEECTTSCEEEEEEES
T ss_pred EEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCE-EEecCCCcEEEEEEeC
Confidence 79999999999999999999873221 1334577877542 12222222 5688999999999999
Q ss_pred eCCCCceeEEEE--cCCccccc---------cCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 85 ADPPARSFKWKF--NNSGETLD---------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 85 ~~~~~~~~~W~~--~~~~~~~~---------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+.+++ .+.|++ ++...... ....++. .......|.|.++..+|+|.|+|.|.+..
T Consensus 161 ~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 161 QSVRS-NLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp SCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred CCccc-eEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 98887 899998 33221100 0112232 23345579999999999999999999854
No 207
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.70 E-value=8.1e-16 Score=111.79 Aligned_cols=171 Identities=15% Similarity=0.139 Sum_probs=102.8
Q ss_pred EEEeeCC--CcEEEEEEEeeCCCCceeEEEEc-CCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 68 IVGASRS--ESVDIHCAVEADPPARSFKWKFN-NSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 68 ~~~~~~g--~~~~l~C~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
.+.+.+| +.+.|.|.+.+ |.+ .+.|++. .++..+.. ...+.... ...|.|.++..+|+|.|+|.|.+..+...
T Consensus 16 ~v~v~eG~~~~v~L~C~~~~-p~~-~v~w~~~~~~g~~~~~-~~~~~~~~-~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 16 VVYITENKNKTVVIPCLGSI-SNL-NVSLCARYPEKRFVPD-GNRISWDS-KKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp EEEECCSTTCEEEECCCBSS-TTC-CEEEEEETTTEEECCC-SSSCEEET-TTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred EEEEecCCCccEEEeeccCC-CCc-EEEEEhhcCCCccccC-CCcccccC-CccEEEccCChhcCceEEEEEEECCeeEE
Confidence 3778899 99999999976 555 7999875 11222221 22222222 22599999999999999999998544332
Q ss_pred eeEEEEEEeCC--CCC----CCCcceEEeecCCeEEEEeecCCCCCC--CeEEEEEEEeCCccce--e-E-EEe------
Q psy11549 145 TPCLYQVVLAG--KPQ----PPQNCSVRNETTSSVHISCTPGYDGGL--PQTFTLELYSASDLNL--L-V-NLT------ 206 (261)
Q Consensus 145 ~~~~~~v~~~~--~p~----~p~~~~v~~~~~~~~~l~c~~~~~~~~--p~~~~~~~~~~~~~~~--~-~-~~~------ 206 (261)
. ..+.+.+.. +|. ++.. +....|+.++|.|.+ .+.. +..+.| ++....... . . ...
T Consensus 92 s-~~~~l~v~~~~~p~~~~~~~~~--~~v~~G~~v~L~C~~--~g~p~~~~~i~W-~~~g~~~~~~~~~~~~~~~~~~~~ 165 (213)
T 2x1w_L 92 S-IMYIVVVVGYRIYDVVLSPSHG--IELSVGEKLVLNCTA--RTELNVGIDFNW-EYPSSKHQHKKLVNRDLKTQSGSE 165 (213)
T ss_dssp C-CCEEEEECBCCEEEEEEESCSC--EEEETTCCEEEEEEE--EECTTBCCEEEE-ECSCSSCCSEEEEEEEECCCSSCS
T ss_pred E-EEEEEEEeCCcccceEEcCCCC--eEEcCCCCEEEEEEE--ECCCCCceEEEE-EecCCccceEEEeccccccccCcc
Confidence 2 224444432 111 2222 233569999999997 3222 223444 333322111 1 0 000
Q ss_pred -cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 207 -NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 207 -~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
......|.|.+++.+|+|.| +|.|.|..|....+..+.+..+
T Consensus 166 ~~~~~~~L~I~~v~~~D~G~Y--~C~a~N~~g~~~~~~~l~V~~~ 208 (213)
T 2x1w_L 166 MKKFLSTLTIDGVTRSDQGLY--TCAASSGLMTKKNSTFVRVHED 208 (213)
T ss_dssp CEEEEEEEEESSCCGGGCEEE--EEEEECSSCEEEEEEEEEEEC-
T ss_pred ceeeeEEEEECCCCcccCEEE--EEEEecCCCcEEEEEEEEEecc
Confidence 01123599999999999999 9999999998877777777543
No 208
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.70 E-value=6.9e-17 Score=118.10 Aligned_cols=135 Identities=19% Similarity=0.272 Sum_probs=91.9
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCC-CcceeeeEEEEEEeeceeecCceeEEEeeCCCcE-EEEEEEe-eCCCCceeEEE
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTK-GEATSNQLKLRVKYAPICKSDRIVIVGASRSESV-DIHCAVE-ADPPARSFKWK 95 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~-~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~-~~~~~~~~~W~ 95 (261)
+.+|.|.+++.+|+|.|+|.+.+.. +.. +..+.|.|..+|.+...... . ...|+.+ .|.|.+. +.|.| .+.|+
T Consensus 77 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~-~~~~~L~V~~~P~~~~~~~~-~-~~~g~~~~~l~C~~~~g~P~p-~v~W~ 152 (221)
T 3eow_R 77 DASLRMFGLRVEDEGSYTCLFVTFPQGSR-SVDIWLRVLAKPQNTAEVQK-V-QLTGEPVPMARCVSTGGRPPA-QITWH 152 (221)
T ss_dssp CCEEECCCSSCCCCSCBEEEEEESSSCSC-EEECCCCCCCCCEEEEEEEC-C-CCCSSSCCEEEEEEESCSSCC-CEEEE
T ss_pred CceEEEccCChHHCeEEEEEEEeCCCCce-EEEEEEEEEECCCceeecCC-c-ccCCceEEEEEEECCCccCCC-eeEEE
Confidence 5699999999999999999999876 544 66788888888776532222 1 1578888 5999988 66667 89999
Q ss_pred EcCCccccccCCc--eEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 96 FNNSGETLDVGSE--RFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 96 ~~~~~~~~~~~~~--~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
+++.+........ ........+.|.|.++..+|.|.|+|.|.|..+.... .+.+...|..|.
T Consensus 153 k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~----~~~v~~~~~~~~ 216 (221)
T 3eow_R 153 SDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQ----LLTVSLTVYYPH 216 (221)
T ss_dssp CSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCE----EEEECCCCCC--
T ss_pred eCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCe----EEEEEEEEEccc
Confidence 8754432211000 0000112457999999999999999999998765433 344445555443
No 209
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.69 E-value=9.2e-16 Score=115.39 Aligned_cols=125 Identities=18% Similarity=0.331 Sum_probs=86.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEE---eeCCCCceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAV---EADPPARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~---~~~~~~~~~~W~ 95 (261)
.+|.|.+++.+|+|.|+|.+.+..+.. .+..+.|.|. |. .+. ...+..|+.+.|.|.+ .+.|.+ .+.|+
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~---~p~-~~~v~~G~~v~L~C~~~~~~~~p~~-~v~W~ 156 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--PE---EPR-DLRVRVGDTTQMRCSIQSTEEKRVT-KVNWM 156 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--CC---CCS-EEEEETTCCEEECCBCEESSSSCCC-EEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--cc---CCC-ccccccCCcEEEEEEecCCCCCCcc-ceEEE
Confidence 689999999999999999999876544 3444555553 21 112 3678899999999999 444666 89999
Q ss_pred EcCCccccc---------------cCCc----eEEe----CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 96 FNNSGETLD---------------VGSE----RFSS----GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 96 ~~~~~~~~~---------------~~~~----~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
+++...... .... ++.. ......|.|.++..+|+|.|+|.|.|..+.......+.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V 235 (268)
T 3mj6_A 157 FSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHV 235 (268)
T ss_dssp EECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEE
Confidence 853211000 0000 1111 123457999999999999999999998887666544444
No 210
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.69 E-value=2.1e-16 Score=115.44 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=91.5
Q ss_pred ECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEc
Q psy11549 18 SNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFN 97 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~ 97 (261)
.+.+|.|.+++.+|+|.|+|.+.+..+........+.+..+|........ .....++.+.+.|.+.+.+++..+.|+++
T Consensus 81 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~c~~~~~~P~~~~~w~~~ 159 (225)
T 4fmk_A 81 RDATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQE-VTIGPQSVAVARCVSTGGRPPARITWISS 159 (225)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECC-BCCSSSCEEEEEEEEEEEBSCCEEEEECS
T ss_pred CcEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccc-eeecceeeeeeeeeecCCCCCCEEEEEEC
Confidence 34689999999999999999999988776555566666655554433222 33456777777777665544448999887
Q ss_pred CCccccccCCceEEeCCc----eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCC
Q psy11549 98 NSGETLDVGSERFSSGSR----GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAG 155 (261)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~ 155 (261)
+..... . ......... .+.|.|.++..+|+|.|+|.|.|..+.......++|.|.+
T Consensus 160 ~~~~~~-~-~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 160 LGGEAK-D-TQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp SCCEEE-E-EEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred CccccC-C-cceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 642211 1 111111111 3469999999999999999999988776655566666654
No 211
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.69 E-value=6.5e-17 Score=117.52 Aligned_cols=119 Identities=21% Similarity=0.252 Sum_probs=82.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEee-CCCCceeEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEA-DPPARSFKWKF 96 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~W~~ 96 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|.. +|.+...... .....|+.+.|.|.+.+ .|++..+.|++
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k 150 (213)
T 3d9a_L 72 TLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKI 150 (213)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCC-hhhcCCCcEEEEEEEeeecCCceEEEEEc
Confidence 8999999999999999999988776444456777764 4544322111 11236889999999987 44444899999
Q ss_pred cCCccccccC-Cc--eEEeCC-----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 97 NNSGETLDVG-SE--RFSSGS-----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 97 ~~~~~~~~~~-~~--~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
++.. +... .. ...... ..+.|.|.++..+|.|.|+|.|.|....
T Consensus 151 ~g~~--~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 151 DGSE--RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 202 (213)
T ss_dssp TTEE--ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCCc--CcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCC
Confidence 8742 2111 00 011111 1347999999999999999999997654
No 212
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.69 E-value=1.2e-16 Score=115.91 Aligned_cols=119 Identities=16% Similarity=0.178 Sum_probs=81.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeCC-CCceeEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEADP-PARSFKWKF 96 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~~W~~ 96 (261)
+|.|.+++.+|+|.|+|.+.|..+........|.|.. +|.+...... .....|+.++|.|.+.+.+ ++..+.|++
T Consensus 71 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k 149 (210)
T 1lk3_L 71 TLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPS-TEQLATGGASVVCLMNNFYPRDISVKWKI 149 (210)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCc-hhhccCCcEEEEEEEEeEeCCceEEEEEe
Confidence 8999999999999999999988765434445777764 3444321111 1133799999999999754 444899999
Q ss_pred cCCccccccC-Cc--eEEe-CCc----eeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 97 NNSGETLDVG-SE--RFSS-GSR----GSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 97 ~~~~~~~~~~-~~--~~~~-~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
++.. +... .. .... .+. .+.|.|.++..+|+|.|+|.|.|....
T Consensus 150 ~g~~--~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 150 DGTE--RRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp TTEE--CCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCcc--CCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 8742 2111 00 0111 111 236899999999999999999997553
No 213
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.69 E-value=5.8e-16 Score=117.77 Aligned_cols=123 Identities=13% Similarity=0.174 Sum_probs=88.4
Q ss_pred CCCCEeEEEEEEeCCCcceeeeEEEEEEe--eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccC
Q psy11549 29 RQSAGTYKCSAINTKGEATSNQLKLRVKY--APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVG 106 (261)
Q Consensus 29 ~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~--~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~ 106 (261)
..|+|.|+|.|.|..+...+..+.|.|.. +|.+...... ..+..|+.+.|.|.+.+.|.+ .+.|++++........
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p-~v~W~~~~~~~~~~~~ 227 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQ-TVVRQGENITLMCIVIGNEVV-NFEWTYPRKESGRLVE 227 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESC-SEEETTSCEEEEEEEESCSSB-EEEEECTTSSSSCCCC
T ss_pred eccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCc-ceeEcCCCEEEEEEECCCCCc-ceEEEcCCccCCCccc
Confidence 57999999999988776656667777765 4444333222 457899999999999998877 8999986642111111
Q ss_pred CceEEe----CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 107 SERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 107 ~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
...... ......|.|.++..+|+|.|+|.|.|..|....+..+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~ 278 (289)
T 3mjg_X 228 PVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITV 278 (289)
T ss_dssp CEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred ccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEE
Confidence 111111 22346899999999999999999999999988866666654
No 214
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.68 E-value=1.1e-15 Score=114.29 Aligned_cols=118 Identities=18% Similarity=0.201 Sum_probs=83.1
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC-------cc-eeeeEEEEEEeec---------------eeecCceeEEEeeCCCcE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG-------EA-TSNQLKLRVKYAP---------------ICKSDRIVIVGASRSESV 77 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~-------~~-~s~~~~l~V~~~p---------------~~~~~~~~~~~~~~g~~~ 77 (261)
+|.|.+++.+|+|.|+|.+.|..| .. ....+.|.|...| .+...+. .+.+.+|+++
T Consensus 79 ~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~v~~G~~v 157 (257)
T 1f3r_B 79 FLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPS-LLSASVGDRV 157 (257)
T ss_dssp EEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETS-EECCCTTCCE
T ss_pred EEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCC-EEEEcCCCCE
Confidence 899999999999999999998854 11 1234578887543 1111122 2568899999
Q ss_pred EEEEEEeeCCCCceeEEEE--cCCcccccc---------CCceEEe--CCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 78 DIHCAVEADPPARSFKWKF--NNSGETLDV---------GSERFSS--GSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 78 ~l~C~~~~~~~~~~~~W~~--~~~~~~~~~---------~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+|.|.+.+.+++ .+.|++ ++....... ...++.. ......|.|.++..+|+|.|+|.|.|..
T Consensus 158 ~L~C~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 158 TLSCKGSQNINN-YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp EEEEECSSCCBT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred EEEEEECCcCCC-cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 999999988877 899999 333211100 0123322 2345579999999999999999999965
No 215
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.68 E-value=5.2e-15 Score=108.06 Aligned_cols=172 Identities=12% Similarity=0.115 Sum_probs=104.5
Q ss_pred EEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCcccc------------ccCCceEEe-----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP----ARSFKWKFNNSGETL------------DVGSERFSS-----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~------------~~~~~~~~~-----~~~~~~l~i~~~~~~ 127 (261)
+.+..|+.+.|.|.+.+.|. ...+.|++++..... .....+... ......|.|.++..+
T Consensus 11 v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 90 (222)
T 3sbw_C 11 YVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ 90 (222)
T ss_dssp EEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc
Confidence 66889999999999876553 237999986411000 000112221 223458999999999
Q ss_pred cCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcce-EEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc-ceeE--
Q psy11549 128 DYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCS-VRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL-NLLV-- 203 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~-v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~-~~~~-- 203 (261)
|+|.|+|.+.+ .+.... .+.+.|..+|..|.... .....|+.+.|.|.+ .+ .|...+.|++..+.. ....
T Consensus 91 D~G~Y~C~~~~-~~~~~~--~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~--~g-~P~p~i~W~~~~g~~~~~~~~~ 164 (222)
T 3sbw_C 91 DAGVYRCMISY-GGADYK--RITVKVNAPYNKINQRILVVDPVTSEHELTCQA--EG-YPKAEVIWTSSDHQVLSGKTTT 164 (222)
T ss_dssp GCEEEEEEEES-SSEEEE--EEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEE--EE-BSCCEEEEEETTCCEECCEEEE
T ss_pred cCeEEEEEEEe-CCCcee--EEEEEEECCCCCCCceeeeeecCCCcEEEEEEe--cC-CCCCeEEEEECCCceecCccce
Confidence 99999999998 454444 44555555665543222 134578999999997 33 554444555542221 1111
Q ss_pred EEecCCCCcEEEc---CCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 204 NLTNLDTPAFTLE---DLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 204 ~~~~~~~~~~~i~---~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.........+.+. .++..+.|.| +|.|.|.+|....+..+.+.
T Consensus 165 ~~~~~~~~~~~~~~~l~v~~~d~g~Y--~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 165 TNSKREEKLFNVTSTLRINTTTNEIF--YCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EECC----CEEEEEEEEEECCTTCEE--EEEEEETTTTEEEEEEEECC
T ss_pred EEEcCCCCCEEEEEEEEEeccCCcEE--EEEEEeCccceeeEEEEEec
Confidence 1122222223222 2335788999 99999999988777777665
No 216
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.68 E-value=3.5e-16 Score=113.69 Aligned_cols=122 Identities=21% Similarity=0.281 Sum_probs=83.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcce---eeeEEEEEEee---ceeecCceeEEEeeCCCcEEEEEEEeeC----CCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEAT---SNQLKLRVKYA---PICKSDRIVIVGASRSESVDIHCAVEAD----PPA 89 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~---s~~~~l~V~~~---p~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~ 89 (261)
.+|.|.+++.+|+|.|+|.+.+..+... +..+.|.|..+ |.+..+ ..+.+|+.++|.|.+.+. |.|
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~----~~~~~G~~v~L~C~~~~~~~~~p~p 157 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFL----EPLESGRPTRLSCSLPGSCEAGPPL 157 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC------CCCCTTCCEEEEEECTTCCSCSSCC
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecC----ccccCCCeEEEEEEeccCCCCCCCc
Confidence 4899999999999999999998764321 24678888763 333322 125689999999999774 555
Q ss_pred ceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 90 RSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
.+.|++++... . ... ....+.|.|..+..+|.|.|+|.|.|..+.......+.+.|
T Consensus 158 -~v~W~~~~~~~-~---~~~---~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 158 -TFSWTGNALSP-L---DPE---TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp -EEEEESSTTSS-S---CSS---CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred -eEEEeCCCCcc-C---CCC---ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 89999887421 1 111 12344799999999999999999999765544444554443
No 217
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.68 E-value=2.6e-16 Score=113.31 Aligned_cols=167 Identities=13% Similarity=0.135 Sum_probs=101.9
Q ss_pred EEeeCCCcEEEEEEEeeC----CCCceeEEEEcCCccccccC---------CceEEe-CCceeEEEEecCCCCcCeEEEE
Q psy11549 69 VGASRSESVDIHCAVEAD----PPARSFKWKFNNSGETLDVG---------SERFSS-GSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~----~~~~~~~W~~~~~~~~~~~~---------~~~~~~-~~~~~~l~i~~~~~~d~g~y~C 134 (261)
+.+..|+++.|.|.+... +.+ .+.|++++........ ..+... ......|.|.++..+|+|.|+|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~-~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQT-RIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHC-EEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred EEEEeCCCEEEecccCCCccccccc-EEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 567899999999998643 334 7999987642110000 111111 2234579999999999999999
Q ss_pred EEEcCCceEEe---eEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce-eEEEecCCC
Q psy11549 135 AAQNAIGTQVT---PCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL-LVNLTNLDT 210 (261)
Q Consensus 135 ~~~~~~~~~~~---~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 210 (261)
.+.+..|.... ...+.+.+..++..|.........|+.+.|.|.+ .++.|..-+.|+++...... .........
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~~~l~C~~--~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~ 160 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICST--SGGFPEPHLSWLENGEELNAINTTVSQDPE 160 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEEEEECSSTTEEEEEEEE--EEESSCEEEEEEESSCEECCSEEEEEECTT
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceEeccCCCCCeEEEEEec--CCccCCCEEEEEECCEECccccceEEecCC
Confidence 99997654322 3356666656555554433333568899999997 44666554555555332221 111111111
Q ss_pred -CcEEE---cCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 211 -PAFTL---EDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 211 -~~~~i---~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
..+.+ ..++..|.|.| +|.|.|..|...
T Consensus 161 ~~~~~~~~~~~v~~~d~g~Y--~C~a~n~~~~~s 192 (201)
T 1dr9_A 161 TELYAVSSKLDFNMTTNHSF--MCLIKYGHLRVN 192 (201)
T ss_dssp TCCEEEEEEEEEETTSCEEE--EEEEEETTCCEE
T ss_pred CcEEEEEEEEEEEecCCCEE--EEEEecCcceee
Confidence 33222 23345788999 999999998654
No 218
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.68 E-value=9.4e-17 Score=121.23 Aligned_cols=217 Identities=14% Similarity=0.107 Sum_probs=82.0
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCc--eeEEEEcC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPAR--SFKWKFNN 98 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~--~~~W~~~~ 98 (261)
.|.|.+++.+ |.|+|++. ..+...+..+.|.|..+|...........+.+|+.++|.|.+.+..++. +|.|++++
T Consensus 51 ~~~l~~v~~~--~~y~C~~~-~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~ 127 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSN-CPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (291)
T ss_dssp EEEEESCCSC--CCCEEEEE-CSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSS
T ss_pred EEEEEecccC--CeEEEEEE-cCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECC
Confidence 4888998854 46999985 4445557778899988876543332213377899999999999886643 58999987
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCce------EEeeEEEEEEeCCCCCC-CCcce-EEeecC
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGT------QVTPCLYQVVLAGKPQP-PQNCS-VRNETT 170 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~------~~~~~~~~v~~~~~p~~-p~~~~-v~~~~~ 170 (261)
..... ...........|.+.....++.+.|+|+|.+..+. ...+....+.|..+|.. +.... .....|
T Consensus 128 ~~l~~----~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG 203 (291)
T 1mq8_A 128 KELKR----EPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVD 203 (291)
T ss_dssp SEEEE----EECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------
T ss_pred EEeec----ccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCC
Confidence 42111 11111222345777777777778999999986552 11223445556555432 22110 012359
Q ss_pred CeEEEEeecCCCCCCCeE--EEEEEEeCCccceeEEEecCCCCcEEEcCC---CCCCccEEEEEEEEEcCCCcCCceeee
Q psy11549 171 SSVHISCTPGYDGGLPQT--FTLELYSASDLNLLVNLTNLDTPAFTLEDL---GLDGTVLMRVVISGVNAKGRSLPVIWD 245 (261)
Q Consensus 171 ~~~~l~c~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~l~~~~~Y~~~~~a~N~~G~~~~s~~~ 245 (261)
+.++|+|.. ++..|.. ..+|+++...... .... ....+++... ..++.+.|++.|.|.|.....+....+
T Consensus 204 ~~v~l~C~~--~g~~P~~~~~v~w~~~g~~l~~--~~~~-~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l 278 (291)
T 1mq8_A 204 TQGTVVCSL--DGLFPVSEAQVHLALGDQRLNP--TVTY-GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTV 278 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEEEc--CCCCCCcccEEEEEECCEecCc--eeee-cCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEE
Confidence 999999998 5555653 3344433332211 1111 1233444331 133577888899999866666777766
Q ss_pred eeee
Q psy11549 246 DFSM 249 (261)
Q Consensus 246 ~~~~ 249 (261)
.++.
T Consensus 279 ~v~~ 282 (291)
T 1mq8_A 279 TIYS 282 (291)
T ss_dssp ----
T ss_pred EEEc
Confidence 6654
No 219
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=6.7e-15 Score=104.33 Aligned_cols=162 Identities=10% Similarity=0.157 Sum_probs=101.8
Q ss_pred EEeeCCCcEEEEEEEeeCCCC-ceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 69 VGASRSESVDIHCAVEADPPA-RSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
..+.+|+.+.|.|.+.+.+.+ ..+.|++++. .+.... .......|.|. ..+|+|.|+|.+.+... .
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~--~l~~~~----~~~~~~~l~i~--~~~d~G~Y~C~~~n~~~---~-- 74 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGV--VLKEDA----LPGQKTEFKVD--SDDQWGEYSCVFLPEPM---G-- 74 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSE--EEECTT----CCCSEEEEEEC--GGGCCEEEEEEEESTTS---C--
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCE--Eeeccc----ccCCcEEEEEe--chhhCeEEEEEEECCcC---c--
Confidence 456789999999999887654 2799998763 221111 11123356565 58999999999998322 2
Q ss_pred EEEEEeCCCCCCCCc-ceEEeecCCeEEEEeecCCCCCC-CeEEEEEEEeCCcc--------ceeE-EEecCCCCcEEEc
Q psy11549 148 LYQVVLAGKPQPPQN-CSVRNETTSSVHISCTPGYDGGL-PQTFTLELYSASDL--------NLLV-NLTNLDTPAFTLE 216 (261)
Q Consensus 148 ~~~v~~~~~p~~p~~-~~v~~~~~~~~~l~c~~~~~~~~-p~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~i~ 216 (261)
.+.+.+..+|..... .......|+.+.|.|.+ .+.. +..+.| ++..... ...+ .........|.|.
T Consensus 75 ~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~--~g~p~~~~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 151 (184)
T 3b5h_A 75 TANIQLHGPPRVKAVKSSEHINEGETAMLVCKS--ESVPPVTDWAW-YKITDSEDKALMNGSESRFFVSSSQGRSELHIE 151 (184)
T ss_dssp EEEEEECCSCCCEESCSEEEECTTSCEEEEEEC--CCSSCCCEEEE-EECCSSSCEECCTTGGGTEEEEEETTEEEEEEC
T ss_pred EEEEEEecCCceeecCCCcEEcCCCcEEEEEEE--CCCCCCCeEEE-EEcCCCCCEEeecCCCCEEEEEecCCeeEEEEe
Confidence 334555555642111 12334569999999997 4434 234444 4411111 0112 1122233589999
Q ss_pred CCC-CCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 217 DLG-LDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 217 ~~~-l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+++ ..|.|.| +|.|.|..|....+..+.|.
T Consensus 152 ~v~~~~d~G~Y--~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 152 NLNMEADPGQY--RCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp SCCTTTSSEEE--EEEEEETTEEEEEEEEEEEC
T ss_pred eccccccCceE--EEEEEeCCCcceEEEEEEEe
Confidence 998 7999999 99999999988777666654
No 220
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.68 E-value=1.4e-15 Score=112.43 Aligned_cols=119 Identities=19% Similarity=0.226 Sum_probs=82.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc----eeeeEEEEEEeec------------eeecCceeEEEeeCCCcEEEEEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA----TSNQLKLRVKYAP------------ICKSDRIVIVGASRSESVDIHCAV 83 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~----~s~~~~l~V~~~p------------~~~~~~~~~~~~~~g~~~~l~C~~ 83 (261)
.+|.|.+++.+|+|.|+|.+.|..+.. ......|.|...+ .+...+.. +.+.+|++++|.|.+
T Consensus 73 ~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~-~~v~~G~~v~L~C~~ 151 (238)
T 2p1y_A 73 FSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQS-LTVWEGETAILNCSY 151 (238)
T ss_dssp CEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSE-EEEETTSCEEEEEEC
T ss_pred EEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCce-EEEeCCCeEEEEEEE
Confidence 489999999999999999999876521 1234577776543 22222222 668899999999999
Q ss_pred eeCCCCceeEEEEcCCccccc-----------cCCceEEe----CCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 84 EADPPARSFKWKFNNSGETLD-----------VGSERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 84 ~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
.+.+.+ .+.|++++.+.... ....++.. ......|.|.++..+|+|.|+|.|.|..
T Consensus 152 ~~~p~~-~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 152 ENSAFD-YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CCTTCC-EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred ecCCCC-cEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 998887 89999865321110 01122222 2335689999999999999999999873
No 221
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.68 E-value=6.9e-15 Score=120.65 Aligned_cols=124 Identities=16% Similarity=0.168 Sum_probs=76.3
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC-----------c-ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG-----------E-ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAV 83 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~-----------~-~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~ 83 (261)
.+|.|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+............|+.+.|.|.+
T Consensus 80 ~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~ 159 (512)
T 1zvo_C 80 FSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLI 159 (512)
T ss_pred EEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEE
Confidence 4899999999999999999987642 1 112345777763 33333111100001246899999999
Q ss_pred eeC-CCCceeEEEEcCCccccccCCceEEe-CC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 84 EAD-PPARSFKWKFNNSGETLDVGSERFSS-GS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 84 ~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~-~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.+. |.+..+.|++++....... ...... .+ ..+.|.|.....+ .|.|+|.|.|..+....
T Consensus 160 ~g~~P~p~~v~W~~~~~~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~ 224 (512)
T 1zvo_C 160 TGYHPTSVTVTWYMGTQSQPQRT-FPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKK 224 (512)
T ss_pred EeeecCceEEEEEcCcccCceEe-cCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceE
Confidence 987 4445899998543211100 011111 11 1235788877776 89999999998776544
No 222
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.68 E-value=1.3e-14 Score=108.44 Aligned_cols=160 Identities=18% Similarity=0.190 Sum_probs=98.7
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc------------cCCceEE----eCCceeEEEEecCCCCcCeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD------------VGSERFS----SGSRGSMLRYTPVTELDYGTL 132 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~------------~~~~~~~----~~~~~~~l~i~~~~~~d~g~y 132 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++...+.... ....++. .......|.|.++..+|+|.|
T Consensus 13 ~~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y 91 (256)
T 3tf7_C 13 VTVSEGASLQLRCKYSYSATP-YLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVY 91 (256)
T ss_dssp EEEETTSCEEECCEEECSSCC-EEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEE
T ss_pred EEecCCCeEEEEEEeCCCCCc-eEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEE
Confidence 678899999999999988777 89999843221110 0011222 234456799999999999999
Q ss_pred EEEEEcCCce----EEeeEEEEEEeC------------------CCCC---CCCcceEEeecCCeEEEEeecCCCCCCCe
Q psy11549 133 SCAAQNAIGT----QVTPCLYQVVLA------------------GKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQ 187 (261)
Q Consensus 133 ~C~~~~~~~~----~~~~~~~~v~~~------------------~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~ 187 (261)
+|.+.+..+. ......+.|... .+|. .|.. +....|+.++|.|.+ .+. +.
T Consensus 92 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~--~~v~~G~~v~L~C~~--~~~-~~ 166 (256)
T 3tf7_C 92 FCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRN--KVTVTGENVTLSCRQ--TNS-HN 166 (256)
T ss_dssp EEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSE--EEEETTCCEEECEEE--CSC-CS
T ss_pred EEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCE--EEEeCCCcEEEEEEc--CCC-ce
Confidence 9999986531 112223444321 1111 2222 233469999999997 333 33
Q ss_pred EEEEEEEeC-CccceeEEE--------------------ecCCCCcEEEcCCCCCCccEEEEEEEEEcCCC
Q psy11549 188 TFTLELYSA-SDLNLLVNL--------------------TNLDTPAFTLEDLGLDGTVLMRVVISGVNAKG 237 (261)
Q Consensus 188 ~~~~~~~~~-~~~~~~~~~--------------------~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G 237 (261)
. +.|++.. +........ .......|.|.+++.+|+|.| +|.|.|..|
T Consensus 167 ~-v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~n~~g 234 (256)
T 3tf7_C 167 Y-MYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLY--FCASSDAPG 234 (256)
T ss_dssp E-EEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEE--EEEEEEETT
T ss_pred E-EEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEE--EEEecCCCC
Confidence 3 3444432 222111110 012334799999999999999 999999876
No 223
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.68 E-value=5.2e-16 Score=119.63 Aligned_cols=173 Identities=12% Similarity=0.112 Sum_probs=103.0
Q ss_pred EEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCe
Q psy11549 51 LKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYG 130 (261)
Q Consensus 51 ~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 130 (261)
+...+..+|.+...+. ..+..|++++|.|.+.+. .+ .+.|++++..... . .........|.|.++..+|+|
T Consensus 17 ~~~~~~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~-~~-~~~W~k~g~~~~~---~--~~~~~~~~~L~I~~v~~~D~G 87 (316)
T 3vh8_G 17 SHMGGQDKPFLSAWPS--AVVPRGGHVTLRCHYRHR-FN-NFMLYKEDRIHIP---I--FHGRIFQESFNMSPVTTAHAG 87 (316)
T ss_dssp -------CCEEEEESC--SEEETTSCEEEEEEBTTB-CC-SEEEEESSCSSSC---H--HHHCCBSSCEEECSCCGGGCE
T ss_pred cccCCCCCCEeeccCC--CccCCCCCEEEEEEccCC-Cc-eEEEEeCCCccce---e--ecCCcceEEEEECCCCcccCe
Confidence 3444555666654433 246799999999999887 34 7999998753111 0 011122347999999999999
Q ss_pred EEEEEEEcCCc---eEEeeEEEEEEeCCCCCCCCcce---EEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccc-eeE
Q psy11549 131 TLSCAAQNAIG---TQVTPCLYQVVLAGKPQPPQNCS---VRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLN-LLV 203 (261)
Q Consensus 131 ~y~C~~~~~~~---~~~~~~~~~v~~~~~p~~p~~~~---v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~-~~~ 203 (261)
.|+|.+.+..+ ....+..+.+.+...+.+|.... .....|+.++|.|.+ .+.+..+.|+ +...... ...
T Consensus 88 ~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~---~~~~~~~~w~-k~g~~~~~~~~ 163 (316)
T 3vh8_G 88 NYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWS---DIMFEHFFLH-KEGISKDPSRL 163 (316)
T ss_dssp EEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEE---SSCCSEEEEE-ETTCCSCCEEE
T ss_pred EEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcC---CCCCcEEEEE-ECCCcccccee
Confidence 99999986422 11122234444434333332110 012469999999997 2345556554 4333221 111
Q ss_pred --E-EecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 204 --N-LTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 204 --~-~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
. ........|.|.+++..|.|.| +|.|.|..|.
T Consensus 164 ~~~~~~~~~~~~L~i~~v~~~D~G~Y--~C~a~n~~g~ 199 (316)
T 3vh8_G 164 VGQIHDGVSKANFSIGPMMLALAGTY--RCYGSVTHTP 199 (316)
T ss_dssp ECEEETTEEEEEEEECSCCGGGCEEE--EEEEECTTCT
T ss_pred eeeecCCCceEEEEECCCChhhCceE--EEEEecCCCC
Confidence 1 1111336799999999999999 9999999885
No 224
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.67 E-value=4.1e-15 Score=107.98 Aligned_cols=174 Identities=12% Similarity=0.076 Sum_probs=106.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCc--eeEEEEcCCcccccc---------------CCceEEe-----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADPPAR--SFKWKFNNSGETLDV---------------GSERFSS-----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~--~~~W~~~~~~~~~~~---------------~~~~~~~-----~~~~~~l~i~~~~~ 126 (261)
+.+..|++++|.|.+.+.+.+. .+.|++++....... ...++.. ......|.|.++..
T Consensus 9 vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~ 88 (218)
T 4frw_A 9 VTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQ 88 (218)
T ss_dssp EEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCG
T ss_pred EEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccH
Confidence 6788999999999999887652 489998765322100 0011111 12234699999999
Q ss_pred CcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEE
Q psy11549 127 LDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVN 204 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~ 204 (261)
+|+|.|.|.+.+..+....... .+.+..++. ...........+..+.+.|.+ .+.|...+.|++..........
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~---~g~p~p~i~W~~~~~~~~~~~~ 164 (218)
T 4frw_A 89 ADEGEYECRVSTFPAGSFQARL-RLRVLVPPLPSLNPGPALEEGQGLTLAASCTA---EGSPAPSVTWDTEVKGTTSSRS 164 (218)
T ss_dssp GGCEEEEEEEEEETTEEEEEEE-EEEEEBCCCCEEEECSCEETTCCSEEEEEEEE---EEBSCCEEEEEESSCCEEEEEE
T ss_pred HHCCceeEEEEeccCceeeeEE-EEEEeeeccceeeeeeeeeeeeccccceeeec---cCCcCceEEEEECCcccccCce
Confidence 9999999999876554443222 222222222 111223334568889999997 3344333344454333221111
Q ss_pred EecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 205 LTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 205 ~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.... ....|.|..+...|+|.| +|.|.|++|..+....+.+.
T Consensus 165 ~~~~~~~~~~s~L~i~~~~~~d~g~Y--tC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 165 FKHSRSAAVTSEFHLVPSRSMNGQPL--TCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EECSSSEEEEEEEEECCCGGGTTCEE--EEEEECTTCSSCEEEEEECC
T ss_pred EecCCcEEEEEEEEEeeCCHHhCeEE--EEEEEeCCCCeEEEEEEEEE
Confidence 1111 124688999889999999 99999999987665555443
No 225
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.67 E-value=2.9e-16 Score=114.81 Aligned_cols=132 Identities=23% Similarity=0.255 Sum_probs=86.9
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEee---ceeecCceeEEEeeCCCcEEEEEEE-eeCCCCceeEE
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYA---PICKSDRIVIVGASRSESVDIHCAV-EADPPARSFKW 94 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~---p~~~~~~~~~~~~~~g~~~~l~C~~-~~~~~~~~~~W 94 (261)
+.+|.|.+++.+|+|.|+|.+.+... . +..+.|.|..+ |.+..... ..+..|+.+.|.|.+ .+.|.+ .+.|
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~-~-~~~~~l~V~~~~~~p~i~~~~~--~~v~~G~~~~l~C~~~~g~P~~-~v~W 145 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDF-D-SAAVSLQVAAPYSKPSMTLEPN--KDLRPGNMVTITCSSYQGYPEA-EVFW 145 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCC-C-CCCCCCCCCBCCCCCEEECCC-------CCSEEEEEEEEEEEBSCC-EEEE
T ss_pred eEEEEECCcccccCEEEEEEEEeCCC-c-eEEEEEEEEcCCCCCcEEeCCC--ceecCCceEEEEEecccccCCC-eEEE
Confidence 56899999999999999999998632 2 44566777654 44433322 356789999999999 676777 8999
Q ss_pred EEcCCccccccCCce-EE--eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 95 KFNNSGETLDVGSER-FS--SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 95 ~~~~~~~~~~~~~~~-~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
++++. ..+...... .. ..+....|.|.++..+|.|.|+|.|.|..|.... .+.+.+..+|.
T Consensus 146 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~p~ 209 (222)
T 4i0k_A 146 KDGQG-VPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDA--HGSVTITGQPL 209 (222)
T ss_dssp ECTTS-CBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEE--EEEEECCC---
T ss_pred EcCCC-ccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCce--EEEEEEeCCcc
Confidence 87432 222111111 11 1222345788999999999999999999988777 44555555553
No 226
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.67 E-value=1.6e-15 Score=113.58 Aligned_cols=154 Identities=14% Similarity=0.099 Sum_probs=103.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+.+|+.+.|.|.+.+.+.+..+.|++++.. +.. ....|.|.++..+|+|.|+|.+.+..+... ..
T Consensus 11 ~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~--~~~---------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~--~~ 77 (262)
T 3rjd_A 11 VSVFQEETVTLHCEVLHLPGSSSTQWFLNGTA--TQT---------STPSYRITSASVNDSGEYRCQRGLSGRSDP--IQ 77 (262)
T ss_dssp SEEETTCCEEEEEECSSCCCTTCEEEEETTEE--CSC---------CSSEEEESSCCGGGCEEEEEEESSSCCCCC--EE
T ss_pred EEeeCCCeEEEEEECCCCCCCceEEEEECCEE--eec---------cCCeEEEecCCcccCeEEEEEEecCCcccc--EE
Confidence 45779999999999998877668999997642 211 133699999999999999999998654432 23
Q ss_pred EEEEeCCCCC--CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEE
Q psy11549 149 YQVVLAGKPQ--PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 149 ~~v~~~~~p~--~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y 226 (261)
+.+. .++. .|....+ ..|+.+.|.|.. ..+.|.....|++..... .. ......+.|.+++..|.|.|
T Consensus 78 l~v~--~~~~~~~~~~~~~--~~g~~v~l~C~~--~~~~p~~~v~W~~~g~~~--~~---~~~~~~l~i~~~~~~d~G~Y 146 (262)
T 3rjd_A 78 LEIH--RGWLLLQVSSRVF--TEGEPLALRCHA--WKDKLVYNVLYYRNGKAF--KF---FHWNSNLTILKTNISHNGTY 146 (262)
T ss_dssp EEEE--CSSEEEEESCSEE--ETTSCEEEEEEE--GGGCCCEEEEEEETTEEE--EE---EEECCCEEESSCCGGGCEEE
T ss_pred EEEe--ccceEecCCCeEE--ecCCeEEEEEEc--cCCCCCceEEEEECCccc--cc---cCCCCeEEEEECChhhCEEE
Confidence 3333 3321 2222233 459999999996 345554444444433222 11 11247899999999999999
Q ss_pred EEEEEEEcCCCcCCceeeeeee
Q psy11549 227 RVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 227 ~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+|.|.|..|.......+.+.
T Consensus 147 --~C~~~n~~~~~~~~~~l~V~ 166 (262)
T 3rjd_A 147 --HCSGMGKHRYTSAGISVTVK 166 (262)
T ss_dssp --EEEEESSSEEEEECEEEEEE
T ss_pred --EEEEeCCCCccccceEEEec
Confidence 99999999755554455444
No 227
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.67 E-value=2.5e-15 Score=112.30 Aligned_cols=119 Identities=17% Similarity=0.255 Sum_probs=82.5
Q ss_pred eEEEccCCCCCCEeEEEEEEeC-----------CCcceeeeEEEEEEeec---------------eeecCceeEEEeeCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINT-----------KGEATSNQLKLRVKYAP---------------ICKSDRIVIVGASRS 74 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~-----------~~~~~s~~~~l~V~~~p---------------~~~~~~~~~~~~~~g 74 (261)
+|.|.+++.+|+|.|+|.+.+. ........+.|.|...+ .+...+.. ..+.+|
T Consensus 86 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G 164 (256)
T 3juy_B 86 YMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGT-LSLSPG 164 (256)
T ss_dssp EEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSE-EEECTT
T ss_pred EEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCe-EEEeCC
Confidence 6999999999999999999886 12222345678887632 22222222 678899
Q ss_pred CcEEEEEEEeeCCCCceeEEEEcCCcccccc-----------CCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 75 ESVDIHCAVEADPPARSFKWKFNNSGETLDV-----------GSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 75 ~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-----------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
++++|.|.+.+.+....+.|++...+..... ...++. .......|.|.++..+|+|.|+|.+.+..
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 9999999999877623899998432211110 112222 23345579999999999999999999854
No 228
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.66 E-value=1.8e-15 Score=114.32 Aligned_cols=119 Identities=16% Similarity=0.159 Sum_probs=80.9
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece-------------eecCceeEEEeeCCCcEEEEEEEeeCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI-------------CKSDRIVIVGASRSESVDIHCAVEADP 87 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~~ 87 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|...|. +.........+.+|++++|.|.+.+.+
T Consensus 83 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~ 162 (276)
T 3auv_A 83 TLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFT 162 (276)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSC
T ss_pred EEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCcc
Confidence 8999999999999999999987654334446777776532 111111125688999999999999876
Q ss_pred C-CceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 88 P-ARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 88 ~-~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
+ ...+.|++++.+.... ....++... .....|.|.++..+|+|.|+|.+.|.
T Consensus 163 ~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 163 ISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp GGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred CCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 3 2389999864221110 012233322 23457999999999999999999997
No 229
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.66 E-value=7.1e-16 Score=111.96 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=81.4
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWK 95 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~ 95 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|. .+|.+...... .....|+.++|.|.+.+.++ +..+.|+
T Consensus 74 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 152 (212)
T 1q0x_L 74 ALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPS-SEELSTAKATLVCTITDFYPGVVTVDWK 152 (212)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCC-HHHccCCcEEEEEEEEEEeCCCeEEEEE
Confidence 899999999999999999998876443445567774 34443321111 12346899999999998654 3489999
Q ss_pred EcCCccccccCCc--eEEeCC-----ceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 96 FNNSGETLDVGSE--RFSSGS-----RGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 96 ~~~~~~~~~~~~~--~~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
+++.. +..... ...... ..+.|.|.....+|.|.|+|.|.|......
T Consensus 153 k~g~~--l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 153 VDGTP--VTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp ETTEE--ECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred ECCEe--CCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 98742 211110 011111 124688998888999999999999765433
No 230
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.66 E-value=8.5e-16 Score=112.94 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=83.2
Q ss_pred EEECCeEEEccCCCCCCEeEEEEEEeCC-CcceeeeEEEEEEeecee---ecCceeEEEeeCCCcE-EEEEEE-eeCCCC
Q psy11549 16 ILSNQSLVLQKVSRQSAGTYKCSAINTK-GEATSNQLKLRVKYAPIC---KSDRIVIVGASRSESV-DIHCAV-EADPPA 89 (261)
Q Consensus 16 ~~~~~~L~i~~~~~~D~G~Y~C~~~~~~-~~~~s~~~~l~V~~~p~~---~~~~~~~~~~~~g~~~-~l~C~~-~~~~~~ 89 (261)
...++.|.|.+++.+|+|.|+|.+.+.. +.. +..+.|.|..+|.. ...... ..+..|+.+ .|.|.+ .+.|.|
T Consensus 73 ~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~-~~~~~l~V~~~p~~~~~~~~~~~-~~~~~g~~~~~l~C~~~~~~p~p 150 (231)
T 2pet_A 73 LDSQGRLVLAEAQVGDERDYVCVVRAGAAGTA-EATARLNVFAKPEATEVSPNKGT-LSVMEDSAQEIATCNSRNGNPAP 150 (231)
T ss_dssp ECTTCCEEESSCCGGGCEEEEEEEECGGGCEE-EEEEEEEEEBCCCCCEEEECCSS-CCTTCCSEEEEEEEEEEEEBSCC
T ss_pred cCCCceEEEcccCcccCceEEEEEEecCCCce-EEEEEEEEEecCCCcEEecCCcc-eeecCCCceEEEEEEeECcccCC
Confidence 3445679999999999999999999987 544 67788999877542 222221 335578887 999999 788877
Q ss_pred ceeEEEEcCCcccccc-CCceEEeC------Cc-----eeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 90 RSFKWKFNNSGETLDV-GSERFSSG------SR-----GSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~-~~~~~~~~------~~-----~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
.+.|++++....... ...++... .. .+.|.|.....+|.|.|+|.|.|.
T Consensus 151 -~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 151 -KITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp -EEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred -EEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 899999874322111 00121111 10 145788766666799999999994
No 231
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.66 E-value=5e-16 Score=113.12 Aligned_cols=119 Identities=14% Similarity=0.142 Sum_probs=79.1
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC-cceeeeEEEEEE---eeceeecCceeEEEeeCCCcEEEEEEEeeCC-CCceeEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG-EATSNQLKLRVK---YAPICKSDRIVIVGASRSESVDIHCAVEADP-PARSFKWK 95 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~-~~~s~~~~l~V~---~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~~~~~W~ 95 (261)
+|.|.+++.+|+|.|+|.+.|..+ ........|.|. .+|.+...... .....|+.++|.|.+.+.+ ++..+.|+
T Consensus 73 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 151 (216)
T 2xzc_L 73 TLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWK 151 (216)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC-hhhccCCcEEEEEEEEeEcCCceEEEEE
Confidence 899999999999999999999876 222334567775 23443321111 1123588999999999854 44489999
Q ss_pred EcCCccccccC-Cce--EEeC-C----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 96 FNNSGETLDVG-SER--FSSG-S----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 96 ~~~~~~~~~~~-~~~--~~~~-~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
+++.. +... ... .... + ..+.|.|..+..+|.|.|+|.|.|....
T Consensus 152 k~g~~--~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 152 VDNAL--QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp ETTEE--CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ECCee--cCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 98742 2111 000 0111 1 1236889999999999999999997644
No 232
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.66 E-value=1.6e-15 Score=113.92 Aligned_cols=117 Identities=19% Similarity=0.198 Sum_probs=88.6
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCC-Ccce--eeeEEEEEEeeceeecCc-eeEEEeeCCCcEEEEEEEeeCCCCceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTK-GEAT--SNQLKLRVKYAPICKSDR-IVIVGASRSESVDIHCAVEADPPARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~-~~~~--s~~~~l~V~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~ 95 (261)
+.|.|..+..+|+|.|+|.|.|.. |... +..+.|.|.++|.+.... .....+.+|+.+.|.|.+.+.|.| .+.|+
T Consensus 142 ~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p-~i~W~ 220 (265)
T 2oz4_A 142 AQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLP-ELKCL 220 (265)
T ss_dssp ECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCC-EEEEE
T ss_pred EEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCC-eEEEE
Confidence 468899999999999999998654 6542 367889999988875432 223678899999999999999988 89999
Q ss_pred EcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE
Q psy11549 96 FNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v 151 (261)
+++.. . .. .+ .+ ..+..+|+|.|+|.|.|..|.......+.|
T Consensus 221 ~~~~~-~--~~------~g---~~--~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 262 (265)
T 2oz4_A 221 KDGTF-P--LP------IG---ES--VTVTRDLEGTYLCRARSTQGEVTREVTVNV 262 (265)
T ss_dssp ETTTE-E--CC------TT---SC--EECCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ECCcc-c--CC------CC---cE--EEeehhhCeEEEEEEECCCCcEEEEEEEEE
Confidence 98751 1 11 11 12 237789999999999999988777544444
No 233
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.66 E-value=2.2e-15 Score=109.37 Aligned_cols=164 Identities=15% Similarity=0.160 Sum_probs=100.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+..|+.+.|.|.+.+.+.+ .+.|++.+.+.... ....++. .......|.|.++..+|+|.|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 11 LSVTPGNSVSLSCRASQSIGN-NLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp EEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeCCCcEEEEEECCCCCCC-CEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEe
Confidence 668899999999999998877 79999865322110 0012222 233455899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCCCCCCcceEE-----eecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee-E---EE
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKPQPPQNCSVR-----NETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL-V---NL 205 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~-----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~-~---~~ 205 (261)
+.+..+..... ...+.+...+.+|.. .+. ...|..++|.|.+ .+..|.. ...|+++....... . ..
T Consensus 90 ~~~~~~~~~~~-~~~l~V~~~~~~p~v-~~~~~~~~~~~g~~~~l~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 165 (213)
T 3d9a_L 90 QSNSWPYTFGG-GTKLEIKRADAAPTV-SIFPPSSEQLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTD 165 (213)
T ss_dssp ECSSSSCEECC-CEEEEECCCCBCCEE-EEECCCHHHHHTTEEEEEEEE--EEEBSSCCEEEEEETTEEECTTEEEEECC
T ss_pred eecCCcceeCC-CEEEEEecCCCCcee-EeECCChhhcCCCcEEEEEEE--eeecCCceEEEEEcCCCcCcceeeecCCC
Confidence 99986643321 123334333323321 111 1247899999997 3334432 33444443221111 1 11
Q ss_pred ecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 206 TNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 206 ~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
..... ..|.|.++..+|+|.| +|.|.|.....
T Consensus 166 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y--~C~a~n~~~~~ 203 (213)
T 3d9a_L 166 QDSKDSTYSMSSTLTLTKDEYERHNSY--TCEATHKTSTS 203 (213)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHHCCEE--EEEEECTTCSS
T ss_pred ccCCCCCEEEEEEEEEeccccCCCCEE--EEEEEEccCCC
Confidence 11111 2788888888899999 99999988765
No 234
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=2.2e-15 Score=96.82 Aligned_cols=95 Identities=21% Similarity=0.317 Sum_probs=69.5
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-CCceEEeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-GSERFSSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
.+|.+...+.. +.+.+|+.+.|.|.+.+.|.| .+.|++++.. +.. ....+...+....|.|.++..+|+|.|+|.
T Consensus 12 ~pP~f~~~p~~-~~v~~G~~~~l~C~~~G~P~p-~v~W~k~g~~--l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (107)
T 3knb_B 12 SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPP-VVVWEKGGQQ--LAASERLSFPADGAEHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEEEEESCC-EEEEEETTEE--CCCCSSEECCEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCc-EEEeCCCcEEEEEEEEEecCC-EEEEEECccc--ccceeeEEEeecCceEEEEEecCChhhCEEEEEE
Confidence 35666555544 678899999999999999988 8999998742 222 222233345566899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCC
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p 157 (261)
|.|..|....... |.|..+|
T Consensus 88 a~N~~G~~~~~~~--l~V~~pP 107 (107)
T 3knb_B 88 ARNAAGEAYAAAA--VTVLEPP 107 (107)
T ss_dssp EEETTEEEEEEEE--EEEEC--
T ss_pred EEECCCEEEEEEE--EEEEcCC
Confidence 9999998777544 4444443
No 235
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.65 E-value=2.7e-15 Score=111.88 Aligned_cols=183 Identities=13% Similarity=0.028 Sum_probs=106.5
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+|.+...+. ..+..|++++|.|.+.. +.+ .+.|++++....................|.|.++..+|+|.|+|.+.
T Consensus 7 kP~i~~~P~--~~V~~G~~VtL~C~~~~-~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 7 KPSLLAHPG--PLVKSEETVILQCWSDV-RFQ-HFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCEECCBSC--SEEESSCCEEEEEEESS-CCS-EEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCEEEEcCC--CEecCCCCEEEEEecCC-CCc-EEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 444443332 34679999999999874 334 89999987532110000000112234579999999999999999998
Q ss_pred cCCc---eEEeeEEEEEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE--EEe--c
Q psy11549 138 NAIG---TQVTPCLYQVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV--NLT--N 207 (261)
Q Consensus 138 ~~~~---~~~~~~~~~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~--~ 207 (261)
+... ....+..+.+.|...+.+|... ......|+.++|.|.+ .+ .+..|.| +++........ ... .
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~~~V~~G~~vtL~C~~--~~-~~~~~~w-~k~g~~~~~~~~~~~~~~~ 158 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSS--RS-SYDMYHL-SREGEAHERRFSAGPKVNG 158 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECSSCCCEEECSSCTTCBTTCEEEEEEEC--SS-CCSEEEE-EETTSSCEECCBCBCCSSS
T ss_pred ccCCCccccccCCCEEEecccCCCCcceEccCCCccCCCCEEEEEEeC--CC-CCcEEEE-EECCcccCcccccccccCC
Confidence 6421 1111223344443332222100 0012469999999997 33 3445554 45443322110 011 1
Q ss_pred CCCCcEEEcCCCCCCccEEEEEEEEEcCC---CcCCceeeeeeeeccc
Q psy11549 208 LDTPAFTLEDLGLDGTVLMRVVISGVNAK---GRSLPVIWDDFSMSGA 252 (261)
Q Consensus 208 ~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~---G~~~~s~~~~~~~~~~ 252 (261)
.....|.|.+++ |+|.| +|.|.|.. ..+..|..+++...++
T Consensus 159 ~~~~~l~I~~v~--D~G~Y--~C~a~~~~~p~~~s~~S~pl~L~V~g~ 202 (257)
T 1b6u_A 159 TFQADFPLGPAT--HGGTY--RCFGSFRDSPYEWSNSSDPLLVSVTGN 202 (257)
T ss_dssp CCBEEEEEEECC--SCEEE--EEEEECSSCTTBBCCCCCCEEECCBCC
T ss_pred ceeEEEEecccc--cCEEE--EEEEEcCCCCcccccCCCCEEEEEecc
Confidence 124689999965 99999 89998764 4677787777665544
No 236
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.65 E-value=3.4e-16 Score=111.31 Aligned_cols=142 Identities=15% Similarity=0.201 Sum_probs=93.5
Q ss_pred eeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEec-CCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 71 ASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTP-VTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
...|+.+.|.|.+.+ ++ .+.|++++.. +... ....|.|.+ +..+|+|.|+|.|.|..|.... .+
T Consensus 11 ~~~G~~v~L~C~~~~-~~--~i~W~k~g~~--l~~~--------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~--~~ 75 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-DE--NLKWEKNGQE--LPQK--------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYL--YL 75 (186)
T ss_dssp EEETTEEEEECSSCC-CT--TCEEEETTEE--ECSC--------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCE--EE
T ss_pred EeCCcEEEEEEeCCC-CC--ceEEEECCEE--CCCC--------CCCEEEECCCCccccCEEEEEEEEeCCCcEEE--EE
Confidence 367999999999987 33 4999998742 2211 123699999 9999999999999998877443 33
Q ss_pred EEEeCCCCCCC-------------------C----c--ceE-EeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE
Q psy11549 150 QVVLAGKPQPP-------------------Q----N--CSV-RNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV 203 (261)
Q Consensus 150 ~v~~~~~p~~p-------------------~----~--~~v-~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~ 203 (261)
.+.+...+.+. . . ..+ ....|+.+.|.|.+ |..-+.|+++.....
T Consensus 76 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~------p~p~i~W~k~g~~i~--- 146 (186)
T 1jbj_A 76 KARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL------TDKTIKWLKDGSIIS--- 146 (186)
T ss_dssp CCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS------SCSCEEEEETTEECC---
T ss_pred EEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC------CCCeEEEEECCEECc---
Confidence 33332211111 0 0 011 11269999999997 222233444432221
Q ss_pred EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 204 NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 204 ~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
........|.|.++...|.|.| +|.|.|..|..
T Consensus 147 -~~~~~~~~L~i~~v~~~D~G~Y--~C~a~N~~g~~ 179 (186)
T 1jbj_A 147 -PLNATKNTWNLGNNAKDPRGTY--QCQGAKETSNP 179 (186)
T ss_dssp -CSSCCSSCCEEEETTSCCEEEE--EEEESSCEEEE
T ss_pred -ccCCCcceEEECCCCcCcCEEE--EEEEEcCcCCc
Confidence 1122457899999999999999 99999999965
No 237
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.65 E-value=4.6e-18 Score=136.83 Aligned_cols=210 Identities=12% Similarity=0.060 Sum_probs=116.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---------e---ceee-cCceeEEEeeCCCcEEEEEEEeeC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---------A---PICK-SDRIVIVGASRSESVDIHCAVEAD 86 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---------~---p~~~-~~~~~~~~~~~g~~~~l~C~~~~~ 86 (261)
+.|.|.+++.+| |.|+|.|.|..+.. .....+.+.. . |.+. .++.....+..|+.+.|.|.+.+.
T Consensus 180 s~L~i~~~~~~d-g~Y~C~a~n~~~~~-~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~ 257 (434)
T 1igy_B 180 SSVTVPSSPRPS-ETVTCNVAHPASST-KVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDI 257 (434)
T ss_dssp EEEEEETTTTTS-SCCEEEEECTTTTC-CEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCC
T ss_pred EEEEEcchhcCC-CcEEEEEEeCCCCc-cceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEecc
Confidence 479999999999 99999999998874 2223332210 0 2221 111100016789999999999987
Q ss_pred CC---CceeEEEEcCCccccccCCceEE-eC----CceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 87 PP---ARSFKWKFNNSGETLDVGSERFS-SG----SRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 87 ~~---~~~~~W~~~~~~~~~~~~~~~~~-~~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
++ +..+.|++++.... ........ .. ...+.|.|.++..+|.|.|+|.|.|..+.......+.+.+ ..+.
T Consensus 258 ~p~P~~~~i~W~k~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~-~~~~ 335 (434)
T 1igy_B 258 SKDDPEVQFSWFVDNVEVH-TAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK-GKPR 335 (434)
T ss_dssp CSSCCCCCBCBBSSSCCBC-CCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCC-SCCB
T ss_pred ccCCCCeEEEEEeCCcccC-CcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccC-CCCc
Confidence 42 34799999874211 11000000 01 1134689999999999999999999877543221222210 1122
Q ss_pred CCCcceEE-----eecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeEEEe--cCCCC------cEEEcCCCCCCcc
Q psy11549 159 PPQNCSVR-----NETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLVNLT--NLDTP------AFTLEDLGLDGTV 224 (261)
Q Consensus 159 ~p~~~~v~-----~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~--~~~~~------~~~i~~~~l~~~~ 224 (261)
+|.. .+. ...+..+.|.|.+ .+..|. ..+.|+++........... ...+. .+.|.....+++|
T Consensus 336 ~P~v-~~~~~~~~~~~~~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g 412 (434)
T 1igy_B 336 APQV-YTIPPPKEQMAKDKVSLTCMI--TDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGN 412 (434)
T ss_dssp CCCC-EEECCCSSSSSSSEEEEEEEE--EEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTC
T ss_pred CCEE-EEECCCHHHhcCCcEEEEEEE--EeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCC
Confidence 2221 111 1236679999997 443443 3344455443322111111 11222 2334432234589
Q ss_pred EEEEEEEEEcCCCc
Q psy11549 225 LMRVVISGVNAKGR 238 (261)
Q Consensus 225 ~Y~~~~~a~N~~G~ 238 (261)
.| +|.|.|....
T Consensus 413 ~Y--tC~a~n~~l~ 424 (434)
T 1igy_B 413 TF--TCSVLHEGLH 424 (434)
T ss_dssp CE--EEEEEETTSG
T ss_pred EE--EEEEEcCCCC
Confidence 99 9999998754
No 238
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.65 E-value=8e-15 Score=110.81 Aligned_cols=161 Identities=16% Similarity=0.174 Sum_probs=97.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEEe--CCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFSS--GSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++.+.+.... ....++.. ......|.|.++..+|+|.|.|.
T Consensus 22 ~~v~~G~~v~L~C~~~~~p~~-~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 100 (276)
T 3auv_A 22 LSASVGDRVTITCRASQDVST-AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 100 (276)
T ss_dssp EECCTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEeEcCCCCCC-cEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEE
Confidence 668899999999999988766 89999865321110 01123322 33445799999999999999999
Q ss_pred EEcCCce-EEeeEEEEEEeCCCCC----------CCCc-----ceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeC-C
Q psy11549 136 AQNAIGT-QVTPCLYQVVLAGKPQ----------PPQN-----CSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSA-S 197 (261)
Q Consensus 136 ~~~~~~~-~~~~~~~~v~~~~~p~----------~p~~-----~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~-~ 197 (261)
+.+..+. ...... +.|..+|. +|.. ..+....|+.++|.|.+ .+..| ...+.|++.. +
T Consensus 101 ~~n~~~~~~~~~~~--l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~--~g~~~~~~~v~W~k~~~g 176 (276)
T 3auv_A 101 QHYTTPPTFGCGTK--VEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAA--SGFTISDYWIHWVRQAPG 176 (276)
T ss_dssp ECSSSSCCCCCCEE--EEC-----------------CCEEEEECCEEECTTCCEEEEEEE--ESSCGGGSEEEEEEECTT
T ss_pred EecCCcccccCCEE--EEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEe--cCccCCCCEEEEEEcCCC
Confidence 9987543 122223 33333321 1111 12234569999999997 33332 2344455542 1
Q ss_pred ccc--------------------eeEEEec---CCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 198 DLN--------------------LLVNLTN---LDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 198 ~~~--------------------~~~~~~~---~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
... ..+.... .....|.|.+++.+|+|.| .|.|.|..
T Consensus 177 ~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~n~~ 236 (276)
T 3auv_A 177 KCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVY--YCARFVFF 236 (276)
T ss_dssp CCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE--EEEEECSS
T ss_pred CCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEE--EEEEEcCc
Confidence 111 0111110 1223799999999999999 99999984
No 239
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.65 E-value=5.4e-15 Score=110.06 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=80.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeec-------------------eeecCceeEEEeeCCCcEEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAP-------------------ICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p-------------------~~~~~~~~~~~~~~g~~~~l~C 81 (261)
+|.|.+++.+|+|.|+|.+.|..+........|.|..++ .....+.. ..+.+|++++|.|
T Consensus 75 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C 153 (250)
T 3esu_F 75 SLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGP-ELVKPGASVKISC 153 (250)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCC-EEECTTCCEEEEE
T ss_pred EEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCc-eEEcCCceEEEEE
Confidence 799999999999999999998766543455677776531 11111122 5688999999999
Q ss_pred EEeeCC--CCceeEEEEcCCcccccc----------------CCceEEeC----CceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 82 AVEADP--PARSFKWKFNNSGETLDV----------------GSERFSSG----SRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 82 ~~~~~~--~~~~~~W~~~~~~~~~~~----------------~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
.+.+.+ .+ .+.|+++..+..... ...++... .....|.|.++..+|+|.|+|.+.+
T Consensus 154 ~~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 154 KDSGYAFSSS-WMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp ECCSTTGGGS-EEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EecCCcccCC-EEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 998866 45 899998732211110 01222221 3345799999999999999999997
No 240
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.65 E-value=3.7e-15 Score=112.86 Aligned_cols=118 Identities=15% Similarity=0.226 Sum_probs=81.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeC--------CCcceeeeEEEEEEe---------------eceeecCceeEEEeeCCCcE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINT--------KGEATSNQLKLRVKY---------------APICKSDRIVIVGASRSESV 77 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~--------~~~~~s~~~~l~V~~---------------~p~~~~~~~~~~~~~~g~~~ 77 (261)
+|.|.+++.+|+|.|+|.+.+. ..........|.|.. ++.+...+ . ..+.+|+++
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p-~-~~v~~G~~v 157 (280)
T 3fku_X 80 YMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP-S-VSKGLRQTA 157 (280)
T ss_dssp EEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS-E-EEECTTCCE
T ss_pred EEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC-c-EEEecCCCE
Confidence 7999999999999999999886 112223345677765 33333333 2 678899999
Q ss_pred EEEEEEee-CCCCceeEEEEcCCcccccc-----------CCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 78 DIHCAVEA-DPPARSFKWKFNNSGETLDV-----------GSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 78 ~l~C~~~~-~~~~~~~~W~~~~~~~~~~~-----------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+|.|.+.+ .+....+.|++...+..... ...++. .......|.|.++..+|+|.|+|.+.+..
T Consensus 158 ~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 158 TLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp EEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred EEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 99999988 44323899997432221110 012222 23345579999999999999999999865
No 241
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.65 E-value=3.6e-15 Score=111.47 Aligned_cols=118 Identities=16% Similarity=0.193 Sum_probs=80.1
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcc--eeeeEEEEEEeece---------------------eecCceeEEEeeCCCcE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEA--TSNQLKLRVKYAPI---------------------CKSDRIVIVGASRSESV 77 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~--~s~~~~l~V~~~p~---------------------~~~~~~~~~~~~~g~~~ 77 (261)
+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|..++. +..+. . ..+.+|+++
T Consensus 75 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~v~~G~~v 152 (256)
T 3ux9_B 75 SLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESG-G-GLVQPGGSL 152 (256)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEEC-C-EEECTTCCE
T ss_pred EEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCC-C-eEEcCCCeE
Confidence 79999999999999999999875432 23456788876542 22211 1 447899999
Q ss_pred EEEEEEeeCCC-CceeEEEEcCCcccccc----------------CCceEEe----CCceeEEEEecCCCCcCeEEEEEE
Q psy11549 78 DIHCAVEADPP-ARSFKWKFNNSGETLDV----------------GSERFSS----GSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 78 ~l~C~~~~~~~-~~~~~W~~~~~~~~~~~----------------~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+|.|.+.+.+. ...+.|++...+..... ...++.. ......|.|.++..+|+|.|+|.+
T Consensus 153 ~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 232 (256)
T 3ux9_B 153 RLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR 232 (256)
T ss_dssp EEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEE
Confidence 99999998662 23899998643221100 0112222 134557999999999999999999
Q ss_pred EcCC
Q psy11549 137 QNAI 140 (261)
Q Consensus 137 ~~~~ 140 (261)
.+..
T Consensus 233 ~~~~ 236 (256)
T 3ux9_B 233 YIDF 236 (256)
T ss_dssp EETT
T ss_pred EcCC
Confidence 9863
No 242
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.64 E-value=2.1e-16 Score=114.68 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=84.3
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC-cceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG-EATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFK 93 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~-~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~ 93 (261)
.+|.|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...... .....|+.+.|.|.+.+.++ ...+.
T Consensus 68 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~ 146 (211)
T 3tv3_L 68 ASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPS-SEELQANKATLVCLISDFYPGAVTVA 146 (211)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCC-HHHHHTTCEEEEEEEEEEBSSCCEEE
T ss_pred EEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCc-hhhhcCCCeEEEEEeeeecCCCeEEE
Confidence 3799999999999999999999887 333556788887 45544322211 12236999999999998643 34899
Q ss_pred EEEcCCccccccCCce-EEeCCc----eeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 94 WKFNNSGETLDVGSER-FSSGSR----GSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 94 W~~~~~~~~~~~~~~~-~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
|++++........... ...... .+.|.|..+..+|.|.|+|.|.|..+....
T Consensus 147 W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~ 203 (211)
T 3tv3_L 147 WKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 203 (211)
T ss_dssp EEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEE
T ss_pred EEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEe
Confidence 9998742111000000 011111 246888888888999999999998765544
No 243
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.64 E-value=1.8e-14 Score=106.78 Aligned_cols=166 Identities=12% Similarity=0.168 Sum_probs=98.6
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc--c---------CCceEEe--CCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD--V---------GSERFSS--GSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~--~---------~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++...+.... . ...++.. ......|.|.++..+|+|.|.|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (242)
T 2znx_A 11 LSVTPGNSVSLSCRASQSIGN-NLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (242)
T ss_dssp EEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEcCCCcEEEEEEeCCCCCc-eEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence 668899999999999988766 89999864221110 0 1223322 23455899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCCC----------CCCcce----EEeecCCeEEEEeecCCCCCC-CeEEEEEEEeC-Ccc
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKPQ----------PPQNCS----VRNETTSSVHISCTPGYDGGL-PQTFTLELYSA-SDL 199 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p~----------~p~~~~----v~~~~~~~~~l~c~~~~~~~~-p~~~~~~~~~~-~~~ 199 (261)
+.+..+..... ...+.|..+|. ++..+. .....|+.++|.|.+ .+.. +.....|++.. +..
T Consensus 90 ~~n~~~~~~~~-~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~g~~~~~~~v~W~k~~~~~~ 166 (242)
T 2znx_A 90 QSNSXPYTFGG-GTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSV--TGDSITSDYXSXIRKFPGNR 166 (242)
T ss_dssp ECSSSSCEECC-CEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEE--ESSCGGGSCEEEEEECTTSC
T ss_pred EecCCceEECC-CEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEE--EccccCCcceeeEeeCCCCC
Confidence 99875432111 22344444332 111111 123569999999997 2222 12334455532 211
Q ss_pred c-------------------eeEEEe---cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 200 N-------------------LLVNLT---NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 200 ~-------------------~~~~~~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
. ..+... ......|.|.+++.+|+|.| .|.|.|..-.+.
T Consensus 167 ~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~~~~~fG~ 227 (242)
T 2znx_A 167 LEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATY--YCANXDGDYXGQ 227 (242)
T ss_dssp EEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEE--EEEETTSSCBCC
T ss_pred cEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEE--EEeccCCcccCC
Confidence 1 011111 11224799999999999999 899998644443
No 244
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.64 E-value=4.5e-16 Score=114.24 Aligned_cols=135 Identities=14% Similarity=0.161 Sum_probs=80.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKW 94 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W 94 (261)
.+|.|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.+..+.|
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W 157 (227)
T 1mju_H 79 AYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPV-CGDTSGSSVTLGCLVKGYFPEPVTLTW 157 (227)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCC-C------CEEEEEEEEEEBSSCCEEEE
T ss_pred EEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCC-ccccCCCcEEEEEEeecEeCCCeEEEE
Confidence 48999999999999999999886432222345777764 2333321111 134579999999999986 55558999
Q ss_pred EEcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 95 KFNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
++++......... .....+ ..+.|.|.....+| |.|+|.|.|..+.... ...+.+..+|..
T Consensus 158 ~~~g~~~~~~~~~-~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~--~~~~~~~~~p~~ 221 (227)
T 1mju_H 158 NSGSLSSGVHTFP-AVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKV--DKKIEPRGPTIK 221 (227)
T ss_dssp GGGTBCTTEEECC-CEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEE--EEECCCCCC---
T ss_pred ecCCCcCCcEECC-ceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcce--EEEeCCCCCCCC
Confidence 9876431111011 111111 23468898888888 9999999997655443 344555555553
No 245
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.64 E-value=4.2e-15 Score=110.17 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=80.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece-------------eecCceeEEEeeCCCcEEEEEEEeeCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI-------------CKSDRIVIVGASRSESVDIHCAVEADP 87 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~-------------~~~~~~~~~~~~~g~~~~l~C~~~~~~ 87 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|..+|. ....+.. ..+.+|++++|.|.+.+.+
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C~~~g~~ 150 (242)
T 2znx_A 72 TLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGP-SLVKPSQTLSLTCSVTGDS 150 (242)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECC-SEECTTSCEEEEEEEESSC
T ss_pred EEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCc-ceecCCCeEEEEEEEEccc
Confidence 8999999999999999999887654333456788876553 1111111 3478999999999999876
Q ss_pred C-CceeEEEEcCCccccc---------------cCCceEEe----CCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 88 P-ARSFKWKFNNSGETLD---------------VGSERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 88 ~-~~~~~W~~~~~~~~~~---------------~~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
. ...+.|++...+.... ....++.. ......|.|.++..+|+|.|+|.+.+.
T Consensus 151 ~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 151 ITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp GGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred cCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 2 2379999854222110 01223332 233458999999999999999999874
No 246
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.64 E-value=1.7e-14 Score=104.77 Aligned_cols=174 Identities=11% Similarity=0.007 Sum_probs=103.2
Q ss_pred EEeeCCCcEEEEEEEeeC------CCCceeEEEEcCCccc----c----------ccCCceEEeC----CceeEEEEecC
Q psy11549 69 VGASRSESVDIHCAVEAD------PPARSFKWKFNNSGET----L----------DVGSERFSSG----SRGSMLRYTPV 124 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~------~~~~~~~W~~~~~~~~----~----------~~~~~~~~~~----~~~~~l~i~~~ 124 (261)
+.+.+|+.++|.|.+... .+...+.|++.+.... + .....++... .....|.|.++
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 89 (214)
T 2zg1_A 10 VTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDA 89 (214)
T ss_dssp EEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSC
T ss_pred EEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccC
Confidence 667899999999998854 1334899999764311 0 0111233332 22447999999
Q ss_pred CCCcCeEEEEEEEcCCceEEe--eEEEEEEeCCCCCCCCcceE-EeecCCeEEEEeecCCC-CCCCeEEEEEEEeCCccc
Q psy11549 125 TELDYGTLSCAAQNAIGTQVT--PCLYQVVLAGKPQPPQNCSV-RNETTSSVHISCTPGYD-GGLPQTFTLELYSASDLN 200 (261)
Q Consensus 125 ~~~d~g~y~C~~~~~~~~~~~--~~~~~v~~~~~p~~p~~~~v-~~~~~~~~~l~c~~~~~-~~~p~~~~~~~~~~~~~~ 200 (261)
..+|+|.|.|.+.+..+.... ...+.+.|..+|.+|..... ....|..++|.|.+... .+.|.....|++......
T Consensus 90 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~ 169 (214)
T 2zg1_A 90 RMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPL 169 (214)
T ss_dssp CGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSS
T ss_pred CHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccC
Confidence 999999999999987533221 11344555455444332110 12458999999997221 123433334444432211
Q ss_pred eeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 201 LLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 201 ~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.. .......+.|..+..+++|.| +|.|.|..|....+..+.+
T Consensus 170 ~~---~~~~~~~L~i~~~~~~~~g~Y--~C~a~n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 170 DP---ETTRSSELTLTPRPEDHGTNL--TCQMKRQGAQVTTERTVQL 211 (214)
T ss_dssp CS---SCCCSSEEEECCCTTCCSCEE--EEEEECC----CCEEEEEC
T ss_pred CC---CceeEEEEEEecccHHcCcEE--EEEEEeCCCCcceEEEEEE
Confidence 00 113457889999888899999 9999998876555555443
No 247
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.64 E-value=4.8e-16 Score=120.37 Aligned_cols=141 Identities=12% Similarity=0.157 Sum_probs=83.8
Q ss_pred CCCCeeccCCCCce-------EEEECCeEEEccCCCCCCEeEEEEEEeCCCcc--eeeeEEE--EEEeeceeecCceeEE
Q psy11549 1 MAGGIPLAHNTSAR-------IILSNQSLVLQKVSRQSAGTYKCSAINTKGEA--TSNQLKL--RVKYAPICKSDRIVIV 69 (261)
Q Consensus 1 ~~ng~~l~~~~~~~-------~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~--~s~~~~l--~V~~~p~~~~~~~~~~ 69 (261)
+|||++|....... ...-...|.|.....+|.|.|+|.|.|..+.. ....+.+ .+..+|.+.....
T Consensus 154 ~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~--- 230 (327)
T 2wng_A 154 FKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQ--- 230 (327)
T ss_dssp EETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEE---
T ss_pred EECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecC---
Confidence 47888885332111 11112357888888888999999999987653 2233333 3445665543222
Q ss_pred EeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccccCCceEEeC-Cc----eeEEEEecCCCCcCeEEEEEEEcCCceE
Q psy11549 70 GASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLDVGSERFSSG-SR----GSMLRYTPVTELDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~-~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 143 (261)
.+.+|+.+.|.|.+.+.++ +..+.|++++....... ...+... .. .+.|.|..+..+|.|.|+|.|.|..+..
T Consensus 231 ~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 231 PVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTET-ASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp CCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEE-CCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred CcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcc-cCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 2679999999999998654 44799999875322111 1111111 11 1458888899999999999999998765
Q ss_pred Ee
Q psy11549 144 VT 145 (261)
Q Consensus 144 ~~ 145 (261)
..
T Consensus 310 ~s 311 (327)
T 2wng_A 310 VS 311 (327)
T ss_dssp EE
T ss_pred ch
Confidence 44
No 248
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.64 E-value=6.7e-16 Score=115.29 Aligned_cols=119 Identities=20% Similarity=0.250 Sum_probs=80.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWKF 96 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~~ 96 (261)
+|.|.+++.+|+|.|+|.+.|..+........|.|.. +|.+...... .....|+.++|.|.+.+.++ +..+.|++
T Consensus 114 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k 192 (254)
T 2c1o_A 114 TLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKI 192 (254)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCC-hhhccCCcEEEEEEEecccCCCcEEEEEE
Confidence 8999999999999999999988665433445677753 3444321111 11235789999999988544 34799999
Q ss_pred cCCccccccC-CceE--EeCC-----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 97 NNSGETLDVG-SERF--SSGS-----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 97 ~~~~~~~~~~-~~~~--~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
++.. +... .... .... ..+.|.|.++..+|+|.|+|.|.|....
T Consensus 193 ~g~~--l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 193 DGSE--RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp SSSE--ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred CCCc--ccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 8752 2111 0111 0111 1357999999999999999999997654
No 249
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.64 E-value=4.7e-15 Score=107.67 Aligned_cols=163 Identities=12% Similarity=0.152 Sum_probs=99.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-----------CCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-----------GSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-----------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++...+..... ...++. .......|.|.++..+|+|.|+|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 10 VSVALGQKATITCSGDKLSDV-YVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEETTSCEEEEEECSSTTTS-CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeCCCCEEEEEEcCCCCCc-eEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 778899999999999977777 899998432111100 112222 234456799999999999999999
Q ss_pred EEcCCc---eEEeeEEEEEEeCCCC-CCCCcceEEe-----ecCCeEEEEeecCCCCCCCe-EEEEEEEeCCcccee--E
Q psy11549 136 AQNAIG---TQVTPCLYQVVLAGKP-QPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLL--V 203 (261)
Q Consensus 136 ~~~~~~---~~~~~~~~~v~~~~~p-~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~--~ 203 (261)
+.+..+ ....... +.|...+ .+|. +.+.. ..|+.++|.|.+ .+..|. ..+.|+++....... .
T Consensus 89 ~~~~~~~~~~~~~~~~--l~V~~~~~~~P~-i~~~~~~~~~~~g~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~ 163 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTK--VTVLGQPNAAPS-VTLFPPSSEELKTNQATLVCMI--NGFYPADVAVTWEADGTPITQGVKT 163 (213)
T ss_dssp EEETTTTEEEEBCCEE--EEEECSCCBCCE-EEEECCCHHHHTTTEEEEEEEE--EEEBSSCCEEEEEETTEEECTTEEE
T ss_pred eccCCcceeEEcCceE--EEEeCCCCCCCe-EEccCCCcccccCCcEEEEEEe--eceeCCCeEEEEEcCCcccCCCccc
Confidence 999877 2233333 4443333 2332 22221 258999999997 343333 233344432221100 0
Q ss_pred --EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 204 --NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 204 --~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
..... ....+.|..+..+|.|.| +|.|.|..|..
T Consensus 164 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y--~C~a~n~~~~~ 203 (213)
T 3mj8_L 164 TQPSKSDSKYMATSYLTMTADAWKSRNTF--ICKVTHGGNTV 203 (213)
T ss_dssp CCCEEETTEEEEEEEEEEESHHHHSCSCE--EEEEEETTEEE
T ss_pred CCcCccCCcEEEEEEEEEeHHHcCCCCEE--EEEEEECCccE
Confidence 00000 013477888777789999 99999998643
No 250
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.64 E-value=2e-14 Score=111.24 Aligned_cols=160 Identities=15% Similarity=0.169 Sum_probs=110.0
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
+.+..|++++|.|.+.+.++...+.|++++... .....++...+ ..|.|.++...|+|.|+|.+ .|.... .
T Consensus 16 v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~~--~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~~---~g~~~~--~ 86 (325)
T 1n26_A 16 LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAA--GSHPSRWAGMG--RRLLLRSVQLHDSGNYSCYR---AGRPAG--T 86 (325)
T ss_dssp EEECTTCCEEEECTTSCTTCCSEEEEEEECSSS--SCCCEEEEEES--SEEEECSCCGGGCEEEEEES---SSSCSC--E
T ss_pred EECCCCCcEEEEeCCCCCCCCceEEEEECCccC--Ccccccccccc--ceEEecccchhhCeEeEEEe---CCEEee--e
Confidence 455799999999999876643489999877432 22222333222 47999999999999999993 454444 4
Q ss_pred EEEEeCCCCCCCCcceEE-eecCCeEEEEeecCCCCCCCeEEEEEEEeC-CccceeE---E--EecCCCCcEEEcCCCCC
Q psy11549 149 YQVVLAGKPQPPQNCSVR-NETTSSVHISCTPGYDGGLPQTFTLELYSA-SDLNLLV---N--LTNLDTPAFTLEDLGLD 221 (261)
Q Consensus 149 ~~v~~~~~p~~p~~~~v~-~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~-~~~~~~~---~--~~~~~~~~~~i~~~~l~ 221 (261)
..+.|..+|..|. +... ......+.+.|.++.+++.+..|.+.|+.. +.....+ . ........+.|.. +.
T Consensus 87 ~~L~V~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~--~~ 163 (325)
T 1n26_A 87 VHLLVDVPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAV--PE 163 (325)
T ss_dssp EEEEECCCCCCCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECC--CT
T ss_pred EEEEeccCCCCCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECC--Cc
Confidence 5566778898887 5554 233668999999877777777788887653 2211121 1 1122335677877 44
Q ss_pred -CccEEEEEEEEEcCCCcCC
Q psy11549 222 -GTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 222 -~~~~Y~~~~~a~N~~G~~~ 240 (261)
+...|.|+|.|.|.+|.+.
T Consensus 164 ~~~~~Y~f~v~A~N~~G~~~ 183 (325)
T 1n26_A 164 GDSSFYIVSMCVASSVGSKF 183 (325)
T ss_dssp TCCCEEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEEEEEcCCCCcc
Confidence 7789999999999999764
No 251
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.64 E-value=5.3e-15 Score=109.93 Aligned_cols=117 Identities=19% Similarity=0.248 Sum_probs=80.7
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece--------------eecCceeEEEeeCCCcEEEEEEEeeC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI--------------CKSDRIVIVGASRSESVDIHCAVEAD 86 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~--------------~~~~~~~~~~~~~g~~~~l~C~~~~~ 86 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|..++. +..+. . ..+..|++++|.|.+.+.
T Consensus 77 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~-~-~~v~~G~~v~L~C~~~~~ 154 (247)
T 1svz_A 77 TLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSG-P-ELKKPGETVKISCKATNY 154 (247)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECC-C-EEECTTCCEEEEEEEESS
T ss_pred EEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCC-c-eeecCCCcEEEEEEEcCc
Confidence 7999999999999999999887654333456788876431 12222 2 348899999999999987
Q ss_pred C-CCceeEEEEcCCccccc------c----------CCceEEe----CCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 87 P-PARSFKWKFNNSGETLD------V----------GSERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 87 ~-~~~~~~W~~~~~~~~~~------~----------~~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
+ +...+.|++...+.... . ...++.. ......|.|.++..+|+|.|+|.+.|.
T Consensus 155 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 155 AFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred ccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 5 22379999864221110 0 0123322 233568999999999999999999984
No 252
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.64 E-value=2.6e-15 Score=111.66 Aligned_cols=174 Identities=11% Similarity=0.058 Sum_probs=98.0
Q ss_pred EEeeCCCcEEEEEEEeeCCCCc----eeEEEEcCCcccccc--------------CCceEE---eCCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPPAR----SFKWKFNNSGETLDV--------------GSERFS---SGSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~----~~~W~~~~~~~~~~~--------------~~~~~~---~~~~~~~l~i~~~~~~ 127 (261)
+.+..|++++|.|.+.+.|++. .+.|++.+....... ...++. .......|.|.++..+
T Consensus 13 ~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~ 92 (248)
T 3pv7_A 13 QITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLE 92 (248)
T ss_dssp EEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGG
T ss_pred eEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHH
Confidence 5678999999999999887652 499998643211000 000000 1123446999999999
Q ss_pred cCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccc------
Q psy11549 128 DYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLN------ 200 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~------ 200 (261)
|+|.|+|.+.+..+..... +.+.|..+|............+..+.|.|.+ .+..|.. .+.|+++.....
T Consensus 93 D~G~Y~C~~~~~~~~~~~~--~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~--~g~~P~pi~v~W~k~g~~l~~~~~~~ 168 (248)
T 3pv7_A 93 EAGEYRCEVVVTPLKAQGT--VQLEVVASPASRLLLDQVGMKENEDKYMCES--SGFYPEAINITWEKQTQKFPHPIEIS 168 (248)
T ss_dssp GCEEEEEEEEETTEEEEEE--EEEEEEBCCEEEEECC--------CEEEEEE--EEEBSSCCEEEEEEECSSSCSCEEEC
T ss_pred HCeEEEEEEEeCCccceeE--EEEEEecCCceEEecCCccccCCCcEEEEEE--ccEECCCeEEEEEECCccCCCccccc
Confidence 9999999999987765553 4444444443111001111346778899997 4434533 344445443110
Q ss_pred --ee-EEEecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 201 --LL-VNLTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 201 --~~-~~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.. ........ ..+.|......++|.| +|.|.|..+....+..+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y--tC~a~n~~~~~~~~~~v~l~ 223 (248)
T 3pv7_A 169 EDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVY--QCVVRHASLHTPLRSNFTLT 223 (248)
T ss_dssp TTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEE--EEEEECTTCSSCEEEEECC-
T ss_pred cceeecccEECCCCCEEEEEEEEEcCccccCCCEE--EEEEECCCCCCCcEEEEEEE
Confidence 00 01111111 3456666667888999 99999999976665444443
No 253
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.64 E-value=7.4e-15 Score=109.74 Aligned_cols=162 Identities=11% Similarity=0.099 Sum_probs=99.0
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.+ +...+.|++...+.... ....++.. ......|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (256)
T 1nqb_A 10 ELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSE 89 (256)
T ss_dssp EEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChh
Confidence 5678999999999998875 22379999853221110 01123332 234568999999999
Q ss_pred cCeEEEEEEEcCCce---EEeeEEEEEEeCCCCC---CCCcceEEeecCCeEEEEeecCCCCCCCe----EEEEEEEe-C
Q psy11549 128 DYGTLSCAAQNAIGT---QVTPCLYQVVLAGKPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQ----TFTLELYS-A 196 (261)
Q Consensus 128 d~g~y~C~~~~~~~~---~~~~~~~~v~~~~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~----~~~~~~~~-~ 196 (261)
|+|.|+|.+.+..|. ......+.+.|..+|. .|.. +....|+.++|.|.+ .+..+. ..+.|++. .
T Consensus 90 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~--~~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~ 165 (256)
T 1nqb_A 90 DSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLS--LPVSLGDQASISCRS--SQSIVHSNGNTYLEWYLQKP 165 (256)
T ss_dssp GCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSE--EEECTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECT
T ss_pred hCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcE--EEEecCCcEEEEeEe--cCcccccccceEEEEEEECC
Confidence 999999999997552 1111123444544443 2333 334569999999997 333332 23445553 2
Q ss_pred Cccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 197 SDLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 197 ~~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
+.... .+.. .......|.|.+++.+|.|.| .|.|.|..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~~~~ 219 (256)
T 1nqb_A 166 GQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVY--YCFQGSHV 219 (256)
T ss_dssp TSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE--EEEECSSS
T ss_pred CCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEE--EEEEccCC
Confidence 22110 1111 112234689999999999999 88898843
No 254
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=1.9e-14 Score=107.65 Aligned_cols=163 Identities=14% Similarity=0.111 Sum_probs=97.4
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCcccccc---------------CCceEEe----CCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLDV---------------GSERFSS----GSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~~---------------~~~~~~~----~~~~~~l~i~~~~~~d 128 (261)
..+.+|+.++|.|.+.+.+ +...+.|++...+..... ...++.. ......|.|.++..+|
T Consensus 10 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (257)
T 1f3r_B 10 GLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD 89 (257)
T ss_dssp SEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTC
T ss_pred ccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCccc
Confidence 3477999999999999875 233899998632111100 1223332 2345689999999999
Q ss_pred CeEEEEEEEcCCc-------eEEeeEEEEEEeCCCCC------------CCC----cceEEeecCCeEEEEeecCCCCCC
Q psy11549 129 YGTLSCAAQNAIG-------TQVTPCLYQVVLAGKPQ------------PPQ----NCSVRNETTSSVHISCTPGYDGGL 185 (261)
Q Consensus 129 ~g~y~C~~~~~~~-------~~~~~~~~~v~~~~~p~------------~p~----~~~v~~~~~~~~~l~c~~~~~~~~ 185 (261)
+|.|+|.+.+..| .........+.|...|. ++. ...+....|+.++|.|.+ .+..
T Consensus 90 sG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~--~~~~ 167 (257)
T 1f3r_B 90 TGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKG--SQNI 167 (257)
T ss_dssp CEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEEC--SSCC
T ss_pred CEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEE--CCcC
Confidence 9999999999753 11111122344443321 111 112334569999999997 3333
Q ss_pred CeEEEEEEEeC-Cccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 186 PQTFTLELYSA-SDLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 186 p~~~~~~~~~~-~~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
+. ...|++.. +.... .+.. .......|+|.+++.+|.|.| .|.|.|..
T Consensus 168 ~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~n~~ 232 (257)
T 1f3r_B 168 NN-YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATY--FCYQYNNG 232 (257)
T ss_dssp BT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEE--EEEEESSS
T ss_pred CC-cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEE--EEEEeCCC
Confidence 33 44555532 22110 1111 111234789999999999999 99999964
No 255
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.63 E-value=2.7e-14 Score=105.43 Aligned_cols=159 Identities=11% Similarity=0.121 Sum_probs=93.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc--------------ccCCceEEe---CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL--------------DVGSERFSS---GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~--------------~~~~~~~~~---~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+.+|++++|.|. .+.+.+ .+.|++...+... .....++.. ......|.|.++..+|+|.
T Consensus 10 ~~v~~G~~v~L~C~-~~~~~~-~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~ 87 (238)
T 2p1y_A 10 KVAVTGGKVTLSCN-QTNNHN-NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSV 87 (238)
T ss_dssp EEEETTCCEEEEEE-ECSCCS-EEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEE
T ss_pred eEEeCCCEEEEEee-cCCCCc-cEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCee
Confidence 66889999999999 666666 8999985321110 001122222 2234579999999999999
Q ss_pred EEEEEEcCCceE-----EeeEEEEEEeCCC---C-------C---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEE
Q psy11549 132 LSCAAQNAIGTQ-----VTPCLYQVVLAGK---P-------Q---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLEL 193 (261)
Q Consensus 132 y~C~~~~~~~~~-----~~~~~~~v~~~~~---p-------~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~ 193 (261)
|+|.+.+..+.. .....+.+....+ | . .|.. +....|+.++|.|.+ . +.|...+.|+
T Consensus 88 Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~--~~v~~G~~v~L~C~~--~-~~p~~~i~W~ 162 (238)
T 2p1y_A 88 YFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQS--LTVWEGETAILNCSY--E-NSAFDYFPWY 162 (238)
T ss_dssp EEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSE--EEEETTSCEEEEEEC--C-CTTCCEEEEE
T ss_pred EEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCce--EEEeCCCeEEEEEEE--e-cCCCCcEEEE
Confidence 999999875421 1222333332111 0 1 1222 334569999999997 3 3333344455
Q ss_pred EeC-Cccce---------------eEEEe---cCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 194 YSA-SDLNL---------------LVNLT---NLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 194 ~~~-~~~~~---------------~~~~~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
+.. +.... .+... ......|.|.+++.+|+|.| +|.|.|..
T Consensus 163 k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~n~~ 222 (238)
T 2p1y_A 163 QQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATY--FCAAIDTN 222 (238)
T ss_dssp EECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEE--EEEEEETT
T ss_pred EECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEE--EEEEeeCC
Confidence 542 11110 11111 11235799999999999999 99999973
No 256
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=2.8e-14 Score=106.00 Aligned_cols=162 Identities=10% Similarity=0.084 Sum_probs=97.7
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~ 126 (261)
+.+.+|+.++|.|.+.+.| .+ .+.|++...+.... ....++.. ......|.|.++..
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSY-AMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 90 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEEecCCcEEEEEEeccccCCCc-eEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCH
Confidence 5678999999999999876 34 79999854221110 01123332 23456799999999
Q ss_pred CcCeEEEEEEEcCCceEEeeEEEEEEeCCCC------------CCCCc----ceEEeecCCeEEEEeecCCCCCCCeEEE
Q psy11549 127 LDYGTLSCAAQNAIGTQVTPCLYQVVLAGKP------------QPPQN----CSVRNETTSSVHISCTPGYDGGLPQTFT 190 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p------------~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~~~ 190 (261)
+|+|.|+|.+.+..+.........+.|..+| .++.. ..+....|+.++|.|.+ .+..+.. +
T Consensus 91 ~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~-v 167 (247)
T 2ghw_B 91 EDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRA--SQSVRSN-L 167 (247)
T ss_dssp GGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEE--SSCCTTC-E
T ss_pred HHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEe--CCCccce-E
Confidence 9999999999987332221112234444332 11111 12334579999999997 3333333 4
Q ss_pred EEEEe-CCccce---------------eEEEe-cCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 191 LELYS-ASDLNL---------------LVNLT-NLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 191 ~~~~~-~~~~~~---------------~~~~~-~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
.|++. .+.... .+... ......|+|.+++.+|.|.| .|.|.|..
T Consensus 168 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~~~~ 228 (247)
T 2ghw_B 168 AWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVY--YCQQRSNW 228 (247)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEE--EEEECSSS
T ss_pred EEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEE--EEEEccCC
Confidence 44442 222110 11111 11224589999999999999 88998853
No 257
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=7.9e-15 Score=108.47 Aligned_cols=117 Identities=18% Similarity=0.210 Sum_probs=82.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece------eecCceeEEEeeCCCcEEEEEEEeeCCC-CceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI------CKSDRIVIVGASRSESVDIHCAVEADPP-ARSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~------~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|..++. ....+.. ..+..|++++|.|.+.+.|. +..+.
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~~~v~ 154 (240)
T 1moe_A 76 TLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGA-ELVEPGASVKLSCTASGFNIKDTYMH 154 (240)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCC-EEECTTCCEEEEEEEESSCGGGSCEE
T ss_pred EEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCc-eEEeCCCcEEEEEEEcCccCCCCEEE
Confidence 7999999999999999999988665334557888876432 1111222 56889999999999998874 23799
Q ss_pred EEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 94 WKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 94 W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|+++..+.... ....++... .....|.|.++..+|+|.|+|.|..
T Consensus 155 W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 155 WVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 99863211110 011223221 3446799999999999999999984
No 258
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.63 E-value=6e-15 Score=104.15 Aligned_cols=158 Identities=11% Similarity=0.100 Sum_probs=99.7
Q ss_pred EEeeCCCcEEEEEEEee--CCCCceeEEEE--cCCccccc-------cCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 69 VGASRSESVDIHCAVEA--DPPARSFKWKF--NNSGETLD-------VGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~--~~~~~~~~W~~--~~~~~~~~-------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+....|++++|.|.... .+.+ .|.|++ ++...... ....++..... .+|.|.++..+|+|.|+|.+.
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~-~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~n-gsL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDID-DIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKN-GTLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEE-EEEEEEGGGCCEEEEECGGGCEEESCTTEEECTT-SCEEECSCCGGGCEEEEEEEE
T ss_pred EEEecCCCEEEeCCcccccCcCC-EEEEEECCCCcEEEEEeCccCCCCCCCeEEECCC-CCEEECCCChhhCEEEEEEEE
Confidence 66779999999995422 2234 899999 65321000 12233333322 279999999999999999999
Q ss_pred cCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcC
Q psy11549 138 NAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLED 217 (261)
Q Consensus 138 ~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 217 (261)
+..|.......+.+.|..++..|.. .. .+..+.|.|.+ .++.++.|.|+ ++.... . . ....+.+..
T Consensus 87 n~~g~~~~~~~~~L~V~~~~~~P~i-~~---~~~~v~L~C~~--~~~p~~~~~W~-~~g~~l----~-~--~~~~i~~~~ 152 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERVSKPKI-SW---TCINTTLTCEV--MNGTDPELNLY-QDGKHL----K-L--SQRVITHKW 152 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCCCCCEE-EE---ETTTTEEEEEC--SSCSSCEEEEE-ESSCEE----E-E--ESSCEEEEC
T ss_pred eCCCceeEEEEEEEEEcCcCCCCEE-EE---ccCcEEEEeEc--cCCCCCEEEEE-ECCEEC----C-C--CCcEEEEec
Confidence 9877665444566666655555532 22 24579999997 44445566654 332221 0 1 112333332
Q ss_pred CCCCCccEEEEEEEEEcCCCcCCceeee
Q psy11549 218 LGLDGTVLMRVVISGVNAKGRSLPVIWD 245 (261)
Q Consensus 218 ~~l~~~~~Y~~~~~a~N~~G~~~~s~~~ 245 (261)
...+.|.| +|.|.|++|....+..+
T Consensus 153 -~~~d~G~Y--~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 153 -TTSLSAKF--KCTAGNKVSKESSVEPV 177 (182)
T ss_dssp -CSCEEEEE--EEEEECSSCEEEEEEEE
T ss_pred -ccCCCcEE--EEEEEeCCCCcEEccee
Confidence 36889999 99999999977665554
No 259
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.63 E-value=8.3e-15 Score=111.08 Aligned_cols=118 Identities=19% Similarity=0.257 Sum_probs=82.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc----ceeeeEEEEEEeece---------------eecCceeEEEeeCCCcEEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE----ATSNQLKLRVKYAPI---------------CKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~----~~s~~~~l~V~~~p~---------------~~~~~~~~~~~~~g~~~~l~ 80 (261)
.+|.|.+++.+|+|.|+|.+.|..|. .....+.|.|...|. +...+. .+.+.+|++++|.
T Consensus 105 ~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~v~~G~~v~L~ 183 (282)
T 1qok_A 105 AYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPA-IMSASPGEKVTIT 183 (282)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECS-EEEECTTCCEEEE
T ss_pred EEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCC-EEEEcCCCcEEEE
Confidence 48999999999999999999998751 112345788876541 121222 2568899999999
Q ss_pred EEEeeCCCCceeEEEEc--CCccccc---------cCCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 81 CAVEADPPARSFKWKFN--NSGETLD---------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~--~~~~~~~---------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
|.+.+.+ + .+.|++. +...... ....++. .......|.|.++..+|+|.|+|.+.+..
T Consensus 184 C~~~~~~-~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 254 (282)
T 1qok_A 184 CSASSSV-S-YMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSY 254 (282)
T ss_dssp EEESSCC-S-CCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred EEecCCC-c-eEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCC
Confidence 9999888 6 8999993 3321100 0112332 23345579999999999999999998753
No 260
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.63 E-value=5.2e-15 Score=104.48 Aligned_cols=154 Identities=13% Similarity=0.136 Sum_probs=97.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc---------c-CC--ceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD---------V-GS--ERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~---------~-~~--~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+.+.+|++++|.|.+....+...+.|++.+...... . .. .++.......+|.|.++..+|+|.|+|.+
T Consensus 9 v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v 88 (180)
T 2dru_A 9 VNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRM 88 (180)
T ss_dssp EEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEEEE
T ss_pred EEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEEEE
Confidence 667899999999998543223389999842111110 0 11 34444334457999999999999999999
Q ss_pred EcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEc
Q psy11549 137 QNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLE 216 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 216 (261)
.+.. ... ..+.+.|..++..|.. .+ .+..++|.|.+ ..+.++.+.| ++...... ......+.+.
T Consensus 89 ~~~~-~~~--~~~~L~V~~~~~~P~i-~~---~~~~v~L~C~~--~~gp~p~i~W-~~~~~~l~------~~~~~~l~~~ 152 (180)
T 2dru_A 89 LHET-EDQ--WKITMEVYEMVSKPMI-YW---ECSNATLTCEV--LEGTDVELKL-YQGKEHLR------SLRQKTMSYQ 152 (180)
T ss_dssp ESSS-EEE--EEEEEEEECCCCCCEE-EE---EGGGTEEEEEC--SSCTTCEEEE-EETTEEEE------EESSSEEEEE
T ss_pred EcCC-eEE--EEEEEEEECCCCCCEE-Ee---cCCCEEEEEEe--CCCCCCEEEE-EECCeECc------CCCCCEEEEE
Confidence 8765 333 3556666566555542 22 24669999997 3443344544 44432221 1123455564
Q ss_pred CCCCCCccEEEEEEEEEcCCCcCCce
Q psy11549 217 DLGLDGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 217 ~~~l~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
. ..+.|.| +|.|.|.+|....+
T Consensus 153 ~--~~d~g~Y--~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 153 W--TNLRAPF--KCKAVNRVSQESEM 174 (180)
T ss_dssp C--SCCSSCE--EEEEEETTEEEEEE
T ss_pred E--hhcCccE--EEEEecCcCccccc
Confidence 4 6789999 99999999866443
No 261
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.63 E-value=4.5e-14 Score=105.04 Aligned_cols=157 Identities=17% Similarity=0.194 Sum_probs=95.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|+.++|.|.+.+.+.+ .+.|++...+.... ....++. .......|.|.++..+|+|.|+|.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~~-~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (250)
T 3esu_F 14 LSASLGDRVTISCRASQDIRN-YLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQ 92 (250)
T ss_dssp EEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEeeCCCcEEEEEEecccCCc-eEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEE
Confidence 667899999999999998888 89999854221110 0112222 233445799999999999999999
Q ss_pred EEcCCceEE-eeEEEEEEeCCCC--------------------C--CCCcceEEeecCCeEEEEeecCCCCCC-CeEEEE
Q psy11549 136 AQNAIGTQV-TPCLYQVVLAGKP--------------------Q--PPQNCSVRNETTSSVHISCTPGYDGGL-PQTFTL 191 (261)
Q Consensus 136 ~~~~~~~~~-~~~~~~v~~~~~p--------------------~--~p~~~~v~~~~~~~~~l~c~~~~~~~~-p~~~~~ 191 (261)
+.+..+... ....+.|. .+| . .|.. +....|+.++|.|.+ .+.. +...+.
T Consensus 93 ~~n~~~~~~~~~~~l~V~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~G~~v~L~C~~--~~~~~~~~~v~ 166 (250)
T 3esu_F 93 QGNTLPWTFGGGTKLEIR--RGGGGSGGGGSGGGGSGGGGSEVQLQQSGP--ELVKPGASVKISCKD--SGYAFSSSWMN 166 (250)
T ss_dssp ECSSSSCEECCCEEEEEC--------------------------CEECCC--EEECTTCCEEEEEEC--CSTTGGGSEEE
T ss_pred EeeCCCceECCCEEEEEE--CCCCcccccccccccccCcccceEEecCCc--eEEcCCceEEEEEEe--cCCcccCCEEE
Confidence 998755422 22233332 221 1 1222 334579999999997 2222 133445
Q ss_pred EEEeC-CccceeE-EEe----------------------cCCCCcEEEcCCCCCCccEEEEEEEEEc
Q psy11549 192 ELYSA-SDLNLLV-NLT----------------------NLDTPAFTLEDLGLDGTVLMRVVISGVN 234 (261)
Q Consensus 192 ~~~~~-~~~~~~~-~~~----------------------~~~~~~~~i~~~~l~~~~~Y~~~~~a~N 234 (261)
|++.. +...... ... ......|.|.+++.+|.|.| .|.|.|
T Consensus 167 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~~~~ 231 (250)
T 3esu_F 167 WVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVY--FCARSG 231 (250)
T ss_dssp EEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEE--EEEEEC
T ss_pred EEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEE--EEEEec
Confidence 55542 2111010 000 01223699999999999999 888987
No 262
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.63 E-value=5.4e-16 Score=114.47 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=79.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~ 95 (261)
.+|.|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...... .....|+.++|.|.+.+.++ ...+.|+
T Consensus 94 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v~W~ 172 (237)
T 3sob_L 94 FTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPS-DEQLKSGTASVVCLLNNFYPREAKVQWK 172 (237)
T ss_dssp EEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCC-HHHHHHTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCC-hhhccCCceEEEEEEcccCCCceEEEEE
Confidence 47999999999999999999887764434456677743 3333211111 11335889999999998544 3489999
Q ss_pred EcCCcccccc-CCceEEe-CC----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 96 FNNSGETLDV-GSERFSS-GS----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 96 ~~~~~~~~~~-~~~~~~~-~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
+++....... ....... .+ ..+.|.|.....+|.|.|+|.|.|....
T Consensus 173 k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 173 VDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp ETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 9874321100 0000011 11 1346888888889999999999997643
No 263
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.63 E-value=2.3e-15 Score=109.34 Aligned_cols=112 Identities=17% Similarity=0.266 Sum_probs=77.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEee-CCCCceeEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEA-DPPARSFKW 94 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~~W 94 (261)
+|.|.+++.+|+|.|+|.+.|..+. .....+.|.|.. +|.+...... ..+..|+.++|.|.+.+ .|.+ .+.|
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~l~C~~~g~~P~~-~v~W 149 (213)
T 3nl4_L 72 TLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPS-ADLVATGTVTIVCVANKYFPDV-TVTW 149 (213)
T ss_dssp EEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCC-HHHHTTSEEEEEEEEEEEBSCC-EEEE
T ss_pred EEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCc-hhhccCCcEeEEEEEecccCCc-EEEE
Confidence 8999999999999999999988764 334456677743 3333221111 22446999999999998 6655 8999
Q ss_pred EEcCCcccccc---------CCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 95 KFNNSGETLDV---------GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 95 ~~~~~~~~~~~---------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
++++....... ....+. ..+.|.|..+..+|.|.|+|.|.
T Consensus 150 ~k~g~~~~~~~~~~~~~~~~~~~~~~---~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 150 EVDGTTQTTGIENSKTPQNSADCTYN---LSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EETTEECCSSEEEEECCCCTTTCCEE---EEEEEEEEHHHHHTCCEEEEEEE
T ss_pred EeCCccCCCCeecccCcccCCCCeEE---EEEEEEecHHHcCCCCeEEEEEE
Confidence 99874221100 001111 12468899999999999999999
No 264
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.63 E-value=1.9e-14 Score=107.74 Aligned_cols=160 Identities=13% Similarity=0.188 Sum_probs=91.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc--c--C-------------CceEE---eCCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD--V--G-------------SERFS---SGSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~--~--~-------------~~~~~---~~~~~~~l~i~~~~~~d 128 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++...+.... . . ..++. .......|.|.++..+|
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 90 (259)
T 3omz_A 12 VIRQTGSSAEITCDLAEGSTG-YIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIEND 90 (259)
T ss_dssp EEEETTCCEEEECCC-----C-EEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGG
T ss_pred eEecCCCcEEEEEEEccCCCc-EEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCccc
Confidence 678899999999999988866 89999842211110 0 0 01111 12234579999999999
Q ss_pred CeEEEEEEEcCCc---eEEeeEEEEEEeCC-C--------------C---CCCCcceEEeecCCeEEEEeecCCCCCCCe
Q psy11549 129 YGTLSCAAQNAIG---TQVTPCLYQVVLAG-K--------------P---QPPQNCSVRNETTSSVHISCTPGYDGGLPQ 187 (261)
Q Consensus 129 ~g~y~C~~~~~~~---~~~~~~~~~v~~~~-~--------------p---~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~ 187 (261)
+|.|.|.+.+..+ .......+.|.... . | ..|.. +....|+.++|.|.. .+..|.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~--~~v~~G~~v~L~C~~--~~~~~~ 166 (259)
T 3omz_A 91 SGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSS--VSMPVRKAVTLNCLY--ETSWWS 166 (259)
T ss_dssp CEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCC--EEEETTCCEEECCEE--ECCCSS
T ss_pred CEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCE--EEEcCCCCEEEEEEC--CCccCC
Confidence 9999999998755 22233344444321 0 1 12222 333569999999986 333344
Q ss_pred EEEEEEEeCCccceeE----------------EE---ecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 188 TFTLELYSASDLNLLV----------------NL---TNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 188 ~~~~~~~~~~~~~~~~----------------~~---~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
....|++........+ .. .......|.|.+++.+|+|.| .|.+.+.
T Consensus 167 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~~~~~ 231 (259)
T 3omz_A 167 YYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKY--FCALGES 231 (259)
T ss_dssp CEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEE--EEEEESC
T ss_pred ceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEE--EEEEeCc
Confidence 4445555432211111 00 011235699999999999999 7777653
No 265
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.63 E-value=4.3e-15 Score=111.03 Aligned_cols=120 Identities=16% Similarity=0.232 Sum_probs=82.6
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcc---eeeeEEEEEEe--------------------eceeecCceeEEEeeCCCcE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEA---TSNQLKLRVKY--------------------APICKSDRIVIVGASRSESV 77 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~---~s~~~~l~V~~--------------------~p~~~~~~~~~~~~~~g~~~ 77 (261)
+|.|.+++.+|+|.|+|.+.|..+.. ....+.|.|.. +|.+...+.. ..+.+|+++
T Consensus 77 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v 155 (256)
T 3tf7_C 77 HLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRN-KVTVTGENV 155 (256)
T ss_dssp EEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSE-EEEETTCCE
T ss_pred EEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCE-EEEeCCCcE
Confidence 79999999999999999999876421 12345677764 3334433333 567799999
Q ss_pred EEEEEEeeCCCCceeEEEEcCCcccccc--------------CCceEEe---CCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 78 DIHCAVEADPPARSFKWKFNNSGETLDV--------------GSERFSS---GSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 78 ~l~C~~~~~~~~~~~~W~~~~~~~~~~~--------------~~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+|.|.+.+. .+ .+.|++...+..... ...++.. ......|.|.++..+|+|.|+|.|.|..
T Consensus 156 ~L~C~~~~~-~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 233 (256)
T 3tf7_C 156 TLSCRQTNS-HN-YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAP 233 (256)
T ss_dssp EECEEECSC-CS-EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEET
T ss_pred EEEEEcCCC-ce-EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCC
Confidence 999999876 44 899998442211100 0111111 2334579999999999999999999876
Q ss_pred ceE
Q psy11549 141 GTQ 143 (261)
Q Consensus 141 ~~~ 143 (261)
|..
T Consensus 234 g~~ 236 (256)
T 3tf7_C 234 GQL 236 (256)
T ss_dssp TEE
T ss_pred Ccc
Confidence 543
No 266
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.63 E-value=4.4e-15 Score=106.16 Aligned_cols=154 Identities=15% Similarity=0.176 Sum_probs=95.0
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc-ccC----------C----ceEEeCCceeEEEEecCCCCcCeEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL-DVG----------S----ERFSSGSRGSMLRYTPVTELDYGTLS 133 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~-~~~----------~----~~~~~~~~~~~l~i~~~~~~d~g~y~ 133 (261)
+.+..|++++|.|.+.+.++...+.|++++..... ... . .++.... ...|.|.++..+|+|.|+
T Consensus 8 v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~-~~sL~I~~v~~~D~G~Y~ 86 (193)
T 2if7_A 8 VNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQ-SYSLQLSNLKMEDTGSYR 86 (193)
T ss_dssp EEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECT-TCCEEECSCCGGGCEEEE
T ss_pred EEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECC-CeEEEECCCCcccCceEE
Confidence 67789999999999876444338999997532110 000 0 1223332 457999999999999999
Q ss_pred EEEEcCCceEEeeEEEEEEeCCCCCCCCcceEE---eecCC-eEEEEeecCCCCCCC-eEEEEEEEeCCccceeEEEecC
Q psy11549 134 CAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVR---NETTS-SVHISCTPGYDGGLP-QTFTLELYSASDLNLLVNLTNL 208 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~---~~~~~-~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~ 208 (261)
|.+.+..+.... .+.+.|..+|..|.. ... ...+. .++|.|.+ .+..| +.+.|. +..... .
T Consensus 87 C~~~~~~~~~~~--~~~L~V~~~~~~p~i-~~~~~~~~~g~~~v~L~C~~--~g~~p~p~i~W~-~~g~~l------~-- 152 (193)
T 2if7_A 87 AQISTKTSAKLS--SYTLRILRQLRNIQV-TNHSQLFQNMTCELHLTCSV--EDADDNVSFRWE-ALGNTL------S-- 152 (193)
T ss_dssp EEEECSSCEEEE--EEEEEEECCCEEEEE-EECCC---CSSEEEEEEEEE--ESCCTTCEEEEE-ETTEEE------E--
T ss_pred EEEEecCCCeEE--EEEEEEEccCCCCeE-ecCceeecCCCceEEEEEEE--ecCCCceEEEEE-eCCEEc------C--
Confidence 999998776554 445555444433321 111 12344 79999997 44343 445444 332111 1
Q ss_pred CCCcEEEcCCCCC-CccEEEEEEEEEcCCCcC
Q psy11549 209 DTPAFTLEDLGLD-GTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 209 ~~~~~~i~~~~l~-~~~~Y~~~~~a~N~~G~~ 239 (261)
....+.|...... +.|.| +|.|.|.+|..
T Consensus 153 ~~~~l~i~~~~~~~d~G~Y--~C~a~N~~g~~ 182 (193)
T 2if7_A 153 SQPNLTVSWDPRISSEQDY--TCIAENAVSNL 182 (193)
T ss_dssp SSSEEEEEECTTTCSCCEE--EEEEEETTEEE
T ss_pred CCCeEEEEeccCcCCCCcE--EEEEECCCCcc
Confidence 2245666432233 79999 99999999976
No 267
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.63 E-value=1.1e-15 Score=111.06 Aligned_cols=118 Identities=17% Similarity=0.201 Sum_probs=79.9
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEE---EeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRV---KYAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWKF 96 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V---~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~~ 96 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.| ..+|.+...... .....|+.++|.|.+.+.++ +..+.|++
T Consensus 72 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~~~~v~l~C~~~g~~p~~~~v~W~k 150 (213)
T 3r06_A 72 SFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPS-SEQLGTGSATLVCFVNNFYPKDINVKWKV 150 (213)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHTTTEEEEEEEEEEEBSSCEEEEEEE
T ss_pred EEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCC-ceecCCCCcEEEEEEeeecCCceEEEEEE
Confidence 89999999999999999998876554455567777 344544322211 22346888999999998654 45899999
Q ss_pred cCCccccccCC-ce--EEeCC-----ceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 97 NNSGETLDVGS-ER--FSSGS-----RGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 97 ~~~~~~~~~~~-~~--~~~~~-----~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
++.. +.... .. ..... ..+.|.|.....+|.|.|+|.|.|...
T Consensus 151 ~g~~--l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 151 DGSE--KRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp TTEE--ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred CCcc--cCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 8742 21110 00 11111 123577888888889999999999753
No 268
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.63 E-value=5.3e-16 Score=113.06 Aligned_cols=125 Identities=16% Similarity=0.219 Sum_probs=79.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC----cceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeC-CCCc
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG----EATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEAD-PPAR 90 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~----~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~ 90 (261)
.+|.|.+++.+|+|.|+|.+.+..+ ......+.|.|. .+|.+...... .....|+.++|.|.+.+. |.+.
T Consensus 75 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~-~~~~~~~~v~L~C~~~g~~p~~~ 153 (218)
T 3s96_B 75 RYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPS-SEELKENKATLVCLISNFSPSGV 153 (218)
T ss_dssp EEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCC
T ss_pred EEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCC-cccccCCcEEEEEEECcccCCCe
Confidence 3799999999999999999998876 122445678887 33443321111 123457899999999984 4444
Q ss_pred eeEEEEcCCccccccCCceEEe-CCc---eeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 91 SFKWKFNNSGETLDVGSERFSS-GSR---GSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~-~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.+.|++++.............. .+. .+.|.|.....+|.|.|+|.|.|..+....
T Consensus 154 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~ 212 (218)
T 3s96_B 154 TVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEK 212 (218)
T ss_dssp EEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEE
T ss_pred EEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccc
Confidence 8999997742211000000000 111 234778888788899999999998765544
No 269
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.62 E-value=1.8e-14 Score=91.38 Aligned_cols=92 Identities=13% Similarity=0.227 Sum_probs=69.7
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCce--EEeCCceeEEEEecCCCCcCeEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSER--FSSGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~--~~~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
.||.+...+.. +.+.+|+.+.|.|.+.+.|.| .+.|++++.... .....+ +...+....|.|.++..+|+|.|+|
T Consensus 4 ~PP~i~~~p~~-~~v~~G~~~~l~C~~~g~P~p-~v~W~k~g~~i~-~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 3knb_A 4 IPPKIEALPSD-ISIDEGKVLTVACAFTGEPTP-EVTWSCGGRKIH-SQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEEECCCCSE-EEEETTSEEEEEEEEEEESCC-EEEEEETTEECC-TTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCEEEeCCCc-EEEeCCCeEEEEEEEEEecCC-EEEEEECceEee-eeccceeeeecccceEEEEEcCCCccCCEEEEE
Confidence 35666655544 778999999999999999998 899999874322 122223 3345556789999999999999999
Q ss_pred EEEcCCceEEeeEEEEE
Q psy11549 135 AAQNAIGTQVTPCLYQV 151 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v 151 (261)
.|.|..|.......+.|
T Consensus 81 ~a~N~~G~~~~~~~l~V 97 (100)
T 3knb_A 81 SLGNEFGSDSATVNIHI 97 (100)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEECCCEEEEEEEEEE
Confidence 99999998777544444
No 270
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.62 E-value=5.7e-15 Score=110.56 Aligned_cols=118 Identities=15% Similarity=0.208 Sum_probs=82.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEEee-----------------ceeecCceeEEEeeCCCcEEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVKYA-----------------PICKSDRIVIVGASRSESVDIH 80 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~~~-----------------p~~~~~~~~~~~~~~g~~~~l~ 80 (261)
.+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|... |.+...+.. +.+.+|++++|.
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v~L~ 157 (259)
T 3omz_A 79 LRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSS-VSMPVRKAVTLN 157 (259)
T ss_dssp CEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCC-EEEETTCCEEEC
T ss_pred EEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCE-EEEcCCCCEEEE
Confidence 47999999999999999999987652 2244567777753 333333333 678899999999
Q ss_pred EEEeeCCCCceeEEEEcCCcccccc-----------CCceEEeC----CceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 81 CAVEADPPARSFKWKFNNSGETLDV-----------GSERFSSG----SRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 81 C~~~~~~~~~~~~W~~~~~~~~~~~-----------~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|.+.+..+...+.|++...+..... ...++... .....|.|.++..+|+|.|+|.+..
T Consensus 158 C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 158 CLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp CEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred EECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 9988753333899998543221110 01223222 2345699999999999999999975
No 271
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.62 E-value=1.2e-14 Score=105.26 Aligned_cols=164 Identities=15% Similarity=0.162 Sum_probs=99.5
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc-----------ccCCceEEe--CCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL-----------DVGSERFSS--GSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~-----------~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+..|+.++|.|.+.+.+.+ .+.|++...+... .....++.. ......|.|.++..+|+|.|+|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (210)
T 1lk3_L 10 LTVSPGEKLTISCKASESVTS-RMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQ 88 (210)
T ss_dssp EEECTTSCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEeeCCCccCC-CEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEE
Confidence 678899999999999988776 7999985432211 001123322 33455899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCCCCCCcceEE-----eecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee-E---EE
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKPQPPQNCSVR-----NETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL-V---NL 205 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~-----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~-~---~~ 205 (261)
+.+..+..... ...+.+...+.+|. +.+. ...|..++|.|.+ .+..|.. .+.|+++....... . ..
T Consensus 89 ~~~~~~~~~~~-~~~l~V~~~~~~P~-v~~~~~~~~~~~g~~v~l~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 164 (210)
T 1lk3_L 89 QSWNGPLTFGA-GTKLELKRADAAPT-VSIFPPSTEQLATGGASVVCLM--NNFYPRDISVKWKIDGTERRDGVLDSVTD 164 (210)
T ss_dssp ECSSSSCEECC-CEEEEECCCCBCCE-EEEECCCHHHHTTTEEEEEEEE--EEEBSSCCEEEEEETTEECCTTEEEEECC
T ss_pred EEcCCCceeCC-CEEEEEcCCCcCCe-EEEECCchhhccCCcEEEEEEE--EeEeCCceEEEEEeCCccCCCCceEccCC
Confidence 99876543221 12333433332332 1221 1248899999997 3334432 33444443221111 1 11
Q ss_pred ecCCCC------cEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 206 TNLDTP------AFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 206 ~~~~~~------~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
...... .|.|..+..+|+|.| +|.|.|.....
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y--~C~a~n~~~~~ 202 (210)
T 1lk3_L 165 QDSKDSTYSMSSTLSLTKADYESHNLY--TCEVVHKTSSS 202 (210)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEE--EEEEECTTCSS
T ss_pred ccCCCCCEEEEEEEEEChHHhccCCcE--EEEEEecCCCC
Confidence 111111 578888777899999 99999987644
No 272
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.62 E-value=7.8e-14 Score=106.51 Aligned_cols=215 Identities=15% Similarity=0.128 Sum_probs=120.3
Q ss_pred ECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeec------eeecCceeEEEeeCCCcEEEEEEEeeCCCCce
Q psy11549 18 SNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAP------ICKSDRIVIVGASRSESVDIHCAVEADPPARS 91 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p------~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 91 (261)
.+++|.|.+++..|+|.|+|.+ .+.. ...+.|.|..++ .+...... ..+ ...|.|.+...+...+
T Consensus 49 ~~~~L~i~~~~~~d~G~YtC~~---~~~~-~~~~~l~v~~~~~~~~~t~i~~~~~~----pp~-~~~lsC~~~~~~~~~~ 119 (306)
T 3d85_D 49 SGKTLTIQVKEFGDAGQYTCHK---GGEV-LSHSLLLLHKKEDGIWSTDILKDQKE----PKN-KTFLRCEAKNYSGRFT 119 (306)
T ss_dssp ESSEEEEEECSGGGCEEEEEEE---TTEE-EEEEEEEEEEEETTEECCCSSCCCC-------C-CCCCEEEBSSSSSEEE
T ss_pred CCCEEEEEecCcCCCceEEEee---CCcc-cceEEEEEEeccCCcceeeeecccCC----CCC-CCcceEEcCCcccCcE
Confidence 6789999999999999999999 2443 445566665432 11100000 011 3356677665542225
Q ss_pred eEEEEcCCcccccc--------CCc-eEEeCC---ceeEEEEec-----------C------CCCcCeEEEEEEEcCCce
Q psy11549 92 FKWKFNNSGETLDV--------GSE-RFSSGS---RGSMLRYTP-----------V------TELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 92 ~~W~~~~~~~~~~~--------~~~-~~~~~~---~~~~l~i~~-----------~------~~~d~g~y~C~~~~~~~~ 142 (261)
..|..+... .+.. ... ...... ......+.+ . .......++|.|.|..|.
T Consensus 120 C~W~pg~~~-~l~~~~~~~r~~~~~~~~~C~~~~~~~~~c~v~~~~~~~~~~c~~~~~cp~~~~~~~y~~~V~A~n~lg~ 198 (306)
T 3d85_D 120 CWWLTTIST-DLTFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKY 198 (306)
T ss_dssp EEEEESCCS-SEEEEEEEEECSSSCEEEEECCCEEEEEEEC--CEEEEEEEEEEETTCCTTSCCCSCEEEEEEEEETTEE
T ss_pred EEecCCCCC-ceeEEEEEEecCCCCcceECCCCCCCccceeecCccccceeeeeeccccccccccEEEEEEEEEEccCCc
Confidence 666654431 1100 000 000000 000111111 0 112346678999999887
Q ss_pred EEeeEEEEEEeCCCCCCCCcceEEeecC-CeEEEEeecCCCCC-----CCeEEEEEEEeCCccceeEEEecCCCCcEEEc
Q psy11549 143 QVTPCLYQVVLAGKPQPPQNCSVRNETT-SSVHISCTPGYDGG-----LPQTFTLELYSASDLNLLVNLTNLDTPAFTLE 216 (261)
Q Consensus 143 ~~~~~~~~v~~~~~p~~p~~~~v~~~~~-~~~~l~c~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 216 (261)
......+.+.....|.||.++.+..... ..+.|+|.++.... ....|.+.|+..+... .+.......+.+.|
T Consensus 199 ~s~~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~-~~~~~~~~~ts~~l- 276 (306)
T 3d85_D 199 EQYTSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKRE-KKDRVFTDKTSATV- 276 (306)
T ss_dssp EEEEEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC-------CEEEESSSEEEE-
T ss_pred cccceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCc-cEEEeeccccEEEE-
Confidence 6554444444457899999998886333 78999999865433 3357899888765432 12222223355655
Q ss_pred CCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 217 DLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 217 ~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.++..|+|+|+|.|..|.|.+|.+....
T Consensus 277 ----~~~~~Y~vqVRa~~~~~~G~WSeWS~~~ 304 (306)
T 3d85_D 277 ----ICRKNASISVRAQDRYYSSSWSEWASVP 304 (306)
T ss_dssp ----CCCSSCEEEEEEEESSSCCCCCCCEEEE
T ss_pred ----eCCCeEEEEEEeccCCCCCCCCCCCCCc
Confidence 3478999999999999999998887653
No 273
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.62 E-value=4e-15 Score=105.08 Aligned_cols=112 Identities=14% Similarity=0.177 Sum_probs=77.9
Q ss_pred ceEE-EECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCce
Q psy11549 13 ARII-LSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARS 91 (261)
Q Consensus 13 ~~~~-~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~ 91 (261)
|..+ ..+++|+|.+++.+|+|.|+|.+.+.. .....+.|.|..++. .+ . +.. .+..++|.|.+...|.| .
T Consensus 61 R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~~--~~~~~~~L~V~~~~~---~P-~-i~~-~~~~v~L~C~~~~gp~p-~ 131 (180)
T 2dru_A 61 RVDLDKTNGALRIYNVSKEDRGDYYMRMLHET--EDQWKITMEVYEMVS---KP-M-IYW-ECSNATLTCEVLEGTDV-E 131 (180)
T ss_dssp TEEECTTTCCEEECSCCGGGCEEEEEEEESSS--EEEEEEEEEEECCCC---CC-E-EEE-EGGGTEEEEECSSCTTC-E
T ss_pred eEEEeCCCccEEEcCCCHHHCeEEEEEEEcCC--eEEEEEEEEEECCCC---CC-E-EEe-cCCCEEEEEEeCCCCCC-E
Confidence 3444 456799999999999999999997765 336677888875421 11 1 222 45679999999444666 8
Q ss_pred eEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 92 FKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+.|++++.. +. ... ...|.+.. .+|+|.|+|.|.|..+....
T Consensus 132 i~W~~~~~~--l~------~~~--~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~ 173 (180)
T 2dru_A 132 LKLYQGKEH--LR------SLR--QKTMSYQW--TNLRAPFKCKAVNRVSQESE 173 (180)
T ss_dssp EEEEETTEE--EE------EES--SSEEEEEC--SCCSSCEEEEEEETTEEEEE
T ss_pred EEEEECCeE--Cc------CCC--CCEEEEEE--hhcCccEEEEEecCcCcccc
Confidence 999998742 21 111 12455533 78999999999999887665
No 274
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.62 E-value=1.4e-14 Score=108.73 Aligned_cols=118 Identities=15% Similarity=0.233 Sum_probs=81.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece------------------ee-cCceeEEEeeCCCcEEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI------------------CK-SDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~------------------~~-~~~~~~~~~~~g~~~~l~C 81 (261)
+|.|.+++.+|+|.|+|.+.+..+......+.|.|..+|. +. ..... ..+.+|++++|.|
T Consensus 82 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~G~~v~L~C 160 (264)
T 2gjj_A 82 TLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGP-EVVKTGASVKISC 160 (264)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCC-EEECTTCCEEEEE
T ss_pred EEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCC-EEEcCCCcEEEEE
Confidence 8999999999999999999887653323446788876531 11 11112 3588999999999
Q ss_pred EEeeCCC-CceeEEEEcCCccccc-c-----C----------CceEEe----CCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 82 AVEADPP-ARSFKWKFNNSGETLD-V-----G----------SERFSS----GSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 82 ~~~~~~~-~~~~~W~~~~~~~~~~-~-----~----------~~~~~~----~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
.+.+.+. ...+.|++...+.... + . ..++.. ......|.|.++..+|+|.|+|.+.|.
T Consensus 161 ~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 161 KASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 9998764 2389999864221110 0 0 112221 234568999999999999999999985
No 275
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.61 E-value=1.2e-14 Score=110.66 Aligned_cols=120 Identities=15% Similarity=0.242 Sum_probs=82.4
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCC-Cc---ceeeeEEEEEEe----------------eceeecCceeEEEeeCCCcEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTK-GE---ATSNQLKLRVKY----------------APICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~-~~---~~s~~~~l~V~~----------------~p~~~~~~~~~~~~~~g~~~~l 79 (261)
.+|.|.+++.+|+|.|+|.+.+.. |. .....+.|.|.. ++.+...+.. +.+.+|++++|
T Consensus 101 ~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~-~~v~~G~~v~L 179 (291)
T 2gki_A 101 AYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSS-LAVSAGEKVTM 179 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSE-EEEETTSCEEE
T ss_pred EEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCE-EEEcCCCcEEE
Confidence 489999999999999999998874 21 112235777765 1223322323 67889999999
Q ss_pred EEEEeeCCCC-----ceeEEEEcCCccccc--c---------CCceEE--eCCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 80 HCAVEADPPA-----RSFKWKFNNSGETLD--V---------GSERFS--SGSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 80 ~C~~~~~~~~-----~~~~W~~~~~~~~~~--~---------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
.|.+.+.+.+ ..+.|++...+.... . ...++. .......|.|.++..+|+|.|+|.+.+..
T Consensus 180 ~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 258 (291)
T 2gki_A 180 SCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYH 258 (291)
T ss_dssp EEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 9999887654 279999864221110 0 022332 23344579999999999999999999853
No 276
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.61 E-value=2.6e-15 Score=109.69 Aligned_cols=176 Identities=13% Similarity=0.075 Sum_probs=107.1
Q ss_pred EEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCcccc----------ccCCceEEeCC-----ceeEEEEecCCCCcC
Q psy11549 69 VGASRSESVDIHCAVEADPP----ARSFKWKFNNSGETL----------DVGSERFSSGS-----RGSMLRYTPVTELDY 129 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~----------~~~~~~~~~~~-----~~~~l~i~~~~~~d~ 129 (261)
+.+..|++++|.|.+.+.+. ...+.|++++..... .....++.... ....|.|.++..+|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~ 84 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDE 84 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGC
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccC
Confidence 45679999999999987653 248999997643211 01112222211 245799999999999
Q ss_pred eEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc-cee--E
Q psy11549 130 GTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL-NLL--V 203 (261)
Q Consensus 130 g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~-~~~--~ 203 (261)
|.|+|.+.+.. .... .+.+.+..++..|... ......|+.+.|.|.+ ..+.|.....|++..+.. ... .
T Consensus 85 G~Y~C~~~~~~-~~~~--~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~--~~g~P~~~v~W~~~~~~~~~~~~~~ 159 (222)
T 4i0k_A 85 GSYTCFVSIQD-FDSA--AVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSS--YQGYPEAEVFWKDGQGVPLTGNVTT 159 (222)
T ss_dssp SCEEEEEEECC-CCCC--CCCCCCCBCCCCCEEECCC-----CCSEEEEEEEE--EEEBSCCEEEEECTTSCBCCSEEEE
T ss_pred EEEEEEEEeCC-CceE--EEEEEEEcCCCCCcEEeCCCceecCCceEEEEEec--ccccCCCeEEEEcCCCccCCCCcce
Confidence 99999999853 2222 3345554444433211 1112358999999996 344454434445422222 111 1
Q ss_pred EEecCCCCc---EEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeecc
Q psy11549 204 NLTNLDTPA---FTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 204 ~~~~~~~~~---~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~ 251 (261)
......... +.|.+++.+|.|.| +|.|.|..|....+..+.+..++
T Consensus 160 ~~~~~~~~~~~~l~i~~v~~~d~G~Y--~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 160 SQMANERGLFDVHSVLRVVLGANGTY--SCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEEECTTSCEEEEEEEEEECCTTCEE--EEEEEETTTTEEEEEEEECCC--
T ss_pred eEEcCCCCeEEEEEEEEEEeCCCCEE--EEEEECCCCCCceEEEEEEeCCc
Confidence 222222232 67888889999999 99999999988888777776443
No 277
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.61 E-value=6.3e-14 Score=104.68 Aligned_cols=162 Identities=15% Similarity=0.168 Sum_probs=94.7
Q ss_pred EEeeCCCcEEEEEEEeeC--CCCceeEEEEcCCcccccc-----------CCceEE--eCCceeEEEEecCCCCcCeEEE
Q psy11549 69 VGASRSESVDIHCAVEAD--PPARSFKWKFNNSGETLDV-----------GSERFS--SGSRGSMLRYTPVTELDYGTLS 133 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~--~~~~~~~W~~~~~~~~~~~-----------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~ 133 (261)
+.+.+|++++|.|.+.+. +.+ .+.|++...+..... ...++. .......|.|.++..+|+|.|+
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 90 (256)
T 3ux9_B 12 VSGAPGQRVTISCSGSSSNIGSN-YVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYY 90 (256)
T ss_dssp EEECTTCCEEEEEECCTTTTTTS-CCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCCCc-eEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEE
Confidence 678899999999999876 445 799998542211110 112222 2334557999999999999999
Q ss_pred EEEEcCCceE-EeeEEEEEEeCCCCCC-----------------CCcc----eEEeecCCeEEEEeecCCCCCCC-eEEE
Q psy11549 134 CAAQNAIGTQ-VTPCLYQVVLAGKPQP-----------------PQNC----SVRNETTSSVHISCTPGYDGGLP-QTFT 190 (261)
Q Consensus 134 C~~~~~~~~~-~~~~~~~v~~~~~p~~-----------------p~~~----~v~~~~~~~~~l~c~~~~~~~~p-~~~~ 190 (261)
|.+.+..+.. .......+.|..+|.. +..+ ......|+.++|.|.+ .+..+ ....
T Consensus 91 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~~v 168 (256)
T 3ux9_B 91 CQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAA--SGFTFSSYAM 168 (256)
T ss_dssp EEEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEE--ESSCGGGSEE
T ss_pred EEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEE--eCCcccccEE
Confidence 9999864321 1111233444333310 0001 1223569999999997 33221 2344
Q ss_pred EEEEeCCcccee---------------------EEEec---CCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 191 LELYSASDLNLL---------------------VNLTN---LDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 191 ~~~~~~~~~~~~---------------------~~~~~---~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
.|++........ +.... .....|+|.+++.+|+|.| +|.|.|.
T Consensus 169 ~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~~~~~ 235 (256)
T 3ux9_B 169 SWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVY--YCARYID 235 (256)
T ss_dssp EEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE--EEEEEET
T ss_pred EEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEE--EEEEEcC
Confidence 445542221111 11110 1223499999999999999 8889885
No 278
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.60 E-value=6.5e-15 Score=103.12 Aligned_cols=152 Identities=13% Similarity=0.102 Sum_probs=96.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc----------CCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV----------GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~----------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
+.+..|++++|.|.+.. |.+ .+.|++++.. .... ...++.......+|.|.++..+|+|.|.|.+.+
T Consensus 5 v~~~~G~~VtL~c~~~~-~~~-~i~W~~~~~~-i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSNV-PLK-EVLWKKQKDK-VAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEETTCCEEECCCCSS-CCS-CEEEEETTEE-EEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred EEEEcCCCEEEcCCCCC-Ccc-eEEEEeCCcE-EEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeC
Confidence 56779999999998843 545 8999987642 1110 111333333345799999999999999999998
Q ss_pred CCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCC
Q psy11549 139 AIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDL 218 (261)
Q Consensus 139 ~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 218 (261)
..+ . ..+.+.|..++..|.. ... .....|.|.+ .++.++.+.|+ ++..... ......+.+.+
T Consensus 82 ~~~--~--~~~~L~V~~~~~~p~i-~~~---~~~~~L~C~~--~~~p~p~i~W~-~~~~~l~------~~~~~~l~~~~- 143 (171)
T 1ccz_A 82 ITD--T--MKFFLYVLEMVSKPMI-YWE---CSNATLTCEV--LEGTDVELKLY-QGKEHLR------SLRQKTMSYQW- 143 (171)
T ss_dssp CCS--C--EEEEEEEECCCCCCEE-EEE---TTTTEEEEEC--SSCSSCEEEEE-ETTEEEE------EESSSEEEEEC-
T ss_pred CCC--c--EEEEEEEECcCCCCEE-EEe---cCCcEEEEEe--CCCCCcEEEEE-ECCEECc------CCcceEEEEec-
Confidence 776 2 3555666555555532 222 1224899997 44444556554 3322211 11224455555
Q ss_pred CCCCccEEEEEEEEEcCCCcCCceee
Q psy11549 219 GLDGTVLMRVVISGVNAKGRSLPVIW 244 (261)
Q Consensus 219 ~l~~~~~Y~~~~~a~N~~G~~~~s~~ 244 (261)
..+.|.| +|.|.|.+|....+..
T Consensus 144 -~~~~g~Y--~C~a~N~~~~~~~~~~ 166 (171)
T 1ccz_A 144 -TNLRAPF--KCKAVNRVSQESEMEV 166 (171)
T ss_dssp -SCCSSCE--EEEEEETTEEEEEEEC
T ss_pred -cCCCceE--EEEEEcccCcccceeE
Confidence 7788899 9999999997655443
No 279
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.60 E-value=8.2e-14 Score=114.29 Aligned_cols=165 Identities=10% Similarity=0.069 Sum_probs=91.8
Q ss_pred eeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccccCCceEEeC-C----ceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 71 ASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLDVGSERFSSG-S----RGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~-~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
+..|+.++|.|.+.+..+ ...+.|++++............... + ..+.|.|.....+|.|.|+|.|.|..+...
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~ 388 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ 388 (512)
T ss_pred hccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC
Confidence 457999999999998644 4589999987531100000111111 1 124688988888999999999999866443
Q ss_pred eeEEEEEEeCCC--CCCCCcceEE--eecCCeEE-EEeecCCCCCCCeE-EEEEEEeCCcccee-E---EE-ecCCC---
Q psy11549 145 TPCLYQVVLAGK--PQPPQNCSVR--NETTSSVH-ISCTPGYDGGLPQT-FTLELYSASDLNLL-V---NL-TNLDT--- 210 (261)
Q Consensus 145 ~~~~~~v~~~~~--p~~p~~~~v~--~~~~~~~~-l~c~~~~~~~~p~~-~~~~~~~~~~~~~~-~---~~-~~~~~--- 210 (261)
...+... ... +.+|.. .+. ...+..+. |.|.+ .+..|.. .+.|+++....... . .. .....
T Consensus 389 -~~~~~~~-~~~~~~~~p~v-~~~~~~~~~~~~~~L~C~~--~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~ 463 (512)
T 1zvo_C 389 -RLMALRE-PAAQAPVKLSL-NLLASSDPPEAASWLLCEV--SGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTF 463 (512)
T ss_pred -ceeEEee-cCCCCCCCCEE-EEEccCcCCCCceEEEEEE--eeeCCCCcEEEEEECCeECcCccccccceeECCCCCEE
Confidence 2222221 111 222221 111 11477888 99998 5545543 34455543322111 1 11 11122
Q ss_pred ---CcEEEcCCCCCCccEEEEEEEEEcCCCcCCce
Q psy11549 211 ---PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 211 ---~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
..+.|......+++.| +|.|.|........
T Consensus 464 ~~~s~L~v~~~~~~~~g~Y--tC~v~h~~l~~~~~ 496 (512)
T 1zvo_C 464 WAWSVLRVPAPPSPQPATY--TCVVSHEDSRTLLN 496 (512)
T ss_pred EEEEEEEECchhcCCCCeE--EEEEEecCCCCceE
Confidence 2344555334468899 99999998754433
No 280
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.60 E-value=1.1e-13 Score=103.49 Aligned_cols=159 Identities=13% Similarity=0.189 Sum_probs=92.8
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc-c--------------CCceEEe----CCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD-V--------------GSERFSS----GSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~-~--------------~~~~~~~----~~~~~~l~i~~~~~~d 128 (261)
+.+.+|++++|.|.+.+.+ +...+.|++...+.... + ...++.. ......|.|.++..+|
T Consensus 18 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 97 (257)
T 3gkz_A 18 SLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED 97 (257)
T ss_dssp SEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred eEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence 3477999999999999854 23389999843211110 0 1122222 1234579999999999
Q ss_pred CeEEEEEEEcCC----ceEEeeEEEEEEeCCC--------------CC---CCCcceEEeecCCeEEEEeecCCCCCCCe
Q psy11549 129 YGTLSCAAQNAI----GTQVTPCLYQVVLAGK--------------PQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQ 187 (261)
Q Consensus 129 ~g~y~C~~~~~~----~~~~~~~~~~v~~~~~--------------p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~ 187 (261)
+|.|+|.+.+.. ........+ .|..+ |. .|. .+....|+.++|.|.+ .+..+.
T Consensus 98 sG~Y~C~~~n~~~~~~~~~~~~~~l--~V~~~~~~~~~~~~~~~~~~~~~~~p~--~~~v~~G~~v~L~C~~--~~~~~~ 171 (257)
T 3gkz_A 98 TATYYCSYFDSDDYAMEYWGQGTSV--TVSGGGGSGGGGSGGGGSQIVLTQSPA--IMSASPGEKVTLTCSA--SSSVSS 171 (257)
T ss_dssp CEEEEEEEECTTCTTCEEECCCEEE--EEC---------CTTCCCCCCEECSCS--EEEECTTCCEEEEEEE--SSCCCG
T ss_pred CEEEEEEEecCCCcceeEEcCCEEE--eecCchhhcccccCCCccceEEEcCCc--eEEEeCCCcEEEEEEE--ccCccc
Confidence 999999999862 112222233 33332 11 122 2444679999999997 333333
Q ss_pred EEEEEEEe-CCcccee---------------EE-EecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 188 TFTLELYS-ASDLNLL---------------VN-LTNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 188 ~~~~~~~~-~~~~~~~---------------~~-~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
....|++. .+..... +. ........|.|.+++.+|.|.| .|.|.|.
T Consensus 172 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~~~~~ 234 (257)
T 3gkz_A 172 SHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASY--FCHQWSS 234 (257)
T ss_dssp GGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE--EEEECSS
T ss_pred eEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEE--EEEEccC
Confidence 13344443 2222111 10 0111223599999999999999 8888764
No 281
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.60 E-value=6.7e-14 Score=103.96 Aligned_cols=161 Identities=14% Similarity=0.161 Sum_probs=95.9
Q ss_pred EEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCccccc--c---------CCceEEe--CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPP----ARSFKWKFNNSGETLD--V---------GSERFSS--GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~~--~---------~~~~~~~--~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+.+|++++|.|.+.+.+. ...+.|++...+.... . ...++.. ......|.|.++..+|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 90 (247)
T 1svz_A 11 LPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGI 90 (247)
T ss_dssp EEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEE
Confidence 66889999999999988772 3389999854322110 0 0123322 3345579999999999999
Q ss_pred EEEEEEcCCceE-EeeEEEEEEeCCCCC----------CCCc----ceEEeecCCeEEEEeecCCCCCC-CeEEEEEEEe
Q psy11549 132 LSCAAQNAIGTQ-VTPCLYQVVLAGKPQ----------PPQN----CSVRNETTSSVHISCTPGYDGGL-PQTFTLELYS 195 (261)
Q Consensus 132 y~C~~~~~~~~~-~~~~~~~v~~~~~p~----------~p~~----~~v~~~~~~~~~l~c~~~~~~~~-p~~~~~~~~~ 195 (261)
|.|.+.+..+.. .....+.| ..++. ++.. .......|+.++|.|.. .+.. +.....|++.
T Consensus 91 Y~C~~~n~~~~~~~~~~~l~V--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 91 YYCFQGSHFPPTFGGGTKLEI--KGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKA--TNYAFTDYSMHWVKQ 166 (247)
T ss_dssp EEEEECSSSSCEECCCEEEEE--C---------------CCEEEECCCEEECTTCCEEEEEEE--ESSCGGGSCEEEEEE
T ss_pred EEEEEccCCccEECCCEEEEE--ECCccccccccccccCceEEeCCCceeecCCCcEEEEEEE--cCcccCCcEEEEEEe
Confidence 999999875432 12223333 33221 1110 01224679999999997 3332 2233445554
Q ss_pred C-Cccc--------------------eeEEEe---cCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 196 A-SDLN--------------------LLVNLT---NLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 196 ~-~~~~--------------------~~~~~~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
. +... ..+... ......|.|.+++.+|.|.| .|.|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~n~ 228 (247)
T 1svz_A 167 APGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATY--FCVRDRH 228 (247)
T ss_dssp CTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEE--EEEEEEG
T ss_pred CCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEE--EEEEecc
Confidence 2 1111 011111 11234799999999999999 8889885
No 282
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.60 E-value=7.1e-15 Score=102.92 Aligned_cols=107 Identities=13% Similarity=0.113 Sum_probs=74.8
Q ss_pred ECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEc
Q psy11549 18 SNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFN 97 (261)
Q Consensus 18 ~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~ 97 (261)
.+++|.|.+++.+|+|.|+|.+.|..+ +..+.|.|..++.. + . +.... ....|.|.+.+.|.| ++.|+++
T Consensus 58 ~~~sL~I~~v~~~DsG~Y~C~~~n~~~---~~~~~L~V~~~~~~---p-~-i~~~~-~~~~L~C~~~~~p~p-~i~W~~~ 127 (171)
T 1ccz_A 58 VSGSLTIYNLTSSDEDEYEMESPNITD---TMKFFLYVLEMVSK---P-M-IYWEC-SNATLTCEVLEGTDV-ELKLYQG 127 (171)
T ss_dssp TTCCEEECSCCGGGCEEEEEECTTCCS---CEEEEEEEECCCCC---C-E-EEEET-TTTEEEEECSSCSSC-EEEEEET
T ss_pred CCCeEEECCCChhhCceEEEEEeCCCC---cEEEEEEEECcCCC---C-E-EEEec-CCcEEEEEeCCCCCc-EEEEEEC
Confidence 568999999999999999999988776 45678888754321 1 1 11212 224899999988877 8999997
Q ss_pred CCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee
Q psy11549 98 NSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 146 (261)
+.. +... . ...+.+.. .+|.|.|+|.|.|..+.....
T Consensus 128 ~~~--l~~~------~--~~~l~~~~--~~~~g~Y~C~a~N~~~~~~~~ 164 (171)
T 1ccz_A 128 KEH--LRSL------R--QKTMSYQW--TNLRAPFKCKAVNRVSQESEM 164 (171)
T ss_dssp TEE--EEEE------S--SSEEEEEC--SCCSSCEEEEEEETTEEEEEE
T ss_pred CEE--CcCC------c--ceEEEEec--cCCCceEEEEEEcccCcccce
Confidence 742 2111 1 11233433 778999999999998886653
No 283
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.60 E-value=4.8e-15 Score=108.10 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=79.5
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc---ceeeeEEEEEEee----ceeecCceeEEEeeCCCcEEEEEEEee-CCCCce
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE---ATSNQLKLRVKYA----PICKSDRIVIVGASRSESVDIHCAVEA-DPPARS 91 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~---~~s~~~~l~V~~~----p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~ 91 (261)
.+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|... |.+...... ..+..|+.+.|.|.+.+ .|.|..
T Consensus 79 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~ 157 (219)
T 1c1e_H 79 AYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVT 157 (219)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCC-SSSCCSSEEEEEEEEEEEBSSCCE
T ss_pred EEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCc-cccccCCeEEEEEEcccccCCCeE
Confidence 48999999999999999999987642 1223567777653 333221111 23468999999999998 666658
Q ss_pred eEEEEcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 92 FKWKFNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+.|++++....... .......+ ..+.|.|..... |.|.|+|.|.|..+....
T Consensus 158 v~W~~~g~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~ 212 (219)
T 1c1e_H 158 VTWNSGSLSSGVHT-FPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKV 212 (219)
T ss_dssp EEEGGGTBCTTEEE-CCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEE
T ss_pred EEEEeCCcccceEe-cCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccE
Confidence 99998874311110 11111111 123578854444 569999999998775443
No 284
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.60 E-value=1.8e-15 Score=112.88 Aligned_cols=119 Identities=20% Similarity=0.211 Sum_probs=79.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWKF 96 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~~ 96 (261)
+|.|.+++.+|+|.|+|.+.+..+......+.|.|.. +|.+...... ..+..|+.++|.|.+.+.++ +.++.|++
T Consensus 110 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~k 188 (252)
T 3bkj_L 110 TLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKI 188 (252)
T ss_dssp EEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCC-HHHHHHTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCC-hhhcCCCcEEEEEEEeeEeCCCcEEEEEE
Confidence 8999999999999999999887654333345677753 3433321111 11236889999999998544 34799999
Q ss_pred cCCccccccC-C--ceEEe-CC----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 97 NNSGETLDVG-S--ERFSS-GS----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 97 ~~~~~~~~~~-~--~~~~~-~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
++.. +... . ..... .+ ..+.|.|.++..+|.|.|+|.|.|....
T Consensus 189 ~g~~--~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 189 DGSE--RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp TTEE--ECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred CCee--cCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 8742 2111 0 00111 11 1246899999999999999999997543
No 285
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=5e-14 Score=91.76 Aligned_cols=99 Identities=17% Similarity=0.268 Sum_probs=71.4
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+|.+...... +.+..|+.+.|.|.+.+.|.+ .+.|++++.... ......+........|.|.++..+|+|.|+|.|.
T Consensus 7 pp~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~i~W~k~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 7 GPQIIQFPED-QKVRAGESVELFGKVTGTQPI-TCTWMKFRKQIQ-ESEHMKVENSENGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCEESCCCCS-EEEETTCCEEEEEEEESSSSC-EEEEEESSSBCC-CSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEE
T ss_pred CCEEEeCCCC-eEEeCCCeEEEEEEEEcCCCC-EEEEEECCEECc-CCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEE
Confidence 4555544444 678899999999999998888 899999874321 1122223334446689999999999999999999
Q ss_pred cCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 138 NAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 138 ~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
|..|..... +.+.+..+|.+|.
T Consensus 84 N~~g~~~~~--~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 84 NKLGSRQAQ--VNLTVVDKPDPPA 105 (114)
T ss_dssp CSSCEEECC--EEEEEECSCSCCC
T ss_pred ECCCcEEEE--EEEEEECCCCCCC
Confidence 999977774 4444545665554
No 286
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.60 E-value=4.3e-15 Score=108.60 Aligned_cols=123 Identities=13% Similarity=0.140 Sum_probs=81.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc----ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCc
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE----ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPAR 90 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~----~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~ 90 (261)
.+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.|.
T Consensus 81 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~ 159 (222)
T 1q9r_B 81 LYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPV 159 (222)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCC-SCCCCSSEEEEEEEEEEEBSSCC
T ss_pred EEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcccc-ccccCCCcEEEEEEEccEECCCC
Confidence 38999999999999999999887541 112345777764 2333221111 124579999999999986 6555
Q ss_pred eeEEEEcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 91 SFKWKFNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.+.|++++...... ........+ ..+.|.|..+..+| |.|+|.|.|..+....
T Consensus 160 ~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 160 TVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp EEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred EEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 89999876421110 000000111 12368899998889 9999999998876544
No 287
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.59 E-value=7.3e-14 Score=104.34 Aligned_cols=160 Identities=15% Similarity=0.125 Sum_probs=95.3
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCccccc-c---------------CCceEEe----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETLD-V---------------GSERFSS----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~-~---------------~~~~~~~----~~~~~~l~i~~~~~ 126 (261)
+.+.+|++++|.|.+.+.+ .+ .+.|++...+.... + ...++.. ......|.|.++..
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 12 ELVKPGASVKISCKTSGYTFTEY-TMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred eEEcCCCCEEEEEEEeccccccc-EEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 4578999999999998765 34 79999743221110 0 0122222 12345699999999
Q ss_pred CcCeEEEEEEEcC----CceEEeeEEEEEEeC--------------CCCC---CCCcceEEeecCCeEEEEeecCCCCCC
Q psy11549 127 LDYGTLSCAAQNA----IGTQVTPCLYQVVLA--------------GKPQ---PPQNCSVRNETTSSVHISCTPGYDGGL 185 (261)
Q Consensus 127 ~d~g~y~C~~~~~----~~~~~~~~~~~v~~~--------------~~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~ 185 (261)
+|+|.|.|.+.+. .+.......+.|... .+|. .|. .+....|+.++|.|.+ .+..
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~v~~G~~v~L~C~~--~~~~ 166 (256)
T 3umt_A 91 EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPS--SLSASLGERVSITCRA--SQDI 166 (256)
T ss_dssp GGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECS--EEEECTTCCEEEEEEE--SSCC
T ss_pred ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCC--eEEEECCCCEEEEEEE--ecCC
Confidence 9999999999987 222223223333321 0111 122 2344679999999997 3332
Q ss_pred CeEEEEEEEeCC-ccce---------------eEE-EecCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 186 PQTFTLELYSAS-DLNL---------------LVN-LTNLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 186 p~~~~~~~~~~~-~~~~---------------~~~-~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
+. .+.|++... .... .+. ........|+|.+++.+|.|.| .|.|.|..
T Consensus 167 ~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~~~~~~ 231 (256)
T 3umt_A 167 GS-NLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDY--YCLQYASS 231 (256)
T ss_dssp TT-CEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEE--EEEECSSS
T ss_pred Cc-EEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEE--EEEEeeCC
Confidence 33 445555422 1111 110 0111223599999999999999 88998854
No 288
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.59 E-value=2.4e-14 Score=104.12 Aligned_cols=164 Identities=12% Similarity=0.082 Sum_probs=97.4
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc-----------cCCceEEe--CCceeEEEEecCCCCcCeEEEE
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD-----------VGSERFSS--GSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~-----------~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C 134 (261)
+.+..|++++|.|.+.+.+ +...+.|++.+.+.... ....++.. ......|.|.++..+|+|.|+|
T Consensus 10 ~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (216)
T 2xzc_L 10 VSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC 89 (216)
T ss_dssp EEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEE
Confidence 6788999999999964443 22389999865322110 01123322 3445589999999999999999
Q ss_pred EEEcCCc--eEEeeEEEEEEeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee-E--
Q psy11549 135 AAQNAIG--TQVTPCLYQVVLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL-V-- 203 (261)
Q Consensus 135 ~~~~~~~--~~~~~~~~~v~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~-~-- 203 (261)
.+.+..+ ....... +.+...+.+|.. .+.. ..|..++|.|.+ .+..|.. .+.|+++....... .
T Consensus 90 ~~~~~~~~~~~~~~~~--l~V~~~~~~P~v-~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~k~g~~~~~~~~~~ 164 (216)
T 2xzc_L 90 GTWDSSLNPVFGGGTK--LEIKRTVAAPSV-FIFPPSDEQLKSGTASVVCLL--NNFYPREAKVQWKVDNALQSGNSQES 164 (216)
T ss_dssp EEECTTSCEEEBCCEE--EEECCCCBCCEE-EEECCCHHHHHTTEEEEEEEE--EEEBSSCCEEEEEETTEECCSSEEEE
T ss_pred EEEeCCCcceECCCEE--EEEcCCCCCCce-EEeCCChhhccCCcEEEEEEE--EeEcCCceEEEEEECCeecCCCeeEe
Confidence 9999875 1222223 344333334432 1211 237899999997 4434432 33444443222111 1
Q ss_pred -EEecCCCC------cEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 204 -NLTNLDTP------AFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 204 -~~~~~~~~------~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
........ .|.|..+...|+|.| +|.|.|.....
T Consensus 165 ~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y--~C~a~n~~~~~ 205 (216)
T 2xzc_L 165 VTEQDSKDSTYSLSSTLTLSKADYEKHKVY--ACEVTHQGLSS 205 (216)
T ss_dssp ECCCCTTTCCEEEEEEEEEEHHHHTTCCEE--EEEEECTTCSS
T ss_pred cCcccCCCCCEEEEEEEEECHHHhCCCCcE--EEEEEcCCCCC
Confidence 11111111 577887777889999 99999988654
No 289
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.59 E-value=5.7e-14 Score=113.37 Aligned_cols=235 Identities=9% Similarity=0.010 Sum_probs=134.3
Q ss_pred CCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEE
Q psy11549 2 AGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHC 81 (261)
Q Consensus 2 ~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C 81 (261)
+||.++..+ ++....+.|+|.++...|+|.|.|.+.+ .+. ...+.|.|..+|....... ........+.+..
T Consensus 236 ~ng~~i~~~---ri~~~~~~L~I~nl~~sd~g~y~~~C~~-~~~--i~~~~l~v~~pP~~P~nl~--C~~~~~~svtcsW 307 (488)
T 2q7n_A 236 IGNTLRPLI---HLYGQTVAIHILNIPVSENSGTNIIFIT-DDD--VYGTVVFAGYPPDVPQKLS--CETHDLKEIICSW 307 (488)
T ss_dssp ETTEECCCE---ECSSSCEEEECCSCCCCCSSCEEEEEEE-SSC--EEEEEEEEECCCCCCCSCE--EEBSSSSEEEEEE
T ss_pred ECCEECchh---hccceEEEEEEeCCCcccCCcEEEEEEc-CCe--EEEEEEEeeCCCCCCcccE--EEEcCCCEEEEEE
Confidence 677777432 2211234899999999999999887763 222 3367777877665322211 2222333333333
Q ss_pred EEeeCC-----CCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE--eC
Q psy11549 82 AVEADP-----PARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV--LA 154 (261)
Q Consensus 82 ~~~~~~-----~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~--~~ 154 (261)
...... +...+..+....+....-.... ..........+........+.+++.|.|..|.... .+.+. ..
T Consensus 308 ~pg~~~~l~G~~~t~Y~L~y~~~g~~~~c~~~~-~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~S--~~~~~~~~~ 384 (488)
T 2q7n_A 308 NPGRITGLVGPRNTEYTLFESISGKSAVFHRIE-GLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQS--AVVINVTER 384 (488)
T ss_dssp CCCSCCCCCTTSSCEEEEEETTTCCEEEEECSS-CCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEEE--EEECCGGGT
T ss_pred eCCCcCCCCCCCceeEEEEEEECCCCCCCcccc-ccCCceEEEEEcCCCCccEEEEEEEEEeCCCCccc--eEEEEecCC
Confidence 322211 1113333221111000000000 00012223445433334677899999999888543 33333 23
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCC-CCCCeEEEEEEEeCCccceeEEEec-C-CCCcE--EEcCCCCCCccEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYD-GGLPQTFTLELYSASDLNLLVNLTN-L-DTPAF--TLEDLGLDGTVLMRVV 229 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~-~-~~~~~--~i~~~~l~~~~~Y~~~ 229 (261)
.+|.+|.++.+.......+.|+|.++.. ++....|.+.|+..+.......... . ....+ .|.+ |.+++.|+|+
T Consensus 385 v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~--L~P~T~Y~~r 462 (488)
T 2q7n_A 385 VAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDK--LNPYTAYTFR 462 (488)
T ss_dssp BCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECS--CCSSCCBBCC
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCC--CCCCceEEEE
Confidence 5788999998887788999999997543 3334569999987655421111111 1 12455 8999 9999999999
Q ss_pred EEEEcCCCc---CCceeeeeeeec
Q psy11549 230 ISGVNAKGR---SLPVIWDDFSMS 250 (261)
Q Consensus 230 ~~a~N~~G~---~~~s~~~~~~~~ 250 (261)
|+|.| .|. |++|..+.+.++
T Consensus 463 VRA~~-~g~G~WS~WS~~v~~~T~ 485 (488)
T 2q7n_A 463 VRCSS-KTFWKWSRWSDEKRHLTT 485 (488)
T ss_dssp EEEEE-SSCSSCCCCCCCCCBCCC
T ss_pred EEEEE-CCCCCCCCCcCCEeEECC
Confidence 99999 887 566666666554
No 290
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.59 E-value=9.5e-15 Score=106.38 Aligned_cols=165 Identities=14% Similarity=0.157 Sum_probs=94.8
Q ss_pred EEeeCCCcEEEEEEEeeC-CCCceeEEEEcCCccccc----c-----------CCceEEe--CCceeEEEEecCCCCcCe
Q psy11549 69 VGASRSESVDIHCAVEAD-PPARSFKWKFNNSGETLD----V-----------GSERFSS--GSRGSMLRYTPVTELDYG 130 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~----~-----------~~~~~~~--~~~~~~l~i~~~~~~d~g 130 (261)
+.+.+|++++|.|.+.+. +.+ .+.|++...+.... . ...++.. ......|.|.++..+|+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 10 ASFSLGASAKLTCTLNSQHSTY-TIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEEETTSCEEEEEEECGGGTTC-CEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEECCCCcEEEEEECCCCCCCc-EEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 678899999999999988 666 89999843211100 0 0012221 334567999999999999
Q ss_pred EEEEEEEcCCc---eEEeeEEEEEEeCCCC-CCCCcceEE-----eecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccc
Q psy11549 131 TLSCAAQNAIG---TQVTPCLYQVVLAGKP-QPPQNCSVR-----NETTSSVHISCTPGYDGGLPQT-FTLELYSASDLN 200 (261)
Q Consensus 131 ~y~C~~~~~~~---~~~~~~~~~v~~~~~p-~~p~~~~v~-----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~ 200 (261)
.|+|.+.+..+ .........+.|...| .+|. +.+. ...+..++|.|.+ .+..|.. .+.|+++.....
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~-~~~~~~~~~~~~~~~v~L~C~~--~g~~p~~~~v~W~k~g~~l~ 165 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPT-LTVFPPSSEELKENKATLVCLI--SNFSPSGVTVAWKANGTPIT 165 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCE-EEEECCCHHHHHTTEEEEEEEE--EEEBSSCCEEEEEETTEEC-
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCCCCce-EEeeCCCcccccCCcEEEEEEE--CcccCCCeEEEEEECCEECc
Confidence 99999998765 2222223344444444 2332 2221 1246889999997 3434433 333444432221
Q ss_pred eeE---EEecCC-----CCcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 201 LLV---NLTNLD-----TPAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 201 ~~~---~~~~~~-----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
... ...... ...+.|......++|.| +|.|.|..|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y--~C~a~n~~~~~ 210 (218)
T 3s96_B 166 QGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSF--TCQVTHEGDTV 210 (218)
T ss_dssp -------------CEEEEEEEEEEHHHHHTCSCE--EEEEEETTEEE
T ss_pred CceecCcccccCCcEEEEEEEEEeHHHccCCCeE--EEEEEeCCCcc
Confidence 100 000001 02255655445578999 99999998743
No 291
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.59 E-value=9.2e-16 Score=111.34 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=78.6
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.|..+. .......|.|. .+|.+...... ..+..|+.+.|.|.+.+. |+...+.
T Consensus 70 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~ 148 (212)
T 1nfd_E 70 TLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPS-PEELRTNKATLVCLVNDFYPGSATVT 148 (212)
T ss_dssp EEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCC-HHHHHTTEECCCEEEEEEBSSCCEEE
T ss_pred EEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCc-hHhccCCceEEEEEEEeeECCccEEE
Confidence 8999999999999999999973222 11234566764 34444332211 123468999999999987 4424899
Q ss_pred EEEcCCccccccCCceEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 94 WKFNNSGETLDVGSERFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 94 W~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
|++++................ ..+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 149 W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 149 WKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp EEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred EEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 999874211110000000111 1235889999999999999999998654
No 292
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.59 E-value=4.8e-14 Score=102.30 Aligned_cols=164 Identities=16% Similarity=0.195 Sum_probs=95.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|+.+.|.|.+.+.+.+ .+.|++...+.... ....++. .......|.|.++..+|+|.|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3r06_A 11 LPASLGDRVTINCQASQDISN-YLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQ 89 (213)
T ss_dssp EEECTTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred EEecCCCcEEEEEEeCCCcCc-eEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEe
Confidence 668899999999999998766 89999843211110 0112222 233455899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCCCCCCcceEE-----eecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccce----eEEE
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKPQPPQNCSVR-----NETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNL----LVNL 205 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~-----~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~----~~~~ 205 (261)
+.+..+..... ...+.+..++.+|.. .+. ...+..++|.|.+ .+..| .....|+++...... ....
T Consensus 90 ~~~~~~~~~~~-~~~l~V~~~~~~p~v-~~~~~~~~~~~~~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~ 165 (213)
T 3r06_A 90 QYYNYPWTFGP-GTKLEIKRADAKPTV-SIFPPSSEQLGTGSATLVCFV--NNFYPKDINVKWKVDGSEKRDGVLQSVTD 165 (213)
T ss_dssp ECSSSSCEECC-CEEEEECCCCBCCEE-EEECCCHHHHTTTEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEEEECC
T ss_pred cccCCceEEcC-CceEEEeccCCCcee-eeeCCCceecCCCCcEEEEEE--eeecCCceEEEEEECCcccCCceEeccCc
Confidence 99875432221 223444333334432 221 1247789999997 33334 233344444322211 1111
Q ss_pred ecCCCC------cEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 206 TNLDTP------AFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 206 ~~~~~~------~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
...... .+.|......++|.| +|.|.|.....
T Consensus 166 ~~~~~g~~~~~s~l~i~~~~~~d~g~Y--tC~v~n~~~~~ 203 (213)
T 3r06_A 166 QDSKDSTYSLSSTLSLTKADYERHNLY--TCEVTHKTSTA 203 (213)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCEE--EEEEEETTCSS
T ss_pred eeCCCCcEEEEEEEEeCHHHhccCCeE--EEEEEecccCc
Confidence 111122 344555445578999 99999987543
No 293
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.59 E-value=2.6e-15 Score=109.71 Aligned_cols=174 Identities=15% Similarity=0.146 Sum_probs=103.2
Q ss_pred EEeeCCCcEEEEEEEeeC-CCC---ceeEEEEcCCcccccc----------CCceEEeC-------CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEAD-PPA---RSFKWKFNNSGETLDV----------GSERFSSG-------SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~-~~~---~~~~W~~~~~~~~~~~----------~~~~~~~~-------~~~~~l~i~~~~~~ 127 (261)
+.+..|+++.|.|.+... +.+ ..+.|++++....+.. ...++... .....|.|.++..+
T Consensus 9 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 88 (221)
T 3eow_R 9 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE 88 (221)
T ss_dssp CCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC
T ss_pred EEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH
Confidence 456789999999999553 333 2499998753211100 01122211 13558999999999
Q ss_pred cCeEEEEEEEcCC-ceEEeeEEEEEEeCCCCCCCCcceEEeecCCeE-EEEeecCCCCCCCeEEEEEEEeCCccceeEEE
Q psy11549 128 DYGTLSCAAQNAI-GTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSV-HISCTPGYDGGLPQTFTLELYSASDLNLLVNL 205 (261)
Q Consensus 128 d~g~y~C~~~~~~-~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~-~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (261)
|+|.|+|.+.+.. +.... .+.+.|..+|..+....-....+..+ .|.|.+ .++.|...+.|++...........
T Consensus 89 D~G~Y~C~~~~~~~~~~~~--~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~--~~g~P~p~v~W~k~~~~~~~~~~~ 164 (221)
T 3eow_R 89 DEGSYTCLFVTFPQGSRSV--DIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVS--TGGRPPAQITWHSDLGGMPQTSQV 164 (221)
T ss_dssp CCSCBEEEEEESSSCSCEE--ECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEE--ESCSSCCCEEEECSSSCCCCCEEE
T ss_pred HCeEEEEEEEeCCCCceEE--EEEEEEEECCCceeecCCcccCCceEEEEEEEC--CCccCCCeeEEEeCCCCCCcccee
Confidence 9999999999865 44433 44455555554221100001346677 599997 445665444444432221111111
Q ss_pred ec------CCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 206 TN------LDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 206 ~~------~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.. .....+.|..+...++|.| +|.|.|+.+....+..+...
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~g~y--tC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 165 PGFLSGTVTVTSLWILVPSSQVDGKQV--TCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp CCCCBTTBCCEEEEECCCCSCCCCCCE--EEEECCSCSSSCEEEEECCC
T ss_pred ecCCCCcEEEEEEEEEeCCHHHCCCeE--EEEEECCCCCCCeEEEEEEE
Confidence 10 1124678888888899999 99999999876655555443
No 294
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.58 E-value=7.9e-14 Score=101.12 Aligned_cols=157 Identities=15% Similarity=0.163 Sum_probs=95.0
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-----------CCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-----------GSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-----------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++...+..... ...++. .......|.|.++..+|+|.|+|.
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3nl4_L 11 VSEPVGGTVTIKCQASQSISS-YLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQ 89 (213)
T ss_dssp EEEETTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEEEecCCCCc-eEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEe
Confidence 678899999999999998766 899998532211100 012222 233455899999999999999999
Q ss_pred EEcCCc---eEEeeEEEEEEeCCCCCCCCcceEE-----eecCCeEEEEeecCCCCCCCeEEEEEEEeCCccce----eE
Q psy11549 136 AQNAIG---TQVTPCLYQVVLAGKPQPPQNCSVR-----NETTSSVHISCTPGYDGGLPQTFTLELYSASDLNL----LV 203 (261)
Q Consensus 136 ~~~~~~---~~~~~~~~~v~~~~~p~~p~~~~v~-----~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~----~~ 203 (261)
+.+..+ .......+.+. ..+.+|.. .+. ...|+.++|.|.+ .++.|...+.|+++...... ..
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~--~~~~~p~v-~~~~~~~~~~~g~~v~l~C~~--~g~~P~~~v~W~k~g~~~~~~~~~~~ 164 (213)
T 3nl4_L 90 STYENPTYVSFGGGTEVGVK--GDPVAPTV-LIFPPSADLVATGTVTIVCVA--NKYFPDVTVTWEVDGTTQTTGIENSK 164 (213)
T ss_dssp ECCSSTTTCEECCCEEEEEE--CCCBCCEE-EEECCCHHHHTTSEEEEEEEE--EEEBSCCEEEEEETTEECCSSEEEEE
T ss_pred cCCCCceeEEeCCCeEEEEe--CCCcCCeE-EEeCCchhhccCCcEeEEEEE--ecccCCcEEEEEeCCccCCCCeeccc
Confidence 998765 22333344443 23334432 221 1248899999997 44345433444554322211 11
Q ss_pred EEecCCC------CcEEEcCCCCCCccEEEEEEEEE
Q psy11549 204 NLTNLDT------PAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 204 ~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
....... ..|.|..+...++|.| +|.|.
T Consensus 165 ~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y--~C~a~ 198 (213)
T 3nl4_L 165 TPQNSADCTYNLSSTLTLTSTEYNSHKEY--TCKVT 198 (213)
T ss_dssp CCCCTTTCCEEEEEEEEEEHHHHHTCCEE--EEEEE
T ss_pred CcccCCCCeEEEEEEEEecHHHcCCCCeE--EEEEE
Confidence 0011111 3466888778899999 88887
No 295
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.58 E-value=2.6e-14 Score=107.50 Aligned_cols=119 Identities=17% Similarity=0.201 Sum_probs=77.7
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeecee----------------------ecCceeEEEeeCCCcEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPIC----------------------KSDRIVIVGASRSESVD 78 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~----------------------~~~~~~~~~~~~g~~~~ 78 (261)
+|.|.+++.+|+|.|+|.+.|..+......+.|.|...+.. .........+.+|++++
T Consensus 91 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~ 170 (268)
T 1x9q_A 91 TLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMK 170 (268)
T ss_dssp EEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEE
T ss_pred EEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEE
Confidence 89999999999999999998875533233456777654320 00011125688999999
Q ss_pred EEEEEeeCCC-CceeEEEEcCCccccc------------------cCCceEEeC----CceeEEEEecCCCCcCeEEEEE
Q psy11549 79 IHCAVEADPP-ARSFKWKFNNSGETLD------------------VGSERFSSG----SRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 79 l~C~~~~~~~-~~~~~W~~~~~~~~~~------------------~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
|.|.+.+.++ ...+.|++...+.... ....++... .....|.|.++..+|+|.|+|.
T Consensus 171 L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 250 (268)
T 1x9q_A 171 LSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCT 250 (268)
T ss_dssp EEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEE
Confidence 9999998764 2389999853221110 012233322 2245799999999999999999
Q ss_pred EEcC
Q psy11549 136 AQNA 139 (261)
Q Consensus 136 ~~~~ 139 (261)
+.+.
T Consensus 251 a~~~ 254 (268)
T 1x9q_A 251 GASY 254 (268)
T ss_dssp EEET
T ss_pred EccC
Confidence 9874
No 296
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.58 E-value=5.5e-15 Score=107.89 Aligned_cols=120 Identities=18% Similarity=0.265 Sum_probs=80.9
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcc--eeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEA--TSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~--~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.|..+.
T Consensus 82 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~ 160 (220)
T 1pz5_B 82 YLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPG-CSDTSGSSVTLGCLVKGYFPEPVTVK 160 (220)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-SCCSCSSSEEEEEEEEEEBSSCCEEE
T ss_pred EEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccc-cccCCCCcEEEEEEEEEEeCCCeEEE
Confidence 89999999999999999999875432 12346777763 3433321111 124689999999999987 6555899
Q ss_pred EEEcCCcccc-ccCC----ceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 94 WKFNNSGETL-DVGS----ERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 94 W~~~~~~~~~-~~~~----~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
|++++..... .... ..+. ..+.|.|.....++ |.|+|.|.|..+....
T Consensus 161 W~~~~~~~~~~~~~~~~~~~~~~---~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 213 (220)
T 1pz5_B 161 WNYGALSSGVRTVSSVLQSGFYS---LSSLVTVPSSTWPS-QTVICNVAHPASKVDL 213 (220)
T ss_dssp EGGGTCCTTEEECCCEEETTEEE---EEEEEEECGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred EecCCcccceEEcCCcccCCeEE---EEEEEEEcchhcCC-ceEEEEEEECCccEee
Confidence 9987642110 0110 1111 13468888888766 9999999999886554
No 297
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.58 E-value=2e-14 Score=108.27 Aligned_cols=200 Identities=14% Similarity=0.095 Sum_probs=93.6
Q ss_pred CCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-
Q psy11549 27 VSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV- 105 (261)
Q Consensus 27 ~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~- 105 (261)
.++.|.+.|.|.+.+..|.. .....+.|..+| .. +.+..|++++|.|.+.+ +.+ .+.|++...+.....
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~-~~~~~~~v~~~p------~~-v~v~~G~~v~L~C~~~~-~~~-~v~W~k~~~~~~~~~~ 72 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGS-GGGGGMKVIQTP------RY-LVKGQGQKAKMRCIPEK-GHP-VVFWYQQNKNNEFKFL 72 (270)
T ss_dssp --------------------------CCCEEEC------SE-EEEETTSCEEEEEECCT-TCC-EEEEEEECTTCCEEEE
T ss_pred chhhhHHHHHHHHhccCCcc-ccccceeEEeCC------Ce-EEEcCCCCEEEEEEecC-CCc-eEEEEEECCCCCcEEE
Confidence 46789999999998887654 223334443333 12 66789999999999865 444 899998432211100
Q ss_pred ----C----------CceEEe---CCceeEEEEecCCCCcCeEEEEEEEcCCc----eEEeeEEEEEEeCC-CCCCCCcc
Q psy11549 106 ----G----------SERFSS---GSRGSMLRYTPVTELDYGTLSCAAQNAIG----TQVTPCLYQVVLAG-KPQPPQNC 163 (261)
Q Consensus 106 ----~----------~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~~----~~~~~~~~~v~~~~-~p~~p~~~ 163 (261)
. ..++.. ......|.|.++..+|+|.|.|.+.+... .......+.+.... .+.+|. +
T Consensus 73 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~-v 151 (270)
T 3qib_D 73 INFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPE-V 151 (270)
T ss_dssp EEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCE-E
T ss_pred EEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCc-e
Confidence 0 003322 23356899999999999999999996421 22222234443211 222332 2
Q ss_pred eEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeEEEe--------cCCCC------cEEEcCCCCCC
Q psy11549 164 SVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLVNLT--------NLDTP------AFTLEDLGLDG 222 (261)
Q Consensus 164 ~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~--------~~~~~------~~~i~~~~l~~ 222 (261)
.+.. ..|..++|.|.+ .+..|.. .+.|+++........... ..... .+.|.....++
T Consensus 152 ~~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 229 (270)
T 3qib_D 152 AVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQN 229 (270)
T ss_dssp EEEECCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHS
T ss_pred EEECCCccccccCCceEEEEEe--cceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhcc
Confidence 2221 138899999997 3434433 333444322211111100 00122 23555532334
Q ss_pred -ccEEEEEEEEEcCCCcCCc
Q psy11549 223 -TVLMRVVISGVNAKGRSLP 241 (261)
Q Consensus 223 -~~~Y~~~~~a~N~~G~~~~ 241 (261)
+|.| +|.|.|.....+.
T Consensus 230 ~~g~Y--tC~v~~~~l~~~~ 247 (270)
T 3qib_D 230 PRNHF--RCQVQFYGLSEND 247 (270)
T ss_dssp TTCEE--EEEEEECCBCTTS
T ss_pred CCCeE--EEEEEecCCCCcc
Confidence 8899 9999998775543
No 298
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.58 E-value=7.3e-15 Score=106.45 Aligned_cols=120 Identities=15% Similarity=0.186 Sum_probs=79.4
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEEE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKWK 95 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W~ 95 (261)
+|.|.+++.+|+|.|+|.+.|.. .. ...+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.|..+.|+
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~-~~-~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 155 (210)
T 3d9a_H 79 YLDLNSVTTEDTATYYCANWDGD-YW-GQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTVTWN 155 (210)
T ss_dssp EEEECSCCGGGCEEEEEEETTSS-CB-CCCEEEEECCCCCBCCEEEEECCT-TSCCCSSEEEEEEEEEEEBSSCCEEEEG
T ss_pred EEEECCCCcccCEEEEEEEecCc-cc-ccceEEEeccCCCCCCEEEEecCC-cccccCCcEEEEEEEeeEecCCcEEEEe
Confidence 89999999999999999998863 11 2335677763 3333311111 124589999999999987 555589999
Q ss_pred EcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 96 FNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+++....... .......+ ..+.|.|..+..+| |.|+|.|.|..+....
T Consensus 156 ~~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 156 SGSLSSGVHT-FPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp GGTBCTTEEE-CCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred eCCcccceEE-cCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 8764211111 11111111 13468888888877 9999999998876543
No 299
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.58 E-value=3.1e-14 Score=103.23 Aligned_cols=164 Identities=13% Similarity=0.116 Sum_probs=97.2
Q ss_pred EEeeCCCcEEEEEEEeeCCC--CceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEE
Q psy11549 69 VGASRSESVDIHCAVEADPP--ARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLS 133 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~--~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~ 133 (261)
+.+..|+.++|.|.+.+.+. ...+.|++++.+.... ....++. .......|.|.++..+|+|.|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (212)
T 1q0x_L 10 LTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYF 89 (212)
T ss_dssp EEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEE
Confidence 66789999999999998774 2379999864222110 0112332 2334558999999999999999
Q ss_pred EEEEcCCceEEeeEEEEEEeCCCC-CCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE---
Q psy11549 134 CAAQNAIGTQVTPCLYQVVLAGKP-QPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV--- 203 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~~~~~p-~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~--- 203 (261)
|.+.+..+..... ...+.+...+ .+|. +.+.. ..+..++|.|.+ .+..|.. .+.|+++........
T Consensus 90 C~~~~~~~~~~~~-~~~l~V~~~~~~~P~-v~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~ 165 (212)
T 1q0x_L 90 CALWSNNKLVFGG-GTKLTVLGQPKSSPT-VTLFPPSSEELSTAKATLVCTI--TDFYPGVVTVDWKVDGTPVTAGMETT 165 (212)
T ss_dssp EEEECSSCEEECC-CEEEEECCSCCBCCE-EEEECCCHHHHTTTEEEEEEEE--EEEBSSCCEEEEEETTEEECTTEEEC
T ss_pred EEEecCchhhcCC-CeEEEEecCCCCCCe-eEEeCCCHHHccCCcEEEEEEE--EEEeCCCeEEEEEECCEeCCCCeecC
Confidence 9999976542211 2234443333 2332 22221 247899999997 3434432 334444322111000
Q ss_pred EEecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 204 NLTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 204 ~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
....... ..+.|..+...|.|.| +|.|.|..+.
T Consensus 166 ~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y--~C~a~n~~~~ 204 (212)
T 1q0x_L 166 QPSKQSNNKYMASSYLTLTARAWERHSSY--SCQVTHEGHS 204 (212)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHTTCCEE--EEEEEETTEE
T ss_pred CceeCCCCCEEEEEEEEEcHHHccCCCcE--EEEEEeCCcc
Confidence 0111111 2467777667889999 9999998753
No 300
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.57 E-value=2.8e-14 Score=103.42 Aligned_cols=162 Identities=12% Similarity=0.140 Sum_probs=95.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc--c---------CCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD--V---------GSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~--~---------~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+.+|++++|.|.+. +.+ .+.|++...+.... . ...++. .......|.|.++..+|+|.|+|.
T Consensus 10 ~~v~~G~~v~L~C~~~--~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 10 ASGSPGQSITISCTGT--SNN-FVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEECTTCEEEEEEECC--CSS-CEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred EEEcCCCCEEEEEEEC--CCC-eEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 7788999999999998 555 89999853221110 0 112222 234456899999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCC-CCCCcceEEe-----ecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccce--eE-EE
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKP-QPPQNCSVRN-----ETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNL--LV-NL 205 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p-~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~--~~-~~ 205 (261)
+.+..+.........+.+...+ .+|. +.+.. ..|..++|.|.+ .+..| .....|+++...... .. ..
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~-v~~~~~~~~~~~g~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 163 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPS-VTLFPPSSEELQANKATLVCLI--SDFYPGAVTVAWKADSSPVKAGVETTTP 163 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCE-EEEECCCHHHHHTTCEEEEEEE--EEEBSSCCEEEEEETTEEECTTEEECCC
T ss_pred EecCCCceeECCCceEEEeCCCCcCCe-eEecCCchhhhcCCCeEEEEEe--eeecCCCeEEEEEECCeecCCCcccCCc
Confidence 9998772112113344444333 2332 22221 248999999997 33333 223334444322110 00 00
Q ss_pred ecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 206 TNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 206 ~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
..... ..+.|..+..++.|.| +|.|.|..|.
T Consensus 164 ~~~~~~~~~~~s~L~i~~~~~~d~g~Y--~C~v~~~~~~ 200 (211)
T 3tv3_L 164 SKQSNNKYAASSYLSLTPEQWKSHRSY--SCQVTHEGST 200 (211)
T ss_dssp EECTTSSEEEEEEEEECHHHHHHSSCE--EEEEEETTEE
T ss_pred eECCCCCEEEEEEEEEcHHHhCCCCeE--EEEEEECCCC
Confidence 11111 3466766555679999 9999998864
No 301
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.57 E-value=2.5e-13 Score=100.35 Aligned_cols=161 Identities=17% Similarity=0.161 Sum_probs=96.2
Q ss_pred EEeeCCCcEEEEEEEeeCC---CCceeEEEEcCCccccc--c---------CCceEEe--CCceeEEEEecCCCCcCeEE
Q psy11549 69 VGASRSESVDIHCAVEADP---PARSFKWKFNNSGETLD--V---------GSERFSS--GSRGSMLRYTPVTELDYGTL 132 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~---~~~~~~W~~~~~~~~~~--~---------~~~~~~~--~~~~~~l~i~~~~~~d~g~y 132 (261)
+.+.+|++++|.|.+.+.+ ....+.|+++..+.... . ...++.. ......|.|.++..+|+|.|
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 90 (240)
T 1moe_A 11 LAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATY 90 (240)
T ss_dssp EEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEE
Confidence 6678999999999999887 23389999864221110 0 1122222 23445799999999999999
Q ss_pred EEEEEcCCce-EEeeEEEEEEeCCCCC--CCCc-----ceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeC-Cccce-
Q psy11549 133 SCAAQNAIGT-QVTPCLYQVVLAGKPQ--PPQN-----CSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSA-SDLNL- 201 (261)
Q Consensus 133 ~C~~~~~~~~-~~~~~~~~v~~~~~p~--~p~~-----~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~-~~~~~- 201 (261)
+|.+.+..+. ......+.|. .++. +|.. ..+....|+.++|.|.+ .+..+ ...+.|++.. +....
T Consensus 91 ~C~~~n~~~~~~~~~~~l~V~--~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~g~p~~~~~v~W~k~~~g~~~~~ 166 (240)
T 1moe_A 91 YCQQTNEDPYTFGGGTKLEIK--GGGSGGGGEVQLQQSGAELVEPGASVKLSCTA--SGFNIKDTYMHWVKQRPEQGLEW 166 (240)
T ss_dssp EEEECSSSSCCBCCCEEEEEC--CCSCCCCCCCEEEECCCEEECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCCEE
T ss_pred EEEEccCCceeecCCEEEEEe--cCCCCCCceEEEeCCCceEEeCCCcEEEEEEE--cCccCCCCEEEEEEECCCCCcEE
Confidence 9999997543 2222234443 3321 1110 11233569999999997 33322 2234444432 11110
Q ss_pred -------------------eEEEe---cCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 202 -------------------LVNLT---NLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 202 -------------------~~~~~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
.+... ......|.|.+++.+|+|.| .|.|.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y--~C~a~~~ 220 (240)
T 1moe_A 167 IGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVY--YCAPFGY 220 (240)
T ss_dssp EEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE--EEEECST
T ss_pred EEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEE--EEEEEec
Confidence 11111 12224699999999999999 8888743
No 302
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.57 E-value=2.5e-14 Score=104.57 Aligned_cols=165 Identities=15% Similarity=0.147 Sum_probs=97.4
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCccccc------------------cCCceEEeC----CceeEEEEecC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETLD------------------VGSERFSSG----SRGSMLRYTPV 124 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~------------------~~~~~~~~~----~~~~~l~i~~~ 124 (261)
+.+..|+.++|.|.+.+.+ .+ .+.|++...+.... ....++... .....|.|.++
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 10 GLVQSGGSLRLSCATSGFTFTDY-YMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp CEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred eeEcCCCEEEEEEEecCccCCCC-cEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 4577999999999999765 34 79999864221110 001233322 23558999999
Q ss_pred CCCcCeEEEEEEEcCCc-----eEEeeEEEEEEeCCCCCCCCcceEE----eecCCeEEEEeecCCCCCCCeE-EEEEEE
Q psy11549 125 TELDYGTLSCAAQNAIG-----TQVTPCLYQVVLAGKPQPPQNCSVR----NETTSSVHISCTPGYDGGLPQT-FTLELY 194 (261)
Q Consensus 125 ~~~d~g~y~C~~~~~~~-----~~~~~~~~~v~~~~~p~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~ 194 (261)
..+|+|.|.|.+.+..+ .......+.|.+ .++.+|...... ...|+.++|.|.+ .+..|.. .+.|++
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~ 165 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLV--KGYFPEPVTVTWNS 165 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS-SCCBCCEEEEECCCSCCCCSSEEEEEEEE--EEEBSSCCEEEEGG
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEecc-CCCCCCeEEEccccccccCCCcEEEEEEE--ccEECCCCEEEEec
Confidence 99999999999998653 122222444443 122333221111 1358999999997 3433533 334444
Q ss_pred eCCccce-eE-EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 195 SASDLNL-LV-NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 195 ~~~~~~~-~~-~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
....... .. ..... ....|.|..+...+ |.| +|.|.|..|...
T Consensus 166 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y--~C~a~n~~~~~~ 214 (222)
T 1q9r_B 166 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETV--TCNVAHPASSTK 214 (222)
T ss_dssp GTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCC--EEEEEEGGGTEE
T ss_pred CCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeE--EEEEEccCCCCc
Confidence 4322111 11 11111 11357888866778 999 999999998643
No 303
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.57 E-value=3.6e-14 Score=101.58 Aligned_cols=123 Identities=15% Similarity=0.110 Sum_probs=83.1
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-C---ceeEE
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP-A---RSFKW 94 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~---~~~~W 94 (261)
+..|.|.+++.+|+|.|.|.|.|..+.. +..+.|+|..+|....... ..+..|+.+ |.|.+.+.++ + +++.|
T Consensus 58 ~~~L~I~~v~~~d~G~Y~C~a~n~~~~~-~~~~~ltV~~~P~~~~i~~--~~~~~g~~~-l~C~a~g~~P~~~~~lti~W 133 (210)
T 1gsm_A 58 RSVLTVRNASLSAAGTRVCVGSCGGRTF-QHTVQLLVYAFPNQLTVSP--AALVPGDPE-VACTAHKVTPVDPNALSFSL 133 (210)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCSEEEEES--SSBCTTCCE-EEEEEEEEBCCCTTTEEEEE
T ss_pred ccEEEECccCcccCceEEEEEEeCCCce-EEEEEEEEEecCCCcEEcc--ceEEeCCce-EEEEeCCCCCCCCCCcEEEE
Confidence 4589999999999999999999987765 7789999998886543222 145578888 9999998644 2 48999
Q ss_pred EEcCCccccccC-CceEE-----e---CC----ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 95 KFNNSGETLDVG-SERFS-----S---GS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~-----~---~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
++++........ ..... . .. -.+.+.+.....++.+.|+|.|.+.......
T Consensus 134 lk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 134 LVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp EETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEE
T ss_pred EECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCcc
Confidence 998753211000 00110 0 00 1223444477777778999999987544433
No 304
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.57 E-value=4.6e-14 Score=103.00 Aligned_cols=123 Identities=19% Similarity=0.223 Sum_probs=81.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CC-Cce
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PP-ARS 91 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~-~~~ 91 (261)
.+|+|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+.... . ..+..|+.++|.|.+.+. |. +..
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~-~~~~~g~~v~L~C~~~g~~P~~~~~ 156 (220)
T 2fbj_H 79 LYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-L-PPALSSDPVIIGCLIHDYFPSGTMN 156 (220)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-C-CSSSCCSSEEEEEEEEEEBSCCCEE
T ss_pred EEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-c-ccccCCCcEEEEEEEEeEECCCcEE
Confidence 38999999999999999999987543 112346788864 23332211 1 234689999999999987 54 358
Q ss_pred eEEEEcCCccccccCCceEEeCCc---eeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 92 FKWKFNNSGETLDVGSERFSSGSR---GSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
+.|++++...............+. .+.|.|.....+|.|.|+|.|.|..+...
T Consensus 157 v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 157 VTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 999998743211101000001111 23588888888899999999999887654
No 305
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.57 E-value=2.1e-15 Score=111.17 Aligned_cols=120 Identities=19% Similarity=0.243 Sum_probs=79.5
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeCCCC-ceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEADPPA-RSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...... .....|+.++|.|.+.+.+++ ..+.
T Consensus 92 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~ 170 (234)
T 2j6e_L 92 SLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPS-SEELQANKATLVCLISDFFPGAVTVA 170 (234)
T ss_dssp EEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCC-HHHHTTSCCCEEECCCBCSSCCCEEE
T ss_pred EEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCC-hhHhcCCceEEEEEEEEEcCCceEEE
Confidence 8999999999999999999998772 223345666642 3333211111 112368899999999986543 4899
Q ss_pred EEEcCCccccccCCc--eEEe-C----CceeEEEEecCCCCcCeEEEEEEEcCCceE
Q psy11549 94 WKFNNSGETLDVGSE--RFSS-G----SRGSMLRYTPVTELDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 94 W~~~~~~~~~~~~~~--~~~~-~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 143 (261)
|++++.. +..... .... . ...+.|.|..+..+|.|.|+|.|.|.....
T Consensus 171 W~k~g~~--l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 171 WKADGAP--VKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp EEETTEE--CCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred EEECCEE--CCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 9998742 211110 0000 1 123468889999999999999999986653
No 306
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.57 E-value=1.1e-13 Score=101.91 Aligned_cols=165 Identities=13% Similarity=0.145 Sum_probs=98.4
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+..|+++.|.|.+.+.+.+ .+.|++...+.... ....++. .......|.|.++..+|+|.|+|.
T Consensus 34 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 112 (237)
T 3sob_L 34 LSASVGDRVTITCRASQDVST-AVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQ 112 (237)
T ss_dssp EEEETTCCEEEEEEESSCCTT-CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCCCc-eEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEe
Confidence 678899999999999988666 89999854221110 0112222 233456899999999999999999
Q ss_pred EEcCCceEE-eeEEEEEEeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccce----eEE
Q psy11549 136 AQNAIGTQV-TPCLYQVVLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNL----LVN 204 (261)
Q Consensus 136 ~~~~~~~~~-~~~~~~v~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~----~~~ 204 (261)
+.+..+... ....+.|. ..+.+|.. .+.. ..+..++|.|.+ .+..| ...+.|+++...... ...
T Consensus 113 ~~~~~~~~~~~~~~l~V~--~~~~~p~v-~~~~~~~~~~~g~~v~l~C~~--~~~~p~~~~v~W~k~g~~~~~~~~~~~~ 187 (237)
T 3sob_L 113 QSYTTPPTFGQGTKVEIK--RTVAAPSV-FIFPPSDEQLKSGTASVVCLL--NNFYPREAKVQWKVDNALQSGNSQESVT 187 (237)
T ss_dssp ECSSSSCEECCCEEEEEE--CCCBCCEE-EEECCCHHHHHHTEEEEEEEE--EEEBSSCCEEEEEETTEECCSSEEEEEC
T ss_pred eccCCceEEcCcEEEEEe--cCCCCCce-EEeCCChhhccCCceEEEEEE--cccCCCceEEEEEECCCCCCCceeeccc
Confidence 988664322 22233333 33434432 2211 237789999997 44344 233344444322211 111
Q ss_pred EecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcCCc
Q psy11549 205 LTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRSLP 241 (261)
Q Consensus 205 ~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~ 241 (261)
...... ..+.|.....+++|.| +|.|.|.......
T Consensus 188 ~~~~~~g~~~~~s~L~i~~~~~~d~g~Y--~C~a~n~~~~~~~ 228 (237)
T 3sob_L 188 EQDSKDSTYSLSSTLTLSKADYEKHKVY--ACEVTHQGLSSPV 228 (237)
T ss_dssp CCCTTTCCEEEEEEEEEEHHHHTTCCEE--EEEEECTTCSSCE
T ss_pred ccccCCCcEEEEEEEEEcHHHccCCCcE--EEEEeeCCCCCce
Confidence 111111 2355666557789999 9999999875543
No 307
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.56 E-value=2.5e-15 Score=109.04 Aligned_cols=164 Identities=15% Similarity=0.147 Sum_probs=94.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+..|+.++|.|.+.+.+.+ .+.|++...+.... ....++. .......|.|.++..+|+|.|+|.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (212)
T 1nfd_E 9 ASVTVGETVKITCSGDQLPKN-FAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCL 87 (212)
T ss_dssp EEEETTSCCCEEEEETTGGGS-CCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEE
T ss_pred EEEeCCCcEEEEEecCCCCCC-eEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEE
Confidence 668899999999998777666 79999864322210 0012232 233455899999999999999999
Q ss_pred EEcC-CceEEeeEEEEEEeCCCC-CCCCcceE-----EeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeE---E
Q psy11549 136 AQNA-IGTQVTPCLYQVVLAGKP-QPPQNCSV-----RNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLV---N 204 (261)
Q Consensus 136 ~~~~-~~~~~~~~~~~v~~~~~p-~~p~~~~v-----~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~---~ 204 (261)
+.+. .+.........+.+...+ .+|. +.+ ....|..++|.|.+ .+..|. ..+.|+++........ .
T Consensus 88 ~~n~~~~~~~~~~~~~l~V~~~~~~~p~-v~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~ 164 (212)
T 1nfd_E 88 SSYGDNNDLVFGSGTQLTVLRGPKSSPK-VTVFPPSPEELRTNKATLVCLV--NDFYPGSATVTWKANGATINDGVKTTK 164 (212)
T ss_dssp EEETTTTEEEECCCEEEEEECCCCBCCE-EECCCCCHHHHHTTEECCCEEE--EEEBSSCCEEEEEETTEEECSSCBCCC
T ss_pred EEcccCcccccCCceEEEEccCCCCCCE-EEeeCCchHhccCCceEEEEEE--EeeECCccEEEEEECCeEcCCCeecCC
Confidence 9962 222111112223332222 1221 111 01348899999997 444343 3334444322111000 0
Q ss_pred EecCC-----CCcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 205 LTNLD-----TPAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 205 ~~~~~-----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
..... ...|.|.++..+|+|.| +|.|.|..+.
T Consensus 165 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y--~C~a~n~~~~ 201 (212)
T 1nfd_E 165 PSKQGQNYMTSSYLSLTADQWKSHNRV--SCQVTHEGET 201 (212)
T ss_dssp CBCSSSCEEEEEBCCEEHHHHHTCSCE--EEEEECTTTT
T ss_pred ceecCCCceEEEEEEEchhhcCCCCeE--EEEEEeCCce
Confidence 00011 12366777667889999 9999999875
No 308
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.56 E-value=2.5e-13 Score=101.27 Aligned_cols=163 Identities=13% Similarity=0.069 Sum_probs=96.0
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCccccc-c---------------CCceEEe----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETLD-V---------------GSERFSS----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~-~---------------~~~~~~~----~~~~~~l~i~~~~~ 126 (261)
+.+.+|++++|.|.+.+.+ .+ .+.|++...+.... + ...++.. ......|.|.++..
T Consensus 11 ~~v~~G~~v~L~C~~~g~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 89 (253)
T 3uzq_A 11 ELVKPGASVRLSCTASGFNIKDT-YMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTS 89 (253)
T ss_dssp EEECTTCCEEEEEEECSSCGGGS-CEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCcEEEEEEeeCCcccCc-eEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCc
Confidence 5678999999999998754 34 79999832211110 0 0112222 22355699999999
Q ss_pred CcCeEEEEEEEcCCceEE-eeEEEEEEeC----------CCCCCCCc----ceEEeecCCeEEEEeecCCCCCCCeE---
Q psy11549 127 LDYGTLSCAAQNAIGTQV-TPCLYQVVLA----------GKPQPPQN----CSVRNETTSSVHISCTPGYDGGLPQT--- 188 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~-~~~~~~v~~~----------~~p~~p~~----~~v~~~~~~~~~l~c~~~~~~~~p~~--- 188 (261)
+|+|.|+|.+.+..+... ....+.|... ....+|.. ..+....|+.++|.|.+ .+ .+..
T Consensus 90 ~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~--~~-~~~~~~~ 166 (253)
T 3uzq_A 90 GDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRA--SE-NVDRYGN 166 (253)
T ss_dssp GGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEE--SS-CCEETTE
T ss_pred ccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEe--cC-ccccCCC
Confidence 999999999998654432 2223333321 00111111 12334579999999997 33 3432
Q ss_pred -EEEEEEeCC-ccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcCCC
Q psy11549 189 -FTLELYSAS-DLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNAKG 237 (261)
Q Consensus 189 -~~~~~~~~~-~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G 237 (261)
.+.|++... .... .+.. .......|+|.+++.+|+|.| .|.|.|..+
T Consensus 167 ~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~~~n~~~ 231 (253)
T 3uzq_A 167 SFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATY--FCQRSNEVP 231 (253)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE--EEEECSSSS
T ss_pred cEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEE--EEEEccCCC
Confidence 445555321 1111 1110 111223599999999999999 899988653
No 309
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.56 E-value=2.1e-13 Score=101.80 Aligned_cols=161 Identities=9% Similarity=0.084 Sum_probs=95.5
Q ss_pred EEeeCCCcEEEEEEEeeC--CCCceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEAD--PPARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~--~~~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~ 126 (261)
+.+.+|++++|.|.+.+. +.+ .+.|++...+.... ....++.. ......|.|.++..
T Consensus 16 ~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 94 (256)
T 3juy_B 16 EVKKPGASVKVSCQASGYRFSHF-TVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRS 94 (256)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred ceecCCCeEEEEEEeecccccCc-eEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCc
Confidence 678899999999999884 334 79999743221110 00123332 23355799999999
Q ss_pred CcCeEEEEEEEcC------------CceEEeeEEEEEEeCCCCC------------CCC----cceEEeecCCeEEEEee
Q psy11549 127 LDYGTLSCAAQNA------------IGTQVTPCLYQVVLAGKPQ------------PPQ----NCSVRNETTSSVHISCT 178 (261)
Q Consensus 127 ~d~g~y~C~~~~~------------~~~~~~~~~~~v~~~~~p~------------~p~----~~~v~~~~~~~~~l~c~ 178 (261)
+|+|.|.|.+.+. ......... +.|...+. +|. ...+....|+.++|.|.
T Consensus 95 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~--l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 172 (256)
T 3juy_B 95 ADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTT--VIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCR 172 (256)
T ss_dssp GGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEE--EEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEE
T ss_pred ccCEEEEEeEEeccccccccccccceeEECCceE--EeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEE
Confidence 9999999999986 222222223 34433322 111 11233457999999999
Q ss_pred cCCCCCCCeEEEEEEEeC-Cccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 179 PGYDGGLPQTFTLELYSA-SDLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 179 ~~~~~~~p~~~~~~~~~~-~~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
+ .+..+.....|++.. +.... .+.. .......|+|.+++.+|.|.| .|.|.|..
T Consensus 173 ~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~~~~~~ 243 (256)
T 3juy_B 173 S--SHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALY--YCQVYGAS 243 (256)
T ss_dssp E--SSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEE--EEEECCSS
T ss_pred E--CCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEE--EEEEeeCC
Confidence 7 333321333444432 22111 1100 111224599999999999999 88898843
No 310
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=1.7e-13 Score=103.90 Aligned_cols=159 Identities=10% Similarity=0.100 Sum_probs=95.8
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.+ +...+.|++...+.... ....++.. ......|.|.++..+
T Consensus 36 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 115 (282)
T 1qok_A 36 ELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSE 115 (282)
T ss_dssp EEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChh
Confidence 5678999999999998875 22379999865322110 01123332 223568999999999
Q ss_pred cCeEEEEEEEcCCc---eEE--eeEEEEEEeCCCCC------------CCC----cceEEeecCCeEEEEeecCCCCCCC
Q psy11549 128 DYGTLSCAAQNAIG---TQV--TPCLYQVVLAGKPQ------------PPQ----NCSVRNETTSSVHISCTPGYDGGLP 186 (261)
Q Consensus 128 d~g~y~C~~~~~~~---~~~--~~~~~~v~~~~~p~------------~p~----~~~v~~~~~~~~~l~c~~~~~~~~p 186 (261)
|+|.|.|.+.+..| ... ....+.|. .+|. ++. ...+....|+.++|.|.+ .+ .|
T Consensus 116 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~--~~-~~ 190 (282)
T 1qok_A 116 DTAVYYCNEGTPTGPYYFDYWGQGTTVTVS--SGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSA--SS-SV 190 (282)
T ss_dssp GCEEEEEEEECSSSSCCCEEECCCEEEEEE--C---------------CCCEEEECSEEEECTTCCEEEEEEE--SS-CC
T ss_pred hCEEEEEEeccCCCccceeeeCCCEEEEEe--cCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEe--cC-CC
Confidence 99999999999865 111 22233333 3321 111 112334579999999997 22 23
Q ss_pred eEEEEEEEe-CCccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 187 QTFTLELYS-ASDLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 187 ~~~~~~~~~-~~~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
....|++. .+.... .+.. .......|+|.+++.+|.|.| .|.|.|.
T Consensus 191 -~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~~~ 253 (282)
T 1qok_A 191 -SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATY--YCQQRSS 253 (282)
T ss_dssp -SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE--EEEECSS
T ss_pred -ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEE--EEEEeeC
Confidence 33445553 222110 1111 112234699999999999999 8888875
No 311
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.56 E-value=1.2e-13 Score=100.65 Aligned_cols=167 Identities=15% Similarity=0.164 Sum_probs=95.1
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~ 127 (261)
+.+..|++++|.|.+.+.+ +...+.|+++..+.... ....++... .....|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (219)
T 1c1e_H 10 ELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNE 89 (219)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGG
T ss_pred eEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence 5678999999999999875 22389999874222111 011233321 23468999999999
Q ss_pred cCeEEEEEEEcCCceE--EeeEEEEEEeCCC-CCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcc
Q psy11549 128 DYGTLSCAAQNAIGTQ--VTPCLYQVVLAGK-PQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLELYSASDL 199 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~--~~~~~~~v~~~~~-p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~ 199 (261)
|+|.|+|.+.+..+.. .......+.+... +.+|..... ....|+.+.|.|.+ .+..|.. .+.|+++....
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~ 167 (219)
T 1c1e_H 90 DMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV--KGYFPEPVTVTWNSGSLSS 167 (219)
T ss_dssp GCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEE--EEEBSSCCEEEEGGGTBCT
T ss_pred cCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEc--ccccCCCeEEEEEeCCccc
Confidence 9999999999876311 1111223344332 233322111 11358999999997 3434543 33444443221
Q ss_pred ce-eE-EEecCC----CCcEEEcCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 200 NL-LV-NLTNLD----TPAFTLEDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 200 ~~-~~-~~~~~~----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
.. .. ...... ...+.|..... +.|.| +|.|.|..|...
T Consensus 168 ~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y--~C~a~n~~~~~~ 211 (219)
T 1c1e_H 168 GVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETV--TCNVAHPASSTK 211 (219)
T ss_dssp TEEECCCEESSSCEEEEEEEEEESSST-TTSCC--EEEEEEGGGTEE
T ss_pred ceEecCCcccCCeEEEEEEEEEecccC-CCCEE--EEEEEeCCCCcc
Confidence 10 11 111111 12567755333 55999 999999988543
No 312
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=7e-14 Score=102.92 Aligned_cols=165 Identities=12% Similarity=0.127 Sum_probs=97.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCc-eeEEEEcCCccccc-----------cCCceEEe--CCceeEEEEecCCCCcCeEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPAR-SFKWKFNNSGETLD-----------VGSERFSS--GSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~-----------~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C 134 (261)
+.+..|++++|.|.+.+.+++. .+.|+++..+.... ....++.. ......|.|.++..+|+|.|+|
T Consensus 29 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 108 (234)
T 2j6e_L 29 ASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYC 108 (234)
T ss_dssp CCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEE
T ss_pred EEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEE
Confidence 5678999999999998865432 69999864322110 01123322 2345589999999999999999
Q ss_pred EEEcCCceE-EeeEEEEEEeCCCC-CCCCcceEEe-----ecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeEE--
Q psy11549 135 AAQNAIGTQ-VTPCLYQVVLAGKP-QPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLVN-- 204 (261)
Q Consensus 135 ~~~~~~~~~-~~~~~~~v~~~~~p-~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~~-- 204 (261)
.+.+..+.. .......+.|...| .+|. +.+.. ..|..++|.|.+ .+..|. ..+.|+++.........
T Consensus 109 ~~~~~~~~~~~~~~~~~l~V~~~~~~~p~-v~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~ 185 (234)
T 2j6e_L 109 ATWDDSLSAVIFGGGTKLTVLGQPKAAPS-VTLFPPSSEELQANKATLVCLI--SDFFPGAVTVAWKADGAPVKAGVETT 185 (234)
T ss_dssp EEEETTTTEEEECCCBCCCBCCCCCCCCC-CCEECCCHHHHTTSCCCEEECC--CBCSSCCCEEEEEETTEECCSSEEEC
T ss_pred EEEcCCcceeEecCCEEEEEecCCCCCCc-ccccCCChhHhcCCceEEEEEE--EEEcCCceEEEEEECCEECCCCcccc
Confidence 999987621 11112234443333 2332 22221 247799999997 444454 23344444322111110
Q ss_pred -EecC------CCCcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 205 -LTNL------DTPAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 205 -~~~~------~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
.... ....+.|..+..+|+|.| +|.|.|..+.
T Consensus 186 ~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y--~C~a~n~~~~ 224 (234)
T 2j6e_L 186 KPSKQSNNKYAASSYLSLTPEQWKSHRSY--SCQVTHEGST 224 (234)
T ss_dssp CCCCCTTSCCBCCEEECCCGGGTTTSCCE--EEEEEBTTBC
T ss_pred CceECCCCCEEEEEEEEECHHHcCCCCeE--EEEEEeCCCc
Confidence 0101 113477777778899999 9999999875
No 313
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.55 E-value=1.6e-15 Score=111.72 Aligned_cols=119 Identities=16% Similarity=0.185 Sum_probs=68.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEe---eceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKY---APICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~ 95 (261)
.+|.|.+++.+|+|.|+|.+.|..+........|.|.. +|.+...... .....|+.++|.|.+.+.++ +..+.|+
T Consensus 93 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~-~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 171 (233)
T 3bqu_C 93 FVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWK 171 (233)
T ss_dssp EEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCC-HHhhcCCceEEEEEEccccCCceEEEEE
Confidence 38999999999999999999887654323334566654 3443321111 11236899999999998654 3479999
Q ss_pred EcCCccccccC-Cce--EEe-CC----ceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 96 FNNSGETLDVG-SER--FSS-GS----RGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 96 ~~~~~~~~~~~-~~~--~~~-~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+++.. +... ... ... .+ ..+.|.|.....+|.|.|+|.|.|...
T Consensus 172 k~g~~--~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 172 IDGSE--RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EC-------CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred ECCee--CCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 98742 2111 000 001 11 124688888888999999999998643
No 314
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.55 E-value=1.5e-13 Score=87.15 Aligned_cols=92 Identities=16% Similarity=0.222 Sum_probs=67.4
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC-ce-EEeCCceeEEEEecCCCCcCeEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS-ER-FSSGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~-~~~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
.+|.+...+.. +.+..|+.+.|.|.+.+.|.+ .+.|++++.. +.... .. .........|.|.++..+|+|.|+|
T Consensus 4 ~~P~~~~~p~~-~~~~~G~~~~l~C~~~g~p~p-~v~W~~~g~~--~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 79 (100)
T 2kdg_A 4 GPPRFIQVPEN-MSIDEGRFCRMDFKVSGLPAP-DVSWYLNGRT--VQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYAC 79 (100)
T ss_dssp EEEECCCCCCC-EEEETTCCEEEEEECEEESCC-EEEEEETTEE--ECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEeCCCC-EEecCCCEEEEEEEEEeeCCC-EEEEEECCEE--CcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEE
Confidence 45666554444 678899999999999998888 8999998742 22221 12 2234444689999999999999999
Q ss_pred EEEcCCceEEeeEEEEEE
Q psy11549 135 AAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v~ 152 (261)
.|.|..|.......+.|.
T Consensus 80 ~a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 80 VAKNRAGEATFTVQLDVL 97 (100)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEcCCCeEEEEEEEEEE
Confidence 999999987765444443
No 315
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.55 E-value=3.3e-14 Score=104.37 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=95.5
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccc---cc-----c--CCceEE----------eCCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGET---LD-----V--GSERFS----------SGSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~---~~-----~--~~~~~~----------~~~~~~~l~i~~~~~~d 128 (261)
+.+..|+.+.|.|.+.+.+.+..+.|++++.... +. . ...++. .... ..|.|.++..+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~L~i~~v~~~D 88 (231)
T 2pet_A 10 VEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-GRLVLAEAQVGD 88 (231)
T ss_dssp EEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-CCEEESSCCGGG
T ss_pred EEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-ceEEEcccCccc
Confidence 6788999999999999888523899998754211 00 0 011222 2222 249999999999
Q ss_pred CeEEEEEEEcCC-ceEEeeEEEEEEeCCCCCCCCcce----EEeecCCeE-EEEeecCCCCCCCeEEEEEEEeCCccc--
Q psy11549 129 YGTLSCAAQNAI-GTQVTPCLYQVVLAGKPQPPQNCS----VRNETTSSV-HISCTPGYDGGLPQTFTLELYSASDLN-- 200 (261)
Q Consensus 129 ~g~y~C~~~~~~-~~~~~~~~~~v~~~~~p~~p~~~~----v~~~~~~~~-~l~c~~~~~~~~p~~~~~~~~~~~~~~-- 200 (261)
+|.|+|.+.+.. +.... .+.+.+..+|..|.... +....|..+ .|.|.+ ..+.|.....|++......
T Consensus 89 ~G~Y~C~~~~~~~~~~~~--~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~--~~~~p~p~i~W~~~~~~~~~~ 164 (231)
T 2pet_A 89 ERDYVCVVRAGAAGTAEA--TARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNS--RNGNPAPKITWYRNGQRLEVP 164 (231)
T ss_dssp CEEEEEEEECGGGCEEEE--EEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEE--EEEBSCCEEEEEETTEECCCC
T ss_pred CceEEEEEEecCCCceEE--EEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEe--ECcccCCEEEEEECCccCccc
Confidence 999999999976 54444 45555556665443111 111246766 999996 3344544344554422110
Q ss_pred ----eeE----EEecCCC------CcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 201 ----LLV----NLTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 201 ----~~~----~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
... ....... ..+.|......+.|.| +|.|.|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y--~C~a~n~~ 212 (231)
T 2pet_A 165 VEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASF--HCAAHYSL 212 (231)
T ss_dssp SSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEE--EEEEEEEC
T ss_pred cccccceeecceeEecCCCeEEEEEEEEEecchhhCCceE--EEEEEcCC
Confidence 011 0011111 3466655445569999 99999964
No 316
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.55 E-value=3.1e-14 Score=118.63 Aligned_cols=125 Identities=23% Similarity=0.336 Sum_probs=86.4
Q ss_pred CceEEEECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece---eecCceeEEEeeCCCc-EEEEEEEeeC-
Q psy11549 12 SARIILSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI---CKSDRIVIVGASRSES-VDIHCAVEAD- 86 (261)
Q Consensus 12 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~---~~~~~~~~~~~~~g~~-~~l~C~~~~~- 86 (261)
.+.....+++|.|.+++.+|+|.|+|.+.|..+......+.|.|..+|. +..... . +..+.. +.|.|.+.+.
T Consensus 424 ~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~--~-~~~~~~~~~l~C~~~~~~ 500 (581)
T 3o3u_N 424 SVARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSAS--E-LTAGVPNKVGTCVSEGSY 500 (581)
T ss_dssp GTSEECTTSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCS--E-ECTTSCEEEEEEEEEEEB
T ss_pred CcEEEcCCceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCc--c-cccCCceeEEEEECCCCC
Confidence 3456667789999999999999999999999887656678899876443 322222 2 334444 4679999985
Q ss_pred CCCceeEEEEcCCccccccCCceEEe--------CC----ceeEEEEecCC-CCcCeEEEEEEEcCCce
Q psy11549 87 PPARSFKWKFNNSGETLDVGSERFSS--------GS----RGSMLRYTPVT-ELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 87 ~~~~~~~W~~~~~~~~~~~~~~~~~~--------~~----~~~~l~i~~~~-~~d~g~y~C~~~~~~~~ 142 (261)
|.+ ++.|++++.... .....+.. .. ..+.|.|..+. .++.+.|+|.+.|....
T Consensus 501 P~~-~i~W~~~g~~l~--~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 501 PAG-TLSWHLDGKPLV--PNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp SCC-EEEEEETTEECC--TTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCC-eEEEEECCEECC--CCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 666 899999874322 22222111 11 13468999888 55588999999998643
No 317
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.55 E-value=5.8e-13 Score=97.13 Aligned_cols=165 Identities=15% Similarity=0.088 Sum_probs=97.7
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~ 127 (261)
+.+..|++++|.|.+.+.+. ...+.|++...+.... ....++... .....|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (220)
T 2fbj_H 10 GLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE 89 (220)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG
T ss_pred eEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChh
Confidence 56789999999999987652 2379999864321110 011233322 33568999999999
Q ss_pred cCeEEEEEEEcCCce---EEeeEEEEEEeCCCC-CCCCcceEE----eecCCeEEEEeecCCCCCCCe--EEEEEEEeCC
Q psy11549 128 DYGTLSCAAQNAIGT---QVTPCLYQVVLAGKP-QPPQNCSVR----NETTSSVHISCTPGYDGGLPQ--TFTLELYSAS 197 (261)
Q Consensus 128 d~g~y~C~~~~~~~~---~~~~~~~~v~~~~~p-~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p~--~~~~~~~~~~ 197 (261)
|+|.|.|.+.+..+. .... ..+.|...+ .+|.. .+. ...|..++|.|.+ .+..|. ..+.|++...
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~--~~L~V~~~~~~~P~v-~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~~v~W~~~~~ 164 (220)
T 2fbj_H 90 DTALYYCARLHYYGYNAYWGQG--TLVTVSAESARNPTI-YPLTLPPALSSDPVIIGCLI--HDYFPSGTMNVTWGKSGK 164 (220)
T ss_dssp GCEEEEEEEEETTTEEEEECCC--EEEEECSSCCBCCEE-EEECCCSSSCCSSEEEEEEE--EEEBSCCCEEEEESCCCS
T ss_pred hCEEEEEEEeccccccceecCC--EEEEecCCCCCCCEE-EEeecccccCCCcEEEEEEE--EeEECCCcEEEEEecCCE
Confidence 999999999987543 1122 234443322 23322 111 1358899999997 344353 3334444433
Q ss_pred ccce-eE-EEecCCC-----CcEEEcCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 198 DLNL-LV-NLTNLDT-----PAFTLEDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 198 ~~~~-~~-~~~~~~~-----~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
.... .. ....... ..+.|......++|.| +|.|.|..|...
T Consensus 165 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~y--tC~v~n~~~~~~ 212 (220)
T 2fbj_H 165 DITTVNFPPALASGGRYTMSNQLTLPAVECPEGESV--KCSVQHDSNPVQ 212 (220)
T ss_dssp SCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEE--EEEEEETTSCCE
T ss_pred ecceEecCceECCCCCEEEEEEEEECHHHcCCCCeE--EEEEEcCCCceE
Confidence 2110 01 1111111 2467777667788999 999999998643
No 318
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.54 E-value=1.9e-13 Score=99.97 Aligned_cols=122 Identities=16% Similarity=0.255 Sum_probs=79.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC----c-ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG----E-ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPA 89 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~----~-~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~ 89 (261)
.+|.|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.+
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p 157 (223)
T 1dee_B 79 LYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSC-ENSNPSSTVAVGCLAQDFLPDS 157 (223)
T ss_dssp EEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECT-TCCCSSSEEEEEEEEEEEBSSC
T ss_pred EEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCC-cccCCCCcEEEEEEEEEEeCCC
Confidence 3899999999999999999988753 1 112345788863 3333211100 123589999999999987 555
Q ss_pred ceeEEEE-cCCccccc--c----CCceEEeCCceeEEEEecCCC--CcCeEEEEEEEcCCceEEe
Q psy11549 90 RSFKWKF-NNSGETLD--V----GSERFSSGSRGSMLRYTPVTE--LDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 90 ~~~~W~~-~~~~~~~~--~----~~~~~~~~~~~~~l~i~~~~~--~d~g~y~C~~~~~~~~~~~ 145 (261)
..+.|++ ++...... . ....+. ..+.|.|..... +|.|.|+|.|.|..+....
T Consensus 158 ~~v~W~~~~g~~l~~~~~~~~~~~~~~~~---~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~ 219 (223)
T 1dee_B 158 ITFSWKYKNNSDISSTRGFPSVLRGGKYA---ATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEK 219 (223)
T ss_dssp CEEEEEETTSCBCSCEEECCCEEETTEEE---EEEEEEEECTTTTSTTCCEEEEEEECTTCCEEE
T ss_pred eEEEeEccCCCccceeEECCccccCCeEE---EEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcc
Confidence 5899999 66421110 0 001111 134578877766 7899999999998876544
No 319
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.54 E-value=3e-14 Score=103.61 Aligned_cols=122 Identities=16% Similarity=0.177 Sum_probs=71.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCc---ceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-Ccee
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGE---ATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSF 92 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~---~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~ 92 (261)
+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|. .+|.+...... ..+..|+.++|.|.+.+.++ +..+
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~l~C~~~~~~p~~~~v 154 (215)
T 3nl4_H 76 DLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPC-CGDTPSSTVTLGCLVKGYLPEPVTV 154 (215)
T ss_dssp EEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCC-TTCCC--CEEEEEEEEEEBSSCCEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCC-ccccCCCcEEEEEEEeeeeCCCeEE
Confidence 5999999999999999999887552 12334567776 34444311111 13457999999999998654 4468
Q ss_pred EEEEcCCccccccCCceEEeCCce-eEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 93 KWKFNNSGETLDVGSERFSSGSRG-SMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 93 ~W~~~~~~~~~~~~~~~~~~~~~~-~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.|++++....... .......+.. .......+...| |.|+|.|.|..+....
T Consensus 155 ~W~~~g~~~~~~~-~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~ 206 (215)
T 3nl4_H 155 TWNSGTLTNGVRT-FPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKV 206 (215)
T ss_dssp EEGGGTBCTTEEE-CCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEE
T ss_pred EEeeCCEECCeEe-cCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcce
Confidence 8988764221111 1111111221 111113455667 9999999998775544
No 320
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.54 E-value=4.5e-14 Score=105.29 Aligned_cols=120 Identities=13% Similarity=0.184 Sum_probs=77.5
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC---cceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEee-CCCCcee
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG---EATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEA-DPPARSF 92 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~---~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~~~~ 92 (261)
+|+|.+++.+|+|.|+|.+.+... ......+.|.|. .+|.+...... ..+..|+.++|.|.+.+ .|.+..+
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~~~~v 158 (253)
T 3liz_H 80 FLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPG-SAAQTNSMVTLGCLVKGYFPEPVTV 158 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC-------CCEEEEEEEEEEEBSSCCEE
T ss_pred EEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCC-cccCCCCcEEEEEEEeeEeCCCeEE
Confidence 499999999999999999987631 111334577775 34444322211 23457999999999998 4545589
Q ss_pred EEEEcCCcccccc-----CCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 93 KWKFNNSGETLDV-----GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 93 ~W~~~~~~~~~~~-----~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.|++++....... ....+.. .+.|.|.....+| |.|+|.|.+..+....
T Consensus 159 ~W~~~~~~~~~~~~~~~~~~g~~~~---~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~ 212 (253)
T 3liz_H 159 TWNSGSLSSGVHTFPAVLQSDLYTL---SSSVTVPSSTWPS-ETVTCNVAHPASSTKV 212 (253)
T ss_dssp EEGGGTBCTTEEECCCEEETTEEEE---EEEEEEETTSTTT-SCCEEEEEEGGGTEEE
T ss_pred EEEeCCeecceEeCCccccCCeEEE---EEEEEEcHHHCCC-ceEEEEEEECCCCcce
Confidence 9998764211100 0012211 2468999999899 9999999998775554
No 321
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.54 E-value=3.1e-14 Score=104.49 Aligned_cols=123 Identities=17% Similarity=0.234 Sum_probs=79.6
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC------c--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG------E--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD- 86 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~------~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~- 86 (261)
.+|.|.+++.+|+|.|+|.+.+..| . .....+.|.|.. +|.+...... ..+..|+.++|.|.+.+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~g~~ 158 (228)
T 3bae_H 80 VFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYF 158 (228)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC------CCSEEEEEEEEEEEB
T ss_pred EEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEeccc-ccccCCCCEEEEEEEccEe
Confidence 5899999999999999999988764 1 112336788863 3443321111 234689999999999987
Q ss_pred CCCceeEEEEcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 87 PPARSFKWKFNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 87 ~~~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
|.+..+.|++++...... ........+ ..+.|.|.....++ |.|+|.|.|..+....
T Consensus 159 P~p~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~ 218 (228)
T 3bae_H 159 PEPVTLTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKV 218 (228)
T ss_dssp SSCCEEEEGGGTCCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred CCCEEEEEeeCCcccCce-EcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCE
Confidence 555589999876421111 001111111 13468888888866 9999999998776544
No 322
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.54 E-value=1.8e-13 Score=100.68 Aligned_cols=125 Identities=21% Similarity=0.264 Sum_probs=75.5
Q ss_pred eEEEccCCCCCCEeEEEEEEeCC--Cc---ceeeeEEEEEEe----eceeecCceeEEEeeCC-CcEEEEEEEeeC-CCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTK--GE---ATSNQLKLRVKY----APICKSDRIVIVGASRS-ESVDIHCAVEAD-PPA 89 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~--~~---~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g-~~~~l~C~~~~~-~~~ 89 (261)
+|.|.+++.+|+|.|+|.+.+.. +. .....+.|.|.. +|.+...... ..+..| +.++|.|.+.+. |.+
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~~~~g~~~v~L~C~~~g~~P~p 157 (232)
T 1dn0_B 79 SLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSC-ENSPSDTSSVAVGCLAQDFLPDS 157 (232)
T ss_dssp EEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC-------CCSEEEEEEEEEEBSSC
T ss_pred EEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccc-cccCCCCCcEEEEEEEEEEeCCC
Confidence 89999999999999999998422 11 112345788864 2333211111 123467 999999999987 555
Q ss_pred ceeEEEE-cCCccccccCCceEEeCC---ceeEEEEecCCC--CcCeEEEEEEEcCCceEEee
Q psy11549 90 RSFKWKF-NNSGETLDVGSERFSSGS---RGSMLRYTPVTE--LDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 90 ~~~~W~~-~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~--~d~g~y~C~~~~~~~~~~~~ 146 (261)
..+.|++ ++...............+ ..+.|.|..... +|.|.|+|.+.|..+.....
T Consensus 158 ~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~ 220 (232)
T 1dn0_B 158 ITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKN 220 (232)
T ss_dssp CEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEE
T ss_pred eEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCccee
Confidence 5899999 664211100000000011 134688888776 78999999999988766553
No 323
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.54 E-value=5.4e-14 Score=104.82 Aligned_cols=165 Identities=15% Similarity=0.171 Sum_probs=97.4
Q ss_pred EEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCccccc-----------cCCceEEe--CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPP----ARSFKWKFNNSGETLD-----------VGSERFSS--GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~~-----------~~~~~~~~--~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+..|++++|.|.+.+.++ ...+.|++++.+.... ....++.. ......|.|.++..+|+|.
T Consensus 44 ~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 123 (252)
T 3bkj_L 44 LPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGV 123 (252)
T ss_dssp EEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEE
Confidence 66889999999999988771 2389999865321110 00123322 3345589999999999999
Q ss_pred EEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee-E-
Q psy11549 132 LSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL-V- 203 (261)
Q Consensus 132 y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~-~- 203 (261)
|+|.+.+..+..... ...+.+...+.+|. +.+.. ..|..++|.|.+ .+..|.. .+.|+++....... .
T Consensus 124 Y~C~~~~~~~~~~~~-~~~l~V~~~~~~P~-v~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~ 199 (252)
T 3bkj_L 124 YYCFQASLVPLTFGA-GTKLELKRADAAPT-VSIFPPSSEQLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLN 199 (252)
T ss_dssp EEEEECSBSSCEECC-CEEEEECCCCBCCE-EEEECCCHHHHHHTEEEEEEEE--EEEBSSCCEEEEEETTEEECSSEEE
T ss_pred EEEEEEcCCccEECC-CEEEEEeCCCcCcE-EEEeCCChhhcCCCcEEEEEEE--eeEeCCCcEEEEEECCeecCCCeee
Confidence 999999875432211 12344433333332 22211 247899999997 3434432 23444443221111 1
Q ss_pred --EEecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 204 --NLTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 204 --~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
....... ..+.|..+..+|+|.| +|.|.|.....
T Consensus 200 ~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y--~C~a~n~~~~~ 241 (252)
T 3bkj_L 200 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSY--TCEATHKTSTS 241 (252)
T ss_dssp EECCCCTTTCCEEEEEEEEEEHHHHHHCCEE--EEEEECTTCSS
T ss_pred ecCcccCCCCCEEEEEEEEEcchhccCCCeE--EEEEEeCCCCC
Confidence 1111111 2377888667789999 99999987654
No 324
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.54 E-value=3.4e-14 Score=91.57 Aligned_cols=102 Identities=20% Similarity=0.315 Sum_probs=60.8
Q ss_pred EEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCe
Q psy11549 51 LKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYG 130 (261)
Q Consensus 51 ~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g 130 (261)
+.|.+..+|.+...... ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.. ...+........|.|.++..+|+|
T Consensus 3 ~~v~~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~i~W~~~~~~--~~~-~~~~~~~~~~~~L~i~~v~~~D~G 77 (108)
T 3kvq_A 3 LTVLERVAPTITGNLEN-QTTSIGESIEVSCTASGNPPP-QIMWFKDNET--LVE-DSGIVLKDGNRNLTIRRVRKEDEG 77 (108)
T ss_dssp --------CCCBSCCCC-EEEETTCCEEEECBCC----C-CEEEEESSSB--CCC-BTTEEEETTTTEEEECSCCGGGCE
T ss_pred eeECccCCCceecCCCC-eEEeCCCeEEEEEECcCcCCC-eEEEEECCeE--ccc-CCCeEEeCCCcEEEEeecCcccCE
Confidence 45677778887766554 778899999999999998888 7999998743 222 222333333457999999999999
Q ss_pred EEEEEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 131 TLSCAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 131 ~y~C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
.|+|.+.|..|..... +.+.+..+|..
T Consensus 78 ~Y~C~a~n~~g~~~~~--~~l~V~~~~~~ 104 (108)
T 3kvq_A 78 LYTCQACSVLGCAKVE--AFFIIEGAQEK 104 (108)
T ss_dssp EEEEEEC----CEEEE--EEEEEEC----
T ss_pred EEEEEEEeCCCceEEE--EEEEEeCCCcc
Confidence 9999999998887775 44444455543
No 325
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.54 E-value=9.7e-13 Score=98.69 Aligned_cols=161 Identities=15% Similarity=0.136 Sum_probs=96.4
Q ss_pred EEeeCCCcEEEEEEEeeCCC-----CceeEEEEcCCccccc--c---------CCceEEe--CCceeEEEEecCCCCcCe
Q psy11549 69 VGASRSESVDIHCAVEADPP-----ARSFKWKFNNSGETLD--V---------GSERFSS--GSRGSMLRYTPVTELDYG 130 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-----~~~~~W~~~~~~~~~~--~---------~~~~~~~--~~~~~~l~i~~~~~~d~g 130 (261)
+.+.+|++++|.|.+.+.+. ...+.|++...+.... . ...++.. ......|.|.++..+|+|
T Consensus 15 v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 94 (264)
T 2gjj_A 15 LPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLA 94 (264)
T ss_dssp EEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCE
Confidence 66789999999999988761 3379999854221110 0 1223332 234558999999999999
Q ss_pred EEEEEEEcCCceE-EeeEEEEEEeCCCCC---------------CCC-c----ceEEeecCCeEEEEeecCCCCCCC-eE
Q psy11549 131 TLSCAAQNAIGTQ-VTPCLYQVVLAGKPQ---------------PPQ-N----CSVRNETTSSVHISCTPGYDGGLP-QT 188 (261)
Q Consensus 131 ~y~C~~~~~~~~~-~~~~~~~v~~~~~p~---------------~p~-~----~~v~~~~~~~~~l~c~~~~~~~~p-~~ 188 (261)
.|.|.+.+..+.. .....+.|. .+|. .|. . .......|+.++|.|.. .+..+ ..
T Consensus 95 ~Y~C~~~~~~~~~~~~~~~L~V~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~ 170 (264)
T 2gjj_A 95 VYYCQQYSNYPWTFGGGTRLEIK--RGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKA--SGYSFTGY 170 (264)
T ss_dssp EEEEEECSSSSCEECCCEEEEEE--CC-------------------CCEEEECCCEEECTTCCEEEEEEE--ESSCGGGS
T ss_pred EEEEEEecCCccEecCCEEEEEE--cCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEE--eCCccCCe
Confidence 9999999875421 122234443 3321 010 0 01234579999999997 33322 13
Q ss_pred EEEEEEeC-Ccccee--------------------EEEe---cCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 189 FTLELYSA-SDLNLL--------------------VNLT---NLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 189 ~~~~~~~~-~~~~~~--------------------~~~~---~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
.+.|++.. +..+.. +... ......|.|.+++.+|.|.| .|.|.|.
T Consensus 171 ~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~n~ 239 (264)
T 2gjj_A 171 FINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADY--YCVRSGN 239 (264)
T ss_dssp EEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEE--EEEEECS
T ss_pred EEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEE--EEEEecC
Confidence 44555542 211110 1011 11234799999999999999 8889885
No 326
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.53 E-value=2.9e-14 Score=104.44 Aligned_cols=120 Identities=13% Similarity=0.148 Sum_probs=78.6
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC-----c--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-C
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG-----E--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-P 87 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~-----~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~ 87 (261)
.+|.|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~g~~P 157 (225)
T 1op3_H 79 VYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFP 157 (225)
T ss_dssp EEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCC-TTCCCCCEEEEEEEEEEEBS
T ss_pred EEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEeccc-ccccCCCcEEEEEEEEeEEC
Confidence 4899999999999999999998764 2 112346788874 2333211111 124579999999999987 5
Q ss_pred CCceeEEEEcCCccccccCCceEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 88 PARSFKWKFNNSGETLDVGSERFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 88 ~~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
.+..+.|++++....... .......+ ..+.|.|.....+| |.|+|.|.|..+.
T Consensus 158 ~p~~v~W~~~~~~~~~~~-~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~ 214 (225)
T 1op3_H 158 EPVTVSWNSGALTSGVHT-FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 214 (225)
T ss_dssp SCCEEECCTTSCCTTCEE-CCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGT
T ss_pred CCeEEEEecCCCcCCeEe-cCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCC
Confidence 455899998764211100 00111111 12368898888888 9999999996554
No 327
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.53 E-value=3e-13 Score=85.62 Aligned_cols=90 Identities=20% Similarity=0.290 Sum_probs=66.1
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++. ..+....|.|.++..+|+|.|+|.
T Consensus 5 ~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~v~W~k~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 5 PPTFKVSLMD-QSVREGQDVIMSIRVQGEPKP-VVSWLRNRQP--VRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCK 80 (99)
T ss_dssp EEEEEECCCC-EEEETTCCEEEEEEEEEESCC-EEEEEETTEE--CCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEEcCCc-eEecCCCEEEEEEEEEEcCCC-EEEEEECCEE--CCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEE
Confidence 4555444433 578899999999999999888 8999998742 222223332 234445799999999999999999
Q ss_pred EEcCCceEEeeEEEEE
Q psy11549 136 AQNAIGTQVTPCLYQV 151 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v 151 (261)
|.|..|.......+.|
T Consensus 81 a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 81 AVNEYGARQCEARLEV 96 (99)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEECCCceeEEEEEEE
Confidence 9999988777544443
No 328
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.53 E-value=2e-13 Score=85.42 Aligned_cols=89 Identities=12% Similarity=0.187 Sum_probs=66.0
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+|.+..+... +.+..|+.+.|.|.+.+.|.| .+.|++++.+..+.. ...+........|.|.++..+|+|.|+|.|.
T Consensus 2 ~P~i~~~~~~-~~v~~G~~~~l~C~~~g~P~p-~i~W~k~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILTASRK-IKIKAGFTHNLEVDFIGAPDP-TATWTVGDSGAALAP-ELLVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCEECCCCCE-EEECTTBCCEEEEEEECCSSC-EEEEECSTTTCBCST-TSEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCeEEcCCCc-eEEeCCCEEEEEEEEEEcCCC-EEEEEECCCCcccCC-cEEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 4555444443 778999999999999999998 899999872222221 2233334445689999999999999999999
Q ss_pred cCCceEEeeEEE
Q psy11549 138 NAIGTQVTPCLY 149 (261)
Q Consensus 138 ~~~~~~~~~~~~ 149 (261)
|..|.......+
T Consensus 79 N~~G~~~~~~~l 90 (93)
T 1wit_A 79 NELGEDEAIFEV 90 (93)
T ss_dssp ETTEEEEEEEEE
T ss_pred cCCCeEEEEEEE
Confidence 999977664443
No 329
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=3.5e-13 Score=85.33 Aligned_cols=90 Identities=16% Similarity=0.158 Sum_probs=66.3
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE--eCCceeEEEEecCCCCcCeEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS--SGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+|.+...... ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +........ .......|.|.++..+|+|.|+|.
T Consensus 5 ~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~v~W~k~g~~--~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 5 APKIFERIQS-QTVGQGSDAHFRVRVVGKPDP-ECEWYKNGVK--IERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEECCCC-EEEETTSCEEEEEEEEEESCC-EEEEEETTEE--CCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCceEecCcc-eEEcCCCcEEEEEEEEEeCCC-EEEEEECCEE--CCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEE
Confidence 4555444443 678899999999999998888 8999998742 222222221 234556899999999999999999
Q ss_pred EEcCCceEEeeEEEEE
Q psy11549 136 AQNAIGTQVTPCLYQV 151 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v 151 (261)
|.|..|.......+.|
T Consensus 81 a~N~~g~~~~~~~l~V 96 (99)
T 1g1c_A 81 AINIAGETSSHAFLLV 96 (99)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEECCCcEEEEEEEEE
Confidence 9999998877545444
No 330
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=88.22 Aligned_cols=94 Identities=17% Similarity=0.149 Sum_probs=68.9
Q ss_pred EeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 56 KYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 56 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
..+|.+...... ..+..|+.+.|.|.+.+.|.| .+.|++++.... ......+........|.|.++..+|+|.|+|.
T Consensus 6 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~i~W~k~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 82 (103)
T 3qp3_A 6 DHAPRITLRMRS-HRVPCGQNTRFILNVQSKPTA-EVKWYHNGVELQ-ESSKIHYTNTSGVLTLEILDCHTDDSGTYRAV 82 (103)
T ss_dssp CEEEEEEECCCC-EEEETTCCEEEEEEEEEESCC-EEEEEETTEECC-CCSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCcc-eEEeCCCeEEEEEEEEecCCC-EEEEEECCEECC-CCCCEEEEECCCEEEEEEcCCCcccCEEEEEE
Confidence 345665554444 678899999999999999988 899999874221 11222233344556899999999999999999
Q ss_pred EEcCCceEEeeEEEEEE
Q psy11549 136 AQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~ 152 (261)
|.|..|.......+.|.
T Consensus 83 a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 83 CTNYKGEASDYATLDVT 99 (103)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEEE
Confidence 99999988775455443
No 331
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=3.5e-14 Score=91.89 Aligned_cols=99 Identities=19% Similarity=0.305 Sum_probs=70.5
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceE-EeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERF-SSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+|.+...+.. +.+..|+.+.|.|.+.+.|.+ .+.|++++..... .....+ ........|.|.++..+|+|.|+|.|
T Consensus 9 ~P~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~v~W~~~g~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm3_A 9 RPHFLQAPGD-LTVQEGKLCRMDCKVSGLPTP-DLSWQLDGKPVRP-DSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIA 85 (110)
T ss_dssp CCEEEECCCE-EEEESSSCBCCEEEEECSSCC-EEECBBSSSBCCC-CSSEEEEECTTSCEEEEESSCCGGGCSBBCEEE
T ss_pred CCcEEeCCCc-EEEeCCCEEEEEEEEEEcCCC-EEEEEECCEECCC-CCceEEEEecCCeEEEEEeeCCcccCEEEEEEE
Confidence 4444444443 678899999999999998888 8999997743221 111122 22333458999999999999999999
Q ss_pred EcCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 137 QNAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
.|..|.... .+.+.|..+|.+|.
T Consensus 86 ~n~~g~~~~--~~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 86 TNRAGQNSF--SLELVVAAKESGPS 108 (110)
T ss_dssp ECSSCEEEE--CCEEEEECCCCSSS
T ss_pred ECCCCEEEE--EEEEEEeCCCCCCC
Confidence 999988666 44555556776664
No 332
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.53 E-value=1.4e-12 Score=99.22 Aligned_cols=161 Identities=12% Similarity=0.108 Sum_probs=95.4
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.+. ...+.|++...+.... ....++.. ......|.|.++..+
T Consensus 32 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 111 (291)
T 2gki_A 32 ELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSE 111 (291)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGG
T ss_pred EEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHH
Confidence 56789999999999987662 2279999864321110 00122222 123568999999999
Q ss_pred cCeEEEEEEEcCC-c--eEEeeEEEEEEeCC----------------CCC---CCCcceEEeecCCeEEEEeecCCCCCC
Q psy11549 128 DYGTLSCAAQNAI-G--TQVTPCLYQVVLAG----------------KPQ---PPQNCSVRNETTSSVHISCTPGYDGGL 185 (261)
Q Consensus 128 d~g~y~C~~~~~~-~--~~~~~~~~~v~~~~----------------~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~ 185 (261)
|+|.|.|.+.+.. + .........+.|.. ++. .|. .+....|+.++|.|.+ .+..
T Consensus 112 DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~--~~~v~~G~~v~L~C~~--~~~~ 187 (291)
T 2gki_A 112 DSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPS--SLAVSAGEKVTMSCKS--SQSL 187 (291)
T ss_dssp GCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCS--EEEEETTSCEEEEEEE--SSCC
T ss_pred HCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCC--EEEEcCCCcEEEEEEc--CCcc
Confidence 9999999999864 1 11110112333333 111 122 2334579999999997 3322
Q ss_pred Ce-----EEEEEEEeC-Cccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 186 PQ-----TFTLELYSA-SDLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 186 p~-----~~~~~~~~~-~~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
+. ....|++.. +.... .+.. .......|+|.+++.+|+|.| .|.|.|.
T Consensus 188 ~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~~~ 257 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVY--YCKQSYY 257 (291)
T ss_dssp EETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE--EEEEEET
T ss_pred ccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEE--EEEEccC
Confidence 22 255566653 22111 1110 111224699999999999999 8888774
No 333
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=2.8e-13 Score=88.70 Aligned_cols=98 Identities=10% Similarity=0.120 Sum_probs=72.0
Q ss_pred EEeeceeecC--ceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEE
Q psy11549 55 VKYAPICKSD--RIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTL 132 (261)
Q Consensus 55 V~~~p~~~~~--~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y 132 (261)
+..+|.+..+ ....+.+..|+.+.|.|.+.+.|.| .+.|++++.. +......+........|.|.++..+|+|.|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p-~i~W~k~g~~--l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRP-QVVWTKGGAP--LDTSRVHVRTSDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCC-EEEEEETTEE--CCCSSCEEEECSSEEEEEESSCCTTTCEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCC-EEEEEECCEE--CCCCcEEEEECCCeEEEEECCCChhcCEEE
Confidence 3457776432 2223678899999999999999988 8999998743 222333444555566799999999999999
Q ss_pred EEEEEcCCceEEeeEEEEEEeCCCC
Q psy11549 133 SCAAQNAIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 133 ~C~~~~~~~~~~~~~~~~v~~~~~p 157 (261)
+|.|.|..|.... .+.+.+..+|
T Consensus 95 ~C~a~N~~G~~~~--~~~l~V~~~P 117 (118)
T 2e7c_A 95 ELSVQIENMKDTA--TIRIRVVEKA 117 (118)
T ss_dssp EEEEECSSCEECC--EEEEEEECCC
T ss_pred EEEEEeCCCeEEE--EEEEEEEcCC
Confidence 9999999997666 4555554554
No 334
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.52 E-value=1.7e-13 Score=99.96 Aligned_cols=119 Identities=15% Similarity=0.219 Sum_probs=78.7
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC-cceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEee-CCC-CceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG-EATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEA-DPP-ARSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~-~~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~-~~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.+... ......+.|.|.. +|.+...... .. ..|+.++|.|.+.+ .|. +..+.
T Consensus 82 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~-~~-~~g~~v~L~C~~~~~~P~~~~~v~ 159 (221)
T 3m8o_H 82 FLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLC-ST-QPDGNVVIACLVQGFFPQEPLSVT 159 (221)
T ss_dssp EEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECC-SC-CCTTEEEEEEEEEEEBSSCSEEEE
T ss_pred EEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCc-cc-ccCCCEEEEEEEEeeECCCCEEEE
Confidence 699999999999999999988642 2223445677752 2332211111 11 58999999999998 554 45899
Q ss_pred EEEcCCccccc-------cCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 94 WKFNNSGETLD-------VGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 94 W~~~~~~~~~~-------~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
|++++...... .....+.. .+.|.|.....+|.|.|+|.|.+..+...
T Consensus 160 W~~~g~~~~~~~~~~~~~~~~~~~~~---~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 160 WSESGQGVTARNFPPSQDASGDLYTT---SSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp ESCCSTTCEEEECCCEECSSSSCEEE---EEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEECCEECceEEcCceeeCCCCcEEE---EEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 99876432110 01111211 23588999989999999999999865433
No 335
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.52 E-value=9.5e-15 Score=105.64 Aligned_cols=119 Identities=13% Similarity=0.086 Sum_probs=75.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEE--EEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKL--RVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l--~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~ 95 (261)
++|.|.+++.+|+|.|+|.|.|..+.. ....+.+ .+..+|.+...... .....|+.+.|.|.+.+.++ +..+.|+
T Consensus 68 ~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 2vol_A 68 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPP-KEQMAKDKVSLTCMITDFFPEDITVEWE 146 (207)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCC-TGGGSSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCC-HHHhcCCceEEEEEEeeEECCCCEEEEE
Confidence 479999999999999999999987753 1223333 34456654322211 11225899999999998644 3589999
Q ss_pred EcCCccccccC-CceEEeC-Cc----eeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 96 FNNSGETLDVG-SERFSSG-SR----GSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 96 ~~~~~~~~~~~-~~~~~~~-~~----~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+++.. +... ....... ++ .+.|.+.....+|.|.|+|.|.|...
T Consensus 147 k~g~~--l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 147 SNGQP--AENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp ETTEE--CSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred ECCEe--ccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 98742 2111 1111111 11 12355555555678999999999754
No 336
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.51 E-value=1.9e-14 Score=103.72 Aligned_cols=150 Identities=13% Similarity=0.154 Sum_probs=88.8
Q ss_pred eeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEE
Q psy11549 71 ASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQ 150 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~ 150 (261)
+..|+.++|.|.+ |.+ .+.|++++.. +... ......|.|.++..+|+|.|+|.+.+.... ...+.
T Consensus 15 ~~~G~~v~L~C~~---p~~-~i~W~k~g~~--l~~~------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~---~~~v~ 79 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAK-NITWFKDGKM--IGFL------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSK---PLQVY 79 (204)
T ss_dssp CCSSSEEEEEECS---CSS-EEEEEETTEE--EEEE------ESSCCCEEEEEGGGCCEEEEEEESSSSCCC---CEEEE
T ss_pred ecCCCeEEEEEcC---CCC-EEEEEECCEE--CCCC------CCCCCeEEeCCCCcCCCEEEEEEecCCCCe---eEEEE
Confidence 3589999999998 455 8999997742 2110 112346999999999999999997553221 11222
Q ss_pred EEe------C-------------------C----CCC---CCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCc
Q psy11549 151 VVL------A-------------------G----KPQ---PPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASD 198 (261)
Q Consensus 151 v~~------~-------------------~----~p~---~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~ 198 (261)
+.. . . ++. .|. .+. ..|+.++|.|.. . ....+ .|+++...
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~v~-~~G~~v~L~C~g-~---p~p~i-~W~k~~~~ 151 (204)
T 1sy6_A 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY--KVS-ISGTTVILTCPQ-Y---PGSEI-LWQHNDKN 151 (204)
T ss_dssp EEC------------------------------------CCCC--EEE-EETTEEEEECSC-C---CSSCE-EEEETTEE
T ss_pred EEEeccccccccccccccccccccccccccccccccceecCCc--eee-ecCCcEEEEcCC-C---CCCce-EEEECCEE
Confidence 220 0 0 110 111 221 259999999982 1 11223 34444322
Q ss_pred ccee---EEEecCCCCcEEEcCC-CCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 199 LNLL---VNLTNLDTPAFTLEDL-GLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 199 ~~~~---~~~~~~~~~~~~i~~~-~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.... .... .....|.|.++ +..|+|.| +|.|.|..|.. .+..+.+
T Consensus 152 l~~~~~~~~~~-~~~~~L~I~~v~~~~D~G~Y--~C~A~N~~g~~-~s~~l~l 200 (204)
T 1sy6_A 152 IGGDEDDKNIG-SDEDHLSLKEFSELEQSGYY--VCYPRGSKPED-ANFYLYL 200 (204)
T ss_dssp ESCCTTCTTEE-EETTEEEETTCCHHHHCEEE--EEEETTSCGGG-SSCEEEE
T ss_pred CCCccCCceEe-cCCCEEEEeeCCccccCEEE--EEEeccCCCCc-eeEEEEE
Confidence 1100 0011 12578999998 88999999 99999999953 3444433
No 337
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=1.6e-13 Score=88.69 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=70.1
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE--eC-CceeEEEEecCCCCcCeEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS--SG-SRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~-~~~~~l~i~~~~~~d~g~y~C 134 (261)
+|.+...... ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++. .. .....|.|.++..+|+|.|+|
T Consensus 8 ~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~v~W~k~g~~--~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm2_A 8 APFFEMKLKH-YKIFEGMPVTFTCRVAGNPKP-KIYWFKDGKQ--ISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTI 83 (110)
T ss_dssp CCCBSSCCCC-EEEETTCCEEEEEEBCCSSCC-EEEEECSSCB--CCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEE
T ss_pred CCEEEecCcC-eEEeCCCeEEEEEEEEecCCC-EEEEEECCEE--CCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEE
Confidence 4555444443 678899999999999998888 8999998743 222222332 22 334579999999999999999
Q ss_pred EEEcCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 135 AAQNAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
.+.|..|..... +.+.|..+|.+|.
T Consensus 84 ~a~N~~g~~~~~--~~l~V~~~~~~P~ 108 (110)
T 2dm2_A 84 MAANPQGRISCT--GRLMVQAVNSGPS 108 (110)
T ss_dssp EEECTTCCEEEC--CCEEEECCSCCSS
T ss_pred EEEECCCeEEEE--EEEEEECCCCCCC
Confidence 999999987664 3445556666553
No 338
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.51 E-value=3.3e-13 Score=98.94 Aligned_cols=172 Identities=13% Similarity=0.118 Sum_probs=96.3
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCccccc-c---------------CCceEEe----CCceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETLD-V---------------GSERFSS----GSRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~-~---------------~~~~~~~----~~~~~~l~i~~~~~ 126 (261)
+.+..|++++|.|.+.+.+ .+ .+.|++...+.... + ...++.. ......|.|.++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (227)
T 1mju_H 10 ELVKPGASVKLSCKASGYTFTNY-WINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTS 88 (227)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEEcCCCCEEEEEEecCCccccc-eEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCc
Confidence 5678999999999999876 34 79999865322110 0 0123332 13456899999999
Q ss_pred CcCeEEEEEEEcCCceE-EeeEEEEEEeCC-CCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcc
Q psy11549 127 LDYGTLSCAAQNAIGTQ-VTPCLYQVVLAG-KPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLELYSASDL 199 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~-~~~~~~~v~~~~-~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~ 199 (261)
+|+|.|.|.+.+..... ..... +.|.. ++.+|..... ....|+.++|.|.+ .+..|.. .+.|+++....
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~--L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 89 DDSAVYYCANKLGWFPYWGQGTL--VTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLV--KGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp GGCEEEEEEEEETTEEEECCCEE--EEECSSCCBCCEEEEECCCC------CEEEEEEE--EEEBSSCCEEEEGGGTBCT
T ss_pred ccCEEEEEEECCCCceEEcCcEE--EEEcCCCCCCCEEEEecCCccccCCCcEEEEEEe--ecEeCCCeEEEEecCCCcC
Confidence 99999999999864321 12223 34433 2223321111 11348899999997 3433432 33333433221
Q ss_pred ce-eE-EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 200 NL-LV-NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 200 ~~-~~-~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.. .. ..... ....+.|..+...+ |.| +|.|.|..+.......+.+.
T Consensus 165 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y--~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 165 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSI--TCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp TEEECCCEEETTEEEEEEEEEECTTTTTT-SCC--EEEEEEGGGTEEEEEECCCC
T ss_pred CcEECCceecCCeEEEEEEEEEchhhcCC-CeE--EEEEEECCCCcceEEEeCCC
Confidence 10 00 00000 12457888866667 999 99999987765444444433
No 339
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.50 E-value=5.2e-13 Score=99.07 Aligned_cols=166 Identities=14% Similarity=0.074 Sum_probs=93.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccc--------------cc--cCCceEEe---CCceeEEEEecCCCCcC
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGET--------------LD--VGSERFSS---GSRGSMLRYTPVTELDY 129 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~--------------~~--~~~~~~~~---~~~~~~l~i~~~~~~d~ 129 (261)
+.+.+|+.++|.|.+.+.+.+ .+.|++...+.. .. ....++.. ......|.|.++..+|+
T Consensus 11 ~~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 11 VISKSGTSVKIECRSLDFQAT-TMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEEETTSCEEEEEEESSSCCC-SEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEEeCCCcEEEEeEecCCCce-EEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 667899999999999988777 899998321111 00 00123322 23355899999999999
Q ss_pred eEEEEEEEcCCc----eEEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCC
Q psy11549 130 GTLSCAAQNAIG----TQVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSAS 197 (261)
Q Consensus 130 g~y~C~~~~~~~----~~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~ 197 (261)
|.|.|.+.+..+ .......+.+.... .+.+|.. .+.. ..|..++|.|.+ .+..|.. .+.|+++..
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i-~~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~ 166 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEV-AVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGK 166 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEE-EEECCCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTE
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCce-EeecCCchhccCCCcEEEEEEE--ccCcCCceEEEEEECCE
Confidence 999999987543 11222234343211 2223321 2211 238899999997 3434432 233444322
Q ss_pred ccceeEEEec--------CCCC------cEEEcCCCCCC-ccEEEEEEEEEcCCCcCC
Q psy11549 198 DLNLLVNLTN--------LDTP------AFTLEDLGLDG-TVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 198 ~~~~~~~~~~--------~~~~------~~~i~~~~l~~-~~~Y~~~~~a~N~~G~~~ 240 (261)
.......... .... .+.|......+ +|.| +|.|.|.....+
T Consensus 167 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~Y--tC~v~~~~~~~~ 222 (246)
T 4dzb_B 167 EVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF--RCQVQFYGLSEN 222 (246)
T ss_dssp EECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEE--EEEEEECCBCTT
T ss_pred ECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeE--EEEEEecCCCCc
Confidence 1111111100 0112 25666644555 8999 999999887655
No 340
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.50 E-value=9.5e-13 Score=98.96 Aligned_cols=163 Identities=12% Similarity=0.199 Sum_probs=94.1
Q ss_pred EEeeCCCcEEEEEEEeeCCC----CceeEEEEcCCccccc--c---------CCceEEe--CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPP----ARSFKWKFNNSGETLD--V---------GSERFSS--GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~----~~~~~W~~~~~~~~~~--~---------~~~~~~~--~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+.+|++++|.|.+.+.+. ...+.|++...+.... . ...++.. ......|.|.++..+|+|.
T Consensus 25 ~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 104 (268)
T 1x9q_A 25 LPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGV 104 (268)
T ss_dssp ECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEE
Confidence 56789999999999988763 3489999864322110 0 1223332 2345589999999999999
Q ss_pred EEEEEEcCCceE-EeeEEEEEEeCC---CC-CCCC------------cc------eEEeecCCeEEEEeecCCCCCCC-e
Q psy11549 132 LSCAAQNAIGTQ-VTPCLYQVVLAG---KP-QPPQ------------NC------SVRNETTSSVHISCTPGYDGGLP-Q 187 (261)
Q Consensus 132 y~C~~~~~~~~~-~~~~~~~v~~~~---~p-~~p~------------~~------~v~~~~~~~~~l~c~~~~~~~~p-~ 187 (261)
|.|.+.+..+.. .....+.|.... .| .+|. .+ .+....|+.++|.|.. .+..+ .
T Consensus 105 Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~ 182 (268)
T 1x9q_A 105 YFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVT--SGFTFGH 182 (268)
T ss_dssp EEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEE--ESSCGGG
T ss_pred EEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEe--cCccccc
Confidence 999999875421 122233333211 11 1111 01 1234579999999997 33332 2
Q ss_pred EEEEEEEeC-Cccce----------------------eEEEec---CCCCcEEEcCCCCCCccEEEEEEEEEcC
Q psy11549 188 TFTLELYSA-SDLNL----------------------LVNLTN---LDTPAFTLEDLGLDGTVLMRVVISGVNA 235 (261)
Q Consensus 188 ~~~~~~~~~-~~~~~----------------------~~~~~~---~~~~~~~i~~~~l~~~~~Y~~~~~a~N~ 235 (261)
....|++.. +.... .+.... .....|.|.+++.+|+|.| .|.|.|.
T Consensus 183 ~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~a~~~ 254 (268)
T 1x9q_A 183 YWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIY--YCTGASY 254 (268)
T ss_dssp CEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE--EEEEEET
T ss_pred cEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEE--EEEEccC
Confidence 344455432 21110 111110 1124699999999999999 8888774
No 341
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.50 E-value=2.9e-13 Score=88.28 Aligned_cols=97 Identities=23% Similarity=0.348 Sum_probs=69.9
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEe--C-CceeEEEEecCCCCcCeEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSS--G-SRGSMLRYTPVTELDYGTLS 133 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~--~-~~~~~l~i~~~~~~d~g~y~ 133 (261)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++.. . .....|.|.++..+|+|.|+
T Consensus 14 ~~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~p-~v~W~k~~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (116)
T 2kkq_A 14 RAPMFIYKPQS-KKVLEGDSVKLECQISAIPPP-KLFWKRNNEM--VQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYT 89 (116)
T ss_dssp BCCCBSSCCCC-EEEETTEEEEEEEEBCCBSCC-EEEEEETTEE--CCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEeCCCc-EEEeCCCcEEEEEEEeccCCC-EEEEEECCEE--CcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEE
Confidence 45566555554 778899999999999998888 8999998743 2222233322 2 23447999999999999999
Q ss_pred EEEEcCCceEEeeEEEEEEeCCCCCC
Q psy11549 134 CAAQNAIGTQVTPCLYQVVLAGKPQP 159 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~~~~~p~~ 159 (261)
|.|.|..|..... +.+.|..+|.+
T Consensus 90 C~a~N~~G~~~~~--~~l~V~~~p~~ 113 (116)
T 2kkq_A 90 VSAVNEAGVTTCN--TRLDVTARPNQ 113 (116)
T ss_dssp EEEEETTEEEEEE--EEEEEECCSCC
T ss_pred EEEEcCCCeEEEE--EEEEEeCCCCC
Confidence 9999999887664 44444455543
No 342
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.50 E-value=4.3e-14 Score=106.30 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=76.3
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCC-CcceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeCCC-Cc
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTK-GEATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEADPP-AR 90 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~-~~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~ 90 (261)
+.+|.|.+++.+|+|.|+|.+.+.. .........|.|.. +|.+.........+..|+.++|.|.+.+.++ +.
T Consensus 99 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 178 (268)
T 3pl6_D 99 VSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 178 (268)
T ss_dssp SEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCe
Confidence 4589999999999999999998742 22223445677764 3332211111012345899999999998665 44
Q ss_pred eeEEEEcCCccccccC---------------CceEEeCCceeEEEEecCCCCc-CeEEEEEEEcCCce
Q psy11549 91 SFKWKFNNSGETLDVG---------------SERFSSGSRGSMLRYTPVTELD-YGTLSCAAQNAIGT 142 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~---------------~~~~~~~~~~~~l~i~~~~~~d-~g~y~C~~~~~~~~ 142 (261)
.+.|++++.. +... ...+.. .+.|.|.....+| .|.|+|.+.+....
T Consensus 179 ~v~W~~~g~~--l~~~~~~~~~~~~~~~~~~~~~~~~---~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 179 ELSWWVNGKE--VHSGVCTDPQPLKEQPALNDSRYSL---SSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp EEEEEESSSE--ECTTEEECSSCEESSTTCTTCCEEE---EEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEEECCEE--CCCCeEeccccccccccCCCCcEEE---EEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 8999998742 2111 111111 2356777766666 99999999987543
No 343
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.50 E-value=2.5e-13 Score=99.04 Aligned_cols=164 Identities=15% Similarity=0.196 Sum_probs=96.0
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCcccc----cc--------------CCceEEe----CCceeEEEEecC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETL----DV--------------GSERFSS----GSRGSMLRYTPV 124 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~----~~--------------~~~~~~~----~~~~~~l~i~~~ 124 (261)
+.+..|++++|.|.+.+.+ .+ .+.|++.+.+... .. ...++.. ......|.|.++
T Consensus 10 ~~~~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 10 GLVQPGGSMKLSCVASGFTFSNY-WMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp EEECTTCCEEEEEEEESSCGGGS-EEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred EEEcCCCeEEEEEEEcCCccCCc-cEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 5678999999999998765 34 8999986422110 00 0123332 123458999999
Q ss_pred CCCcCeEEEEEEEcCCceE-E--eeEEEEEEeCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEEEEeC
Q psy11549 125 TELDYGTLSCAAQNAIGTQ-V--TPCLYQVVLAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLELYSA 196 (261)
Q Consensus 125 ~~~d~g~y~C~~~~~~~~~-~--~~~~~~v~~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~ 196 (261)
..+|+|.|.|.+.+..+.. . ....+.|.+ .++.+|..... ....|+.++|.|.+ .+..|.. .+.|++..
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~ 165 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS-ATTTAPSVYPLVPGCSDTSGSSVTLGCLV--KGYFPEPVTVKWNYGA 165 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECS-SCCBCCEEEEECCCSCCSCSSSEEEEEEE--EEEBSSCCEEEEGGGT
T ss_pred CHHHCEEEEEEEecCCcccceECCCEEEEEcc-CCCCCCeEEEcccccccCCCCcEEEEEEE--EEEeCCCeEEEEecCC
Confidence 9999999999999875321 1 223444432 22333322111 11358999999997 4443533 33344433
Q ss_pred Cccc-eeE-EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 197 SDLN-LLV-NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 197 ~~~~-~~~-~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
.... ... ..... ....+.|..+..++ |.| +|.|.|..|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y--~C~a~n~~~~~ 211 (220)
T 1pz5_B 166 LSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTV--ICNVAHPASKV 211 (220)
T ss_dssp CCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCC--EEEEEEGGGTE
T ss_pred cccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceE--EEEEEECCccE
Confidence 3210 000 00000 12457777766655 999 99999999953
No 344
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.50 E-value=7.9e-13 Score=83.64 Aligned_cols=93 Identities=16% Similarity=0.296 Sum_probs=67.2
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.... ......+........|.|.++..+|+|.|+|.+
T Consensus 5 ~~P~i~~~~~~-~~v~~G~~~~l~C~~~g~p~p-~v~W~~~g~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 81 (99)
T 3puc_A 5 SKPVIVTGLQD-TTVSSDSVAKFAVKATGEPRP-TAIWTKDGKAIT-QGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTV 81 (99)
T ss_dssp EEEEEEECCCC-EEEESSSCEEEEEEEEEESCC-EEEEEETTEECC-SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEecCcc-EEEeCCCcEEEEEEEEecCCC-EEEEEECCEECc-CCCCEEEEEeCCEEEEEECCCCcccCEEEEEEE
Confidence 34454444443 678899999999999998888 899999774211 112222333444557999999999999999999
Q ss_pred EcCCceEEeeEEEEEE
Q psy11549 137 QNAIGTQVTPCLYQVV 152 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~ 152 (261)
.|..|.......+.|.
T Consensus 82 ~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 82 KNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EeCCCcEeEEEEEEEE
Confidence 9999887775555543
No 345
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.50 E-value=2.4e-13 Score=98.82 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=94.8
Q ss_pred CCCCeeccCCCC-ceEEEE---CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCc
Q psy11549 1 MAGGIPLAHNTS-ARIILS---NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSES 76 (261)
Q Consensus 1 ~~ng~~l~~~~~-~~~~~~---~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~ 76 (261)
+|||.+|..+.. +..+.. +++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+|.... .. .....+..
T Consensus 53 ~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~P~~p~--~~-~~~~~~~~ 128 (215)
T 3mtr_A 53 FRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQE-SLEFILVQADTPSSPS--ID-QVEPYSST 128 (215)
T ss_dssp EETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEE-EEEEEEEECCCCCCCE--EE-EEEEETTE
T ss_pred EECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCce-EEEEEEEECCCCCCCc--ce-EEEEecce
Confidence 478999975532 233332 3589999999999999999999999987 6678888877664321 11 22345778
Q ss_pred EEEEEEEeeCC--CCc---eeEEEEcCCccccccCCceEEe--CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEE
Q psy11549 77 VDIHCAVEADP--PAR---SFKWKFNNSGETLDVGSERFSS--GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLY 149 (261)
Q Consensus 77 ~~l~C~~~~~~--~~~---~~~W~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~ 149 (261)
+.|.|...... .+. .+.|...+.. .+ ....+.. ......+.|.++...+.|.|+|.|.|..|....+..+
T Consensus 129 ~~l~w~~p~~~~~~pi~~y~v~~~~~~~~-~w--~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~ 205 (215)
T 3mtr_A 129 AQVQFDEPEATGGVPILKYKAEWRAVGEE-VW--HSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAAS 205 (215)
T ss_dssp EEEEEECCSCCCSSCEEEEEEEEEETTCC-CC--EEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCE
T ss_pred EEEEEecCCccCCCceEEEEEEEEECCCC-cc--cccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccce
Confidence 89999754321 122 3777766532 11 0111111 1112479999999999999999999999876654344
Q ss_pred E
Q psy11549 150 Q 150 (261)
Q Consensus 150 ~ 150 (261)
.
T Consensus 206 ~ 206 (215)
T 3mtr_A 206 E 206 (215)
T ss_dssp E
T ss_pred e
Confidence 3
No 346
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.49 E-value=1.3e-14 Score=105.69 Aligned_cols=120 Identities=17% Similarity=0.144 Sum_probs=73.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEE--EEEeeceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKL--RVKYAPICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l--~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~W~ 95 (261)
++|.|.+++.+|+|.|+|.+.|..+.. ....+.+ .+..+|.+...... .....|+.+.|.|.+.+. |.+..+.|+
T Consensus 76 ~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 154 (218)
T 2rgs_A 76 STLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPP-AEQLSRKDVSLTCLVVGFNPGDISVEWT 154 (218)
T ss_dssp EEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCC-GGGTTSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCC-hHHhcCCceEEEEEEEeeeCCCcEEEEE
Confidence 479999999999999999999987653 1222221 33455554322111 111258999999999984 555589999
Q ss_pred EcCCccccccCCceEE-eCCc----eeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 96 FNNSGETLDVGSERFS-SGSR----GSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 96 ~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+++... .......+. ..++ .+.|.+.....+|.|.|+|.|.|...
T Consensus 155 k~g~~~-~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 155 SNGHTE-ENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp ETTEEE-CCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred ECCEec-cCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 987421 111011111 1111 12344544444568999999999754
No 347
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.49 E-value=2.1e-13 Score=98.74 Aligned_cols=165 Identities=17% Similarity=0.189 Sum_probs=95.0
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc---------------cCCceEEe----CCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD---------------VGSERFSS----GSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~---------------~~~~~~~~----~~~~~~l~i~~~~~~d 128 (261)
+.+..|++++|.|.+.+.+. ...+.|++...+.... ....++.. ......|.|.++..+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 10 SLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 89 (210)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCccc
Confidence 45679999999999998752 2389999864221110 01123332 1234589999999999
Q ss_pred CeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee-
Q psy11549 129 YGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL- 202 (261)
Q Consensus 129 ~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~- 202 (261)
+|.|.|.+.+.. .......+.|.. .++.+|..... ....|+.++|.|.+ .+..|.. .+.|++........
T Consensus 90 ~G~Y~C~~~~~~-~~~~~~~l~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~~~~~~~~ 165 (210)
T 3d9a_H 90 TATYYCANWDGD-YWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHT 165 (210)
T ss_dssp CEEEEEEETTSS-CBCCCEEEEECC-CCCBCCEEEEECCTTSCCCSSEEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEE
T ss_pred CEEEEEEEecCc-ccccceEEEecc-CCCCCCEEEEecCCcccccCCcEEEEEEE--eeEecCCcEEEEeeCCcccceEE
Confidence 999999999863 111222333332 22333321111 11358999999997 4443533 33344433221100
Q ss_pred E-EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 203 V-NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 203 ~-~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
. ..... ....+.|..+..++ |.| +|.|.|..|...
T Consensus 166 ~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y--~C~a~n~~~~~~ 205 (210)
T 3d9a_H 166 FPAVLQSDLYTLSSSVTVPSSTWPS-ETV--TCNVAHPASSTK 205 (210)
T ss_dssp CCCEEETTEEEEEEEEEEEGGGTTT-SCC--EEEEEEGGGTEE
T ss_pred cCCccCCCcEEEEEEEEEcHHHcCC-CcE--EEEEEeCCCCcc
Confidence 0 00111 11347777766656 999 999999998643
No 348
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.49 E-value=3.6e-12 Score=93.09 Aligned_cols=168 Identities=15% Similarity=0.174 Sum_probs=96.9
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~ 127 (261)
+.+..|+.++|.|.+.+.+. ...+.|++...+.... ....++... .....|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 10 GVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 55779999999999987652 2379999864321110 011233322 23568999999999
Q ss_pred cCeEEEEEEEcCCc----eEEeeEEEEEEeCC-CCCCCCcceEE----eecCCeEEEEeecCCCCCCCeE-EEEEEE-eC
Q psy11549 128 DYGTLSCAAQNAIG----TQVTPCLYQVVLAG-KPQPPQNCSVR----NETTSSVHISCTPGYDGGLPQT-FTLELY-SA 196 (261)
Q Consensus 128 d~g~y~C~~~~~~~----~~~~~~~~~v~~~~-~p~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~-~~ 196 (261)
|+|.|.|.+.+..+ .........+.|.. ++.+|...... ...|..++|.|.+ .+..|.. .+.|++ +.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~g 167 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLA--QDFLPDSITFSWKYKNN 167 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEE--EEEBSSCCEEEEEETTS
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEE--EEEeCCCeEEEeEccCC
Confidence 99999999998642 11111122344442 33444332221 1358899999997 4443433 334444 32
Q ss_pred CccceeE---EEecC----CCCcEEEcCCCC--CCccEEEEEEEEEcCCCcCC
Q psy11549 197 SDLNLLV---NLTNL----DTPAFTLEDLGL--DGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 197 ~~~~~~~---~~~~~----~~~~~~i~~~~l--~~~~~Y~~~~~a~N~~G~~~ 240 (261)
....... ..... ....+.|..... .+++.| +|.|.|..|...
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y--~C~v~n~~~~~~ 218 (223)
T 1dee_B 168 SDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHV--VCKVQHPNGNKE 218 (223)
T ss_dssp CBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEE--EEEEECTTCCEE
T ss_pred CccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEE--EEEEEeCCCCCc
Confidence 2211100 00000 113467766444 668999 999999998653
No 349
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.49 E-value=9.1e-13 Score=99.70 Aligned_cols=164 Identities=15% Similarity=0.160 Sum_probs=94.6
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----cC------------CceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----VG------------SERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----~~------------~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.. +...+.|++...+.... .. ..++.. ......|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (280)
T 3fku_X 10 EVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSE 89 (280)
T ss_dssp CEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCST
T ss_pred EEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 5678999999999998752 22379998743221110 00 012221 233458999999999
Q ss_pred cCeEEEEEEEcC---------CceEEeeEEEEEEe-------------CCCCCCCCcceEEeecCCeEEEEeecCCCCCC
Q psy11549 128 DYGTLSCAAQNA---------IGTQVTPCLYQVVL-------------AGKPQPPQNCSVRNETTSSVHISCTPGYDGGL 185 (261)
Q Consensus 128 d~g~y~C~~~~~---------~~~~~~~~~~~v~~-------------~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~ 185 (261)
|+|.|+|.+.+. .........+.|.. ..+|...+...+....|+.++|.|.. .+..
T Consensus 90 DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~v~~G~~v~L~C~~--~~~~ 167 (280)
T 3fku_X 90 DTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPSVSKGLRQTATLTCTG--NSNN 167 (280)
T ss_dssp TCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSEEEECTTCCEEEEEEC--CCCC
T ss_pred hCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCcEEEecCCCEEEEEEe--cCCC
Confidence 999999999986 11112222333322 01222111112455679999999997 3312
Q ss_pred C-eEEEEEEEeC-Cccce---------------eEEE-ecCCCCcEEEcCCCCCCccEEEEEEEEEcCC
Q psy11549 186 P-QTFTLELYSA-SDLNL---------------LVNL-TNLDTPAFTLEDLGLDGTVLMRVVISGVNAK 236 (261)
Q Consensus 186 p-~~~~~~~~~~-~~~~~---------------~~~~-~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~ 236 (261)
+ ..+..||+.. +.... .+.. .......|+|.+++.+|.|.| .|.+.|..
T Consensus 168 ~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y--~C~~~~~~ 234 (280)
T 3fku_X 168 VGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADY--YCSTWDSS 234 (280)
T ss_dssp CCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEE--EEEEEETT
T ss_pred CCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEE--EEEEecCC
Confidence 2 2234445432 21111 1111 111223599999999999999 88888865
No 350
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.49 E-value=8.3e-14 Score=103.31 Aligned_cols=118 Identities=15% Similarity=0.145 Sum_probs=74.9
Q ss_pred eEEEccCCCCCCEeEEEEEEeCC---CcceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeCCC-Cc
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTK---GEATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEADPP-AR 90 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~---~~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~ 90 (261)
+|.|.+++.+|+|.|+|.+.+.. .......+.|.|.. +|.+.........+..|+.++|.|.+.+.++ +.
T Consensus 77 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~ 156 (245)
T 4ei6_B 77 TLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 156 (245)
T ss_dssp EEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCe
Confidence 89999999999999999998532 22223456777763 3332211111012345899999999998554 44
Q ss_pred eeEEEEcCCccccccCCceEEe---------CCc----eeEEEEecCCCCc-CeEEEEEEEcCCc
Q psy11549 91 SFKWKFNNSGETLDVGSERFSS---------GSR----GSMLRYTPVTELD-YGTLSCAAQNAIG 141 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~---------~~~----~~~l~i~~~~~~d-~g~y~C~~~~~~~ 141 (261)
.+.|++++.. +.... .... .+. .+.|.|.....+| .|.|+|.+.+...
T Consensus 157 ~v~W~~~g~~--l~~~~-~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 157 ELSWWVNGKE--VHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EEEEEETTEE--ECTTE-EECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEEEEECCEE--CCCCc-ccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 8999997642 21111 1100 011 1347788777777 8999999998643
No 351
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.49 E-value=5.2e-13 Score=85.78 Aligned_cols=94 Identities=24% Similarity=0.354 Sum_probs=67.4
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEE--eCCceeEEEEecCCCCcCeEEEE
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFS--SGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
.+|.+...... ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.. ..++. ..+....|.|.++..+|+|.|+|
T Consensus 12 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~i~W~~~~~~--~~~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 86 (107)
T 3irg_B 12 SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPP-VVVWEKGGQQ--LAA-SERLSFPADGAEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEEEEESCC-EEEEEETTEE--CCC-CSSEECCEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCeeEcCCcc-EEEeCCCeEEEEEEEeecCCC-EEEEEECCeE--CCC-CCcEEEEeCCCEEEEEEccCCHHhCEEEEE
Confidence 45666554444 778899999999999999888 8999997642 211 22222 23444579999999999999999
Q ss_pred EEEcCCceEEeeEEEEEEeCCCC
Q psy11549 135 AAQNAIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~~v~~~~~p 157 (261)
.+.|..|..... +.+.+..+|
T Consensus 87 ~a~n~~g~~~~~--~~l~V~~~P 107 (107)
T 3irg_B 87 RARNAAGEAYAA--AAVTVLEPP 107 (107)
T ss_dssp EEEETTEEEEEE--EEEEEEC--
T ss_pred EEEcCCCcEEEE--EEEEEEcCC
Confidence 999998887664 444444443
No 352
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.49 E-value=2.3e-12 Score=92.22 Aligned_cols=156 Identities=15% Similarity=0.135 Sum_probs=93.8
Q ss_pred EEeeCCCcEEEEEEEeeCCCCc-eeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 69 VGASRSESVDIHCAVEADPPAR-SFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
+.+..|++++|.|.+ +.|.|. .|.|++.+.. + .+.........|.|.+++.+|.|.|.|.+.+..+....
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~----l--~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~-- 87 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTS----L--GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQH-- 87 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTT----T--CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEE--
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccc----c--CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEE--
Confidence 678899999999999 776653 7999875421 1 12222344568999999999999999999998776555
Q ss_pred EEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCe----EEEEEEEeCCccc-eeE---EEe-------cCCCCc
Q psy11549 148 LYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ----TFTLELYSASDLN-LLV---NLT-------NLDTPA 212 (261)
Q Consensus 148 ~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~----~~~~~~~~~~~~~-~~~---~~~-------~~~~~~ 212 (261)
.+.|.|..+|..+.........++.. |.|.+ .+..|. .-+.|+++..... ... ... ......
T Consensus 88 ~~~ltV~~~P~~~~i~~~~~~~g~~~-l~C~a--~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 164 (210)
T 1gsm_A 88 TVQLLVYAFPNQLTVSPAALVPGDPE-VACTA--HKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVL 164 (210)
T ss_dssp EEEEEEEBCCSEEEEESSSBCTTCCE-EEEEE--EEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCC
T ss_pred EEEEEEEecCCCcEEccceEEeCCce-EEEEe--CCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceE
Confidence 55555656665322100012346677 99997 444452 2233444432221 111 110 012234
Q ss_pred EEEc------CCCCCCccEEEEEEEEEcCCCc
Q psy11549 213 FTLE------DLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 213 ~~i~------~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
+.++ ..+-.+++.| +|.|.+.+=.
T Consensus 165 ~~vts~~~~~~~~~D~~~~~--tC~a~~~L~~ 194 (210)
T 1gsm_A 165 FRVTERWRLPPLGTPVPPAL--YCQATMRLPG 194 (210)
T ss_dssp EEEEEEEECCCCCSSCCSEE--EEEEEEEETT
T ss_pred EEEEEEEeecCCcccCCceE--EEEEEeeCCC
Confidence 5543 3234555788 9999998843
No 353
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.49 E-value=3.6e-13 Score=98.61 Aligned_cols=163 Identities=12% Similarity=0.102 Sum_probs=94.7
Q ss_pred EEeeCCCcEEEEEEEeeCC--CCceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADP--PARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~--~~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~ 126 (261)
+.+..|++++|.|.+.+.+ .+ .+.|++...+.... ....++... .....|.|.++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 10 GLVKAGGSLILSCGVSNFRISAH-TMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp EEEETTCCEEEEEEEESSCGGGS-CEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eEecCCCCEEEEEEecCcccCCc-eEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 5678999999999998765 34 79999864221110 011233322 3356899999999
Q ss_pred CcCeEEEEEEEcCCc-----e---EEeeEEEEEEeCCCCCCCCcceEE----eecCCeEEEEeecCCCCCCCeE-EEEEE
Q psy11549 127 LDYGTLSCAAQNAIG-----T---QVTPCLYQVVLAGKPQPPQNCSVR----NETTSSVHISCTPGYDGGLPQT-FTLEL 193 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~-----~---~~~~~~~~v~~~~~p~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p~~-~~~~~ 193 (261)
+|+|.|.|.+.+..+ . ......+.|.. .++.+|...... ...|+.++|.|.+ .+..|.. .+.|+
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~ 165 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP-ASTKGPSVFPLAPSSKSTSGGTAALGCLV--KDYFPEPVTVSWN 165 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEES-CSCBCCEEEEECCCTTCCCCCEEEEEEEE--EEEBSSCCEEECC
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEeccc-CCCcCCeEEEecccccccCCCcEEEEEEE--EeEECCCeEEEEe
Confidence 999999999998754 1 11223444443 122333221111 1358999999997 3443432 33333
Q ss_pred EeCCccc-eeE-EEecCC-----CCcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 194 YSASDLN-LLV-NLTNLD-----TPAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 194 ~~~~~~~-~~~-~~~~~~-----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
+...... ... ...... ...+.|..+...+ |.| +|.|.|..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y--~C~a~n~~~~ 214 (225)
T 1op3_H 166 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSN 214 (225)
T ss_dssp TTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCC--CEEEEEGGGT
T ss_pred cCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcE--EEEEEcCCCC
Confidence 3332211 011 111111 1246787766667 999 9999997753
No 354
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=2.3e-13 Score=100.76 Aligned_cols=124 Identities=16% Similarity=0.198 Sum_probs=76.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC-c-----ceeeeEEEEEEee-------ceeecCceeEEEeeCCCcEEEEEEEeeC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG-E-----ATSNQLKLRVKYA-------PICKSDRIVIVGASRSESVDIHCAVEAD 86 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~-~-----~~s~~~~l~V~~~-------p~~~~~~~~~~~~~~g~~~~l~C~~~~~ 86 (261)
.+|.|.+++.+|+|.|+|.+.+... . .....+.|.|... |...........+..|+.++|.|.+.+.
T Consensus 80 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~ 159 (242)
T 1hxm_B 80 STLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKF 159 (242)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeE
Confidence 4899999999999999999987631 1 1123467888753 2221111111224469999999999987
Q ss_pred -CCCceeEEEEcCCccccccC-CceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 87 -PPARSFKWKFNNSGETLDVG-SERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 87 -~~~~~~~W~~~~~~~~~~~~-~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
|.+..+.|++++........ .......+ ..+.|.|..... + |.|+|.+.|..+....
T Consensus 160 ~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~ 221 (242)
T 1hxm_B 160 FPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGV 221 (242)
T ss_dssp SSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGS
T ss_pred ECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCc
Confidence 43458999998741111110 01111111 123677876654 4 9999999998776544
No 355
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.48 E-value=7.3e-14 Score=103.66 Aligned_cols=119 Identities=16% Similarity=0.175 Sum_probs=76.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC---cceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeCCCC-c
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG---EATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEADPPA-R 90 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~---~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~ 90 (261)
+|.|.+++.+|+|.|+|.+.+..+ ......+.|.|.. +|.+.........+..|+.++|.|.+.+.+++ .
T Consensus 78 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~ 157 (246)
T 4dzb_B 78 TLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 157 (246)
T ss_dssp EEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCce
Confidence 899999999999999999987643 1223445677763 33322111111123459999999999987653 4
Q ss_pred eeEEEEcCCccccccCCceEEe---------CCc----eeEEEEecCCCCc-CeEEEEEEEcCCce
Q psy11549 91 SFKWKFNNSGETLDVGSERFSS---------GSR----GSMLRYTPVTELD-YGTLSCAAQNAIGT 142 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~~---------~~~----~~~l~i~~~~~~d-~g~y~C~~~~~~~~ 142 (261)
.+.|++++.. +.... .... .+. .+.|.|.....+| .|.|+|.|.+....
T Consensus 158 ~v~W~k~g~~--l~~~~-~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 158 ELSWWVNGKE--VHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EEEEEETTEE--ECTTE-EECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEEECCEE--CCCCc-ccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 8999997642 21111 1000 011 1247788777777 99999999987544
No 356
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=3.5e-13 Score=85.35 Aligned_cols=89 Identities=20% Similarity=0.319 Sum_probs=66.4
Q ss_pred EEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEE
Q psy11549 55 VKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 55 V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
+..+|.+...+.. ..+..|+.+.|.|.+.+.|.| .+.|++++.. +... ..........|.|.++..+|+|.|+|
T Consensus 8 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~v~W~~~g~~--~~~~--~~~~~~~~~~L~i~~v~~~D~G~Y~C 81 (99)
T 2yr3_A 8 MEVAPSFSSVLKD-CAVIEGQDFVLQCSVRGTPVP-RITWLLNGQP--IQYA--RSTCEAGVAELHIQDALPEDHGTYTC 81 (99)
T ss_dssp CCEEEEEEECCCC-EEECTTCCEEEECEEEEESCC-CCEEEESSSB--CSSC--CCEEETTEEEEEECSCCTTCCBCEEE
T ss_pred cccCCceeecCCC-CEEeCCCeEEEEEEEeeeCCC-eEEEEECCEE--Cccc--ceEeeCCeEEEEECCCChhhCEEEEE
Confidence 4456666655444 678899999999999999888 8999998743 2111 22233345689999999999999999
Q ss_pred EEEcCCceEEeeEEE
Q psy11549 135 AAQNAIGTQVTPCLY 149 (261)
Q Consensus 135 ~~~~~~~~~~~~~~~ 149 (261)
.|.|..|.......+
T Consensus 82 ~a~N~~g~~~~~~~l 96 (99)
T 2yr3_A 82 LAENALGQVSCSAWV 96 (99)
T ss_dssp EEECSSCEEEEECCE
T ss_pred EEEECCCeEEEEEEE
Confidence 999999887664333
No 357
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.47 E-value=7.4e-14 Score=103.59 Aligned_cols=119 Identities=16% Similarity=0.114 Sum_probs=74.8
Q ss_pred eEEEccCCCCCCEeEEEEEEeCC-----CcceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeCCC-
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTK-----GEATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEADPP- 88 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~-----~~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 88 (261)
+|.|.+++.+|+|.|+|.+.+.. .......+.|.|.. +|.+.........+..|+.+.|.|.+.+.++
T Consensus 75 sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~ 154 (245)
T 3nfj_J 75 ILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPD 154 (245)
T ss_dssp EEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSS
T ss_pred EEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCC
Confidence 79999999999999999999832 22223445777765 3333211111011334899999999998544
Q ss_pred CceeEEEEcCCccccccCCceEEe---------CCc----eeEEEEecCCCCc-CeEEEEEEEcCCce
Q psy11549 89 ARSFKWKFNNSGETLDVGSERFSS---------GSR----GSMLRYTPVTELD-YGTLSCAAQNAIGT 142 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~~~~~---------~~~----~~~l~i~~~~~~d-~g~y~C~~~~~~~~ 142 (261)
+..+.|++++.. +.... .... .+. .+.|.|.....+| .|.|+|.+.+....
T Consensus 155 ~~~v~W~k~g~~--l~~~~-~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~ 219 (245)
T 3nfj_J 155 HVELSWWVNGKE--VHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp CEEEEEEETTEE--ECTTE-EECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred CEEEEEEECCEE--CCCCc-ccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCC
Confidence 447999998742 21111 1000 111 2367777776667 66999999987543
No 358
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.46 E-value=7.1e-13 Score=91.06 Aligned_cols=97 Identities=16% Similarity=0.254 Sum_probs=71.9
Q ss_pred EEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEe---CCceeEEEEecCCCC
Q psy11549 51 LKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSS---GSRGSMLRYTPVTEL 127 (261)
Q Consensus 51 ~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~---~~~~~~l~i~~~~~~ 127 (261)
+.+.+..+|.+...... +.+..|+.+.|.|.+.+.|.+ .+.|++++.. +.. ..++.. ......|.|.++...
T Consensus 34 ~~~~v~~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p-~v~W~k~g~~--~~~-~~~~~~~~~~~~~~~L~I~~v~~~ 108 (154)
T 1fhg_A 34 AEEKPHVKPYFTKTILD-MEVVEGSAARFDCKVEGYPDP-EVMWFKDDNP--VKE-SRHFQIDYDEEGNCSLTISEVCGD 108 (154)
T ss_dssp CCCCCCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCC-EEEEEETTEE--CCC-SSSEEEEECTTCEEEEEESSCCGG
T ss_pred hcccCCCCCeEEccCCc-EEEeCCCeEEEEEEEEEecCC-EEEEEECCEE--CCC-CCcEEEEECCCCeEEEEECCCChh
Confidence 34555567777765554 778899999999999999988 8999998742 222 222222 233468999999999
Q ss_pred cCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 128 DYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
|+|.|+|.|.|..|.......+.|.
T Consensus 109 D~G~Y~C~a~N~~G~~~~~~~l~V~ 133 (154)
T 1fhg_A 109 DDAKYTCKAVNSLGEATCTAELLVE 133 (154)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cCEEEEEEEEECCCeEEEEEEEEEe
Confidence 9999999999999987775444444
No 359
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.46 E-value=5.9e-12 Score=93.15 Aligned_cols=170 Identities=16% Similarity=0.110 Sum_probs=97.1
Q ss_pred EEeeCCCcEEEEEEEeeC--CCCceeEEEEcCCccccc--c--------------CCceEEeC----CceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEAD--PPARSFKWKFNNSGETLD--V--------------GSERFSSG----SRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~--~~~~~~~W~~~~~~~~~~--~--------------~~~~~~~~----~~~~~l~i~~~~~ 126 (261)
+.+..|++++|.|.+.+. +.+ .+.|++...+.... . ...++... .....|.|.++..
T Consensus 11 v~~~~G~~v~L~C~~~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (242)
T 1hxm_B 11 STKTLSKTARLECVVSGITISAT-SVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEK 89 (242)
T ss_dssp EEEETTCCEEEEEEEESSCTTTS-CEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCG
T ss_pred EEecCCCcEEEEEEeCCccccCc-eEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCc
Confidence 678899999999999875 334 79999854221110 0 12333322 1356899999999
Q ss_pred CcCeEEEEEEEcCCc-----e--EEeeEEEEEEeCC-----CCCC----CCcceEEeecCCeEEEEeecCCCCCCCe-EE
Q psy11549 127 LDYGTLSCAAQNAIG-----T--QVTPCLYQVVLAG-----KPQP----PQNCSVRNETTSSVHISCTPGYDGGLPQ-TF 189 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~-----~--~~~~~~~~v~~~~-----~p~~----p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~ 189 (261)
+|+|.|.|.+.+... . ......+.|.... +|.+ |.... ...|+.++|.|.+ .+..|. ..
T Consensus 90 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~--~~~g~~v~L~C~~--~g~~P~~~~ 165 (242)
T 1hxm_B 90 QDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAE--TKLQKAGTYLCLL--EKFFPDVIK 165 (242)
T ss_dssp GGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGG--GGSSSCEEEEEEE--EEESSCCEE
T ss_pred ccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhh--cccCCCceEEEEE--eeEECCCeE
Confidence 999999999987521 1 1122344444321 1211 11111 1248899999997 444453 33
Q ss_pred EEEEEeCC-cc-ceeE-EEecCCC-----CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 190 TLELYSAS-DL-NLLV-NLTNLDT-----PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 190 ~~~~~~~~-~~-~~~~-~~~~~~~-----~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
+.|++... .. .... ....... ..+.|.. ....|.| +|.|.|..|....+..+.+
T Consensus 166 v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~--~~~~g~y--~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 166 IHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPE--KSLDKEH--RCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECT--GGGGSCE--EEEEEETTSGGGSCEEEEE
T ss_pred EEEEcCCCEeecCccccceecCCCcEEEEEEEEEcc--ccCCCEE--EEEEEeCCCCCCceeEeec
Confidence 44445443 11 1010 0111111 3567766 3324889 9999999997765554443
No 360
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.46 E-value=1.4e-12 Score=94.66 Aligned_cols=169 Identities=16% Similarity=0.179 Sum_probs=89.1
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc-c--------------CCceEE--eCCceeEEEEecCCCCcCe
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD-V--------------GSERFS--SGSRGSMLRYTPVTELDYG 130 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~-~--------------~~~~~~--~~~~~~~l~i~~~~~~d~g 130 (261)
+.+.+|++++|.|.+.+.+ ....+.|++...+.... + ...++. .......|.|.++..+|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (215)
T 3nl4_H 9 RLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTA 88 (215)
T ss_dssp CEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCE
T ss_pred EEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCE
Confidence 5577999999999998643 22379999743221111 0 012222 2344557999999999999
Q ss_pred EEEEEEEcCCce----EEeeEEEEEEeCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccce
Q psy11549 131 TLSCAAQNAIGT----QVTPCLYQVVLAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNL 201 (261)
Q Consensus 131 ~y~C~~~~~~~~----~~~~~~~~v~~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~ 201 (261)
.|.|.+.+..+. ......+.|.. .++.+|..... ....|..++|.|.+ .+..|.. ...|+++......
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~l~C~~--~~~~p~~~~v~W~~~g~~~~~ 165 (215)
T 3nl4_H 89 TYFCVRKYGSEWGGDLWGPGTLVTVSS-GQPKAPSVFPLAPCCGDTPSSTVTLGCLV--KGYLPEPVTVTWNSGTLTNGV 165 (215)
T ss_dssp EEEEEEECSSSSCEEEECCCEEEEECS-SCCBCCEEEEECCCTTCCC--CEEEEEEE--EEEBSSCCEEEEGGGTBCTTE
T ss_pred EEEEEEecCCCccceEEcCCEEEEEeC-CCcCCCEEEEecCCccccCCCcEEEEEEE--eeeeCCCeEEEEeeCCEECCe
Confidence 999999987542 22222333322 22233321111 11348899999997 3333422 2234443322111
Q ss_pred eE-EEecCCCCcEEE---cCCCCCCccEEEEEEEEEcCCCcCCcee
Q psy11549 202 LV-NLTNLDTPAFTL---EDLGLDGTVLMRVVISGVNAKGRSLPVI 243 (261)
Q Consensus 202 ~~-~~~~~~~~~~~i---~~~~l~~~~~Y~~~~~a~N~~G~~~~s~ 243 (261)
.. .........+.+ ..+...+ |.| +|.|.|..|......
T Consensus 166 ~~~~~~~~~~g~~~~~s~l~v~~~d-g~y--tC~v~~~~~~~~~~~ 208 (215)
T 3nl4_H 166 RTFPSVRQSSGLYSLSSVVSVTSSS-QPV--TCNVAHPATNTKVDK 208 (215)
T ss_dssp EECCCEECTTSCEEEEEEEEECC----CC--EEEEEEGGGTEEEEE
T ss_pred EecCceECCCCCEEEEEEEEEeccC-CEE--EEEEEeCCCCcceEE
Confidence 11 111122334444 2333456 888 999999998554333
No 361
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.46 E-value=3.1e-13 Score=98.26 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=74.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCc--ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGE--ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~--~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.+..+.
T Consensus 79 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~g~~P~p~~v~ 157 (215)
T 1c5d_H 79 FLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPG-CGDTTSSTVTLGCLVKGYFPEPVTVT 157 (215)
T ss_dssp EEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCC-SSCCCCSSEEEEEEEEEEBSSCCEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCC-hhhccCCcEEEEEEEeeeEcCCcEEE
Confidence 8999999999999999999886422 112346788863 2333211111 124579999999999987 5555899
Q ss_pred EEEcCCccccccCCceEEeCCceeEE--EEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 94 WKFNNSGETLDVGSERFSSGSRGSML--RYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 94 W~~~~~~~~~~~~~~~~~~~~~~~~l--~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
|++++..... .............+ .+.....++ |.|+|.|.|..+....
T Consensus 158 W~~~g~~~~~--~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 158 WNSGALSSDV--HTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp EGGGTTCCSC--CBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred EccCCccCce--EecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 9987642111 11111111121111 123333355 9999999998776543
No 362
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.46 E-value=4.2e-13 Score=98.71 Aligned_cols=122 Identities=11% Similarity=0.122 Sum_probs=74.4
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC-------cceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG-------EATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP- 88 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~-------~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 88 (261)
+|.|.+++.+|+|.|.|.+.+..+ ........|.|. .+|.+...... ..+..|+.++|.|.+.+.++
T Consensus 84 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~~~~P~ 162 (232)
T 3qhz_H 84 VLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPE 162 (232)
T ss_dssp EEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC--------CEEEEEEEEEEEBSS
T ss_pred EEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEeccc-ccccCCCcEEEEEEEeeEeCC
Confidence 699999999999999999987631 112334567775 23444311111 23456999999999998654
Q ss_pred CceeEEEEcCCccccccCCceEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 89 ARSFKWKFNNSGETLDVGSERFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+..+.|++++........ ......+ ..+.|.|......| |.|+|.|.+..+....
T Consensus 163 ~~~v~W~~~g~~~~~~~~-~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~ 221 (232)
T 3qhz_H 163 PVTVSWNSGALTSGVHTF-PAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 221 (232)
T ss_dssp CCEEEEGGGTBCTTEEEC-CCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEE
T ss_pred CeEEEEEECCEecceeec-cceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccE
Confidence 557889887632111100 0011111 12468888888888 9999999998765544
No 363
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.46 E-value=5.6e-13 Score=99.74 Aligned_cols=120 Identities=16% Similarity=0.230 Sum_probs=77.5
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc--eeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCcee
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA--TSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD-PPARSF 92 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~--~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~~ 92 (261)
.+|.|.+++.+|+|.|+|.+.+..+.. ....+.|.|.. +|.+...... ..+..|+.++|.|.+.+. |.+..+
T Consensus 85 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~v~~g~~v~L~C~~~g~~P~~i~v 163 (261)
T 2xqy_G 85 VYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLGCLVKGYFPEPVTL 163 (261)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCC-CC--CCSEEEEEEEEEEEBSSCCEE
T ss_pred EEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCC-ccccCCCcEEEEEEEEeEeCCCCEE
Confidence 489999999999999999998864311 12345777764 3433321111 124579999999999986 555589
Q ss_pred EEEEcCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 93 KWKFNNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 93 ~W~~~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
.|++++......... .....+ ..+.|.|.....+| |.|+|.|.|....
T Consensus 164 ~W~k~g~~~~~~~~~-~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 164 TWNSGSLSSGVHTFP-AVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp EEGGGTCCTTEEECC-CEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred EEecCCCcCceEecC-ceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 999876432111111 111111 13468898888888 9999999986544
No 364
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.46 E-value=6.3e-13 Score=85.57 Aligned_cols=92 Identities=23% Similarity=0.264 Sum_probs=71.0
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcccee-EEEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLL-VNLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
.+|.+|..+.+. ...+.+.|.|.++.+++.|+. |.+.|+........ ..........++|.+ |.++..|+|++.|
T Consensus 7 ~~P~pP~~~~~~-~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~--L~p~t~Y~frV~A 83 (114)
T 2kbg_A 7 REPSPPSIHGQP-SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEH--LQWTMGYEVQITA 83 (114)
T ss_dssp CCCCSCCEECCB-CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECC--CCTTCCEEEEEEE
T ss_pred CCccCCcccccc-cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcC--CCCCCEEEEEEEE
Confidence 567777655443 579999999998888999976 99999886443211 122344567899999 9999999999999
Q ss_pred EcCCCcCCceeeeeeee
Q psy11549 233 VNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~ 249 (261)
.|.+|.|++|.....+.
T Consensus 84 ~N~~G~s~pS~~~~~T~ 100 (114)
T 2kbg_A 84 ANRLGYSEPTVYEFSMP 100 (114)
T ss_dssp ECTTSCEEEEEEEECCC
T ss_pred EeCCcCcCCcCCEEEcC
Confidence 99999999998654443
No 365
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.45 E-value=1.4e-13 Score=101.72 Aligned_cols=120 Identities=13% Similarity=0.174 Sum_probs=75.1
Q ss_pred eEEEccCCCCCCEeEEEEEEeC--CCcceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCce
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINT--KGEATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEAD-PPARS 91 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~--~~~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~~ 91 (261)
+|.|.+++.+|+|.|+|.+.+. ........+.|.|.. +|.+.........+..|+.++|.|.+.+. |.+..
T Consensus 76 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~ 155 (240)
T 3q5y_A 76 EMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVE 155 (240)
T ss_dssp EEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeE
Confidence 7999999999999999999733 222223445677763 33322111110123458999999999984 44557
Q ss_pred eEEEEcCCccccccCCce----EEeCCc----eeEEEEecCCCCc-CeEEEEEEEcCCce
Q psy11549 92 FKWKFNNSGETLDVGSER----FSSGSR----GSMLRYTPVTELD-YGTLSCAAQNAIGT 142 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~~~----~~~~~~----~~~l~i~~~~~~d-~g~y~C~~~~~~~~ 142 (261)
+.|++++.. +...... ....+. .+.|.|.....+| .|.|+|.|.+....
T Consensus 156 v~W~~~g~~--l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 156 LSWWVNGKE--VHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp EEEEETTEE--ECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred EEEEECCEE--CcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 999998742 2111100 111111 2348888888888 67999999986543
No 366
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.45 E-value=1.2e-12 Score=83.05 Aligned_cols=81 Identities=15% Similarity=0.287 Sum_probs=60.4
Q ss_pred EEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 68 IVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 68 ~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
.+.+..|+.+.|.|.+.+.|.+ .+.|++++...........+........|.|.++..+|+|.|+|.|.|..|......
T Consensus 17 ~~~v~~G~~v~l~C~~~g~p~p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 17 LHAVPAANTVKFRCPAGGNPMP-TMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp EEEECTTCCEEEECCEEEESCC-EEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEEEccccCCC-EEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 4778899999999999999888 799999874322211111123333345799999999999999999999998876644
Q ss_pred EE
Q psy11549 148 LY 149 (261)
Q Consensus 148 ~~ 149 (261)
.+
T Consensus 96 ~l 97 (100)
T 3caf_A 96 HL 97 (100)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 367
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.45 E-value=4e-12 Score=80.48 Aligned_cols=91 Identities=14% Similarity=0.244 Sum_probs=66.0
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceE--EeCCceeEEEEecCCCCcCeEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERF--SSGSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~--~~~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+|.+...+.. +.+..|+.+.|.|.+.+.|.+ .+.|++++..... ....++ ........|.|.++..+|+|.|+|.
T Consensus 5 pP~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p-~v~W~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 81 (100)
T 3irg_A 5 PPKIEALPSD-ISIDEGKVLTVACAFTGEPTP-EVTWSCGGRKIHS-QEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEECCCCSE-EEEETTSEEEEEEEEEEESCC-EEEEEETTEECCT-TGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCeeecCCCc-EEEcCCCcEEEEEEEEEcCCC-ceEEEECCEEeec-CCCCEEEEEecCCEEEEEEeecCcccCEEEEEE
Confidence 4555444443 778899999999999999888 8999997642211 122232 3344456899999999999999999
Q ss_pred EEcCCceEEeeEEEEE
Q psy11549 136 AQNAIGTQVTPCLYQV 151 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v 151 (261)
+.|..|.......+.|
T Consensus 82 a~n~~g~~~~~~~l~V 97 (100)
T 3irg_A 82 LGNEFGSDSATVNIHI 97 (100)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEE
Confidence 9999988766444443
No 368
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.45 E-value=2e-13 Score=101.87 Aligned_cols=120 Identities=11% Similarity=0.123 Sum_probs=65.4
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCc------------ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGE------------ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAV 83 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~------------~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~ 83 (261)
.+|.|.+++.+|+|.|+|.+.+..+. .....+.|.|.. +|.+...... ..+..|+.++|.|.+
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~-~~~~~g~~v~L~C~~ 157 (257)
T 3bn9_D 79 LYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLV 157 (257)
T ss_dssp EEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC------------CCCEE
T ss_pred EEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCc-ccccCCCcEEEEEEE
Confidence 38999999999999999999887641 112345788864 3544332222 234679999999999
Q ss_pred eeC-CCCceeEEEEcCCccccccCCceEEeCCc----eeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 84 EAD-PPARSFKWKFNNSGETLDVGSERFSSGSR----GSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 84 ~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
.+. |.+..+.|++++....... .......+. .+.|.|.+...+| |.|+|.|.|....
T Consensus 158 ~g~~P~pi~v~W~k~g~~~~~~~-~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~ 219 (257)
T 3bn9_D 158 KDYFPEPVTVSWNSGALTSGVHT-FPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 219 (257)
T ss_dssp EEEBSSCCEEEETTTTCCSSCEE-CCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGT
T ss_pred eeEECCCcEEEEeeCCCcCCcEe-cCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCC
Confidence 986 5555899998764311110 001111111 2356777777677 9999999996543
No 369
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.45 E-value=7e-14 Score=102.89 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=79.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-----------cCCceEEe--CCceeEEEEecCCCCcCeEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-----------VGSERFSS--GSRGSMLRYTPVTELDYGTLSCA 135 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-----------~~~~~~~~--~~~~~~l~i~~~~~~d~g~y~C~ 135 (261)
+.+..|++++|.|.+.+.+.+ .+.|++...+.... ....++.. ......|.|.++..+|+|.|.|.
T Consensus 33 ~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 111 (233)
T 3bqu_C 33 LSMSIGEKVTIRCITSTDIDD-DMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCL 111 (233)
T ss_dssp C-------CCEEEEEEEEESS-CEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEE
T ss_pred EEEecCCCEEEEEecCCcCCC-eEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEE
Confidence 457799999999999987766 79999864322110 00112221 22344799999999999999999
Q ss_pred EEcCCceEEeeEEEEEEeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCe-EEEEEEEeCCcccee-EE---E
Q psy11549 136 AQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLL-VN---L 205 (261)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~-~~---~ 205 (261)
+.+..+..... ...+.+...+.+|. +.+.. ..|+.++|.|.+ .+..|. ..+.|+++....... .. .
T Consensus 112 ~~~~~~~~~~~-~~~l~V~~~~~~p~-v~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~ 187 (233)
T 3bqu_C 112 QSDNLPYTFGG-GTNLEIKRADAAPT-VSIFPPSSEQLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTD 187 (233)
T ss_dssp ECSSSSCCBCC-CCBC---CCCBCCE-EEEECCCHHHHHTTEEEEEEEE--EEEBSSCEEEEEEEC-----CCEEEEECC
T ss_pred EecCCceeecC-CEEEEEeCCCCCCE-EEEeCCCHHhhcCCceEEEEEE--ccccCCceEEEEEECCeeCCCCceEecCC
Confidence 99865432111 11233333322332 12211 248899999997 343443 223444443222111 10 1
Q ss_pred ecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 206 TNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 206 ~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
..... ..+.|..+..+|+|.| +|.|.|.....
T Consensus 188 ~~~~~~~~~~~s~L~i~~~~~~d~g~Y--~C~a~n~~~~~ 225 (233)
T 3bqu_C 188 QDSKDSTYSMSSTLTLTKDEYERHNSY--TCEATHKTSTS 225 (233)
T ss_dssp CCTTTCCEEEEEEEEEEHHHHHTCCCE--EEEEEEC---C
T ss_pred ccCCCCCEEEEEEEEECHHHhCCCCCE--EEEEEeCCCCc
Confidence 11111 2466777556789999 99999986543
No 370
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.45 E-value=6.5e-13 Score=97.42 Aligned_cols=167 Identities=15% Similarity=0.148 Sum_probs=95.6
Q ss_pred EEeeCCCcEEEEEEEeeCCC-C--ceeEEEEcCCccccc---------------cCCceEEeC----CceeEEEEecCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-A--RSFKWKFNNSGETLD---------------VGSERFSSG----SRGSMLRYTPVTE 126 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~--~~~~W~~~~~~~~~~---------------~~~~~~~~~----~~~~~l~i~~~~~ 126 (261)
+.+..|++++|.|.+.+.+. . ..+.|++...+.... ....++... .....|.|.++..
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (228)
T 3bae_H 10 GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDT 89 (228)
T ss_dssp SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCG
T ss_pred eeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCc
Confidence 45779999999999998764 1 389999853221110 012233322 2346899999999
Q ss_pred CcCeEEEEEEEcCCc------e---EEeeEEEEEEeCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EEEE
Q psy11549 127 LDYGTLSCAAQNAIG------T---QVTPCLYQVVLAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FTLE 192 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~------~---~~~~~~~~v~~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~~~ 192 (261)
+|+|.|.|.+.+..| . ......+.|.. .++.+|..... ....|+.++|.|.+ .+..|.. .+.|
T Consensus 90 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~-~~~~~P~i~~~~~~~~~~~g~~~~l~C~~--~g~~P~p~~v~W 166 (228)
T 3bae_H 90 ADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSS-AKTTAPSVYPLAPVCGDTTGSSVTLGCLV--KGYFPEPVTLTW 166 (228)
T ss_dssp GGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECS-CCCBCCEEEEECC-----CCSEEEEEEEE--EEEBSSCCEEEE
T ss_pred ccCEEEEEEEecCCCccccccceeeeCCcEEEEecC-CCCCCCEEEEecccccccCCCCEEEEEEE--ccEeCCCEEEEE
Confidence 999999999998654 1 11222343332 22333322111 12358999999997 3433432 2334
Q ss_pred EEeCCccc-eeE-EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCc
Q psy11549 193 LYSASDLN-LLV-NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLP 241 (261)
Q Consensus 193 ~~~~~~~~-~~~-~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~ 241 (261)
++...... ... ..... ....+.|..+...+ |.| +|.|.|..|....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~Y--tC~~~n~~~~~~~ 218 (228)
T 3bae_H 167 NSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESI--TCNVAHPASSTKV 218 (228)
T ss_dssp GGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCC--EEEEEEGGGTEEE
T ss_pred eeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcE--EEEEEECCCCCCE
Confidence 34332211 111 11111 12357777866655 999 9999999986543
No 371
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.45 E-value=4.5e-12 Score=93.19 Aligned_cols=173 Identities=18% Similarity=0.200 Sum_probs=95.9
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc---------------cCCceEEe----CCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD---------------VGSERFSS----GSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~---------------~~~~~~~~----~~~~~~l~i~~~~~~d 128 (261)
+.+..|++++|.|.+.+.+ ....+.|++...+.... ....++.. ......|.|.++..+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 10 GLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp CEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence 4577999999999998764 22379999854221110 01223332 2335589999999999
Q ss_pred CeEEEEEEEc--CCc----eEEeeEEEEEEeCC-CCCCCCcceEE----eecC-CeEEEEeecCCCCCCCeE-EEEEEE-
Q psy11549 129 YGTLSCAAQN--AIG----TQVTPCLYQVVLAG-KPQPPQNCSVR----NETT-SSVHISCTPGYDGGLPQT-FTLELY- 194 (261)
Q Consensus 129 ~g~y~C~~~~--~~~----~~~~~~~~~v~~~~-~p~~p~~~~v~----~~~~-~~~~l~c~~~~~~~~p~~-~~~~~~- 194 (261)
+|.|.|.+.+ ..+ ....... +.|.. ++.+|...... ...| ..++|.|.+ .+..|.. .+.|++
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~~~~--L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~--~g~~P~p~~v~W~~~ 165 (232)
T 1dn0_B 90 TAVYYCARPPHDTSGHYWNYWGQGTL--VTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLA--QDFLPDSITFSWKYK 165 (232)
T ss_dssp CEEEEEEECSSTTSCSCCSEECCCEE--EEECSSCCBCCEEEEEECC------CCSEEEEEEE--EEEBSSCCEEEEEET
T ss_pred CEEEEEEEecCCcCCchhhhcccceE--EEEccCCCCCCceEEeccccccCCCCCcEEEEEEE--EEEeCCCeEEEEEcC
Confidence 9999999983 211 1112223 44433 33344322111 1246 899999997 3443432 333444
Q ss_pred eCCcccee--E-EEecC----CCCcEEEcCCCC--CCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 195 SASDLNLL--V-NLTNL----DTPAFTLEDLGL--DGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 195 ~~~~~~~~--~-~~~~~----~~~~~~i~~~~l--~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
+....... . ..... ....+.|..... .+.+.| +|.|.|..|.......+.+
T Consensus 166 ~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y--tC~v~n~~~~~~~~~~i~~ 225 (232)
T 1dn0_B 166 NNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHV--VCKVQHPNGNKEKNVPLPV 225 (232)
T ss_dssp TSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEE--EEEEECTTCCEEEEEECCC
T ss_pred CCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeE--EEEEEeCCCCcceeEecCC
Confidence 32211100 0 00000 113567777554 568999 9999999987655544443
No 372
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.44 E-value=1.1e-13 Score=104.10 Aligned_cols=120 Identities=18% Similarity=0.168 Sum_probs=75.3
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC---cceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEee-CCCC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG---EATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEA-DPPA 89 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~---~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~ 89 (261)
.+|.|.+++.+|+|.|+|.+.+... ......+.|.|.. +|.+.........+..|+.++|.|.+.+ .|.+
T Consensus 101 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~ 180 (270)
T 3qib_D 101 CSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 180 (270)
T ss_dssp EEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEEEEEecceeCCC
Confidence 4899999999999999999986432 1223345777765 3332211111012335899999999998 4445
Q ss_pred ceeEEEEcCCccccccCCceEE----------eCCc---eeEEEEecCCCCc-CeEEEEEEEcCCce
Q psy11549 90 RSFKWKFNNSGETLDVGSERFS----------SGSR---GSMLRYTPVTELD-YGTLSCAAQNAIGT 142 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~~~~~~~----------~~~~---~~~l~i~~~~~~d-~g~y~C~~~~~~~~ 142 (261)
..+.|++++.. +.... ... ..+. .+.|.|.....+| .|.|+|.+.+....
T Consensus 181 ~~v~W~k~g~~--l~~~~-~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l~ 244 (270)
T 3qib_D 181 VELSWWVNGKE--VHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 244 (270)
T ss_dssp EEEEEEETTEE--ECTTE-EECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCBC
T ss_pred eEEEEEECCEE--CCCCc-ccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCCC
Confidence 58999997642 21110 000 0111 2356777776666 99999999986543
No 373
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.44 E-value=4.3e-12 Score=92.53 Aligned_cols=165 Identities=16% Similarity=0.178 Sum_probs=94.9
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc------------------cCCceEEe----CCceeEEEEecCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD------------------VGSERFSS----GSRGSMLRYTPVT 125 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~------------------~~~~~~~~----~~~~~~l~i~~~~ 125 (261)
+.+.+|++++|.|.+.+.+ ....+.|++...+.... ....++.. ......|.|.++.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 89 (221)
T 3m8o_H 10 GLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLK 89 (221)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCC
T ss_pred EEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCC
Confidence 5578999999999998753 22389999754321110 01123322 1334579999999
Q ss_pred CCcCeEEEEEEEcCC--ceEEeeEEEEEEeCCCCCCCCcceEEe---ecCCeEEEEeecCCCCCCCe---EEEEEEEeCC
Q psy11549 126 ELDYGTLSCAAQNAI--GTQVTPCLYQVVLAGKPQPPQNCSVRN---ETTSSVHISCTPGYDGGLPQ---TFTLELYSAS 197 (261)
Q Consensus 126 ~~d~g~y~C~~~~~~--~~~~~~~~~~v~~~~~p~~p~~~~v~~---~~~~~~~l~c~~~~~~~~p~---~~~~~~~~~~ 197 (261)
.+|+|.|.|.+.+.. ........+.|.. .++.+|....+.. ..|..++|.|.+ .+..|. .+.| +++..
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~-~~~~~p~v~~~~~~~~~~g~~v~L~C~~--~~~~P~~~~~v~W-~~~g~ 165 (221)
T 3m8o_H 90 SDDTAMYYCVIRGDVYNRQWGQGTLVTVSS-ASPTSPKVFPLSLCSTQPDGNVVIACLV--QGFFPQEPLSVTW-SESGQ 165 (221)
T ss_dssp GGGCEEEEEEEESCTTCCCBBCCEEEEECS-CCCBCCEEEEEECCSCCCTTEEEEEEEE--EEEBSSCSEEEEE-SCCST
T ss_pred HHHCEEEEEEEECCChhheECCCEEEEEec-CCCCCCeEEEecCcccccCCCEEEEEEE--EeeECCCCEEEEE-EECCE
Confidence 999999999999863 1122222333331 2333333221111 358999999997 333443 3443 34332
Q ss_pred ccceeE--EEe-cCC-----CCcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 198 DLNLLV--NLT-NLD-----TPAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 198 ~~~~~~--~~~-~~~-----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
...... ... ... ...+.|......++|.| +|.|.|..|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~y--tC~v~~~~~~~ 213 (221)
T 3m8o_H 166 GVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSV--TCHVKHYTNPS 213 (221)
T ss_dssp TCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEE--EEEEEETTSCC
T ss_pred ECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeE--EEEEEECCCCc
Confidence 221110 001 111 12477887667789999 99999988653
No 374
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.44 E-value=6.6e-13 Score=103.48 Aligned_cols=165 Identities=11% Similarity=0.138 Sum_probs=96.7
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~ 127 (261)
+.+..|+.+.|.|.+.+.+ +...+.|+++..+.... ....++... .....|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (344)
T 1za6_B 10 EVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSE 89 (344)
T ss_dssp EEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence 5678999999999998864 23379999874222110 012233322 34568999999999
Q ss_pred cCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccce-
Q psy11549 128 DYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNL- 201 (261)
Q Consensus 128 d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~- 201 (261)
|+|.|+|.+.+..+.......+.|.. .++.+|..... ....|+.++|.|.+ .+..|. ..+.|+++......
T Consensus 90 D~G~Y~C~~~n~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~k~g~~~~~~ 166 (344)
T 1za6_B 90 DTAVYFCTRSLNMAYWGQGTLVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLV--KDYFPEPVTVSWNSGALTSGVH 166 (344)
T ss_dssp GCEEEEEEETTTTCEECCCEEEEECS-SCCBCCEEEEECCSCTTTSSSEEEEEEEE--EEEBSSCCCEEETTTTBCTTEE
T ss_pred cCEEEEEEEecCcceecCcEEEEEec-CCCCCCeEEEccccccccCCCcEEEEEEE--eeEECCCeEEEEecCCccCcee
Confidence 99999999998654443333443332 22333321111 11468999999997 444343 22333333322110
Q ss_pred eE-EEecCC-----CCcEEEcCCCCCCccEEEEEEEEEcCCCcC
Q psy11549 202 LV-NLTNLD-----TPAFTLEDLGLDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 202 ~~-~~~~~~-----~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~ 239 (261)
.. ...... ...|.|..+..++ |.| +|.|.|..|..
T Consensus 167 ~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y--~C~a~n~~~~~ 207 (344)
T 1za6_B 167 TFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSNT 207 (344)
T ss_dssp ECCCEECTTSCEEEEEEEEEETTHHHH-BCE--EEEEEEGGGTE
T ss_pred ECCCeECCCCCEEEEEEEEEcHHHcCC-CcE--EEEEEeCCCCc
Confidence 01 111111 1257788855556 999 99999998853
No 375
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.44 E-value=1.4e-12 Score=83.15 Aligned_cols=82 Identities=17% Similarity=0.250 Sum_probs=60.6
Q ss_pred eCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCce-EEe-----CCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 72 SRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSER-FSS-----GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 72 ~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~-----~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
..+..+.|.|.+.+.|.| .+.|++++.. +...... ... ......|.|.++..+|+|.|+|.|.|..|....
T Consensus 14 ~~~~~~~~~c~v~G~P~P-~i~W~k~g~~--l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 90 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKP-ALQWFYNGAI--LNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEK 90 (103)
T ss_dssp CCCCEEEEEEEEECSSCC-EEEEEETTEE--ECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred eECcEEEEEEEEEEeCCC-EEEEEECCEE--CCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeE
Confidence 367889999999999999 8999998742 2222211 111 112345999999999999999999999998777
Q ss_pred eEEEEEEeCCCCC
Q psy11549 146 PCLYQVVLAGKPQ 158 (261)
Q Consensus 146 ~~~~~v~~~~~p~ 158 (261)
.+.+.+..+|.
T Consensus 91 --~~~l~V~~~P~ 101 (103)
T 1wwb_X 91 --QISAHFMGWPG 101 (103)
T ss_dssp --EEEECCSCCCC
T ss_pred --EEEEEECCCCC
Confidence 55666666664
No 376
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=3.3e-12 Score=83.50 Aligned_cols=90 Identities=11% Similarity=0.086 Sum_probs=62.0
Q ss_pred EEeeCCCcEEEEEEEeeC---CCCceeEEEEcCCccccc-cCCceEEeCC--------ceeEEEEecCCCCcCeEEEEEE
Q psy11549 69 VGASRSESVDIHCAVEAD---PPARSFKWKFNNSGETLD-VGSERFSSGS--------RGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~---~~~~~~~W~~~~~~~~~~-~~~~~~~~~~--------~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+.+.+|+.++|.|.+.+. |.| .+.|+++.. .... ....++.... ....|.|.++...|+|.|+|+|
T Consensus 17 v~V~eG~~v~L~C~v~g~~~~p~P-~V~W~Kgk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cev 94 (126)
T 2dav_A 17 GTVKVGEDITFIAKVKAEDLLRKP-TIKWFKGKW-MDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEV 94 (126)
T ss_dssp CEEETTCCEEEEEEEECCCSSSCC-EEEEEESSS-CCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEE
T ss_pred eEEeCCCCEEEEEEEeccCCCCCC-cEEEeeCcC-cccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEE
Confidence 678899999999999875 556 899999641 1111 0122222210 2468999999999999999999
Q ss_pred EcCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 137 QNAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
.|..+.......|+|.+. +|..|.
T Consensus 95 sn~~g~~~~~~~L~V~~~-~~~~p~ 118 (126)
T 2dav_A 95 TYKDKFDSCSFDLEVHES-TGTTPN 118 (126)
T ss_dssp ECSSCEEEECCEEEEECC-CCSCCC
T ss_pred EeCCCcEEEEEEEEEEec-CCCCCe
Confidence 999887777555555541 444443
No 377
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.43 E-value=1.3e-13 Score=106.55 Aligned_cols=118 Identities=15% Similarity=0.139 Sum_probs=76.6
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE------eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-Cce
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK------YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARS 91 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~ 91 (261)
.++|.|.+++.+|+|.|+|.|.|..+.. . +.+.|. .+|.+...... .....|+.++|.|.+.+.++ +..
T Consensus 177 ~~~L~I~~~~~~D~G~Y~C~a~n~~~~~-~--~~~~v~~~~~~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~ 252 (323)
T 2wqr_A 177 TSTLPVGTRDWIEGETYQCRVTHPHLPR-A--LMRSTTKTSGPRAAPEVYAFATP-EWPGSRDKRTLACLIQNFMPEDIS 252 (323)
T ss_dssp EEEEECCHHHHHTTCCEEEEEECTTSSS-C--EEEEECCCCSCCBCCEEEEEECC-CCTTCTTEEEEEEEEEEEBSSCCE
T ss_pred EEEEEECHHHccCCCCEEEEEECCCCCC-C--eeeEEEccCCCCCCCEEEEeCCC-hHHhcCCcEEEEEEeeeeeCCCcE
Confidence 3479999999999999999999886432 1 233332 34443321111 11123999999999998544 448
Q ss_pred eEEEEcCCccccccCCce----EEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 92 FKWKFNNSGETLDVGSER----FSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~~~----~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
+.|++++.. +...... ....+ ..+.|.|..+..+|.|.|+|.|.|....
T Consensus 253 v~W~k~g~~--l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 253 VQWLHNEVQ--LPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEETTEE--CCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EEEEECCEE--CCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 999998742 2111111 00111 1346899999999999999999998654
No 378
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.43 E-value=2e-13 Score=114.01 Aligned_cols=230 Identities=13% Similarity=0.131 Sum_probs=129.5
Q ss_pred CCCCeeccCCCCceEEEECCeEEEccCCCCCCEeEEEEEEeC-CCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEE
Q psy11549 1 MAGGIPLAHNTSARIILSNQSLVLQKVSRQSAGTYKCSAINT-KGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDI 79 (261)
Q Consensus 1 ~~ng~~l~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~~~-~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l 79 (261)
++||+.|..+..+.......+|+|.++...|+| |+|.+... ........+.|.|..+|. ....|
T Consensus 45 ~~~~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~-y~C~~~~~~~~~~~~~~~~l~v~~pP~--------------~P~nl 109 (589)
T 3l5h_A 45 KTNHFTIPKEQYTIINRTASSVTFTDIASLNIQ-LTCNILTFGQLEQNVYGITIISGLPPE--------------KPKNL 109 (589)
T ss_dssp BCSSSBSCGGGCBCCSSSCCBCCCCCCCSSCCC-CCCC-CCTTCC-CCCCCCCCCC-CCCC--------------CCEEE
T ss_pred EeCCEECChHHccccCCcEeEEEEecCCCccee-eEEecccCCCcccEEEeEEEeccCCCC--------------CCEee
Confidence 367777754332222122458999999998876 66877532 111112334455544442 22344
Q ss_pred EEEEeeCCCCceeEEEEcCCcccc---cc-------CCceEE-eCCceeEEEEe-cCCCCcCeEEEEEEEcCCceEEe-e
Q psy11549 80 HCAVEADPPARSFKWKFNNSGETL---DV-------GSERFS-SGSRGSMLRYT-PVTELDYGTLSCAAQNAIGTQVT-P 146 (261)
Q Consensus 80 ~C~~~~~~~~~~~~W~~~~~~~~~---~~-------~~~~~~-~~~~~~~l~i~-~~~~~d~g~y~C~~~~~~~~~~~-~ 146 (261)
.|........ .+.|......... .+ ...... .........+. .+.....+.|+|.|.|..|.... .
T Consensus 110 ~c~~~~~~~~-~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~s~~ 188 (589)
T 3l5h_A 110 SCIVNEGKKM-RCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVTSDH 188 (589)
T ss_dssp EEEEETTSCE-EEEEECCSCCSSCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSCCCSSSCEEECEEEEESSCCBCCCC
T ss_pred EEEECCCceE-EEEECCCCcCCcCceEEEEEEEcCCCcccCCCCCCCcEEEEECCCCchheeEEEEEEEEeCCCCccccc
Confidence 4544433222 4445432111000 00 000011 11111233344 45566678899999999887532 2
Q ss_pred EEEEEEeCCCCCCCCcceEE--eecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccceeEEEe-----cCCCCcEEEcCC
Q psy11549 147 CLYQVVLAGKPQPPQNCSVR--NETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNLLVNLT-----NLDTPAFTLEDL 218 (261)
Q Consensus 147 ~~~~v~~~~~p~~p~~~~v~--~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~~ 218 (261)
..+.+....+|.+|.++.+. ......+.|+|.++...+.+ ..|.+.|+..+.. .|... ......+.|.+
T Consensus 189 ~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~--~w~~~~~~~~~~~~~~~~i~~- 265 (589)
T 3l5h_A 189 INFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS--TWSQIPPEDTASTRSSFTVQD- 265 (589)
T ss_dssp EEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCS--CCBCCCTTSSCSCCSEEEECS-
T ss_pred EEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCC--CcEEEccccCcCceeEEEECC-
Confidence 22222233478899988884 35688999999975443334 5699999886644 23111 22347889999
Q ss_pred CCCCccEEEEEEEEEcCCCcCCce---eeeeeeec
Q psy11549 219 GLDGTVLMRVVISGVNAKGRSLPV---IWDDFSMS 250 (261)
Q Consensus 219 ~l~~~~~Y~~~~~a~N~~G~~~~s---~~~~~~~~ 250 (261)
|.+++.|.|+|.|.|..|.+.+| ..+.+.+.
T Consensus 266 -L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~ 299 (589)
T 3l5h_A 266 -LKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITY 299 (589)
T ss_dssp -CCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCC
T ss_pred -CCCCCEEEEEEEEEeCCCCCccCCCCCccccccC
Confidence 99999999999999999987664 44444443
No 379
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1e-12 Score=83.18 Aligned_cols=91 Identities=12% Similarity=0.066 Sum_probs=62.4
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|.+...... ..+..|+.+.|.|.+ .|.+ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.|.|
T Consensus 8 ~~~~~~~~~-~~v~~G~~v~l~C~v--~p~p-~v~W~k~g~~l~-~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 8 LKILTPLTD-QTVNLGKEICLKCEI--SENI-PGKWTKNGLPVQ-ESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp CCCSBCCCC-EEEETTSCCCEEEEC--SSCC-CEEEEETTEECC-CCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CEEeccCCc-eEEcCCCCEEEEEEe--CCCC-eEEEEECCEECC-CCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 344444444 678899999999999 5666 799999874221 12223344455566899999999999999999999
Q ss_pred CCceEEeeEEEEEEeCCCCC
Q psy11549 139 AIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 139 ~~~~~~~~~~~~v~~~~~p~ 158 (261)
. .... ...+.|..+|.
T Consensus 83 ~--~~~~--~a~L~V~~~P~ 98 (100)
T 2yuz_A 83 Y--NVTL--PAKVHVISGPS 98 (100)
T ss_dssp S--CCCE--EEEEEEECCSC
T ss_pred C--CeeE--EEEEEEeCCCC
Confidence 7 2233 33444545553
No 380
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=1.5e-12 Score=82.55 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=64.0
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+|.+...+.. ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++..... ..|.|.++..+|+|.|+|.+.
T Consensus 8 ~P~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p-~v~W~~~~~~--~~~~~~~~~~~~~-~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 8 PPIILQGPAN-QTLAVDGTALLKCKATGDPLP-VISWLKEGFT--FPGRDPRATIQEQ-GTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp SCEEEECCCC-EEEESSSEEEECCEEECSSCC-EEEEEESSSE--ESSSCSSCEECTT-CCEEEESCCTTTCCEEEEEEE
T ss_pred CCEEEeCcCC-EEEcCCCcEEEEEEEEEcCCC-EEEEEECCEE--CCCCCCCEEEcCC-CEEEEccCCcccCEEEEEEEE
Confidence 3444433333 567899999999999999888 7999998743 3222333333222 269999999999999999999
Q ss_pred cCCceEEeeEEEEE
Q psy11549 138 NAIGTQVTPCLYQV 151 (261)
Q Consensus 138 ~~~~~~~~~~~~~v 151 (261)
|..|.......+.|
T Consensus 83 n~~g~~~~~~~l~V 96 (100)
T 2edj_A 83 SSSGETSWSAVLDV 96 (100)
T ss_dssp CSSCCCBCCEEEEE
T ss_pred cCCCCEEEEEEEEE
Confidence 99887766444444
No 381
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.42 E-value=1e-12 Score=96.50 Aligned_cols=121 Identities=13% Similarity=0.126 Sum_probs=75.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCC-----Cc--ceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTK-----GE--ATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP- 88 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~-----~~--~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 88 (261)
+|.|.+++.+|+|.|.|.+.+.. +. .......|.|. .+|.+...... ..+..|+.++|.|.+.+.++
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~L~C~~~~~~P~ 158 (230)
T 3n9g_H 80 YMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPE 158 (230)
T ss_dssp EEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCC-CCCCTTCEEEEEEEEEEEBSS
T ss_pred EEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCC-ccccCCCCEEEEEEEEeEECC
Confidence 49999999999999999998754 11 11234567775 23333311111 22458999999999998544
Q ss_pred CceeEEEEcCCccccccCCc-eEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 89 ARSFKWKFNNSGETLDVGSE-RFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~-~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+..+.| ++.......... .....+ ..+.|.|.....+| |.|+|.+.+..+....
T Consensus 159 ~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 217 (230)
T 3n9g_H 159 PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 217 (230)
T ss_dssp CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEE
T ss_pred CEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcce
Confidence 557999 443211100000 001111 12468899998889 9999999997765444
No 382
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.42 E-value=5e-12 Score=81.28 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=58.6
Q ss_pred EEeeCCCcEEEEEEEeeCCC---CceeEEEEcCCcccccc-CCceEEeC--------CceeEEEEecCCCCcCeEEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPP---ARSFKWKFNNSGETLDV-GSERFSSG--------SRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~---~~~~~W~~~~~~~~~~~-~~~~~~~~--------~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+.+..|++++|.|.+.+.|. | .+.|++++. ..... ...++... .....|.|.++..+|+|.|+|.+
T Consensus 14 ~~v~~G~~v~L~C~~~g~p~~~~p-~v~W~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (108)
T 3cx2_A 14 GEVTVGGSITFSARVAGASLLKPP-VVKWFKGKW-VDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEV 91 (108)
T ss_dssp EEEETTCCEEEEEEEECC-CCSCC-EEEEEETTT-EEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEeCCCCEEEEEEECCCccCCCc-EEEEccCCc-ccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEE
Confidence 67889999999999999887 6 899999652 11111 11122211 12457999999999999999999
Q ss_pred EcCCceEEeeEEEEE
Q psy11549 137 QNAIGTQVTPCLYQV 151 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v 151 (261)
.|..|.......+.|
T Consensus 92 ~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 92 STKDKFDCSNFNLTV 106 (108)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred ecCCCceEEEEEEEE
Confidence 999998877555544
No 383
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.42 E-value=6e-13 Score=84.86 Aligned_cols=96 Identities=17% Similarity=0.051 Sum_probs=75.5
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
.+|.+|.++.+.. ..+.+.|+|.++.+++.++. |+++|+......... .........++|.+ |.++..|+|+|.|
T Consensus 6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~~~W~~~~~~~~~~~t~~~v~~--L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 6 SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPG--LIKDVLYEFRLVA 82 (108)
T ss_dssp CCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCC--CCTTSCEECCBEE
T ss_pred CCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCCCCcEEeeeecCCCcCEEEeCC--CCCCCEEEEEEEE
Confidence 5678888888865 46789999998877777766 999998843322111 12234568999999 9999999999999
Q ss_pred EcCCCcCCceeeeeeeecccc
Q psy11549 233 VNAKGRSLPVIWDDFSMSGAH 253 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~~~~~ 253 (261)
.|..|.|++|..+.+.+.+.+
T Consensus 83 ~n~~G~s~pS~~~~v~T~~~~ 103 (108)
T 1v5j_A 83 FAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp EETTEEEEECSCCCCCCSSCS
T ss_pred EcCCCCcCCCCCEEEEeCCcc
Confidence 999999999999998876544
No 384
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.42 E-value=9.3e-13 Score=107.17 Aligned_cols=219 Identities=13% Similarity=0.130 Sum_probs=132.8
Q ss_pred CCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC---Cc--eeEEEEcCCcc-
Q psy11549 28 SRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP---AR--SFKWKFNNSGE- 101 (261)
Q Consensus 28 ~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~---~~--~~~W~~~~~~~- 101 (261)
...|.|.|.|.+.|..+...+.........+|... ... ........+.|.+....... .. .+.|...+...
T Consensus 303 ~s~~~Gs~~C~C~ng~~ra~~d~~~~~ct~pPsaP--~nl-~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~ 379 (536)
T 3fl7_A 303 LPSPEGATSCECEEGFFRAPQDPASMPCTRPPSAP--HYL-TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESG 379 (536)
T ss_dssp ECCCTTCSSCEECTTCBCCTTCCTTSCCBCCCCCB--SCE-EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CC
T ss_pred CCCCCCccEEEEeccccccCCCccccccccCCCcc--cce-EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCC
Confidence 45788999999999987653322222222233211 111 22345678888877543322 11 34444321100
Q ss_pred ccc--cCCceEE---eCCceeEEEEecCCCCcCeEEEEEEEcCCceEE-eeEEEEEEeCCCCCCCCcceEEeecCCeEEE
Q psy11549 102 TLD--VGSERFS---SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQV-TPCLYQVVLAGKPQPPQNCSVRNETTSSVHI 175 (261)
Q Consensus 102 ~~~--~~~~~~~---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~-~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l 175 (261)
... .....+. .......+.|.++.+...+.|++.|.|..|... ......+.+..+|.+|..+.+.......+.|
T Consensus 380 ~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~~~~s~tSV~L 459 (536)
T 3fl7_A 380 ECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRLEGRSTTSLSV 459 (536)
T ss_dssp CEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEEEECCC-CCEE
T ss_pred cccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCceeeccCCeEEE
Confidence 000 0011111 112344789999999999999999999887621 1112234444566667766666678999999
Q ss_pred EeecCCCCCCC-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccc
Q psy11549 176 SCTPGYDGGLP-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 176 ~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~ 252 (261)
+|.++...+.+ ..|.+.|+..... ..+.........++|.+ |.+++.|.|+|.|.|..|.+.+|..+.+++...
T Consensus 460 sW~pP~~~ng~I~~Y~V~y~~~~~~-~~~~~v~~~~ts~~l~g--L~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 460 SWSIPPPQQSRVWKYEVTYRKKGDS-NSYNVRRTEGFSVTLDD--LAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEECCTTTTTTCSEEEEEEEEC--C-CCCEEEEESSSEEECCS--CCSSCEEEEEEEEECC---CEECCCEEEECCC-
T ss_pred EEECCcCCCCcccEEEEEEEECCCC-ceEEEEcCCCCEEEECC--CCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99986555555 4599998876554 22333344568999999 999999999999999999999999998887543
No 385
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.41 E-value=1.1e-13 Score=101.71 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=72.7
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEE------eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeE
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVK------YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFK 93 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~ 93 (261)
+|.|.+++.+|+|.|+|.+.+..+.. .+.+.|. .+|.+......... ..+..++|.|.+.+.++ ...+.
T Consensus 78 ~L~I~~~~~~D~g~Y~C~~~~~~~~~---~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~ 153 (231)
T 2w59_A 78 AVPVSTQDWLSGERFTCTVQHEELPL---PLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIR 153 (231)
T ss_dssp EEECCHHHHHTTCCEEEEEECTTCSS---CEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEEecchhccCCCEEEEEEEcCCCCC---ceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEE
Confidence 69999999999999999999887543 2334443 23433211100001 13557999999998644 34899
Q ss_pred EEEcCCccccccC-CceEEeC---------C-c----eeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 94 WKFNNSGETLDVG-SERFSSG---------S-R----GSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 94 W~~~~~~~~~~~~-~~~~~~~---------~-~----~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
|++++........ ....... + . .+.|.|.....+|.|.|+|.|.|....
T Consensus 154 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 154 WLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp EEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred EEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 9998743211100 0000111 1 1 245777777777899999999997543
No 386
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.41 E-value=4.4e-10 Score=81.84 Aligned_cols=200 Identities=13% Similarity=0.164 Sum_probs=111.1
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcce-eeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEE--eeCCC-----Cce
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEAT-SNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAV--EADPP-----ARS 91 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~-s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~--~~~~~-----~~~ 91 (261)
+.|.|..++..|+|.|+|.+.+..|... +..+.|.+...+.+....+..+.+..|..+.|.+.+ .+..+ ..+
T Consensus 52 ~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yT 131 (304)
T 3shs_A 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELH 131 (304)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCE
T ss_pred ceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCce
Confidence 4899999999999999999999877652 223333322222222111112345678899999887 43322 348
Q ss_pred eEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCC-cceEEeecC
Q psy11549 92 FKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQ-NCSVRNETT 170 (261)
Q Consensus 92 ~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~-~~~v~~~~~ 170 (261)
++|++++. .+ .. ...|++......++|.|+|.+.+..+....+....+.+..-+-+.. ...-....|
T Consensus 132 YQWyKngt--~I--sg--------Aq~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~v~~~~~~~~~~~~~ 199 (304)
T 3shs_A 132 YSWSKGED--VI--DT--------TQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALG 199 (304)
T ss_dssp EEEEETTE--EE--ES--------SSEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEEEEECCCSEEEEETT
T ss_pred eEEeeCCe--Ec--cC--------ccccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccccchhheEeehhhcC
Confidence 99999873 11 11 1257788888899999999999986643332233333322111111 111223457
Q ss_pred CeEEEEeec-----CCCCCCCe---EEEEEEEeCCccceeE----------EEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 171 SSVHISCTP-----GYDGGLPQ---TFTLELYSASDLNLLV----------NLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 171 ~~~~l~c~~-----~~~~~~p~---~~~~~~~~~~~~~~~~----------~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
+.+.|..-+ +...+.|. .|.|+.+..+...... -.....+.++.-......+..+ |+|.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 277 (304)
T 3shs_A 200 NEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAK--FWCVA 277 (304)
T ss_dssp SCEEECCEEEEECCSCCTTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSCEEESSCCGGGCEE--EEEEE
T ss_pred cEEEEEEEEeeccccCCCCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCcceeecccccccchh--eeeHH
Confidence 777766533 34456662 3666665533221111 0112234555555544444444 48887
Q ss_pred E
Q psy11549 233 V 233 (261)
Q Consensus 233 ~ 233 (261)
.
T Consensus 278 ~ 278 (304)
T 3shs_A 278 K 278 (304)
T ss_dssp E
T ss_pred H
Confidence 4
No 387
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.7e-12 Score=87.08 Aligned_cols=83 Identities=13% Similarity=0.249 Sum_probs=61.8
Q ss_pred EEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCc--------------------------cccccCCce--EEeCCceeEE
Q psy11549 68 IVGASRSESVDIHCAVEADPPARSFKWKFNNSG--------------------------ETLDVGSER--FSSGSRGSML 119 (261)
Q Consensus 68 ~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~--------------------------~~~~~~~~~--~~~~~~~~~l 119 (261)
.+.+..|+++.|.|.+.+.|.| .+.|++++.. ..+.....+ +......+.|
T Consensus 27 ~~~v~~G~~v~L~C~~~G~P~P-~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L 105 (139)
T 1gxe_A 27 TIVVVAGNKLRLDVPISGDPAP-TVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIF 105 (139)
T ss_dssp EEEESSSSCCCCEEECCSBSCC-EEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEE
T ss_pred CEEEeCCCeEEEEEEEEEcCCC-eEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEE
Confidence 3778999999999999999998 8999998720 111111222 2333445689
Q ss_pred EEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEe
Q psy11549 120 RYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVL 153 (261)
Q Consensus 120 ~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~ 153 (261)
.|.++..+|+|.|+|.|.|..|..... +.|.|
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~~G~~~~~--~~L~V 137 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNPVGEDQVN--LTVKV 137 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECSSCEEEEE--EEEEE
T ss_pred EECCCCcccCEEEEEEEEeCCceEEEE--EEEEE
Confidence 999999999999999999999977664 44443
No 388
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.41 E-value=9.2e-12 Score=78.37 Aligned_cols=81 Identities=19% Similarity=0.262 Sum_probs=60.8
Q ss_pred EEeeCCCcEEEEEEEeeC-CCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 69 VGASRSESVDIHCAVEAD-PPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~-~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
+.+..|+.+.|.|.+.+. |.+ .+.|++++.... ......+........|.|.++..+|+|.|+|.+.|..|......
T Consensus 11 ~~v~~G~~v~l~C~~~g~~p~~-~v~W~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 88 (97)
T 2bk8_A 11 AVGEEGGHVKYVCKIENYDQST-QVTWYFGVRQLE-NSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYA 88 (97)
T ss_dssp EEECTTCCEEEEEEEESCCTTC-EEEEEETTEECC-SSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred EEEcCCCcEEEEEEEeccCCCC-EEEEEECCEECc-CCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEE
Confidence 678899999999999997 666 899999874211 11122222344556899999999999999999999999877744
Q ss_pred EEEE
Q psy11549 148 LYQV 151 (261)
Q Consensus 148 ~~~v 151 (261)
.+.|
T Consensus 89 ~l~V 92 (97)
T 2bk8_A 89 ELFV 92 (97)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 389
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.41 E-value=1.4e-11 Score=91.31 Aligned_cols=166 Identities=16% Similarity=0.139 Sum_probs=91.8
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc-------------ccCCceEEe---CCceeEEEEecCCCCcCeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL-------------DVGSERFSS---GSRGSMLRYTPVTELDYGTL 132 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~-------------~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y 132 (261)
+.+..|+.++|.|.+.+.+.+ .+.|++...+... .....++.. ......|.|.++..+|+|.|
T Consensus 11 v~v~~G~~v~L~C~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (245)
T 3nfj_J 11 LVQPVGSPLSLECTVEGTSNP-NLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFY 89 (245)
T ss_dssp EEEETTCCEEEEEEEESCSSC-EEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEecCCCCEEEEEEecCCCCc-eEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEE
Confidence 668899999999999987777 8999983221110 000112221 23455899999999999999
Q ss_pred EEEEEcCCc------eEEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCc
Q psy11549 133 SCAAQNAIG------TQVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSASD 198 (261)
Q Consensus 133 ~C~~~~~~~------~~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~ 198 (261)
.|.+.+..| .......+.+.... .+.+|.. .+.. ..|..++|.|.+ .+..|.. ...|+++...
T Consensus 90 ~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v-~~~~~~~~~~~~g~~~~l~C~~--~g~~p~~~~v~W~k~g~~ 166 (245)
T 3nfj_J 90 LCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEV-AVFEPSEAEISHTQKATLVCLA--TGFFPDHVELSWWVNGKE 166 (245)
T ss_dssp EEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEE-EEEECCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEE
T ss_pred EEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCce-EeecCCcccccCCCceEEEEEE--ccCcCCCEEEEEEECCEE
Confidence 999998322 12222233343211 2223322 2211 127899999997 4433432 2334444322
Q ss_pred cceeEEEec--------CCCC------cEEEcCCCCCC-ccEEEEEEEEEcCCCcCC
Q psy11549 199 LNLLVNLTN--------LDTP------AFTLEDLGLDG-TVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 199 ~~~~~~~~~--------~~~~------~~~i~~~~l~~-~~~Y~~~~~a~N~~G~~~ 240 (261)
......... .... .+.|......+ ++.| +|.|.|..+..+
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~Y--tC~v~~~~~~~~ 221 (245)
T 3nfj_J 167 VHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF--RCQVQFYGLSEN 221 (245)
T ss_dssp ECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEE--EEEEEECCBCSS
T ss_pred CCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeE--EEEEEECCCCCc
Confidence 111110000 0112 34455433444 6689 999999876544
No 390
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.39 E-value=7.5e-12 Score=81.74 Aligned_cols=82 Identities=23% Similarity=0.306 Sum_probs=61.7
Q ss_pred CCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCce-EEe-C------CceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 73 RSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSER-FSS-G------SRGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 73 ~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~-~~~-~------~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
.+..+.|.|.+.|.|.| ++.|++++. .+...... ... . .....|.|.++...|+|.|+|.|.|..|...
T Consensus 14 ~~~~~~l~c~v~G~P~P-~I~W~knG~--~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~ 90 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAP-SLRWLFNGS--VLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 90 (126)
T ss_dssp CCCEEEEEEEECCSSCC-EEEEEETTE--ECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEE
T ss_pred cCccEEEEEEEeeeCCC-eEEEEECCE--ECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEE
Confidence 67789999999999999 899999884 23222221 111 1 1235799999999999999999999999877
Q ss_pred eeEEEEEEeCCCCCC
Q psy11549 145 TPCLYQVVLAGKPQP 159 (261)
Q Consensus 145 ~~~~~~v~~~~~p~~ 159 (261)
. .+.+.+...|.+
T Consensus 91 ~--t~~l~v~~~P~~ 103 (126)
T 1he7_A 91 A--SIMAAFMDNPFE 103 (126)
T ss_dssp E--EEEECCCSCTTS
T ss_pred E--EEEEEEEcCCCC
Confidence 6 566667677764
No 391
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=98.53 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=73.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC----c-ceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeCCC-
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG----E-ATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEADPP- 88 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~----~-~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 88 (261)
+|.|.+++.+|+|.|+|.+.+..+ . .....+.|.|.. +|.+.........+..|+.++|.|.+.+.++
T Consensus 101 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~ 180 (279)
T 2wbj_D 101 TLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPD 180 (279)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSS
T ss_pred EEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCC
Confidence 899999999999999999998432 1 112335677764 2332211000011236899999999998754
Q ss_pred CceeEEEEcCCccccccCCceEE---------eCCc----eeEEEEecCCCC-cCeEEEEEEEcCCce
Q psy11549 89 ARSFKWKFNNSGETLDVGSERFS---------SGSR----GSMLRYTPVTEL-DYGTLSCAAQNAIGT 142 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~~~~---------~~~~----~~~l~i~~~~~~-d~g~y~C~~~~~~~~ 142 (261)
+..+.|++++.. +.... ... ..+. .+.|.|...... +.|.|+|.|.|....
T Consensus 181 ~~~v~W~k~g~~--l~~~~-~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 181 HVELSWWVNGKE--VHSGV-STDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp CEEEEEEETTEE--CCTTE-EECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred CcEEEEEECCEE--CCCCc-ccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 358999998742 21110 100 0111 224777776665 467899999997543
No 392
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.39 E-value=1.2e-12 Score=96.66 Aligned_cols=122 Identities=13% Similarity=0.125 Sum_probs=74.6
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC-----------c-ceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEe
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG-----------E-ATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVE 84 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~-----------~-~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 84 (261)
+|.|.+++.+|+|.|.|.+.+..+ . .......|.|. .+|.+...... ..+..|+.++|.|.+.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g~~v~l~C~~~ 165 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVK 165 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCC-CCC--TTEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCC-hhhccCCcEEEEEEEe
Confidence 599999999999999999976532 0 11223456664 23333311111 2244699999999999
Q ss_pred eCCC-CceeEEEEcCCccccccCCceEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 85 ADPP-ARSFKWKFNNSGETLDVGSERFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 85 ~~~~-~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+.++ +..+.|++++........ ......+ ..+.|.|.....+| |.|+|.+.+..+....
T Consensus 166 ~~~p~~~~v~W~~~g~~~~~~~~-~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 229 (239)
T 3tv3_H 166 DYFPEPVTVSWNSGALTSGVHTF-PAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 229 (239)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEEC-CCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEE
T ss_pred eEeCCCeEEEEEECCccCceEec-CceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceE
Confidence 8544 556899887642111110 0011111 12368888888888 9999999997755444
No 393
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.38 E-value=4.9e-14 Score=92.93 Aligned_cols=102 Identities=23% Similarity=0.409 Sum_probs=74.6
Q ss_pred eeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccccc-CCceEEe----CCc--eeEEE
Q psy11549 48 SNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDV-GSERFSS----GSR--GSMLR 120 (261)
Q Consensus 48 s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~-~~~~~~~----~~~--~~~l~ 120 (261)
+..+.|.|..+|.+.. ... ..+..|+.+.|.|.+.+.|.|..+.|++++.. +.. ...++.. ... .+.|.
T Consensus 4 ~~~~~l~V~~~P~i~~-~~~-~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~L~ 79 (122)
T 2cry_A 4 GSSGTLTVNGPPIISS-TQT-QHALHGEKGQIKCFIRSTPPPDRIAWSWKENV--LESGTSGRYTVETISTEEGVISTLT 79 (122)
T ss_dssp SCCCCCCCCSSCCEEE-ECC-CCCCTTSCCCCCEEECCSSCCSEEEEESSSCE--ECSEEETTEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEEecCCCccC-CCe-EEEecCCCEEEEEEEeecCCCcEeEEEECCEE--ccCCCCCCEEEEEecCCCceEEEEE
Confidence 4456788888888776 333 67889999999999999998845999998742 221 1223322 122 55899
Q ss_pred EecCCCCcC-eEEEEEEEcCCceEEeeEEEEEEeCC
Q psy11549 121 YTPVTELDY-GTLSCAAQNAIGTQVTPCLYQVVLAG 155 (261)
Q Consensus 121 i~~~~~~d~-g~y~C~~~~~~~~~~~~~~~~v~~~~ 155 (261)
|.++..+|. |.|+|.|.|..|.... .+.+.+..
T Consensus 80 I~~v~~~D~~G~Y~C~a~N~~G~~~~--~~~l~V~~ 113 (122)
T 2cry_A 80 ISNIVRADFQTIYNCTAWNSFGSDTE--IIRLKEQG 113 (122)
T ss_dssp CTTCCHHHHHSCEEEEEECSSCEEEE--EECCCCSC
T ss_pred EcCCChhhCCceEEEEEECCCCeEEE--EEEEEECC
Confidence 999999999 9999999999998776 44455543
No 394
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.38 E-value=2.2e-11 Score=88.01 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=98.9
Q ss_pred eEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeC--CCCCCCCcceEEeecCCeEEEEeecCCCCCCC-eEEEEEE
Q psy11549 117 SMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLA--GKPQPPQNCSVRNETTSSVHISCTPGYDGGLP-QTFTLEL 193 (261)
Q Consensus 117 ~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~--~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~ 193 (261)
..+.+.++.....+.|++.|.|..|....+..+.+.-. .+|.+|..+.+.......+.|+|.++.+.+.+ ..|.+.|
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~ 147 (209)
T 2vkw_A 68 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRY 147 (209)
T ss_dssp SEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEE
T ss_pred ceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEE
Confidence 36889999999999999999998876544333333322 25778887777777889999999986555555 4599998
Q ss_pred EeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccc
Q psy11549 194 YSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~ 252 (261)
+..................++|.+ |.+++.|.|+|.|.|..|.|++|.+........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~~~ 204 (209)
T 2vkw_A 148 RALSSEWKPEIRLPSGSDHVMLKS--LDWNAEYEVYVVAENQQGKSKAAHFVFRTAAAH 204 (209)
T ss_dssp EETTSCCCCCEEECTTCCEEEECS--CCTTCEEEEEEEEEETTEECCCEEEEEECC---
T ss_pred ECCCCCCceeeecCCCccEEEecC--CCCCCEEEEEEEEEeCCccCCcchhhhhhhhhh
Confidence 873322211233334557899999 999999999999999999999999998876543
No 395
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=5.5e-12 Score=82.48 Aligned_cols=91 Identities=13% Similarity=0.250 Sum_probs=65.8
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+|.+...... ..+..|+.+.|.|.+.+.|.+ .+.|++++.. +.....++.... ...|.|.++..+|+|.|+|.|.
T Consensus 8 pP~i~~~p~~-~~v~~G~~v~l~C~~~g~p~p-~i~W~k~g~~--~~~~~~~~~~~~-~~~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 8 PPVIRQGPVN-QTVAVDGTFVLSCVATGSPVP-TILWRKDGVL--VSTQDSRIKQLE-NGVLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp SCCCSBCCCC-EEEETTCEEEEECBCCCSSCC-EEEEEESSSB--CCTTSTTEEEEE-TTEEEEESCCGGGCCCEEEEEE
T ss_pred CCEEEcCCCC-EEEcCCCeEEEEEEEEecCCC-EEEEEECCEE--CcCCCCeEEEcc-CCEEEEccCCcCCCEEEEEEEE
Confidence 4444444443 678899999999999998888 8999998743 222233333222 2269999999999999999999
Q ss_pred cCCceEEeeEEEEEEe
Q psy11549 138 NAIGTQVTPCLYQVVL 153 (261)
Q Consensus 138 ~~~~~~~~~~~~~v~~ 153 (261)
|..|.......+.|..
T Consensus 83 n~~g~~~~~~~l~V~~ 98 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQE 98 (118)
T ss_dssp CSSCEEEEECCEEEEC
T ss_pred cCCCcEEEEEEEEEEe
Confidence 9999877655555543
No 396
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.38 E-value=9.1e-12 Score=103.80 Aligned_cols=166 Identities=17% Similarity=0.183 Sum_probs=98.7
Q ss_pred EEeeCCCcEEEEEEE-eeCCCCceeEEEEcCCccccc----c-----CCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 69 VGASRSESVDIHCAV-EADPPARSFKWKFNNSGETLD----V-----GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~-~~~~~~~~~~W~~~~~~~~~~----~-----~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
..+..|++++|.|.+ .+.|.+ .+.|++++...... . ...+...... .+|.|.++..+|+|.|+|.+.+
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQ-RLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPN-GSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSC-EEEEEEEETTSSSCEECCSCCSSGGGGTSEECTT-SCEEESSCCGGGCEEEEEEEEC
T ss_pred cceecCCcEEEeeeecCCCCCc-eEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCC-ceEEEeccccccCeEEEEEEEc
Confidence 678899999999998 666666 89999976421110 0 0112222222 2699999999999999999999
Q ss_pred CCceE-EeeEEEEEEeCCCCCCCCcc---eEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCcc-----ceeE--EEec
Q psy11549 139 AIGTQ-VTPCLYQVVLAGKPQPPQNC---SVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDL-----NLLV--NLTN 207 (261)
Q Consensus 139 ~~~~~-~~~~~~~v~~~~~p~~p~~~---~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~-----~~~~--~~~~ 207 (261)
..+.. .. .+.+.|..+|..|... ......+..+.|.|.+ .++.|...+.|+++.... .... ....
T Consensus 454 ~~~~~~~~--~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~--~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~ 529 (581)
T 3o3u_N 454 RNGKETKS--NYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVS--EGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRR 529 (581)
T ss_dssp TTSCEEEE--EEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEE--EEEBSCCEEEEEETTEECCTTSTTEEEEEEEEE
T ss_pred CCCceeEE--EEEEEEEcCCCCCEEEcCCcccccCCceeEEEEEC--CCCCCCCeEEEEECCEECCCCCCeEEEEeeeEE
Confidence 88776 44 4445555555544311 1122334555679997 444454434445542211 1111 1111
Q ss_pred C-C------CCcEEEcCCC-CCCccEEEEEEEEEcCCCcCCce
Q psy11549 208 L-D------TPAFTLEDLG-LDGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 208 ~-~------~~~~~i~~~~-l~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
. . ...|.|..++ ..+.+.| +|.|.|.++.....
T Consensus 530 ~~~~g~y~~~s~L~i~~~~~~d~~~~y--~C~~~n~~~~~~~~ 570 (581)
T 3o3u_N 530 HPETGLFTLQSELMVTPARGGDPRPTF--SCSFSPGLPRHRAL 570 (581)
T ss_dssp CTTTCCEEEEEEEEECCCTTSCSCCCE--EEEEECSSCSSCCE
T ss_pred cCCCceEEEEEEEEEEeccccCCCceE--EEEEeccCCCCCcc
Confidence 0 1 1347777755 4457788 99999998755433
No 397
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.38 E-value=1.2e-11 Score=92.58 Aligned_cols=164 Identities=13% Similarity=0.130 Sum_probs=93.2
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc----c------------CCceEEeC----CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD----V------------GSERFSSG----SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~----~------------~~~~~~~~----~~~~~l~i~~~~~~ 127 (261)
+.+..|++++|.|.+.+.+. ...+.|++...+.... . ...++... .....|.|.++..+
T Consensus 16 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 95 (261)
T 2xqy_G 16 ELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSE 95 (261)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCcc
Confidence 56789999999999987762 2379999864322110 0 01233322 23568999999999
Q ss_pred cCeEEEEEEEcCCc-e--EEeeEEEEEEeCCCCCCCCcceEE----eecCCeEEEEeecCCCCCCCeE-EEEEEEeCCcc
Q psy11549 128 DYGTLSCAAQNAIG-T--QVTPCLYQVVLAGKPQPPQNCSVR----NETTSSVHISCTPGYDGGLPQT-FTLELYSASDL 199 (261)
Q Consensus 128 d~g~y~C~~~~~~~-~--~~~~~~~~v~~~~~p~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~ 199 (261)
|+|.|.|.+.+..+ . ......+.|.. .++.+|...... ...++.++|.|.+ .+..|.. .+.|++.....
T Consensus 96 DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~-~~~~~P~v~~~~p~~~v~~g~~v~L~C~~--~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 96 DSAVYYCGRLGYVYGFDYWGQGTTLTVSS-AKTTAPSVYPLAPVCGDTTGSSVTLGCLV--KGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp GCEEEEEEEECTTSSEEEECCCEEEEECS-SCCBCCEEEEECCCCC--CCSEEEEEEEE--EEEBSSCCEEEEGGGTCCT
T ss_pred cCeEEEEEEecCCCcceEECCCEEEEEcc-CCCCCCeEEEeCCCccccCCCcEEEEEEE--EeEeCCCCEEEEecCCCcC
Confidence 99999999998642 1 11222333332 122233211111 1348899999997 3333432 33344433221
Q ss_pred cee-E-EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 200 NLL-V-NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 200 ~~~-~-~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
... . ..... ....|.|..+...+ +.| +|.|.|....
T Consensus 173 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y--tC~v~n~~~~ 214 (261)
T 2xqy_G 173 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSI--TCNVAHPASS 214 (261)
T ss_dssp TEEECCCEEETTEEEEEEEEEEETTTTTT-SCC--EEEEEEGGGT
T ss_pred ceEecCceecCCcEEEEEEEEEeccccCC-CEE--EEEEEECCCC
Confidence 100 0 00000 12467788866667 999 9999997654
No 398
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.37 E-value=4e-11 Score=90.61 Aligned_cols=166 Identities=15% Similarity=0.082 Sum_probs=93.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc----------------cCCceEEe---CCceeEEEEecCCCCcC
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD----------------VGSERFSS---GSRGSMLRYTPVTELDY 129 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~----------------~~~~~~~~---~~~~~~l~i~~~~~~d~ 129 (261)
+.+.+|++++|.|.+.+.+.+ .+.|++...+.... ....++.. ......|.|.++..+|+
T Consensus 34 v~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~ 112 (279)
T 2wbj_D 34 VISKSGTSVKIECRSLDFQAT-TMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 112 (279)
T ss_dssp EEEETTSCEEEEEEESSSCEE-EEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGC
T ss_pred EEecCCCeEEEEEEeCCCCCC-eEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCC
Confidence 668899999999999776655 89999864221110 01123332 23456899999999999
Q ss_pred eEEEEEEEcCCc------eEEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCe-EEEEEEEe
Q psy11549 130 GTLSCAAQNAIG------TQVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQ-TFTLELYS 195 (261)
Q Consensus 130 g~y~C~~~~~~~------~~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~-~~~~~~~~ 195 (261)
|.|+|.+.+..+ .......+.|.... .+.+|. +.+.. ..|..++|.|.+ .+..|. ..+.|+++
T Consensus 113 G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~-v~~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~k~ 189 (279)
T 2wbj_D 113 SFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPE-VAVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVN 189 (279)
T ss_dssp EEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCE-EEEEECCHHHHHHHSCCEEEEEE--EEEBSSCEEEEEEET
T ss_pred EEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCE-EEEECCCcccccCCCceEEEEEE--eeEcCCCcEEEEEEC
Confidence 999999998421 11122234443311 122333 22221 147899999997 444453 33444454
Q ss_pred CCccceeEEEe--------cCCCC------cEEEcCCCCC-CccEEEEEEEEEcCCCcCC
Q psy11549 196 ASDLNLLVNLT--------NLDTP------AFTLEDLGLD-GTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 196 ~~~~~~~~~~~--------~~~~~------~~~i~~~~l~-~~~~Y~~~~~a~N~~G~~~ 240 (261)
........... ..... .+.|...... +++.| +|.|.|.....+
T Consensus 190 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~Y--tC~v~n~~~~~~ 247 (279)
T 2wbj_D 190 GKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHF--RCQVQFYGLSEN 247 (279)
T ss_dssp TEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEE--EEEEEECCBCTT
T ss_pred CEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEE--EEEEEeCCCCCC
Confidence 32211111110 01122 2556553343 46789 999999877554
No 399
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.37 E-value=5.2e-12 Score=82.60 Aligned_cols=98 Identities=20% Similarity=0.233 Sum_probs=66.8
Q ss_pred EEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC-ceEEeC----CceeEEEEecCCC
Q psy11549 52 KLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS-ERFSSG----SRGSMLRYTPVTE 126 (261)
Q Consensus 52 ~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~~~----~~~~~l~i~~~~~ 126 (261)
.|.|.++|.+...... .......|.|.+.+.|.| .+.|++++.. +.... ..+... .....|.|.++..
T Consensus 2 ~L~V~~pP~i~~~~~~----~~~~~~~l~C~~~g~P~p-~i~W~k~g~~--l~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 74 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP----ELRLEHCIEFVVRGNPPP-TLHWLHNGQP--LRESKIIHVEYYQEGEISEGCLLFNKPTH 74 (118)
T ss_dssp --CCCCCCCCCCCCCC----CCCCEEEEEEEEECSSCC-EEEEEETTEE--CCCSSSEEEEEEECSSEEEEEEEEESCCG
T ss_pred EEEEecCCceeccCCC----eeccceEEEEEeeeeCCC-eEEEEECCEE--CCCCCceeEEEeccCccccEEEEECCCCh
Confidence 5677788876544322 133667899999999988 8999998742 22221 122211 1345799999999
Q ss_pred CcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 127 LDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
+|+|.|+|.|.|..|.... .+.+.+...|.
T Consensus 75 ~d~G~Y~C~a~N~~G~~~~--~~~l~v~~~P~ 104 (118)
T 1wwc_A 75 YNNGNYTLIAKNPLGTANQ--TINGHFLKEPF 104 (118)
T ss_dssp GGCEEEEEEEEETTEEEEE--EEEECCSCCCC
T ss_pred hcCEEEEEEEECCCCeEee--EEEEEEccCCC
Confidence 9999999999999988777 45555555553
No 400
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.37 E-value=1.7e-12 Score=83.24 Aligned_cols=79 Identities=16% Similarity=0.273 Sum_probs=60.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
+.+..|+++.|.|.+.+.|.| .+.|++++.... ......+........|.|.++..+|+|.|+|.+.|..|.......
T Consensus 24 ~~v~~G~~v~L~C~~~g~p~p-~v~W~k~g~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 101 (106)
T 1nct_A 24 MTVYEGESARFSCDTDGEPVP-TVTWLRKGQVLS-TSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFT 101 (106)
T ss_dssp EEESSSSCEECCEEEECSSCC-BCCBCSSSSCCT-TCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEE
T ss_pred EEEeCCCcEEEEEEEEEcCCC-EEEEEECCEECC-CCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEE
Confidence 678899999999999998888 899999774321 112222333444568999999999999999999999988666433
Q ss_pred E
Q psy11549 149 Y 149 (261)
Q Consensus 149 ~ 149 (261)
+
T Consensus 102 l 102 (106)
T 1nct_A 102 L 102 (106)
T ss_dssp E
T ss_pred E
Confidence 3
No 401
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.37 E-value=2.7e-13 Score=100.08 Aligned_cols=120 Identities=16% Similarity=0.119 Sum_probs=72.0
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEE--EEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKL--RVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l--~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~ 95 (261)
.+|.|.+++.+|+|.|+|.+.+..+.. ....+.+ .+..+|.+...... .....|+.+.|.|.+.+.++ +..+.|+
T Consensus 82 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~-~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (239)
T 1i1c_A 82 SELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPP-KEEMTQSQVSITCMVKGFYPPDIYTEWK 160 (239)
T ss_dssp EEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCC-GGGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCC-hHHhcCCcEEEEEEEeeeECCCeEEEEE
Confidence 479999999999999999999987754 1222222 23345544321111 01124788999999998544 4589999
Q ss_pred EcCCccccccCCceEE-eCCc----eeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 96 FNNSGETLDVGSERFS-SGSR----GSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 96 ~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+++..... ....... ..++ .+.|.+.....+|.|.|+|.|.|...
T Consensus 161 k~g~~l~~-~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 161 MNGQPQEN-YKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp ETTEECSS-EEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ECCEECCC-ceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 98742110 0011111 1111 12344444334468999999999754
No 402
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=4.1e-12 Score=80.97 Aligned_cols=93 Identities=12% Similarity=0.152 Sum_probs=64.1
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|.+...... ..+..|+.+.|.|.+.+ +.+ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.+.|
T Consensus 9 p~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~-~v~W~k~g~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 9 AAIIKPLED-QWVAPGEDVELRCELSR-AGT-PVHWLKDRKAIR-KSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCEEECCCC-EEECTTSCEEECCEESS-SSC-CCCEEESSCBCC-CSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred cEEEecCCc-cEEcCCCCEEEEEEEeC-CCC-cEEEEECCEEcc-CCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 334333333 67889999999999997 555 799999874321 12222333344466899999999999999999998
Q ss_pred CCceEEeeEEEEEEeCCCCCCCC
Q psy11549 139 AIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 139 ~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
. . ..+.+.|..+|.+|.
T Consensus 85 ~----~--~~~~l~V~~~p~~~~ 101 (103)
T 2edf_A 85 S----K--STASLHVEEKASGPS 101 (103)
T ss_dssp C----E--EEEEEEECCCSSSSC
T ss_pred C----C--cEEEEEEeCCCCCCC
Confidence 2 2 245566667776653
No 403
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.37 E-value=2.1e-12 Score=95.87 Aligned_cols=120 Identities=13% Similarity=0.149 Sum_probs=73.1
Q ss_pred eEEEccCCCCCCEeEEEEEEeCC---------------------CcceeeeEEEEEE----eeceeecCceeEEEeeCCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTK---------------------GEATSNQLKLRVK----YAPICKSDRIVIVGASRSE 75 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~---------------------~~~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~ 75 (261)
+|+|.+++.+|+|.|.|.+.+.. .........|.|. .+|.+...... ..+..|+
T Consensus 79 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g~ 157 (248)
T 3u2s_H 79 YLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPS-SKSTSGG 157 (248)
T ss_dssp EEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC-------C
T ss_pred EEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCC-ccccCCC
Confidence 59999999999999999997642 1111233566665 23333311111 2234689
Q ss_pred cEEEEEEEeeCCC-CceeEEEEcCCcccccc------CCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 76 SVDIHCAVEADPP-ARSFKWKFNNSGETLDV------GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 76 ~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~------~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.++|.|.+.+..+ +..+.|++++....... .+..+.. .+.|.|......+ |.|+|.+.+..+....
T Consensus 158 ~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~---~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 230 (248)
T 3u2s_H 158 TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL---SSVVTVPSSSLGT-QTYICNVNHKPSNTKV 230 (248)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE---EEEEEEEGGGBTT-BCCEEEEEEGGGTEEE
T ss_pred cEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEE---EEEEEEChhhcCC-CeEEEEEEECCCCcce
Confidence 9999999998544 55899988764211110 1111111 2367788887778 9999999997655443
No 404
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.37 E-value=4.2e-13 Score=96.91 Aligned_cols=138 Identities=15% Similarity=0.120 Sum_probs=74.5
Q ss_pred CCCCeeccCCC-CceEEEECCeEEEcc---CCCC---CCEeEEEEEEeCCCcc-eeeeEEE--EEEeeceeecCceeEEE
Q psy11549 1 MAGGIPLAHNT-SARIILSNQSLVLQK---VSRQ---SAGTYKCSAINTKGEA-TSNQLKL--RVKYAPICKSDRIVIVG 70 (261)
Q Consensus 1 ~~ng~~l~~~~-~~~~~~~~~~L~i~~---~~~~---D~G~Y~C~~~~~~~~~-~s~~~~l--~V~~~p~~~~~~~~~~~ 70 (261)
||||+++.... .......++.|.+.. +... |+|.|+|.|.|..+.. .+..+.+ .+..+|.+........
T Consensus 42 ~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~- 120 (207)
T 1l6x_A 42 YVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRD- 120 (207)
T ss_dssp EETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGG-
T ss_pred EECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChH-
Confidence 47887775321 112233345555432 3344 4999999999987754 1222222 2334554432111101
Q ss_pred eeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccccC-CceEEeC-Cc----eeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 71 ASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLDVG-SERFSSG-SR----GSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~-~~~~~~~-~~----~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
...|..+.|.|.+.+.++ +..+.|++++.. +... ...+... ++ .+.|.+.....+|.|.|+|.|.|...
T Consensus 121 ~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~--~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 121 ELTKNQVSLTCLVKGFYPSDIAVEWESNGQP--ENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp GGGSSEEEEEEEEEEEBSSCCEEEEEETTEE--ECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred HhcCCcEEEEEEEeCeECCCeEEEEEECCee--ccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 124667999999998644 348999998742 2111 1111111 11 12344544444578999999999753
No 405
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.36 E-value=2.3e-11 Score=91.36 Aligned_cols=165 Identities=13% Similarity=0.093 Sum_probs=90.7
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc---------------cCCceEEeC---CceeEEEEecCCCCcCe
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD---------------VGSERFSSG---SRGSMLRYTPVTELDYG 130 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~---------------~~~~~~~~~---~~~~~l~i~~~~~~d~g 130 (261)
+.+..|++++|.|.+. .+.+ .+.|++...+.... ....++... .....|.|.++..+|+|
T Consensus 36 v~v~~G~~v~L~C~~~-~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G 113 (268)
T 3pl6_D 36 KVTEKGKYVELRCDPI-SGHT-ALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSA 113 (268)
T ss_dssp EEEETTCCEEEEEBCB-TTCC-EEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCE
T ss_pred EEecCCCCEEEEEEeC-CCCc-eEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCE
Confidence 6788999999999986 3444 89999832211110 000233321 23568999999999999
Q ss_pred EEEEEEEcC--CceEEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccc
Q psy11549 131 TLSCAAQNA--IGTQVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLN 200 (261)
Q Consensus 131 ~y~C~~~~~--~~~~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~ 200 (261)
.|+|.+.+. .........+.+.... .+.+|. +.+.. ..|..++|.|.+ .+..|.. .+.|+++.....
T Consensus 114 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~-v~~~~~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 114 VYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPE-VAVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp EEEEEEESSSSSCEECCCEEEEEESCGGGCBCCE-EEEECCCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEESSSEEC
T ss_pred EEEEEEecCCCceeeCCcEEEEEecCcccccCCc-eEEeCCCcccccCCCceEEEEEE--CcccCCCeEEEEEECCEECC
Confidence 999999974 2223333244443211 222332 12211 237899999997 4434432 333444432221
Q ss_pred eeEEEe--------cCCCC------cEEEcCCCCCC-ccEEEEEEEEEcCCCcCC
Q psy11549 201 LLVNLT--------NLDTP------AFTLEDLGLDG-TVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 201 ~~~~~~--------~~~~~------~~~i~~~~l~~-~~~Y~~~~~a~N~~G~~~ 240 (261)
...... ..... .+.|......+ +|.| +|.|.|.....+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~Y--tC~v~~~~l~~~ 243 (268)
T 3pl6_D 191 SGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHF--RCQVQFYGLSEN 243 (268)
T ss_dssp TTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEE--EEEEEECCBCTT
T ss_pred CCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEE--EEEEEcCCCCCC
Confidence 111100 01122 23454433344 8999 999999876543
No 406
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.36 E-value=1.6e-11 Score=90.87 Aligned_cols=165 Identities=13% Similarity=0.072 Sum_probs=89.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc------------ccC---CceEEe---CCceeEEEEecCCCCcCe
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL------------DVG---SERFSS---GSRGSMLRYTPVTELDYG 130 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~------------~~~---~~~~~~---~~~~~~l~i~~~~~~d~g 130 (261)
+.+.+|++++|.| ..+.+.+ .+.|++...+... ... ..++.. ......|.|.++..+|+|
T Consensus 12 v~v~~G~~v~L~C-~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 89 (245)
T 4ei6_B 12 QIIDMGQMVTLNC-DPVSNHL-YFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSA 89 (245)
T ss_dssp EEEETTCCEEEEE-ECCTTCC-EEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCE
T ss_pred EEecCCCCEEEEE-EcCCCCC-EEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCE
Confidence 6688999999999 5555556 8999982211100 000 033332 223558999999999999
Q ss_pred EEEEEEEcCC----ceEEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCc
Q psy11549 131 TLSCAAQNAI----GTQVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSASD 198 (261)
Q Consensus 131 ~y~C~~~~~~----~~~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~ 198 (261)
.|.|.+.+.. ........+.+.... .+.+|. +.+.. ..|..++|.|.+ .+..|.. ...|+++...
T Consensus 90 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~-~~~~~~~~~~~~~g~~v~l~C~~--~g~~p~~~~v~W~~~g~~ 166 (245)
T 4ei6_B 90 VYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPE-VAVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKE 166 (245)
T ss_dssp EEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCE-EEEECCCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEE
T ss_pred EEEEEEccCCCcceEEEcCCcEEEEecccCCCCCce-EEEeCCCcccccCCCceEEEEEE--eeEeCCCeEEEEEECCEE
Confidence 9999999532 222232244443211 112232 11211 237899999997 3434432 2334443221
Q ss_pred cceeEEEec--------CCCC------cEEEcCCCCCC-ccEEEEEEEEEcCCCcCC
Q psy11549 199 LNLLVNLTN--------LDTP------AFTLEDLGLDG-TVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 199 ~~~~~~~~~--------~~~~------~~~i~~~~l~~-~~~Y~~~~~a~N~~G~~~ 240 (261)
......... .... .+.|......+ ++.| +|.|.|......
T Consensus 167 l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~y--tC~v~~~~l~~~ 221 (245)
T 4ei6_B 167 VHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF--RCQVQFYGLSEN 221 (245)
T ss_dssp ECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEE--EEEEEECCBCTT
T ss_pred CCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeE--EEEEEECCCCCc
Confidence 111111000 0112 25566543445 8899 999999776544
No 407
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.36 E-value=1.8e-11 Score=88.29 Aligned_cols=160 Identities=16% Similarity=0.153 Sum_probs=90.8
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc-c--------CCceEEeC-----CceeEEEEecCCCCcCeEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD-V--------GSERFSSG-----SRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~-~--------~~~~~~~~-----~~~~~l~i~~~~~~d~g~y~C 134 (261)
+.+..|+.++|.|.+.... + .+.|++...+.... + ...++... .....|.|.++..+|+|.|.|
T Consensus 11 v~v~~G~~v~L~C~~~~~~-~-~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (207)
T 1ypz_E 11 LSLHEGTDSALRCNFTTTM-R-SVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFC 88 (207)
T ss_dssp EEEETTCCEEEEEEESSCC-S-EEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEE
T ss_pred EEEccCCcEEEEEEEeCCC-e-EEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEE
Confidence 6788999999999998654 4 79999864322111 0 12233322 345689999999999999999
Q ss_pred EEEcCCc---------e--EEeeEEEEEEeCC-CCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccce
Q psy11549 135 AAQNAIG---------T--QVTPCLYQVVLAG-KPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNL 201 (261)
Q Consensus 135 ~~~~~~~---------~--~~~~~~~~v~~~~-~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~ 201 (261)
.+.+..+ . ......+.|.... .+.+|. +.+.. ..+.|.|.+ .+..|. ..+.|+++ .....
T Consensus 89 ~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~-v~~~~---~~~~l~C~~--~g~~P~~~~v~W~~~-~~l~~ 161 (207)
T 1ypz_E 89 AADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPS-VFIMK---NGTNVACLV--KDFYPKEVTISLRSS-KKIVE 161 (207)
T ss_dssp EEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCE-EEEEE---ETTEEEEEE--EEESSSCCEEEEECS-SEEEE
T ss_pred EEecCCcccccccccceeeecCccEEEEccCCCCCCCCe-EEEeC---CCCeEEEEE--eeEeCCCeEEEEecC-CcccC
Confidence 9987532 1 1122344444321 223443 22222 237899987 444443 23334443 22111
Q ss_pred eE-EEecCCCCcEEEcCCC-CCCccEEEEEEEEEcCCCcC
Q psy11549 202 LV-NLTNLDTPAFTLEDLG-LDGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 202 ~~-~~~~~~~~~~~i~~~~-l~~~~~Y~~~~~a~N~~G~~ 239 (261)
.. .........|.+.... ..+.+.| +|.+.|..+..
T Consensus 162 ~~~~~~~~~~g~y~~~~~~~~~~~~~y--tC~v~~~~~~~ 199 (207)
T 1ypz_E 162 FDPAIVISPSGKYSAVKLGQYGDSNSV--TCSVQHNSETV 199 (207)
T ss_dssp CCCEEEECTTSSEEEEECEEESSTTTC--EEEEEETTEEE
T ss_pred CccceEEcCCCcEEEEEeecccCCCcE--EEEEEECCccE
Confidence 10 1111233556665422 2457889 99999988743
No 408
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=99.36 E-value=2.1e-13 Score=113.80 Aligned_cols=167 Identities=16% Similarity=0.127 Sum_probs=109.2
Q ss_pred EEeeCCCcEEEEEEEe-------eCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 69 VGASRSESVDIHCAVE-------ADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~-------~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
..+..|++++|.|.+. +.+.+ .|.|++++. .+.....+ ...+..+.|.|.++...|.+ |+|.+.....
T Consensus 13 ~~v~~G~~v~l~C~~~~~~~~~~~~~~~-~i~W~~~~~--~i~~~~~~-~~~~~~~~l~i~~~~~~~~~-y~C~~~~~~~ 87 (589)
T 3l5h_A 13 PVVQLHSNFTAVCVLKEKCMDYFHVNAN-YIVWKTNHF--TIPKEQYT-IINRTASSVTFTDIASLNIQ-LTCNILTFGQ 87 (589)
T ss_dssp CCCCSSSCCCCCC-CCTTTTTTTTCCTT-TCCCBCSSS--BSCGGGCB-CCSSSCCBCCCCCCCSSCCC-CCCC-CCTTC
T ss_pred CEEeCCCCEEEEEEEeCccCcccccccc-ceEEEeCCE--ECChHHcc-ccCCcEeEEEEecCCCccee-eEEecccCCC
Confidence 4467899999999997 44445 799988773 22221111 23444668999999888754 7898864221
Q ss_pred eEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEc-CCCC
Q psy11549 142 TQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLE-DLGL 220 (261)
Q Consensus 142 ~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l 220 (261)
.........+.+..+|.+|.++.........+.++|.++.+.+....|.+.++..................+.+. + +
T Consensus 88 ~~~~~~~~~l~v~~pP~~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~~~~~~~~~c~~~~~--l 165 (589)
T 3l5h_A 88 LEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYS--T 165 (589)
T ss_dssp C-CCCCCCCCCC-CCCCCCEEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCCEECBTTBSSCCBCCSC--C
T ss_pred cccEEEeEEEeccCCCCCCEeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCcccCCCCCCCcEEEEECCC--C
Confidence 111111334566689999999988877788999999986666556678888765443221122122223556666 5 8
Q ss_pred CCccEEEEEEEEEcCCCcCCce
Q psy11549 221 DGTVLMRVVISGVNAKGRSLPV 242 (261)
Q Consensus 221 ~~~~~Y~~~~~a~N~~G~~~~s 242 (261)
.+...|.|+|.|.|..|.+...
T Consensus 166 ~~~~~Y~~~v~a~n~~G~~~s~ 187 (589)
T 3l5h_A 166 VYFVNIEVWVEAENALGKVTSD 187 (589)
T ss_dssp CSSSCEEECEEEEESSCCBCCC
T ss_pred chheeEEEEEEEEeCCCCcccc
Confidence 8999999999999999986543
No 409
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.36 E-value=1.1e-11 Score=100.05 Aligned_cols=155 Identities=13% Similarity=0.081 Sum_probs=106.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|++++|.|.+. .+ .+.|++++.. +. ..+ ..+....|.|.++...|.|.|.|...+. .... .
T Consensus 213 ~~v~~Gs~vtl~C~a~---~~-~I~W~~ng~~--i~--~~r--i~~~~~~L~I~nl~~sd~g~y~~~C~~~--~~i~--~ 278 (488)
T 2q7n_A 213 KVVLAGSNMTICCMSP---TK-VLSGQIGNTL--RP--LIH--LYGQTVAIHILNIPVSENSGTNIIFITD--DDVY--G 278 (488)
T ss_dssp CEEESSCCCEEEECCS---SC-EEEEEETTEE--CC--CEE--CSSSCEEEECCSCCCCCSSCEEEEEEES--SCEE--E
T ss_pred CEEcCCCCEEEEEECC---CC-EEEEEECCEE--Cc--hhh--ccceEEEEEEeCCCcccCCcEEEEEEcC--CeEE--E
Confidence 3467999999999998 23 8999998742 21 112 3455668999999999988888876632 2222 3
Q ss_pred EEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCC----CCeEEEEEEEeCCccceeEEEec---CCCCcEEEcCCCCC
Q psy11549 149 YQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGG----LPQTFTLELYSASDLNLLVNLTN---LDTPAFTLEDLGLD 221 (261)
Q Consensus 149 ~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~----~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~ 221 (261)
..+.+..+|.+|.++.........+.++|.++.+.+ ....|.+.++..+... .+.... .....+.+.. +.
T Consensus 279 ~~l~v~~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~g~~~-~c~~~~~~~~~~~~ct~~l--~~ 355 (488)
T 2q7n_A 279 TVVFAGYPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESISGKSA-VFHRIEGLTNETYRLGVQM--HP 355 (488)
T ss_dssp EEEEEECCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTTCCEE-EEECSSCCCSSCEEEEEEC--CS
T ss_pred EEEEeeCCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEECCCCC-CCccccccCCceEEEEEcC--CC
Confidence 455667899999999887767889999999876653 2356998876543321 221111 1224456554 33
Q ss_pred CccEEEEEEEEEcCCCcCC
Q psy11549 222 GTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 222 ~~~~Y~~~~~a~N~~G~~~ 240 (261)
....|.|+|.|.|.+|.+.
T Consensus 356 ~~t~Y~f~V~A~N~~G~~~ 374 (488)
T 2q7n_A 356 GQEIHNFTLTGRNPLGQAQ 374 (488)
T ss_dssp SCCCCEEEEEEEETTEEEE
T ss_pred CccEEEEEEEEEeCCCCcc
Confidence 3588999999999999843
No 410
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.36 E-value=2.2e-12 Score=95.25 Aligned_cols=119 Identities=17% Similarity=0.236 Sum_probs=70.4
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC---c-ceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeC-CC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG---E-ATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEAD-PP 88 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~---~-~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~ 88 (261)
.+|.|.+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+.........+..|+.+.|.|.+.+. |.
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~ 151 (238)
T 1bec_A 72 FSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPD 151 (238)
T ss_dssp EEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSC
T ss_pred EEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCC
Confidence 3899999999999999999988742 1 112335677764 33332111110123479999999999986 44
Q ss_pred CceeEEEEcCCccccccCCc---e-EEeCCce----eEEEEecCCCCc-CeEEEEEEEcCC
Q psy11549 89 ARSFKWKFNNSGETLDVGSE---R-FSSGSRG----SMLRYTPVTELD-YGTLSCAAQNAI 140 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~---~-~~~~~~~----~~l~i~~~~~~d-~g~y~C~~~~~~ 140 (261)
+..+.|++++.. +..... . ....+.. +.|.|......| .|.|+|.|.+..
T Consensus 152 ~~~v~W~~~g~~--~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 152 HVELSWWVNGKE--VHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp CEEEEEEETTEE--ECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred CcEEEEEECCEE--CCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 558999997742 211110 0 1111111 123333222223 678999999864
No 411
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.35 E-value=1.3e-11 Score=76.89 Aligned_cols=77 Identities=12% Similarity=0.047 Sum_probs=55.3
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|.+..+... +.+.+|+.+.|.|.+.+. ++ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.|.|
T Consensus 6 ~~~~~~~~~-~~v~~G~~v~l~C~v~~~-~~-~v~W~k~g~~i~-~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 6 IEVEKPLYG-VEVFVGETAHFEIELSEP-DV-HGQWKLKGQPLA-ASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCEEECCCC-EEEETTSCEEEEEEESSS-SC-CCEEEETTEECC-CBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred cEeeccCcc-eEEeCCCCEEEEEEECCC-CC-eEEEEECCEECc-CCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 334444444 678899999999999764 45 799999874221 12223334455566899999999999999999987
Q ss_pred C
Q psy11549 139 A 139 (261)
Q Consensus 139 ~ 139 (261)
.
T Consensus 82 ~ 82 (93)
T 1waa_A 82 T 82 (93)
T ss_dssp E
T ss_pred C
Confidence 4
No 412
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.35 E-value=7.6e-12 Score=84.96 Aligned_cols=120 Identities=14% Similarity=0.181 Sum_probs=63.4
Q ss_pred EEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccc-----cccCCceEE
Q psy11549 37 CSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGET-----LDVGSERFS 111 (261)
Q Consensus 37 C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~-----~~~~~~~~~ 111 (261)
|...+..|...+..+...+...|.........+.+..|++++|.|.+.+.+.+ .+.|++.+.... ......++.
T Consensus 16 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~-~i~W~~~~~~~i~~~~~~~~~~~r~~ 94 (145)
T 1z9m_A 16 HMDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDS-SLQWSNPAQQTLYFGEKRALRDNRIQ 94 (145)
T ss_dssp ----------------------CCTTCCBCCCEEEETTSCEEEEEECSCCTTC-CEEEECTTCCEEEETTEECSCCTTEE
T ss_pred hccCCCCCcCchHhHhhhheecccceecCCceEEEEcCCCEEEEEEEcCCCCc-EEEEECCCCcEEEECCceecccCCEE
Confidence 34455555543333333333333332222233788999999999999988866 899985321100 011222322
Q ss_pred ---eCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCC
Q psy11549 112 ---SGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPP 160 (261)
Q Consensus 112 ---~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p 160 (261)
.......|.|.++..+|+|.|+|.+.|. +.... .+.+.|..+|.+|
T Consensus 95 ~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~--~~~L~V~~~P~~P 143 (145)
T 1z9m_A 95 LVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTA--KSLVTVLGIPQKP 143 (145)
T ss_dssp EEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEE--EEEEEEECCCC--
T ss_pred EecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceE--EEEEEEEeCCCCC
Confidence 2334568999999999999999999998 66555 4445555677665
No 413
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.35 E-value=3.9e-12 Score=77.54 Aligned_cols=68 Identities=15% Similarity=0.288 Sum_probs=52.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcC
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNA 139 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~ 139 (261)
+.+..|+.+.|.|.+.+ |.| .+.|++++... .......+...+....|.|.++..+|+|.|+|.|.|.
T Consensus 6 v~~~~G~~v~l~C~vs~-p~p-~v~W~k~g~~l-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 73 (84)
T 2lu7_A 6 VRSTPGGDLELVVHLSG-PGG-PVRWYKDGERL-ASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD 73 (84)
T ss_dssp EEECTTSCEEEECCCSC-CST-TCEEEETTEEC-CCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT
T ss_pred EEEecCCCEEEEEEECC-CCc-EEEEEECCEEc-cccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE
Confidence 67889999999999865 666 79999987422 2223334445566678999999999999999998664
No 414
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.35 E-value=2.6e-11 Score=79.60 Aligned_cols=100 Identities=17% Similarity=0.294 Sum_probs=77.4
Q ss_pred EeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCC-cccee-E-EEecCCCCcEEEcCCCCCCccEEE
Q psy11549 152 VLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSAS-DLNLL-V-NLTNLDTPAFTLEDLGLDGTVLMR 227 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~i~~~~l~~~~~Y~ 227 (261)
....+|.+|.++.+.......+.|.|.++.+++.++ .|.++|+... ..... . .........++|.+ |.++..|.
T Consensus 13 ~~~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~--L~p~t~Y~ 90 (121)
T 1x4z_A 13 GRLSPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITG--LEKGISYK 90 (121)
T ss_dssp SSCCCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEES--CCTTCEEE
T ss_pred CcCCCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECC--CCCCCEEE
Confidence 445788999999998888999999999877777774 5999998765 22111 1 11234568899999 99999999
Q ss_pred EEEEEEcCCCcCCceeeee-eeecccc
Q psy11549 228 VVISGVNAKGRSLPVIWDD-FSMSGAH 253 (261)
Q Consensus 228 ~~~~a~N~~G~~~~s~~~~-~~~~~~~ 253 (261)
|+|.|.|..|.+.+|.... ++.+...
T Consensus 91 frV~A~n~~G~s~~S~~~~~v~~~~~~ 117 (121)
T 1x4z_A 91 FRVRALNMLGESEPSAPSRPYVVSGSG 117 (121)
T ss_dssp EEEEEEETTEECCCCCCCCCEECCSSC
T ss_pred EEEEEEcCCCcCCCcCCCCCEEcCCCC
Confidence 9999999999999998875 5444433
No 415
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.34 E-value=3.3e-12 Score=93.75 Aligned_cols=120 Identities=14% Similarity=0.113 Sum_probs=72.0
Q ss_pred eEEEccCCCCCCEeEEEEEEeC--CCc-ceeeeEEEEEEe---------eceeecCceeEEEeeCCCcEEEEEEEeeC-C
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINT--KGE-ATSNQLKLRVKY---------APICKSDRIVIVGASRSESVDIHCAVEAD-P 87 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~--~~~-~~s~~~~l~V~~---------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~ 87 (261)
+|.|.+++.+|+|.|.|.+.+. ... .....+.|.|.. +|...........+..|+.++|.|.+.+. |
T Consensus 80 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P 159 (230)
T 1ypz_F 80 ILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFP 159 (230)
T ss_dssp EEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESS
T ss_pred EEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecC
Confidence 8999999999999999999874 111 112345777762 12211000000123358899999999987 5
Q ss_pred CCceeEEEE-cCCccccccCCceEEeCC---ceeEEEEecCCCCcCeEEEEEEEcCCce
Q psy11549 88 PARSFKWKF-NNSGETLDVGSERFSSGS---RGSMLRYTPVTELDYGTLSCAAQNAIGT 142 (261)
Q Consensus 88 ~~~~~~W~~-~~~~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~g~y~C~~~~~~~~ 142 (261)
.+..+.|++ ++..............++ ..+.|.|..... + |.|+|.+.+....
T Consensus 160 ~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 160 DVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp CCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred CCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 445899998 553211000001111111 124678877665 4 9999999997653
No 416
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=1.4e-11 Score=78.90 Aligned_cols=97 Identities=7% Similarity=-0.007 Sum_probs=76.0
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
..+|.+|.++.+.......+.|.|.++.+++.++ .|.++++...... ..........+.|.+ |.+++.|.|+|.|
T Consensus 5 ~~~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~v~~--L~p~t~Y~frV~A 80 (106)
T 1x4x_A 5 SSGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM--QICYCGPGLSYEIKG--LSPATTYYCRVQA 80 (106)
T ss_dssp CCSCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC--CEEEEESCSEEEEES--CCSSCEEEEEEEE
T ss_pred CCCcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce--EEEEeCCcceEEEcC--CCCCCEEEEEEEE
Confidence 3578888888888788999999999877666564 4999987654332 122223457899999 9999999999999
Q ss_pred EcCCCcCCceeeeeeeeccccc
Q psy11549 233 VNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
.|..|.+.+|..+.+.+....+
T Consensus 81 ~n~~G~g~~S~~v~~~T~~~~P 102 (106)
T 1x4x_A 81 LSVVGAGPFSEVVACVTPPSSG 102 (106)
T ss_dssp ECSSCCCCBCCCEEEECCCCCS
T ss_pred EcCCcCCCCcCCEEEECCCCCc
Confidence 9999999999998888765544
No 417
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.34 E-value=1.7e-12 Score=96.75 Aligned_cols=117 Identities=19% Similarity=0.170 Sum_probs=70.7
Q ss_pred EEEccCCCCCCEeEEEEEEeCCC---c--ceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeC-CCC
Q psy11549 22 LVLQKVSRQSAGTYKCSAINTKG---E--ATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEAD-PPA 89 (261)
Q Consensus 22 L~i~~~~~~D~G~Y~C~~~~~~~---~--~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~ 89 (261)
|.|.+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+.........+..|+.++|.|.+.+. |.+
T Consensus 76 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~ 155 (253)
T 3to4_D 76 LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDH 155 (253)
T ss_dssp CEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSC
T ss_pred EEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCc
Confidence 99999999999999999987643 1 112334677753 22222110000112246899999999985 445
Q ss_pred ceeEEEEcCCccccccCCceE----E-----eCCc---eeEEEEecCCCCc-CeEEEEEEEcCC
Q psy11549 90 RSFKWKFNNSGETLDVGSERF----S-----SGSR---GSMLRYTPVTELD-YGTLSCAAQNAI 140 (261)
Q Consensus 90 ~~~~W~~~~~~~~~~~~~~~~----~-----~~~~---~~~l~i~~~~~~d-~g~y~C~~~~~~ 140 (261)
..+.|++++.. +....... . .++. .+.|.|.....+| .|.|+|.|.+..
T Consensus 156 i~v~W~k~g~~--l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 156 VELSWWVNGKE--VHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEEEEETTEE--ECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EEEEEEECCEE--CCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 58999997642 21111000 0 0111 1357777766666 779999999864
No 418
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.34 E-value=8.4e-12 Score=90.60 Aligned_cols=164 Identities=13% Similarity=0.193 Sum_probs=91.0
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc---------------cCCceEEe----CCceeEEEEecCCCCc
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD---------------VGSERFSS----GSRGSMLRYTPVTELD 128 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~---------------~~~~~~~~----~~~~~~l~i~~~~~~d 128 (261)
+.+..|++++|.|.+.+.+. ...+.|++...+.... ....++.. ......|.|.++..+|
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 10 GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp CEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 45779999999999987652 2379999864221110 01223332 2234589999999999
Q ss_pred CeEEEEEEEcCCce---EEeeEEEEEEeCCCCCCCCcceEE----eecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccc
Q psy11549 129 YGTLSCAAQNAIGT---QVTPCLYQVVLAGKPQPPQNCSVR----NETTSSVHISCTPGYDGGLPQT-FTLELYSASDLN 200 (261)
Q Consensus 129 ~g~y~C~~~~~~~~---~~~~~~~~v~~~~~p~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~ 200 (261)
+|.|.|.+.+..+. ......+.|.. .+|.+|...... ...|..++|.|.+ .+..|.. .+.|++......
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~L~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~~ 166 (215)
T 1c5d_H 90 TAIYFCTREDGWNYFDYWGPGTMVTVSS-AQTTAPSVYPLAPGCGDTTSSTVTLGCLV--KGYFPEPVTVTWNSGALSSD 166 (215)
T ss_dssp CEEEEEEECCSSSCSCCBCCCEEEEECS-SCCBCCCEEEECCCSSCCCCSSEEEEEEE--EEEBSSCCEEEEGGGTTCCS
T ss_pred CEEEEEEEecCCcccceEcCCEEEEecC-CCCCCCeEEeccCChhhccCCcEEEEEEE--eeeEcCCcEEEEccCCccCc
Confidence 99999999986421 11222444432 233334322111 1358899999997 4443533 333433332211
Q ss_pred e-eE-EEecCCCCcEE----EcCCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 201 L-LV-NLTNLDTPAFT----LEDLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 201 ~-~~-~~~~~~~~~~~----i~~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
. .. ..... ..+. |......+ +.| +|.|.|..|...
T Consensus 167 ~~~~~~~~~~--g~~~~~s~L~~~~~~~-g~y--tC~v~n~~~~~~ 207 (215)
T 1c5d_H 167 VHTFPAVLQS--GLYTLTSSVTSSTWPS-QTV--TCNVAHPASSTK 207 (215)
T ss_dssp CCBCCCEEET--TEEEEEEEEEESSTTT-SCC--EEEEEEGGGTEE
T ss_pred eEecCcccCC--CCEEEEEEEecccCCC-CeE--EEEEEeCCCCcc
Confidence 0 00 01111 2222 22322344 889 999999998643
No 419
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.34 E-value=1.6e-11 Score=76.90 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=57.4
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.| + .+.|++++.. +.. ..++.... ..|.|.++..+|+|.|+|.|.|..|.......
T Consensus 19 ~~v~~G~~v~l~C~~~g~p-p-~i~W~k~g~~--~~~-~~~~~~~~--~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 91 (95)
T 2ckn_A 19 LLVHPGDLLQLRCRLRDDV-Q-SINWLRDGVQ--LVE-SNRTRITG--EEVEVRDSIPADSGLYACVTSSPSGSDTTYFS 91 (95)
T ss_dssp EEECTTSCEEEECCEESSC-C-EEEEEBTTBC--CCC-CSSEEECS--SEEEESSCCGGGSEEEEEEEEETTEEEEEEEE
T ss_pred EEEcCCCeEEEEEECCCCC-C-ceEEEECCEe--cCC-CCCEEEeC--CEEEECCCChHHCEEEEEEeccCCCcEEEEEE
Confidence 6788999999999999986 5 8999997642 222 22344433 37999999999999999999999888766433
Q ss_pred E
Q psy11549 149 Y 149 (261)
Q Consensus 149 ~ 149 (261)
+
T Consensus 92 l 92 (95)
T 2ckn_A 92 V 92 (95)
T ss_dssp E
T ss_pred E
Confidence 3
No 420
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.34 E-value=6.3e-12 Score=77.86 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=56.4
Q ss_pred eceeecCcee-EEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 58 APICKSDRIV-IVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 58 ~p~~~~~~~~-~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
|+.+..+... .+.+..|+.+.|.|.+.+ |.+ .+.|++++... .......+...+....|.|.++..+|+|.|+|.|
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~-~v~W~k~g~~i-~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDA-PVRWYKDGQEV-EESDFVVLENEGPHRRLVLPATQPSDGGEFQCVA 80 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTS-CCEEEETTSCC-CCCSSCEEEEETTEEEEEESSCCGGGCSEEEEEC
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCc-EEEEEECCEEe-eeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEE
Confidence 3444444322 255678999999999865 656 79999988532 2223334455666678999999999999999999
Q ss_pred EcC
Q psy11549 137 QNA 139 (261)
Q Consensus 137 ~~~ 139 (261)
.|.
T Consensus 81 ~n~ 83 (91)
T 2lvc_A 81 GDE 83 (91)
T ss_dssp SSC
T ss_pred cce
Confidence 764
No 421
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=5.6e-12 Score=80.40 Aligned_cols=76 Identities=11% Similarity=0.164 Sum_probs=55.4
Q ss_pred eecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 61 CKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 61 ~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
+...... ..+.+|+.+.|.|.+.+.+.+..+.|++++.... ......+...+....|.|.++..+|+|.|+|.+.+
T Consensus 11 ~~~~~~~-~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~-~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 86 (104)
T 2eny_A 11 ITKRLKT-MEVLEGESCSFECVLSHESASDPAMWTVGGKTVG-SSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRG 86 (104)
T ss_dssp CSBCCCC-EEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCS-BCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETT
T ss_pred EEecCCC-cEEcCCCcEEEEEEEcCCCCCceeEEEECCEECC-CCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECC
Confidence 3333333 7788999999999999877544799999875322 22223334455566899999999999999999865
No 422
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.33 E-value=6.8e-12 Score=93.64 Aligned_cols=121 Identities=13% Similarity=0.132 Sum_probs=72.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC---------c-ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG---------E-ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEAD 86 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~---------~-~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~ 86 (261)
+|+|.+++.+|+|.|+|.+.+..+ . .......|.|.. +|.+...... ..+..|+.++|.|.+.+.
T Consensus 103 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~C~~~~~ 181 (256)
T 3sob_H 103 YLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDY 181 (256)
T ss_dssp EEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC------TTEEEEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCC-cccccCCcEEEEEEEEEE
Confidence 499999999999999999986531 1 112335677752 2333211111 234589999999999885
Q ss_pred CC-CceeEEEEcCCccccccCCc-eEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 87 PP-ARSFKWKFNNSGETLDVGSE-RFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 87 ~~-~~~~~W~~~~~~~~~~~~~~-~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
.+ +..+.| ++.......... .....+ ..+.|.|.....+| |.|+|.+.+..+....
T Consensus 182 ~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~ 243 (256)
T 3sob_H 182 FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 243 (256)
T ss_dssp BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEE
T ss_pred ECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcce
Confidence 44 558999 432211100000 011111 12468889888889 9999999997765444
No 423
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.33 E-value=2.9e-12 Score=95.44 Aligned_cols=120 Identities=14% Similarity=0.168 Sum_probs=72.7
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC--cceeeeEEEEEEe------eceeecCceeEEEeeCCCcEEEEEEEeeC-CCCc
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG--EATSNQLKLRVKY------APICKSDRIVIVGASRSESVDIHCAVEAD-PPAR 90 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~--~~~s~~~~l~V~~------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~-~~~~ 90 (261)
.+|.|.+++.+|+|.|+|.+.+... ........|.|.. +|.+.........+..|+.++|.|.+.+. |.+.
T Consensus 76 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~ 155 (252)
T 1oga_E 76 FPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHV 155 (252)
T ss_dssp CCEEECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCE
T ss_pred EEEEECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCc
Confidence 5899999999999999999988621 1112234577753 33322111000112368999999999986 4445
Q ss_pred eeEEEEcCCccccccCCceEE---------eCCc----eeEEEEecCCCC-cCeEEEEEEEcCCce
Q psy11549 91 SFKWKFNNSGETLDVGSERFS---------SGSR----GSMLRYTPVTEL-DYGTLSCAAQNAIGT 142 (261)
Q Consensus 91 ~~~W~~~~~~~~~~~~~~~~~---------~~~~----~~~l~i~~~~~~-d~g~y~C~~~~~~~~ 142 (261)
.+.|++++.. +.... ... ..+. .+.|.|...... +.+.|+|.+.+....
T Consensus 156 ~v~W~~~g~~--l~~~~-~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 156 ELSWWVNGKE--VHSGV-STDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEEEEETTEE--ECSSE-EECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEEECCEE--CCCCc-ccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 8999997742 21111 100 0111 224667655443 578999999997543
No 424
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.33 E-value=1.2e-11 Score=86.61 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=78.1
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCC--ceeEEEEcC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPA--RSFKWKFNN 98 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~--~~~~W~~~~ 98 (261)
.|.|.+++. | |.|.|.+... +...+..+.|+|..+|...........+.+|+.++|.|.+.+..++ ..|.|++++
T Consensus 51 ~l~l~~vs~-~-g~y~C~~~c~-~~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~ 127 (185)
T 1iam_A 51 VYELSNVQE-D-SQPMCYSNCP-DGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGE 127 (185)
T ss_dssp EEEEEEECS-C-BCCEEEEECS-SCEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETT
T ss_pred EEEEEecCc-C-CEEEEEEECC-CCceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCC
Confidence 689999983 4 9999998554 4445778999998777654333221337799999999999997664 258999977
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
..... ...........|.+.....+|...|+|.|.+..+
T Consensus 128 ~~l~~----~~~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 128 KELKR----EPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp EEEEE----EECCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred EEccc----ccCCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 42111 1111122233577766666666699999998765
No 425
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.33 E-value=1.4e-11 Score=91.02 Aligned_cols=165 Identities=12% Similarity=0.062 Sum_probs=90.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc--------------cCCceEEe---CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD--------------VGSERFSS---GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~--------------~~~~~~~~---~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+.+|+.+.|.|.+.+ +.+ .+.|++...+.... ....++.. ......|.|.++..+|+|.
T Consensus 12 v~v~~G~~v~L~C~~~~-~~~-~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~ 89 (240)
T 3q5y_A 12 IIKEKGGRSVLTCIPIS-GHS-NVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAM 89 (240)
T ss_dssp EEEETTCCEEEEEECCT-TCC-EEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEE
T ss_pred eeecCCCcEEEEEEeCC-CCc-eEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEE
Confidence 66889999999999875 445 89999833211100 00112222 2335579999999999999
Q ss_pred EEEEEEcC--C-ceEEeeEEEEEEeC-CCCCCCCcceEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccc
Q psy11549 132 LSCAAQNA--I-GTQVTPCLYQVVLA-GKPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLN 200 (261)
Q Consensus 132 y~C~~~~~--~-~~~~~~~~~~v~~~-~~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~ 200 (261)
|.|.+.+. . ........+.+... ..+.+|.. .+.. ..|..++|.|.+ .+..|.. ...|+++.....
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~-~~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 90 YFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKV-SLFEPSKAEIANKQKATLVCLA--RGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp EEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEE-EEECCCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEccCCCcceEEcCCEEEEEeccccCCCCCee-EEeCCchhhcccCCceEEEEEE--eeEECCCeEEEEEECCEECc
Confidence 99999832 1 12222223444321 12233321 2211 237899999997 3434433 233444332211
Q ss_pred eeEEE----ecCCC------CcEEEcCCCCCC-ccEEEEEEEEEcCCCcCC
Q psy11549 201 LLVNL----TNLDT------PAFTLEDLGLDG-TVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 201 ~~~~~----~~~~~------~~~~i~~~~l~~-~~~Y~~~~~a~N~~G~~~ 240 (261)
..... ..... ..+.|......+ ++.| +|.|.|......
T Consensus 167 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~Y--tC~v~~~~~~~~ 215 (240)
T 3q5y_A 167 SGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHF--RCQVQFHGLSEE 215 (240)
T ss_dssp TTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEE--EEEEEECCBCTT
T ss_pred CcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEE--EEEEEcCCCCCc
Confidence 00000 00011 236666644556 6799 999999876443
No 426
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.33 E-value=1.1e-11 Score=78.96 Aligned_cols=83 Identities=19% Similarity=0.196 Sum_probs=57.8
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccC--CceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVG--SERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 146 (261)
+.+..|+.+.|.|.+.+ +.+ .+.|++++..... .. ...+...+....|.|.++..+|+|.|+|.+.| ...
T Consensus 17 ~~v~~G~~v~l~C~~~~-~~~-~v~W~k~g~~l~~-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~- 88 (103)
T 1x44_A 17 TTAYCGERVELECEVSE-DDA-NVKWFKNGEEIIP-GPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQS- 88 (103)
T ss_dssp EEEETTEEEEEEEECSS-SSC-CCEEEETTEECCC-STTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEE-
T ss_pred EEEECCCCEEEEEEecC-CCC-eEEEEECCEECCC-CCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcE-
Confidence 67889999999999977 555 8999998742211 11 11333444556899999999999999999987 233
Q ss_pred EEEEEEeCCCCCCC
Q psy11549 147 CLYQVVLAGKPQPP 160 (261)
Q Consensus 147 ~~~~v~~~~~p~~p 160 (261)
...+.|..+|.++
T Consensus 89 -~~~l~V~~~p~p~ 101 (103)
T 1x44_A 89 -SAKLSVDLKSGPS 101 (103)
T ss_dssp -EEEEEEECCCSCC
T ss_pred -EEEEEEeCCCCCC
Confidence 3344444555443
No 427
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=2.2e-11 Score=78.29 Aligned_cols=96 Identities=10% Similarity=0.036 Sum_probs=75.8
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
..|.+|.++.+.......+.|.|.++...+.++ .|.+.|+..................+.|.+ |.++..|.|+|.|.
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~l~~--L~p~t~Y~~~V~A~ 83 (108)
T 2djs_A 6 SGPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDG--LRPGMVYVVQVRAR 83 (108)
T ss_dssp CCCCCCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEESSSEEEEES--CCTTCEEEEEEEEE
T ss_pred CCCCCCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEecCccEEEEcC--CCCCCEEEEEEEEE
Confidence 567888899988888999999999865554554 499998876543222223334558899999 99999999999999
Q ss_pred cCCCcCCceeeeeeeeccc
Q psy11549 234 NAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 234 N~~G~~~~s~~~~~~~~~~ 252 (261)
|..|.+.+|..+.+++...
T Consensus 84 n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 84 TVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp ESSCEEEECCCEEEECCCS
T ss_pred eCCEECCCCCCEEEEeCCC
Confidence 9999999999988877644
No 428
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.33 E-value=4.9e-11 Score=75.14 Aligned_cols=76 Identities=18% Similarity=0.326 Sum_probs=56.8
Q ss_pred EEeeCCCcEEEEEEEe-eCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeE
Q psy11549 69 VGASRSESVDIHCAVE-ADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC 147 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~ 147 (261)
..+..|+++.|.|.+. +.|.+ .+.|++++.... ....+... ..|.|.++..+|+|.|+|.+.|..|......
T Consensus 20 ~~v~~G~~v~l~C~~~~~~p~~-~v~W~k~~~~~~---~~~~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 92 (98)
T 1gl4_B 20 QSVRPGADVTFICTAKSKSPAY-TLVWTRLHNGKL---PSRAMDFN---GILTIRNVQPSDAGTYVCTGSNMFAMDQGTA 92 (98)
T ss_dssp EEECTTCCEEEEEEEEESSSCC-EEEEEEGGGBCC---CTTEEEET---TEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEecCCCEEEEEeCCCCCCCc-EEEEEeCCCCCC---CceeecCC---CEEEEeCCChhhCEEEEEEecCCCCccccEE
Confidence 6788999999999998 46666 899999753221 11222222 2699999999999999999999998877654
Q ss_pred EEEE
Q psy11549 148 LYQV 151 (261)
Q Consensus 148 ~~~v 151 (261)
.+.|
T Consensus 93 ~l~V 96 (98)
T 1gl4_B 93 TLHV 96 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 429
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=7.1e-12 Score=80.99 Aligned_cols=82 Identities=17% Similarity=0.101 Sum_probs=58.2
Q ss_pred EEeeCCCcEEEEEEEeeC---CCCceeEEEEcCCcccccc-CCceEEe----CC----ceeEEEEecCCCCcCeEEEEEE
Q psy11549 69 VGASRSESVDIHCAVEAD---PPARSFKWKFNNSGETLDV-GSERFSS----GS----RGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~---~~~~~~~W~~~~~~~~~~~-~~~~~~~----~~----~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+.+.+|+.++|.|.+.+. |.| .+.|+++.. ..+.. ...++.. .. ....|.|.++..+|+|.|+|++
T Consensus 22 v~V~eG~~v~L~C~v~g~~~~p~P-~V~W~Kgk~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cev 99 (118)
T 2edn_A 22 VSVETGKDAVVVAKVNGKELPDKP-TIKWFKGKW-LELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEV 99 (118)
T ss_dssp CEEETTSCEECCEEEETTTSSSCC-CCEEEETTT-CCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEE
T ss_pred eEEeCCCCEEEEEEEeccCCCCCC-cEEEeeCCE-eccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEE
Confidence 678899999999999875 456 899999641 11111 1122222 11 1468999999999999999999
Q ss_pred EcCCceEEeeEEEEEE
Q psy11549 137 QNAIGTQVTPCLYQVV 152 (261)
Q Consensus 137 ~~~~~~~~~~~~~~v~ 152 (261)
.|..|..+....|.|.
T Consensus 100 sn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 100 KAKDTCDSCGFNIDVE 115 (118)
T ss_dssp ECSSCEEEEEECCEEE
T ss_pred EEcCCcEEEEEEEEEE
Confidence 9999976665454443
No 430
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.32 E-value=7.9e-12 Score=91.49 Aligned_cols=120 Identities=14% Similarity=0.149 Sum_probs=73.2
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC-------c-ceeeeEEEEEEe----eceeecCceeEEEeeCCCcEEEEEEEeeCCC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG-------E-ATSNQLKLRVKY----APICKSDRIVIVGASRSESVDIHCAVEADPP 88 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~-------~-~~s~~~~l~V~~----~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 88 (261)
+|.|.+++.+|+|.|.|.+.+..+ . .......|.|.. +|.+...... .....|+.+.|.|.+.+..+
T Consensus 80 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~-~~~~~g~~~~l~C~~~~~~p 158 (226)
T 3mlr_H 80 YLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFP 158 (226)
T ss_dssp EEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEE-ECSTTSSEEEEEEEEEEEBS
T ss_pred EEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCc-ccccCCCCEEEEEEEEEEEC
Confidence 599999999999999999976431 0 111234566642 2333211111 23458999999999988644
Q ss_pred -CceeEEEEcCCccccccCC-ceEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceEE
Q psy11549 89 -ARSFKWKFNNSGETLDVGS-ERFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQV 144 (261)
Q Consensus 89 -~~~~~W~~~~~~~~~~~~~-~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~ 144 (261)
+..+.| ++......... ......+ ..+.|.|.....+| |.|+|.+.+..+...
T Consensus 159 ~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~ 217 (226)
T 3mlr_H 159 EPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 217 (226)
T ss_dssp SCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEE
T ss_pred CCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcC
Confidence 558999 33222111000 0011111 12368888888888 999999999766543
No 431
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.32 E-value=1.3e-11 Score=91.94 Aligned_cols=174 Identities=13% Similarity=0.107 Sum_probs=96.6
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.. ....+.|++...+.... ....++.. ......|.|.++..+
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (253)
T 3liz_H 10 GLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSE 89 (253)
T ss_dssp CEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGG
T ss_pred EEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 5577999999999998633 22379999853221110 00122222 134557999999999
Q ss_pred cCeEEEEEEEcCC----ceEEeeEEEEEEeCCCCCCCCcce----EEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCc
Q psy11549 128 DYGTLSCAAQNAI----GTQVTPCLYQVVLAGKPQPPQNCS----VRNETTSSVHISCTPGYDGGLPQT-FTLELYSASD 198 (261)
Q Consensus 128 d~g~y~C~~~~~~----~~~~~~~~~~v~~~~~p~~p~~~~----v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~ 198 (261)
|+|.|.|.+.+.. ........+.|.. ..+.+|.... .....|..++|.|.+ .+..|.. ...|++....
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~~~~ 166 (253)
T 3liz_H 90 DTAMYYCTRDPAGRAWFAYWGQGTLVTVSA-AKTTPPSVYPLAPGSAAQTNSMVTLGCLV--KGYFPEPVTVTWNSGSLS 166 (253)
T ss_dssp GCEEEEEEECCBTTTBCCEECCCEEEEECS-SCCBCCEEEEECC------CCEEEEEEEE--EEEBSSCCEEEEGGGTBC
T ss_pred hCEEEEEEEecCCcceeeEECCCEEEEEec-cCCCCCeEEEecCCcccCCCCcEEEEEEE--eeEeCCCeEEEEEeCCee
Confidence 9999999998752 2222222333331 3333332211 112358999999997 3434433 2333333321
Q ss_pred cceeE--EEecC----CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 199 LNLLV--NLTNL----DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 199 ~~~~~--~~~~~----~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
..... ..... ....+.|......+ |.| +|.|.|..+.......+.+.
T Consensus 167 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~y--tC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 167 SGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETV--TCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp TTEEECCCEEETTEEEEEEEEEEETTSTTT-SCC--EEEEEEGGGTEEEEEECCCC
T ss_pred cceEeCCccccCCeEEEEEEEEEcHHHCCC-ceE--EEEEEECCCCcceEEEecCc
Confidence 11000 00100 11457788877778 999 99999999865555444443
No 432
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.32 E-value=5.1e-09 Score=79.44 Aligned_cols=210 Identities=10% Similarity=0.016 Sum_probs=133.2
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCC-ceeEEEEcC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPA-RSFKWKFNN 98 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~-~~~~W~~~~ 98 (261)
.++.|.++...-.-.|+..|.|..|..... ...+...+....+............+.|.+.....+.. -.+.|...+
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s--~~~~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~ 151 (290)
T 3r8q_A 74 SSVVVSGLMVATKYEVSVYALKDTLTSRPA--QGVVTTLENVSPPRRARVTDATETTITISWRTKTETITGFQVDAVPAN 151 (290)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECCCE--EEEEECCCCCCCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESS
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCCCCCc--ceeEecCCCCCCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECC
Confidence 478888887777777777788877654222 22232211112222222333456677777766432221 134443322
Q ss_pred CccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEee
Q psy11549 99 SGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCT 178 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~ 178 (261)
.. .............+.+.++.....+.|...+.+..|.... ..+.....|.+|.++.+.......+.|.|.
T Consensus 152 ~~-----~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~---~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~ 223 (290)
T 3r8q_A 152 GQ-----TPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSP---VVIDASTAIDAPSNLRFLATTPNSLLVSWQ 223 (290)
T ss_dssp SC-----CCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCC---EEEEEECCCCCCEEEEEEEEETTEEEEEEE
T ss_pred CC-----cceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCC---EEEEecCCCCCCCccEEEeeCCCEEEEEEe
Confidence 11 1112223334457899999999989999999987665433 234444668888888888788999999999
Q ss_pred cCCCCCCCeEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCcee
Q psy11549 179 PGYDGGLPQTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVI 243 (261)
Q Consensus 179 ~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~ 243 (261)
++ .+....|.+.|+..+...... .........+.|.+ |.++..|.|+|.|.|..|.+++..
T Consensus 224 ~p--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~~~~g~s~p~~ 285 (290)
T 3r8q_A 224 PP--RARITGYIIKYEKPGSPPREVVPRPRPGVTEATITG--LEPGTEYTIYVIALKNNQKSEPLI 285 (290)
T ss_dssp CC--SSCCCEEEEEEECTTSCCEECSSCCCTTCCEEEECS--CCTTCEEEEEEEEEETTEECCCEE
T ss_pred CC--CCcccEEEEEEEeCCCCcceeEeccCCCccEEEECC--CCCCCEEEEEEEEEeCCCcCCccc
Confidence 73 344456999888765543222 12234567899999 999999999999999999887654
No 433
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.32 E-value=9.9e-12 Score=82.38 Aligned_cols=104 Identities=23% Similarity=0.257 Sum_probs=77.3
Q ss_pred EEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE---EEecCCCCcEEEcCCCCCCc
Q psy11549 148 LYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV---NLTNLDTPAFTLEDLGLDGT 223 (261)
Q Consensus 148 ~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~l~~~ 223 (261)
.+.+.+..+|.+|.++.+.......+.|.|.++.+++.++. |.+.|+........| ......... .|.+ |.++
T Consensus 8 ~~~~~v~~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~-~i~~--L~p~ 84 (127)
T 1uey_A 8 PTPAPVYDVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTT-AQLN--LSPY 84 (127)
T ss_dssp CCCCCCCCSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCE-EEEC--CCTT
T ss_pred EEEEEeecCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeeeCCCceE-EEec--CCCC
Confidence 34466678999999999988889999999998777777765 999988754322233 112223333 5778 9999
Q ss_pred cEEEEEEEEEcCCCcCCceeee-eeeeccccc
Q psy11549 224 VLMRVVISGVNAKGRSLPVIWD-DFSMSGAHY 254 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G~~~~s~~~-~~~~~~~~~ 254 (261)
+.|.|+|.|.|..|.+.+|... .+++....+
T Consensus 85 t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P 116 (127)
T 1uey_A 85 VNYSFRVMAVNSIGKSLPSEASEQYLTKASEP 116 (127)
T ss_dssp CEECCEEEEEESSCBCCCCSCCCCEECCCSSC
T ss_pred CEEEEEEEEEeCCccCCccccccceEcCCCCC
Confidence 9999999999999999999884 555554443
No 434
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.31 E-value=1e-11 Score=89.60 Aligned_cols=160 Identities=11% Similarity=0.037 Sum_probs=88.5
Q ss_pred eeCCCcEEEEEEEeeCC---CCceeEEEEcCCccccccCCceEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceE
Q psy11549 71 ASRSESVDIHCAVEADP---PARSFKWKFNNSGETLDVGSERFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~~---~~~~~~W~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 143 (261)
+..|+.++|.|.+.+.+ .+..+.|++++................ ..+.|.|.++..+|+|.|+|.+.+..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 56899999999999874 344899999873211000000000111 12468999999999999999999987643
Q ss_pred EeeEEEEE--EeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeEE--EecCCCCcE
Q psy11549 144 VTPCLYQV--VLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLVN--LTNLDTPAF 213 (261)
Q Consensus 144 ~~~~~~~v--~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ 213 (261)
.....+.+ .+..+| . +.+.. ..|..+.|.|.+ .+..|.. .+.|+++......... .....+..|
T Consensus 95 ~~~~~v~~~~~~~~~P---~-v~~~~~~~~~~~g~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~ 168 (207)
T 2vol_A 95 PIEKTISKTKGRPKAP---Q-VYTLPPPKEQMAKDKVSLTCMI--TDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSY 168 (207)
T ss_dssp CEEEEECCCCCCCBCC---E-EEEECCCTGGGSSSEEEEEEEE--EEEBSSCCEEEEEETTEECSCEEECCCEECTTSCE
T ss_pred ceEEEeccCCCCCcCC---e-EEEeCCCHHHhcCCceEEEEEE--eeEECCCCEEEEEECCEeccCcccCCceECCCCCE
Confidence 22112222 222222 2 11211 237899999997 4434442 3344454332211111 111222333
Q ss_pred E------EcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 214 T------LEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 214 ~------i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
. |......++|.| +|.|.|....
T Consensus 169 ~~~s~l~i~~~~~~~~g~y--tC~a~n~~l~ 197 (207)
T 2vol_A 169 FVYSKLNVQKSNWEAGNTF--TCSVLHEGLH 197 (207)
T ss_dssp EEEEEEEEEHHHHSSCCEE--EEEEECTTSG
T ss_pred EEEEEEEECHHHcCCCCEE--EEEEECCCCC
Confidence 3 333112467899 9999998754
No 435
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.31 E-value=2.6e-10 Score=82.63 Aligned_cols=131 Identities=16% Similarity=0.103 Sum_probs=93.6
Q ss_pred eEEEEecC-CCCcCeEEEEEEEcCCceEEe-eEEEEEEeCCCCCCCCcceEEee--cCCeEEEEeecCCCCCC-CeEEEE
Q psy11549 117 SMLRYTPV-TELDYGTLSCAAQNAIGTQVT-PCLYQVVLAGKPQPPQNCSVRNE--TTSSVHISCTPGYDGGL-PQTFTL 191 (261)
Q Consensus 117 ~~l~i~~~-~~~d~g~y~C~~~~~~~~~~~-~~~~~v~~~~~p~~p~~~~v~~~--~~~~~~l~c~~~~~~~~-p~~~~~ 191 (261)
..+.|.++ .....+.|++.|.|..|.... ...+......+|.+|.++.+... ....+.|+|.++...+. ...|.+
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v 141 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVTSDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNI 141 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEECCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEE
T ss_pred ceEEEcCCccccccEEEEEEEEecccCccCCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEE
Confidence 46788888 788888999999999887653 11222222346888888887653 57899999997544333 456999
Q ss_pred EEEeCCccceeEEEe-----cCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCC---ceeeeeeeecc
Q psy11549 192 ELYSASDLNLLVNLT-----NLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSL---PVIWDDFSMSG 251 (261)
Q Consensus 192 ~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~---~s~~~~~~~~~ 251 (261)
.|+..... .|... ......++|.+ |.+++.|.|+|+|.|..|.+. +|..+.+.+..
T Consensus 142 ~y~~~~~~--~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 142 QYRTKDAS--TWSQIPPEDTASTRSSFTVQD--LKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEETTCS--SCEECCGGGGCSCCSEEEECS--CCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEccCCCC--CceEeccccccCccceEEeCC--CCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 99886543 23221 34567899999 999999999999999999755 55555555543
No 436
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.31 E-value=4.1e-12 Score=95.11 Aligned_cols=121 Identities=15% Similarity=0.148 Sum_probs=70.5
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCC------c-ceeeeEEEEEE----eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKG------E-ATSNQLKLRVK----YAPICKSDRIVIVGASRSESVDIHCAVEADPP- 88 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~------~-~~s~~~~l~V~----~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 88 (261)
+|.|.+++.+|+|.|+|.+.+..+ . .......|.|. .+|.+...... ..+..|+.++|.|.+.+.++
T Consensus 79 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g~~~~L~C~~~~~~P~ 157 (263)
T 3iu4_H 79 FLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPS-SKGSTSGTAALGCLVKDYFPE 157 (263)
T ss_dssp EEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCC-CCC----EEEEEEEEEEEBSS
T ss_pred EEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCc-cccccCCcEEEEEEEEeEeCC
Confidence 499999999999999999987531 1 11223466764 23333311111 12347899999999988654
Q ss_pred CceeEEEEcCCccccccCCc-eEEeCC----ceeEEEEecCCCCcCeEEEEEEEcCCceEEe
Q psy11549 89 ARSFKWKFNNSGETLDVGSE-RFSSGS----RGSMLRYTPVTELDYGTLSCAAQNAIGTQVT 145 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~-~~~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~ 145 (261)
+..+.| ++.......... .....+ ..+.|.|.....+| |.|+|.+.+..+....
T Consensus 158 ~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~ 216 (263)
T 3iu4_H 158 PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKV 216 (263)
T ss_dssp CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEE
T ss_pred ceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcce
Confidence 358999 432211100000 011111 12368888887788 9999999997765433
No 437
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.31 E-value=2.5e-11 Score=77.93 Aligned_cols=81 Identities=14% Similarity=0.254 Sum_probs=57.8
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCcccc-----ccCCceEEe---CCceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETL-----DVGSERFSS---GSRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~-----~~~~~~~~~---~~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+.+..|+++.|.|.+.+.+.+ .+.|++++..... .....++.. ......|.|.++..+|+|.|+|.+.| .
T Consensus 16 ~~v~~G~~v~L~C~~~~~~~~-~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~ 93 (108)
T 3m45_A 16 VTVVEGGTAILTCRVDQNDNT-SLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-M 93 (108)
T ss_dssp EEEETTSCEEEEEEESSCSSC-CEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-S
T ss_pred eEEEeCCcEEEEeEEcCCCcc-EEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-C
Confidence 678899999999999998876 7999987641111 011223322 22456899999999999999999999 6
Q ss_pred ceEEeeEEEEE
Q psy11549 141 GTQVTPCLYQV 151 (261)
Q Consensus 141 ~~~~~~~~~~v 151 (261)
+.......+.|
T Consensus 94 ~~~~~~~~L~V 104 (108)
T 3m45_A 94 PVKTSKAYLTV 104 (108)
T ss_dssp SCEEEEEEEEE
T ss_pred CCcEEEEEEEE
Confidence 66665444433
No 438
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.31 E-value=3.1e-11 Score=78.86 Aligned_cols=98 Identities=18% Similarity=0.109 Sum_probs=76.9
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVIS 231 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~ 231 (261)
...|.+|.++.+.......+.|.|.++.+++.++. |.++++..... ..| .........++|.+ |.+++.|.|+|.
T Consensus 15 ~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~v~~--L~p~t~Y~frV~ 91 (118)
T 1x3d_A 15 SCEPDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN-GEFCQCYMGSQKQFKITK--LSPAMGCKFRLS 91 (118)
T ss_dssp CSCCCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS-SCCEEEEEESCSEEEEES--CCTTCEEEEECC
T ss_pred CCCCcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC-CCeEEeeccCCcEEEeCC--CCCCCEEEEEEE
Confidence 35788888888888889999999998776677755 88888765442 123 22333458899999 999999999999
Q ss_pred EEcCCCcCCceeeeeeeeccccc
Q psy11549 232 GVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 232 a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
|.|..|.+.+|..+.+.+....+
T Consensus 92 A~n~~G~s~~S~~~~~~T~~~~P 114 (118)
T 1x3d_A 92 ARNDYGTSGFSEEVLYYTSGCSG 114 (118)
T ss_dssp EEESSCBCCCCCCEEEECSCCCC
T ss_pred EEECCCCCCCccCEEEEcCCCCC
Confidence 99999999999998877665443
No 439
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.30 E-value=3.3e-11 Score=74.80 Aligned_cols=73 Identities=15% Similarity=0.217 Sum_probs=56.1
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.|.+ .+.|++++.. +... ....|.|.++..+|+|.|+|.+.|..|.... ..
T Consensus 13 ~~v~~G~~~~l~C~~~g~p~p-~i~W~~~~~~--~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s-~~ 80 (91)
T 3bfo_A 13 QKLMPGSTLVLQCVAVGSPIP-HYQWFKNELP--LTHE--------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDS-KK 80 (91)
T ss_dssp EEECTTSCEEEECEEECSSCC-EEEEEETTEE--CTTC--------CSSEEEESSCCGGGCEEEEEEEECSSCEEEC-CC
T ss_pred cEecCCCcEEEEEEeccCCCC-EEEEEcCCee--CCcC--------CCCeEEECCCCHHhCEEEEEEEEcCCCCEEe-ee
Confidence 557899999999999999888 8999998642 2111 1237999999999999999999999886542 23
Q ss_pred EEEEe
Q psy11549 149 YQVVL 153 (261)
Q Consensus 149 ~~v~~ 153 (261)
+.+.+
T Consensus 81 ~~l~V 85 (91)
T 3bfo_A 81 VEIII 85 (91)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 440
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=2.3e-11 Score=78.48 Aligned_cols=91 Identities=22% Similarity=0.207 Sum_probs=70.9
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecC-CCCCCCeE-EEEEEEeCCccceeEEE---ecCCCCcEEEcCCCCCCccEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPG-YDGGLPQT-FTLELYSASDLNLLVNL---TNLDTPAFTLEDLGLDGTVLMRVV 229 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~-~~~~~p~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~~~Y~~~ 229 (261)
.+|.+|....+.....+.+.|.|.++ .+++.++. |.++++..+.. .|.. .......++|.+ |.+++.|.|+
T Consensus 9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~--~w~~~~~~~~~~~~~~v~~--L~p~t~Y~fr 84 (112)
T 1bpv_A 9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNG--RWLKANFSNILENEFTVSG--LTEDAAYEFR 84 (112)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSC--CCEECCCSCCCSSEEEECS--CCSSCCEEEE
T ss_pred CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCC--ceEEeecccCccCEEEECC--CCCCCEEEEE
Confidence 46777777777778899999999954 56777754 99998876544 3321 223457899999 9999999999
Q ss_pred EEEEcCCCc-CCceeeeeeee
Q psy11549 230 ISGVNAKGR-SLPVIWDDFSM 249 (261)
Q Consensus 230 ~~a~N~~G~-~~~s~~~~~~~ 249 (261)
|.|.|..|. |.+|..+....
T Consensus 85 V~A~N~~G~~s~~S~~~~~~t 105 (112)
T 1bpv_A 85 VIAKNAAGAISPPSEPSDAIT 105 (112)
T ss_dssp EEEECTTSCEEEEEEEEEEEC
T ss_pred EEEEECCCCCCCCCCCCCCEE
Confidence 999999997 99998876554
No 441
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.30 E-value=9.8e-12 Score=92.69 Aligned_cols=164 Identities=12% Similarity=0.109 Sum_probs=81.0
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccc----------------cCCceEEeC----CceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLD----------------VGSERFSSG----SRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~----------------~~~~~~~~~----~~~~~l~i~~~~~~ 127 (261)
+.+..|++++|.|.+.+.+. ...+.|++...+.... ....++... .....|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (257)
T 3bn9_D 10 GLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE 89 (257)
T ss_dssp EEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred EEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 45789999999999987652 2379999864321110 011233322 34568999999999
Q ss_pred cCeEEEEEEEcCCc----------e---EEeeEEEEEEeCCCCCCCCcce----EEeecCCeEEEEeecCCCCCCCeE-E
Q psy11549 128 DYGTLSCAAQNAIG----------T---QVTPCLYQVVLAGKPQPPQNCS----VRNETTSSVHISCTPGYDGGLPQT-F 189 (261)
Q Consensus 128 d~g~y~C~~~~~~~----------~---~~~~~~~~v~~~~~p~~p~~~~----v~~~~~~~~~l~c~~~~~~~~p~~-~ 189 (261)
|+|.|.|.+.+..+ . ......+.|.. .++.+|.... .....|..++|.|.+ .+..|.. .
T Consensus 90 DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~-~~~~~P~v~~~~p~~~~~~g~~v~L~C~~--~g~~P~pi~ 166 (257)
T 3bn9_D 90 DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLV--KDYFPEPVT 166 (257)
T ss_dssp GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECS-SCCBCCEECCCCC-----------CCCEE--EEEBSSCCE
T ss_pred hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecC-CCCcCCcEEEecCcccccCCCcEEEEEEE--eeEECCCcE
Confidence 99999999998754 1 11222333332 1222232110 012358889999997 3433433 3
Q ss_pred EEEEEeCCccc-eeE-EEecCCC-----CcEEEcCCCCCCccEEEEEEEEEcCCCc
Q psy11549 190 TLELYSASDLN-LLV-NLTNLDT-----PAFTLEDLGLDGTVLMRVVISGVNAKGR 238 (261)
Q Consensus 190 ~~~~~~~~~~~-~~~-~~~~~~~-----~~~~i~~~~l~~~~~Y~~~~~a~N~~G~ 238 (261)
+.|++...... ... ....... ..+.|..+...+ |.| +|.|.|..+.
T Consensus 167 v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~Y--tC~v~n~~~~ 219 (257)
T 3bn9_D 167 VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSN 219 (257)
T ss_dssp EEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CE--EEEEEEGGGT
T ss_pred EEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeE--EEEEEecCCC
Confidence 33433332211 011 1111111 234555544446 889 9999996643
No 442
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=2.8e-11 Score=77.85 Aligned_cols=96 Identities=9% Similarity=-0.007 Sum_probs=74.5
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeCC-ccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSAS-DLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
..|.+|.++.+.......+.|.|.++...+.+ ..|.+.|+..+ .....+.........++|.+ |.++..|.|+|.|
T Consensus 6 ~~P~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A 83 (109)
T 2e7h_A 6 SGPPAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKTSENRAELRG--LKRGASYLVQVRA 83 (109)
T ss_dssp CSSCCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEESSSEEEEES--CCTTSCEEEEEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEccCCCEEEECC--CCCCCeEEEEEEE
Confidence 56778889999888999999999986544444 45999888765 22222222233457999999 9999999999999
Q ss_pred EcCCCcCCceeeeeeeeccc
Q psy11549 233 VNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~~~~ 252 (261)
.|..|.+.+|..+.+++...
T Consensus 84 ~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 84 RSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp ECSSCBCCCCSCEECCCCCC
T ss_pred EeCCccCCCCCCEEEEcCCC
Confidence 99999999999988876653
No 443
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=6.8e-11 Score=77.32 Aligned_cols=96 Identities=15% Similarity=0.085 Sum_probs=76.7
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVIS 231 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~ 231 (261)
..+|.+|.++.+.......+.|.|.++.+.+.++. |.+.|+......... .........+.|.+ |.++..|.|+|.
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~ 92 (119)
T 2ed7_A 15 SVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTTQPGSLQLTVGN--LKPEAMYTFRVV 92 (119)
T ss_dssp SSSCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEECCCTTCCEEEECS--CCSSSEEEECCE
T ss_pred CCCCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeEeecCCceEEEeCC--CCCCCEEEEEEE
Confidence 46788999999988889999999998766555654 999888765543222 22234568899999 999999999999
Q ss_pred EEcCCCcCCceeeeeeeecc
Q psy11549 232 GVNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 232 a~N~~G~~~~s~~~~~~~~~ 251 (261)
|.|..|.+.+|..+.+.+..
T Consensus 93 A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ed7_A 93 AYNEWGPGESSQPIKVATQP 112 (119)
T ss_dssp EEESSCBCSCCCCEEEECCC
T ss_pred EEcCCccCCCcCCEEEEeCC
Confidence 99999999999988887653
No 444
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.30 E-value=2.2e-11 Score=78.89 Aligned_cols=100 Identities=15% Similarity=0.203 Sum_probs=66.9
Q ss_pred eeeEEEEEEeec-eeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCC
Q psy11549 48 SNQLKLRVKYAP-ICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTE 126 (261)
Q Consensus 48 s~~~~l~V~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 126 (261)
+..+.|.|...| .+...... ..+.+|+++.|.|.+.+. | .+.|++++.... ......+...+....|.|.++..
T Consensus 8 ~~~~~l~V~~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~--p-~v~W~k~~~~l~-~~~~~~~~~~~~~~~L~I~~v~~ 82 (113)
T 2edh_A 8 RTSAMLTVRALPIKFTEGLRN-EEATEGATAVLRCELSKM--A-PVEWWKGHETLR-DGDRHSLRQDGARCELQIRGLVA 82 (113)
T ss_dssp CCCCCCCCCCSCCCEEECCCC-CEECTTSCEEEEEEESSC--C-CCEEEESSSBCC-CSSSEEEEEETTEEEEEECSCCS
T ss_pred cEEEEEEEEcCCCcccccCCc-eEEeCCCeEEEEEEECCC--C-cEEEEECCEECC-CCCcEEEEECCCEEEEEECCCCh
Confidence 445677787444 55544444 678899999999999764 4 699999874221 11222233344456899999999
Q ss_pred CcCeEEEEEEEcCCceEEeeEEEEEEeCCCCC
Q psy11549 127 LDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQ 158 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~ 158 (261)
+|+|.|+|.+ +.... ...+.|..+|.
T Consensus 83 ~D~G~Y~C~a----~~~~~--~~~l~V~~~p~ 108 (113)
T 2edh_A 83 EDAGEYLCMC----GKERT--SAMLTVRAMPS 108 (113)
T ss_dssp TTCEEEEEEE----TTEEE--EEEEEECCCCC
T ss_pred hhCEEEEEEe----CCCCE--EEEEEEeCCCC
Confidence 9999999999 33444 34455555554
No 445
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.30 E-value=3.9e-11 Score=75.90 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=59.7
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|.+.........+..|+.+.|.|.+. .|.+ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.|
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~-~v~W~k~g~~i~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 8 AAFAKILDPAYQVDKGGRVRFVVELA-DPKL-EVKWYKNGQEIR-PSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp CCEEECCCSCEEECTTEEEEEEEEES-CTTS-CEEEEESSCBCC-CBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CeEEecCCCccEEcCCCcEEEEEEec-CCCc-eEEEEECCEECC-CCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 34433333225678999999999998 5666 899999875321 122223334445567999999999999999999
Q ss_pred CCceEEeeEEEEEEeCCCC
Q psy11549 139 AIGTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 139 ~~~~~~~~~~~~v~~~~~p 157 (261)
+.... ...+.|..+|
T Consensus 83 --g~~~~--~~~l~V~~~P 97 (100)
T 2yuv_A 83 --GDEKC--STELFVRSGP 97 (100)
T ss_dssp --TTEEE--EEEEEECCSC
T ss_pred --CCceE--EEEEEEecCC
Confidence 33444 3445555554
No 446
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=79.06 Aligned_cols=83 Identities=14% Similarity=0.223 Sum_probs=60.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
+.+..|+++.|.|.+.+.+.+ +.|++++.... ......+...+....|.|.++..+|+|.|+|.+.|..+ .
T Consensus 20 ~~v~~G~~v~l~C~~~~~p~~--v~W~k~g~~~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~------~ 90 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSRVDFP--ATWYKDGQKVE-ESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA------F 90 (104)
T ss_dssp EEEESSSCEECCEECSSTTCC--CEEEETTEECC-CBTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC------C
T ss_pred EEEeCCCcEEEEEEecCCCCc--cEEeeCCEECC-CCCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE------E
Confidence 567899999999999988876 89999874221 12222333345556899999999999999999998633 3
Q ss_pred EEEEeCCCCCCC
Q psy11549 149 YQVVLAGKPQPP 160 (261)
Q Consensus 149 ~~v~~~~~p~~p 160 (261)
+.+.|..+|.+|
T Consensus 91 ~~l~V~~~P~pp 102 (104)
T 2e6p_A 91 FGVTVQDPSGPS 102 (104)
T ss_dssp EEEEEECCCCSS
T ss_pred EEEEEcCCCCCc
Confidence 344555666655
No 447
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.29 E-value=2.1e-11 Score=95.03 Aligned_cols=123 Identities=18% Similarity=0.225 Sum_probs=78.0
Q ss_pred EECCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCC-cEEEEEEEeeCCCC--ceeE
Q psy11549 17 LSNQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSE-SVDIHCAVEADPPA--RSFK 93 (261)
Q Consensus 17 ~~~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~~~~~~--~~~~ 93 (261)
..+.+|+|.+++.+|.|.|+|.+.+..+.. ...+.|.|..+|.+.........+..|+ .++|.|.+.+..++ ..+.
T Consensus 251 ~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~-~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~Vt 329 (401)
T 3f8u_B 251 TGNGTFWLPRVQPFQEGTYLATIHLPYLQG-QVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVE 329 (401)
T ss_dssp EEEEEEEETTCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEE
T ss_pred CCcEEEEECcCCHhhCceEEEEEEecccce-eEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCCCCcEEE
Confidence 356799999999999999999998876654 5567888888877653322111134676 79999999987554 5899
Q ss_pred EE-EcC-CccccccCC-----ceEEeCCc----eeEEEEecCCC-CcCeEEEEEEEcCC
Q psy11549 94 WK-FNN-SGETLDVGS-----ERFSSGSR----GSMLRYTPVTE-LDYGTLSCAAQNAI 140 (261)
Q Consensus 94 W~-~~~-~~~~~~~~~-----~~~~~~~~----~~~l~i~~~~~-~d~g~y~C~~~~~~ 140 (261)
|. +++ .+....... ......+. .+.|.+..... ++.+.|+|.+.+..
T Consensus 330 W~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 330 WELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred EEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 95 765 222221111 01111111 22344444332 24459999999875
No 448
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=5.5e-11 Score=75.06 Aligned_cols=83 Identities=16% Similarity=0.280 Sum_probs=62.9
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
+.+..|+.+.|.|.+.+.| | .+.|++++.. +.. ..++.... ..|.|.++..+|+|.|+|.|.|..|.... .
T Consensus 13 ~~v~~G~~v~L~C~~~g~p-p-~i~W~k~g~~--~~~-~~~~~~~~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~--~ 83 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRDDV-Q-SINWLRDGVQ--LAE-SNRTRITG--EEVEVQDSVPADSGLYACVTSSPSGSDTT--Y 83 (99)
T ss_dssp CCBCTTSCEEEECCCCSSC-C-EEEEEESSSB--CCC-CSSEEECS--SEEEETTCCTTTCEEEEEEEEETTEEEEE--E
T ss_pred eEEeCCCcEEEEEEecCCC-C-eEEEEECCEE--CCC-CCcEEEEC--CEEEEccCCHHHCEEEEEEEEeCCceEEE--E
Confidence 5677999999999999875 5 8999998743 222 22333332 37999999999999999999999887655 6
Q ss_pred EEEEeCCCCCCC
Q psy11549 149 YQVVLAGKPQPP 160 (261)
Q Consensus 149 ~~v~~~~~p~~p 160 (261)
+.+.|...|..+
T Consensus 84 ~~l~V~~~~~s~ 95 (99)
T 2cr3_A 84 FSVNVSDALPSG 95 (99)
T ss_dssp EEECBCSCCSCC
T ss_pred EEEEEecCCCCc
Confidence 667776666544
No 449
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.29 E-value=2.4e-11 Score=79.82 Aligned_cols=103 Identities=14% Similarity=0.216 Sum_probs=78.0
Q ss_pred EEEEeCCCCCCCCcc--eEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCcc
Q psy11549 149 YQVVLAGKPQPPQNC--SVRNETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTV 224 (261)
Q Consensus 149 ~~v~~~~~p~~p~~~--~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~ 224 (261)
..+.+..+|.+|.++ .+.......+.|.|.++.+++.++. |.++++......... .........++|.+ |.+++
T Consensus 10 ~~l~v~~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~--L~p~t 87 (121)
T 1wf5_A 10 AHLRVRQLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKG--LVPAR 87 (121)
T ss_dssp CCSSCCCCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEES--CCTTC
T ss_pred EEEEEeeCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCCCceEeEcccCCCccEEEECC--cCCCC
Confidence 345566889999998 7777778999999998777777766 999988765221111 12234567899999 99999
Q ss_pred EEEEEEEEEcCCCcCCceeeee-eeecccc
Q psy11549 225 LMRVVISGVNAKGRSLPVIWDD-FSMSGAH 253 (261)
Q Consensus 225 ~Y~~~~~a~N~~G~~~~s~~~~-~~~~~~~ 253 (261)
.|.|+|.|.|..|.+.+|.... +.++...
T Consensus 88 ~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~ 117 (121)
T 1wf5_A 88 SYQFRLCAVNDVGKGQFSKDTERVSLPESG 117 (121)
T ss_dssp EEEEEEEEEESSCEEEECCCCSCEECCCCS
T ss_pred EEEEEEEEEcCCccCCCcCCcceeEcCCCC
Confidence 9999999999999999998863 5555433
No 450
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.28 E-value=1.1e-09 Score=80.44 Aligned_cols=136 Identities=12% Similarity=0.052 Sum_probs=98.3
Q ss_pred eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE-eCCCCCCCCcceEEeecCCeEEEEeecCCCCCCC-eEEEEEE
Q psy11549 116 GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV-LAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLP-QTFTLEL 193 (261)
Q Consensus 116 ~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~-~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~ 193 (261)
...+.+.++.....+.|+..|.|..|....+..+.+. ....|.+|.++.+.......+.|.|.++...+.+ ..|.+.|
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~ 136 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCY 136 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEE
Confidence 3468899999999999999999987765443233332 3356778888888888899999999976544444 4599988
Q ss_pred EeCCcccee---E---EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCcee-eeeeeecccc
Q psy11549 194 YSASDLNLL---V---NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVI-WDDFSMSGAH 253 (261)
Q Consensus 194 ~~~~~~~~~---~---~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~-~~~~~~~~~~ 253 (261)
+........ + .........++|.+ |.+++.|.|+|.|.|..|.+.+|. .+.+++....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 137 GLVNDDNRPIGPMKKVLVDNPKNRMLLIEN--LRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp EEBCTTSCBSSCCEECCCSCTTCCEEEEEC--CCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred EECCCCCCccCcceEEEecCCcceEEEeCC--CCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 864433211 1 12223446899999 999999999999999999999987 4666554433
No 451
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.28 E-value=1.2e-11 Score=90.04 Aligned_cols=162 Identities=12% Similarity=0.041 Sum_probs=88.3
Q ss_pred eeCCCcEEEEEEEeeCC---CCceeEEEEcCCccccccCCceE--EeCC----ceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 71 ASRSESVDIHCAVEADP---PARSFKWKFNNSGETLDVGSERF--SSGS----RGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~~---~~~~~~W~~~~~~~~~~~~~~~~--~~~~----~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+..|+.++|.|.+.+.+ +...+.|++++.. +....... .... ..+.|.|.++..+|.|.|+|.+.+..+
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~--~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~ 100 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVE--VHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDL 100 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEE--ECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTC
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCcc--ccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcC
Confidence 56899999999999874 3348999998732 11110000 0011 134699999999999999999999765
Q ss_pred eEEeeEEEEEEeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE--EEecCCCCcE
Q psy11549 142 TQVTPCLYQVVLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV--NLTNLDTPAF 213 (261)
Q Consensus 142 ~~~~~~~~~v~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~~ 213 (261)
.......+.. +.....+|. +.+.. ..|..++|.|.+ .+..|.. .+.|+++........ ......+..+
T Consensus 101 ~~~~~~~v~~-~~~~~~~P~-v~~~~~~~~~~~g~~~~L~C~~--~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~ 176 (218)
T 2rgs_A 101 PSPIERTISK-IKGLVRAPQ-VYILPPPAEQLSRKDVSLTCLV--VGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSY 176 (218)
T ss_dssp SSCEEEEECC-CCCCCBCCE-EEEECCCGGGTTSSEEEEEEEE--EEEBSSCCEEEEEETTEEECCEEECCCEECTTSCE
T ss_pred CCcceEEEee-cCCCCCCCE-EEEECCChHHhcCCceEEEEEE--EeeeCCCcEEEEEECCEeccCceecccEECCCCCE
Confidence 4311112211 111122232 12211 237899999997 4434532 334444433221111 1111222333
Q ss_pred EEc------CCCCCCccEEEEEEEEEcCCCcCC
Q psy11549 214 TLE------DLGLDGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 214 ~i~------~~~l~~~~~Y~~~~~a~N~~G~~~ 240 (261)
.+. .....++|.| +|.|.|......
T Consensus 177 ~~~s~l~v~~~~~~d~g~Y--tC~a~n~~l~~~ 207 (218)
T 2rgs_A 177 FIYSKLNMKTSKWEKTDSF--SCNVRHEGLKNY 207 (218)
T ss_dssp EEEEEEEEEHHHHHHCSCE--EEEEECTTSGGG
T ss_pred EEEEEEEECHHHcCCCCeE--EEEEEcCCCCCc
Confidence 332 2111247899 999999886543
No 452
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=4.8e-11 Score=76.79 Aligned_cols=96 Identities=13% Similarity=0.147 Sum_probs=71.8
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCC-C-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGL-P-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~-p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
.+|.+|....+.......+.|.|.++.+.+. + ..|.++++..................++|.+ |.+++.|.|+|.|
T Consensus 6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~--L~p~t~Y~frV~A 83 (109)
T 1x5x_A 6 SGPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDGEDLAYTVKN--LRRSTKYKFKVIA 83 (109)
T ss_dssp CCCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEESCSEEEEES--CCSSCEEEEEEEE
T ss_pred CCCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEeCCccEEEECC--CCCCCEEEEEEEE
Confidence 4566777777777889999999997655443 5 5599998776543111122233468899999 9999999999999
Q ss_pred EcCCCcCCceeeeeeeeccc
Q psy11549 233 VNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~~~~ 252 (261)
.|..|.+.+|..+.+.+...
T Consensus 84 ~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 84 YNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp ECSSCEEEECCCEEEECCCC
T ss_pred EeCCCCcCCccCEEeEeCCC
Confidence 99999999998887766543
No 453
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=1e-10 Score=75.37 Aligned_cols=95 Identities=21% Similarity=0.260 Sum_probs=73.1
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCC-CCCCCeE-EEEEEEeCCccceeEEE---ecCCCCcEEEcCCCCCCccEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGY-DGGLPQT-FTLELYSASDLNLLVNL---TNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~-~~~~p~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
..+|.+|.++.+.......+.|.|.++. +++.++. |.++++..... .|.. .......++|.+ |.++..|.|
T Consensus 5 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~--~w~~~~~~~~~~~~~~v~~--L~p~t~Y~f 80 (110)
T 2yuw_A 5 SSGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTE--DWIVANKDLIDKTKFTITG--LPTDAKIFV 80 (110)
T ss_dssp CCCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCS--SEEECCSSCCCSSEEEECS--CCTTCEEEE
T ss_pred CCCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCc--cceEeccccCccCEEEECC--CCCCCEEEE
Confidence 3678889888888888999999999764 4556654 99998876554 3322 123567899999 999999999
Q ss_pred EEEEEcCCCcCCceeeee-eeeccc
Q psy11549 229 VISGVNAKGRSLPVIWDD-FSMSGA 252 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~-~~~~~~ 252 (261)
+|.|.|..|.+.+|.... ++.+..
T Consensus 81 rV~A~n~~G~s~~S~~~~~v~~~~~ 105 (110)
T 2yuw_A 81 RVKAVNAAGASEPKYYSQPILVKES 105 (110)
T ss_dssp EEEEEETTEECCCEECSSCEECCCC
T ss_pred EEEEEcCCcCCCCcCCCCCEEecCC
Confidence 999999999999998764 444433
No 454
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=2.6e-11 Score=79.94 Aligned_cols=97 Identities=22% Similarity=0.260 Sum_probs=74.0
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeE-EEEEEEeCC-ccceeE-EE--e--cCCCCcEEEcCCCCCCccEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQT-FTLELYSAS-DLNLLV-NL--T--NLDTPAFTLEDLGLDGTVLM 226 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~-~~~~~~-~~--~--~~~~~~~~i~~~~l~~~~~Y 226 (261)
..+|.+|.++.+.......+.|.|.++.+++.++. |.++|+... .....| .. . ......++|.+ |.+++.|
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~--L~p~t~Y 92 (124)
T 1wis_A 15 PELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPD--LNPFTCY 92 (124)
T ss_dssp CCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECS--CCTTSEE
T ss_pred CCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCC--CCCCCEE
Confidence 46788999998888889999999998888777754 999888731 111123 11 1 24568899999 9999999
Q ss_pred EEEEEEEcCCCcCCceeeee-eeeccc
Q psy11549 227 RVVISGVNAKGRSLPVIWDD-FSMSGA 252 (261)
Q Consensus 227 ~~~~~a~N~~G~~~~s~~~~-~~~~~~ 252 (261)
.|+|.|.|..|.+.+|.... +++...
T Consensus 93 ~frV~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 93 SFRMRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp CCCCEEECSSCBCCCCCCCCCEECCCS
T ss_pred EEEEEEEECCccCCCcCCccceEcCCC
Confidence 99999999999999998653 544433
No 455
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=2.3e-11 Score=77.84 Aligned_cols=77 Identities=17% Similarity=0.088 Sum_probs=56.1
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEc
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQN 138 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~ 138 (261)
|.+...... +.+..|+.+.|.|.+.+.+.+ +.|++++.... ......+...+....|.|.++..+|+|.|+|.+.|
T Consensus 9 p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~--v~W~k~g~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 9 LEVLQDIAD-LTVKAAEQAVFKCEVSDEKVT--GKWYKNGVEVR-PSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCEEECCCC-EEEESSCCEECCCEESCSSCE--EEEEESSCBCC-CCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CEEecCCCC-eEEeCCCeEEEEEEEcCCCcc--eEEEcCCEECc-CCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 333333333 678899999999999987654 99999875322 12223334445556899999999999999999999
Q ss_pred C
Q psy11549 139 A 139 (261)
Q Consensus 139 ~ 139 (261)
.
T Consensus 85 ~ 85 (106)
T 2dlt_A 85 Y 85 (106)
T ss_dssp S
T ss_pred C
Confidence 7
No 456
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.27 E-value=5.2e-11 Score=76.98 Aligned_cols=99 Identities=11% Similarity=0.034 Sum_probs=76.1
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCC-CCe----EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGG-LPQ----TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVV 229 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~-~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~ 229 (261)
.+|.+|.++++.......+.|+|.++...+ ... .|.+.|+........+.........++|.+ |++++.|+|+
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~g--L~P~T~Y~f~ 84 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTG--LKPNTLYEFS 84 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEES--CCTTCEECCE
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCC--CCCCcEEEEE
Confidence 577899999998889999999999754322 223 699988763222222233334567899999 9999999999
Q ss_pred EEEEcCCCcCCceeeeeeeeccc-ccC
Q psy11549 230 ISGVNAKGRSLPVIWDDFSMSGA-HYA 255 (261)
Q Consensus 230 ~~a~N~~G~~~~s~~~~~~~~~~-~~~ 255 (261)
|.|.|..|.|.+|..+.+++... .+.
T Consensus 85 V~A~~~~G~g~~S~~v~~~T~~~~~Ps 111 (113)
T 1x5j_A 85 VMVTKGRRSSTWSMTAHGTTFELSGPS 111 (113)
T ss_dssp EEEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred EEEecCCccCCCcccEEeeccCCCCCC
Confidence 99999999999999999888766 554
No 457
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.7e-11 Score=80.39 Aligned_cols=98 Identities=16% Similarity=0.194 Sum_probs=75.4
Q ss_pred EEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCC-CCCCeE-EEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccE
Q psy11549 148 LYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYD-GGLPQT-FTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVL 225 (261)
Q Consensus 148 ~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~-~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 225 (261)
.+.+.+..+|.+|.++.+.......+.|.|.++.. ++.++. |.++++..................++|.+ |.++..
T Consensus 9 ~~~v~~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~--L~p~t~ 86 (120)
T 2yux_A 9 SIDIQIIDRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITE--LVIGNE 86 (120)
T ss_dssp CCCCCCCCCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECC--CCSSEE
T ss_pred EEEEEeecCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeeecCCcCEEEECC--CCCCCE
Confidence 44566678999999998888889999999998654 446654 99988876544211111234567899999 999999
Q ss_pred EEEEEEEEcCCCcCCceeeeee
Q psy11549 226 MRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 226 Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
|.|+|.|.|..|.+++|.....
T Consensus 87 Y~frV~A~n~~G~s~~S~~s~~ 108 (120)
T 2yux_A 87 YYFRVFSENMCGLSEDATMTKE 108 (120)
T ss_dssp EEEEECCCSSSCSCSSCEECSS
T ss_pred EEEEEEEeeCCcCCCCccCcCC
Confidence 9999999999999999986543
No 458
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.27 E-value=3e-09 Score=76.94 Aligned_cols=134 Identities=7% Similarity=-0.005 Sum_probs=97.3
Q ss_pred eeEEEEecCCCCcCeEEEEEEEcCCceEEeeE---EEEEEe---CCCCCCCCcceEEeecCCeEEEEeecCC-CCCCC-e
Q psy11549 116 GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPC---LYQVVL---AGKPQPPQNCSVRNETTSSVHISCTPGY-DGGLP-Q 187 (261)
Q Consensus 116 ~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~---~~~v~~---~~~p~~p~~~~v~~~~~~~~~l~c~~~~-~~~~p-~ 187 (261)
...+.+.++.....+.|++.|.|..|....+. .+.+.. ..+|.+|.++.+.......+.|.|.++. ..+.+ .
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~ 148 (214)
T 2ibg_A 69 SFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLIT 148 (214)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCC
T ss_pred ceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCccCCCCcc
Confidence 44678999999999999999998877543321 122221 1244567777777777889999999854 23344 4
Q ss_pred EEEEEEEeCCc-cceeE-EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeecc
Q psy11549 188 TFTLELYSASD-LNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 188 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~ 251 (261)
.|.+.|+..+. ..... .........++|.+ |.+++.|.|+|.|.|..|.|.+|..+.+++..
T Consensus 149 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 149 GYYAYYRPSSSAGEYFKATIEGAHARSFKIAP--LETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEETTCCSCCEEEEEECTTCCEEEECS--CCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred eEEEEEEECCCCcceEEeeccCCcceEEEeCC--CCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 59999887665 22122 33333457899999 99999999999999999999999999887764
No 459
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.26 E-value=2.2e-09 Score=81.45 Aligned_cols=219 Identities=8% Similarity=0.025 Sum_probs=126.5
Q ss_pred EccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeece-eecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCcc
Q psy11549 24 LQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPI-CKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWKFNNSGE 101 (261)
Q Consensus 24 i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~-~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~ 101 (261)
+..+...-.-.+++.|.|..|..... .+.+..... ...+............+.|.+.....+. .-.+.|...+...
T Consensus 65 ~~~l~p~t~Y~~~V~A~n~~G~s~~s--~~~~~~~~~~~~~p~~~~~~~~~~~si~l~W~~p~~~i~~Y~v~~~~~~~~~ 142 (290)
T 3l5i_A 65 LTVNLTNDRYLATLTVRNLVGKSDAA--VLTIPACDFQATHPVMDLKAFPKDNMLWVEWTTPRESVKKYILEWCVLSDKA 142 (290)
T ss_dssp EEEEECSSCEEEEEEEEESSCBCCCE--EEEECCTTCCCCCCCEEEEEEEETTEEEEEEECCSSCCCEEEEEEEEECSSS
T ss_pred EEEEcCCceEEEEEEEEcCCCCCCCc--eEEeecccccCCCccceeEEEeCCCeEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 33444444445566778887765222 333322100 1111111111222457777776543321 1145665443211
Q ss_pred ccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEE-EeCCCCCCCCcceEEeecCCeEEEEeecC
Q psy11549 102 TLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQV-VLAGKPQPPQNCSVRNETTSSVHISCTPG 180 (261)
Q Consensus 102 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v-~~~~~p~~p~~~~v~~~~~~~~~l~c~~~ 180 (261)
.. ..............+.+.++.....+.|...|.|..|..... .+.+ .....|..|..+.+.......+.|+|.++
T Consensus 143 ~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~-~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~W~~~ 220 (290)
T 3l5i_A 143 PC-ITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYLKQAPPSKGPTVRTKKVGKNEAVLEWDQL 220 (290)
T ss_dssp CC-CCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCCE-EEEEESSCCCCSSCCCEEEEEECSSCEEEEECCC
T ss_pred CC-CcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCcccccE-EEEeEccccCCCCCCeeeEeeccCCEEEEEEcCC
Confidence 10 001111223334467778999988999999999987755432 2222 23344554446677777899999999942
Q ss_pred --CCCCCC-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 181 --YDGGLP-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 181 --~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
...+.+ ..|.+.|+....... ..........++|.+ |.++..|.|+|.|.|..| +..|..+.++++
T Consensus 221 ~~~~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~~--L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~ 289 (290)
T 3l5i_A 221 PVDVQNGFIRNYTIFYRTIIGNET-AVNVDSSHTEYTLSS--LTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP 289 (290)
T ss_dssp CHHHHSSCCCEEEEEEEETTSCCE-EEEEETTCSEEEECS--CCTTCEEEEEEEEEETTE-EEECCCEEEECC
T ss_pred ChhccCCEEEEEEEEEEeCCCCeE-EEEeCCCceEEEeCC--CCCCCEEEEEEEEEeCCC-CCCCCceEeecC
Confidence 222334 459999887654432 223345568999999 999999999999999999 777777777654
No 460
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.26 E-value=5.7e-11 Score=77.47 Aligned_cols=100 Identities=25% Similarity=0.360 Sum_probs=76.6
Q ss_pred EeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccceeE--EEecCCCCcEEEcCCCCCCccEEEE
Q psy11549 152 VLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLNLLV--NLTNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 152 ~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
.+..+|.+|.++.+.......+.|.|.++.+++.++ .|.+.|+..... ..| .........++|.+ |.+++.|.|
T Consensus 11 ~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~--L~p~t~Y~f 87 (117)
T 1uem_A 11 DLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVS-NSWQTVANHVKTTLYTVRG--LRPNTIYLF 87 (117)
T ss_dssp CSCCSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTE-EEEEEEEEEECSSEEEECS--CCTTCEEEE
T ss_pred CCCCCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCC-CceeEcccccCcCEEEECC--CCCCCEEEE
Confidence 345788899999988888999999999866666664 499988876422 133 11233568899999 999999999
Q ss_pred EEEEEcCCCcCCceeeee-eeeccccc
Q psy11549 229 VISGVNAKGRSLPVIWDD-FSMSGAHY 254 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~-~~~~~~~~ 254 (261)
+|.|.|..|.+.+|.... +++..+.+
T Consensus 88 rV~A~n~~G~s~~S~~~~~v~t~~~~P 114 (117)
T 1uem_A 88 MVRAINPQGLSDPSPMSDPVRTQDSGP 114 (117)
T ss_dssp EEEEEETTEEEEECCCCCCEECCCSSC
T ss_pred EEEEECCCccCCCcCCCccEEccCCCC
Confidence 999999999998888876 66554443
No 461
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.26 E-value=2.1e-11 Score=96.16 Aligned_cols=120 Identities=13% Similarity=0.121 Sum_probs=75.8
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcc-eeeeEEE--EEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEE
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEA-TSNQLKL--RVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWK 95 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~-~s~~~~l--~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~ 95 (261)
.+|.|..++.+|+|.|+|.+.+..+.. ....+.+ .+..+|.+...... .....|+.++|.|.+.+..+ ..++.|+
T Consensus 233 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~-~~~~~g~~~~L~C~~~g~~P~~i~v~W~ 311 (376)
T 2aty_A 233 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPP-KEQMAKDKVSLTCMITDFFPEDITVEWQ 311 (376)
T ss_pred EEEEechHhccCCCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCC-HHHhcCCceEEEEEEEEeECCCcEEEEE
Confidence 379999999999999999998886643 1222222 34456655433322 22335889999999998644 4589999
Q ss_pred EcCCccccccCCceEE-eCCc----eeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 96 FNNSGETLDVGSERFS-SGSR----GSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 96 ~~~~~~~~~~~~~~~~-~~~~----~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
+++.... ........ ..+. .+.|.|.....+|.|.|+|.|.+..-
T Consensus 312 k~g~~~~-~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 312 WNGQPAE-NYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred ECCEECC-CeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 9874321 10111111 1111 23466666666678999999998643
No 462
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.26 E-value=4.6e-11 Score=88.18 Aligned_cols=172 Identities=14% Similarity=0.147 Sum_probs=93.0
Q ss_pred EEeeCCCcEEEEEEEeeCCC---CceeEEEEcCCccccc----c-----------------CCceEEe----CCceeEEE
Q psy11549 69 VGASRSESVDIHCAVEADPP---ARSFKWKFNNSGETLD----V-----------------GSERFSS----GSRGSMLR 120 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~---~~~~~W~~~~~~~~~~----~-----------------~~~~~~~----~~~~~~l~ 120 (261)
+.+.+|++++|.|.+.+.+. ...+.|++...+.... . ...++.. ......|.
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 89 (239)
T 3tv3_H 10 TLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLK 89 (239)
T ss_dssp SEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEE
T ss_pred EEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEE
Confidence 45779999999999987542 3379999853221110 0 0123322 23455799
Q ss_pred EecCCCCcCeEEEEEEEcCCc-----------eEEeeEEEEEEeC-CCCCCCCcceE----EeecCCeEEEEeecCCCCC
Q psy11549 121 YTPVTELDYGTLSCAAQNAIG-----------TQVTPCLYQVVLA-GKPQPPQNCSV----RNETTSSVHISCTPGYDGG 184 (261)
Q Consensus 121 i~~~~~~d~g~y~C~~~~~~~-----------~~~~~~~~~v~~~-~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~ 184 (261)
|.++..+|+|.|.|.+.+..+ .........+.+. .++.+|..... ....+..+.|.|.+ .+.
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~--~~~ 167 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV--KDY 167 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEE--EEE
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEE--eeE
Confidence 999999999999999986421 1111111223332 23333322111 11348999999997 343
Q ss_pred CCeEE-EEEEEeCCccceeE--EEecCCC-----CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeee
Q psy11549 185 LPQTF-TLELYSASDLNLLV--NLTNLDT-----PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWD 245 (261)
Q Consensus 185 ~p~~~-~~~~~~~~~~~~~~--~~~~~~~-----~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~ 245 (261)
.|... ..|++......... ....... ..++|......+ +.| +|.+.|..+.......+
T Consensus 168 ~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y--tC~v~h~~~~~~~~~~l 233 (239)
T 3tv3_H 168 FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSNTKVDKRV 233 (239)
T ss_dssp BSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCC--EEEEEEGGGTEEEEEEC
T ss_pred eCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEE--EEEEEECCCCceEEEEe
Confidence 45332 33433332111111 1111111 245666655566 889 99999988765444433
No 463
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.26 E-value=7.5e-11 Score=76.05 Aligned_cols=90 Identities=17% Similarity=0.298 Sum_probs=60.1
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCccccccCC----ceEEeC-----CceeEEEEecCCC
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETLDVGS----ERFSSG-----SRGSMLRYTPVTE 126 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~~~~~----~~~~~~-----~~~~~l~i~~~~~ 126 (261)
.+|.+...+.. ..+..|++++|.|.+.+.+. +..+.|++++.. +.... .++... .....|.|.++..
T Consensus 9 ~~P~i~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 9 PXPQITVQPET-QSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEA--LQDAEMENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp CSCEEEECCCC-EEECTTCCEEEEEEEEESCCCCCEEEEEETTEE--CTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCeEEeCCCC-cEEECCCCEEEEEEEecCCCCCEEEEEccCCcc--cccccccceeeeeccCCCccccceEEEEecccc
Confidence 34555544443 57889999999999997643 338999998742 21111 011111 0135899999999
Q ss_pred CcCeEEEEEEEcCCceE-EeeEEE
Q psy11549 127 LDYGTLSCAAQNAIGTQ-VTPCLY 149 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~-~~~~~~ 149 (261)
+|+|.|+|.|.|..|.. .....+
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~~~l 109 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVXAXL 109 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeEEEE
Confidence 99999999999998874 343333
No 464
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.26 E-value=1.8e-09 Score=77.98 Aligned_cols=135 Identities=10% Similarity=0.079 Sum_probs=97.6
Q ss_pred eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEE-eCCCCC-CCCcceEEee--cCCeEEEEeecCCCCCCC-eEEE
Q psy11549 116 GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVV-LAGKPQ-PPQNCSVRNE--TTSSVHISCTPGYDGGLP-QTFT 190 (261)
Q Consensus 116 ~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~-~~~~p~-~p~~~~v~~~--~~~~~~l~c~~~~~~~~p-~~~~ 190 (261)
...+.+.++.....+.|++.|.|..|....+..+.+. ....|. +|.++.+... ....+.|.|.++...+.+ ..|.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~ 142 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYI 142 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEE
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEE
Confidence 3478899999999999999999987765433233332 223444 8888887765 367999999976544444 5599
Q ss_pred EEEEeCCccce---eEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeeccc
Q psy11549 191 LELYSASDLNL---LVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 191 ~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~ 252 (261)
+.|+....... ...........++|.+ |.+++.|.|+|.|.|..|.|.+|..+.+.....
T Consensus 143 v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~ 205 (211)
T 3p4l_A 143 IYYSTDVNAEIHDWVIEPVVGNRLTHQIQE--LTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 205 (211)
T ss_dssp EEEESCTTSCGGGSEEEEEESSCSEEEECC--CCTTCEEEEEEEEEETTEECCCCCCEEEECC--
T ss_pred EEEEECCCCCCCceEEEEecCCeeEEEEcC--CCCCCEEEEEEEEEcCCccCCCCCCEEccCccc
Confidence 98886544321 1123344568899999 999999999999999999999999998876644
No 465
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.25 E-value=9.3e-11 Score=76.81 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=75.1
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCC-CCCCC-eEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGY-DGGLP-QTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~-~~~~p-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
..+|.+|.++.+.......+.|.|.++. +.+.+ ..|.+.|+......... .........++|.+ |.+++.|.|+|
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V 92 (120)
T 1x5f_A 15 GPLPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQN--LMPATVYIFRV 92 (120)
T ss_dssp CCCCCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECS--CCTTCEEEEEE
T ss_pred CCCCCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEEeccCCccEEEeCC--CCCCCEEEEEE
Confidence 4678889999888888889999999865 44444 55999988765442222 23334568999999 99999999999
Q ss_pred EEEcCCCcCCceeeeeeeecc
Q psy11549 231 SGVNAKGRSLPVIWDDFSMSG 251 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~~~~~~ 251 (261)
.|.|..|.+.+|..+.+++..
T Consensus 93 ~A~n~~G~g~~S~~~~~~T~~ 113 (120)
T 1x5f_A 93 MAQNKHGSGESSAPLRVETQP 113 (120)
T ss_dssp EEECSSCEEEECCCEEEECCC
T ss_pred EEECCCccCCCCCCEEEEeCC
Confidence 999999999999988887743
No 466
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=8.5e-11 Score=75.19 Aligned_cols=95 Identities=17% Similarity=0.125 Sum_probs=74.2
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
..|.+|.++.+.......+.|+|.++...+.+ ..|.+.|+...... +.........+.|.+ |.+++.|.|+|.|.
T Consensus 6 ~~P~~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~ 81 (106)
T 2ed8_A 6 SGPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGK--EQNIEVDGLSYKLEG--LKKFTEYSLRFLAY 81 (106)
T ss_dssp CCCCCCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCC--EEEEEECSSCEEEES--CCTTCEEEEEEEEE
T ss_pred CCCcCCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCc--eEEEeCCccEEEECC--CCCCCEEEEEEEEE
Confidence 56788999988888899999999986444334 55999988765542 211222358999999 99999999999999
Q ss_pred cCCCcCCceeeeeeeecccc
Q psy11549 234 NAKGRSLPVIWDDFSMSGAH 253 (261)
Q Consensus 234 N~~G~~~~s~~~~~~~~~~~ 253 (261)
|..|.+.+|..+.+++....
T Consensus 82 n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 82 NRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp CSSCEEEECCCEEEECCCCC
T ss_pred eCCccCCCcCCEEEEcCCCC
Confidence 99999999998888765443
No 467
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.25 E-value=1.5e-10 Score=84.82 Aligned_cols=171 Identities=11% Similarity=0.116 Sum_probs=94.7
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc-c---------------CCceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD-V---------------GSERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~-~---------------~~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.. ....+.|++...+.... + ...++.. ......|.|.++..+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (230)
T 3n9g_H 10 EVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSE 89 (230)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChh
Confidence 5678999999999997632 22379999743221110 0 0123322 224557999999999
Q ss_pred cCeEEEEEEEcCC-----c-e--EEeeEEEEEEeCCCCCCCCcceEE----eecCCeEEEEeecCCCCCCC--eEEEEEE
Q psy11549 128 DYGTLSCAAQNAI-----G-T--QVTPCLYQVVLAGKPQPPQNCSVR----NETTSSVHISCTPGYDGGLP--QTFTLEL 193 (261)
Q Consensus 128 d~g~y~C~~~~~~-----~-~--~~~~~~~~v~~~~~p~~p~~~~v~----~~~~~~~~l~c~~~~~~~~p--~~~~~~~ 193 (261)
|+|.|.|.+.+.. + . ......+.|.. .++.+|....+. ...|..++|.|.+ .+..| +.+.|
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~--~~~~P~~~~v~W-- 164 (230)
T 3n9g_H 90 DTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLV--KDYFPEPVTVSW-- 164 (230)
T ss_dssp GCEEEEEEEECCCSSSTTCCEEEECCCEEEEECS-SCCBCCEEEEECCCCCCCTTCEEEEEEEE--EEEBSSCCEEEE--
T ss_pred hCEEEEEEEccCCCCcccccccccCCCEEEEEEe-cCCCCCEEEecCCCccccCCCCEEEEEEE--EeEECCCEEEEE--
Confidence 9999999998753 1 1 11222333322 222233211111 1358999999997 33334 23333
Q ss_pred EeCCccceeE---EEecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 194 YSASDLNLLV---NLTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 194 ~~~~~~~~~~---~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
+........ ....... ..+.|......+ +.| +|.+.|..+.......+.+.
T Consensus 165 -~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y--tC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 165 -NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp -GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCC--EEEEEEGGGTEEEEEECCCC
T ss_pred -CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeE--EEEEEECCCCcceEEEccCC
Confidence 322111001 0011111 256777766667 899 99999988765544444443
No 468
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=1.8e-10 Score=75.21 Aligned_cols=98 Identities=15% Similarity=0.077 Sum_probs=74.0
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
...|.+|.++.+.......+.|.|.++...+.-..|.+.|+......... .........++|.+ |.++..|.|+|.|
T Consensus 15 ~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 15 AGVPDTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLNIPNPAQTSVVVED--LLPNHSYVFRVRA 92 (118)
T ss_dssp CSCCCCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEEESCTTCCEEEEES--CCTTCEEEEEEEE
T ss_pred CCCCCCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEEcCCCCcCEEEeCC--CCCCCEEEEEEEE
Confidence 35778888888888889999999998655542345999998765543222 33334568999999 9999999999999
Q ss_pred EcCCCcCCcee-eeeeeecccc
Q psy11549 233 VNAKGRSLPVI-WDDFSMSGAH 253 (261)
Q Consensus 233 ~N~~G~~~~s~-~~~~~~~~~~ 253 (261)
.|..|.+.+|. .+.+......
T Consensus 93 ~n~~G~g~~S~~~~~~~t~~~~ 114 (118)
T 2yrz_A 93 QSQEGWGREREGVITIESQVSG 114 (118)
T ss_dssp EESSCEEEEEEEEEECCCSCCC
T ss_pred EcCCcCCCCcCCceEeCCCCCC
Confidence 99999999988 5555544433
No 469
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.25 E-value=2.2e-11 Score=79.43 Aligned_cols=86 Identities=21% Similarity=0.348 Sum_probs=58.4
Q ss_pred eeceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC---ceEEeCCceeEEEEe-----cCCCCc
Q psy11549 57 YAPICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS---ERFSSGSRGSMLRYT-----PVTELD 128 (261)
Q Consensus 57 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~---~~~~~~~~~~~l~i~-----~~~~~d 128 (261)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.| .+.|++++......... ........ .+.+. ++..+|
T Consensus 8 ~pP~i~~~p~~-~~v~~G~~v~L~C~~~g~P~p-~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~~~D 83 (117)
T 2v9t_A 8 FPPRIVEHPSD-LIVSKGEPATLNCKAEGRPTP-TIEWYKGGERVETDKDDPRSHRMLLPSG--SLFFLRIVHGRKSRPD 83 (117)
T ss_dssp EEEEEEECCCC-EEECTTCCEEECCEEEEESCC-EEEEEETTEECCCTTTCSSCSEEECTTS--CEEESSCCCBTTBCSS
T ss_pred CCCeeEcCCCC-EEEcCCCcEEEEEECCccCCC-eEEEEECCEeccccCCCCcceeEEecCC--cEEEEEEEeCCCCcCc
Confidence 56666655444 678899999999999999988 79999987432211111 11122222 22222 557899
Q ss_pred CeEEEEEEEcCCceEEee
Q psy11549 129 YGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 129 ~g~y~C~~~~~~~~~~~~ 146 (261)
+|.|+|.|.|..|.....
T Consensus 84 ~G~Y~C~a~N~~G~~~s~ 101 (117)
T 2v9t_A 84 EGVYVCVARNYLGEAVSH 101 (117)
T ss_dssp CEEEEEEEEETTEEEECC
T ss_pred CEEEEEEEEeCccceEee
Confidence 999999999999987653
No 470
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.25 E-value=3.8e-10 Score=83.94 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=91.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc--------------cCCceEEeC---CceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD--------------VGSERFSSG---SRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~--------------~~~~~~~~~---~~~~~l~i~~~~~~d~g~ 131 (261)
+.+..|++++|.|.+.. +.+ .+.|++...+.... ....++... .....|.|.++..+|+|.
T Consensus 13 v~v~~G~~v~L~C~~~~-~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 90 (252)
T 1oga_E 13 LFRKEGQNVTLSCEQNL-NHD-AMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAF 90 (252)
T ss_dssp EEEETTCCEEECCEECS-CCS-EEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEE
T ss_pred EEEcCCCcEEEEEEeCC-CCC-EEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEE
Confidence 67889999999999853 344 89999864321110 012344332 234579999999999999
Q ss_pred EEEEEEcCC---ceEEeeEEEEEEeC-CCCCCCCcceEEe------ecCCeEEEEeecCCCCCCCe-EEEEEEEeCCccc
Q psy11549 132 LSCAAQNAI---GTQVTPCLYQVVLA-GKPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQ-TFTLELYSASDLN 200 (261)
Q Consensus 132 y~C~~~~~~---~~~~~~~~~~v~~~-~~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~-~~~~~~~~~~~~~ 200 (261)
|.|.+.+.. ........+.|... ..+.+|. +.+.. ..|..++|.|.+ .+..|. ..+.|+++.....
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~-v~~~~~~~~~~~~g~~~~L~C~~--~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 91 YLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPE-VAVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp EEEEEESSTTSCCEECCCEEEEEESCGGGCBCCE-EEEECCCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEEEC
T ss_pred EEEEEecCCccceeECCCEEEEEecccCCCCCCe-EEEECCChhhhccCCceEEEEEE--eeEcCCCcEEEEEECCEECC
Confidence 999999851 11122223444321 1122332 22221 147899999997 444453 3344444432211
Q ss_pred eeEEEe--------cCCCCc------EEEcCCCC-CCccEEEEEEEEEcCCCcCC
Q psy11549 201 LLVNLT--------NLDTPA------FTLEDLGL-DGTVLMRVVISGVNAKGRSL 240 (261)
Q Consensus 201 ~~~~~~--------~~~~~~------~~i~~~~l-~~~~~Y~~~~~a~N~~G~~~ 240 (261)
...... ...... +.|..... .+++.| +|.+.|..+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~y--tC~v~~~~l~~~ 220 (252)
T 1oga_E 168 SGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHF--RCQVQFYGLSEN 220 (252)
T ss_dssp SSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEE--EEEEEECCBCTT
T ss_pred CCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEE--EEEEEcCCCCCC
Confidence 111110 012222 44544112 256789 999999876544
No 471
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.25 E-value=5.4e-11 Score=76.68 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=73.8
Q ss_pred CCCCCCCCcceE-EeecCCeEEEEeecC-CCCCCCe-EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEE
Q psy11549 154 AGKPQPPQNCSV-RNETTSSVHISCTPG-YDGGLPQ-TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVI 230 (261)
Q Consensus 154 ~~~p~~p~~~~v-~~~~~~~~~l~c~~~-~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~ 230 (261)
..+|.+|..+.+ .......+.|.|.++ .+++.++ .|.++++........ .........++|.+ |.++..|.|+|
T Consensus 6 ~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~v~~--L~p~t~Y~frV 82 (110)
T 2crz_A 6 SGPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPR-EVYQGSEVECTVSS--LLPGKTYSFRL 82 (110)
T ss_dssp CCCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCE-EEEEESCSEEEEES--CCTTCEEEECC
T ss_pred CCCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceE-EEEeCCcEEEEECC--cCCCCEEEEEE
Confidence 367888888887 445678999999754 4556664 599998865444211 22234568899999 99999999999
Q ss_pred EEEcCCCcCCceeeeeeeeccccc
Q psy11549 231 SGVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 231 ~a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
.|.|..|.+.+|..+.+.+....+
T Consensus 83 ~A~n~~G~g~~S~~~~~~T~~~~P 106 (110)
T 2crz_A 83 RAANKMGFGPFSEKCDITTAPGSG 106 (110)
T ss_dssp EEECSSCBCCCCCCEEEECCCSCC
T ss_pred EEEcCCccCCCCCccccccCCCCC
Confidence 999999999999988887665443
No 472
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.25 E-value=1.3e-10 Score=76.30 Aligned_cols=87 Identities=23% Similarity=0.350 Sum_probs=59.0
Q ss_pred EEeeCCCcEEEEEEEeeCCC-CceeEEEEcCCcccc----ccCCceEEeC---CceeEEEEecCCCCcCeEEEEEEEcCC
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSFKWKFNNSGETL----DVGSERFSSG---SRGSMLRYTPVTELDYGTLSCAAQNAI 140 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~~~~~~----~~~~~~~~~~---~~~~~l~i~~~~~~d~g~y~C~~~~~~ 140 (261)
+.+..|+++.|.|.+.+.|. +..+.|++++..... ......+... ...+.|.|.++..+|+|.|+|.|.|..
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 97 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 97 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSS
T ss_pred EEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCC
Confidence 56778999999999998543 238999987752110 0111111111 134579999999999999999999999
Q ss_pred ceEEeeEEEEEEeCCCC
Q psy11549 141 GTQVTPCLYQVVLAGKP 157 (261)
Q Consensus 141 ~~~~~~~~~~v~~~~~p 157 (261)
|....... +.|..+|
T Consensus 98 g~~~~~~~--l~V~~~p 112 (122)
T 3s35_X 98 MTKKNSTF--VRVHEKP 112 (122)
T ss_dssp CEEEEEEE--EEEEEEE
T ss_pred CceEEEEE--EEEeccC
Confidence 88776444 4444444
No 473
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.24 E-value=1.3e-10 Score=76.15 Aligned_cols=98 Identities=18% Similarity=0.168 Sum_probs=74.6
Q ss_pred CCCCCCCCcceEE-eecCCeEEEEeecCCCC-CCC-eEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEE
Q psy11549 154 AGKPQPPQNCSVR-NETTSSVHISCTPGYDG-GLP-QTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVV 229 (261)
Q Consensus 154 ~~~p~~p~~~~v~-~~~~~~~~l~c~~~~~~-~~p-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~ 229 (261)
...|.+|..+.+. ......+.|.|.++.+. +.+ ..|.++++...... .| .........++|.+ |.+++.|.|+
T Consensus 15 ~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~v~~--L~p~t~Y~fr 91 (120)
T 2crm_A 15 PDKPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGN-KWEMIYSGATREHLCDR--LNPGCFYRLR 91 (120)
T ss_dssp CCCCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSC-CCEEEECSSCSEEEECS--CCTTSCEEEE
T ss_pred CCCCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCc-CCEEEEeccccEEEECC--CCCCCEEEEE
Confidence 4667788777776 56788999999976544 555 45999988765421 23 33334568899999 9999999999
Q ss_pred EEEEcCCCcCCceeeeeeeeccccc
Q psy11549 230 ISGVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 230 ~~a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
|.|.|..|.+.+|..+.+++....+
T Consensus 92 V~A~n~~G~s~~S~~~~~~T~~~~p 116 (120)
T 2crm_A 92 VYCISDGGQSAVSESLLVQTPAVSG 116 (120)
T ss_dssp EEEEETTEECCCCCCCCCCCCCCSC
T ss_pred EEEEcCCccCCCcccEEEEcCCCCC
Confidence 9999999999999988887765443
No 474
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.24 E-value=4.3e-11 Score=77.24 Aligned_cols=96 Identities=8% Similarity=-0.036 Sum_probs=74.9
Q ss_pred CCCCCCCcceEEeecCCeEEEEeecCCCCCCC-eEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEE
Q psy11549 155 GKPQPPQNCSVRNETTSSVHISCTPGYDGGLP-QTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGV 233 (261)
Q Consensus 155 ~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~ 233 (261)
..|.+|.++.+.......+.|.|.++...+.+ ..|.++|+..+.....+.........+.|.+ |.++..|.|+|.|.
T Consensus 9 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~ 86 (111)
T 1x5l_A 9 AAPSQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLKAVTTRATVSG--LKPGTRYVFQVRAR 86 (111)
T ss_dssp CCCCCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEEESSSEEEECS--CCTTCEEEECEEEE
T ss_pred CCCCCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEecCCCCEEEEcC--CCCCCEEEEEEEEE
Confidence 56778888877777889999999976554444 5699998876533323333344568899999 99999999999999
Q ss_pred cCCCcCCceeeeeeeeccc
Q psy11549 234 NAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 234 N~~G~~~~s~~~~~~~~~~ 252 (261)
|..|.+.+|..+.+++...
T Consensus 87 n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 87 TSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp ETTEECCCCCCEEEECCCT
T ss_pred eCCcCCCCcccEEEEcCCC
Confidence 9999999999998877644
No 475
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=7e-12 Score=78.78 Aligned_cols=75 Identities=19% Similarity=0.324 Sum_probs=57.0
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCL 148 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~ 148 (261)
..+..|+.+.|.|.+.+.|.+ .+.|++++.. +... ....|.|.++..+|+|.|+|.+.|..+....+..
T Consensus 20 ~~v~~G~~v~l~C~~~g~p~~-~v~W~k~~~~--~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~ 88 (96)
T 2ens_A 20 GAVAPGGTVTLTCEVPAQPSP-QIHWMKDGVP--LPLP--------PSPVLILPEIGPQDQGTYSCVATHSSHGPQESRA 88 (96)
T ss_dssp SEECTTCEEEEECCCSSCSSC-CCCCEESSSB--CSSC--------CCSEEEEESCCTTTCEEEECEECCSSCCCEECCC
T ss_pred CEEcCCCeEEEEEEEccCCCC-EEEEEECCEE--CcCC--------CCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEE
Confidence 346799999999999998887 8999997742 2111 1347999999999999999999997655444445
Q ss_pred EEEEeC
Q psy11549 149 YQVVLA 154 (261)
Q Consensus 149 ~~v~~~ 154 (261)
+.|.+.
T Consensus 89 ~~v~V~ 94 (96)
T 2ens_A 89 VSISII 94 (96)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666554
No 476
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=6.3e-12 Score=81.81 Aligned_cols=95 Identities=16% Similarity=0.172 Sum_probs=64.0
Q ss_pred eEEEEEEeec-eeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCC-ceEE-eCCceeEEEEecCCC
Q psy11549 50 QLKLRVKYAP-ICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGS-ERFS-SGSRGSMLRYTPVTE 126 (261)
Q Consensus 50 ~~~l~V~~~p-~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~-~~~~-~~~~~~~l~i~~~~~ 126 (261)
.+.|.|..+| .+...... +.+.+|+.+.|.|.+.+.|.| .+.|++++.. +.... ..+. ..+....|.|.++..
T Consensus 4 ~a~l~V~~~p~~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p-~v~W~k~g~~--l~~~~~~~~~~~~~~~~~L~I~~v~~ 79 (115)
T 2cr6_A 4 GSSGLVQGRRVHIIEDLED-VDVQEGSSATFRCRISPANYE-PVHWFLDKTP--LHANELNEIDAQPGGYHVLTLRQLAL 79 (115)
T ss_dssp CCCCCCCSSCCEEEECCCE-EEEETTSCEECCCEEESTTCC-SCEEEESSCE--ECCSSSCCBCCBTTTBCCBEECSCCT
T ss_pred cEEEEEcCCCCeEeccCcc-EEEeCCCcEEEEEEEcCCCCC-ccEEEECCEE--CCCCCcEEEEEcCCCEEEEEEcCCCh
Confidence 3456666555 34444443 778899999999999998887 7999998742 22211 1222 124455799999999
Q ss_pred CcCeEEEEEEEcCCceEEeeEEEEEE
Q psy11549 127 LDYGTLSCAAQNAIGTQVTPCLYQVV 152 (261)
Q Consensus 127 ~d~g~y~C~~~~~~~~~~~~~~~~v~ 152 (261)
+|+|.|+|.+ |.....+.+.|.
T Consensus 80 ~D~G~Y~C~~----g~~~~~~~L~V~ 101 (115)
T 2cr6_A 80 KDSGTIYFEA----GDQRASAALRVT 101 (115)
T ss_dssp TTCEEEEEEE----TTEECCEEEEEE
T ss_pred hhCEEEEEEE----CCeeEEEEEEEE
Confidence 9999999993 344444444444
No 477
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.24 E-value=2.5e-11 Score=78.98 Aligned_cols=98 Identities=10% Similarity=-0.025 Sum_probs=70.7
Q ss_pred EEeCCCCCCCCcceEEeecCCeEEEEeecCCCCC----CC--eEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCc
Q psy11549 151 VVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGG----LP--QTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGT 223 (261)
Q Consensus 151 v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~----~p--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~ 223 (261)
+.+..+|.+|....+.....+.++|.|.++.+++ .+ ..|.++....... .| .........++|.+ |.++
T Consensus 10 ~~~~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~--~~~~v~~~~~t~~~v~g--L~p~ 85 (120)
T 1wfu_A 10 PHKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMH--SYGVIYTGYATRHVVEG--LEPR 85 (120)
T ss_dssp CTTCCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTC--CEEEEEEESCSEEEEES--CCTT
T ss_pred EEeeCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCC--ceEEEecCCccEEEECC--CCCC
Confidence 3444556655555555567999999999876543 44 3599984432333 34 33333457899999 9999
Q ss_pred cEEEEEEEEEcCCCcCCceeeeeeeeccc
Q psy11549 224 VLMRVVISGVNAKGRSLPVIWDDFSMSGA 252 (261)
Q Consensus 224 ~~Y~~~~~a~N~~G~~~~s~~~~~~~~~~ 252 (261)
+.|.|+|.|.|..|.+.+|..+.+++...
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 86 TLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp CEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred CEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 99999999999999999999988877643
No 478
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.24 E-value=8.1e-11 Score=87.60 Aligned_cols=162 Identities=12% Similarity=0.091 Sum_probs=87.2
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc----cC----------Cc-eEEe--CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD----VG----------SE-RFSS--GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~----~~----------~~-~~~~--~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+..|++++|.|.+.+.+.+ .+.|++...+.... .. .. ++.. ..... |.|.++..+|+|.
T Consensus 11 v~v~~G~~v~L~C~~~~~~~~-~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~ 88 (253)
T 3to4_D 11 RLVPRGQAVNLRCILKNSQYP-WMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRT 88 (253)
T ss_dssp EEEESSCCEEEEEECSCTTCC-CEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEE
T ss_pred EEEeCCCcEEEEEEeCCCCcc-eEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeE
Confidence 668899999999998877766 79999732211110 00 00 3322 11222 9999999999999
Q ss_pred EEEEEEcCCc------eEEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCeE-EEEEEEeCC
Q psy11549 132 LSCAAQNAIG------TQVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQT-FTLELYSAS 197 (261)
Q Consensus 132 y~C~~~~~~~------~~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~ 197 (261)
|+|.+.+..+ .......+.+.... .+.+|.. .+.. ..+..++|.|.+ .+..|.. .+.|+++..
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v-~~~~~~~~~~~~g~~~~L~C~~--~g~~P~~i~v~W~k~g~ 165 (253)
T 3to4_D 89 LYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEV-AVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGK 165 (253)
T ss_dssp EEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEE-EEEECCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTE
T ss_pred EEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeE-EEeCCChhhcccCCceEEEEEE--ceEECCcEEEEEEECCE
Confidence 9999986543 11122234443211 2233332 2221 125899999997 4434533 334444322
Q ss_pred ccceeEEEec--------CCCC------cEEEcCCCCCC-ccEEEEEEEEEcCCC
Q psy11549 198 DLNLLVNLTN--------LDTP------AFTLEDLGLDG-TVLMRVVISGVNAKG 237 (261)
Q Consensus 198 ~~~~~~~~~~--------~~~~------~~~i~~~~l~~-~~~Y~~~~~a~N~~G 237 (261)
.......... .... .+.|......+ ++.| +|.+.|..-
T Consensus 166 ~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~y--tC~v~h~~l 218 (253)
T 3to4_D 166 EVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF--RCQVQFYGL 218 (253)
T ss_dssp EECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEE--EEEEEECCB
T ss_pred ECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEE--EEEEEeCCC
Confidence 2111111000 0122 34444422334 6789 888888754
No 479
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.24 E-value=1.1e-10 Score=74.92 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=73.7
Q ss_pred CCCCCCCcceEEe--ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEE
Q psy11549 155 GKPQPPQNCSVRN--ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVIS 231 (261)
Q Consensus 155 ~~p~~p~~~~v~~--~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~ 231 (261)
..|.+|.++.+.. .....+.|.|.++...+.++. |.+.|+..... .|.........++|.+ |.+++.|.|+|.
T Consensus 6 ~~P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~l~~--L~p~t~Y~~~V~ 81 (108)
T 2dm4_A 6 SGPDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSK--MWASQRAASNFTEIKN--LLVNTLYTVRVA 81 (108)
T ss_dssp CCTTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCS--CCEEEEESSSEEEECS--CCSSCEEEEEEE
T ss_pred CCCcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCC--CeEEecCCccEEEeCC--CCCCCEEEEEEE
Confidence 5677888887765 468899999998665555554 99998876554 2322223457999999 999999999999
Q ss_pred EEcCCCcCCceeeeeeeecccc
Q psy11549 232 GVNAKGRSLPVIWDDFSMSGAH 253 (261)
Q Consensus 232 a~N~~G~~~~s~~~~~~~~~~~ 253 (261)
|.|..|.+.+|..+.+++....
T Consensus 82 A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2dm4_A 82 AVTSRGIGNWSDSKSITTIKGS 103 (108)
T ss_dssp EEESSCEEEECCCEEEECCSCS
T ss_pred EECCCceeCCCCCEEEECCCCC
Confidence 9999999999999988875443
No 480
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.24 E-value=3.2e-09 Score=76.28 Aligned_cols=130 Identities=13% Similarity=0.024 Sum_probs=93.6
Q ss_pred EEEEecCCCCcCeEEEEEEEcCCceEEee---EEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCC--C-CCCCeEEEE
Q psy11549 118 MLRYTPVTELDYGTLSCAAQNAIGTQVTP---CLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGY--D-GGLPQTFTL 191 (261)
Q Consensus 118 ~l~i~~~~~~d~g~y~C~~~~~~~~~~~~---~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~--~-~~~p~~~~~ 191 (261)
.+.+ ++.....+.|+..|.|..|....+ ..+......++.+|.++.+.......+.|+|.++. . ++.-..|.+
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v 142 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYV 142 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEE
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEE
Confidence 4555 888888888889999987765432 23333333444678888888878899999999764 3 334456999
Q ss_pred EEEeCCccc-eeE-EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCC-ceeeeeeeec
Q psy11549 192 ELYSASDLN-LLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSL-PVIWDDFSMS 250 (261)
Q Consensus 192 ~~~~~~~~~-~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~-~s~~~~~~~~ 250 (261)
.|+..+... ... .........+.|.+ |.++..|.|+|.|.|..|.|. .|..+.+++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 143 SWKRDIPAAAWENNNIFDWRQNNIVIAD--QPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp EEEESSTTCCCEEEEECCTTCCEEEECS--CCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred EEEECCCCCCcEEEEecCCCccEEEEcC--CCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 988766542 111 22222468899999 999999999999999999999 4777777654
No 481
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.23 E-value=1.3e-10 Score=83.84 Aligned_cols=117 Identities=13% Similarity=0.141 Sum_probs=69.8
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCC---------cc-eeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKG---------EA-TSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP- 88 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~---------~~-~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~- 88 (261)
.+|.|.+++.+|+|.|.|.+.+..+ .. ....+.|.|...+.....+. +.+..+ .+.|.|.+.+.++
T Consensus 71 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~--v~~~~~-~~~l~C~~~g~~P~ 147 (207)
T 1ypz_E 71 STLHIRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPS--VFIMKN-GTNVACLVKDFYPK 147 (207)
T ss_dssp EEEEECSCCGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCE--EEEEEE-TTEEEEEEEEESSS
T ss_pred EEEEECCCCHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCCCCe--EEEeCC-CCeEEEEEeeEeCC
Confidence 3899999999999999999987642 11 12345788864322221221 122222 3799999997654
Q ss_pred CceeEEEEcCCccccccCCceEEeCCceeEEEEecCCC-CcCeEEEEEEEcCCceE
Q psy11549 89 ARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTE-LDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 89 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~g~y~C~~~~~~~~~ 143 (261)
+..+.|+++ .. +............ ..+.+..... ++.|.|+|.+.+..+..
T Consensus 148 ~~~v~W~~~-~~--l~~~~~~~~~~~~-g~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 148 EVTISLRSS-KK--IVEFDPAIVISPS-GKYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp CCEEEEECS-SE--EEECCCEEEECTT-SSEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred CeEEEEecC-Cc--ccCCccceEEcCC-CcEEEEEeecccCCCcEEEEEEECCccE
Confidence 348999987 42 2111122211111 1234434444 67899999999987543
No 482
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.23 E-value=2.5e-10 Score=84.16 Aligned_cols=122 Identities=15% Similarity=0.171 Sum_probs=71.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccc--------------cCCceEEe---CCceeEEEEecCCCCcCeE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLD--------------VGSERFSS---GSRGSMLRYTPVTELDYGT 131 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~--------------~~~~~~~~---~~~~~~l~i~~~~~~d~g~ 131 (261)
+.+..|+.++|.|.+.. +.+ .+.|++...+.... ....++.. ......|.|.++..+|+|.
T Consensus 9 v~v~~G~~v~L~C~~~~-~~~-~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 86 (238)
T 1bec_A 9 KVAVTGGKVTLSCQQTN-NHN-NMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSV 86 (238)
T ss_dssp EEEETTCCEEEEEEESS-CCS-EEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEE
T ss_pred eEEeCCCcEEEEEEeCC-CCc-eEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEE
Confidence 66889999999999853 444 89999865321110 01123322 2345689999999999999
Q ss_pred EEEEEEcCCc---e--EEeeEEEEEEeCC-CCCCCCcceEEe------ecCCeEEEEeecCCCCCCCe-EEEEEEEe
Q psy11549 132 LSCAAQNAIG---T--QVTPCLYQVVLAG-KPQPPQNCSVRN------ETTSSVHISCTPGYDGGLPQ-TFTLELYS 195 (261)
Q Consensus 132 y~C~~~~~~~---~--~~~~~~~~v~~~~-~p~~p~~~~v~~------~~~~~~~l~c~~~~~~~~p~-~~~~~~~~ 195 (261)
|.|.+.+..+ . ......+.|.... .+.+|. +.+.. ..|..++|.|.+ .+..|. ..+.|+++
T Consensus 87 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~-v~~~~~~~~~~~~g~~~~L~C~~--~g~~P~~~~v~W~~~ 160 (238)
T 1bec_A 87 YFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPK-VSLFEPSKAEIANKQKATLVCLA--RGFFPDHVELSWWVN 160 (238)
T ss_dssp EEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCE-EEEECCCSTTCSSSCSCSEEEEE--EEEBSCCEEEEEEET
T ss_pred EEEEEecCCCCccccccCCCEEEEEeccCCCCCCCc-eEEECCChHHcccCCceEEEEEE--eeEeCCCcEEEEEEC
Confidence 9999998632 1 1122234443311 112332 12211 248899999997 444343 23344443
No 483
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.4e-11 Score=78.17 Aligned_cols=76 Identities=16% Similarity=0.186 Sum_probs=56.1
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccC----CceEEeCCceeEEEEecCCCCcCeEEEE
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVG----SERFSSGSRGSMLRYTPVTELDYGTLSC 134 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~g~y~C 134 (261)
|.+...... ..+..|+.+.|.|.+.+.+ + .+.|++++..... .. ...+...+....|.|.++..+|+|.|+|
T Consensus 9 ~~~~~~~~~-~~v~~G~~v~l~C~~~~~~-~-~v~W~k~g~~i~~-~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 84 (101)
T 2edk_A 9 VLIVTPLED-QQVFVGDRVEMAVEVSEEG-A-QVMWMKNGVELTR-EDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQV 84 (101)
T ss_dssp CCEEECCCC-EEEESSCCCBCCEEESCSS-C-CCEEEESSCBCCC-SCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEE
T ss_pred CEEEecCCc-eEEcCCCCEEEEEEEeCCC-C-EEEEEECCEECCC-CCCcceeEEEEECCCEEEEEECCCChhhCEEEEE
Confidence 334433333 6788999999999999887 5 8999998753221 12 2234445556689999999999999999
Q ss_pred EEEc
Q psy11549 135 AAQN 138 (261)
Q Consensus 135 ~~~~ 138 (261)
.+.|
T Consensus 85 ~a~n 88 (101)
T 2edk_A 85 ITNG 88 (101)
T ss_dssp ECSS
T ss_pred EEcC
Confidence 9987
No 484
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.23 E-value=1.4e-12 Score=94.64 Aligned_cols=122 Identities=14% Similarity=0.103 Sum_probs=71.8
Q ss_pred CCeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEE---EEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEE
Q psy11549 19 NQSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLR---VKYAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKW 94 (261)
Q Consensus 19 ~~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~---V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W 94 (261)
..+|.|.+++.+|+|.|+|.+.+..+.. .....|. +..+|.+.........+..|+.+.|.|.+.+.++ +..+.|
T Consensus 65 ~~~L~I~~~~~~D~g~Y~C~~~~~~~~~-~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W 143 (214)
T 1ow0_A 65 SSVLPGCAEPWNHGKTFTCTAAYPESKT-PLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRW 143 (214)
T ss_dssp EEECTTTHHHHHHTCEEEEEECCSSCSS-CEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEE
T ss_pred EEEEEEeHHHcCCCCeEEEEEecCCCCC-ceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEE
Confidence 3479999999999999999999887643 2222332 2345544321111012457889999999998644 458999
Q ss_pred EEcCCcccccc-CCceEEeC----Cc----eeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 95 KFNNSGETLDV-GSERFSSG----SR----GSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 95 ~~~~~~~~~~~-~~~~~~~~----~~----~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
++++....... ........ +. .+.|.+.....++.|.|+|.|.|...
T Consensus 144 ~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 144 LQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred EECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 99874321110 00011111 21 12333443333458999999999653
No 485
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.23 E-value=5.6e-11 Score=87.27 Aligned_cols=172 Identities=11% Similarity=0.134 Sum_probs=91.1
Q ss_pred EEeeCCCcEEEEEEEeeCCC-Ccee--EEEEcCCccccc-c-----------------CCceEEe----CCceeEEEEec
Q psy11549 69 VGASRSESVDIHCAVEADPP-ARSF--KWKFNNSGETLD-V-----------------GSERFSS----GSRGSMLRYTP 123 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~-~~~~--~W~~~~~~~~~~-~-----------------~~~~~~~----~~~~~~l~i~~ 123 (261)
+.+..|++++|.|.+.+.+. ...+ .|++...+.... + ...++.. ......|.|.+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 89 (232)
T 3qhz_H 10 ALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTN 89 (232)
T ss_dssp SEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECS
T ss_pred EEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECc
Confidence 44679999999999976432 1145 999743221110 0 0123322 23455799999
Q ss_pred CCCCcCeEEEEEEEcCC--------ceEEeeEEEEEEeCCCCCCCCcceE----EeecCCeEEEEeecCCCCCCCeE-EE
Q psy11549 124 VTELDYGTLSCAAQNAI--------GTQVTPCLYQVVLAGKPQPPQNCSV----RNETTSSVHISCTPGYDGGLPQT-FT 190 (261)
Q Consensus 124 ~~~~d~g~y~C~~~~~~--------~~~~~~~~~~v~~~~~p~~p~~~~v----~~~~~~~~~l~c~~~~~~~~p~~-~~ 190 (261)
+..+|+|.|.|.+.+.. ........+.+.. .++.+|..... ....|..++|.|.+ .+..|.. ..
T Consensus 90 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~-~~~~~P~v~~~~~~~~~~~g~~v~L~C~~--~~~~P~~~~v 166 (232)
T 3qhz_H 90 MDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS-ASTKGPSVFPLAPSSKSTSGGTAALGCLV--KDYFPEPVTV 166 (232)
T ss_dssp CCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS-SCCBCCEEEEECC-------CEEEEEEEE--EEEBSSCCEE
T ss_pred CChhhCEEEEEEEeeccCccccccceeeCCCeEEEEec-CCCCCCEEEEecccccccCCCcEEEEEEE--eeEeCCCeEE
Confidence 99999999999999753 1122222333332 23333322111 12348999999997 3434433 22
Q ss_pred EEEEeCCccceeE--EEecCCC-----CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeee
Q psy11549 191 LELYSASDLNLLV--NLTNLDT-----PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 191 ~~~~~~~~~~~~~--~~~~~~~-----~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~ 246 (261)
.|++......... ....... ..+.|......+ +.| +|.|.|..+.......+.
T Consensus 167 ~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~y--tC~v~~~~~~~~~~~~l~ 226 (232)
T 3qhz_H 167 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSNTKVDKRVE 226 (232)
T ss_dssp EEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCC--EEEEEEGGGTEEEEEECC
T ss_pred EEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEE--EEEEEeCCCCccEEEEeC
Confidence 3433332111111 1111111 245666644556 788 999999987655444443
No 486
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.6e-10 Score=72.88 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=74.6
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEEEEeCCccceeE-EEecCCCCcEEEcCCCCCCccEEEEEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLELYSASDLNLLV-NLTNLDTPAFTLEDLGLDGTVLMRVVISG 232 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a 232 (261)
...|.+|.++.+.......+.|.|.++ .++....|.+.|+...... .| .........+.|.+ |.+++.|.|+|.|
T Consensus 5 ~~~P~~P~~~~~~~~~~~sv~l~W~~~-~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A 80 (106)
T 2dju_A 5 SSGPKPPIDLVVTETTATSVTLTWDSG-NSEPVTYYGIQYRAAGTEG-PFQEVDGVATTRYSIGG--LSPFSEYAFRVLA 80 (106)
T ss_dssp CCSCCCCEEEEEEEEETTEEEEEEECC-CSSCCSEEEEEEEETTCCS-CCCCBCCCCSSEEEEES--CCTTCEEEEEEEE
T ss_pred CcCCcCCCCcEEEeccCCEEEEEEcCC-CCCCceEEEEEEEECCCCC-CeEEccCCCccEEEEeC--CCCCcEEEEEEEE
Confidence 467889988888888899999999974 2233355999887765432 22 22333567899999 9999999999999
Q ss_pred EcCCCcCCceeeeeeeeccccc
Q psy11549 233 VNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 233 ~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
.|..|.+.+|..+.+++....+
T Consensus 81 ~n~~G~~~~S~~~~~~T~~~~P 102 (106)
T 2dju_A 81 VNSIGRGPPSEAVRARTGEQSG 102 (106)
T ss_dssp ECSSCBCCCCCCEEEECCCSSC
T ss_pred EeCCccCCCcccEEeEcCCCCC
Confidence 9999999999988887665444
No 487
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=1.2e-10 Score=76.50 Aligned_cols=100 Identities=10% Similarity=0.036 Sum_probs=74.9
Q ss_pred CCCCCCCCcceEEeecCCeEEEEeecCCCCC-CCe----EEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEE
Q psy11549 154 AGKPQPPQNCSVRNETTSSVHISCTPGYDGG-LPQ----TFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 154 ~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~-~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
..+|.+|.++++.......+.|+|..+.... ... .|.+.|+........+.........++|.+ |++++.|+|
T Consensus 16 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~v~g--L~P~T~Y~f 93 (123)
T 2edd_A 16 STPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDTTSLSYTATG--LKPNTMYEF 93 (123)
T ss_dssp CCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEESSSEEEEES--CCTTCEEEE
T ss_pred CCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeCCceEEEecC--CCCCCEEEE
Confidence 3577789999998888999999999643222 112 699988775332222322222368899999 999999999
Q ss_pred EEEEEcCCCcCCceeeeeeeeccc-ccC
Q psy11549 229 VISGVNAKGRSLPVIWDDFSMSGA-HYA 255 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~~~~~~~-~~~ 255 (261)
+|.|.|..|.|.+|..+.+++... .+.
T Consensus 94 ~V~A~n~~g~g~~S~~v~~~T~~~~~Ps 121 (123)
T 2edd_A 94 SVMVTKNRRSSTWSMTAHATTYEASGPS 121 (123)
T ss_dssp EEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred EEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence 999999999999999998887766 544
No 488
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.23 E-value=1.6e-10 Score=72.36 Aligned_cols=65 Identities=12% Similarity=0.172 Sum_probs=49.3
Q ss_pred EEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 69 VGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
+.+..|+.+.|.|.+ +.+.+ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.+
T Consensus 18 ~~v~~G~~v~l~C~~-~~p~~-~v~W~k~~~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 18 VEVAAGSPAVFEAET-ERAGV-KVRWQRGGSDIS-ASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp EEEETTSCEEEEEEC-SSSSC-CCEEECSSSEEC-SSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred EEEeCCCcEEEEEEe-CCCCC-eEEEEECCEECC-CCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 678899999999999 66666 899999874211 122223334445568999999999999999999
No 489
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=1.3e-10 Score=73.96 Aligned_cols=94 Identities=17% Similarity=0.284 Sum_probs=61.3
Q ss_pred eceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEE
Q psy11549 58 APICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQ 137 (261)
Q Consensus 58 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~ 137 (261)
+|.+...... +.+..|+.+.|.|.+ +.|.+ .+.|++++.... ......+...+....|.|.++..+|+|.|+|.
T Consensus 8 pp~~~~~~~~-~~v~~G~~v~l~C~~-~~p~~-~v~W~k~~~~l~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-- 81 (103)
T 2dku_A 8 ANCFTEELTN-LQVEEKGTAVFTCKT-EHPAA-TVTWRKGLLELR-ASGKHQPSQEGLTLRLTISALEKADSDTYTCD-- 81 (103)
T ss_dssp CCCCSSCCCC-EEEETTSEEEEEEEC-SSCCS-CCEEEESSCBCC-SSSSEEEEEETTEEEEEEESCCTTTCSEEEEE--
T ss_pred CCEeEecCCc-EEEeCCCcEEEEEEe-CCCCC-eEEEEeCCEECC-CCCeEEEEeCCCEEEEEECCCCcccCEEEEEE--
Confidence 3444444443 678899999999994 66666 899999874321 11122223344455899999999999999998
Q ss_pred cCCceEEeeEEEEEEeCCCCCCCC
Q psy11549 138 NAIGTQVTPCLYQVVLAGKPQPPQ 161 (261)
Q Consensus 138 ~~~~~~~~~~~~~v~~~~~p~~p~ 161 (261)
.|..... ..+.|..+|.+|.
T Consensus 82 --~g~~~~~--~~l~V~~~p~~p~ 101 (103)
T 2dku_A 82 --IGQAQSR--AQLLVQGRRSGPS 101 (103)
T ss_dssp --CSSCBCC--EEEEEECSCCCCS
T ss_pred --eCCceEE--EEEEEeCccCCCC
Confidence 3444443 3444445665553
No 490
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.22 E-value=5e-08 Score=73.63 Aligned_cols=210 Identities=12% Similarity=0.096 Sum_probs=132.9
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCC-CceeEEEEcC
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPP-ARSFKWKFNN 98 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~-~~~~~W~~~~ 98 (261)
..+.|.++...-.-.++..|.|..|.. ....+.+..+|. .+............+.|.+....... .-.+.|...+
T Consensus 68 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s--~~~~~~~~t~p~--~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~ 143 (283)
T 1tdq_A 68 SQYSVQALRPGSRYEVSISAVRGTNES--DASSTQFTTEID--APKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLA 143 (283)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEEC--CCEEEEEECCCC--CCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETT
T ss_pred CEEEecCCCCCCEEEEEEEEECCCCCC--CCeeEEEECCCC--CCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCC
Confidence 467888887766666667777766553 223333332221 11121133345667778776553221 1134443322
Q ss_pred CccccccCCceEEeCCc---eeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEE
Q psy11549 99 SGETLDVGSERFSSGSR---GSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHI 175 (261)
Q Consensus 99 ~~~~~~~~~~~~~~~~~---~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l 175 (261)
.. .......... ...+.+.++.....+.|...|.+..|.... ..+.....|.+|.++.+.......+.|
T Consensus 144 ~~-----~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~---~~~~~~t~~~~P~~l~~~~~~~~sv~l 215 (283)
T 1tdq_A 144 GE-----QYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIP---ATMNARTELDSPRDLMVTASSETSISL 215 (283)
T ss_dssp CC-----CCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCC---EEEEEECCCCCCEEEEEEEECSSCEEE
T ss_pred CC-----cceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcc---eEEEecCCCCCCCccEEeEecCCEEEE
Confidence 11 1112222332 557889999999999999999987764332 233444566788888888778899999
Q ss_pred EeecCCCCCCCeEEEEEEEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeee
Q psy11549 176 SCTPGYDGGLPQTFTLELYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDD 246 (261)
Q Consensus 176 ~c~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~ 246 (261)
.|.+ ..+.-..|.+.|+..+... ...........+.|.+ |.++..|.|++.|.|..|.+.++....
T Consensus 216 ~W~~--p~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~~~~g~s~~~~~~a 281 (283)
T 1tdq_A 216 IWTK--ASGPIDHYRITFTPSSGIS-SEVTVPRDRTSYTLTD--LEPGAEYIISITAERGRQQSLESTVDA 281 (283)
T ss_dssp EEEC--CCSCCSEEEEEEECSSSCC-EEEEEESSCSEEEECC--CCTTCCEEEEEEEEETTEECCCEEEEE
T ss_pred EEeC--CCCcccEEEEEEEcCCCCe-eEEEeCCCccEEEECC--CCCCCEEEEEEEEEcCCCCCcceeeEe
Confidence 9997 3343456999888755432 2223344568899999 999999999999999999998876643
No 491
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.22 E-value=1.2e-10 Score=74.20 Aligned_cols=76 Identities=16% Similarity=0.209 Sum_probs=54.1
Q ss_pred ceeecCceeEEEeeCCCcEEEEEEEeeCCCCceeEEEEcCCccccccC--CceEEeCCceeEEEEecCCCCcCeEEEEEE
Q psy11549 59 PICKSDRIVIVGASRSESVDIHCAVEADPPARSFKWKFNNSGETLDVG--SERFSSGSRGSMLRYTPVTELDYGTLSCAA 136 (261)
Q Consensus 59 p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~ 136 (261)
|.+.........+..|+.+.|.|.+ +.|.+ .+.|++++.. +... ...+...+....|.|.++..+|+|.|+|.+
T Consensus 16 p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~-~v~W~k~g~~--l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 16 TAFQKKLEPAYQVSKGHKIRLTVEL-ADHDA-EVKWLKNGQE--IQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp SSCSEECCSEEEEETTSCEEEEEEC-SSSSS-CCEEEESSSE--ECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred CEEEEcCCCcEEEecCCCEEEEEEE-cCCCC-EEEEEECCEE--CCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 3343333333678899999999999 66666 7999998753 2222 223333455568999999999999999999
Q ss_pred Ec
Q psy11549 137 QN 138 (261)
Q Consensus 137 ~~ 138 (261)
.+
T Consensus 92 ~~ 93 (104)
T 1pd6_A 92 GG 93 (104)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 492
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.22 E-value=5e-11 Score=87.93 Aligned_cols=163 Identities=16% Similarity=0.120 Sum_probs=88.5
Q ss_pred eeCCCcEEEEEEEeeC---CCCceeEEEEcCCccccccCCceEEeC----CceeEEEEecCCCCcCeEEEEEEEcCCceE
Q psy11549 71 ASRSESVDIHCAVEAD---PPARSFKWKFNNSGETLDVGSERFSSG----SRGSMLRYTPVTELDYGTLSCAAQNAIGTQ 143 (261)
Q Consensus 71 ~~~g~~~~l~C~~~~~---~~~~~~~W~~~~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~ 143 (261)
+..|+.++|.|.+.+. |.+..+.|++++............... ...+.|.|.++..+|.|.|+|.+.+..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 4689999999999887 555589999987321100000000111 123478999999999999999999987653
Q ss_pred EeeEEEEEEeCCCCCCCCcceEEe-----ecCCeEEEEeecCCCCCCCeE-EEEEEEeCCccceeE--EEecCCCCcEEE
Q psy11549 144 VTPCLYQVVLAGKPQPPQNCSVRN-----ETTSSVHISCTPGYDGGLPQT-FTLELYSASDLNLLV--NLTNLDTPAFTL 215 (261)
Q Consensus 144 ~~~~~~~v~~~~~p~~p~~~~v~~-----~~~~~~~l~c~~~~~~~~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~i 215 (261)
.....+.+ +.....+|. +.+.. ..+..++|.|.+ .+..|.. .+.|+++........ ......+..|.+
T Consensus 109 ~~~~~v~~-~~~~~~~P~-v~v~~~~~~~~~g~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~ 184 (239)
T 1i1c_A 109 PIEKSISK-PEGTPRGPQ-VYTMAPPKEEMTQSQVSITCMV--KGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFL 184 (239)
T ss_dssp CEEEEECC-CSSCCBCCE-EEEECCCGGGGGSSEEEEEEEE--EEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEE
T ss_pred CcEEEEec-CCCCCcCCE-EEEECCChHHhcCCcEEEEEEE--eeeECCCeEEEEEECCEECCCceecCceECCCCCEEE
Confidence 22112211 112222332 12221 236789999997 4434532 334445433221111 111122333333
Q ss_pred cC-CCC-----CCccEEEEEEEEEcCCCcC
Q psy11549 216 ED-LGL-----DGTVLMRVVISGVNAKGRS 239 (261)
Q Consensus 216 ~~-~~l-----~~~~~Y~~~~~a~N~~G~~ 239 (261)
.. +.+ .+++.| +|.|.|.....
T Consensus 185 ~s~l~v~~~~~~~~g~Y--tC~v~n~~l~~ 212 (239)
T 1i1c_A 185 YSKLNVKKETWQQGNTF--TCSVLHEGLEN 212 (239)
T ss_dssp EEEEEEEHHHHHTTCCE--EEEEECTTSGG
T ss_pred EEEEEEChhhcCCCCEE--EEEEECCCCCC
Confidence 21 112 247889 99999988543
No 493
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.22 E-value=1.9e-08 Score=71.01 Aligned_cols=130 Identities=15% Similarity=0.002 Sum_probs=95.8
Q ss_pred CCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEeecCCCCCCCeEEEEE
Q psy11549 113 GSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISCTPGYDGGLPQTFTLE 192 (261)
Q Consensus 113 ~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c~~~~~~~~p~~~~~~ 192 (261)
......+.+.++.....+.|...+.+..+... ...+.....|.+|.++.+.......+.|+|.++ .+.-..|.+.
T Consensus 54 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~---~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p--~~~i~~Y~v~ 128 (186)
T 1qr4_A 54 PVDSTSFILRGLDAGTEYTISLVAEKGRHKSK---PTTIKGSTVVGSPKGISFSDITENSATVSWTPP--RSRVDSYRVS 128 (186)
T ss_dssp CTTCSEEEEESCCSSCEEEEEEEEESSSCBCC---CEEEEEECCCCCCSCEEEESCCSSCEEEEECCC--SSCCSEEEEE
T ss_pred CCCCCEEEECCCCCCCEEEEEEEEEcCCccCC---CEEEEEECCCCCCCccEEEEeCCCEEEEEEECC--CCcccEEEEE
Confidence 33445788999999999999999988644332 223444467889999988888899999999973 3334569998
Q ss_pred EEeCCccceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeee
Q psy11549 193 LYSASDLNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSM 249 (261)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~ 249 (261)
|+..................+.|.+ |.++..|.|++.|.|..|.+.+......+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 183 (186)
T 1qr4_A 129 YVPITGGTPNVVTVDGSKTRTKLVK--LVPGVDYNVNIISVKGFEESEPISGILKTA 183 (186)
T ss_dssp EEETTCCCCEEEEEETTCCEEEECS--CCSSCEEEEEEEEEETTEECCCEEEEEEC-
T ss_pred EEeCCCCCceEEEcCCCcCEEEEcC--CCCCCEEEEEEEEEcCCCcCcCEEEEEEec
Confidence 8876543323333344568999999 999999999999999999888766655443
No 494
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=99.21 E-value=4.3e-08 Score=77.07 Aligned_cols=213 Identities=9% Similarity=-0.013 Sum_probs=135.8
Q ss_pred CeEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCc--eeEEEEc
Q psy11549 20 QSLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPAR--SFKWKFN 97 (261)
Q Consensus 20 ~~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~--~~~W~~~ 97 (261)
..+.|.++...-.-.|+..|.|..|..... .+.....+. .+............+.|.+......... .+.|...
T Consensus 150 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s--~~~~~t~~~--~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~ 225 (375)
T 3t1w_A 150 GYYTVTGLEPGIDYDISVITLINGGESAPT--TLTQQTAVP--PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPV 225 (375)
T ss_dssp CEEEEECCCTTCEEEEEEEEEETTEECCCE--EEEEECCCC--CCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEEEEG
T ss_pred ceEEEeCCCCCCEEEEEEEEEeCCcccCCe--eeeeecCCC--CCceeEEEecccCEEEEEEcCCCCCCccEEEEEEEeC
Confidence 478888888777777777888887754222 222221111 1112112233456777777664222111 3444332
Q ss_pred CCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEeeEEEEEEeCCCCCCCCcceEEeecCCeEEEEe
Q psy11549 98 NSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTPCLYQVVLAGKPQPPQNCSVRNETTSSVHISC 177 (261)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~~~~~v~~~~~p~~p~~~~v~~~~~~~~~l~c 177 (261)
+.. ..............+.+.++.....+.|+..|.+..|..... .......|.+|.++.+.......+.|+|
T Consensus 226 ~~~----~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~---~~~~~t~p~~P~~l~~~~~~~~sv~l~W 298 (375)
T 3t1w_A 226 KNE----EDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL---RGRQKTGLDSPTGIDFSDITANSFTVHW 298 (375)
T ss_dssp GGT----TCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE---EEEEECCCCCCEEEEEESCCSSCEEEEE
T ss_pred CCC----CCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCce---eeEEecCCCCCCccEeeeccCCEEEEEE
Confidence 210 111122333444578999999999999999999977654432 2333457888888888877899999999
Q ss_pred ecCCCCCCCeEEEEEEEeCCc-cceeEEEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeee
Q psy11549 178 TPGYDGGLPQTFTLELYSASD-LNLLVNLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDF 247 (261)
Q Consensus 178 ~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~ 247 (261)
.++ .+.-..|.+.++.... ..............+.|.+ |.++..|.|+|.|.|..|.|++..-...
T Consensus 299 ~~p--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~~V~A~~~~G~s~p~s~~~~ 365 (375)
T 3t1w_A 299 IAP--RATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTN--LTPGTEYVVSIVALNGREESPLLIGQQS 365 (375)
T ss_dssp ECC--SSCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECS--CCTTCEEEEEEEEEETTEECCCEEEEEE
T ss_pred CCC--CcceeeEEEEEEECCCCCcceeEEcCCCccEEEECC--CCCCCEEEEEEEEECCCCCCCceeeeeE
Confidence 973 3444669998887654 2223334445568999999 9999999999999999999987765444
No 495
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=4.2e-10 Score=72.94 Aligned_cols=98 Identities=15% Similarity=0.093 Sum_probs=74.7
Q ss_pred CCCCCCCcceEEee--cCCeEEEEeecCCCCCCC-eEEEEEEEeCCccc-ee--EEEecCCCCcEEEcCCCCCCccEEEE
Q psy11549 155 GKPQPPQNCSVRNE--TTSSVHISCTPGYDGGLP-QTFTLELYSASDLN-LL--VNLTNLDTPAFTLEDLGLDGTVLMRV 228 (261)
Q Consensus 155 ~~p~~p~~~~v~~~--~~~~~~l~c~~~~~~~~p-~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~i~~~~l~~~~~Y~~ 228 (261)
.+|.+|.++.+... ....+.|+|.++...+.+ ..|.+.|+...... .. ..........++|.+ |.++..|.|
T Consensus 7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--L~p~t~Y~~ 84 (114)
T 2ede_A 7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMD--LNLDTMYYF 84 (114)
T ss_dssp CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECS--CCSSCEEEE
T ss_pred CCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcC--CCCCCEEEE
Confidence 45678888888876 678999999976544445 46999988744321 11 233345568899999 999999999
Q ss_pred EEEEEcCCCcCCceeeeeeeeccccc
Q psy11549 229 VISGVNAKGRSLPVIWDDFSMSGAHY 254 (261)
Q Consensus 229 ~~~a~N~~G~~~~s~~~~~~~~~~~~ 254 (261)
+|.|.|..|.+.+|..+.+++...++
T Consensus 85 ~V~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 85 RIQARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEEEeCCcCcCCcccEEEEecCCCC
Confidence 99999999999999999888765544
No 496
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.21 E-value=6e-10 Score=81.18 Aligned_cols=155 Identities=12% Similarity=0.177 Sum_probs=97.3
Q ss_pred EeeCCCcEEEEEEEeeCCC---CceeEEEEcCCccccccCCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCceEEee
Q psy11549 70 GASRSESVDIHCAVEADPP---ARSFKWKFNNSGETLDVGSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIGTQVTP 146 (261)
Q Consensus 70 ~~~~g~~~~l~C~~~~~~~---~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~~~~~~ 146 (261)
.+..|+.++|.|.+.+..+ +..++|++++.. + .+....|.+..+...++|.|+|.+.+..|....+
T Consensus 13 ~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~--I---------sGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tS 81 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQP--H---------ENNTATLTVADATSENAGSYKVTVQDTDTMTSVE 81 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEE--C---------SCCSSEEEESSCCGGGCEEEEEEEEETTTCCEEE
T ss_pred cccCCCCEEEEEEecCCCCCCCCceEEEEECCcc--c---------cCCcceEEeeeccccCCeEEEEEEEECCCCeeee
Confidence 3568999999999987654 558999998732 1 1123368999999999999999999877654433
Q ss_pred EEEEEEeCCCC----CCCCcceEEeecCCeEEEEeecCCCCCCC------eEEEEEEEeCCccceeEEEecCCCCcEEEc
Q psy11549 147 CLYQVVLAGKP----QPPQNCSVRNETTSSVHISCTPGYDGGLP------QTFTLELYSASDLNLLVNLTNLDTPAFTLE 216 (261)
Q Consensus 147 ~~~~v~~~~~p----~~p~~~~v~~~~~~~~~l~c~~~~~~~~p------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 216 (261)
..+.+.....+ ..|..+. ...+..+.|...+...+|.| ..|.|. ..+.. ......+++.
T Consensus 82 s~VtVT~~a~l~i~it~P~s~~--vssg~sVtL~aTVt~SGGtppA~~~~yTYQWy--Kngt~-------IsgAq~lT~s 150 (304)
T 3shs_A 82 SEVFLMEEAELIVNITEPQHFY--VSSQTDVELHATVKFSGGKTPADNYELHYSWS--KGEDV-------IDTTQDITIQ 150 (304)
T ss_dssp CCCEEECBCCEEEEESSCSEEE--ECSSCCEEEEEEEEETTSCCSSTTCCCEEEEE--ETTEE-------EESSSEEEEC
T ss_pred eeEEEeccCceeEEecCCCcee--ccCCCeEEEEEEEeccCCCCcccCCCceeEEe--eCCeE-------ccCcccccee
Confidence 23333322111 1232222 23467788877642234433 345553 33221 1233567777
Q ss_pred CCCCCCccEEEEEEEEEcCCCcCCceeeeeee
Q psy11549 217 DLGLDGTVLMRVVISGVNAKGRSLPVIWDDFS 248 (261)
Q Consensus 217 ~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~ 248 (261)
.....+.|.| .|.+.|..|....|.-..+.
T Consensus 151 S~TateaG~Y--tV~VTn~~~~c~~s~~~~i~ 180 (304)
T 3shs_A 151 EFTADKNGVY--TVKVWGESEDSAASASTKIM 180 (304)
T ss_dssp SCCGGGCEEE--EEEEESSSGGGCEEEEEEEE
T ss_pred eEEecCCeEE--EEEEEcCCCCcccccceEEE
Confidence 7778899999 88888998866666555443
No 497
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.21 E-value=7.9e-11 Score=87.37 Aligned_cols=172 Identities=12% Similarity=0.084 Sum_probs=90.3
Q ss_pred EEeeCCCcEEEEEEEeeCC-CCceeEEEEcCCccccc----------------cCCceEEe----CCceeEEEEecCCCC
Q psy11549 69 VGASRSESVDIHCAVEADP-PARSFKWKFNNSGETLD----------------VGSERFSS----GSRGSMLRYTPVTEL 127 (261)
Q Consensus 69 ~~~~~g~~~~l~C~~~~~~-~~~~~~W~~~~~~~~~~----------------~~~~~~~~----~~~~~~l~i~~~~~~ 127 (261)
+.+.+|++++|.|.+.+.. ....+.|++...+.... ....++.. ......|.|.++..+
T Consensus 9 v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (248)
T 3u2s_H 9 GVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVE 88 (248)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHH
Confidence 5678999999999997632 22379999754322110 00123332 133557999999999
Q ss_pred cCeEEEEEEEcCCc--------------------eEEeeEEEEEEeC-CCCCCCCcceE----EeecCCeEEEEeecCCC
Q psy11549 128 DYGTLSCAAQNAIG--------------------TQVTPCLYQVVLA-GKPQPPQNCSV----RNETTSSVHISCTPGYD 182 (261)
Q Consensus 128 d~g~y~C~~~~~~~--------------------~~~~~~~~~v~~~-~~p~~p~~~~v----~~~~~~~~~l~c~~~~~ 182 (261)
|+|.|.|.+.+..+ .........+.|. .++.+|..... ....+..++|.|.+ .
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~--~ 166 (248)
T 3u2s_H 89 DTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV--K 166 (248)
T ss_dssp GCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEEE--E
T ss_pred HCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEE--e
Confidence 99999999986410 1111111233333 33333322111 11348899999997 3
Q ss_pred CCCCeE-EEEEEEeCCccceeE-EEecCCC------CcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeee
Q psy11549 183 GGLPQT-FTLELYSASDLNLLV-NLTNLDT------PAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWD 245 (261)
Q Consensus 183 ~~~p~~-~~~~~~~~~~~~~~~-~~~~~~~------~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~ 245 (261)
+..|.. ...|++......... ....... ..++|......+ +.| +|.+.|..+.......+
T Consensus 167 ~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y--tC~v~h~~~~~~~~~~l 234 (248)
T 3u2s_H 167 DYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY--ICNVNHKPSNTKVDKKV 234 (248)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCC--EEEEEEGGGTEEEEEEC
T ss_pred eEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeE--EEEEEECCCCcceEEEE
Confidence 434422 223333332111111 0011111 245565544455 788 99999988755444333
No 498
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=5.1e-11 Score=78.56 Aligned_cols=114 Identities=18% Similarity=0.230 Sum_probs=80.9
Q ss_pred EEEEcCCceEEeeEEEEEE-eCCCCC-CCCcceEEeecCCeEEEEeecCCC--CCCC-eEEEEEEEeCCccceeEEEecC
Q psy11549 134 CAAQNAIGTQVTPCLYQVV-LAGKPQ-PPQNCSVRNETTSSVHISCTPGYD--GGLP-QTFTLELYSASDLNLLVNLTNL 208 (261)
Q Consensus 134 C~~~~~~~~~~~~~~~~v~-~~~~p~-~p~~~~v~~~~~~~~~l~c~~~~~--~~~p-~~~~~~~~~~~~~~~~~~~~~~ 208 (261)
+.|.|..|....+..+.+. ....|. +|.++.+.......+.|+|.++.. .+.+ ..|.+.|+....... ......
T Consensus 4 V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~-~~~~~~ 82 (124)
T 2ed9_A 4 GSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGE-METLEP 82 (124)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCC-EEEECS
T ss_pred EEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcc-eEEecC
Confidence 4455555544332222222 123454 788888888889999999998654 3444 459999887655432 223445
Q ss_pred CCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceeeeeeeec
Q psy11549 209 DTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIWDDFSMS 250 (261)
Q Consensus 209 ~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~~~~~~~ 250 (261)
....+.|.+ |.+++.|.|++.|.|..|.+.+|..+.+++.
T Consensus 83 ~~~~~~i~~--L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 122 (124)
T 2ed9_A 83 NNLWYLFTG--LEKGSQYSFQVSAMTVNGTGPPSNWYTAETP 122 (124)
T ss_dssp SCSEEEEEC--CCSSCEEEECEEEECSSCBCCCCCCEEEECC
T ss_pred CcCEEEEcC--CCCCCEEEEEEEEEcCCccCCCCCCEEEECC
Confidence 568899999 9999999999999999999999999888765
No 499
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=99.21 E-value=3.2e-09 Score=90.00 Aligned_cols=134 Identities=16% Similarity=0.112 Sum_probs=93.8
Q ss_pred eeEEEEecCCCCcCeEEEEEEEcCCce-E--EeeEEEEEEeC-CCCCCCCcceEEee--cCC---eEEEEeecCCCCCCC
Q psy11549 116 GSMLRYTPVTELDYGTLSCAAQNAIGT-Q--VTPCLYQVVLA-GKPQPPQNCSVRNE--TTS---SVHISCTPGYDGGLP 186 (261)
Q Consensus 116 ~~~l~i~~~~~~d~g~y~C~~~~~~~~-~--~~~~~~~v~~~-~~p~~p~~~~v~~~--~~~---~~~l~c~~~~~~~~p 186 (261)
...+.|.++.+...+.|++.|.|..|. . ..+..+..... .+|.+|.++.+... ..+ .+.|.|.++...+.+
T Consensus 222 ~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~ 301 (680)
T 1zlg_A 222 DERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIP 301 (680)
T ss_pred CCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCc
Confidence 346889999999999999999998772 2 22222322222 57889999988766 667 999999976545556
Q ss_pred eE-EEEEEEeC-C----ccceeE--EEecCCCCcEEEcCCCCCCccEEEEEEEEEcCCCcCCceee---eeeeecc
Q psy11549 187 QT-FTLELYSA-S----DLNLLV--NLTNLDTPAFTLEDLGLDGTVLMRVVISGVNAKGRSLPVIW---DDFSMSG 251 (261)
Q Consensus 187 ~~-~~~~~~~~-~----~~~~~~--~~~~~~~~~~~i~~~~l~~~~~Y~~~~~a~N~~G~~~~s~~---~~~~~~~ 251 (261)
+. |.+.|+.. . .....| .........++|.+ |.++..|.|+|.|.|..|.+..|.. +.+.+..
T Consensus 302 i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~--L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~ 375 (680)
T 1zlg_A 302 VHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEK--LQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTH 375 (680)
T ss_pred eeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCC--CCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCC
Confidence 54 88888722 1 111122 22233447899999 9999999999999999999887776 5555433
No 500
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.21 E-value=3.1e-11 Score=85.20 Aligned_cols=119 Identities=12% Similarity=0.005 Sum_probs=78.3
Q ss_pred eEEEccCCCCCCEeEEEEEEeCCCcceeeeEEEEEEeeceeecCceeEEEeeCCCcEEEEEEEeeCCCCce--eEEEEcC
Q psy11549 21 SLVLQKVSRQSAGTYKCSAINTKGEATSNQLKLRVKYAPICKSDRIVIVGASRSESVDIHCAVEADPPARS--FKWKFNN 98 (261)
Q Consensus 21 ~L~i~~~~~~D~G~Y~C~~~~~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~~~--~~W~~~~ 98 (261)
.+.|++++ +|.+.|.|.+... +...+..+.|.|...|...........+.+|+.++|.|.+.+..++.+ +.|++++
T Consensus 53 ~~~ls~vs-~d~~~~~C~~~c~-~~~~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~ 130 (196)
T 3bn3_B 53 ARQLVDIR-EPETQPVCFFRCA-RRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGA 130 (196)
T ss_dssp EEEEEEEC-SSEECCEEEEEET-TEEEEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETT
T ss_pred EEEEEEEc-cCCCceEEEEECC-CCceEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCC
Confidence 38999999 9989899997554 344577889999887765432221122679999999999998777434 8999976
Q ss_pred Ccccccc-CCceEEeCCceeEEEEecCCCCcCeEEEEEEEcCCc
Q psy11549 99 SGETLDV-GSERFSSGSRGSMLRYTPVTELDYGTLSCAAQNAIG 141 (261)
Q Consensus 99 ~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~g~y~C~~~~~~~ 141 (261)
....... ....-........+.+.....++...|+|.|.+..+
T Consensus 131 ~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 131 QELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp EEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred EEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 4211100 000000011234566766666666699999998765
Done!