Query psy11551
Match_columns 705
No_of_seqs 586 out of 4220
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 21:25:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11551.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11551hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 5.2E-43 1.8E-47 356.1 11.7 240 218-470 8-253 (256)
2 3i3n_A Kelch-like protein 11; 100.0 7.3E-42 2.5E-46 352.0 17.7 242 219-470 10-260 (279)
3 3htm_A Speckle-type POZ protei 100.0 9.3E-29 3.2E-33 235.3 16.0 159 219-381 12-171 (172)
4 3i3n_A Kelch-like protein 11; 99.9 5.4E-27 1.8E-31 241.1 10.7 163 509-680 96-260 (279)
5 3hve_A Gigaxonin; ubiquitin, c 99.9 1.1E-27 3.9E-32 242.9 1.1 164 509-681 88-254 (256)
6 3hqi_A Speckle-type POZ protei 99.9 1.9E-25 6.6E-30 233.5 17.0 155 223-381 156-311 (312)
7 4eoz_A Speckle-type POZ protei 99.9 9.4E-26 3.2E-30 208.1 8.4 138 223-364 7-145 (145)
8 2if5_A Zinc finger and BTB dom 99.9 1.5E-23 5.1E-28 186.4 13.6 116 219-338 3-119 (120)
9 2z8h_A Transcription regulator 99.9 1.4E-23 4.9E-28 191.2 11.8 125 217-346 12-137 (138)
10 1r29_A B-cell lymphoma 6 prote 99.9 4.4E-23 1.5E-27 185.3 14.4 120 218-341 6-126 (127)
11 3b84_A Zinc finger and BTB dom 99.9 2.4E-23 8.3E-28 184.5 7.9 114 221-341 4-117 (119)
12 2vkp_A BTB/POZ domain-containi 99.9 1.1E-22 3.6E-27 177.7 11.5 108 235-342 2-109 (109)
13 2ppi_A Gigaxonin; BTB domain, 99.9 8.2E-23 2.8E-27 187.2 11.0 117 218-338 24-143 (144)
14 1buo_A POZ domain, protein (pr 99.9 2.3E-22 7.8E-27 178.8 13.1 116 218-341 5-120 (121)
15 2yy9_A Zinc finger and BTB dom 99.9 7E-23 2.4E-27 185.7 8.9 119 221-346 5-123 (135)
16 2vpk_A Myoneurin; transcriptio 99.9 3.7E-22 1.3E-26 176.2 11.6 110 223-339 4-115 (116)
17 3ohu_A Transcription regulator 99.9 2.7E-23 9.1E-28 186.2 4.2 116 218-338 9-125 (125)
18 3htm_A Speckle-type POZ protei 99.9 1.3E-21 4.4E-26 185.9 12.5 125 1-134 39-164 (172)
19 2ihc_A Transcription regulator 99.9 1.4E-22 4.6E-27 181.1 4.7 116 219-339 7-123 (124)
20 3ga1_A Nucleus accumbens-assoc 99.9 3.5E-22 1.2E-26 179.8 7.4 117 219-342 11-128 (129)
21 2q81_A MIZ-1 protein; BTB/POZ 99.9 4E-22 1.4E-26 176.6 7.5 112 220-339 6-117 (119)
22 3m5b_A Zinc finger and BTB dom 99.8 5.4E-21 1.8E-25 168.7 8.4 103 224-340 15-117 (119)
23 3fkc_A Transcriptional regulat 99.8 3.4E-20 1.2E-24 163.1 12.1 107 218-332 8-115 (116)
24 3hqi_A Speckle-type POZ protei 99.8 3.3E-20 1.1E-24 193.7 12.2 124 1-133 179-303 (312)
25 4eoz_A Speckle-type POZ protei 99.8 1E-20 3.6E-25 174.1 5.6 115 1-124 30-145 (145)
26 2vkp_A BTB/POZ domain-containi 99.8 1.6E-18 5.6E-23 150.9 9.0 93 1-102 13-109 (109)
27 2eqx_A Kelch repeat and BTB do 99.7 4E-19 1.4E-23 152.7 4.4 94 549-654 5-99 (105)
28 1r29_A B-cell lymphoma 6 prote 99.7 6.4E-18 2.2E-22 151.4 9.5 92 1-101 34-126 (127)
29 2if5_A Zinc finger and BTB dom 99.7 7.2E-18 2.5E-22 149.5 9.0 89 1-98 30-119 (120)
30 1buo_A POZ domain, protein (pr 99.7 9.8E-18 3.3E-22 148.8 9.0 88 1-101 33-120 (121)
31 3b84_A Zinc finger and BTB dom 99.7 5.3E-18 1.8E-22 150.0 6.4 88 1-100 29-116 (119)
32 2z8h_A Transcription regulator 99.7 6.4E-18 2.2E-22 153.7 6.5 96 1-106 41-137 (138)
33 2vpk_A Myoneurin; transcriptio 99.7 1.6E-17 5.3E-22 146.4 8.6 87 1-99 27-115 (116)
34 2ppi_A Gigaxonin; BTB domain, 99.7 1E-17 3.6E-22 153.2 6.9 89 1-98 52-143 (144)
35 2yy9_A Zinc finger and BTB dom 99.7 1E-17 3.6E-22 151.5 5.2 93 1-105 30-122 (135)
36 2q81_A MIZ-1 protein; BTB/POZ 99.7 1.9E-17 6.4E-22 146.4 5.7 86 1-99 32-117 (119)
37 3ga1_A Nucleus accumbens-assoc 99.6 2.9E-17 9.8E-22 147.5 3.1 89 1-101 38-127 (129)
38 2eqx_A Kelch repeat and BTB do 99.6 7.1E-17 2.4E-21 138.6 5.4 94 339-444 5-99 (105)
39 3ohu_A Transcription regulator 99.6 1.6E-17 5.4E-22 148.4 1.3 88 1-98 37-125 (125)
40 2ihc_A Transcription regulator 99.6 2E-17 6.9E-22 147.4 0.9 89 1-99 34-123 (124)
41 3m5b_A Zinc finger and BTB dom 99.6 2.8E-16 9.6E-21 138.4 5.7 83 1-100 35-117 (119)
42 3fkc_A Transcriptional regulat 99.6 1.3E-15 4.3E-20 133.8 7.6 79 1-92 36-115 (116)
43 2ast_A S-phase kinase-associat 99.4 7.3E-13 2.5E-17 122.6 11.1 112 244-359 3-146 (159)
44 4ajy_C Transcription elongatio 99.2 4.9E-11 1.7E-15 100.3 9.5 80 244-327 4-97 (97)
45 2ast_A S-phase kinase-associat 99.1 1.5E-10 5E-15 107.1 9.6 107 3-118 8-145 (159)
46 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 6.1E-10 2.1E-14 100.5 10.1 99 244-349 4-128 (141)
47 2p1m_A SKP1-like protein 1A; F 98.9 2.6E-10 8.8E-15 105.3 3.0 109 244-358 6-144 (160)
48 4ajy_C Transcription elongatio 98.9 4.4E-09 1.5E-13 88.3 7.8 76 3-86 9-96 (97)
49 1fs1_B SKP1, cyclin A/CDK2-ass 98.7 1.7E-08 5.9E-13 90.9 6.9 91 3-106 9-125 (141)
50 2p1m_A SKP1-like protein 1A; F 98.6 8.5E-09 2.9E-13 95.1 3.1 102 3-116 11-142 (160)
51 1hv2_A Elongin C, ELC1; protei 98.5 4.4E-07 1.5E-11 76.0 8.4 80 243-327 5-99 (99)
52 2fnj_C Transcription elongatio 98.4 5.9E-07 2E-11 74.8 7.4 80 244-327 3-96 (96)
53 3v7d_A Suppressor of kinetocho 98.4 2.1E-06 7.2E-11 79.5 11.6 96 243-342 8-133 (169)
54 3drz_A BTB/POZ domain-containi 98.0 2.5E-05 8.5E-10 66.4 9.5 93 243-340 7-106 (107)
55 1vcb_B Protein (elongin C); tu 97.9 1.8E-05 6.1E-10 67.6 7.5 81 243-327 18-112 (112)
56 3drz_A BTB/POZ domain-containi 97.9 3.3E-05 1.1E-09 65.6 8.0 95 1-100 10-106 (107)
57 1hv2_A Elongin C, ELC1; protei 97.9 2.4E-05 8.3E-10 65.4 6.6 75 3-87 11-99 (99)
58 3v7d_A Suppressor of kinetocho 97.8 9.9E-05 3.4E-09 68.2 11.2 98 3-106 14-140 (169)
59 2fnj_C Transcription elongatio 97.8 2.6E-05 9E-10 64.8 5.8 77 3-87 8-96 (96)
60 1vcb_B Protein (elongin C); tu 97.0 0.00092 3.1E-08 57.0 6.0 77 3-87 24-112 (112)
61 3drx_A BTB/POZ domain-containi 96.8 0.0022 7.4E-08 60.1 7.3 92 243-339 13-111 (202)
62 3drx_A BTB/POZ domain-containi 96.4 0.0034 1.2E-07 58.8 5.8 95 1-100 16-112 (202)
63 1s1g_A Potassium voltage-gated 94.4 0.034 1.2E-06 48.1 4.2 85 243-335 14-105 (124)
64 3kvt_A Potassium channel prote 94.3 0.026 9.1E-07 48.1 3.5 83 243-330 6-92 (115)
65 3kvt_A Potassium channel prote 94.1 0.022 7.4E-07 48.6 2.4 82 1-90 9-92 (115)
66 1s1g_A Potassium voltage-gated 93.3 0.06 2E-06 46.5 3.7 86 1-94 17-104 (124)
67 1t1d_A Protein (potassium chan 92.6 0.057 1.9E-06 44.7 2.6 83 1-91 5-90 (100)
68 1nn7_A Potassium channel KV4.2 91.7 0.044 1.5E-06 45.9 0.9 79 244-330 2-86 (105)
69 1t1d_A Protein (potassium chan 91.7 0.11 3.7E-06 43.0 3.2 83 244-331 3-90 (100)
70 2nz0_B Potassium voltage-gated 91.7 0.15 5.1E-06 45.0 4.3 81 242-330 35-121 (140)
71 1nn7_A Potassium channel KV4.2 90.0 0.066 2.3E-06 44.8 0.4 82 1-90 4-86 (105)
72 2nz0_B Potassium voltage-gated 89.8 0.23 7.8E-06 43.8 3.7 82 1-90 39-121 (140)
73 2r9r_B Paddle chimera voltage 50.6 9.9 0.00034 41.3 3.8 82 1-90 56-140 (514)
74 2r9r_B Paddle chimera voltage 49.1 11 0.00039 40.8 4.0 81 243-331 53-141 (514)
75 2plx_B Peptide inhibitor; heli 49.1 16 0.00055 20.5 2.6 23 558-580 2-24 (26)
76 3no8_A BTB/POZ domain-containi 41.5 5.6 0.00019 36.1 0.0 38 485-525 3-43 (176)
77 2cmy_B Beta trypsin, veronica 30.7 25 0.00085 21.0 1.6 26 557-582 6-31 (34)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=5.2e-43 Score=356.08 Aligned_cols=240 Identities=16% Similarity=0.269 Sum_probs=207.9
Q ss_pred CCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCC--CCc-ceEEcCCCCHH
Q psy11551 218 DPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLA--ENK-EEIEVPDVEPS 294 (705)
Q Consensus 218 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~--e~~-~~i~l~~v~~~ 294 (705)
...+..+...+.++++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++. ++. .+|.+++++++
T Consensus 8 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~ 83 (256)
T 3hve_A 8 AVSDPQHAARLLRALSSFREESRFCDAHLVLDG----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVM 83 (256)
T ss_dssp --CCTTTHHHHHHHHHTCCC--CCCCEEEEETT----EEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHH
T ss_pred ccCChHHHHHHHHHHHHHHhcCCCcceEEEECC----EEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHH
Confidence 345567899999999999999999999999998 99999999999999999999999887 455 89999999999
Q ss_pred HHHHHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhhHHHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy11551 295 AFLTLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQA 374 (705)
Q Consensus 295 ~f~~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~ 374 (705)
+|+.+++|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.++++||+.++.+|..|++..|.+.|.+||.+||
T Consensus 84 ~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 163 (256)
T 3hve_A 84 VMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHF 163 (256)
T ss_dssp HHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcccccCCHHHHHhccccCCccc-ChHHHHHHHHHHHHhhccccCCCCChhhhHHhHhhhhcccccCCCCHHHHH
Q psy11551 375 EMALKSEGFVDIDMSTLESVFARETLNC-KEMHLFEAALNWANAECVRRDLEPTAHNKRLVLGNALYLVRIPTMSLGEFA 453 (705)
Q Consensus 375 ~~v~~~~~f~~L~~~~l~~ll~~~~l~v-~E~~vf~av~~W~~~~~~~~~~~~~~~~r~~~~~~ll~~vRf~~m~~~~l~ 453 (705)
.++..+++|.+|+.+.+..+|++|+|+| +|.+||+++++|++++ +++|.++++.+|++|||++|++++|.
T Consensus 164 ~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---------~~~R~~~~~~ll~~VRf~~l~~~~l~ 234 (256)
T 3hve_A 164 RDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---------TEIRKVHMKDVMSALWVSGLDSSYLR 234 (256)
T ss_dssp HHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----------CCSTTTHHHHHHHHHHHTTCC-CHH
T ss_pred HHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---------HHHHHHHHHHHHHhCCCCCCCHHHHH
Confidence 9999999999999999999999999999 7999999999999986 67889999999999999999999999
Q ss_pred HhhhhcCCCCch--HHHHH
Q psy11551 454 NKAAQLGILTLQ--ETIDI 470 (705)
Q Consensus 454 ~~v~~~~~~~~~--~~~~~ 470 (705)
+.+.++++++.. +|.++
T Consensus 235 ~~v~~~~l~~~~~~~c~~l 253 (256)
T 3hve_A 235 EQMLNEPLVREIVKECSNI 253 (256)
T ss_dssp HHHHTSTTHHHHHCC----
T ss_pred HHHhcChHHHhhHHHHHHH
Confidence 999999999876 45543
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=7.3e-42 Score=352.03 Aligned_cols=242 Identities=17% Similarity=0.342 Sum_probs=220.4
Q ss_pred CCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCc-ceEEcC------CC
Q psy11551 219 PNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENK-EEIEVP------DV 291 (705)
Q Consensus 219 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~-~~i~l~------~v 291 (705)
+.+..+...+...++.++.++.+|||+|+++++ +|+.|+|||.||+++|+||++||.++|.|+. .+|.++ ++
T Consensus 10 ~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v 88 (279)
T 3i3n_A 10 FECSSHCSELSWRQNEQRRQGLFCDITLCFGGA-GGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP 88 (279)
T ss_dssp EECTTHHHHHHHHHHHHHHHTTTCCEEEECC-----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS
T ss_pred cCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCC-CCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC
Confidence 445578999999999999999999999999821 0289999999999999999999999999988 899998 89
Q ss_pred CHHHHHHHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhhHHHHHHHHhhcCChHHHHHHHHHHH
Q psy11551 292 EPSAFLTLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVID 371 (705)
Q Consensus 292 ~~~~f~~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~ 371 (705)
++++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.++++||+.++.+|..|++..|.+.|.+||.
T Consensus 89 ~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 168 (279)
T 3i3n_A 89 EPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIR 168 (279)
T ss_dssp CHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcccccCCHHHHHhccccCCccc-ChHHHHHHHHHHHHhhccccCCCCChhhhHHhHhhhhcccccCCCCHH
Q psy11551 372 AQAEMALKSEGFVDIDMSTLESVFARETLNC-KEMHLFEAALNWANAECVRRDLEPTAHNKRLVLGNALYLVRIPTMSLG 450 (705)
Q Consensus 372 ~~~~~v~~~~~f~~L~~~~l~~ll~~~~l~v-~E~~vf~av~~W~~~~~~~~~~~~~~~~r~~~~~~ll~~vRf~~m~~~ 450 (705)
+||.++..+++|.+|+.+.+..+|++|.|++ +|.+||+++++|++++ +++|.+++++||++|||++|+++
T Consensus 169 ~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---------~~~r~~~~~~ll~~VRf~l~~~~ 239 (279)
T 3i3n_A 169 RNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---------AEERERYFEELFKLLRLSQMKPT 239 (279)
T ss_dssp HTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---------HHHHTTTHHHHHTTSCGGGSCHH
T ss_pred HHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---------HHHHHHHHHHHHHhcCCCCCCHH
Confidence 9999999999999999999999999999999 7999999999999987 78899999999999999999999
Q ss_pred HHHHhhhhcCCCCch-HHHHH
Q psy11551 451 EFANKAAQLGILTLQ-ETIDI 470 (705)
Q Consensus 451 ~l~~~v~~~~~~~~~-~~~~~ 470 (705)
+|.+.+.++++++.+ +|.+.
T Consensus 240 ~L~~~v~~~~l~~~~~~c~~~ 260 (279)
T 3i3n_A 240 YLTRHVKPERLVANNEVCVKL 260 (279)
T ss_dssp HHHHTTTTSHHHHTCHHHHHH
T ss_pred HHHHHhhccchhcCCHHHHHH
Confidence 999999999988755 44443
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.96 E-value=9.3e-29 Score=235.35 Aligned_cols=159 Identities=25% Similarity=0.364 Sum_probs=146.3
Q ss_pred CCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCc-ceEEcCCCCHHHHH
Q psy11551 219 PNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENK-EEIEVPDVEPSAFL 297 (705)
Q Consensus 219 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~-~~i~l~~v~~~~f~ 297 (705)
..+..+.+.+..++..+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.|+. .+|.++++++++|+
T Consensus 12 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~ 87 (172)
T 3htm_A 12 NMVKVPECRLADELGGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFK 87 (172)
T ss_dssp CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhCCCCcceEEEECC----EEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHH
Confidence 34455677899999999999999999999998 99999999999999999999999999888 99999999999999
Q ss_pred HHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Q psy11551 298 TLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQAEMA 377 (705)
Q Consensus 298 ~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~v 377 (705)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.++++||+.++.+|..|++..|.+.|.+||.+||.++
T Consensus 88 ~~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v 167 (172)
T 3htm_A 88 EMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDV 167 (172)
T ss_dssp HHHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC---
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCc
Q psy11551 378 LKSE 381 (705)
Q Consensus 378 ~~~~ 381 (705)
++++
T Consensus 168 ~~s~ 171 (172)
T 3htm_A 168 LETS 171 (172)
T ss_dssp ----
T ss_pred HcCC
Confidence 8765
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.94 E-value=5.4e-27 Score=241.06 Aligned_cols=163 Identities=16% Similarity=0.334 Sum_probs=153.8
Q ss_pred CCCCccccceeeccchhhhHHHhhccCCchhHHHHHHHHHHHhcChhhHHHHHHhhhcCCCchHHHHHHHHHHHHHHHhh
Q psy11551 509 FPRYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQAEMAL 588 (705)
Q Consensus 509 ~~~y~y~~~~~~~~~~~~~~l~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~c~~~i~~n~~~v~ 588 (705)
.++|+|++.+.++.+++.+++.+|++|+++.|++.|.+||.+.++++||+.++..|..|+.+.|.+.|.+||.+||.+++
T Consensus 96 ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 175 (279)
T 3i3n_A 96 VIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVI 175 (279)
T ss_dssp HHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHT
T ss_pred HHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCccccCHHHHHHHhhcCCcCc-chHHHHHHHHHHHHhhccccCCCCchhhHHHHHhhhhhcccCCCCChHHHHHHHh
Q psy11551 589 KSEGFVDIDMSTLESVFARETLNC-KEMHLFEAALNWANAECVRRDLEPTAHNKRLVLGNALYLVRIPTMSLGEFANKAA 667 (705)
Q Consensus 589 ~~~~F~~L~~~~l~~il~~d~L~v-~E~~vf~av~~W~~~~~~~~~~~~~~~~~~~~l~~ll~~iRfplm~~~~l~~~v~ 667 (705)
++++|++|+.+.|..||++|+|+| +|.+||+||++|++|+ .++|+.+++++|++||||+|++++|.+.|+
T Consensus 176 ~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~---------~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~ 246 (279)
T 3i3n_A 176 QDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN---------AEERERYFEELFKLLRLSQMKPTYLTRHVK 246 (279)
T ss_dssp TSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT---------HHHHTTTHHHHHTTSCGGGSCHHHHHHTTT
T ss_pred cCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC---------HHHHHHHHHHHHHhcCCCCCCHHHHHHHhh
Confidence 999999999999999999999999 9999999999999987 577888999999999999999999999999
Q ss_pred HhCCCChH-HHHHH
Q psy11551 668 QLGILTLQ-ETIDI 680 (705)
Q Consensus 668 ~~~l~~~~-~~~~~ 680 (705)
+.+++..+ ++.++
T Consensus 247 ~~~l~~~~~~c~~~ 260 (279)
T 3i3n_A 247 PERLVANNEVCVKL 260 (279)
T ss_dssp TSHHHHTCHHHHHH
T ss_pred ccchhcCCHHHHHH
Confidence 99888643 44433
No 5
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.93 E-value=1.1e-27 Score=242.94 Aligned_cols=164 Identities=16% Similarity=0.292 Sum_probs=143.8
Q ss_pred CCCCccccceeeccchhhhHHHhhccCCchhHHHHHHHHHHHhcChhhHHHHHHhhhcCCCchHHHHHHHHHHHHHHHhh
Q psy11551 509 FPRYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQAEMAL 588 (705)
Q Consensus 509 ~~~y~y~~~~~~~~~~~~~~l~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~c~~~i~~n~~~v~ 588 (705)
.++|+|++.+.++.+++.+++.+|++|+++.|++.|.+||.+.++++||+.++.+|..|+.++|.+.|.+||.+||.++.
T Consensus 88 ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 167 (256)
T 3hve_A 88 ILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVS 167 (256)
T ss_dssp HHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCccccCHHHHHHHhhcCCcCc-chHHHHHHHHHHHHhhccccCCCCchhhHHHHHhhhhhcccCCCCChHHHHHHHh
Q psy11551 589 KSEGFVDIDMSTLESVFARETLNC-KEMHLFEAALNWANAECVRRDLEPTAHNKRLVLGNALYLVRIPTMSLGEFANKAA 667 (705)
Q Consensus 589 ~~~~F~~L~~~~l~~il~~d~L~v-~E~~vf~av~~W~~~~~~~~~~~~~~~~~~~~l~~ll~~iRfplm~~~~l~~~v~ 667 (705)
++++|.+|+.+.|..||++|+|+| +|.+||+||++|++|+ .++|+.++++++++||||+|++++|.+.|+
T Consensus 168 ~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~---------~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~ 238 (256)
T 3hve_A 168 STEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD---------TEIRKVHMKDVMSALWVSGLDSSYLREQML 238 (256)
T ss_dssp TCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-----------CCSTTTHHHHHHHHHHHTTCC-CHHHHHH
T ss_pred CCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC---------HHHHHHHHHHHHHhCCCCCCCHHHHHHHHh
Confidence 999999999999999999999999 9999999999999987 466778999999999999999999999999
Q ss_pred HhCCCChH--HHHHHH
Q psy11551 668 QLGILTLQ--ETIDIF 681 (705)
Q Consensus 668 ~~~l~~~~--~~~~~~ 681 (705)
+.+++... ++.+++
T Consensus 239 ~~~l~~~~~~~c~~ll 254 (256)
T 3hve_A 239 NEPLVREIVKECSNIP 254 (256)
T ss_dssp TSTTHHHHHCC-----
T ss_pred cChHHHhhHHHHHHHh
Confidence 99999876 566654
No 6
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.93 E-value=1.9e-25 Score=233.50 Aligned_cols=155 Identities=26% Similarity=0.382 Sum_probs=138.8
Q ss_pred CChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCc-ceEEcCCCCHHHHHHHHH
Q psy11551 223 ASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENK-EEIEVPDVEPSAFLTLLK 301 (705)
Q Consensus 223 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~-~~i~l~~v~~~~f~~lL~ 301 (705)
.+.+.+.+++..+++++.+|||+|.++| ++|+|||.|||++|+||++||.+++.|+. .+|.++++++++|+.+|+
T Consensus 156 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~ 231 (312)
T 3hqi_A 156 VPECRLADELGGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 231 (312)
T ss_dssp CCCCCHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhCCCCCceEEEECC----EEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHH
Confidence 3456799999999999999999999998 99999999999999999999999999988 999999999999999999
Q ss_pred hHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhCCc
Q psy11551 302 YLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQAEMALKSE 381 (705)
Q Consensus 302 yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~v~~~~ 381 (705)
|+|||.+.++.+++.+++.+|++|+++.|+..|+++|.+.++.+||+.++.+|..|++..|++.|++||..|+.++++++
T Consensus 232 ~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 311 (312)
T 3hqi_A 232 FIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETS 311 (312)
T ss_dssp HHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988765
No 7
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.92 E-value=9.4e-26 Score=208.08 Aligned_cols=138 Identities=27% Similarity=0.396 Sum_probs=106.6
Q ss_pred CChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCc-ceEEcCCCCHHHHHHHHH
Q psy11551 223 ASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENK-EEIEVPDVEPSAFLTLLK 301 (705)
Q Consensus 223 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~-~~i~l~~v~~~~f~~lL~ 301 (705)
.+.+++..++..+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.++. ..|.++++++++|+.+|+
T Consensus 7 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~ 82 (145)
T 4eoz_A 7 VPECRLADELGGLWENSRFTDCCLCVAG----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 82 (145)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCcceEEEECC----EEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHH
Confidence 3567899999999999999999999998 99999999999999999999999998877 899999999999999999
Q ss_pred hHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhhHHHHHHHHhhcCChHHHH
Q psy11551 302 YLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQ 364 (705)
Q Consensus 302 yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~ 364 (705)
|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.++++||+.++.+|..|++.+|++
T Consensus 83 ~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 83 FIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred hhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999988763
No 8
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.90 E-value=1.5e-23 Score=186.43 Aligned_cols=116 Identities=21% Similarity=0.348 Sum_probs=106.9
Q ss_pred CCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCc-ceEEcCCCCHHHHH
Q psy11551 219 PNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENK-EEIEVPDVEPSAFL 297 (705)
Q Consensus 219 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~-~~i~l~~v~~~~f~ 297 (705)
..|+.+.+.+.+.+.++++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.|+. ..|.++++++++|+
T Consensus 3 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~ 78 (120)
T 2if5_A 3 IPFPDHSSDILSGLNEQRTQGLLCDVVILVEG----REFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALT 78 (120)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHH
T ss_pred cCccchHHHHHHHHHHHHhcCCCCCeEEEECC----EEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHH
Confidence 34667899999999999999999999999998 99999999999999999999999999887 89999999999999
Q ss_pred HHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHH
Q psy11551 298 TLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYL 338 (705)
Q Consensus 298 ~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l 338 (705)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|
T Consensus 79 ~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 79 ALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.90 E-value=1.4e-23 Score=191.19 Aligned_cols=125 Identities=20% Similarity=0.280 Sum_probs=117.4
Q ss_pred CCCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcC-CCCHHH
Q psy11551 217 GDPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVP-DVEPSA 295 (705)
Q Consensus 217 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~-~v~~~~ 295 (705)
....+..+...+.+.+..+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.++ ..|.++ ++++++
T Consensus 12 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~~~e~-~~i~l~~~v~~~~ 86 (138)
T 2z8h_A 12 FAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEG----QRFRAHRSVLAACSSYFHSRIVGQTDAE-LTVTLPEEVTVKG 86 (138)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTTCCCTT-EEEECCTTSCHHH
T ss_pred eEecCCchHHHHHHHHHHHHhhCCCcCeEEEECC----EEEechHHHHHHcCHHHHHHHhcCCCCC-ceEEeCCCCCHHH
Confidence 3566778999999999999999999999999998 9999999999999999999999988764 578885 999999
Q ss_pred HHHHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhh
Q psy11551 296 FLTLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKN 346 (705)
Q Consensus 296 f~~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n 346 (705)
|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+.++.+|
T Consensus 87 ~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 87 FEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999999999998877
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.89 E-value=4.4e-23 Score=185.31 Aligned_cols=120 Identities=24% Similarity=0.474 Sum_probs=113.5
Q ss_pred CCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEc-CCCCHHHH
Q psy11551 218 DPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEV-PDVEPSAF 296 (705)
Q Consensus 218 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l-~~v~~~~f 296 (705)
...+..+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.|....|.+ +++++++|
T Consensus 6 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f 81 (127)
T 1r29_A 6 QIQFTRHASDVLLNLNRLRSRDILTDVVIVVSR----EQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGF 81 (127)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHH
T ss_pred cccchhHHHHHHHHHHHHHhcCCCCCEEEEECC----EEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHH
Confidence 456678899999999999999999999999998 9999999999999999999999999984489999 99999999
Q ss_pred HHHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhc
Q psy11551 297 LTLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETS 341 (705)
Q Consensus 297 ~~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~ 341 (705)
+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.++
T Consensus 82 ~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 82 NILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999753
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.88 E-value=2.4e-23 Score=184.49 Aligned_cols=114 Identities=20% Similarity=0.283 Sum_probs=105.6
Q ss_pred CCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHHH
Q psy11551 221 WQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTLL 300 (705)
Q Consensus 221 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~lL 300 (705)
|..+.+.+.+.++.+++++.+|||+|.++| ++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|
T Consensus 4 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~~~~f~~ll 76 (119)
T 3b84_A 4 FVQHSVRVLQELNKQREKGQYCDATLDVGG----LVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGFAEIFGLLL 76 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGGHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCCCcceEEEECC----EEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCCHHHHHHHH
Confidence 456788999999999999999999999998 9999999999999999999999876 468999999999999999
Q ss_pred HhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhc
Q psy11551 301 KYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETS 341 (705)
Q Consensus 301 ~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~ 341 (705)
+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+.
T Consensus 77 ~~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 77 DFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred HHHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999998753
No 12
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=177.65 Aligned_cols=108 Identities=79% Similarity=1.228 Sum_probs=95.7
Q ss_pred HHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHHHHhHccCCccCChhh
Q psy11551 235 MFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADT 314 (705)
Q Consensus 235 l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~~ 314 (705)
+++++.+|||+|.++++++++.|+|||.||+++|+||++||.++|.|+..+|.++++++++|+.+|+|+|||++.++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~ 81 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEADT 81 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTTT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHHH
Confidence 57889999999999985444899999999999999999999999988778899999999999999999999999999999
Q ss_pred HHHHHHHHhhcChhHHHHHHHHHHHhcC
Q psy11551 315 VLATLYVAKKYIVPHLARACVTYLETSL 342 (705)
Q Consensus 315 v~~ll~~A~~~~l~~L~~~c~~~l~~~l 342 (705)
+.+++.+|++|+++.|++.|+++|.+++
T Consensus 82 ~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 82 VLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 9999999999999999999999998754
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.88 E-value=8.2e-23 Score=187.21 Aligned_cols=117 Identities=17% Similarity=0.306 Sum_probs=106.6
Q ss_pred CCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCC--Cc-ceEEcCCCCHH
Q psy11551 218 DPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAE--NK-EEIEVPDVEPS 294 (705)
Q Consensus 218 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e--~~-~~i~l~~v~~~ 294 (705)
...++.+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.+ +. ..|.+++++++
T Consensus 24 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~ 99 (144)
T 2ppi_A 24 AVSDPQHAARLLRALSSFREESRFCDAHLVLDG----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVM 99 (144)
T ss_dssp CCCCTTHHHHHHHHHHHTTC--CCCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHH
T ss_pred eecCcchHHHHHHHHHHHHhcCCCcceEEEECC----EEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHH
Confidence 455667889999999999999999999999998 999999999999999999999998876 34 88999999999
Q ss_pred HHHHHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHH
Q psy11551 295 AFLTLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYL 338 (705)
Q Consensus 295 ~f~~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l 338 (705)
+|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||
T Consensus 100 ~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 100 VMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999886
No 14
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.88 E-value=2.3e-22 Score=178.84 Aligned_cols=116 Identities=25% Similarity=0.347 Sum_probs=108.6
Q ss_pred CCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHH
Q psy11551 218 DPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFL 297 (705)
Q Consensus 218 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~ 297 (705)
...++.+.+.+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.++ ..+|.++++++++|+
T Consensus 5 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~ 76 (121)
T 1buo_A 5 QLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDS----QEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLSPKTFQ 76 (121)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESS----CEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHH
T ss_pred eccCcchHHHHHHHHHHHHhcCCCCCEEEEECC----EEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCCHHHHH
Confidence 345667899999999999999999999999998 999999999999999999999864 368999999999999
Q ss_pred HHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhc
Q psy11551 298 TLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETS 341 (705)
Q Consensus 298 ~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~ 341 (705)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 77 ~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 77 QILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999764
No 15
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.88 E-value=7e-23 Score=185.71 Aligned_cols=119 Identities=20% Similarity=0.257 Sum_probs=103.2
Q ss_pred CCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHHH
Q psy11551 221 WQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTLL 300 (705)
Q Consensus 221 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~lL 300 (705)
+..+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++ ..+|.++++++++|+.+|
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~~~~f~~lL 77 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQREKGQYCDATLDVGG----LVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGFAEIFGLLL 77 (135)
T ss_dssp --CHHHHHHHHHHHHHHTTTTCCEEEEETT----EEEEECHHHHHHHCHHHHHTCC-------CCEEECGGGHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCcceEEEECC----EEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCCHHHHHHHH
Confidence 446889999999999999999999999998 9999999999999999999999876 467999999999999999
Q ss_pred HhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhh
Q psy11551 301 KYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKN 346 (705)
Q Consensus 301 ~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n 346 (705)
+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+.+...+
T Consensus 78 ~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 78 DFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp HHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999999999999988775443
No 16
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=3.7e-22 Score=176.15 Aligned_cols=110 Identities=22% Similarity=0.324 Sum_probs=103.0
Q ss_pred CChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcC--CCCHHHHHHHH
Q psy11551 223 ASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVP--DVEPSAFLTLL 300 (705)
Q Consensus 223 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~--~v~~~~f~~lL 300 (705)
.+...+.++++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.++ +...|.++ ++++++|+.+|
T Consensus 4 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~~~~f~~ll 76 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGFLCDCTIVIGE----FQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVKADGFQKLL 76 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEECC----EEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCCHHHHHHHH
Confidence 4678899999999999999999999998 999999999999999999999987 23567777 99999999999
Q ss_pred HhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHH
Q psy11551 301 KYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLE 339 (705)
Q Consensus 301 ~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~ 339 (705)
+|+|||++.++.+++.+++.+|++|+++.|++.|+++|.
T Consensus 77 ~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 77 EFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999985
No 17
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.87 E-value=2.7e-23 Score=186.17 Aligned_cols=116 Identities=19% Similarity=0.334 Sum_probs=108.0
Q ss_pred CCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCC-CCHHHH
Q psy11551 218 DPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPD-VEPSAF 296 (705)
Q Consensus 218 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~-v~~~~f 296 (705)
...+..+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|
T Consensus 9 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~~~~f 83 (125)
T 3ohu_A 9 VYESTVHCTNILLGLNDQRKKDILCDVTLIVER----KEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVTARGF 83 (125)
T ss_dssp EEECSSHHHHHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCCHHHH
T ss_pred eeecHHHHHHHHHHHHHHHhcCCccceEEEECC----EEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCCHHHH
Confidence 345567899999999999999999999999998 999999999999999999999998876 47899998 999999
Q ss_pred HHHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHH
Q psy11551 297 LTLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYL 338 (705)
Q Consensus 297 ~~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l 338 (705)
+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||
T Consensus 84 ~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 84 GPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 999999999999999999999999999999999999998763
No 18
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=185.85 Aligned_cols=125 Identities=28% Similarity=0.395 Sum_probs=118.1
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.||+++|+||++||.++ +.+ ...+|.++++++++|+.+|+|+|||++.++.+++.+++
T Consensus 39 l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~---------~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~~~~~ll 109 (172)
T 3htm_A 39 LCVAGQEFQAHKAILAARSPVFSAMFEHE---------MEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 109 (172)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHHSC---------CCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTHHHHH
T ss_pred EEECCEEEEeeHHHHHHcCHHHHHHHccC---------ccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 46899999999999999999999999985 445 44889999999999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCChhHHHHHHHHHHhcC
Q psy11551 80 YVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQR 134 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~ 134 (705)
.+|++|+++.++..|+++|.+.++.+||+.++.+|..|+++.|.+.|.+||.+|.
T Consensus 110 ~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~ 164 (172)
T 3htm_A 110 AAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998653
No 19
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.86 E-value=1.4e-22 Score=181.07 Aligned_cols=116 Identities=21% Similarity=0.291 Sum_probs=105.4
Q ss_pred CCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEc-CCCCHHHHH
Q psy11551 219 PNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEV-PDVEPSAFL 297 (705)
Q Consensus 219 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l-~~v~~~~f~ 297 (705)
..+..+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.+++.++ ..+.+ .++++++|+
T Consensus 7 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~yF~~mf~~~~~e~-~~i~l~~~v~~~~f~ 81 (124)
T 2ihc_A 7 YESSVHSTNVLLSLNDQRKKDVLCDVTIFVEG----QRFRAHRSVLAACSSYFHSRIVGQADGE-LNITLPEEVTVKGFE 81 (124)
T ss_dssp EECSSHHHHHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHBHHHHHHHTTC---C-EEEECCTTSCHHHHH
T ss_pred ecCcchHHHHHHHHHHHHhcCCCcCEEEEECC----EEEecHHHHHHHcCHHHHHHHcCCCCCC-ceEeecCCcCHHHHH
Confidence 34567889999999999999999999999998 9999999999999999999999988764 57888 499999999
Q ss_pred HHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHH
Q psy11551 298 TLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLE 339 (705)
Q Consensus 298 ~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~ 339 (705)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 82 ~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 82 PLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998864
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.86 E-value=3.5e-22 Score=179.77 Aligned_cols=117 Identities=21% Similarity=0.298 Sum_probs=102.0
Q ss_pred CCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcC-CCCHHHHH
Q psy11551 219 PNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVP-DVEPSAFL 297 (705)
Q Consensus 219 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~-~v~~~~f~ 297 (705)
..|..+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.++ ...+|.++ ++++++|+
T Consensus 11 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~~~~f~ 83 (129)
T 3ga1_A 11 MEIPNFGNSILECLNEQRLQGLYCDVSVVVKG----HAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQPQSFQ 83 (129)
T ss_dssp EECTTHHHHHHHHHHHHHHTTCSCCEEEEETT----EEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCCHHHHH
T ss_pred eecCcHHHHHHHHHHHHHhcCCCcceEEEECC----EEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCCHHHHH
Confidence 35667889999999999999999999999998 999999999999999999999976 33789997 99999999
Q ss_pred HHHHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcC
Q psy11551 298 TLLKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLETSL 342 (705)
Q Consensus 298 ~lL~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l 342 (705)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.+..
T Consensus 84 ~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~~ 128 (129)
T 3ga1_A 84 QILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKVS 128 (129)
T ss_dssp HHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC---------
T ss_pred HHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999998653
No 21
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.85 E-value=4e-22 Score=176.61 Aligned_cols=112 Identities=23% Similarity=0.327 Sum_probs=104.4
Q ss_pred CCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHH
Q psy11551 220 NWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTL 299 (705)
Q Consensus 220 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~l 299 (705)
.++.+.+.+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.++ ...|.++++++++|+.+
T Consensus 6 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~----~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~l 77 (119)
T 2q81_A 6 DFPQHSQHVLEQLNQQRQLGLLCDCTFVVDG----VHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISNAAGLGQV 77 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSCCEEEEETT----EEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCcceEEEECC----EEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHH
Confidence 3456788999999999999999999999998 999999999999999999999863 25678889999999999
Q ss_pred HHhHccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHH
Q psy11551 300 LKYLYCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLE 339 (705)
Q Consensus 300 L~yiYt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~ 339 (705)
|+|+|||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 78 l~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 78 LEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999985
No 22
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.83 E-value=5.4e-21 Score=168.68 Aligned_cols=103 Identities=24% Similarity=0.287 Sum_probs=92.1
Q ss_pred ChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHHHHhH
Q psy11551 224 SKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTLLKYL 303 (705)
Q Consensus 224 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~lL~yi 303 (705)
+...+.+.++ +.++.+|||+|.++| +.|+|||+|||++|+||++ ....|.++++++++|+.+|+|+
T Consensus 15 ~~~~~l~~l~--r~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~~~~f~~ll~fi 80 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRPALCDTLITVGS----QEFPAHSLVLAGVSQQLGR--------RGQWALGEGISPSTFAQLLNFV 80 (119)
T ss_dssp TTCHHHHHHH--HHTTTTCCEEEEETT----EEEEECHHHHHTTCGGGCC--------CEEEECCSSCCHHHHHHHHHHH
T ss_pred chHHHHHHHH--HhcCCCcceEEEECC----EEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCCHHHHHHHHHHH
Confidence 4466666665 678999999999998 9999999999999999973 2368999999999999999999
Q ss_pred ccCCccCChhhHHHHHHHHhhcChhHHHHHHHHHHHh
Q psy11551 304 YCDDIQLEADTVLATLYVAKKYIVPHLARACVTYLET 340 (705)
Q Consensus 304 Yt~~~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~ 340 (705)
|||++.++.+++.+++.+|++|+++.|++.|++++.+
T Consensus 81 Ytg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 81 YGESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998764
No 23
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.82 E-value=3.4e-20 Score=163.13 Aligned_cols=107 Identities=19% Similarity=0.282 Sum_probs=99.8
Q ss_pred CCCCCCChhhHHHHHHHHHcCCCCccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHH
Q psy11551 218 DPNWQASKPTVRERNAAMFNNELMADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFL 297 (705)
Q Consensus 218 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~ 297 (705)
...++.+...+.+.++.+++++.+|||+|.++| +.|+|||.||+++|+||++||.++ ..+|.++++++++|+
T Consensus 8 ~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~----~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~~~~f~ 79 (116)
T 3fkc_A 8 SATDIQYSGSLLNSLNEQRGHGLFCDVTVIVED----RKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIRAEIFA 79 (116)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETT----EEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHH
T ss_pred eecCccHHHHHHHHHHHHHhcCCceeEEEEECC----EEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHH
Confidence 445667899999999999999999999999998 999999999999999999999875 368999999999999
Q ss_pred HHHHhHccCCc-cCChhhHHHHHHHHhhcChhHHHH
Q psy11551 298 TLLKYLYCDDI-QLEADTVLATLYVAKKYIVPHLAR 332 (705)
Q Consensus 298 ~lL~yiYt~~~-~i~~~~v~~ll~~A~~~~l~~L~~ 332 (705)
.+|+|+|||++ .++.+++.+++.+|++|+++.|++
T Consensus 80 ~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 80 EILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 99999999999 799999999999999999999874
No 24
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.82 E-value=3.3e-20 Score=193.70 Aligned_cols=124 Identities=28% Similarity=0.400 Sum_probs=115.4
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|++|+|||.|||+|||||++||.++ +.+ ...+|.++++++++|+.+|+|+|||++++..+++.+++
T Consensus 179 l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~---------~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~ll 249 (312)
T 3hqi_A 179 LCVAGQEFQAHKAILAARSPVFSAMFEHE---------MEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 249 (312)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHTTC--------------CCSEEEECSSCHHHHHHHHHHHHHSCCTTHHHHHHHHH
T ss_pred EEECCEEEeHHHHHHHHcCHHHHHHhccC---------ccccCCceEEecCCCHHHHHHHHHhhcCCCCCChHHHHHHHH
Confidence 46899999999999999999999999995 445 45889999999999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCChhHHHHHHHHHHhc
Q psy11551 80 YVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQ 133 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~ 133 (705)
.+|++|+++.++..|+++|.+.++.+||..++.+|+.|++..|++.|.+||..|
T Consensus 250 ~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~ 303 (312)
T 3hqi_A 250 AAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYH 303 (312)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999864
No 25
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.81 E-value=1e-20 Score=174.13 Aligned_cols=115 Identities=30% Similarity=0.410 Sum_probs=82.7
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.||+++|+||++||.++ +.+ ....|.++++++++|+.+|+|+|||+++++.+++.+++
T Consensus 30 l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~---------~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll 100 (145)
T 4eoz_A 30 LCVAGQEFQAHKAILAARSPVFSAMFEHE---------MEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLL 100 (145)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHHSS---------SHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTHHHHH
T ss_pred EEECCEEEEeehHHHHHcCHHHHHHHcCC---------CcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHHHHHHHH
Confidence 46899999999999999999999999985 444 35889999999999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHHhcCCHHHHHHHHHHHhhCCChhHHH
Q psy11551 80 YVAKKYIVPHLARACVTYLETSLTAKNACLLLSQSRLFEEPDLMQ 124 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~ 124 (705)
.+|++|+++.++..|+++|.+.++.+||+.++.+|+.|++++|++
T Consensus 101 ~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 101 AAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHHTTCHHHHHHHHCC---------------------------
T ss_pred HHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 999999999999999999999999999999999999999998863
No 26
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.75 E-value=1.6e-18 Score=150.92 Aligned_cols=93 Identities=74% Similarity=1.175 Sum_probs=82.1
Q ss_pred CeecC----eeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHH
Q psy11551 1 MIRHT----QTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVL 76 (705)
Q Consensus 1 l~v~g----~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~ 76 (705)
|.|+| +.|+|||.||+++||||++||.++ +.++..+|.++++++++|+.+|+|+|||+++++.+++.
T Consensus 13 l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~---------~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~~~ 83 (109)
T 2vkp_A 13 FVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGD---------LAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEADTVL 83 (109)
T ss_dssp EEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTTTHH
T ss_pred EEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCC---------cccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHHHHH
Confidence 35777 899999999999999999999985 45555889999999999999999999999999999999
Q ss_pred HHHHHHhhcCcHHHHHHHHHHHHhcC
Q psy11551 77 ATLYVAKKYIVPHLARACVTYLETSL 102 (705)
Q Consensus 77 ~ll~~A~~~~~~~l~~~c~~~l~~~l 102 (705)
+++.+|++|+++.+++.|+++|.+.+
T Consensus 84 ~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 84 ATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 99999999999999999999998753
No 27
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=4e-19 Score=152.67 Aligned_cols=94 Identities=11% Similarity=0.151 Sum_probs=89.9
Q ss_pred HHhcChhhHHHHHHhhhcCCCchHHHHHHHHHHHHHHHhhCccCccccCHHHHHHHhhcCCcCc-chHHHHHHHHHHHHh
Q psy11551 549 ETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQAEMALKSEGFVDIDMSTLESVFARETLNC-KEMHLFEAALNWANA 627 (705)
Q Consensus 549 ~~~l~~~n~~~i~~~A~~~~~~~L~~~c~~~i~~n~~~v~~~~~F~~L~~~~l~~il~~d~L~v-~E~~vf~av~~W~~~ 627 (705)
.++|+++||+.++.+|..|++++|.+.|.+||.+||.+|+++++|++|+.+.|..+|++| | +|.+||+||++|++|
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 467999999999999999999999999999999999999999999999999999999998 6 999999999999998
Q ss_pred hccccCCCCchhhHHHHHhhhhhcccC
Q psy11551 628 ECVRRDLEPTAHNKRLVLGNALYLVRI 654 (705)
Q Consensus 628 ~~~~~~~~~~~~~~~~~l~~ll~~iRf 654 (705)
+ .++|+.++++||++||+
T Consensus 82 d---------~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 82 N---------KEEREAFAESLRTSLKE 99 (105)
T ss_dssp T---------HHHHHHHHHHHHHHCCE
T ss_pred C---------HHHHHHHHHHHHHHHHH
Confidence 7 67888999999999995
No 28
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.73 E-value=6.4e-18 Score=151.45 Aligned_cols=92 Identities=26% Similarity=0.554 Sum_probs=85.9
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEc-CCCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEV-PDVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l-~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.||+++|+||++||.++ +.+....|.+ +++++++|+.+|+|+|||++.++.+++.+++
T Consensus 34 l~v~~~~~~aHk~iLaa~S~~F~~~f~~~---------~~e~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll 104 (127)
T 1r29_A 34 IVVSREQFRAHKTVLMACSGLFYSIFTDQ---------LKRNLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVM 104 (127)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHTST---------TTTTCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHH
T ss_pred EEECCEEEehHHHHHHHhCHHHHHHhcCC---------ccCCCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHH
Confidence 46899999999999999999999999985 4556789999 8999999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHHhc
Q psy11551 80 YVAKKYIVPHLARACVTYLETS 101 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~~~ 101 (705)
.+|++|+++.+++.|+++|.++
T Consensus 105 ~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 105 ATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHhCCHHHHHHHHHHHHhc
Confidence 9999999999999999999753
No 29
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.72 E-value=7.2e-18 Score=149.52 Aligned_cols=89 Identities=22% Similarity=0.411 Sum_probs=81.3
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.||+++|+||++||.++ +.+ ....|.++++++++|+.+|+|+|||++.++.+++.+++
T Consensus 30 l~v~~~~~~aHk~vLaa~S~~F~~~f~~~---------~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~~~~~ll 100 (120)
T 2if5_A 30 ILVEGREFPTHRSVLAACSQYFKKLFTSG---------AVVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTANVGDIL 100 (120)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHHC--------------CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGGGHHHHH
T ss_pred EEECCEEEeHHHHHHHHhCHHHHHHhcCC---------ccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHH
Confidence 46899999999999999999999999985 444 45789999999999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHH
Q psy11551 80 YVAKKYIVPHLARACVTYL 98 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l 98 (705)
.+|++|+++.+++.|+++|
T Consensus 101 ~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 101 SAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHh
Confidence 9999999999999999987
No 30
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.72 E-value=9.8e-18 Score=148.80 Aligned_cols=88 Identities=27% Similarity=0.448 Sum_probs=82.8
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATLY 80 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll~ 80 (705)
|.|+|+.|+|||.||+++||||++||.++ ..+|.++++++++|+.+|+|+|||+++++.+++.+++.
T Consensus 33 l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-------------~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~ 99 (121)
T 1buo_A 33 IMVDSQEFHAHRTVLACTSKMFEILFHRN-------------SQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLY 99 (121)
T ss_dssp EEESSCEEEECHHHHHHHCHHHHHHTTSC-------------CSEEEECSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHH
T ss_pred EEECCEEEehhHHHHhhcCHHHHHHHcCC-------------CcEEEeCCCCHHHHHHHHHhhcCCCcCCCHHHHHHHHH
Confidence 46899999999999999999999999873 46799999999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHHhc
Q psy11551 81 VAKKYIVPHLARACVTYLETS 101 (705)
Q Consensus 81 ~A~~~~~~~l~~~c~~~l~~~ 101 (705)
+|++|+++.+++.|+++|.+.
T Consensus 100 ~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 100 AAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHh
Confidence 999999999999999999764
No 31
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.71 E-value=5.3e-18 Score=149.96 Aligned_cols=88 Identities=22% Similarity=0.305 Sum_probs=81.5
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATLY 80 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll~ 80 (705)
|.|+|+.|+|||.||+++||||++||.++ + ...|.++++++++|+.+|+|+|||++.++.+++.+++.
T Consensus 29 l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---------~---~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~v~~ll~ 96 (119)
T 3b84_A 29 LDVGGLVFKAHWSVLACCSHFFQSLYGDG---------S---GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLL 96 (119)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHTTT---------T---CCCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHH
T ss_pred EEECCEEEEeeHHHHhhcCHHHHHHHCCC---------C---CCeEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHH
Confidence 46899999999999999999999999984 2 57899999999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHHh
Q psy11551 81 VAKKYIVPHLARACVTYLET 100 (705)
Q Consensus 81 ~A~~~~~~~l~~~c~~~l~~ 100 (705)
+|++|+++.+++.|+++|.+
T Consensus 97 ~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 97 AARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHHTTCHHHHHHHHHCC--
T ss_pred HHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999998865
No 32
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.71 E-value=6.4e-18 Score=153.67 Aligned_cols=96 Identities=22% Similarity=0.361 Sum_probs=87.9
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcC-CCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVP-DVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~-~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|+|+|+.|+|||.||++||+||++||.++ +.+ ...|.++ ++++++|+.+|+|+|||++.++.+++.+++
T Consensus 41 l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---------~~e-~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~v~~ll 110 (138)
T 2z8h_A 41 VLVEGQRFRAHRSVLAACSSYFHSRIVGQ---------TDA-ELTVTLPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVC 110 (138)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHTTC---------CCT-TEEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHH
T ss_pred EEECCEEEechHHHHHHcCHHHHHHHhcC---------CCC-CceEEeCCCCCHHHHHHHHHHhcCCCcccCHHHHHHHH
Confidence 46899999999999999999999999985 333 3578885 899999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHHhcCCHHH
Q psy11551 80 YVAKKYIVPHLARACVTYLETSLTAKN 106 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~~~l~~~n 106 (705)
.+|++|+++.+++.|+++|.+.++.+|
T Consensus 111 ~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 111 RCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999887665
No 33
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=146.37 Aligned_cols=87 Identities=22% Similarity=0.341 Sum_probs=81.1
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcC--CCCHHHHHHHHHhHhCCcccCChhhHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVP--DVEPSAFLTLLKYLYCDDIQLEADTVLAT 78 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~--~v~~~~f~~lL~yiYt~~~~~~~~~~~~l 78 (705)
|.|+|+.|+|||.||+++|+||++||.++ +...|.++ ++++++|+.+|+|+|||++.++.+++.++
T Consensus 27 l~v~~~~~~aHk~vLaa~S~yF~~~f~~~------------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~~v~~l 94 (116)
T 2vpk_A 27 IVIGEFQFKAHRNVLASFSEYFGAIYRST------------SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEI 94 (116)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHTTC------------CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTTTHHHH
T ss_pred EEECCEEEeccHHHHhhcCHHHHHHHcCC------------CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHHHHHHH
Confidence 46899999999999999999999999982 35677787 99999999999999999999999999999
Q ss_pred HHHHhhcCcHHHHHHHHHHHH
Q psy11551 79 LYVAKKYIVPHLARACVTYLE 99 (705)
Q Consensus 79 l~~A~~~~~~~l~~~c~~~l~ 99 (705)
+.+|++|+++.+++.|+++|.
T Consensus 95 l~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 95 HQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 999999999999999999985
No 34
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.70 E-value=1e-17 Score=153.19 Aligned_cols=89 Identities=20% Similarity=0.397 Sum_probs=81.9
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC---ccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE---NKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLA 77 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e---~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ 77 (705)
|+|+|+.|+|||.|||+||+||++||.++ +.+ ...+|.++++++++|+.+|+|+|||++.++.+++.+
T Consensus 52 l~v~~~~f~aHk~vLaa~S~yF~~mf~~~---------~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~~v~~ 122 (144)
T 2ppi_A 52 LVLDGEEIPVQKNILAAASPYIRTKLNYN---------PPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQD 122 (144)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHHHC---------C-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTTTHHH
T ss_pred EEECCEEEehHHHHHHHcCHHHHHHHcCC---------CccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHH
Confidence 46899999999999999999999999985 332 457899999999999999999999999999999999
Q ss_pred HHHHHhhcCcHHHHHHHHHHH
Q psy11551 78 TLYVAKKYIVPHLARACVTYL 98 (705)
Q Consensus 78 ll~~A~~~~~~~l~~~c~~~l 98 (705)
++.+|++|+++.+++.|+++|
T Consensus 123 ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 123 VVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHhCcHHHHHHHHHHh
Confidence 999999999999999999876
No 35
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.69 E-value=1e-17 Score=151.54 Aligned_cols=93 Identities=22% Similarity=0.292 Sum_probs=80.4
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATLY 80 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll~ 80 (705)
|.|+|+.|+|||.||+++|+||++||.++ + ..+|.++++++++|+.+|+|+|||++.++.+++.+++.
T Consensus 30 l~v~~~~f~aHk~vLaa~S~yF~~mf~~~---------~---~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~v~~ll~ 97 (135)
T 2yy9_A 30 LDVGGLVFKAHWSVLACCSHFFQRIYGDG---------T---GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLL 97 (135)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHTCC----------------CCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHH
T ss_pred EEECCEEEehHHHHHHHhCHHHHHHHcCC---------C---CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 46899999999999999999999999984 2 56799999999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHHhcCCHH
Q psy11551 81 VAKKYIVPHLARACVTYLETSLTAK 105 (705)
Q Consensus 81 ~A~~~~~~~l~~~c~~~l~~~l~~~ 105 (705)
+|++|+++.+++.|+++|.+.+...
T Consensus 98 ~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 98 AAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp HHHHTTCHHHHHHHHHCCC------
T ss_pred HHHHhCcHHHHHHHHHHHHHhccCC
Confidence 9999999999999999998866543
No 36
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.68 E-value=1.9e-17 Score=146.43 Aligned_cols=86 Identities=22% Similarity=0.330 Sum_probs=80.3
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATLY 80 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll~ 80 (705)
|.|+|+.|+|||.||+++|+||++||.++ +.+|.++++++++|+.+|+|+|||++.++.+++.+++.
T Consensus 32 l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-------------~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~ 98 (119)
T 2q81_A 32 FVVDGVHFKAHKAVLAACSEYFKMLFVDQ-------------KDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLA 98 (119)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHHHHC-------------CSGGGGGGCCHHHHHHHHHHHHHSCCCCCTTTHHHHHH
T ss_pred EEECCEEEehhHHHHHHcCHHHHHHHcCC-------------CCEEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHH
Confidence 46899999999999999999999999973 35678889999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHH
Q psy11551 81 VAKKYIVPHLARACVTYLE 99 (705)
Q Consensus 81 ~A~~~~~~~l~~~c~~~l~ 99 (705)
+|++|+++.+++.|++++.
T Consensus 99 ~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 99 VATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHTTCHHHHHHHHHHHT
T ss_pred HHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999985
No 37
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.65 E-value=2.9e-17 Score=147.54 Aligned_cols=89 Identities=20% Similarity=0.395 Sum_probs=76.8
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcC-CCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVP-DVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~-~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.||+++|+||++||.++ ...+|.++ ++++++|+.+|+|+|||++.++.+++.+++
T Consensus 38 l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~------------~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~~~~ll 105 (129)
T 3ga1_A 38 VVVKGHAFKAHRAVLAASSSYFRDLFNNS------------RSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLM 105 (129)
T ss_dssp EEETTEEEEECHHHHHHHBHHHHHHHHHC------------CCSEEECCTTCCHHHHHHHHHHHHHSEEECCTTTHHHHH
T ss_pred EEECCEEEEehHHHHHHcCHHHHHHHcCC------------CCCEEEECCCCCHHHHHHHHHHHhCCccccCHHHHHHHH
Confidence 46899999999999999999999999982 46789996 999999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHHhc
Q psy11551 80 YVAKKYIVPHLARACVTYLETS 101 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~~~ 101 (705)
.+|++|+++.+++.|+++|.+.
T Consensus 106 ~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 106 YTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHTTBTTSSCC--------
T ss_pred HHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999999764
No 38
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=7.1e-17 Score=138.62 Aligned_cols=94 Identities=11% Similarity=0.151 Sum_probs=89.7
Q ss_pred HhcCChhhHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHhCCcccccCCHHHHHhccccCCccc-ChHHHHHHHHHHHHh
Q psy11551 339 ETSLTAKNACLLLSQSRLFEEPDLMQRCWEVIDAQAEMALKSEGFVDIDMSTLESVFARETLNC-KEMHLFEAALNWANA 417 (705)
Q Consensus 339 ~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~v~~~~~f~~L~~~~l~~ll~~~~l~v-~E~~vf~av~~W~~~ 417 (705)
.+.++++||+.++.+|+.|++.+|.+.|.+||.+||.++.++++|.+|+.+.+..+|++| + +|.+||+|+++|++|
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv~~ 81 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWINF 81 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHHHT
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999999999999999999999999999999997 6 899999999999999
Q ss_pred hccccCCCCChhhhHHhHhhhhccccc
Q psy11551 418 ECVRRDLEPTAHNKRLVLGNALYLVRI 444 (705)
Q Consensus 418 ~~~~~~~~~~~~~r~~~~~~ll~~vRf 444 (705)
+ ++.|.++++.||++||+
T Consensus 82 d---------~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 82 N---------KEEREAFAESLRTSLKE 99 (105)
T ss_dssp T---------HHHHHHHHHHHHHHCCE
T ss_pred C---------HHHHHHHHHHHHHHHHH
Confidence 7 68899999999999995
No 39
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.65 E-value=1.6e-17 Score=148.43 Aligned_cols=88 Identities=23% Similarity=0.441 Sum_probs=80.7
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCC-CCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPD-VEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~-v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.||+++|+||++||.++ +.+ ...|.+++ +++++|+.+|+|+|||++.++.+++.+++
T Consensus 37 l~v~~~~f~aHk~vLaa~S~yF~~~f~~~---------~~e-~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~~v~~ll 106 (125)
T 3ohu_A 37 LIVERKEFRAHRAVLAACSEYFWQALVGQ---------TKN-DLVVSLPEEVTARGFGPLLQFAYTAKLLLSRENIREVI 106 (125)
T ss_dssp EEETTEEEEECHHHHHHHBHHHHHHHTTC---------CCS-SCEEECCTTCCHHHHHHHHHHHTTSEEEECTTTHHHHH
T ss_pred EEECCEEEechHHHHHHcCHHHHHHhcCC---------CCC-CcEEEeCCCCCHHHHHHHHHhHcCCceEECHHHHHHHH
Confidence 46899999999999999999999999985 333 67899998 99999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHH
Q psy11551 80 YVAKKYIVPHLARACVTYL 98 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l 98 (705)
.+|++|+++.+++.|++||
T Consensus 107 ~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 107 RCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHhCCHHHHHHHHHhC
Confidence 9999999999999987653
No 40
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.64 E-value=2e-17 Score=147.39 Aligned_cols=89 Identities=24% Similarity=0.386 Sum_probs=79.6
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcC-CCCHHHHHHHHHhHhCCcccCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVP-DVEPSAFLTLLKYLYCDDIQLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~-~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.|||++|+||++||.++ +.+ ...|.++ ++++++|+.+|+|+|||++.++.+++.+++
T Consensus 34 l~v~~~~~~aHk~vLaa~S~yF~~mf~~~---------~~e-~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~~v~~ll 103 (124)
T 2ihc_A 34 IFVEGQRFRAHRSVLAACSSYFHSRIVGQ---------ADG-ELNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVC 103 (124)
T ss_dssp EEETTEEEEECHHHHHHHBHHHHHHHTTC-------------CEEEECCTTSCHHHHHHHHHHHHHSEEEEETTTHHHHH
T ss_pred EEECCEEEecHHHHHHHcCHHHHHHHcCC---------CCC-CceEeecCCcCHHHHHHHHHHhcCCCcccCHHHHHHHH
Confidence 46899999999999999999999999985 333 3578884 899999999999999999999999999999
Q ss_pred HHHhhcCcHHHHHHHHHHHH
Q psy11551 80 YVAKKYIVPHLARACVTYLE 99 (705)
Q Consensus 80 ~~A~~~~~~~l~~~c~~~l~ 99 (705)
.+|++|+++.+++.|+++|.
T Consensus 104 ~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 104 KCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHHHCCHHHHHHHHHHHh
Confidence 99999999999999988764
No 41
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.62 E-value=2.8e-16 Score=138.35 Aligned_cols=83 Identities=24% Similarity=0.305 Sum_probs=75.8
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhhHHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADTVLATLY 80 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~~~~ll~ 80 (705)
|.|+|+.|+|||.|||++|+||++ ....|.++++++++|+.+|+|+|||++.++.+++.+++.
T Consensus 35 l~v~~~~f~aHk~vLaa~S~yF~~-----------------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~~ll~ 97 (119)
T 3m5b_A 35 ITVGSQEFPAHSLVLAGVSQQLGR-----------------RGQWALGEGISPSTFAQLLNFVYGESVELQPGELRPLQE 97 (119)
T ss_dssp EEETTEEEEECHHHHHTTCGGGCC-----------------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGHHHHHH
T ss_pred EEECCEEEeeEHHHHHHcCHHHhc-----------------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHH
Confidence 468999999999999999999973 135789999999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHHh
Q psy11551 81 VAKKYIVPHLARACVTYLET 100 (705)
Q Consensus 81 ~A~~~~~~~l~~~c~~~l~~ 100 (705)
+|++|+++.+++.|++++..
T Consensus 98 aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 98 AARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHTTCHHHHHHHHHHC--
T ss_pred HHHHhCCHHHHHHHHHHHhh
Confidence 99999999999999998764
No 42
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.59 E-value=1.3e-15 Score=133.79 Aligned_cols=79 Identities=22% Similarity=0.371 Sum_probs=73.8
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcc-cCChhhHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDI-QLEADTVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~-~~~~~~~~~ll 79 (705)
|.|+|+.|+|||.|||++|+||++||.++ ..+|.++++++++|+.+|+|+|||++ .++.+++.+++
T Consensus 36 l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-------------~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll 102 (116)
T 3fkc_A 36 VIVEDRKFRAHKNILSASSTYFHQLFSVA-------------GQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELI 102 (116)
T ss_dssp EEETTEEEEECHHHHHHHCHHHHHHTTSC-------------CSEEEECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHH
T ss_pred EEECCEEEehhHHHHHHcCHHHHHHHcCC-------------CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHH
Confidence 46899999999999999999999999983 56899999999999999999999999 79999999999
Q ss_pred HHHhhcCcHHHHH
Q psy11551 80 YVAKKYIVPHLAR 92 (705)
Q Consensus 80 ~~A~~~~~~~l~~ 92 (705)
.+|++|+++.+++
T Consensus 103 ~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 103 KSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHTCHHHHT
T ss_pred HHHHHhCccccCc
Confidence 9999999999864
No 43
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.41 E-value=7.3e-13 Score=122.63 Aligned_cols=112 Identities=13% Similarity=0.237 Sum_probs=91.0
Q ss_pred EEEEeCCCCCceeEeeehhhhhccCHHHHHhhcC-CCC-CCc-ceEEcCCCCHHHHHHHHHhHccCC-------------
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYG-GLA-ENK-EEIEVPDVEPSAFLTLLKYLYCDD------------- 307 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~-~~~-e~~-~~i~l~~v~~~~f~~lL~yiYt~~------------- 307 (705)
|+|+..+ |+.|.+||.+ |+.|+||++||.+ ++. |+. ..|.+++|++.+++.+++|+|++.
T Consensus 3 v~L~ssD---g~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 3 IKLQSSD---GEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp EEEECTT---SCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC---------
T ss_pred EEEEcCC---CCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 6777654 4999999999 8899999999998 776 555 789999999999999999999988
Q ss_pred -------------ccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcC---ChhhHHHHHHHHhhcCC
Q psy11551 308 -------------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSL---TAKNACLLLSQSRLFEE 359 (705)
Q Consensus 308 -------------~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l---~~~n~~~~l~~a~~~~~ 359 (705)
+.++.+++.+|+.||++|++..|.+.|++++...+ +++.+..++.+...|..
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~ 146 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 146 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCT
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCH
Confidence 78899999999999999999999999999997766 44444444444444433
No 44
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.20 E-value=4.9e-11 Score=100.33 Aligned_cols=80 Identities=20% Similarity=0.292 Sum_probs=66.3
Q ss_pred EEEEeCCCCCceeEeeehhhhhccCHHHHHhhcC--CCCCCc-ceEEcCCCCHHHHHHHHHhHc-----c---CCcc---
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYG--GLAENK-EEIEVPDVEPSAFLTLLKYLY-----C---DDIQ--- 309 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~--~~~e~~-~~i~l~~v~~~~f~~lL~yiY-----t---~~~~--- 309 (705)
|+++..| |+.|.|||.+ |+.|+||++||.+ ++.|+. ..|.++++++.+++.+++|+| + ++++
T Consensus 4 v~L~SsD---g~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~ 79 (97)
T 4ajy_C 4 VKLISSD---GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 79 (97)
T ss_dssp EEEECTT---CCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCC
T ss_pred EEEEecC---CcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCc
Confidence 5666655 4999999999 9999999999987 666766 899999999999999999999 5 6676
Q ss_pred CChhhHHHHHHHHhhcCh
Q psy11551 310 LEADTVLATLYVAKKYIV 327 (705)
Q Consensus 310 i~~~~v~~ll~~A~~~~l 327 (705)
++.+++.+|+.||++|++
T Consensus 80 i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 80 IAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCGGGHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHhhhCC
Confidence 899999999999999874
No 45
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.12 E-value=1.5e-10 Score=107.10 Aligned_cols=107 Identities=11% Similarity=0.208 Sum_probs=86.3
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcC-C-ccCeEEcCCCCHHHHHHHHHhHhCCc-------------
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLA-E-NKEEIEVPDVEPSAFLTLLKYLYCDD------------- 67 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~-e-~~~~i~l~~v~~~~f~~lL~yiYt~~------------- 67 (705)
.+|+.|.|||.+ |+.|+||++||.+. ++. + ....|++++|++.+++.+++|+|++.
T Consensus 8 sDg~~f~v~~~v-A~~S~~i~~m~~~~--------~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~ 78 (159)
T 2ast_A 8 SDGEIFEVDVEI-AKQSVTIKTMLEDL--------GMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKE 78 (159)
T ss_dssp TTSCEEEEEHHH-HHTCHHHHHHTTSS--------CSS------CEECTTSCHHHHHHHHHHHHHTTTCCC---------
T ss_pred CCCCEEEeCHHH-HHHhHHHHHHHHhc--------CCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccc
Confidence 489999999999 89999999999872 133 3 34689999999999999999999987
Q ss_pred -------------ccCChhhHHHHHHHHhhcCcHHHHHHHHHHHHhcC---CHHHHHHHHHHHhhCC
Q psy11551 68 -------------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSL---TAKNACLLLSQSRLFE 118 (705)
Q Consensus 68 -------------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~~A~~~~ 118 (705)
+.++.+++.+|+.+|+++++..|.+.|++++...+ +++.+..++.+...+.
T Consensus 79 ~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t 145 (159)
T 2ast_A 79 KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFT 145 (159)
T ss_dssp --CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSC
T ss_pred cchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 67888899999999999999999999999997644 5555555554444443
No 46
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.05 E-value=6.1e-10 Score=100.49 Aligned_cols=99 Identities=10% Similarity=0.162 Sum_probs=85.1
Q ss_pred EEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHHHHhHccCC----------------
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDD---------------- 307 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~---------------- 307 (705)
|+++..+ |+.|.+|+.+ |..|++|++||.+.- ...|.+++|++.+++.+++|+|+..
T Consensus 4 v~L~SsD---g~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSD---GEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTT---SCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCC---CCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 6777765 4999999998 889999999998631 4579999999999999999999865
Q ss_pred ----------ccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcCChhhHHH
Q psy11551 308 ----------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKNACL 349 (705)
Q Consensus 308 ----------~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l~~~n~~~ 349 (705)
+.++.+++.+|+.||+++++..|.+.|++++...+...+.-+
T Consensus 77 ~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~ee 128 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEE 128 (141)
T ss_dssp ----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHH
Confidence 668889999999999999999999999999998776555433
No 47
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.94 E-value=2.6e-10 Score=105.31 Aligned_cols=109 Identities=11% Similarity=0.169 Sum_probs=62.2
Q ss_pred EEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCcceEEcCCCCHHHHHHHHHhHccCC----------------
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDD---------------- 307 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~---------------- 307 (705)
|+|+..+ |+.|.+|+.+ |..|++|++||.+.. ....|.+++|++.+++.+++|+|+..
T Consensus 6 v~L~SsD---g~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 79 (160)
T 2p1m_A 6 IVLKSSD---GESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATS 79 (160)
T ss_dssp --CCC------------CHH-HHTCTTTC--------------CCTTSCHHHHHHHHHC---------------------
T ss_pred EEEEcCC---CCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccc
Confidence 5666544 4999999998 789999999998642 22689999999999999999999976
Q ss_pred -----------ccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcC---ChhhHHHHHHHHhhcC
Q psy11551 308 -----------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSL---TAKNACLLLSQSRLFE 358 (705)
Q Consensus 308 -----------~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l---~~~n~~~~l~~a~~~~ 358 (705)
+.++.+++.+|+.||++|++..|.+.|++++...+ +++.+..++.+...|.
T Consensus 80 ~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 80 DDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp ---------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred cchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 35778899999999999999999999999999988 6777666665555544
No 48
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.86 E-value=4.4e-09 Score=88.28 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=63.1
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHh-----C---Cccc---C
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLY-----C---DDIQ---L 70 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiY-----t---~~~~---~ 70 (705)
.+|+.|.|||.+ |+.|+||++||.+. +++.| ....|+++++++.+++.+++|+| + ++++ +
T Consensus 9 sDg~~F~v~r~v-A~~S~~ik~m~~~~-------~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 9 SDGHEFIVKREH-ALTSGTIKAMLSGP-------GQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp TTCCEEEEEHHH-HTTSHHHHHHHCCC---------------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred cCCcEEEecHHH-HHHhHHHHHHHHhC-------CCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 389999999999 99999999999872 12344 35789999999999999999999 5 6676 8
Q ss_pred ChhhHHHHHHHHhhcC
Q psy11551 71 EADTVLATLYVAKKYI 86 (705)
Q Consensus 71 ~~~~~~~ll~~A~~~~ 86 (705)
+.+++.+|+.+|++++
T Consensus 81 ~~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 81 APEIALELLMAANFLD 96 (97)
T ss_dssp CGGGHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhhC
Confidence 8999999999999886
No 49
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.71 E-value=1.7e-08 Score=90.91 Aligned_cols=91 Identities=11% Similarity=0.213 Sum_probs=78.4
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCc---------------
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDD--------------- 67 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~--------------- 67 (705)
.+|+.|.+|+.+ |..|++|++||.+. + ...|++++|+..+++.+++|+|...
T Consensus 9 sDg~~f~v~~~v-A~~S~~ik~ml~~~--------~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 9 SDGEIFEVDVEI-AKQSVTIKTMLEDL--------G----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp TTSCEEEEEGGG-GGTCHHHHHHHHHT--------C----CSSEECTTCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CCCCEEEecHHH-HHHhHHHHHHHHhc--------C----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 389999999998 88999999999872 1 4579999999999999999999765
Q ss_pred -----------ccCChhhHHHHHHHHhhcCcHHHHHHHHHHHHhcCCHHH
Q psy11551 68 -----------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSLTAKN 106 (705)
Q Consensus 68 -----------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n 106 (705)
+.++.+++.+|+.+|+++++..|.+.|++++...+.-.+
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt 125 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 125 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCC
Confidence 557778899999999999999999999999987554333
No 50
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.65 E-value=8.5e-09 Score=95.10 Aligned_cols=102 Identities=11% Similarity=0.148 Sum_probs=58.0
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCc---------------
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDD--------------- 67 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~--------------- 67 (705)
.+|+.|.+|+.+ |..|++|++||.+. .....|++++|+..+++.+++|+|...
T Consensus 11 sDg~~f~v~~~v-A~~S~~ik~ml~~~-----------~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 11 SDGESFEVEEAV-ALESQTIAHMVEDD-----------CVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAAT 78 (160)
T ss_dssp ---------CHH-HHTCTTTC-----------------------CCTTSCHHHHHHHHHC--------------------
T ss_pred CCCCEEEECHHH-HHHhHHHHHHHHcc-----------CCCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccc
Confidence 489999999998 78999999999873 123579999999999999999999876
Q ss_pred ------------ccCChhhHHHHHHHHhhcCcHHHHHHHHHHHHhcC---CHHHHHHHHHHHhh
Q psy11551 68 ------------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSL---TAKNACLLLSQSRL 116 (705)
Q Consensus 68 ------------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~~A~~ 116 (705)
+.++.+.+.+|+.+|+++++..|.+.|++++...+ +++.+..++.++..
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd 142 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKND 142 (160)
T ss_dssp ----------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCC
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCC
Confidence 24566778899999999999999999999999877 66665555554433
No 51
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.46 E-value=4.4e-07 Score=76.04 Aligned_cols=80 Identities=18% Similarity=0.220 Sum_probs=67.9
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCCCc-ceEEcCCCCHHHHHHHHHhHccCC--------------
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAENK-EEIEVPDVEPSAFLTLLKYLYCDD-------------- 307 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e~~-~~i~l~~v~~~~f~~lL~yiYt~~-------------- 307 (705)
-|+++..+ |..|.+++.+ |..|.++++|+.+++ ++. ..|.+++|+..+++.+++|+|...
T Consensus 5 ~v~L~SsD---g~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 5 FVTLVSKD---DKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp EEEEEETT---TEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred EEEEEecC---CCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 36777765 4999999997 789999999999866 444 789999999999999999998743
Q ss_pred ccCChhhHHHHHHHHhhcCh
Q psy11551 308 IQLEADTVLATLYVAKKYIV 327 (705)
Q Consensus 308 ~~i~~~~v~~ll~~A~~~~l 327 (705)
..++.+.+.+|+.||+++++
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 35788899999999999874
No 52
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.39 E-value=5.9e-07 Score=74.83 Aligned_cols=80 Identities=20% Similarity=0.290 Sum_probs=63.9
Q ss_pred EEEEeCCCCCceeEeeehhhhhccCHHHHHhhcC-C-CCCCc-ceEEcCCCCHHHHHHHHHhHccCC-----------cc
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYG-G-LAENK-EEIEVPDVEPSAFLTLLKYLYCDD-----------IQ 309 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~-~-~~e~~-~~i~l~~v~~~~f~~lL~yiYt~~-----------~~ 309 (705)
|+++..+ |..|.+++.+ |..|.++++|+.+ + +.|+. ..|.+++|+..+++.+++|+|... ..
T Consensus 3 v~L~SsD---g~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSD---GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTT---SCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred EEEEecC---CCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 5666655 4999999997 7899999999985 2 24554 789999999999999999998743 35
Q ss_pred CChhhHHHHHHHHhhcCh
Q psy11551 310 LEADTVLATLYVAKKYIV 327 (705)
Q Consensus 310 i~~~~v~~ll~~A~~~~l 327 (705)
++.+.+.+|+.||+++++
T Consensus 79 vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCTTTHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 788899999999999874
No 53
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.38 E-value=2.1e-06 Score=79.54 Aligned_cols=96 Identities=14% Similarity=0.223 Sum_probs=77.1
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCCC----Cc-ceEEcCCCCHHHHHHHHHhHccCC----------
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLAE----NK-EEIEVPDVEPSAFLTLLKYLYCDD---------- 307 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~e----~~-~~i~l~~v~~~~f~~lL~yiYt~~---------- 307 (705)
-|+|+..+ |..|.+++.+ |..|.+++.|+...-.+ .. ..|.|++|+..+++.+++|++...
T Consensus 8 ~i~L~SsD---G~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~ 83 (169)
T 3v7d_A 8 NVVLVSGE---GERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDD 83 (169)
T ss_dssp EEEEECTT---CCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC----
T ss_pred eEEEEeCC---CCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccc
Confidence 57777766 5999999998 67899999999753221 22 689999999999999999997643
Q ss_pred ---------------ccCChhhHHHHHHHHhhcChhHHHHHHHHHHHhcC
Q psy11551 308 ---------------IQLEADTVLATLYVAKKYIVPHLARACVTYLETSL 342 (705)
Q Consensus 308 ---------------~~i~~~~v~~ll~~A~~~~l~~L~~~c~~~l~~~l 342 (705)
+.++.+.+.+|+.||++|++..|.+.|++.+...+
T Consensus 84 ~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 84 DSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp ----CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 24567889999999999999999999999886544
No 54
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.01 E-value=2.5e-05 Score=66.44 Aligned_cols=93 Identities=18% Similarity=0.269 Sum_probs=75.7
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccC-HHHHHhhcCCCC-----CCcceEEcCCCCHHHHHHHHHhHccCCccCChh-hH
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGS-SVFYAMFYGGLA-----ENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TV 315 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S-~yF~~mf~~~~~-----e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~-~v 315 (705)
=|+|.||| +.|...+..|+... .+|.+||.++.. ....++-+ |-+|..|..||+|+.+|++.++.+ ..
T Consensus 7 ~v~LNVGG----~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~ 81 (107)
T 3drz_A 7 WVRLNVGG----TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAE 81 (107)
T ss_dssp EEEEEETT----EEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCH
T ss_pred EEEEEECC----EEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCH
Confidence 37889998 99999999998765 578999976521 11255655 789999999999999999887554 35
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHh
Q psy11551 316 LATLYVAKKYIVPHLARACVTYLET 340 (705)
Q Consensus 316 ~~ll~~A~~~~l~~L~~~c~~~l~~ 340 (705)
..++.-|++|+++.|++.|.+.|.+
T Consensus 82 ~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 82 EGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 7899999999999999999987753
No 55
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.95 E-value=1.8e-05 Score=67.64 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=64.2
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCC--CCCCc-ceEEcCCCCHHHHHHHHHhHccCC-----------c
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGG--LAENK-EEIEVPDVEPSAFLTLLKYLYCDD-----------I 308 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~--~~e~~-~~i~l~~v~~~~f~~lL~yiYt~~-----------~ 308 (705)
-|+++..+ |..|.+++.+ |..|..+++|+... +.++. ..|.|++|+..+++.+++|++... .
T Consensus 18 ~v~L~SsD---G~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w 93 (112)
T 1vcb_B 18 YVKLISSD---GHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEF 93 (112)
T ss_dssp EEEEECTT---SCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCC
T ss_pred EEEEEcCC---CCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCc
Confidence 46777665 4999999995 67899999999852 33444 789999999999999999997643 3
Q ss_pred cCChhhHHHHHHHHhhcCh
Q psy11551 309 QLEADTVLATLYVAKKYIV 327 (705)
Q Consensus 309 ~i~~~~v~~ll~~A~~~~l 327 (705)
.++.+.+.+|+.||+++++
T Consensus 94 ~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCHHHHHHHHHHHHHHTC
T ss_pred ccCHHHHHHHHHHHHHhCc
Confidence 5788899999999999875
No 56
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.88 E-value=3.3e-05 Score=65.63 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=73.6
Q ss_pred CeecCeeeehhHHHHhcCC-HHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChh-hHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGS-SVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLAT 78 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS-~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~-~~~~l 78 (705)
|.|||+.|...+..|+... .+|.+||.+... .. .......++.+ |-+|..|..+|+|+.+|.+.++.+ ....+
T Consensus 10 LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~---~~-~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l 84 (107)
T 3drz_A 10 LNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD---LD-SDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGV 84 (107)
T ss_dssp EEETTEEEEEEHHHHTSSTTSHHHHHHTTCGG---GG-GGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEECCEEEEECHHHHhcCCCcchhHHHhcCCC---CC-cCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHH
Confidence 5799999999999998765 478999887410 00 00123355665 689999999999999999877654 35679
Q ss_pred HHHHhhcCcHHHHHHHHHHHHh
Q psy11551 79 LYVAKKYIVPHLARACVTYLET 100 (705)
Q Consensus 79 l~~A~~~~~~~l~~~c~~~l~~ 100 (705)
++-|.+|+++.|++.|++.|.+
T Consensus 85 ~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 85 LEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHhc
Confidence 9999999999999999887753
No 57
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.86 E-value=2.4e-05 Score=65.37 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=61.1
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCc--------------c
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDD--------------I 68 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~--------------~ 68 (705)
-+|+.|.+++.+ |..|.+++.|+.++ +......|++++|+..+++.+++|+|... .
T Consensus 11 sDg~~f~V~~~v-A~~S~~ik~ml~~~---------~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w 80 (99)
T 1hv2_A 11 KDDKEYEISRSA-AMISPTLKAMIEGP---------FRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEF 80 (99)
T ss_dssp TTTEEEEEEHHH-HTTCHHHHHHHHSS---------TTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCC
T ss_pred cCCCEEEECHHH-HHHhHHHHHHHhcc---------cccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCc
Confidence 489999999997 78999999999873 32334789999999999999999999643 2
Q ss_pred cCChhhHHHHHHHHhhcCc
Q psy11551 69 QLEADTVLATLYVAKKYIV 87 (705)
Q Consensus 69 ~~~~~~~~~ll~~A~~~~~ 87 (705)
.++.+.+.+|+.+|+++++
T Consensus 81 ~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 81 EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHhCc
Confidence 3566678888888887764
No 58
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.84 E-value=9.9e-05 Score=68.23 Aligned_cols=98 Identities=10% Similarity=0.160 Sum_probs=73.8
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHhCCc--------------
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLYCDD-------------- 67 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiYt~~-------------- 67 (705)
-+|+.|.+++.+ |..|..++.|+...- ..+..+ ....|++++|+..++..+++|++...
T Consensus 14 sDG~~F~V~~~v-A~~S~tIk~ml~~~~-----~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~~ 87 (169)
T 3v7d_A 14 GEGERFTVDKKI-AERSLLLKNYLNDMG-----DDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRK 87 (169)
T ss_dssp TTCCEEEEEHHH-HTTSHHHHHHHHC----------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--------
T ss_pred CCCCEEEecHHH-HHHhHHHHHHHHhcC-----cccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccccc
Confidence 379999999998 678999999998630 000111 23789999999999999999998643
Q ss_pred -----------ccCChhhHHHHHHHHhhcCcHHHHHHHHHHHHh---cCCHHH
Q psy11551 68 -----------IQLEADTVLATLYVAKKYIVPHLARACVTYLET---SLTAKN 106 (705)
Q Consensus 68 -----------~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~---~l~~~n 106 (705)
+.++.+.+.+|+.+|+++++..|.+.|++.+.. ..+++.
T Consensus 88 ~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpee 140 (169)
T 3v7d_A 88 SAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEE 140 (169)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred cccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHH
Confidence 134556788999999999999999999998854 444444
No 59
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.80 E-value=2.6e-05 Score=64.78 Aligned_cols=77 Identities=17% Similarity=0.223 Sum_probs=59.9
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCC-ccCeEEcCCCCHHHHHHHHHhHhCCc-----------ccC
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAE-NKEEIEVPDVEPSAFLTLLKYLYCDD-----------IQL 70 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e-~~~~i~l~~v~~~~f~~lL~yiYt~~-----------~~~ 70 (705)
-+|+.|.+++.+ |..|++++.|+.+. +...+ ....|++++|+..+++.+++|+|... ..+
T Consensus 8 sDg~~f~V~~~~-A~~S~~ik~ml~~~-------~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 8 SDGHEFIVKREH-ALTSGTIKAMLSGP-------GQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp TTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred cCCCEEEeCHHH-HHHhHHHHHHHHcc-------CCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 489999999997 78999999999863 11233 23689999999999999999998643 246
Q ss_pred ChhhHHHHHHHHhhcCc
Q psy11551 71 EADTVLATLYVAKKYIV 87 (705)
Q Consensus 71 ~~~~~~~ll~~A~~~~~ 87 (705)
+.+.+.+|+.+|+++++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 67788899999988764
No 60
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.01 E-value=0.00092 Score=56.96 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=58.9
Q ss_pred ecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCc-cCeEEcCCCCHHHHHHHHHhHhCCc-----------ccC
Q psy11551 3 RHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAEN-KEEIEVPDVEPSAFLTLLKYLYCDD-----------IQL 70 (705)
Q Consensus 3 v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~-~~~i~l~~v~~~~f~~lL~yiYt~~-----------~~~ 70 (705)
-+|..|.+++.+ |..|..++.|+.+. +.+.++ ...|++++|+..+++.+++|++... ..+
T Consensus 24 sDG~~F~V~~~~-A~~S~tIk~ml~~~-------~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 24 SDGHEFIVKREH-ALTSGTIKAMLSGP-------GQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp TTSCEEEEEHHH-HHTSHHHHHHSSCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred CCCCEEEECHHH-HHHhHHHHHHHHhc-------CCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 489999999995 67899999999862 112232 3689999999999999999998543 246
Q ss_pred ChhhHHHHHHHHhhcCc
Q psy11551 71 EADTVLATLYVAKKYIV 87 (705)
Q Consensus 71 ~~~~~~~ll~~A~~~~~ 87 (705)
+.+.+.+|+.+|+++++
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 67788889999988764
No 61
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.82 E-value=0.0022 Score=60.09 Aligned_cols=92 Identities=18% Similarity=0.272 Sum_probs=72.9
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccC-HHHHHhhcCCC--C---CCcceEEcCCCCHHHHHHHHHhHccCCccCChh-hH
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGS-SVFYAMFYGGL--A---ENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TV 315 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S-~yF~~mf~~~~--~---e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~-~v 315 (705)
=|+|.||| +.|...+..|.... .+|..||.+.. . ...+++-+ |=++..|..||+|+-+|.+.++.+ ..
T Consensus 13 ~V~LNVGG----~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~ 87 (202)
T 3drx_A 13 WVRLNVGG----TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAE 87 (202)
T ss_dssp EEEEEETT----EEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCH
T ss_pred EEEEEECC----EEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCH
Confidence 36888998 99999999998754 47888987642 1 11255655 678999999999999999987554 34
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHH
Q psy11551 316 LATLYVAKKYIVPHLARACVTYLE 339 (705)
Q Consensus 316 ~~ll~~A~~~~l~~L~~~c~~~l~ 339 (705)
..++.-|++|+++.|.+.|.+.|.
T Consensus 88 ~~l~eEA~FygL~~Lv~~l~~~i~ 111 (202)
T 3drx_A 88 EGVLEEAEFYNITSLIKLVKDKIR 111 (202)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcHHHHHHHHHHHH
Confidence 678999999999999999988775
No 62
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.44 E-value=0.0034 Score=58.77 Aligned_cols=95 Identities=15% Similarity=0.178 Sum_probs=71.9
Q ss_pred CeecCeeeehhHHHHhcCC-HHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChhh-HHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGS-SVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEADT-VLAT 78 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS-~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~~-~~~l 78 (705)
|.|||+.|...+..|.... .+|..||.+... .. .......++.| |-+|..|..||+|+-+|.+.++.+. ...+
T Consensus 16 LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~---~~-~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l 90 (202)
T 3drx_A 16 LNVGGTYFLTTRQTLCRDPKSFLYRLCQADPD---LD-SDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGV 90 (202)
T ss_dssp EEETTEEEEEETTGGGSCTTSSTHHHHSCCCC--------BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEECCEEEEEeHHHHhCCCcchHHHHhcCccc---cC-cccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHH
Confidence 5799999999999998653 378999886310 00 01123455665 5799999999999999999876543 4678
Q ss_pred HHHHhhcCcHHHHHHHHHHHHh
Q psy11551 79 LYVAKKYIVPHLARACVTYLET 100 (705)
Q Consensus 79 l~~A~~~~~~~l~~~c~~~l~~ 100 (705)
++-|.+|+++.|...|.+.+..
T Consensus 91 ~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 91 LEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHHHH
Confidence 9999999999999999887754
No 63
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=94.37 E-value=0.034 Score=48.09 Aligned_cols=85 Identities=13% Similarity=0.151 Sum_probs=61.9
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCC-----CCCCcceEEcCCCCHHHHHHHHHhHccCCccCChh-hHH
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGG-----LAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVL 316 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~-----~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~-~v~ 316 (705)
=|+|.||| +.|..-+..|...-. .||... .....+++-+ |=++..|..||+|+-+|++.++.+ .+.
T Consensus 14 ~V~LNVGG----~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~ 85 (124)
T 1s1g_A 14 LIVLNVSG----RRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECIS 85 (124)
T ss_dssp EEEEEETT----EEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHH
T ss_pred EEEEEeCC----EEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHH
Confidence 47889999 999999999975422 233321 0111145555 569999999999999999987654 478
Q ss_pred HHHHHHhhcChhHHH-HHHH
Q psy11551 317 ATLYVAKKYIVPHLA-RACV 335 (705)
Q Consensus 317 ~ll~~A~~~~l~~L~-~~c~ 335 (705)
.++.-|++|+++.+. +.|+
T Consensus 86 ~l~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 86 AYDDELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHHHHHTTCCGGGBCHHH
T ss_pred HHHHHHHHcCCChHHHHHHH
Confidence 899999999998863 4443
No 64
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.34 E-value=0.026 Score=48.08 Aligned_cols=83 Identities=16% Similarity=0.081 Sum_probs=62.8
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccC-HHHHHhhcCCC--CCCcceEEcCCCCHHHHHHHHHhHccCCccCChh-hHHHH
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGS-SVFYAMFYGGL--AENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLAT 318 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S-~yF~~mf~~~~--~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~-~v~~l 318 (705)
=|+|.||| +.|...+..|.... ..+.+|+.+.. ....+++-+ |=++..|..||+|+-+|++.++.+ .+..+
T Consensus 6 ~V~LNVGG----~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~ 80 (115)
T 3kvt_A 6 RVIINVGG----IRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLF 80 (115)
T ss_dssp EEEEEETT----EEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHH
T ss_pred EEEEEECC----EEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHH
Confidence 37889998 99999999998653 34555665421 112256666 578999999999999999877654 46789
Q ss_pred HHHHhhcChhHH
Q psy11551 319 LYVAKKYIVPHL 330 (705)
Q Consensus 319 l~~A~~~~l~~L 330 (705)
+.-|++|+++..
T Consensus 81 ~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 81 EEELEFWGLDSN 92 (115)
T ss_dssp HHHHHHHTCCGG
T ss_pred HHHHHHhCCChH
Confidence 999999999874
No 65
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.10 E-value=0.022 Score=48.64 Aligned_cols=82 Identities=11% Similarity=-0.001 Sum_probs=61.4
Q ss_pred CeecCeeeehhHHHHhcCCH-HHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChh-hHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSS-VFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLAT 78 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~-~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~-~~~~l 78 (705)
|.|||+.|...+..|..... .|..|+.+.. .......++.+ |=++..|..+|+|+-+|.+.++.+ .+..+
T Consensus 9 LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~-------~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~ 80 (115)
T 3kvt_A 9 INVGGIRHETYKATLKKIPATRLSRLTEGML-------NYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLF 80 (115)
T ss_dssp EEETTEEEEEEHHHHTTSCSSTTTTCCTTST-------TEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHH
T ss_pred EEECCEEEEecHHHHhcCCCccHHHHhcCCC-------CCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHH
Confidence 57999999999999986532 4555655420 12234566666 589999999999999999877654 46778
Q ss_pred HHHHhhcCcHHH
Q psy11551 79 LYVAKKYIVPHL 90 (705)
Q Consensus 79 l~~A~~~~~~~l 90 (705)
++-|.+|+++..
T Consensus 81 ~~Ea~fy~i~~~ 92 (115)
T 3kvt_A 81 EEELEFWGLDSN 92 (115)
T ss_dssp HHHHHHHTCCGG
T ss_pred HHHHHHhCCChH
Confidence 999999998875
No 66
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.26 E-value=0.06 Score=46.53 Aligned_cols=86 Identities=12% Similarity=0.072 Sum_probs=60.4
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChh-hHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~-~~~~ll 79 (705)
|.|||+.|..-+..|...-. .+|.... ..........++.+ |=++..|..||+|+-+|.+.++.+ .+..++
T Consensus 17 LNVGG~~F~t~~~TL~~~p~---S~L~~~~----~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 88 (124)
T 1s1g_A 17 LNVSGRRFQTWRTTLERYPD---TLLGSTE----KEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYD 88 (124)
T ss_dssp EEETTEEEEEEHHHHTTSTT---SSTTSSG----GGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEeCCEEEEEeHHHHhcCCC---ceecccC----CcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 47999999999999975422 2333210 00011223456666 569999999999999999877654 477899
Q ss_pred HHHhhcCcHHHH-HHH
Q psy11551 80 YVAKKYIVPHLA-RAC 94 (705)
Q Consensus 80 ~~A~~~~~~~l~-~~c 94 (705)
+-|++|+++.+. +.|
T Consensus 89 ~Ea~fy~i~~l~l~~c 104 (124)
T 1s1g_A 89 DELAFYGILPEIIGDC 104 (124)
T ss_dssp HHHHHTTCCGGGBCHH
T ss_pred HHHHHcCCChHHHHHH
Confidence 999999999873 444
No 67
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.65 E-value=0.057 Score=44.70 Aligned_cols=83 Identities=10% Similarity=-0.034 Sum_probs=58.7
Q ss_pred CeecCeeeehhHHHHhcCCH-HHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhC-CcccCChh-hHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSS-VFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYC-DDIQLEAD-TVLA 77 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~-~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt-~~~~~~~~-~~~~ 77 (705)
|.|||+.|...+..|+..-. .+..|+... ......+.++.+ |=++..|..+|+|+-+ |++.++.+ .+..
T Consensus 5 LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~-------~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~ 76 (100)
T 1t1d_A 5 INVSGLRFETQLKTLNQFPDTLLGNPQKRN-------RYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDV 76 (100)
T ss_dssp EEETTEEEEEEHHHHHTSTTSTTTCHHHHG-------GGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHH
T ss_pred EEECCEEEEeeHHHHhcCCCccccchhccc-------cccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHH
Confidence 57999999999999965411 233333321 012224466666 5799999999999998 88866544 4677
Q ss_pred HHHHHhhcCcHHHH
Q psy11551 78 TLYVAKKYIVPHLA 91 (705)
Q Consensus 78 ll~~A~~~~~~~l~ 91 (705)
+++-|++|+++.+.
T Consensus 77 ~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 77 FSEEIKFYELGENA 90 (100)
T ss_dssp HHHHHHHTTCCHHH
T ss_pred HHHHHHHcCCCHHH
Confidence 99999999998753
No 68
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=91.72 E-value=0.044 Score=45.89 Aligned_cols=79 Identities=9% Similarity=0.079 Sum_probs=58.5
Q ss_pred EEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCC-----CCcceEEcCCCCHHHHHHHHHhHccCCccCChh-hHHH
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLA-----ENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLA 317 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~-----e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~-~v~~ 317 (705)
|++.||| +.|...+..|..... .||...-. ...+++-+ |=++..|..||+|+-+|++.++.+ .+..
T Consensus 2 V~LNVGG----~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~ 73 (105)
T 1nn7_A 2 IVLNVSG----TRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISA 73 (105)
T ss_dssp EEEEETT----EEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred EEEEECC----EEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 6889999 999999999976432 23333100 01145555 568999999999999999887554 4788
Q ss_pred HHHHHhhcChhHH
Q psy11551 318 TLYVAKKYIVPHL 330 (705)
Q Consensus 318 ll~~A~~~~l~~L 330 (705)
++.-|++|+++.+
T Consensus 74 l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 74 YDEELAFFGLIPE 86 (105)
T ss_dssp HHHHHHHHTCCSC
T ss_pred HHHHHHHcCCCHH
Confidence 9999999999875
No 69
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=91.71 E-value=0.11 Score=43.03 Aligned_cols=83 Identities=12% Similarity=0.005 Sum_probs=59.1
Q ss_pred EEEEeCCCCCceeEeeehhhhhccC-HHHHHhhcC--CCCCCcceEEcCCCCHHHHHHHHHhHcc-CCccCChh-hHHHH
Q psy11551 244 VKFVVGSSGHTQTIPAHKYVLATGS-SVFYAMFYG--GLAENKEEIEVPDVEPSAFLTLLKYLYC-DDIQLEAD-TVLAT 318 (705)
Q Consensus 244 v~l~v~~~~~~~~~~aHk~iLaa~S-~yF~~mf~~--~~~e~~~~i~l~~v~~~~f~~lL~yiYt-~~~~i~~~-~v~~l 318 (705)
|+|.||| +.|...+..|...- ..+.+|+.. .+....+++-+ |=++..|+.||+|+-+ |++.++.+ .+..+
T Consensus 3 v~LNVGG----~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~ 77 (100)
T 1t1d_A 3 VVINVSG----LRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVF 77 (100)
T ss_dssp EEEEETT----EEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHH
T ss_pred EEEEECC----EEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHH
Confidence 6889998 99999999996531 122233321 11112256666 6689999999999998 89876544 46789
Q ss_pred HHHHhhcChhHHH
Q psy11551 319 LYVAKKYIVPHLA 331 (705)
Q Consensus 319 l~~A~~~~l~~L~ 331 (705)
+.-|++|+++.+.
T Consensus 78 ~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 78 SEEIKFYELGENA 90 (100)
T ss_dssp HHHHHHTTCCHHH
T ss_pred HHHHHHcCCCHHH
Confidence 9999999998744
No 70
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=91.68 E-value=0.15 Score=44.98 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=60.4
Q ss_pred ccEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcCCCC-----CCcceEEcCCCCHHHHHHHHHhHccCCccCChh-hH
Q psy11551 242 ADVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYGGLA-----ENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TV 315 (705)
Q Consensus 242 ~Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~~~~-----e~~~~i~l~~v~~~~f~~lL~yiYt~~~~i~~~-~v 315 (705)
.=|+|.||| +.|...+..|...- ..||...-. ...+++-+ |=++..|..||+|+-+|++.++.+ .+
T Consensus 35 ~~V~LNVGG----~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~ 106 (140)
T 2nz0_B 35 ELIVLNVSG----RRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECI 106 (140)
T ss_dssp CEEEEEETT----EEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCH
T ss_pred CEEEEEECC----EEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCH
Confidence 348899999 99999999997542 234433100 11155655 569999999999999999887554 47
Q ss_pred HHHHHHHhhcChhHH
Q psy11551 316 LATLYVAKKYIVPHL 330 (705)
Q Consensus 316 ~~ll~~A~~~~l~~L 330 (705)
..++.-|++|+++.+
T Consensus 107 ~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 107 SAYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHHTCCGG
T ss_pred HHHHHHHHHcCCChH
Confidence 889999999999886
No 71
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=90.01 E-value=0.066 Score=44.83 Aligned_cols=82 Identities=7% Similarity=-0.009 Sum_probs=58.1
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChh-hHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~-~~~~ll 79 (705)
|.|||+.|...+..|..... .||.... ..........++.+ |=++..|..+|+|+-+|.+.++.+ .+..++
T Consensus 4 LNVGG~~f~t~~~TL~~~p~---s~L~~~~----~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 4 LNVSGTRFQTWQDTLERYPD---TLLGSSE----RDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEETTEEEEECHHHHHTSCS---SSTTSGG----GGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEECCEEEEEeHHHHhcCCC---ccccccC----CcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 47999999999999976422 2333210 00011223456666 469999999999999999876654 467799
Q ss_pred HHHhhcCcHHH
Q psy11551 80 YVAKKYIVPHL 90 (705)
Q Consensus 80 ~~A~~~~~~~l 90 (705)
+-|++|+++.+
T Consensus 76 ~Ea~fy~i~~l 86 (105)
T 1nn7_A 76 EELAFFGLIPE 86 (105)
T ss_dssp HHHHHHTCCSC
T ss_pred HHHHHcCCCHH
Confidence 99999999876
No 72
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=89.82 E-value=0.23 Score=43.80 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=58.5
Q ss_pred CeecCeeeehhHHHHhcCCHHHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhCCcccCChh-hHHHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSSVFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYCDDIQLEAD-TVLATL 79 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt~~~~~~~~-~~~~ll 79 (705)
|.|||+.|...+..|...- ..||.... ..........++.+ |=++..|..||+|+-+|.+.++.+ .+..++
T Consensus 39 LNVGG~~F~T~~~TL~~~P---~S~L~~~~----~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~ 110 (140)
T 2nz0_B 39 LNVSGRRFQTWRTTLERYP---DTLLGSTE----KEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYD 110 (140)
T ss_dssp EEETTEEEEEEHHHHHTCT---TSTTTSGG----GGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHH
T ss_pred EEECCEEEEeeHHHHhcCC---CeeecccC----CcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHH
Confidence 5799999999999997542 22333210 00011223456666 579999999999999999876654 477899
Q ss_pred HHHhhcCcHHH
Q psy11551 80 YVAKKYIVPHL 90 (705)
Q Consensus 80 ~~A~~~~~~~l 90 (705)
+-|++|+++.+
T Consensus 111 eEa~fy~i~~l 121 (140)
T 2nz0_B 111 DELAFYGILPE 121 (140)
T ss_dssp HHHHHHTCCGG
T ss_pred HHHHHcCCChH
Confidence 99999999886
No 73
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=50.61 E-value=9.9 Score=41.31 Aligned_cols=82 Identities=10% Similarity=-0.041 Sum_probs=56.3
Q ss_pred CeecCeeeehhHHHHhcCCH-HHHHhhcCCCCCccccCCcCCccCeEEcCCCCHHHHHHHHHhHhC-CcccCChh-hHHH
Q psy11551 1 MIRHTQTIPAHKYVLATGSS-VFYAMFYGGTYNLIYYGGLAENKEEIEVPDVEPSAFLTLLKYLYC-DDIQLEAD-TVLA 77 (705)
Q Consensus 1 l~v~g~~~~~Hk~iLaarS~-~F~~~f~~~~~~~~~~~~~~e~~~~i~l~~v~~~~f~~lL~yiYt-~~~~~~~~-~~~~ 77 (705)
|.|||++|...+..|...-. .+..++... ......++++.+ |=++..|..+|+|+.+ |++..+.+ ....
T Consensus 56 lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~-------~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~ 127 (514)
T 2r9r_B 56 INISGLRFETQLKTLAQFPETLLGDPKKRM-------RYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDI 127 (514)
T ss_dssp EEETTEEEEEEHHHHTTSTTSTTTCHHHHG-------GGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHH
T ss_pred EEeCCEEEEecHHHHhcCCCCcccccccCC-------cccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHH
Confidence 47999999999999964311 111112110 012224466666 6799999999999999 99876554 3556
Q ss_pred HHHHHhhcCcHHH
Q psy11551 78 TLYVAKKYIVPHL 90 (705)
Q Consensus 78 ll~~A~~~~~~~l 90 (705)
+++-|++|+++..
T Consensus 128 ~~~E~~f~~i~~~ 140 (514)
T 2r9r_B 128 FSEEIRFYELGEE 140 (514)
T ss_dssp HHHHHHHTTCCHH
T ss_pred HHHHHHhcCCCHH
Confidence 8888999998765
No 74
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=49.13 E-value=11 Score=40.80 Aligned_cols=81 Identities=12% Similarity=0.052 Sum_probs=58.0
Q ss_pred cEEEEeCCCCCceeEeeehhhhhccCHHHHHhhcC------CCCCCcceEEcCCCCHHHHHHHHHhHcc-CCccCChh-h
Q psy11551 243 DVKFVVGSSGHTQTIPAHKYVLATGSSVFYAMFYG------GLAENKEEIEVPDVEPSAFLTLLKYLYC-DDIQLEAD-T 314 (705)
Q Consensus 243 Dv~l~v~~~~~~~~~~aHk~iLaa~S~yF~~mf~~------~~~e~~~~i~l~~v~~~~f~~lL~yiYt-~~~~i~~~-~ 314 (705)
=|++.||| +.|...+..|...- ..++.. ......+++-+ |=++..|+.+|+|+.+ |++..+.+ .
T Consensus 53 ~v~lNVgG----~~f~t~~~tL~~~p---~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~ 124 (514)
T 2r9r_B 53 RVVINISG----LRFETQLKTLAQFP---ETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVP 124 (514)
T ss_dssp EEEEEETT----EEEEEEHHHHTTST---TSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSC
T ss_pred EEEEEeCC----EEEEecHHHHhcCC---CCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCccc
Confidence 47888998 99999999986432 112221 01112256666 6799999999999999 99876554 4
Q ss_pred HHHHHHHHhhcChhHHH
Q psy11551 315 VLATLYVAKKYIVPHLA 331 (705)
Q Consensus 315 v~~ll~~A~~~~l~~L~ 331 (705)
...+..-|++|+++++.
T Consensus 125 ~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 125 LDIFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHhcCCCHHH
Confidence 56689999999998754
No 75
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=49.11 E-value=16 Score=20.48 Aligned_cols=23 Identities=22% Similarity=0.676 Sum_probs=19.2
Q ss_pred HHHHHhhhcCCCchHHHHHHHHH
Q psy11551 558 CLLLSQSRLFEEPDLMQRCWEVI 580 (705)
Q Consensus 558 ~~i~~~A~~~~~~~L~~~c~~~i 580 (705)
|.+.-+|..++.++|.++|++-.
T Consensus 2 ckvmcyaqrhsspellrrcldnc 24 (26)
T 2plx_B 2 CKVMCYAQRHSSPELLRRCLDNC 24 (26)
T ss_dssp HHHHHHHBCCCCHHHHHHHHHHH
T ss_pred ceEEeehhhcCCHHHHHHHHhcc
Confidence 56777899999999999998754
No 76
>3no8_A BTB/POZ domain-containing protein 2; PHR domain, BTBD1, BTBD2, PAM-highwire-RPM-1 domain, toposis regulation, protein structure initiative; 2.20A {Homo sapiens}
Probab=41.54 E-value=5.6 Score=36.06 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=22.8
Q ss_pred CCCCCCCCCCccc--ccccccccCCCCCCC-ccccceeeccchh
Q psy11551 485 PVKARAGLKPQRS--VFFVRLTSLFPFPRY-LYCDDIQLEADTV 525 (705)
Q Consensus 485 ~~~pr~~~~~~~~--~~~~~~~~~~~~~~y-~y~~~~~~~~~~~ 525 (705)
+.+||+++.++.| .||++... .|.| ++++.|.|.++.-
T Consensus 3 ~~~~r~~l~~~~~~v~RFqs~~~---~WgYsg~~DaI~F~Vdr~ 43 (176)
T 3no8_A 3 LDRPRCCLRGKECSINRFQQVES---RWGYSGTSDRIRFSVNKR 43 (176)
T ss_dssp ----------CCEEEECCSEEEE---EECCSSCCEEEEEEESSC
T ss_pred CCccccccCcceeecccccccCC---CCccCCCcceEEEEeCCe
Confidence 4679999999888 99988754 7999 6688999988775
No 77
>2cmy_B Beta trypsin, veronica hederifolia trypsin inhibitor; acyl-enzyme intermediate, serine protease inhibitor, zymogen protease, digestion; 2.25A {Veronica hederifolia} SCOP: g.2.4.1
Probab=30.74 E-value=25 Score=21.02 Aligned_cols=26 Identities=19% Similarity=0.625 Sum_probs=18.3
Q ss_pred HHHHHHhhhcCCCchHHHHHHHHHHH
Q psy11551 557 ACLLLSQSRLFEEPDLMQRCWEVIDA 582 (705)
Q Consensus 557 ~~~i~~~A~~~~~~~L~~~c~~~i~~ 582 (705)
-|.+.-+|..++.++|.++|++-..+
T Consensus 6 qckvmcyaqrhsspellrrcldncek 31 (34)
T 2cmy_B 6 QCKVMCYAQRHSSPELLRRCLDNCEK 31 (34)
T ss_dssp -CHHHHHHBC--CCHHHHHHHHHC--
T ss_pred HhhHHHHHhhcCCHHHHHHHHHhhhh
Confidence 37788899999999999999876544
Done!