Query psy11552
Match_columns 714
No_of_seqs 593 out of 3144
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 21:26:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11552.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11552hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 smart00147 RasGEF Guanine nucl 100.0 1.4E-43 3E-48 366.6 17.7 229 441-712 6-241 (242)
2 KOG2378|consensus 100.0 2.4E-42 5.1E-47 360.5 16.4 232 442-713 339-573 (573)
3 cd00155 RasGEF Guanine nucleot 100.0 1.4E-41 3E-46 350.7 17.8 226 440-708 5-237 (237)
4 KOG3542|consensus 100.0 8.8E-41 1.9E-45 360.0 20.2 262 444-712 872-1148(1283)
5 PF00617 RasGEF: RasGEF domain 100.0 4.8E-35 1E-39 290.9 7.1 180 440-623 4-188 (188)
6 cd04437 DEP_Epac DEP (Dishevel 100.0 1.3E-33 2.8E-38 256.4 11.1 125 44-248 1-125 (125)
7 KOG3629|consensus 100.0 1.7E-29 3.6E-34 268.4 13.9 229 443-713 218-474 (728)
8 cd04440 DEP_2_P-Rex DEP (Dishe 100.0 6.8E-29 1.5E-33 212.8 9.2 92 38-206 2-93 (93)
9 cd04441 DEP_2_DEP6 DEP (Dishev 99.9 9.7E-26 2.1E-30 191.1 7.3 84 43-203 2-85 (85)
10 KOG1113|consensus 99.9 5.7E-25 1.2E-29 226.8 13.9 182 290-488 109-354 (368)
11 cd04442 DEP_1_DEP6 DEP (Dishev 99.9 1.2E-25 2.6E-30 189.7 3.7 80 45-203 2-82 (82)
12 KOG3541|consensus 99.9 5.2E-24 1.1E-28 221.5 10.8 193 479-714 259-463 (477)
13 cd04443 DEP_GPR155 DEP (Dishev 99.9 3.2E-24 7E-29 182.1 6.8 81 46-203 2-83 (83)
14 cd04439 DEP_1_P-Rex DEP (Dishe 99.9 2.5E-23 5.4E-28 176.1 6.4 76 51-203 6-81 (81)
15 KOG0614|consensus 99.9 1.8E-22 4E-27 215.9 10.1 184 288-487 139-391 (732)
16 cd04448 DEP_PIKfyve DEP (Dishe 99.9 4.9E-22 1.1E-26 168.6 6.8 78 48-202 2-80 (81)
17 cd04449 DEP_DEPDC5-like DEP (D 99.8 3.2E-20 6.9E-25 158.9 7.6 79 49-203 5-83 (83)
18 cd04438 DEP_dishevelled DEP (D 99.8 7.2E-20 1.6E-24 156.1 6.8 77 51-204 6-83 (84)
19 cd04446 DEP_DEPDC4 DEP (Dishev 99.8 2.5E-19 5.4E-24 154.7 5.4 75 57-202 11-95 (95)
20 cd04447 DEP_BRCC3 DEP (Disheve 99.7 1.8E-18 3.9E-23 146.8 4.9 78 56-203 12-92 (92)
21 KOG3417|consensus 99.7 2.3E-17 5E-22 198.2 8.4 193 443-639 218-419 (840)
22 PF00610 DEP: Domain found in 99.7 4.3E-17 9.4E-22 137.0 7.1 71 58-203 2-74 (74)
23 cd04444 DEP_PLEK2 DEP (Disheve 99.7 3.2E-17 6.8E-22 144.1 4.3 86 48-210 5-103 (109)
24 smart00049 DEP Domain found in 99.6 4.1E-16 8.9E-21 132.1 6.4 71 57-204 4-76 (77)
25 cd04371 DEP DEP domain, named 99.6 4.4E-15 9.5E-20 127.0 6.9 72 54-202 9-81 (81)
26 cd04450 DEP_RGS7-like DEP (Dis 99.6 6.3E-15 1.4E-19 127.8 7.0 74 56-206 11-85 (88)
27 cd04445 DEP_PLEK1 DEP (Disheve 99.3 2.9E-12 6.2E-17 109.1 5.3 69 135-205 18-97 (99)
28 KOG3417|consensus 99.3 1.7E-11 3.6E-16 147.9 12.5 152 478-635 643-798 (840)
29 KOG0614|consensus 99.1 6.2E-11 1.4E-15 128.2 5.7 94 298-392 267-365 (732)
30 KOG0498|consensus 99.1 6E-10 1.3E-14 128.8 13.7 152 240-392 355-512 (727)
31 KOG0500|consensus 99.0 9.9E-10 2.1E-14 118.7 11.3 140 244-392 256-402 (536)
32 cd04445 DEP_PLEK1 DEP (Disheve 99.0 2.2E-10 4.7E-15 97.8 4.9 63 49-115 6-69 (99)
33 PRK09392 ftrB transcriptional 99.0 2.2E-09 4.8E-14 110.6 10.6 90 302-392 6-98 (236)
34 PLN03192 Voltage-dependent pot 99.0 5E-09 1.1E-13 127.0 14.1 90 302-392 373-465 (823)
35 KOG1113|consensus 98.9 4.8E-10 1E-14 116.9 4.2 92 300-392 237-328 (368)
36 PLN02868 acyl-CoA thioesterase 98.8 2.1E-08 4.6E-13 112.0 11.6 91 299-392 4-97 (413)
37 smart00100 cNMP Cyclic nucleot 98.8 3.4E-08 7.3E-13 88.4 10.4 82 310-392 1-88 (120)
38 cd00038 CAP_ED effector domain 98.7 6.1E-08 1.3E-12 86.3 9.8 82 310-392 1-86 (115)
39 COG0664 Crp cAMP-binding prote 98.7 8.2E-08 1.8E-12 96.1 10.0 86 306-392 3-92 (214)
40 KOG0499|consensus 98.6 3.4E-08 7.4E-13 108.4 5.6 94 298-392 522-620 (815)
41 PRK11753 DNA-binding transcrip 98.6 1.5E-07 3.3E-12 94.9 10.1 80 312-392 6-90 (211)
42 PF00027 cNMP_binding: Cyclic 98.6 7.8E-08 1.7E-12 82.7 6.3 63 330-392 2-68 (91)
43 COG2905 Predicted signal-trans 98.5 2E-07 4.4E-12 102.9 7.9 92 300-392 4-95 (610)
44 PRK11161 fumarate/nitrate redu 98.4 1.1E-06 2.5E-11 90.2 9.2 78 305-382 15-96 (235)
45 PRK10402 DNA-binding transcrip 98.4 5.2E-07 1.1E-11 92.5 6.3 71 321-392 26-100 (226)
46 KOG2968|consensus 98.3 9.4E-07 2E-11 101.4 6.7 111 332-442 391-572 (1158)
47 cd04440 DEP_2_P-Rex DEP (Dishe 98.2 7.7E-07 1.7E-11 77.1 3.3 29 96-124 56-93 (93)
48 cd04436 DEP_fRgd2 DEP (Disheve 98.2 1.6E-06 3.4E-11 73.1 5.0 59 143-203 24-84 (84)
49 PRK13918 CRP/FNR family transc 98.2 3.4E-06 7.5E-11 84.5 8.3 64 328-392 7-76 (202)
50 KOG3572|consensus 98.1 3.5E-06 7.7E-11 99.4 6.1 76 58-209 1286-1363(1701)
51 cd04436 DEP_fRgd2 DEP (Disheve 97.9 1.9E-05 4E-10 66.7 5.7 49 63-115 19-67 (84)
52 TIGR03697 NtcA_cyano global ni 97.9 2.3E-05 4.9E-10 77.8 6.2 51 335-385 1-55 (193)
53 KOG3571|consensus 97.9 1.6E-05 3.4E-10 86.4 5.2 56 57-115 406-461 (626)
54 PRK09391 fixK transcriptional 97.8 5.9E-05 1.3E-09 77.5 8.1 64 326-392 37-104 (230)
55 KOG3542|consensus 97.8 8.1E-05 1.8E-09 83.1 9.3 74 285-359 19-92 (1283)
56 cd04437 DEP_Epac DEP (Dishevel 97.8 2E-05 4.3E-10 72.4 3.4 35 96-130 50-93 (125)
57 cd04441 DEP_2_DEP6 DEP (Dishev 97.7 1.9E-05 4.2E-10 67.5 2.6 26 96-121 51-85 (85)
58 KOG3571|consensus 97.6 2.9E-05 6.3E-10 84.5 3.2 64 143-209 417-480 (626)
59 cd04443 DEP_GPR155 DEP (Dishev 97.6 3E-05 6.6E-10 66.3 2.7 26 96-121 49-83 (83)
60 cd04442 DEP_1_DEP6 DEP (Dishev 97.6 3.1E-05 6.6E-10 65.9 2.6 20 96-115 47-66 (82)
61 cd04439 DEP_1_P-Rex DEP (Dishe 97.6 4.1E-05 9E-10 65.2 2.7 26 96-121 47-81 (81)
62 KOG0501|consensus 97.4 0.00017 3.7E-09 79.7 5.4 88 303-392 548-637 (971)
63 KOG2968|consensus 97.2 0.00014 3E-09 84.2 2.0 66 327-392 508-577 (1158)
64 cd04435 DEP_fRom2 DEP (Disheve 97.2 0.00036 7.8E-09 57.9 3.4 70 132-203 12-82 (82)
65 cd04446 DEP_DEPDC4 DEP (Dishev 97.1 0.00016 3.4E-09 63.2 1.1 28 136-163 15-42 (95)
66 cd04444 DEP_PLEK2 DEP (Disheve 97.0 0.00032 6.8E-09 62.5 1.9 23 138-160 21-43 (109)
67 cd04448 DEP_PIKfyve DEP (Dishe 97.0 0.0004 8.8E-09 59.2 2.1 20 96-115 47-66 (81)
68 cd04447 DEP_BRCC3 DEP (Disheve 96.9 0.00031 6.8E-09 60.4 1.1 53 136-188 17-70 (92)
69 cd04449 DEP_DEPDC5-like DEP (D 96.9 0.00057 1.2E-08 58.6 2.7 20 96-115 49-68 (83)
70 cd04438 DEP_dishevelled DEP (D 96.9 0.00061 1.3E-08 58.5 2.7 26 96-121 49-82 (84)
71 PRK11753 DNA-binding transcrip 96.9 0.0047 1E-07 62.1 9.3 75 393-482 31-110 (211)
72 COG0664 Crp cAMP-binding prote 96.8 0.0042 9E-08 61.9 8.4 71 393-478 34-108 (214)
73 PRK09392 ftrB transcriptional 96.8 0.0048 1E-07 63.4 8.9 74 393-481 41-117 (236)
74 PF00027 cNMP_binding: Cyclic 96.8 0.0012 2.6E-08 56.3 3.5 71 393-478 10-84 (91)
75 PRK10402 DNA-binding transcrip 96.7 0.0047 1E-07 63.2 8.1 74 393-481 42-119 (226)
76 TIGR03697 NtcA_cyano global ni 96.7 0.0072 1.6E-07 59.8 9.0 145 393-552 4-167 (193)
77 PF00610 DEP: Domain found in 96.7 0.0014 3E-08 54.8 3.0 21 95-115 37-57 (74)
78 PRK13918 CRP/FNR family transc 96.5 0.018 3.8E-07 57.6 10.4 139 393-551 17-172 (202)
79 PRK11161 fumarate/nitrate redu 96.2 0.028 6E-07 57.7 10.1 141 393-553 48-209 (235)
80 PRK09391 fixK transcriptional 96.1 0.034 7.3E-07 57.1 10.3 142 393-554 49-205 (230)
81 smart00049 DEP Domain found in 95.9 0.0069 1.5E-07 51.0 3.0 21 96-116 39-59 (77)
82 cd00038 CAP_ED effector domain 95.8 0.016 3.5E-07 50.9 5.2 71 393-478 28-102 (115)
83 cd04435 DEP_fRom2 DEP (Disheve 95.5 0.024 5.2E-07 47.3 4.8 71 43-123 4-74 (82)
84 PLN03192 Voltage-dependent pot 95.5 0.012 2.5E-07 72.0 4.2 71 393-478 408-481 (823)
85 cd04450 DEP_RGS7-like DEP (Dis 95.4 0.011 2.3E-07 51.4 2.6 20 96-115 47-66 (88)
86 cd04371 DEP DEP domain, named 95.4 0.007 1.5E-07 51.3 1.4 21 140-160 20-40 (81)
87 smart00100 cNMP Cyclic nucleot 95.1 0.028 6E-07 49.6 4.3 45 393-437 28-76 (120)
88 KOG0498|consensus 94.6 0.026 5.6E-07 66.5 3.5 50 393-442 453-507 (727)
89 KOG0499|consensus 94.0 0.044 9.5E-07 61.6 3.6 70 393-477 561-635 (815)
90 KOG0500|consensus 94.0 0.049 1.1E-06 60.2 3.8 46 393-438 341-387 (536)
91 PLN02868 acyl-CoA thioesterase 93.0 0.13 2.8E-06 57.8 5.3 48 393-442 42-92 (413)
92 COG2905 Predicted signal-trans 92.1 0.15 3.3E-06 57.5 4.3 84 393-491 41-124 (610)
93 KOG2378|consensus 90.5 0.062 1.4E-06 58.6 -0.7 47 371-417 1-81 (573)
94 KOG0501|consensus 88.3 0.31 6.7E-06 54.9 2.6 71 367-438 556-626 (971)
95 TIGR00869 sec62 protein transl 82.7 2.5 5.3E-05 43.2 5.7 58 149-207 22-114 (232)
96 PF04831 Popeye: Popeye protei 81.3 13 0.00029 35.4 9.6 64 313-377 14-78 (153)
97 PF07883 Cupin_2: Cupin domain 79.2 2.7 5.9E-05 33.9 3.9 44 330-375 3-47 (71)
98 PRK11832 putative DNA-binding 71.7 21 0.00045 36.1 8.6 52 327-379 22-75 (207)
99 TIGR00869 sec62 protein transl 68.2 4.4 9.4E-05 41.5 3.0 44 74-117 20-74 (232)
100 PF05899 Cupin_3: Protein of u 64.3 11 0.00023 31.4 4.2 40 333-375 15-54 (74)
101 COG1917 Uncharacterized conser 60.2 18 0.00038 33.4 5.3 51 327-379 45-96 (131)
102 PRK13290 ectC L-ectoine syntha 60.0 20 0.00043 33.2 5.5 49 327-376 37-86 (125)
103 COG5422 ROM1 RhoGEF, Guanine n 58.8 2.2 4.8E-05 50.5 -1.2 63 43-115 280-342 (1175)
104 TIGR03037 anthran_nbaC 3-hydro 40.9 41 0.00088 32.5 4.4 46 339-385 43-90 (159)
105 COG0662 {ManC} Mannose-6-phosp 40.7 65 0.0014 29.7 5.7 44 330-375 41-85 (127)
106 smart00835 Cupin_1 Cupin. This 39.9 56 0.0012 30.8 5.3 50 327-376 32-86 (146)
107 PRK09943 DNA-binding transcrip 39.5 59 0.0013 31.9 5.6 43 331-375 113-156 (185)
108 PRK11171 hypothetical protein; 38.7 55 0.0012 34.4 5.5 47 327-375 63-111 (266)
109 PRK13264 3-hydroxyanthranilate 37.1 48 0.001 32.6 4.3 37 343-379 52-90 (177)
110 PRK11171 hypothetical protein; 34.7 84 0.0018 33.0 6.1 48 326-375 185-233 (266)
111 TIGR03214 ura-cupin putative a 34.7 64 0.0014 33.8 5.2 47 327-375 60-108 (260)
112 COG3837 Uncharacterized conser 34.0 51 0.0011 31.7 3.8 46 331-378 48-95 (161)
113 PF11699 CENP-C_C: Mif2/CENP-C 30.5 61 0.0013 27.9 3.4 29 345-375 33-61 (85)
114 PF09868 DUF2095: Uncharacteri 28.4 68 0.0015 29.1 3.4 36 146-184 72-110 (128)
115 PF04831 Popeye: Popeye protei 25.5 1.5E+02 0.0032 28.5 5.3 70 398-478 45-114 (153)
116 TIGR03404 bicupin_oxalic bicup 23.8 1.6E+02 0.0036 32.5 6.2 48 328-375 70-120 (367)
117 PHA00672 hypothetical protein 23.2 1.3E+02 0.0028 27.7 4.3 36 327-363 49-84 (152)
118 PF01050 MannoseP_isomer: Mann 23.2 1.8E+02 0.0039 27.9 5.6 46 327-374 65-111 (151)
119 PF10037 MRP-S27: Mitochondria 22.2 1.2E+02 0.0025 34.3 4.7 67 116-187 87-172 (429)
120 KOG3572|consensus 22.2 74 0.0016 40.1 3.2 47 79-130 1309-1366(1701)
121 COG3450 Predicted enzyme of th 21.1 1.4E+02 0.0031 27.3 4.2 29 346-375 64-92 (116)
122 TIGR03404 bicupin_oxalic bicup 20.9 2.1E+02 0.0045 31.7 6.3 49 327-375 247-299 (367)
No 1
>smart00147 RasGEF Guanine nucleotide exchange factor for Ras-like small GTPases.
Probab=100.00 E-value=1.4e-43 Score=366.59 Aligned_cols=229 Identities=38% Similarity=0.655 Sum_probs=209.5
Q ss_pred hhHHHHHHh--hhheeeeeccccccCCceeeeecCCccccccc-hhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHHH
Q psy11552 441 SYQLHMYLE--QMAVYFTTTAPDIKGPRRYKFRGPNRFQQITA-NLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRKM 517 (714)
Q Consensus 441 ~~~~~~~l~--~~~ly~~itv~ei~~p~~~~~l~r~~f~~~tp-nI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~f 517 (714)
+.++|+||| ++++|+.+++.|+ +...|++......+| ++..++++||.++.||+++|+.++++++|++++++|
T Consensus 6 ~~eiA~QlTl~d~~~f~~I~~~El----~~~~~~~~~~~~~~p~~i~~~~~~~n~is~wv~~~Il~~~~~~~R~~~i~~f 81 (242)
T smart00147 6 PKELAEQLTLLDFELFRKIDPSEL----LGSVWGKRSKKSPSPLNLERFIERFNEVSNWVATEILKQTTPKDRAELLSKF 81 (242)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHH----HHHHHcCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 446899998 5579999999997 444566666666677 999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHhCC-CCccccccc
Q psy11552 518 IKLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSKLQ-SPVIPFMPL 596 (714)
Q Consensus 518 I~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~~~-~p~IPflg~ 596 (714)
|+||.+|.++||||+++||++||++++|.||+.||+.++++.++.|++|+.++++.+||+.||+++.+.. +|||||+|+
T Consensus 82 I~ia~~l~~l~Nfns~~aI~~~L~~~~I~RL~~tw~~l~~~~~~~~~~L~~l~s~~~n~~~yR~~l~~~~~~p~IP~lg~ 161 (242)
T smart00147 82 IQVAKHCRELNNFNSLMAIVSALSSSPISRLKKTWEKLPSKYKKLFEELEELLSPERNFKNYREALSSCNLPPCVPFLGV 161 (242)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHhCChHHhhhHHHHHHCCHHHHHHHHHHHHHcCChhHHHHHHHHHHhcCCCCCccchHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 999999999
Q ss_pred hhhchhccccCCCCcc-CCcccHHHHHHHHHHHHHHhhhhcccCCCCccccccchhhHHHHHHHHHHHHHHHHhhcCCCC
Q psy11552 597 LLKDLAFTHDGNKTVV-DGLVNFEKMHMFAQTLRTLRYCRTRHLDHDKTVVDGLVNFEKMHMFAQTLRTLRYCRTRHLVL 675 (714)
Q Consensus 597 ~L~Dl~~i~egn~~~~-~glINf~K~~~i~~ii~~i~~~q~~~~~~~~~~~~~l~nf~k~~~~~~~i~~i~~~q~~~~~~ 675 (714)
+|+|++++++|+|++. +|+|||.|++++ ++.+..+..||+.+|++
T Consensus 162 ~l~dl~~~~~~~~~~~~~~~iNf~k~~~i----------------------------------~~~i~~~~~~Q~~~y~~ 207 (242)
T smart00147 162 LLKDLTFIDEGNPDFLENGLVNFEKRRKI----------------------------------AEILREIRQLQSQPYNL 207 (242)
T ss_pred HHHHHHHHHccCcccccCCcccHHHHHHH----------------------------------HHHHHHHHHHhcCCCCC
Confidence 9999999999999998 799999999999 55555566677778888
Q ss_pred CCCCCCCh-HHHHHHHhhC-CCCCCHHHHHHHHhhcCCC
Q psy11552 676 DPPTPKCE-SEVKSYVSCL-RAMDNQRILTSMSQKLEPR 712 (714)
Q Consensus 676 ~~~~~~~~-~~i~~yi~~~-~~~~~~~~L~~lS~~lEPr 712 (714)
.+ . +++|.|+.++ ..+++++.+|++|+++|||
T Consensus 208 ~~-----~~~~iq~~l~~~~~~~~~~~~~~~~S~~~EP~ 241 (242)
T smart00147 208 RP-----NRSDIQSLLQQLLDHLDEEEELYQLSLKIEPR 241 (242)
T ss_pred CC-----CcHHHHHHHHHHHhhcCCHHHHHHHHHHhCCC
Confidence 77 6 8999999997 6777788999999999998
No 2
>KOG2378|consensus
Probab=100.00 E-value=2.4e-42 Score=360.46 Aligned_cols=232 Identities=55% Similarity=0.849 Sum_probs=218.1
Q ss_pred hHHHHHHh--hhheeeeeccccccCCceeeeecCCc-cccccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHHHH
Q psy11552 442 YQLHMYLE--QMAVYFTTTAPDIKGPRRYKFRGPNR-FQQITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRKMI 518 (714)
Q Consensus 442 ~~~~~~l~--~~~ly~~itv~ei~~p~~~~~l~r~~-f~~~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~fI 518 (714)
..+|.+|+ ++.+|.++.-.|+ ++++++++. ....+.|++.+.++||+++.||+++|+.++.+.+|++++++||
T Consensus 339 ~dlA~qLt~fdw~Lfnsih~~El----I~y~i~~q~~~~~~tanleLl~~R~neVq~wv~tei~lc~ql~kr~qllkkfi 414 (573)
T KOG2378|consen 339 KDLAHQLTLFDWSLFNSIHENEL----IHYVIGGQIPCDRNTANLELLLRRFNEVQHWVATEILLCQQLGKRCQLLKKFI 414 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhHhHh----hHhhhcccCCCCccchhHHHHHHHHhhchhhhhchhhhhcchhHHHHHHHHHH
Confidence 34788888 5579999999997 888998554 4578899999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHhCCCCccccccchh
Q psy11552 519 KLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSKLQSPVIPFMPLLL 598 (714)
Q Consensus 519 ~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~~~~p~IPflg~~L 598 (714)
++|..|++.+|.++++||++||++.+|+||..||+++|.+.++.|.+++++++|..|++.||.+.++.+||.|||+++.|
T Consensus 415 Kiaal~ke~~~l~sffAV~~GL~~~avSrl~~tweklP~k~kk~~s~~enl~dP~~nhr~yR~l~~km~pp~ipf~Plll 494 (573)
T KOG2378|consen 415 KIAALCKEGENLNSFFAVVMGLSNRAVSRLDLTWEKLPYKFKKLFSELENLLDPCRNHRTYRLLSSKMSPPYIPFMPLLL 494 (573)
T ss_pred HHHHHHHhhccccchHHHhhcchhHHHHhhhcccccCchHHHhHHHHHHhcCCchhhhHHHHHHHHhcCCCCCCccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhccccCCCCccCCcccHHHHHHHHHHHHHHhhhhcccCCCCccccccchhhHHHHHHHHHHHHHHHHhhcCCCCCCC
Q psy11552 599 KDLAFTHDGNKTVVDGLVNFEKMHMFAQTLRTLRYCRTRHLDHDKTVVDGLVNFEKMHMFAQTLRTLRYCRTRHLVLDPP 678 (714)
Q Consensus 599 ~Dl~~i~egn~~~~~glINf~K~~~i~~ii~~i~~~q~~~~~~~~~~~~~l~nf~k~~~~~~~i~~i~~~q~~~~~~~~~ 678 (714)
+|++|+++||++|++|+|||+||+|+ |++.+++++|+++|++...
T Consensus 495 kD~tf~heGnkt~v~glVNfEKmhmi----------------------------------A~~~Rt~r~cRS~p~~~~a- 539 (573)
T KOG2378|consen 495 KDLTFIHEGNKTFVDGLVNFEKMHMI----------------------------------AKTARTLRHCRSQPLNPGA- 539 (573)
T ss_pred hhceeeccchHHHHhcchhHHHHHHH----------------------------------HHHHHHHHHHhcCCCCCCC-
Confidence 99999999999999999999999999 8888889999999888643
Q ss_pred CCCChHHHHHHHhhCCCCCCHHHHHHHHhhcCCCC
Q psy11552 679 TPKCESEVKSYVSCLRAMDNQRILTSMSQKLEPRR 713 (714)
Q Consensus 679 ~~~~~~~i~~yi~~~~~~~~~~~L~~lS~~lEPr~ 713 (714)
++.+.+.++|++++.+||||+.|++||+++|||.
T Consensus 540 -~~~h~e~rSyVrql~VIDnQ~~L~qLS~~lEpr~ 573 (573)
T KOG2378|consen 540 -PHEHQETRSYVRQLRVIDNQRKLSQLSYELEPRS 573 (573)
T ss_pred -cccchhHHHHHhhHeeeccHHHHHHHhhhcCCCC
Confidence 4568899999999999999999999999999984
No 3
>cd00155 RasGEF Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. Guanine-nucleotide-exchange factors (GEFs) positively regulate these GTP-binding proteins in response to a variety of signals. GEFs catalyze the dissociation of GDP from the inactive GTP-binding proteins. GTP can then bind and induce structural changes that allow interaction with effectors.
Probab=100.00 E-value=1.4e-41 Score=350.65 Aligned_cols=226 Identities=33% Similarity=0.589 Sum_probs=203.7
Q ss_pred chhHHHHHHh--hhheeeeeccccccCCceeeeecCCccc-cccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHH
Q psy11552 440 PSYQLHMYLE--QMAVYFTTTAPDIKGPRRYKFRGPNRFQ-QITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRK 516 (714)
Q Consensus 440 p~~~~~~~l~--~~~ly~~itv~ei~~p~~~~~l~r~~f~-~~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~ 516 (714)
++.++|+||| ++++|..+++.|+ +...|++.... +.+|++..++++||.++.||+++|+.++++++|++++++
T Consensus 5 d~~eiA~QlTl~~~~lf~~I~~~El----~~~~~~~~~~~~~~~p~i~~~~~~~n~ls~wv~~~Il~~~~~~~R~~~i~~ 80 (237)
T cd00155 5 DPKELAEQLTLLDFELFRKIEPFEL----LGSLWSKKDKNIHLSPNLERFIERFNNLSNWVASEILLCTNPKKRARLLSK 80 (237)
T ss_pred CHHHHHHHHHHHHHHHHhCCCHHHH----HHHHHCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3446899998 5579999999996 33445554443 379999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHhC--CCCccccc
Q psy11552 517 MIKLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSKL--QSPVIPFM 594 (714)
Q Consensus 517 fI~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~~--~~p~IPfl 594 (714)
||+||.+|.++||||+++||++||++++|.||++||+.++++.++.|++|..++++++||+.||+.+.+. ++|||||+
T Consensus 81 ~I~ia~~l~~l~Nfns~~aI~~~L~~~~I~RL~~tw~~l~~~~~~~~~~l~~l~~~~~n~~~yr~~l~~~~~~~p~IP~l 160 (237)
T cd00155 81 FIQVAKHCRELNNFNSLMAIVSALSSSPISRLKKTWEVLSSKLKKLFEELEELVDPSRNFKNYRKLLKSVGPNPPCVPFL 160 (237)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHhCCccchhHHHHHHHCCHHHHHHHHHHHHHhCcHhhHHHHHHHHHhcCCCCCCeeeh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 89999999
Q ss_pred cchhhchhccccCCCCccC-CcccHHHHHHHHHHHHHHhhhhcccCCCCccccccchhhHHHHHHHHHHHHHHHHhhcCC
Q psy11552 595 PLLLKDLAFTHDGNKTVVD-GLVNFEKMHMFAQTLRTLRYCRTRHLDHDKTVVDGLVNFEKMHMFAQTLRTLRYCRTRHL 673 (714)
Q Consensus 595 g~~L~Dl~~i~egn~~~~~-glINf~K~~~i~~ii~~i~~~q~~~~~~~~~~~~~l~nf~k~~~~~~~i~~i~~~q~~~~ 673 (714)
|++|+||+++++|+|++.+ |+|||.|++++ ++.+..+..||+.+|
T Consensus 161 g~~l~dl~~~~e~~~~~~~~~~iN~~K~~~i----------------------------------~~~i~~~~~~Q~~~Y 206 (237)
T cd00155 161 GVYLKDLTFLHEGNPDFLEGNLVNFEKRRKI----------------------------------AEILREIRQLQSNSY 206 (237)
T ss_pred hHHHHHHHHHHccCCccCcCCCccHHHHHHH----------------------------------HHHHHHHHHHhhCCC
Confidence 9999999999999999997 99999999999 455555556667788
Q ss_pred CCCCCCCCChHHHHHHHhhCC-CCCCHHHHHHHHhh
Q psy11552 674 VLDPPTPKCESEVKSYVSCLR-AMDNQRILTSMSQK 708 (714)
Q Consensus 674 ~~~~~~~~~~~~i~~yi~~~~-~~~~~~~L~~lS~~ 708 (714)
++.| .++++.|+.+++ +..|++.||++|++
T Consensus 207 ~~~~-----~~~iq~~l~~~~~~~~~~~~l~~~Sl~ 237 (237)
T cd00155 207 ELNR-----DEDILAFLWKLLELILNEDELYELSLE 237 (237)
T ss_pred CCCC-----cHHHHHHHHhccccCCCHHHHHHHhcC
Confidence 8877 889999999998 56679999999974
No 4
>KOG3542|consensus
Probab=100.00 E-value=8.8e-41 Score=360.01 Aligned_cols=262 Identities=32% Similarity=0.568 Sum_probs=207.9
Q ss_pred HHHHH--hhhheeeeeccccccCCceeeeecCCccccccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHHHHHHH
Q psy11552 444 LHMYL--EQMAVYFTTTAPDIKGPRRYKFRGPNRFQQITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRKMIKLA 521 (714)
Q Consensus 444 ~~~~l--~~~~ly~~itv~ei~~p~~~~~l~r~~f~~~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~fI~iA 521 (714)
+|.|| +.+.+|.++.+.|.... +=+-+...-++++..|-+-||.-++||+++||.+.+.-+|+++|++||+||
T Consensus 872 VAtQLsmrdF~lFrnIEPTEyiDd-----LFKL~SKtg~~~LkrFE~l~NqEtfWVAsEIltE~nqlKRmKiIKhFIKiA 946 (1283)
T KOG3542|consen 872 VATQLSMRDFSLFRNIEPTEYIDD-----LFKLDSKTGSPKLKRFEQLFNQETFWVASEILTERNQLKRMKIIKHFIKIA 946 (1283)
T ss_pred HHHHhhhhhhhhHhcCChHHHHHH-----HHhhccccCCccHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444 37789999888885221 112233456789999999999999999999999999999999999999999
Q ss_pred HHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHh--CCCCccccccchhh
Q psy11552 522 AYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSK--LQSPVIPFMPLLLK 599 (714)
Q Consensus 522 ~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~--~~~p~IPflg~~L~ 599 (714)
.+|++++|||+++||++||+-++|.||+-||+++|+|+.+.|++|+++++|++|...||+.+.+ .+||.||.++++-+
T Consensus 947 lhCReckNFNSMFAIiSGLnla~VaRLr~tWEklpsKYek~lqdlqdlfDPSRNMaKYRn~L~sq~~qPPiiPlfPViKK 1026 (1283)
T KOG3542|consen 947 LHCRECKNFNSMFAIISGLNLAAVARLRSTWEKLPSKYEKMLQDLQDLFDPSRNMAKYRNHLASQAQQPPIIPLFPVIKK 1026 (1283)
T ss_pred HHHHHhcchhhHHHHHhcCchHHHHHHhhhHhhccHHHHHHHHHHHHhhCchhhHHHHHHHHHhhccCCCccccchheec
Confidence 9999999999999999999999999999999999999999999999999999999999999986 48999999999999
Q ss_pred chhccccCCCCccCCcccHHHHHHHHHHHHHHhhhhcccCCCCc-------cccccchhhHHHH--HHHHHHHHHHHHhh
Q psy11552 600 DLAFTHDGNKTVVDGLVNFEKMHMFAQTLRTLRYCRTRHLDHDK-------TVVDGLVNFEKMH--MFAQTLRTLRYCRT 670 (714)
Q Consensus 600 Dl~~i~egn~~~~~glINf~K~~~i~~ii~~i~~~q~~~~~~~~-------~~~~~l~nf~k~~--~~~~~i~~i~~~q~ 670 (714)
||||+||||.++.||+|||+|+|+|++-|+.+.+.-+.++++.. .+.+++.|-.... +-+..-+.++. +
T Consensus 1027 DlTFlHeGNdskvdgLvNFEKLRmIaKeIR~V~rmsSanmdpA~Mfr~r~gslsqgstn~n~ldvsq~g~hkKr~rr--s 1104 (1283)
T KOG3542|consen 1027 DLTFLHEGNDSKVDGLVNFEKLRMIAKEIRGVMRMSSANMDPASMFRRRGGSLSQGSTNMNSLDVSQVGTHKKRMRR--S 1104 (1283)
T ss_pred cceeeecCCchhhhccccHHHHHHHHHHHHHHHhhccCCCCHHHHHHhcCCcccccccccceeecccchhhhhhccc--c
Confidence 99999999999999999999999999999999998888887742 1112222211000 00000000000 0
Q ss_pred cCCCCCC--CCCCChHHHHHHHhhCCCCCCHHHHHHHHhhcCCC
Q psy11552 671 RHLVLDP--PTPKCESEVKSYVSCLRAMDNQRILTSMSQKLEPR 712 (714)
Q Consensus 671 ~~~~~~~--~~~~~~~~i~~yi~~~~~~~~~~~L~~lS~~lEPr 712 (714)
+..+-.. ....+...+++|+.++.+-+|+++|--+|+++||.
T Consensus 1105 s~lnaKKlYEdAqMaRKVKqYLs~L~ve~dEe~lq~mSlq~EPa 1148 (1283)
T KOG3542|consen 1105 SNLNAKKLYEDAQMARKVKQYLSGLHVEDDEEELQSMSLQIEPA 1148 (1283)
T ss_pred ccccHHHHHHHHHHHHHHHHHhccCcccccHHHHhhhheecchh
Confidence 0000000 00123567999999999999999999999999995
No 5
>PF00617 RasGEF: RasGEF domain; InterPro: IPR001895 Ras proteins are membrane-associated molecular switches that bind GTP and GDP and slowly hydrolyze GTP to GDP []. The balance between the GTP bound (active) and GDP bound (inactive) states is regulated by the opposite action of proteins activating the GTPase activity and that of proteins which promote the loss of bound GDP and the uptake of fresh GTP [, ]. The latter proteins are known as guanine-nucleotide dissociation stimulators (GDSs) (or also as guanine-nucleotide releasing (or exchange) factors (GRFs)). Proteins that act as GDS can be classified into at least two families, on the basis of sequence similarities, the CDC24 family (see IPR001331 from INTERPRO) and the CDC25 family. The size of the proteins of the CDC25 family range from 309 residues (LTE1) to 1596 residues (sos). The sequence similarity shared by all these proteins is limited to a region of about 250 amino acids generally located in their C-terminal section (currently the only exceptions are sos and ralGDS where this domain makes up the central part of the protein). This domain has been shown, in CDC25 an SCD25, to be essential for the activity of these proteins.; GO: 0005085 guanyl-nucleotide exchange factor activity, 0007264 small GTPase mediated signal transduction, 0005622 intracellular; PDB: 2IJE_S 3T6G_A 1NVW_S 1BKD_S 1XDV_A 2II0_A 1NVU_S 1NVX_S 1NVV_S 1XD4_B ....
Probab=100.00 E-value=4.8e-35 Score=290.94 Aligned_cols=180 Identities=34% Similarity=0.617 Sum_probs=161.6
Q ss_pred chhHHHHHHh--hhheeeeeccccccCCceeeeecCCcccc-ccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHH
Q psy11552 440 PSYQLHMYLE--QMAVYFTTTAPDIKGPRRYKFRGPNRFQQ-ITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRK 516 (714)
Q Consensus 440 p~~~~~~~l~--~~~ly~~itv~ei~~p~~~~~l~r~~f~~-~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~ 516 (714)
++.++|+||| +.++|..+++.|+ +...|....... .+|++..++++||.++.||+.+||.++++++|++++++
T Consensus 4 ~~~~iA~qlt~~~~~lf~~I~~~e~----~~~~~~~~~~~~~~~~~i~~~~~~~n~ls~wv~~~Il~~~~~~~R~~~i~~ 79 (188)
T PF00617_consen 4 DPEEIARQLTLLDSELFRKIKPSEL----LYSVWSKSDKKENQSPNINKLIDRFNKLSNWVISEILSQPDPEERAKIIEK 79 (188)
T ss_dssp -HHHHHHHHHHHHHHHHHTSSHHHH----HGGGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCCHHHH----HHHHhcCCCCCCccChhHHHHHHHhhhHHHHHHHHhhccccHHHHHHHHHH
Confidence 3456899998 5579999999997 444555544333 58999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHhCCC-Ccccccc
Q psy11552 517 MIKLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSKLQS-PVIPFMP 595 (714)
Q Consensus 517 fI~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~~~~-p~IPflg 595 (714)
||+||.+|.++|||++++||++||++++|.||++||+.++++.++.|++|+.++++++||+.||.++.+.++ |||||||
T Consensus 80 ~I~va~~l~~l~Nf~s~~aI~~~L~s~~i~rL~~tw~~l~~~~~~~~~~l~~l~~~~~~~~~yr~~~~~~~~~~~IP~lg 159 (188)
T PF00617_consen 80 FIQVAKKLYELGNFNSLMAILSALNSSSIQRLKKTWKSLSKKSKKTFEELESLFSPSNNYKNYREALKKCNPQPCIPFLG 159 (188)
T ss_dssp HHHHHHHHHHTTBHHHHHHHHHHHTSHHHHT-HHHHHTSHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTSTSSSSB--HH
T ss_pred HHhHHHHHHHhcCchHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHhhcccchhhHHHHHhhcccccCceecccH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887 9999999
Q ss_pred chhhchhccccCCCCccCC-cccHHHHHH
Q psy11552 596 LLLKDLAFTHDGNKTVVDG-LVNFEKMHM 623 (714)
Q Consensus 596 ~~L~Dl~~i~egn~~~~~g-lINf~K~~~ 623 (714)
++++|++++++|+|+++++ +|||+|+|+
T Consensus 160 ~~l~dl~~~~~~~~~~~~~~liN~~K~r~ 188 (188)
T PF00617_consen 160 IFLKDLIFIEEGNPDFIDDGLINFEKCRK 188 (188)
T ss_dssp HHHHHHHHHHHHS-SECTTTCEEHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCccCCcccccC
Confidence 9999999999999999976 999999985
No 6
>cd04437 DEP_Epac DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in Epac-like proteins. Epac (exchange proteins directly activated by cAMP) proteins are GEFs (guanine-nucleotide-exchange factors) for the small GTPases, Rap1 and Rap2. They are directly regulated by cyclic AMP, a second messenger that plays a role in the control of diverse cellular processes, such as cell adhesion and insulin secretion. Epac-like proteins share a common domain architecture, containing RasGEF, DEP and CAP-effector (cAMP binding) domains. The DEP domain is involved in membrane localization.
Probab=100.00 E-value=1.3e-33 Score=256.44 Aligned_cols=125 Identities=46% Similarity=0.743 Sum_probs=117.7
Q ss_pred HHHHHHHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeec
Q psy11552 44 AGWVLRTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFS 123 (714)
Q Consensus 44 ~~~~l~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~ 123 (714)
+|++||+.++.+++.+||||+|++ ++|++||+|+||||||++++.+
T Consensus 1 aG~~l~~~~~~~~~~~ikdR~~~~--~~y~~cF~GsElVdWLl~~~~~-------------------------------- 46 (125)
T cd04437 1 AGRALRNAILSDAPHLIRDRKYHL--RTYRQCCVGTELVDWLLQQSPC-------------------------------- 46 (125)
T ss_pred CcHHHHHHHHccCcccceeeeECC--EECCcccccHHHHHHHHHcCCC--------------------------------
Confidence 589999999999999999999999 9999999999999999999986
Q ss_pred CCCCchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceeee
Q psy11552 124 ETETIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYNF 203 (714)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yrf 203 (714)
+.+|+|||.+||+|++.|+|+||.++|.|+|+++||||
T Consensus 47 ------------------------------------------v~sR~eAv~lgq~Ll~~gvi~HV~~~h~F~D~~~fYrF 84 (125)
T cd04437 47 ------------------------------------------VQSRSQAVGMWQVLLEEGVLLHVDQELHFQDKYQFYRF 84 (125)
T ss_pred ------------------------------------------CCCHHHHHHHHHHHHhCCCeEEeCCcCccccCCeeEEE
Confidence 68999999999999999999999999999999999999
Q ss_pred ccCccCCCCCCchhhhHHHHHHHHHHHHHHHhhCChHHHHHHHHH
Q psy11552 204 WQDKEGSSSQATAQDIAEAEEHLEEALLALARRAPDAILRYILRK 248 (714)
Q Consensus 204 ~~d~~~~~~~~~~~~~~~~ee~l~e~l~~l~q~~~~~~~r~ilr~ 248 (714)
..|++...++. .++.+|+|+++|.+|+|++|++++||+++|
T Consensus 85 ~~d~~~~~~~~----~~~~eee~~~~v~~l~q~~p~~~~~~~~~k 125 (125)
T cd04437 85 SDDECSPAPLE----KREAEEELQEAVTLLSQLGPDALLRMILRK 125 (125)
T ss_pred CCccCCcccch----hhhhHHHHHHHHHHHHhhCcHHHHHHhccC
Confidence 99998776653 478899999999999999999999999875
No 7
>KOG3629|consensus
Probab=99.96 E-value=1.7e-29 Score=268.37 Aligned_cols=229 Identities=22% Similarity=0.359 Sum_probs=203.1
Q ss_pred HHHHHHhhh--heeeeeccccccCCceeeeecCC-ccccccchhhhhhhhhhhHHHhHhhhhcccc-ChhhHHHHHHHHH
Q psy11552 443 QLHMYLEQM--AVYFTTTAPDIKGPRRYKFRGPN-RFQQITANLDVFLRRFNEIQYWVITEILLVT-SLNKRVQILRKMI 518 (714)
Q Consensus 443 ~~~~~l~~~--~ly~~itv~ei~~p~~~~~l~r~-~f~~~tpnI~~~i~~fn~ls~wV~~~Il~~~-~~~~R~~~i~~fI 518 (714)
.+|.|||.+ .+|...-+..|+|.. |++. ...+.+|.+.+.+.+||.|+.-|+++||..+ .+..||++|+|||
T Consensus 218 ~iAEQLT~~DA~LFk~l~phqClGcv----Ws~Rd~~ghl~ptvrATi~QFN~vs~~Vvssilg~~lrp~qRAkiieKWI 293 (728)
T KOG3629|consen 218 QIAEQLTFWDAALFKELLPHQCLGCV----WSKRDTAGHLVPTVRATIEQFNSVSQRVVSSILGPDLRPEQRAKIIEKWI 293 (728)
T ss_pred HHHHHHHHHHHHHHHHhhhHhcccce----eccCCCcccccchHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHH
Confidence 488999977 499988888886644 4444 4458999999999999999999999999975 5689999999999
Q ss_pred HHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHhC------------
Q psy11552 519 KLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSKL------------ 586 (714)
Q Consensus 519 ~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~~------------ 586 (714)
+||.+|+-++||.++.||+++|++.+|+|||.+|..++......|++|.++++.++|+..-|+++-+.
T Consensus 294 ~iA~E~rllknfssl~avvsalqs~pihrlk~aw~~v~rdsls~f~els~ifse~~n~~~sReLL~qeGtsksspLe~s~ 373 (728)
T KOG3629|consen 294 DIARECRLLKNFSSLKAVVSALQSEPIHRLKSAWNSVPRDSISQFRELSSIFSEDGNQGNSRELLIQEGTSKSSPLEASP 373 (728)
T ss_pred HHHHHHHHHhhhccceeeeccccccHHHHHHhhhccCchhHHHHHHHHHhhcccccCCcchhHHHHHhcccccCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999999999999877641
Q ss_pred -----------CCCccccccchhhchhccccCCCCcc-CCcccHHHHHHHHHHHHHHhhhhcccCCCCccccccchhhHH
Q psy11552 587 -----------QSPVIPFMPLLLKDLAFTHDGNKTVV-DGLVNFEKMHMFAQTLRTLRYCRTRHLDHDKTVVDGLVNFEK 654 (714)
Q Consensus 587 -----------~~p~IPflg~~L~Dl~~i~egn~~~~-~glINf~K~~~i~~ii~~i~~~q~~~~~~~~~~~~~l~nf~k 654 (714)
....|||||.||+||+++++..+++. +|+|||+|.|+..+++.+++.+|+.
T Consensus 374 k~a~~r~qr~~~qGtVPyLGtFLtDLvMlDtA~~d~~e~glINFeKRRkEFeVla~lrllQsa----------------- 436 (728)
T KOG3629|consen 374 KRAHARWQRQDKQGTVPYLGTFLTDLVMLDTAMNDYPEEGLINFEKRRKEFEVLAKLRLLQSA----------------- 436 (728)
T ss_pred hhhhhhhhhccCCcccchHHHHHHHHHHHhhcccCCcccccchHhhhhHHHHHHHHHHHHHHH-----------------
Confidence 23489999999999999999999998 5999999999998888888777652
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCChHHHHHHHhhCCCCCCHHHHHHHHhhcCCCC
Q psy11552 655 MHMFAQTLRTLRYCRTRHLVLDPPTPKCESEVKSYVSCLRAMDNQRILTSMSQKLEPRR 713 (714)
Q Consensus 655 ~~~~~~~i~~i~~~q~~~~~~~~~~~~~~~~i~~yi~~~~~~~~~~~L~~lS~~lEPr~ 713 (714)
...|++.| +.++..|++.++.++ |++-+.+|+++||+.
T Consensus 437 ---------------ar~Ynl~p-----d~~f~aWf~~l~~lt-E~es~~~s~eiE~p~ 474 (728)
T KOG3629|consen 437 ---------------ARHYNLHP-----DEEFGAWFQVLEQLT-EDESIIQSCEIEKPP 474 (728)
T ss_pred ---------------hhccCCCc-----hHHHHHHHHhccCCc-HHHHHHHhhcccCCC
Confidence 24789888 999999999999887 677799999999874
No 8
>cd04440 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=99.95 E-value=6.8e-29 Score=212.79 Aligned_cols=92 Identities=23% Similarity=0.343 Sum_probs=87.8
Q ss_pred cHHHHHHHHHHHHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccce
Q psy11552 38 SVPMARAGWVLRTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKI 117 (714)
Q Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~ 117 (714)
+++|+.+|+.||..+++..+.+||||+||+ ++|++||+|+|+||||++++.
T Consensus 2 ~~~i~~~G~~L~~~l~~~~~~likdR~~~l--~~y~~cFvGsElVdWLi~~g~--------------------------- 52 (93)
T cd04440 2 MEDIMSKGVRLYCRLHSLFTPVVKDRDYHL--KTYKSVVPASKLVDWLLAQGD--------------------------- 52 (93)
T ss_pred HHHHHHHHHHHHHHHHccCccceeeceecc--EEcccccchhHHHHHHHHcCC---------------------------
Confidence 568999999999999999999999999999 999999999999999999988
Q ss_pred eeEeecCCCCchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCc
Q psy11552 118 SCFFFSETETIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDK 197 (714)
Q Consensus 118 ~y~f~~~~~~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~ 197 (714)
+.+|+|||.+||+|++.|+|+||.++|.|+|+
T Consensus 53 ------------------------------------------------~~tR~eAv~~gq~Ll~~gii~HV~~~h~F~D~ 84 (93)
T cd04440 53 ------------------------------------------------CRTREEAVILGVGLCNNGFMHHVLEKSEFKDE 84 (93)
T ss_pred ------------------------------------------------CCCHHHHHHHHHHHHhCCCEEecCCCcCcCCc
Confidence 57999999999999999999999999999999
Q ss_pred CceeeeccC
Q psy11552 198 CILYNFWQD 206 (714)
Q Consensus 198 ~~~Yrf~~d 206 (714)
++||||..|
T Consensus 85 ~lfYrF~~d 93 (93)
T cd04440 85 PLLFRFYAD 93 (93)
T ss_pred CeEEEEecC
Confidence 999999875
No 9
>cd04441 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
Probab=99.92 E-value=9.7e-26 Score=191.14 Aligned_cols=84 Identities=35% Similarity=0.549 Sum_probs=80.3
Q ss_pred HHHHHHHHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEee
Q psy11552 43 RAGWVLRTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFF 122 (714)
Q Consensus 43 ~~~~~l~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~ 122 (714)
..|+.|++.+++..+.+||||++++ ++|++||+|+|+||||++++.
T Consensus 2 ~~g~~l~~~~~~~~~~~ik~R~~~~--~~y~~cF~GsElVdWL~~~~~-------------------------------- 47 (85)
T cd04441 2 MRGQRLYEKLMSTENSILQVREEEG--VKYERTFVGSEFIDWLLQEGE-------------------------------- 47 (85)
T ss_pred cchHHHHHHHHcCCCCceeeeEeCC--EEcCCEeEchHHHHHHHHcCC--------------------------------
Confidence 3689999999999999999999999 999999999999999999987
Q ss_pred cCCCCchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceee
Q psy11552 123 SETETIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYN 202 (714)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yr 202 (714)
+.+|+||+.+||+|++.|+|+||.++|.|+|+++|||
T Consensus 48 -------------------------------------------~~sR~eAv~lgq~Ll~~gii~HV~~~h~F~D~~~fYr 84 (85)
T cd04441 48 -------------------------------------------AESRREAVQLCRRLLEHGIIQHVSNKHHFFDSNLLYQ 84 (85)
T ss_pred -------------------------------------------CCCHHHHHHHHHHHHHCCCEEecCCCCCccCCCeeee
Confidence 6999999999999999999999999999999999999
Q ss_pred e
Q psy11552 203 F 203 (714)
Q Consensus 203 f 203 (714)
|
T Consensus 85 F 85 (85)
T cd04441 85 F 85 (85)
T ss_pred C
Confidence 8
No 10
>KOG1113|consensus
Probab=99.92 E-value=5.7e-25 Score=226.76 Aligned_cols=182 Identities=32% Similarity=0.521 Sum_probs=167.3
Q ss_pred CCCCCHHHHHHHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCceEEEEe
Q psy11552 290 PLDRTSEDLEQIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSL 369 (714)
Q Consensus 290 ~~~r~~~~~~~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l 369 (714)
-.+++.+++..+.+++.++.+|++|+++++.++.+ +|++..+++|+.|+.||+.|+.||||.+|+++|++.+. .+.++
T Consensus 109 ~~pKd~e~~~~L~~a~r~~~LF~~Ld~eq~~~v~d-am~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~~~-~v~~~ 186 (368)
T KOG1113|consen 109 YIPKDDETRRRLEEAFRKNLLFANLDDEQLSQVLD-AMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVNGT-YVTTY 186 (368)
T ss_pred CCCCCHHHHHHHHHHHHhccccccCCHHHHHHHHH-hhceeeecCCcEEEecCCcCCcEEEEecceEEEEECCe-EEeee
Confidence 46788899999999999999999999999999999 78999999999999999999999999999999999976 89999
Q ss_pred cCCCccchhhhccCCCcceeeec---------------------------------------------------------
Q psy11552 370 YAGEDFGKLALVNNAPRLIITSM--------------------------------------------------------- 392 (714)
Q Consensus 370 ~~Gd~FGElaLl~~~pr~atv~A--------------------------------------------------------- 392 (714)
+||..|||+||+++.||+|||+|
T Consensus 187 ~~g~sFGElALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~~l~k~er~kv~dal~~k 266 (368)
T KOG1113|consen 187 SPGGSFGELALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILESLEKLERAKVADALGTK 266 (368)
T ss_pred CCCCchhhhHhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhHHHHHHHHHhhhccccee
Confidence 99999999999999999999998
Q ss_pred -------ccccCCCCceEEEEEeCeEEEEeecceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCC
Q psy11552 393 -------VFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGP 465 (714)
Q Consensus 393 -------i~~~g~~~~~~YiI~~G~~~~~~~~~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p 465 (714)
|+.+|+.|+.||+|.+|+|.+...+...+.++++||||||.+++.+.|+. +++.+ .++
T Consensus 267 ~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~v~vkl~~~dyfge~al~~~~pr~--------------Atv~a-~~~ 331 (368)
T KOG1113|consen 267 SYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRDGVEVKLKKGDYFGELALLKNLPRA--------------ATVVA-KGR 331 (368)
T ss_pred eccCCceEEeccCCcceEEEecccccchhhccCCeEEEechhhhcchHHHHhhchhh--------------ceeec-cCC
Confidence 88999999999999999999988665455599999999999999999998 78888 788
Q ss_pred ceeeeecCCccccccchhhhhhh
Q psy11552 466 RRYKFRGPNRFQQITANLDVFLR 488 (714)
Q Consensus 466 ~~~~~l~r~~f~~~tpnI~~~i~ 488 (714)
..|..++++.|+...++-..++.
T Consensus 332 ~kc~~~dk~~ferllgpc~dilk 354 (368)
T KOG1113|consen 332 LKCAKLDKPRFERLLGPCQDILK 354 (368)
T ss_pred ceeeeeChHHHHHHhhHHHHHHH
Confidence 89999999999988777655544
No 11
>cd04442 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
Probab=99.91 E-value=1.2e-25 Score=189.71 Aligned_cols=80 Identities=33% Similarity=0.571 Sum_probs=74.5
Q ss_pred HHHHHHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecC
Q psy11552 45 GWVLRTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSE 124 (714)
Q Consensus 45 ~~~l~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~ 124 (714)
|++||.++++ +.+||||+|++ ++|++||+|+||||||++++.
T Consensus 2 ~~~~~~~~~~--~~~IkdR~~~~--r~y~~cF~GselVdWL~~~~~---------------------------------- 43 (82)
T cd04442 2 GEQLRLRLHE--AKVIKDRRHHL--RTYPNCFVGKELIDWLIEHKE---------------------------------- 43 (82)
T ss_pred cceeEEecCC--CCeeeeeEECC--EEcCceeEcHHHHHHHHHcCC----------------------------------
Confidence 6788887765 68999999999 999999999999999999988
Q ss_pred CCCchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCc-cccCcCceeee
Q psy11552 125 TETIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQ-AFRDKCILYNF 203 (714)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~-~F~d~~~~Yrf 203 (714)
+.+|+||+.+||+||+.|+|+||.++| .|+|+++||||
T Consensus 44 -----------------------------------------~~sR~eAv~lgq~Ll~~gvi~HV~~~h~~F~D~~~fYrF 82 (82)
T cd04442 44 -----------------------------------------ASDRETAIKIMQKLLDHSIIHHVCDEHKEFKDAKLFYRF 82 (82)
T ss_pred -----------------------------------------CCCHHHHHHHHHHHHHCCCEEeccCCcCceeCCceeeeC
Confidence 589999999999999999999999999 79999999998
No 12
>KOG3541|consensus
Probab=99.90 E-value=5.2e-24 Score=221.47 Aligned_cols=193 Identities=28% Similarity=0.413 Sum_probs=167.0
Q ss_pred ccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHHHHHHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcc
Q psy11552 479 ITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRKMIKLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSK 558 (714)
Q Consensus 479 ~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~fI~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~ 558 (714)
....++.++.|||+++..+++++|.....+.|++++++||++|.+|.+++|||++|||+.|++-++|.|||+||.++.
T Consensus 259 ~~ysie~y~~wfn~Lsa~~Atevlk~~kk~~rsamlef~iD~arec~nignfnSmmai~~~lnL~avarlkktw~kv~-- 336 (477)
T KOG3541|consen 259 YDYSIERYMSWFNHLSALCATEVLKAAKKQTRSAMLEFLIDLARECFNIGNFNSMMAIGPGLNLNAVARLKKTWIKVR-- 336 (477)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhccCCCCchHHHHHHHHHHHH--
Confidence 345789999999999999999999999889999999999999999999999999999999999999999999999873
Q ss_pred hHHHHHHHHhccCCCCchHHHHHHHHhC-----------CCCccccccchhhchhccccCCCCcc-CCcccHHHHHHHHH
Q psy11552 559 SKKTYTELEALIDPSKNHRAYRQAVSKL-----------QSPVIPFMPLLLKDLAFTHDGNKTVV-DGLVNFEKMHMFAQ 626 (714)
Q Consensus 559 ~~~~~~~l~~l~~~~~n~~~yR~~l~~~-----------~~p~IPflg~~L~Dl~~i~egn~~~~-~glINf~K~~~i~~ 626 (714)
...|+-|+--++|+.||.+||.+++.. ....|||+.++|+|+.+++.+.+.++ +|.|||.|+..|+.
T Consensus 337 -taK~e~lehqmdps~nflsyr~t~Kaa~wrs~sang~~ekaviPff~l~Lkdl~~i~~~h~~~l~Nghinf~k~~~i~~ 415 (477)
T KOG3541|consen 337 -TAKFEALEHQMDPSSNFLSYRLTDKAAKWRSPSANGAPEKAVIPFFTLFLKDLLDISARHRLFLPNGHINFLKFVGIEG 415 (477)
T ss_pred -HHHHHHHHhcCCchhhhHHHHHHHHHHhhcCccccCCCccccccchhhhHHHHHHHHhhhcccCCCchhHHHHHHhHHh
Confidence 455788999999999999999988842 22489999999999999999999998 79999999999966
Q ss_pred HHHHHhhhhcccCCCCccccccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCChHHHHHHHhhCCCCCCHHHHHHHH
Q psy11552 627 TLRTLRYCRTRHLDHDKTVVDGLVNFEKMHMFAQTLRTLRYCRTRHLVLDPPTPKCESEVKSYVSCLRAMDNQRILTSMS 706 (714)
Q Consensus 627 ii~~i~~~q~~~~~~~~~~~~~l~nf~k~~~~~~~i~~i~~~q~~~~~~~~~~~~~~~~i~~yi~~~~~~~~~~~L~~lS 706 (714)
.++.+..++. ..-.++. .+.+.+|+.-.+++. ++.++.+|
T Consensus 416 qlr~v~~W~~----------------------------------v~c~fek-----~p~v~sylliaevls-e~alm~~s 455 (477)
T KOG3541|consen 416 QLRTVELWSG----------------------------------VACPFEK-----VPNVNSYLLIAEVLS-EPALMRAS 455 (477)
T ss_pred hhhhhhhhhc----------------------------------ccchHhh-----CchHHhHHhhhhhcc-cchhhhhe
Confidence 6665554433 2222232 668999999888876 78899999
Q ss_pred hhcCCCCC
Q psy11552 707 QKLEPRRS 714 (714)
Q Consensus 707 ~~lEPr~~ 714 (714)
.+.||+.+
T Consensus 456 fe~epPen 463 (477)
T KOG3541|consen 456 FESEPPEN 463 (477)
T ss_pred ecccCCcc
Confidence 99999874
No 13
>cd04443 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like proteins, also known as PGR22, contain an N-terminal permease domain, a central transmembrane region and a C-terminal DEP domain. They are orphan receptors of the class B G protein-coupled receptors. Their function is unknown.
Probab=99.90 E-value=3.2e-24 Score=182.10 Aligned_cols=81 Identities=27% Similarity=0.452 Sum_probs=76.0
Q ss_pred HHHHHHhhcCC-CCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecC
Q psy11552 46 WVLRTLLLNDE-SGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSE 124 (714)
Q Consensus 46 ~~l~~~~~~~~-~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~ 124 (714)
+|+++.++..+ ..+||||+|++ ++|++||+|+|+||||++++.
T Consensus 2 ~qf~~~~~~~~~~~~ikdR~~~~--~~y~~cF~GselVdWL~~~~~---------------------------------- 45 (83)
T cd04443 2 EQFVRYHLDQCRQDIVKDRRCGL--RTYKGVFCGCDLVSWLIEVGL---------------------------------- 45 (83)
T ss_pred hHHHHHHHhcccchhhccceecc--eeccccccHHHHHHHHHHcCC----------------------------------
Confidence 68888888777 58999999999 999999999999999999877
Q ss_pred CCCchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceeee
Q psy11552 125 TETIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYNF 203 (714)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yrf 203 (714)
+.+|+||+.+||+|++.|+|+||.++|.|+|+++||||
T Consensus 46 -----------------------------------------~~sR~eAv~lg~~Ll~~G~i~HV~~~~~F~D~~~~YrF 83 (83)
T cd04443 46 -----------------------------------------AQDRGEAVLYGRRLLQGGVLQHITNEHHFRDENLLYRF 83 (83)
T ss_pred -----------------------------------------CCCHHHHHHHHHHHHHCCCEEecCCCcCEecCCeeEeC
Confidence 68999999999999999999999999999999999998
No 14
>cd04439 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and by the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=99.88 E-value=2.5e-23 Score=176.06 Aligned_cols=76 Identities=28% Similarity=0.589 Sum_probs=70.5
Q ss_pred HhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchh
Q psy11552 51 LLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPM 130 (714)
Q Consensus 51 ~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~ 130 (714)
.++...+.+||||+|++ ++|++||+|+|+||||++++.
T Consensus 6 ~~~~~~~~~ikdr~~~~--~~~~~cF~GselVdWL~~~~~---------------------------------------- 43 (81)
T cd04439 6 KMMCKQGSLIKDRRRKL--STFPKCFLGNEFVSWLLEIGE---------------------------------------- 43 (81)
T ss_pred HHhccCCCceEeeEECc--EEcCceeEhHHHHHHHHHcCC----------------------------------------
Confidence 34556688999999999 999999999999999999987
Q ss_pred hhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceeee
Q psy11552 131 ERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYNF 203 (714)
Q Consensus 131 ~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yrf 203 (714)
+.+|+||+.+||+|++.|+|+||.++|.|+|+++||||
T Consensus 44 -----------------------------------~~~r~eAv~lg~~Ll~~G~i~HV~~~h~FkD~~~fYrF 81 (81)
T cd04439 44 -----------------------------------ISKPEEGVNLGQALLENGIIHHVSDKHQFKNEQVLYRF 81 (81)
T ss_pred -----------------------------------CCCHHHHHHHHHHHHHCCCEEecCCCCCEecCCeEEeC
Confidence 58899999999999999999999999999999999998
No 15
>KOG0614|consensus
Probab=99.87 E-value=1.8e-22 Score=215.88 Aligned_cols=184 Identities=22% Similarity=0.353 Sum_probs=164.8
Q ss_pred CCCCCCCHHHHHHHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCceEEE
Q psy11552 288 GKPLDRTSEDLEQIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKGCVT 367 (714)
Q Consensus 288 ~~~~~r~~~~~~~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~ 367 (714)
.+...++....+.|.+++..+.++++|+..++.+|.. +|+.+.+++|..|++|||+|+.+|++.+|+++|.+.+. .++
T Consensus 139 l~~~~Kd~~~k~lI~dAi~~NdFLknLd~~Qi~e~v~-~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~~g~-ll~ 216 (732)
T KOG0614|consen 139 LPRYNKDVGAKQLIRDAIQKNDFLKNLDASQIKELVD-CMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSREGK-LLG 216 (732)
T ss_pred cccccCCccHHHHHHHHHHhhHHHHhhhHHHHHHHHH-hhCcccccCCcEEEecCCCCceEEEeecceEEEeeCCe-eee
Confidence 3455666777889999999999999999999999999 89999999999999999999999999999999998877 899
Q ss_pred EecCCCccchhhhccCCCcceeeec-------------------------------------------------------
Q psy11552 368 SLYAGEDFGKLALVNNAPRLIITSM------------------------------------------------------- 392 (714)
Q Consensus 368 ~l~~Gd~FGElaLl~~~pr~atv~A------------------------------------------------------- 392 (714)
++++|..|||+|++++++|+|||.|
T Consensus 217 ~m~~gtvFGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le 296 (732)
T KOG0614|consen 217 KMGAGTVFGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPEELLLKIADVLE 296 (732)
T ss_pred ccCCchhhhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHH
Confidence 9999999999999999999999997
Q ss_pred ---------ccccCCCCceEEEEEeCeEEEEeecc-----eeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeec
Q psy11552 393 ---------VFHQGDEGKSWYIIIQGSVDVVIYGK-----GCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTT 458 (714)
Q Consensus 393 ---------i~~~g~~~~~~YiI~~G~~~~~~~~~-----~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~it 458 (714)
|+++|+.|+.||+|-.|+|.++...+ ..+..+..||||||.+|+.++.|. ++
T Consensus 297 ~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~FGE~al~~edvRt--------------An 362 (732)
T KOG0614|consen 297 EEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDYFGERALLGEDVRT--------------AN 362 (732)
T ss_pred HHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccchhhHHHhhccCccc--------------hh
Confidence 89999999999999999999998552 235588999999999999999887 66
Q ss_pred cccccCCceeeeecCCccccccchhhhhh
Q psy11552 459 APDIKGPRRYKFRGPNRFQQITANLDVFL 487 (714)
Q Consensus 459 v~ei~~p~~~~~l~r~~f~~~tpnI~~~i 487 (714)
+.+....+.|+++.++.|.+..+.+..+.
T Consensus 363 iia~~~gv~cl~lDresF~~liG~l~~l~ 391 (732)
T KOG0614|consen 363 IIAQAPGVECLTLDRESFKKLIGDLEELK 391 (732)
T ss_pred hhccCCCceEEEecHHHHHHhcccHHHhh
Confidence 66633336889999999998888887776
No 16
>cd04448 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol phosphate kinase) domain. PIKfyve-like proteins are important phosphatidylinositol (3)-monophosphate (PtdIns(3)P)-5-kinases, producing PtdIns(3,5)P2, which plays a major role in multivesicular body (MVB) sorting and control of retrograde traffic from the vacuole back to the endosome and/or Golgi. PIKfyve itself has been shown to be play a role in regulating early-endosome-to-trans-Golgi network (TGN) retrograde trafficking.
Probab=99.86 E-value=4.9e-22 Score=168.62 Aligned_cols=78 Identities=29% Similarity=0.460 Sum_probs=69.9
Q ss_pred HHHHhhcCC-CCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCC
Q psy11552 48 LRTLLLNDE-SGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETE 126 (714)
Q Consensus 48 l~~~~~~~~-~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~ 126 (714)
|+..+.... +..||||++++ ++|++||+|+|+||||++++.
T Consensus 2 l~~~m~~~~~gv~i~drr~~~--~~y~~cF~GselVdWL~~~~~------------------------------------ 43 (81)
T cd04448 2 LWEKICRSSTGIEFQDHRYRL--RTYTNCILGKELVNWLIRQGK------------------------------------ 43 (81)
T ss_pred HHHHhhCcCCCCeeEEEEECC--EEcCcccChHHHHHHHHHcCC------------------------------------
Confidence 344555444 56799999999 999999999999999999887
Q ss_pred CchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceee
Q psy11552 127 TIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYN 202 (714)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yr 202 (714)
+.+|+||+++||+|++.|+|+||.++|.|+|+++|||
T Consensus 44 ---------------------------------------~~~R~eAv~~gq~Ll~~g~i~hV~~~~~F~D~~~~Yr 80 (81)
T cd04448 44 ---------------------------------------AATRVQAIAIGQALLDAGWIECVSDDDLFRDEYALYK 80 (81)
T ss_pred ---------------------------------------CCCHHHHHHHHHHHHHCCCEEecCCCCccccCccccC
Confidence 6999999999999999999999999999999999997
No 17
>cd04449 DEP_DEPDC5-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
Probab=99.81 E-value=3.2e-20 Score=158.91 Aligned_cols=79 Identities=27% Similarity=0.424 Sum_probs=70.6
Q ss_pred HHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCc
Q psy11552 49 RTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETI 128 (714)
Q Consensus 49 ~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~ 128 (714)
-..|.+..+..|+||++++ ++|++||+|+|+||||+++...
T Consensus 5 ~~~m~~~~~~~i~~r~~~~--~~~~~cF~G~e~VdWL~~~~~~------------------------------------- 45 (83)
T cd04449 5 AEAMRDPSGIGIFDRSWHK--GLPSNCFIGSEAVSWLINNFED------------------------------------- 45 (83)
T ss_pred HHHHhCCCCCceeechhcC--ccCCcceEhHHHHHHHHHhCCC-------------------------------------
Confidence 3445555555899999999 9999999999999999999774
Q ss_pred hhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceeee
Q psy11552 129 PMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYNF 203 (714)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yrf 203 (714)
+.+|+||+.+||.|++.|+|+||.++|.|+|+++|||+
T Consensus 46 -------------------------------------~~~r~eAv~lgq~Ll~~g~I~hv~~~~~F~d~~~~Yr~ 83 (83)
T cd04449 46 -------------------------------------VDTREEAVELGQELMNEGLIEHVSGRHPFLDGFYFYYI 83 (83)
T ss_pred -------------------------------------CCCHHHHHHHHHHHHHCCCEEecCCCCCccCCCEeEeC
Confidence 69999999999999999999999999999999999996
No 18
>cd04438 DEP_dishevelled DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins. Dishevelled-like proteins play a key role in the transduction of the Wnt signal from the cell surface to the nucleus, which in turn is an important regulatory pathway for cellular development and growth. They contain an N-terminal DIX domain, a central PDZ domain, and a C-terminal DEP domain.
Probab=99.80 E-value=7.2e-20 Score=156.06 Aligned_cols=77 Identities=27% Similarity=0.406 Sum_probs=67.8
Q ss_pred HhhcCCCCc-cccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCch
Q psy11552 51 LLLNDESGT-LRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIP 129 (714)
Q Consensus 51 ~~~~~~~~~-i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~ 129 (714)
.|...++.+ ||||+|++ ++|++||+|+|+||||+++.+.
T Consensus 6 ~m~~~~~Gl~ikdR~~~~--~~~p~~F~GsdlVdWL~~~~~~-------------------------------------- 45 (84)
T cd04438 6 VMRRPDSGLEIKDRMWLK--ITIPNSFIGSDLVDWLLSHVEG-------------------------------------- 45 (84)
T ss_pred hhcCCCCCCceEEEEEee--EECCccccchHHHHHHHHhCCC--------------------------------------
Confidence 344445444 99999999 9999999999999999999874
Q ss_pred hhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceeeec
Q psy11552 130 MERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYNFW 204 (714)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yrf~ 204 (714)
+.+|+||+.+||.|++.|+|+||.++|.|.|+ .+|+|-
T Consensus 46 ------------------------------------~~~R~eAv~~g~~Ll~~G~i~HV~~~h~F~d~-~yy~~~ 83 (84)
T cd04438 46 ------------------------------------LTDRREARKYASSLLKLGYIRHTVNKITFSEQ-CYYVFG 83 (84)
T ss_pred ------------------------------------CCCHHHHHHHHHHHHHCCcEEecCCCccccCC-eEEecC
Confidence 69999999999999999999999999999975 899884
No 19
>cd04446 DEP_DEPDC4 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins. DEPDC4 is a DEP domain containing protein of unknown function.
Probab=99.77 E-value=2.5e-19 Score=154.73 Aligned_cols=75 Identities=24% Similarity=0.304 Sum_probs=63.5
Q ss_pred CCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhHHHH
Q psy11552 57 SGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERIYYS 136 (714)
Q Consensus 57 ~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~~~~ 136 (714)
+.-|||||+|+ |+|++||+|+||||||+++..
T Consensus 11 ~v~ikdRr~~l--k~y~~CF~GsEaVDwL~~~l~---------------------------------------------- 42 (95)
T cd04446 11 QVEVKKRRHNL--KSYHDCFLGSEAVDVVLAHLM---------------------------------------------- 42 (95)
T ss_pred cCcccceeeec--eecccccchHHHHHHHHHHHh----------------------------------------------
Confidence 45899999999 999999999999999988643
Q ss_pred hhcCCCcccccccchhhHHHHHHhhC--CCccCCHHHHHHHHHHHHhcCcceec-------CCCccccCc-Cceee
Q psy11552 137 LYSGGRTIARRCASGSELVDWLMSLA--PSLAVSRQITTGMWQALLEEGVIYHV-------NGEQAFRDK-CILYN 202 (714)
Q Consensus 137 ~~~~~~~~~~~cf~G~e~vdwl~~~~--~~~~~~r~~av~l~q~Ll~~g~i~hv-------~~~~~F~d~-~~~Yr 202 (714)
++. .....+|+|||.+||+||++|+|+|| ..++.|+|+ ..|||
T Consensus 43 -----------------------~n~~f~~~~~tR~~Av~l~q~Ll~~gvi~~V~~~~~~~~k~~~F~D~~~~lYR 95 (95)
T cd04446 43 -----------------------QNKYFGDVDVPRAKAVRLCQALMDCRVFEAVGTKVFKKKKRAVFEDSSSSLYR 95 (95)
T ss_pred -----------------------hccccCcccCCHHHHHHHHHHHHHcCCeeeccchhccccccccccCCCcCccC
Confidence 220 00147999999999999999999999 577999999 79997
No 20
>cd04447 DEP_BRCC3 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in BBRC3-like proteins. BBRC3, also known as DEPDC1B, is a DEP containing protein of unknown function.
Probab=99.73 E-value=1.8e-18 Score=146.78 Aligned_cols=78 Identities=31% Similarity=0.511 Sum_probs=66.2
Q ss_pred CCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhHHH
Q psy11552 56 ESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERIYY 135 (714)
Q Consensus 56 ~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~~~ 135 (714)
.+-.||+||+|+ |+|++||+|+||||||+++..+ ..+|
T Consensus 12 ~g~~vk~rR~~l--r~y~~CF~gsEAVDwL~~~l~~---------------------------------n~~f------- 49 (92)
T cd04447 12 AGMPLRKHRQHF--KSYENCFTASEAVDWLHELLRS---------------------------------NSNF------- 49 (92)
T ss_pred ccCChHHHHHhc--ccCccccchHHHHHHHHHHHHh---------------------------------cccc-------
Confidence 345899999999 9999999999999999999542 1111
Q ss_pred HhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCC---CccccCcCceeee
Q psy11552 136 SLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNG---EQAFRDKCILYNF 203 (714)
Q Consensus 136 ~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~---~~~F~d~~~~Yrf 203 (714)
|+ ..+|.+||.++|.|++.++|+||.+ ++.|+|++.||||
T Consensus 50 --------------------------g~--~vtR~~av~l~qkll~~hVie~V~g~~~~~~FeD~~~lYRF 92 (92)
T cd04447 50 --------------------------GP--EVTRQQTVQLLKKFLKNHVIEDIKGRWGKEDLEDNNHLYRF 92 (92)
T ss_pred --------------------------CC--CCCHHHHHHHHHHHHHcCCchhhccccccCccccccccccC
Confidence 22 5799999999999999999999955 4689999999998
No 21
>KOG3417|consensus
Probab=99.69 E-value=2.3e-17 Score=198.20 Aligned_cols=193 Identities=24% Similarity=0.341 Sum_probs=174.1
Q ss_pred HHHHHHhh---hheeeeeccccccCCceeeeecCCccccccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHHHHH
Q psy11552 443 QLHMYLEQ---MAVYFTTTAPDIKGPRRYKFRGPNRFQQITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRKMIK 519 (714)
Q Consensus 443 ~~~~~l~~---~~ly~~itv~ei~~p~~~~~l~r~~f~~~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~fI~ 519 (714)
+++.+++. ..+|+.+.+.|. +...|.+.......|++..++.++|.++.||..+|+..+.++.|+.++.++++
T Consensus 218 e~~~~lt~lle~~~~~~iq~~e~----~~~~~~~~~~~~~~P~~~~~~~~~~~~s~wv~~~il~~e~l~~r~~~~~~~L~ 293 (840)
T KOG3417|consen 218 ELSEQLTSLLESPDFRKIQPFEL----LSQSWLKKDKKINSPNIESSTSRFNHLSSWVEQEILNAEQLEERAEVILHFLE 293 (840)
T ss_pred hhccccccccccccccccCHHHH----HHhhhhhcccccCCCchhhhhhcccchHHHHHHHHhccccHHHHHHhhHHHHH
Confidence 36666664 357777888886 34555666777889999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCcchHHHHHHHHhccCCCCchHHHHHHHHhCCC-Cccccccchh
Q psy11552 520 LAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPSKSKKTYTELEALIDPSKNHRAYRQAVSKLQS-PVIPFMPLLL 598 (714)
Q Consensus 520 iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~~~~~~~~~l~~l~~~~~n~~~yR~~l~~~~~-p~IPflg~~L 598 (714)
+|.++.+++|||++++++.|+++++++||++||+.++.+..+.+..+..++...+||+.||..+..++. ||||++|+++
T Consensus 294 ~a~~~~el~n~~~~~~~v~~~~~s~i~~L~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~yr~~l~~~~~~~~ip~~~~~l 373 (840)
T KOG3417|consen 294 VAAKLSELNNLNSLMEVVSGLQSSPISRLKKTGSYLSSEIKKKLILLTELTSLLDNVQNYRRYLQSCNISPCIPILGVYL 373 (840)
T ss_pred HhhhhhhccccccHHHHHhccccchhhhhhhhhccccccchhhhhhHHHHhhcchHHHHHHHHhhhcccCcccccccccc
Confidence 999999999999999999999999999999999999997888888888888888899999999999999 9999999999
Q ss_pred hc-hhccccCCCCccC--C--cccHHHHHHHHHHHHHHhhhhcccC
Q psy11552 599 KD-LAFTHDGNKTVVD--G--LVNFEKMHMFAQTLRTLRYCRTRHL 639 (714)
Q Consensus 599 ~D-l~~i~egn~~~~~--g--lINf~K~~~i~~ii~~i~~~q~~~~ 639 (714)
.| +..+++++|++.. + .+++.|+..+.+++.++..++++.+
T Consensus 374 ~d~~~~l~~~~p~~~~~~~~~e~~~~~~~~~~~i~~elq~l~~~~~ 419 (840)
T KOG3417|consen 374 LDSLVKLNEALPTKLLRIGERELSFSKLKVLLEIISELQDLQNKEL 419 (840)
T ss_pred HHHHHhhhhcCCccccccccccccchhhhHHHHHHHHHHHHhcccc
Confidence 99 9999999999884 4 8999999999999999999888654
No 22
>PF00610 DEP: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); InterPro: IPR000591 This entry represents the DEP (Dishevelled, Egl-10 and Pleckstrin) domain, a globular domain of about 80 residues that is found in over 50 proteins involved in G-protein signalling pathways. It was named after the three proteins it was initially found in: Dishevelled (Dsh and Dvl), which play a key role in the transduction of the Wg/Wnt signal from the cell surface to the nucleus; it is a segment polarity protein required to establish coherent arrays of polarized cells and segments in embryos, and plays a role in wingless signalling. Egl-10, which regulates G-protein signalling in the central nervous system. Pleckstrin, the major substrate of protein kinase C in platelets; Pleckstrin contains two PH domains flanking the DEP domain. Mammalian regulators of G-protein signalling also contain these domains, and regulate signal transduction by increasing the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form. It has been proposed that the DEP domain could play a selective role in targeting DEP domain-containing proteins to specific subcellular membranous sites, perhaps even to specific G protein-coupled signaling pathways [, ]. Nuclear magnetic resonance spectroscopy has revealed that the DEP domain comprises a three-helix bundle, a beta-hairpin 'arm' composed of two beta-strands and two short beta-strands in the C-terminal region [].; GO: 0035556 intracellular signal transduction; PDB: 1UHW_A 1V3F_A 2YSR_A 2CSO_A 1W4M_A 2PBI_C 1O7F_A 2BYV_E 1FSH_A 3ML6_D ....
Probab=99.69 E-value=4.3e-17 Score=137.02 Aligned_cols=71 Identities=34% Similarity=0.565 Sum_probs=61.4
Q ss_pred CccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhHHHHh
Q psy11552 58 GTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERIYYSL 137 (714)
Q Consensus 58 ~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~~~~~ 137 (714)
..|+||++++ ++|++||+|+|+||||+++...
T Consensus 2 v~i~~~~~~~--~~~~~~F~G~e~v~WL~~~~~~---------------------------------------------- 33 (74)
T PF00610_consen 2 VPIKDRRKRL--KTYPNCFTGSEAVDWLMDNFEG---------------------------------------------- 33 (74)
T ss_dssp SCSEEEECSS--EEECCEEEHHHHHHHHHHTSCT----------------------------------------------
T ss_pred CccEEEEECC--EEcCCEeEhHHHHHHHHHhccc----------------------------------------------
Confidence 4688999988 8899999988888888875431
Q ss_pred hcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCc-cccCc-Cceeee
Q psy11552 138 YSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQ-AFRDK-CILYNF 203 (714)
Q Consensus 138 ~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~-~F~d~-~~~Yrf 203 (714)
.+.+|+||+.+||.|++.|+|+||.+++ .|+|+ +.||||
T Consensus 34 ---------------------------~~~~r~eA~~l~q~Ll~~g~i~~v~~~~~~F~d~~~~~Yrf 74 (74)
T PF00610_consen 34 ---------------------------FVRDREEAVQLGQELLDHGFIEHVSDKSKQFKDSKNSLYRF 74 (74)
T ss_dssp ---------------------------STSSHHHHHHHHHHHHHCTSEEESSSSSHSS-SSSSSEEEE
T ss_pred ---------------------------cccCHHHHHHHHHHHHHCCCEEECCCCCCCEECCCCcEEEC
Confidence 1689999999999999999999999998 89999 999998
No 23
>cd04444 DEP_PLEK2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 2-like proteins. Pleckstrin 2 is found in a wide variety of cell types, which suggest a more general role in signaling than pleckstrin 1. Pleckstrin-like proteins contain a central DEP domain, flanked by 2 PH (pleckstrin homology) domains.
Probab=99.67 E-value=3.2e-17 Score=144.06 Aligned_cols=86 Identities=24% Similarity=0.317 Sum_probs=64.0
Q ss_pred HHHHhhc-CCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCC
Q psy11552 48 LRTLLLN-DESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETE 126 (714)
Q Consensus 48 l~~~~~~-~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~ 126 (714)
|...|.+ ..+.-+.+|++++ ++|++||+|+|+||||++++.
T Consensus 5 L~~~mq~~~~Gik~~~~r~~~--k~y~~CF~Gse~VDWLv~~~~------------------------------------ 46 (109)
T cd04444 5 IVDKMHDSSTGIRHSPNMEQG--STYKKTFLGSALVDWLISNSF------------------------------------ 46 (109)
T ss_pred HHHHHhCCCcCcchhhhhhcc--ccccccccchHHHHHHHHCCC------------------------------------
Confidence 4445544 3466777999999 999999999999999999988
Q ss_pred CchhhhHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecC-----------CCcccc
Q psy11552 127 TIPMERIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVN-----------GEQAFR 195 (714)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~-----------~~~~F~ 195 (714)
+.+|.||+.+||+||+.|+|+||. .++.|.
T Consensus 47 ---------------------------------------~i~R~EAv~l~q~Lmd~gli~hV~~~s~~~~~~~~~~~~f~ 87 (109)
T cd04444 47 ---------------------------------------AASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFL 87 (109)
T ss_pred ---------------------------------------CCCHHHHHHHHHHHHhCCchhhHHHHhhhhhhccccccccc
Confidence 356777777777777777777762 146798
Q ss_pred Cc-CceeeeccCccCC
Q psy11552 196 DK-CILYNFWQDKEGS 210 (714)
Q Consensus 196 d~-~~~Yrf~~d~~~~ 210 (714)
|+ ..||+|....+..
T Consensus 88 d~s~aly~F~~~~~~~ 103 (109)
T cd04444 88 DDSTALYTFAESYKKK 103 (109)
T ss_pred cCchHHHHhHHHHHhc
Confidence 87 5999998776543
No 24
>smart00049 DEP Domain found in Dishevelled, Egl-10, and Pleckstrin. Domain of unknown function present in signalling proteins that contain PH, rasGEF, rhoGEF, rhoGAP, RGS, PDZ domains. DEP domain in Drosophila dishevelled is essential to rescue planar polarity defects and induce JNK signalling (Cell 94, 109-118).
Probab=99.63 E-value=4.1e-16 Score=132.12 Aligned_cols=71 Identities=42% Similarity=0.621 Sum_probs=63.9
Q ss_pred CCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhHHHH
Q psy11552 57 SGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERIYYS 136 (714)
Q Consensus 57 ~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~~~~ 136 (714)
+..++||++++ ++|++||+|+|+|+||++++.
T Consensus 4 gl~~~~~~~~~--~~~~~~F~G~e~v~wL~~~~~---------------------------------------------- 35 (77)
T smart00049 4 GLKLRDRKYFL--KTYPNCFTGSELVDWLMDNLE---------------------------------------------- 35 (77)
T ss_pred CcccEEEEECC--EECcceeEcHHHHHHHHHcCC----------------------------------------------
Confidence 34568899988 889999998888888888877
Q ss_pred hhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecC--CCccccCcCceeeec
Q psy11552 137 LYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVN--GEQAFRDKCILYNFW 204 (714)
Q Consensus 137 ~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~--~~~~F~d~~~~Yrf~ 204 (714)
+.+|.+|+.+||.|++.|+|+||. ..+.|+|+..||||.
T Consensus 36 -----------------------------~~~r~eA~~l~~~ll~~g~i~~v~~~~~~~F~d~~~~Yrf~ 76 (77)
T smart00049 36 -----------------------------IIDREEAVHLGQLLLDEGLIHHVNGPNKHTFKDSKALYRFT 76 (77)
T ss_pred -----------------------------cCCHHHHHHHHHHHHHCCCEEEeCCCCcCccccCCEEEEeC
Confidence 689999999999999999999999 789999999999996
No 25
>cd04371 DEP DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is present. New studies show that the DEP domain of Sst2, a yeast RGS protein is necessary and sufficient for receptor interaction.
Probab=99.56 E-value=4.4e-15 Score=127.00 Aligned_cols=72 Identities=39% Similarity=0.640 Sum_probs=64.4
Q ss_pred cCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhH
Q psy11552 54 NDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERI 133 (714)
Q Consensus 54 ~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~ 133 (714)
...+..++||++++ ++|++||+|+|+|+||+++..
T Consensus 9 ~~~~~~~~~~~~~~--~~~~~~F~G~e~v~WL~~~~~------------------------------------------- 43 (81)
T cd04371 9 SDSGVPIKDRKYHL--KTYPNCFTGSELVDWLLDNLE------------------------------------------- 43 (81)
T ss_pred cCCCCccEEEEECC--EECCceeEcHHHHHHHHHhCC-------------------------------------------
Confidence 33456889999998 999999999999999988887
Q ss_pred HHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCC-CccccCcCceee
Q psy11552 134 YYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNG-EQAFRDKCILYN 202 (714)
Q Consensus 134 ~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~-~~~F~d~~~~Yr 202 (714)
+.+|++|+.+||.|++.|+|+||.+ ++.|.|+..||+
T Consensus 44 --------------------------------~~~r~ea~~~~~~ll~~g~i~~v~~~~~~F~d~~~~Y~ 81 (81)
T cd04371 44 --------------------------------AITREEAVELGQALLKHGLIHHVSDDKHTFRDSYALYR 81 (81)
T ss_pred --------------------------------CCCHHHHHHHHHHHHHCCCEEEeCCCCCccccCCeecC
Confidence 5899999999999999999999999 999999988885
No 26
>cd04450 DEP_RGS7-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7. This subgroup contains RGS7, RGS6, RGS9 and RGS11. They share a common domain architecture, containing, beside the RGS domain, a DEP domain and a GGL (G-protein gamma subunit-like ) domain. RGS proteins are GTPase-activating (GAP) proteins of heterotrimeric G proteins by increasing the rate of GTP hydrolysis of the alpha subunit. The fungal homologs, like yeast Sst2, share a related common domain architecture, containing RGS and DEP domains. Sst2 has been identified as the principal regulator of mating pheromone signaling and recently the DEP domain of Sst2 has been shown to be necessary and sufficient to mediate receptor interaction.
Probab=99.55 E-value=6.3e-15 Score=127.82 Aligned_cols=74 Identities=20% Similarity=0.302 Sum_probs=63.9
Q ss_pred CCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhHHH
Q psy11552 56 ESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERIYY 135 (714)
Q Consensus 56 ~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~~~ 135 (714)
.+.-+++||+++ ++|++||+|+++|+||+++..
T Consensus 11 ~Gv~~~~~r~~~--~~~~~~F~G~~~v~WL~~~~~--------------------------------------------- 43 (88)
T cd04450 11 VGVRMRTEKSFL--TTVPYAFTGKAIVQWLMDCTD--------------------------------------------- 43 (88)
T ss_pred CCeeeeeeEEee--eEcCceeEhHHHHHHHHHCCC---------------------------------------------
Confidence 366678888888 888888888888888887766
Q ss_pred HhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCcc-ccCcCceeeeccC
Q psy11552 136 SLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQA-FRDKCILYNFWQD 206 (714)
Q Consensus 136 ~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~-F~d~~~~Yrf~~d 206 (714)
+.+|+||+.+|+.|++.|+|+||.+++. |+|++.||||...
T Consensus 44 ------------------------------~~~~~EA~~~~~~ll~~gli~~V~~~~~~~~~~~~~yr~~~~ 85 (88)
T cd04450 44 ------------------------------VVDPSEALEIAALFVKYGLITPVSDHRSLLKPDETLYRFQAP 85 (88)
T ss_pred ------------------------------CCCHHHHHHHHHHHHHCCCEEEecCCcccccCCCceEecccc
Confidence 6999999999999999999999998765 8999999999843
No 27
>cd04445 DEP_PLEK1 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 1-like proteins. Pleckstrin 1 plays a role in cell spreading and reorganization of actin cytoskeleton in platelets and leukocytes. Its activity is highly regulated by phosphorylation, mainly by protein kinase C. Pleckstrin-like proteins contain a central DEP domain, flanked by 2 PH (pleckstrin homology) domains.
Probab=99.29 E-value=2.9e-12 Score=109.10 Aligned_cols=69 Identities=26% Similarity=0.391 Sum_probs=60.0
Q ss_pred HHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecC----------CCccccCc-Cceeee
Q psy11552 135 YSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVN----------GEQAFRDK-CILYNF 203 (714)
Q Consensus 135 ~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~----------~~~~F~d~-~~~Yrf 203 (714)
.+.+-...++|++||+|+.+||||+++.. +.+|.||+.+++.|+++|+|.+|. .+..|-|+ ..||+|
T Consensus 18 ~~~~~~~~tv~~hcftGsdVVdWLv~~~~--v~~r~EAl~las~Ll~eGyL~P~gd~sk~a~~~~~~~~fld~~~aly~f 95 (99)
T cd04445 18 ELNLEKDKKVFNHCFTGSCVIDWLVSNQS--VRNRQEGLMLASSLLNEGYLQPAGDTSKNAADGLAENPFLDNPDAFYYF 95 (99)
T ss_pred hhhHHHhhccccceecccHHHHHHHHhhc--ccchHHHHHHHHHHHHcCCeeecCccchhHhhccccccccCCccceeec
Confidence 34455567899999999999999999987 789999999999999999999993 35688887 799999
Q ss_pred cc
Q psy11552 204 WQ 205 (714)
Q Consensus 204 ~~ 205 (714)
.+
T Consensus 96 ~d 97 (99)
T cd04445 96 PD 97 (99)
T ss_pred cc
Confidence 64
No 28
>KOG3417|consensus
Probab=99.27 E-value=1.7e-11 Score=147.89 Aligned_cols=152 Identities=25% Similarity=0.485 Sum_probs=125.2
Q ss_pred cccchhhhhhhhhhhHHHhHhhhhccccChhhHHHHHHHHHHHHHHHhhcCChHHHHHHHHhcCchhhhchHHhhccCCc
Q psy11552 478 QITANLDVFLRRFNEIQYWVITEILLVTSLNKRVQILRKMIKLAAYCKEYRNINALFAVLMGLSNVAVSRLSLTWDKLPS 557 (714)
Q Consensus 478 ~~tpnI~~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~fI~iA~~~~~l~Nf~s~~aI~~gL~~~~V~RLk~Tw~~l~~ 557 (714)
....+...+...++.+++|+.+.|........| |+.++.+|..++||.+++++.++|.+++++|+..+|....+
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~s------~~~~~~~~~~~~~~~~l~~~~s~l~s~~~~~~~~~~~l~~~ 716 (840)
T KOG3417|consen 643 EKSKKDLAFTETFNLVSFWSSTIILTQQPAKRS------FIHVAKFCKIMKNFRTLMNINSALASSPIHRSTPLWRLEWP 716 (840)
T ss_pred ccccchHHHHHHHhhhhhhhHHhhhccccccch------hHHHHhhhhhhCchhhhhHHHHHhccchhhhcchhhcccch
Confidence 455667788899999999999988888776666 99999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhccCCCCchHHHHHH-HHhCCCCccccccchhhchhccccCCCCccCCcccHHHHHH---HHHHHHHHhh
Q psy11552 558 KSKKTYTELEALIDPSKNHRAYRQA-VSKLQSPVIPFMPLLLKDLAFTHDGNKTVVDGLVNFEKMHM---FAQTLRTLRY 633 (714)
Q Consensus 558 ~~~~~~~~l~~l~~~~~n~~~yR~~-l~~~~~p~IPflg~~L~Dl~~i~egn~~~~~glINf~K~~~---i~~ii~~i~~ 633 (714)
+....+..+..++....|+..||.+ +....+||+||+|++|+||||.++|||++.++.+|+.++.+ +..+++.+..
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~cvP~~~~~l~dltf~~~gnpd~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (840)
T KOG3417|consen 717 KDIREFSALSPLVIDKSNSSTYRRALLSVPEPPCVPFLGVILQDLTFVHTGNPDYLDSVVNHGKFDKRTNIKDIVQEVQK 796 (840)
T ss_pred hhHHHhhccccchhcccccHHHHHHHhcCCCCCCcCceeEEeecceeecCCCCCccccccchhHHHHHHHHHHHHHHHHH
Confidence 9998888888877766666555555 44588999999999999999999999999987666655554 4334444444
Q ss_pred hh
Q psy11552 634 CR 635 (714)
Q Consensus 634 ~q 635 (714)
+|
T Consensus 797 ~~ 798 (840)
T KOG3417|consen 797 FQ 798 (840)
T ss_pred hc
Confidence 33
No 29
>KOG0614|consensus
Probab=99.11 E-value=6.2e-11 Score=128.23 Aligned_cols=94 Identities=27% Similarity=0.398 Sum_probs=86.2
Q ss_pred HHHHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce-----EEEEecCC
Q psy11552 298 LEQIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG-----CVTSLYAG 372 (714)
Q Consensus 298 ~~~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~-----~v~~l~~G 372 (714)
.+...++|..+++|.+|+++.+..++++ +.+.+|.+|+.|++||+.|+.||||.+|.|.|...+.+ .+.+++.|
T Consensus 267 ~~~~~~fLrsv~~~q~l~Ee~L~KiaD~-le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kG 345 (732)
T KOG0614|consen 267 HEQYMNFLRSVPLFQNLPEELLLKIADV-LEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKG 345 (732)
T ss_pred HHHHHHHHHhhhhhccCCHHHHHHHHHH-HHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhcccc
Confidence 4567889999999999999999999995 55669999999999999999999999999999987654 68899999
Q ss_pred CccchhhhccCCCcceeeec
Q psy11552 373 EDFGKLALVNNAPRLIITSM 392 (714)
Q Consensus 373 d~FGElaLl~~~pr~atv~A 392 (714)
|+|||-||+....|+|.++|
T Consensus 346 d~FGE~al~~edvRtAniia 365 (732)
T KOG0614|consen 346 DYFGERALLGEDVRTANIIA 365 (732)
T ss_pred chhhHHHhhccCccchhhhc
Confidence 99999999999999999988
No 30
>KOG0498|consensus
Probab=99.10 E-value=6e-10 Score=128.79 Aligned_cols=152 Identities=19% Similarity=0.240 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHhhccchHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCHHHHHHH-HHHHhCCccCCCCCHHH
Q psy11552 240 AILRYILRKQLKKLQNRYLPREYMLHLEREIEDKEEEEKEEEEEERQIGKPLDRTSEDLEQI-YEELLHLKPLHHLSNSV 318 (714)
Q Consensus 240 ~~~r~ilr~~~k~l~~r~l~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~i-~~~L~~~~~F~~Ls~~~ 318 (714)
...|.-.+.+.+.-..|-||......+.+-++.+-....--+++..+..-|.....+-...+ .+.+.++|+|+++++.-
T Consensus 355 ~~~r~k~rd~e~~m~~~~LP~~LRqRi~~y~q~kw~~t~Gvdee~lL~~LP~~LR~dI~~hL~~~lv~~vpLF~~md~~~ 434 (727)
T KOG0498|consen 355 EEMRDKMRDAEQWMSRRQLPPDLRQRIRRYEQYKWLATRGVDEEELLQSLPKDLRRDIKRHLCLDLVRKVPLFAGMDDGL 434 (727)
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhhccCcCHHHHHHhCCHHHHHHHHHHHhHHHHhhCchhhcCCHHH
Confidence 34445555677777778888877777765554443332233334444444555444444555 55666799999999999
Q ss_pred HHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce---EEEEecCCCccc-hhhhccC-CCcceeeec
Q psy11552 319 RRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG---CVTSLYAGEDFG-KLALVNN-APRLIITSM 392 (714)
Q Consensus 319 l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~---~v~~l~~Gd~FG-ElaLl~~-~pr~atv~A 392 (714)
+..|+. .+...+|.+|+.|++|||+.+.||||.+|.+++...++| .++.|++||+|| |+..... .|.++||+|
T Consensus 435 L~al~~-rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVra 512 (727)
T KOG0498|consen 435 LDALCS-RLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDGGGFFVVAILGPGDFFGEELLTWCLDLPQTRTVRA 512 (727)
T ss_pred HHHHHH-HhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccCCceEEEEEecCCCccchHHHHHHhcCCCCceeeh
Confidence 999999 556669999999999999999999999999999887653 789999999999 7877776 788999988
No 31
>KOG0500|consensus
Probab=99.04 E-value=9.9e-10 Score=118.67 Aligned_cols=140 Identities=22% Similarity=0.256 Sum_probs=112.3
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhCCccCCCCCHHHHHHHH
Q psy11552 244 YILRKQLKKLQNRYLPREYMLHLEREIEDKEEEEKEEEEEERQIGKPLDRTSEDLEQIYEELLHLKPLHHLSNSVRRELA 323 (714)
Q Consensus 244 ~ilr~~~k~l~~r~l~~~~~~~l~~e~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~i~~~L~~~~~F~~Ls~~~l~~L~ 323 (714)
|..|+..+.++.|.+++....+.+....+. .+..-..|+.-+..-.+.-..+.|+++++|....+.-+.+|.
T Consensus 256 M~~RkV~~~lq~rVikwfdYlwa~~~~~DE--------eevl~~LP~kL~aeIA~nvh~dTLkkV~iF~~ce~~lL~elV 327 (536)
T KOG0500|consen 256 MRYRKVPKALQTRVIKWFDYLWAHKKIVDE--------EEVLKLLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELV 327 (536)
T ss_pred HHHhcccHHHHHHHHHHHHHHHhccccccH--------HHHHHhCCHHHHhHhHHHHHHHHHHhhhHHHhcchhHHHHHH
Confidence 667778888888888777777766554422 222223455666666777888999999999999999999998
Q ss_pred hhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce-EEEEecCCCccchhhhc------cCCCcceeeec
Q psy11552 324 GVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG-CVTSLYAGEDFGKLALV------NNAPRLIITSM 392 (714)
Q Consensus 324 ~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~-~v~~l~~Gd~FGElaLl------~~~pr~atv~A 392 (714)
- .+....|.||+.|+++||.|..||||.+|.+.|...+++ ...+|.+|++|||++++ ++..|+|+|++
T Consensus 328 L-klk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dDg~t~~~~L~~G~~FGEisIlni~g~~~gNRRtanvrS 402 (536)
T KOG0500|consen 328 L-KLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADDGVTVFVTLKAGSVFGEISILNIKGNKNGNRRTANVRS 402 (536)
T ss_pred H-HhcceeeCCCCeEEecCcccceEEEEEccEEEEEecCCcEEEEEecCCceeeeeEEEEEcCcccCCcceeeeee
Confidence 8 567778999999999999999999999999999887664 78899999999999987 35567777765
No 32
>cd04445 DEP_PLEK1 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 1-like proteins. Pleckstrin 1 plays a role in cell spreading and reorganization of actin cytoskeleton in platelets and leukocytes. Its activity is highly regulated by phosphorylation, mainly by protein kinase C. Pleckstrin-like proteins contain a central DEP domain, flanked by 2 PH (pleckstrin homology) domains.
Probab=99.04 E-value=2.2e-10 Score=97.76 Aligned_cols=63 Identities=22% Similarity=0.299 Sum_probs=51.0
Q ss_pred HHHhhcCC-CCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhccccccc
Q psy11552 49 RTLLLNDE-SGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 49 ~~~~~~~~-~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv 115 (714)
...|.+.. +...++.+... ++|++||+|++.||||+++.. +.+|+||++||+.|++.|.+..|
T Consensus 6 v~sMqDp~~GIk~~~~~~~~--tv~~hcftGsdVVdWLv~~~~--v~~r~EAl~las~Ll~eGyL~P~ 69 (99)
T cd04445 6 YLSMKDPEKGIKELNLEKDK--KVFNHCFTGSCVIDWLVSNQS--VRNRQEGLMLASSLLNEGYLQPA 69 (99)
T ss_pred HHHHhCcccchhhhhHHHhh--ccccceecccHHHHHHHHhhc--ccchHHHHHHHHHHHHcCCeeec
Confidence 33444444 33333444444 999999999999999999998 89999999999999999999998
No 33
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=98.98 E-value=2.2e-09 Score=110.55 Aligned_cols=90 Identities=18% Similarity=0.266 Sum_probs=80.3
Q ss_pred HHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce---EEEEecCCCccchh
Q psy11552 302 YEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG---CVTSLYAGEDFGKL 378 (714)
Q Consensus 302 ~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~---~v~~l~~Gd~FGEl 378 (714)
.+.|..+++|+.|+++++..|+. ....++|++|++|+++|++++.+|+|++|.|.++....+ .+..+++|++||+.
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~-~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~~~~~~i~~~~~g~~~g~~ 84 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMR-GAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQDRETTLAILRPVSTFILA 84 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHh-hcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCCCceEEEEEeCCCchhhhH
Confidence 45778899999999999999999 556779999999999999999999999999999875433 78889999999999
Q ss_pred hhccCCCcceeeec
Q psy11552 379 ALVNNAPRLIITSM 392 (714)
Q Consensus 379 aLl~~~pr~atv~A 392 (714)
+++.+.|+.++++|
T Consensus 85 ~~~~~~~~~~~~~A 98 (236)
T PRK09392 85 AVVLDAPYLMSART 98 (236)
T ss_pred HHhCCCCCceEEEE
Confidence 99999998887766
No 34
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.95 E-value=5e-09 Score=126.95 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=81.4
Q ss_pred HHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce---EEEEecCCCccchh
Q psy11552 302 YEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG---CVTSLYAGEDFGKL 378 (714)
Q Consensus 302 ~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~---~v~~l~~Gd~FGEl 378 (714)
.+.+.++++|++++++.+.+|+. .+...+|++|+.|+.|||.++.+|||.+|.|++.....+ .+..+++|++|||+
T Consensus 373 ~~~l~~~~lF~~~s~~~l~~L~~-~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~~~~e~~l~~l~~Gd~FGE~ 451 (823)
T PLN03192 373 LPVVEKVYLFKGVSREILLLLVT-KMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDSEGEKERVVGTLGCGDIFGEV 451 (823)
T ss_pred HHHHhhCcchhcCCHHHHHHHHH-hhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEecCCcceeeEEccCCCEecch
Confidence 34677899999999999999999 667779999999999999999999999999999874432 68899999999999
Q ss_pred hhccCCCcceeeec
Q psy11552 379 ALVNNAPRLIITSM 392 (714)
Q Consensus 379 aLl~~~pr~atv~A 392 (714)
+++.+.|+++|++|
T Consensus 452 ~~l~~~p~~~t~ra 465 (823)
T PLN03192 452 GALCCRPQSFTFRT 465 (823)
T ss_pred HHhcCCCCCCeEEE
Confidence 99999999999988
No 35
>KOG1113|consensus
Probab=98.94 E-value=4.8e-10 Score=116.91 Aligned_cols=92 Identities=32% Similarity=0.434 Sum_probs=82.9
Q ss_pred HHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCccchhh
Q psy11552 300 QIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLA 379 (714)
Q Consensus 300 ~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~FGEla 379 (714)
-..+.|.++|++++|...++..+++. .....|++|+.|+.||++|+.||+|.+|+|+|....++++..++.||+|||+|
T Consensus 237 My~~~l~s~pil~~l~k~er~kv~da-l~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~v~vkl~~~dyfge~a 315 (368)
T KOG1113|consen 237 MYEPFLESVPILESLEKLERAKVADA-LGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRDGVEVKLKKGDYFGELA 315 (368)
T ss_pred hhhhhhhcchhhHHHHHHHHHhhhcc-cceeeccCCceEEeccCCcceEEEecccccchhhccCCeEEEechhhhcchHH
Confidence 34557778999999999999999995 45559999999999999999999999999999887766545999999999999
Q ss_pred hccCCCcceeeec
Q psy11552 380 LVNNAPRLIITSM 392 (714)
Q Consensus 380 Ll~~~pr~atv~A 392 (714)
|+.+.||.|||.|
T Consensus 316 l~~~~pr~Atv~a 328 (368)
T KOG1113|consen 316 LLKNLPRAATVVA 328 (368)
T ss_pred HHhhchhhceeec
Confidence 9999999999998
No 36
>PLN02868 acyl-CoA thioesterase family protein
Probab=98.81 E-value=2.1e-08 Score=112.03 Aligned_cols=91 Identities=22% Similarity=0.231 Sum_probs=80.2
Q ss_pred HHHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc---eEEEEecCCCcc
Q psy11552 299 EQIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK---GCVTSLYAGEDF 375 (714)
Q Consensus 299 ~~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~---~~v~~l~~Gd~F 375 (714)
+.+.+.|.++++|++|+++++.+|+. .+...+|++|++||++||+.+.+|+|++|.|+|+.... ..+..+++|++|
T Consensus 4 ~~~~~~L~~~~~F~~L~~~~l~~l~~-~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~ge~~l~~l~~Gd~f 82 (413)
T PLN02868 4 ESVVEFLGSVPLLQRLPSSSLKKIAE-VVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEESRPEFLLKRYDYF 82 (413)
T ss_pred HHHHHHHhcCcccccCCHHHHHHHHH-hceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCCcEEEEEeCCCCEe
Confidence 45667788999999999999999999 56777999999999999999999999999999988542 267889999999
Q ss_pred chhhhccCCCcceeeec
Q psy11552 376 GKLALVNNAPRLIITSM 392 (714)
Q Consensus 376 GElaLl~~~pr~atv~A 392 (714)
|+. +.+.++.++++|
T Consensus 83 G~~--l~~~~~~~~~~A 97 (413)
T PLN02868 83 GYG--LSGSVHSADVVA 97 (413)
T ss_pred ehh--hCCCCcccEEEE
Confidence 985 678889999887
No 37
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=98.80 E-value=3.4e-08 Score=88.41 Aligned_cols=82 Identities=30% Similarity=0.419 Sum_probs=68.3
Q ss_pred cCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc----eEEEEecCCCccchhhhcc--C
Q psy11552 310 PLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK----GCVTSLYAGEDFGKLALVN--N 383 (714)
Q Consensus 310 ~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~----~~v~~l~~Gd~FGElaLl~--~ 383 (714)
+|.++++..+..++. ......+++|++|+++|++.+++|+|.+|.+.++.... ..+..+++|+.||+.+++. .
T Consensus 1 ~f~~l~~~~~~~l~~-~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~ 79 (120)
T smart00100 1 LFKNLDAEELRELAD-ALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTNSR 79 (120)
T ss_pred CcCCCCHHHHHHHHH-hceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccCCC
Confidence 589999999999999 55667899999999999999999999999999987632 1788899999999999983 3
Q ss_pred CCcceeeec
Q psy11552 384 APRLIITSM 392 (714)
Q Consensus 384 ~pr~atv~A 392 (714)
.+...++.|
T Consensus 80 ~~~~~~~~~ 88 (120)
T smart00100 80 RAASATAVA 88 (120)
T ss_pred cccceEEEE
Confidence 344444443
No 38
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=98.73 E-value=6.1e-08 Score=86.27 Aligned_cols=82 Identities=34% Similarity=0.487 Sum_probs=73.2
Q ss_pred cCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc----eEEEEecCCCccchhhhccCCC
Q psy11552 310 PLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK----GCVTSLYAGEDFGKLALVNNAP 385 (714)
Q Consensus 310 ~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~----~~v~~l~~Gd~FGElaLl~~~p 385 (714)
+|+.|+++.+..|+. ......+++|++|+.+|++.+.+|+|.+|.+.++.... ..+..+.+|++||+.+++.+.+
T Consensus 1 ~f~~l~~~~~~~l~~-~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~ 79 (115)
T cd00038 1 LFSGLDDEELEELAD-ALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGP 79 (115)
T ss_pred CcccCCHHHHHHHHh-hceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCC
Confidence 589999999999999 46666899999999999999999999999999988653 2788899999999999998888
Q ss_pred cceeeec
Q psy11552 386 RLIITSM 392 (714)
Q Consensus 386 r~atv~A 392 (714)
+..+++|
T Consensus 80 ~~~~~~a 86 (115)
T cd00038 80 RSATVRA 86 (115)
T ss_pred CCceEEE
Confidence 8888877
No 39
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=98.68 E-value=8.2e-08 Score=96.11 Aligned_cols=86 Identities=31% Similarity=0.410 Sum_probs=74.6
Q ss_pred hCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhhc
Q psy11552 306 LHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLALV 381 (714)
Q Consensus 306 ~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaLl 381 (714)
...+.|..++......++. ......+++|++||.+||+++.+|+|.+|.|.++.... | .+..++||++||+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~ 81 (214)
T COG0664 3 KENPLLNLLPSELLELLAL-KLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALL 81 (214)
T ss_pred ccccccccCCHHHHHHHhh-hceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHh
Confidence 3456777788888888874 66777999999999999999999999999999998654 2 77889999999999999
Q ss_pred cCCCcceeeec
Q psy11552 382 NNAPRLIITSM 392 (714)
Q Consensus 382 ~~~pr~atv~A 392 (714)
.+.||+++++|
T Consensus 82 ~~~~~~~~~~a 92 (214)
T COG0664 82 GGDPRSASAVA 92 (214)
T ss_pred cCCCccceEEE
Confidence 99899999887
No 40
>KOG0499|consensus
Probab=98.62 E-value=3.4e-08 Score=108.41 Aligned_cols=94 Identities=22% Similarity=0.342 Sum_probs=81.2
Q ss_pred HHHHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce--EEEEecCCCcc
Q psy11552 298 LEQIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG--CVTSLYAGEDF 375 (714)
Q Consensus 298 ~~~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~--~v~~l~~Gd~F 375 (714)
+.--+..|+++.+|++.+...+++++- -...+.|-+|+.|++.||.|..||||..|.|.|.-..++ ++.+|.+|.+|
T Consensus 522 i~V~y~~lSKVqLFq~Cdr~mirDmll-rLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGGp~~~~Vl~tL~~GsVF 600 (815)
T KOG0499|consen 522 IDVNYSILSKVQLFQGCDRQMIRDMLL-RLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGGPDGTKVLVTLKAGSVF 600 (815)
T ss_pred EEeehhhhhHHHHhhhhHHHHHHHHHH-HhhceeecCCceeeecccccceeEEeecceEEEecCCCCCEEEEEeccccee
Confidence 334567788899999999999999988 456667889999999999999999999999999875444 88999999999
Q ss_pred chhhhc---cCCCcceeeec
Q psy11552 376 GKLALV---NNAPRLIITSM 392 (714)
Q Consensus 376 GElaLl---~~~pr~atv~A 392 (714)
||++|+ .+..|+|+|+|
T Consensus 601 GEISLLaigG~nRRTAnV~a 620 (815)
T KOG0499|consen 601 GEISLLAIGGGNRRTANVVA 620 (815)
T ss_pred eeeeeeeecCCCccchhhhh
Confidence 999987 45678999987
No 41
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=98.62 E-value=1.5e-07 Score=94.89 Aligned_cols=80 Identities=21% Similarity=0.324 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhhccCC-Cc
Q psy11552 312 HHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLALVNNA-PR 386 (714)
Q Consensus 312 ~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaLl~~~-pr 386 (714)
+.++++++..+++ .+...+|++|++|+.+|++.+.+|+|++|.|+++.... | .+..+++|++||+.+++.+. ++
T Consensus 6 ~~~~~~~~~~l~~-~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~ 84 (211)
T PRK11753 6 KPQTDPTLEWFLS-HCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQER 84 (211)
T ss_pred CCCCHHHHHHHHh-hCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCc
Confidence 6789999999999 66777999999999999999999999999999987532 2 67889999999999998764 45
Q ss_pred ceeeec
Q psy11552 387 LIITSM 392 (714)
Q Consensus 387 ~atv~A 392 (714)
+++++|
T Consensus 85 ~~~~~a 90 (211)
T PRK11753 85 SAWVRA 90 (211)
T ss_pred eEEEEE
Confidence 556654
No 42
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=98.60 E-value=7.8e-08 Score=82.67 Aligned_cols=63 Identities=29% Similarity=0.502 Sum_probs=58.1
Q ss_pred EeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCce----EEEEecCCCccchhhhccCCCcceeeec
Q psy11552 330 AHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKG----CVTSLYAGEDFGKLALVNNAPRLIITSM 392 (714)
Q Consensus 330 ~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~----~v~~l~~Gd~FGElaLl~~~pr~atv~A 392 (714)
++|++|++|+++|++++++|+|++|.+.+.....+ .+..+++|++||+.+++.+.|+.++++|
T Consensus 2 ~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a 68 (91)
T PF00027_consen 2 KTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSPFTVIA 68 (91)
T ss_dssp EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBSSEEEE
T ss_pred eEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccEEEEEE
Confidence 57999999999999999999999999999886543 5789999999999999999999999988
No 43
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=98.51 E-value=2e-07 Score=102.94 Aligned_cols=92 Identities=25% Similarity=0.302 Sum_probs=81.8
Q ss_pred HHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCccchhh
Q psy11552 300 QIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLA 379 (714)
Q Consensus 300 ~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~FGEla 379 (714)
.+.+++.++|+|+.|+++++..|... +...+|.+|++|+.-|.+..++|+|.+|.|+|...+...+..+..||.||-.+
T Consensus 4 ~~~~Fl~~~pPF~~L~~eel~~L~~~-l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g~v~~~~~~gdlFg~~~ 82 (610)
T COG2905 4 EPDQFLQQHPPFSQLPAEELEQLMGA-LEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGGEVLDRLAAGDLFGFSS 82 (610)
T ss_pred CHHHHHhcCCCcccCCHHHHHHHHhh-hccccccCCCeeecCCCCcceeEEEEeceeeEEcCCCeeeeeeccCccccchh
Confidence 45679999999999999999999995 45559999999999999999999999999999888776899999999999999
Q ss_pred hccCCCcceeeec
Q psy11552 380 LVNNAPRLIITSM 392 (714)
Q Consensus 380 Ll~~~pr~atv~A 392 (714)
|+.+.+....++|
T Consensus 83 l~~~~~~~~~~~a 95 (610)
T COG2905 83 LFTELNKQRYMAA 95 (610)
T ss_pred hcccCCCcceeEe
Confidence 9988766555554
No 44
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=98.37 E-value=1.1e-06 Score=90.25 Aligned_cols=78 Identities=26% Similarity=0.295 Sum_probs=63.1
Q ss_pred HhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhh
Q psy11552 305 LLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLAL 380 (714)
Q Consensus 305 L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaL 380 (714)
+.+..+|..|+++++..|.........|++|++|+++||+.+++|+|.+|.|.++..+. | .+..+.||++||+.++
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~ 94 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAI 94 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccc
Confidence 44545555799999999998433345799999999999999999999999999998643 2 6777899999998766
Q ss_pred cc
Q psy11552 381 VN 382 (714)
Q Consensus 381 l~ 382 (714)
..
T Consensus 95 ~~ 96 (235)
T PRK11161 95 GS 96 (235)
T ss_pred cC
Confidence 43
No 45
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=98.37 E-value=5.2e-07 Score=92.48 Aligned_cols=71 Identities=11% Similarity=0.137 Sum_probs=60.3
Q ss_pred HHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhhccCCCcceeeec
Q psy11552 321 ELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLALVNNAPRLIITSM 392 (714)
Q Consensus 321 ~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaLl~~~pr~atv~A 392 (714)
+|++ ....+.|++|++|+.+||+.+.+|+|++|.|.++..+. | .+..+.||++||+.+++.+.|+++++.|
T Consensus 26 ~i~~-~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A 100 (226)
T PRK10402 26 DVSA-DTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHETKAVQA 100 (226)
T ss_pred HHHh-hhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCCccEEE
Confidence 4555 34555899999999999999999999999999987532 2 6788999999999999999988888876
No 46
>KOG2968|consensus
Probab=98.29 E-value=9.4e-07 Score=101.44 Aligned_cols=111 Identities=28% Similarity=0.461 Sum_probs=95.9
Q ss_pred ecCCCEEEccCCcCCeEEEEEEeEEEEEEeC---------ce-EEEEecCCCccchhhhccCCCcceeeec---------
Q psy11552 332 PRKGEILFHQGDEGKSWYIIIQGSVDVVIYG---------KG-CVTSLYAGEDFGKLALVNNAPRLIITSM--------- 392 (714)
Q Consensus 332 ~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~---------~~-~v~~l~~Gd~FGElaLl~~~pr~atv~A--------- 392 (714)
-+..++|.+||+.+.+.|++.+|.+.++... .+ .+..++||+++|-++++.|.|-..+++|
T Consensus 391 ~keitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~s~~~~~~~~~~f~v~pG~ivgyla~lt~e~S~~tirArsdt~v~~i 470 (1158)
T KOG2968|consen 391 EKEITIIVEQGARDVGLYYIIKGSLSVYQSMYDVSGNLVLAGMLLFVVGPGEIVGYLAILTNEPSFITIRARSDTRVLFI 470 (1158)
T ss_pred ccceEEEEecccccceeeEEeecceeeeehhcccccccccccceEEEecCCceechhhhhcCCcceEEEEEecceEEEEe
Confidence 3566788999999999999999999886531 11 6788999999999999999999989887
Q ss_pred ------------------------------------------------ccccCCCCceEEEEEeCeEEEEee----ccee
Q psy11552 393 ------------------------------------------------VFHQGDEGKSWYIIIQGSVDVVIY----GKGC 420 (714)
Q Consensus 393 ------------------------------------------------i~~~g~~~~~~YiI~~G~~~~~~~----~~~~ 420 (714)
+++|||.+|..|+|++|.++.+.. .+..
T Consensus 471 srs~l~~~~~~~p~I~L~ia~svl~~lsp~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i 550 (1158)
T KOG2968|consen 471 SRSDLERFLDAEPLIYLRIAHSVLRRLSPFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEI 550 (1158)
T ss_pred eHHHHHHHHHhCceEEEehhhHHHHhcCHHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchh
Confidence 789999999999999999987764 2345
Q ss_pred eeeecCCCccchhhhhcCCchh
Q psy11552 421 VTSLYAGEDFGKLALVNNAPSY 442 (714)
Q Consensus 421 v~~l~~gd~fge~~~L~~~p~~ 442 (714)
+..++.||.+|+++.+.+.|+.
T Consensus 551 ~~EygrGd~iG~~E~lt~~~R~ 572 (1158)
T KOG2968|consen 551 VGEYGRGDLIGEVEMLTKQPRA 572 (1158)
T ss_pred hhhccCcceeehhHHhhcCCcc
Confidence 6799999999999999998776
No 47
>cd04440 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=98.23 E-value=7.7e-07 Score=77.07 Aligned_cols=29 Identities=17% Similarity=0.273 Sum_probs=27.5
Q ss_pred hhHHHHHHHHHhhccccccc---------ceeeEeecC
Q psy11552 96 RQITTGMWQALLEEGVIYHG---------KISCFFFSE 124 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv---------~~~y~f~~~ 124 (714)
|++||.+||.|||.|+|||| ++||||+.|
T Consensus 56 R~eAv~~gq~Ll~~gii~HV~~~h~F~D~~lfYrF~~d 93 (93)
T cd04440 56 REEAVILGVGLCNNGFMHHVLEKSEFKDEPLLFRFYAD 93 (93)
T ss_pred HHHHHHHHHHHHhCCCEEecCCCcCcCCcCeEEEEecC
Confidence 78999999999999999999 899999876
No 48
>cd04436 DEP_fRgd2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGAP (GTPase-activator protein) Rgd2-like proteins. Rgd2-like proteins share a common domain architecture, containing, beside the RhoGAP domain, a DEP and a FCH (Fes/CIP4 homology) domain. Yeast Rgd2 is a GAP protein for Cdc42 and Rho5.
Probab=98.23 E-value=1.6e-06 Score=73.09 Aligned_cols=59 Identities=27% Similarity=0.462 Sum_probs=51.3
Q ss_pred cccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCC-CccccCc-Cceeee
Q psy11552 143 TIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNG-EQAFRDK-CILYNF 203 (714)
Q Consensus 143 ~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~-~~~F~d~-~~~Yrf 203 (714)
.+|.+|++|+|+|+||.++-. +.++..|...||.|++.|+|.+|.+ -..|.++ ..+|++
T Consensus 24 Gty~nt~sG~~Iv~~L~~n~~--~~s~~~aE~fGQdLv~~gfir~~g~vG~~F~nSs~~~Yqw 84 (84)
T cd04436 24 GTYQNTSSGSEIVSWLQENMP--EKDLDAAEAFGQDLLNQGFLRLVGGVGSTFVNSSKFQYQW 84 (84)
T ss_pred ccccCcccHHHHHHHHHHcCC--CCCHHHHHHHHHHHHhCchHHHhcccCcceecCccceecC
Confidence 367999999999999999988 7999999999999999999999975 4578777 566653
No 49
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=98.22 E-value=3.4e-06 Score=84.49 Aligned_cols=64 Identities=23% Similarity=0.320 Sum_probs=53.5
Q ss_pred eEEeecCCCEEEccCC--cCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhhccCCCcceeeec
Q psy11552 328 FEAHPRKGEILFHQGD--EGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLALVNNAPRLIITSM 392 (714)
Q Consensus 328 ~~~~~~~G~iI~~qGd--~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaLl~~~pr~atv~A 392 (714)
....|++|++||++|| +.+.+|+|++|.|.++.... | .+..++|||+||+.++. +.++++++.|
T Consensus 7 ~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~-~~~~~~~~~A 76 (202)
T PRK13918 7 DTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALA-GAERAYFAEA 76 (202)
T ss_pred ceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhc-CCCCCceEEE
Confidence 4557999999999999 67999999999999988543 2 78888999999997665 5677777766
No 50
>KOG3572|consensus
Probab=98.10 E-value=3.5e-06 Score=99.43 Aligned_cols=76 Identities=20% Similarity=0.210 Sum_probs=68.0
Q ss_pred CccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEeecCCCCchhhhHHHHh
Q psy11552 58 GTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFFSETETIPMERIYYSL 137 (714)
Q Consensus 58 ~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~~~~~~~~~~~~~~~~ 137 (714)
..+.++.+|- +.|..||+|+|.|.||+.+...
T Consensus 1286 ~klq~~~wh~--~~~e~CF~gsE~VnWL~n~f~g---------------------------------------------- 1317 (1701)
T KOG3572|consen 1286 IKLQYQGWHP--DPNELCFRGSEWVNWLQNYFAG---------------------------------------------- 1317 (1701)
T ss_pred CceeeecccC--CcchhhhhhHHHHHHHHHhhhh----------------------------------------------
Confidence 5677899999 8899999999999999888774
Q ss_pred hcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHH--HHhcCcceecCCCccccCcCceeeeccCccC
Q psy11552 138 YSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQA--LLEEGVIYHVNGEQAFRDKCILYNFWQDKEG 209 (714)
Q Consensus 138 ~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~--Ll~~g~i~hv~~~~~F~d~~~~Yrf~~d~~~ 209 (714)
..+|++|+.+||. ++..|+.+|+...|.|.|+..||++..|+..
T Consensus 1318 ----------------------------I~Tre~AikygqK~~e~qlglf~hal~kh~fldG~YfY~ivpeys~ 1363 (1701)
T KOG3572|consen 1318 ----------------------------IETREKAIKYGQKTNEKQLGLFHHALMKHVFLDGLYFYYIVPEYSK 1363 (1701)
T ss_pred ----------------------------hhhHHHHHHHHhhhhHHHhhhhhhhhhcceeccceEEEEecccccc
Confidence 5899999999999 8899999999999999999999999998754
No 51
>cd04436 DEP_fRgd2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGAP (GTPase-activator protein) Rgd2-like proteins. Rgd2-like proteins share a common domain architecture, containing, beside the RhoGAP domain, a DEP and a FCH (Fes/CIP4 homology) domain. Yeast Rgd2 is a GAP protein for Cdc42 and Rho5.
Probab=97.92 E-value=1.9e-05 Score=66.70 Aligned_cols=49 Identities=24% Similarity=0.320 Sum_probs=44.7
Q ss_pred ccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhccccccc
Q psy11552 63 RKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 63 r~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv 115 (714)
|..-+ -||.+||.|+|.|+||.++-. +.+++.|-.+||.|++.|+|.+|
T Consensus 19 kvPil--Gty~nt~sG~~Iv~~L~~n~~--~~s~~~aE~fGQdLv~~gfir~~ 67 (84)
T cd04436 19 KVPIL--GTYQNTSSGSEIVSWLQENMP--EKDLDAAEAFGQDLLNQGFLRLV 67 (84)
T ss_pred eeccc--ccccCcccHHHHHHHHHHcCC--CCCHHHHHHHHHHHHhCchHHHh
Confidence 33445 699999999999999999999 59999999999999999999987
No 52
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=97.86 E-value=2.3e-05 Score=77.83 Aligned_cols=51 Identities=27% Similarity=0.489 Sum_probs=45.0
Q ss_pred CCEEEccCCcCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhhccCCC
Q psy11552 335 GEILFHQGDEGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLALVNNAP 385 (714)
Q Consensus 335 G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaLl~~~p 385 (714)
|++||++||+.+++|+|++|.|+++.... | .+..++||++||+.+++.+.+
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~ 55 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHR 55 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCC
Confidence 78999999999999999999999988533 2 578899999999999987764
No 53
>KOG3571|consensus
Probab=97.86 E-value=1.6e-05 Score=86.44 Aligned_cols=56 Identities=29% Similarity=0.346 Sum_probs=52.9
Q ss_pred CCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhccccccc
Q psy11552 57 SGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 57 ~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv 115 (714)
+--||||.|.- -+.++.|+|+|+||||++|-+. ..+|.+|-.++..||..|+|.|+
T Consensus 406 GLeirdRmWlK--ItIPnafiGsDlVdWL~~hVeg-~~~RkeAR~yAs~lLk~g~IrHt 461 (626)
T KOG3571|consen 406 GLEIRDRMWLK--ITIPNAFIGSDLVDWLVDHVEG-LHERKEARKYASRLLKAGYIRHT 461 (626)
T ss_pred cceeccceeee--eecchhhcchhHHHHHHHHhhh-hhhHHHHHHHHHHHHHhCchhhc
Confidence 66799999976 7999999999999999999996 99999999999999999999998
No 54
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=97.79 E-value=5.9e-05 Score=77.53 Aligned_cols=64 Identities=20% Similarity=0.258 Sum_probs=50.8
Q ss_pred cceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc-e---EEEEecCCCccchhhhccCCCcceeeec
Q psy11552 326 VMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK-G---CVTSLYAGEDFGKLALVNNAPRLIITSM 392 (714)
Q Consensus 326 ~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~---~v~~l~~Gd~FGElaLl~~~pr~atv~A 392 (714)
.....+|++|++||.+||+++++|+|++|.|+++.... | .+..+.+|++||+. .+.++..++.|
T Consensus 37 ~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~~~~~~~~~~A 104 (230)
T PRK09391 37 VASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---SGSTHRFTAEA 104 (230)
T ss_pred eeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---CCCcCCeEEEE
Confidence 45677899999999999999999999999999987432 2 67778999999964 34455555544
No 55
>KOG3542|consensus
Probab=97.78 E-value=8.1e-05 Score=83.13 Aligned_cols=74 Identities=34% Similarity=0.552 Sum_probs=66.3
Q ss_pred HhcCCCCCCCHHHHHHHHHHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEE
Q psy11552 285 RQIGKPLDRTSEDLEQIYEELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVV 359 (714)
Q Consensus 285 ~~~~~~~~r~~~~~~~i~~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~ 359 (714)
.+.+||.-++++++...+..|.+...|++|-...++.|++...++ +++...++|+.|+.+.+|||+++|+|-|.
T Consensus 19 ~~~k~~~~~t~~~~rN~~~~lh~ld~~snl~~~~lk~l~~~arye-r~~g~~ilf~~~~var~wyillsgsv~v~ 92 (1283)
T KOG3542|consen 19 SLIKPPHLRTPDDIRNVYEQLHQLDTFSNLFIGPLKALCKTARYE-RHPGQYILFRDGDVARSWYILLSGSVFVE 92 (1283)
T ss_pred hccCCcccCChhhhhhHHHHHhhhhhhhhhhhhhHHHhhhhhhhh-cCCCceEEecccchhhheeeeeccceEee
Confidence 345889999999999999999999999999999999999955555 77788899999999999999999999874
No 56
>cd04437 DEP_Epac DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in Epac-like proteins. Epac (exchange proteins directly activated by cAMP) proteins are GEFs (guanine-nucleotide-exchange factors) for the small GTPases, Rap1 and Rap2. They are directly regulated by cyclic AMP, a second messenger that plays a role in the control of diverse cellular processes, such as cell adhesion and insulin secretion. Epac-like proteins share a common domain architecture, containing RasGEF, DEP and CAP-effector (cAMP binding) domains. The DEP domain is involved in membrane localization.
Probab=97.76 E-value=2e-05 Score=72.45 Aligned_cols=35 Identities=37% Similarity=0.504 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHhhccccccc---------ceeeEeecCCCCchh
Q psy11552 96 RQITTGMWQALLEEGVIYHG---------KISCFFFSETETIPM 130 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv---------~~~y~f~~~~~~~~~ 130 (714)
|++|+.+||.|||.|+|+|| ..||||+.|+.+...
T Consensus 50 R~eAv~lgq~Ll~~gvi~HV~~~h~F~D~~~fYrF~~d~~~~~~ 93 (125)
T cd04437 50 RSQAVGMWQVLLEEGVLLHVDQELHFQDKYQFYRFSDDECSPAP 93 (125)
T ss_pred HHHHHHHHHHHHhCCCeEEeCCcCccccCCeeEEECCccCCccc
Confidence 78999999999999999999 789999998776644
No 57
>cd04441 DEP_2_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
Probab=97.72 E-value=1.9e-05 Score=67.52 Aligned_cols=26 Identities=31% Similarity=0.487 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHhhccccccc---------ceeeEe
Q psy11552 96 RQITTGMWQALLEEGVIYHG---------KISCFF 121 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv---------~~~y~f 121 (714)
|++|+.+||.|||.|+|+|| .+||||
T Consensus 51 R~eAv~lgq~Ll~~gii~HV~~~h~F~D~~~fYrF 85 (85)
T cd04441 51 RREAVQLCRRLLEHGIIQHVSNKHHFFDSNLLYQF 85 (85)
T ss_pred HHHHHHHHHHHHHCCCEEecCCCCCccCCCeeeeC
Confidence 78999999999999999999 777876
No 58
>KOG3571|consensus
Probab=97.65 E-value=2.9e-05 Score=84.48 Aligned_cols=64 Identities=28% Similarity=0.432 Sum_probs=55.4
Q ss_pred cccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCcCceeeeccCccC
Q psy11552 143 TIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDKCILYNFWQDKEG 209 (714)
Q Consensus 143 ~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~~~~Yrf~~d~~~ 209 (714)
.++++.|+|+++||||+++-+.+ .+|.+|-.++-.||..|+|.|+-++..|-.. .+|-| .|+|.
T Consensus 417 ItIPnafiGsDlVdWL~~hVeg~-~~RkeAR~yAs~lLk~g~IrHtVnK~TFtEq-CYYVf-GD~c~ 480 (626)
T KOG3571|consen 417 ITIPNAFIGSDLVDWLVDHVEGL-HERKEARKYASRLLKAGYIRHTVNKLTFTEQ-CYYVF-GDECS 480 (626)
T ss_pred eecchhhcchhHHHHHHHHhhhh-hhHHHHHHHHHHHHHhCchhhcccceeeeee-eEEEe-ccccc
Confidence 34699999999999999998877 9999999999999999999999999999754 45667 35544
No 59
>cd04443 DEP_GPR155 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in GPR155-like proteins. GRP155-like proteins, also known as PGR22, contain an N-terminal permease domain, a central transmembrane region and a C-terminal DEP domain. They are orphan receptors of the class B G protein-coupled receptors. Their function is unknown.
Probab=97.64 E-value=3e-05 Score=66.26 Aligned_cols=26 Identities=27% Similarity=0.260 Sum_probs=23.5
Q ss_pred hhHHHHHHHHHhhccccccc---------ceeeEe
Q psy11552 96 RQITTGMWQALLEEGVIYHG---------KISCFF 121 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv---------~~~y~f 121 (714)
|++|+.+||.||+.|+|+|| .+||||
T Consensus 49 R~eAv~lg~~Ll~~G~i~HV~~~~~F~D~~~~YrF 83 (83)
T cd04443 49 RGEAVLYGRRLLQGGVLQHITNEHHFRDENLLYRF 83 (83)
T ss_pred HHHHHHHHHHHHHCCCEEecCCCcCEecCCeeEeC
Confidence 67999999999999999999 677776
No 60
>cd04442 DEP_1_DEP6 DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in DEP6-like proteins. DEP6 proteins contain two DEP and a PDZ domain. Their function is unknown.
Probab=97.63 E-value=3.1e-05 Score=65.94 Aligned_cols=20 Identities=30% Similarity=0.461 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHhhccccccc
Q psy11552 96 RQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv 115 (714)
|++|+.+||+||+.|+|+||
T Consensus 47 R~eAv~lgq~Ll~~gvi~HV 66 (82)
T cd04442 47 RETAIKIMQKLLDHSIIHHV 66 (82)
T ss_pred HHHHHHHHHHHHHCCCEEec
Confidence 78999999999999999999
No 61
>cd04439 DEP_1_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and by the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=97.58 E-value=4.1e-05 Score=65.15 Aligned_cols=26 Identities=35% Similarity=0.434 Sum_probs=22.8
Q ss_pred hhHHHHHHHHHhhccccccc---------ceeeEe
Q psy11552 96 RQITTGMWQALLEEGVIYHG---------KISCFF 121 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv---------~~~y~f 121 (714)
|++|+.+||.||+.|+|+|| .+||||
T Consensus 47 r~eAv~lg~~Ll~~G~i~HV~~~h~FkD~~~fYrF 81 (81)
T cd04439 47 PEEGVNLGQALLENGIIHHVSDKHQFKNEQVLYRF 81 (81)
T ss_pred HHHHHHHHHHHHHCCCEEecCCCCCEecCCeEEeC
Confidence 57999999999999999999 566665
No 62
>KOG0501|consensus
Probab=97.42 E-value=0.00017 Score=79.72 Aligned_cols=88 Identities=20% Similarity=0.291 Sum_probs=71.9
Q ss_pred HHHhCCccCCCCCHHHHHHHHhhcceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCccchhhhcc
Q psy11552 303 EELLHLKPLHHLSNSVRRELAGVVMFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLALVN 382 (714)
Q Consensus 303 ~~L~~~~~F~~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~FGElaLl~ 382 (714)
+....+|.|.--++.-++.|+-..+ ..+..||+.|++-|+.-++++||++|+.+|...++ +|+.||.||+||..---.
T Consensus 548 KVFnEHpaFRLASDGCLRaLAm~f~-~~H~APGDLlYHtGESvDaLcFvVsGSLEVIQDDE-VVAILGKGDVFGD~FWK~ 625 (971)
T KOG0501|consen 548 KVFNEHPAFRLASDGCLRALAMEFQ-TNHCAPGDLLYHTGESVDALCFVVSGSLEVIQDDE-VVAILGKGDVFGDEFWKE 625 (971)
T ss_pred hhhccCcceeeccchhHHHHHHHHH-hccCCCcceeeecCCccceEEEEEecceEEeecCc-EEEEeecCccchhHHhhh
Confidence 3455699999999999999988444 44899999999999999999999999999988777 899999999999864432
Q ss_pred CC--Ccceeeec
Q psy11552 383 NA--PRLIITSM 392 (714)
Q Consensus 383 ~~--pr~atv~A 392 (714)
+. ...|.|+|
T Consensus 626 ~t~~qs~ANVRA 637 (971)
T KOG0501|consen 626 NTLGQSAANVRA 637 (971)
T ss_pred hhhhhhhhhhhh
Confidence 22 23456665
No 63
>KOG2968|consensus
Probab=97.22 E-value=0.00014 Score=84.19 Aligned_cols=66 Identities=24% Similarity=0.418 Sum_probs=58.7
Q ss_pred ceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeC----ceEEEEecCCCccchhhhccCCCcceeeec
Q psy11552 327 MFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYG----KGCVTSLYAGEDFGKLALVNNAPRLIITSM 392 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~----~~~v~~l~~Gd~FGElaLl~~~pr~atv~A 392 (714)
....++.+|+.+++|||..++.|+|+.|.+.-.... ...+..++.||.+|++.++.+.||..|+.|
T Consensus 508 ldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~~~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~A 577 (1158)
T KOG2968|consen 508 LDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQSGGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMA 577 (1158)
T ss_pred cceEEeccccHHHhcCCccCcEEEEecCeehhhhhccCccchhhhhccCcceeehhHHhhcCCccceEEE
Confidence 455589999999999999999999999999876652 227889999999999999999999999998
No 64
>cd04435 DEP_fRom2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) Rom2-like proteins. Rom2-like proteins share a common domain architecture, containing, beside the RhoGEF domain, a DEP, a PH (pleckstrin homology) and a CNH domain. Rom2, a yeast GEF for Rho1 and Rho2, is involved in mediating stress response via the Ras-cAMP pathway and also plays a role in mediating resistance to sphingolipid disturbances.
Probab=97.17 E-value=0.00036 Score=57.89 Aligned_cols=70 Identities=16% Similarity=0.191 Sum_probs=61.6
Q ss_pred hHHHHhhcCCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCcceecCCCccccCc-Cceeee
Q psy11552 132 RIYYSLYSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHVNGEQAFRDK-CILYNF 203 (714)
Q Consensus 132 ~~~~~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~i~hv~~~~~F~d~-~~~Yrf 203 (714)
+|....+.++.-.|++.|+|+|+||-+..--. ..+|.=|.-+|+.|-.+.++|-|+-+|.++|+ .-.|+|
T Consensus 12 ~I~~~~~~K~gl~Y~~aFtG~~aV~~i~~ii~--t~DRnlALllgRsLdaQkfFhdV~y~hrLrDs~~evY~F 82 (82)
T cd04435 12 KIPLGDHTKDGITYRNSFTGKDAVTTIQGIIR--TSDRNLALLLGRSLDAQKFFHDVTYDHRLRDSVDEVYRF 82 (82)
T ss_pred hccccccccCCeecCcccCcHHHHHHHHHHHh--cccHHHHHHHHHHHHHhHhhhhcccCCccccChhhhhcC
Confidence 44445677888899999999999999999887 68999999999999999999999988999998 567766
No 65
>cd04446 DEP_DEPDC4 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC4-like proteins. DEPDC4 is a DEP domain containing protein of unknown function.
Probab=97.14 E-value=0.00016 Score=63.19 Aligned_cols=28 Identities=21% Similarity=0.159 Sum_probs=23.3
Q ss_pred HhhcCCCcccccccchhhHHHHHHhhCC
Q psy11552 136 SLYSGGRTIARRCASGSELVDWLMSLAP 163 (714)
Q Consensus 136 ~~~~~~~~~~~~cf~G~e~vdwl~~~~~ 163 (714)
+.+....++|++||+|+|+||||+++..
T Consensus 15 kdRr~~lk~y~~CF~GsEaVDwL~~~l~ 42 (95)
T cd04446 15 KKRRHNLKSYHDCFLGSEAVDVVLAHLM 42 (95)
T ss_pred cceeeeceecccccchHHHHHHHHHHHh
Confidence 3445557899999999999999999874
No 66
>cd04444 DEP_PLEK2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in pleckstrin 2-like proteins. Pleckstrin 2 is found in a wide variety of cell types, which suggest a more general role in signaling than pleckstrin 1. Pleckstrin-like proteins contain a central DEP domain, flanked by 2 PH (pleckstrin homology) domains.
Probab=97.02 E-value=0.00032 Score=62.46 Aligned_cols=23 Identities=35% Similarity=0.543 Sum_probs=19.9
Q ss_pred hcCCCcccccccchhhHHHHHHh
Q psy11552 138 YSGGRTIARRCASGSELVDWLMS 160 (714)
Q Consensus 138 ~~~~~~~~~~cf~G~e~vdwl~~ 160 (714)
+....++|++||+|+|+||||++
T Consensus 21 ~r~~~k~y~~CF~Gse~VDWLv~ 43 (109)
T cd04444 21 NMEQGSTYKKTFLGSALVDWLIS 43 (109)
T ss_pred hhhccccccccccchHHHHHHHH
Confidence 34467899999999999999986
No 67
>cd04448 DEP_PIKfyve DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol phosphate kinase) domain. PIKfyve-like proteins are important phosphatidylinositol (3)-monophosphate (PtdIns(3)P)-5-kinases, producing PtdIns(3,5)P2, which plays a major role in multivesicular body (MVB) sorting and control of retrograde traffic from the vacuole back to the endosome and/or Golgi. PIKfyve itself has been shown to be play a role in regulating early-endosome-to-trans-Golgi network (TGN) retrograde trafficking.
Probab=96.97 E-value=0.0004 Score=59.20 Aligned_cols=20 Identities=35% Similarity=0.282 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhhccccccc
Q psy11552 96 RQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv 115 (714)
|++|+.+||.||+.|+|+||
T Consensus 47 R~eAv~~gq~Ll~~g~i~hV 66 (81)
T cd04448 47 RVQAIAIGQALLDAGWIECV 66 (81)
T ss_pred HHHHHHHHHHHHHCCCEEec
Confidence 68999999999999999999
No 68
>cd04447 DEP_BRCC3 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in BBRC3-like proteins. BBRC3, also known as DEPDC1B, is a DEP containing protein of unknown function.
Probab=96.94 E-value=0.00031 Score=60.43 Aligned_cols=53 Identities=26% Similarity=0.258 Sum_probs=32.6
Q ss_pred HhhcCCCcccccccchhhHHHHHHhhCCCc-cCCHHHHHHHHHHHHhcCcceec
Q psy11552 136 SLYSGGRTIARRCASGSELVDWLMSLAPSL-AVSRQITTGMWQALLEEGVIYHV 188 (714)
Q Consensus 136 ~~~~~~~~~~~~cf~G~e~vdwl~~~~~~~-~~~r~~av~l~q~Ll~~g~i~hv 188 (714)
+.+....++|++||+|||+||||+..-.+- .-..+=--.-+-.|+..++..||
T Consensus 17 k~rR~~lr~y~~CF~gsEAVDwL~~~l~~n~~fg~~vtR~~av~l~qkll~~hV 70 (92)
T cd04447 17 RKHRQHFKSYENCFTASEAVDWLHELLRSNSNFGPEVTRQQTVQLLKKFLKNHV 70 (92)
T ss_pred HHHHHhcccCccccchHHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHcCC
Confidence 344556789999999999999999974311 11111122233445666666655
No 69
>cd04449 DEP_DEPDC5-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in DEPDC5-like proteins. DEPDC5, in human also known as KIAA0645, is a DEP domain containing protein of unknown function.
Probab=96.93 E-value=0.00057 Score=58.63 Aligned_cols=20 Identities=35% Similarity=0.479 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhhccccccc
Q psy11552 96 RQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv 115 (714)
|++|+.+||.|++.|+|+||
T Consensus 49 r~eAv~lgq~Ll~~g~I~hv 68 (83)
T cd04449 49 REEAVELGQELMNEGLIEHV 68 (83)
T ss_pred HHHHHHHHHHHHHCCCEEec
Confidence 68999999999999999999
No 70
>cd04438 DEP_dishevelled DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in dishevelled-like proteins. Dishevelled-like proteins play a key role in the transduction of the Wnt signal from the cell surface to the nucleus, which in turn is an important regulatory pathway for cellular development and growth. They contain an N-terminal DIX domain, a central PDZ domain, and a C-terminal DEP domain.
Probab=96.92 E-value=0.00061 Score=58.47 Aligned_cols=26 Identities=27% Similarity=0.314 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHhhccccccc--------ceeeEe
Q psy11552 96 RQITTGMWQALLEEGVIYHG--------KISCFF 121 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv--------~~~y~f 121 (714)
|++|+.+||.|++.|+|+|| +.||+|
T Consensus 49 R~eAv~~g~~Ll~~G~i~HV~~~h~F~d~~yy~~ 82 (84)
T cd04438 49 RREARKYASSLLKLGYIRHTVNKITFSEQCYYVF 82 (84)
T ss_pred HHHHHHHHHHHHHCCcEEecCCCccccCCeEEec
Confidence 68999999999999999999 666666
No 71
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=96.87 E-value=0.0047 Score=62.14 Aligned_cols=75 Identities=23% Similarity=0.354 Sum_probs=56.8
Q ss_pred ccccCCCCceEEEEEeCeEEEEeec----ceeeeeecCCCccchhhhhcCC-chhHHHHHHhhhheeeeeccccccCCce
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYG----KGCVTSLYAGEDFGKLALVNNA-PSYQLHMYLEQMAVYFTTTAPDIKGPRR 467 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~----~~~v~~l~~gd~fge~~~L~~~-p~~~~~~~l~~~~ly~~itv~ei~~p~~ 467 (714)
++.+|++.+.+|+|++|.+++.... ...+..+++||.||+.+++... +.. .++.+ .+++.
T Consensus 31 l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~--------------~~~~a-~~~~~ 95 (211)
T PRK11753 31 LIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERS--------------AWVRA-KTACE 95 (211)
T ss_pred EEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCce--------------EEEEE-cCcEE
Confidence 7899999999999999999988632 2345578899999999988764 333 45555 55667
Q ss_pred eeeecCCccccccch
Q psy11552 468 YKFRGPNRFQQITAN 482 (714)
Q Consensus 468 ~~~l~r~~f~~~tpn 482 (714)
++.++++.|......
T Consensus 96 v~~i~~~~~~~l~~~ 110 (211)
T PRK11753 96 VAEISYKKFRQLIQV 110 (211)
T ss_pred EEEEcHHHHHHHHHH
Confidence 778888888765433
No 72
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=96.82 E-value=0.0042 Score=61.87 Aligned_cols=71 Identities=27% Similarity=0.352 Sum_probs=56.9
Q ss_pred ccccCCCCceEEEEEeCeEEEEeecc----eeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYGK----GCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~~----~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
++.+|++++++|+|.+|.+.+..... ..+..+++||+||+.+++.++|+. .++.+ ..++..
T Consensus 34 l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~~~~~~--------------~~~~a-~~~~~~ 98 (214)
T COG0664 34 LFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLGGDPRS--------------ASAVA-LTDVEV 98 (214)
T ss_pred EEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhcCCCcc--------------ceEEE-cceEEE
Confidence 78999999999999999999988542 345578899999999999988776 56666 344666
Q ss_pred eeecCCcccc
Q psy11552 469 KFRGPNRFQQ 478 (714)
Q Consensus 469 ~~l~r~~f~~ 478 (714)
..+++..|..
T Consensus 99 ~~~~~~~~~~ 108 (214)
T COG0664 99 LEIPRKDFLE 108 (214)
T ss_pred EEecHHHHHH
Confidence 7777777654
No 73
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=96.81 E-value=0.0048 Score=63.39 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=59.0
Q ss_pred ccccCCCCceEEEEEeCeEEEEee---cceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCceee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIY---GKGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRYK 469 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~---~~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~~ 469 (714)
++++|+..+++|+|.+|.+++... +...+..+++|+.||+.+++...|.. .++.+ .+++..+
T Consensus 41 l~~~g~~~~~~~~v~~G~v~~~~~~~~~~~~i~~~~~g~~~g~~~~~~~~~~~--------------~~~~A-~~~~~~~ 105 (236)
T PRK09392 41 LITEGEPADFLFVVLDGLVELSASSQDRETTLAILRPVSTFILAAVVLDAPYL--------------MSART-LTRSRVL 105 (236)
T ss_pred EEeCCCccceEEEEEeCEEEEEEcCCCceEEEEEeCCCchhhhHHHhCCCCCc--------------eEEEE-cCceEEE
Confidence 789999999999999999999762 23445678899999999999888776 66776 5666777
Q ss_pred eecCCccccccc
Q psy11552 470 FRGPNRFQQITA 481 (714)
Q Consensus 470 ~l~r~~f~~~tp 481 (714)
.++...|.....
T Consensus 106 ~i~~~~~~~l~~ 117 (236)
T PRK09392 106 MIPAELVREAMS 117 (236)
T ss_pred EEeHHHHHHHHH
Confidence 888887765443
No 74
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=96.77 E-value=0.0012 Score=56.31 Aligned_cols=71 Identities=27% Similarity=0.346 Sum_probs=55.9
Q ss_pred ccccCCCCceEEEEEeCeEEEEeecc----eeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYGK----GCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~~----~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
|+++|+..+.+|+|++|.+.+..... ..+..+.+|+.||+.+++...|.. .++.+ .+++..
T Consensus 10 i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~--------------~~~~a-~~~~~~ 74 (91)
T PF00027_consen 10 IYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSP--------------FTVIA-LTDSEV 74 (91)
T ss_dssp EEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBS--------------SEEEE-SSSEEE
T ss_pred EEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccE--------------EEEEE-ccCEEE
Confidence 78999999999999999999988542 235688899999999999998776 56666 556666
Q ss_pred eeecCCcccc
Q psy11552 469 KFRGPNRFQQ 478 (714)
Q Consensus 469 ~~l~r~~f~~ 478 (714)
+.+++..|..
T Consensus 75 ~~i~~~~~~~ 84 (91)
T PF00027_consen 75 LRIPREDFLQ 84 (91)
T ss_dssp EEEEHHHHHH
T ss_pred EEEeHHHHHH
Confidence 6676655543
No 75
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=96.73 E-value=0.0047 Score=63.25 Aligned_cols=74 Identities=8% Similarity=0.108 Sum_probs=57.1
Q ss_pred ccccCCCCceEEEEEeCeEEEEee---c-ceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIY---G-KGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~---~-~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
++.+|++.+.+|+|.+|.+++..- | ...+..+.+|+.||+.+++...|.. .++.+ .+++..
T Consensus 42 l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~--------------~~~~A-~~~~~i 106 (226)
T PRK10402 42 IVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHET--------------KAVQA-IEECWC 106 (226)
T ss_pred EEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCC--------------ccEEE-eccEEE
Confidence 789999999999999999999772 2 2345578899999999988877765 56666 455666
Q ss_pred eeecCCccccccc
Q psy11552 469 KFRGPNRFQQITA 481 (714)
Q Consensus 469 ~~l~r~~f~~~tp 481 (714)
+.+++..+.....
T Consensus 107 ~~i~~~~~~~ll~ 119 (226)
T PRK10402 107 LALPMKDCRPLLL 119 (226)
T ss_pred EEEEHHHHHHHHh
Confidence 7788877765443
No 76
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=96.70 E-value=0.0072 Score=59.81 Aligned_cols=145 Identities=17% Similarity=0.141 Sum_probs=82.4
Q ss_pred ccccCCCCceEEEEEeCeEEEEee---c-ceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIY---G-KGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~---~-~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
++++|++.+++|+|++|.+++... + ...+..+++|+.||+.+++...+.. ...++.+ .+++..
T Consensus 4 l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~~~------------~~~~~~A-~~~~~v 70 (193)
T TIGR03697 4 IFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHRSD------------RFYHAVA-FTRVEL 70 (193)
T ss_pred eecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCCCc------------cceEEEE-ecceEE
Confidence 679999999999999999998772 2 2335678899999999998775321 0033444 455677
Q ss_pred eeecCCccccccchhhhhhhhhhh-HH---HhHhhh--hccccChhhHHHHHHHHHHHHHHHhh---------cCChHHH
Q psy11552 469 KFRGPNRFQQITANLDVFLRRFNE-IQ---YWVITE--ILLVTSLNKRVQILRKMIKLAAYCKE---------YRNINAL 533 (714)
Q Consensus 469 ~~l~r~~f~~~tpnI~~~i~~fn~-ls---~wV~~~--Il~~~~~~~R~~~i~~fI~iA~~~~~---------l~Nf~s~ 533 (714)
+.+++..|......-..+...+-. ++ ...... .+...++.+| +...++..+...-. +.-=+.-
T Consensus 71 ~~i~~~~~~~l~~~~p~l~~~~~~~l~~~l~~~~~~~~~l~~~~~~~R--la~~L~~l~~~~~~~~~~~~~~~~~~t~~~ 148 (193)
T TIGR03697 71 LAVPIEQVEKAIEEDPDLSMLLLQGLSSRILQTEMMIETLAHRDMGSR--LVSFLLILCRDFGVPGQRGVTIDLRLSHQA 148 (193)
T ss_pred EEeeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHHHHHhCCCCCCeEEecCCCCHHH
Confidence 778888877654332222222111 11 111111 2334455555 33334444443311 1112455
Q ss_pred HHHHHhcCchhhhchHHhh
Q psy11552 534 FAVLMGLSNVAVSRLSLTW 552 (714)
Q Consensus 534 ~aI~~gL~~~~V~RLk~Tw 552 (714)
.|=+.|.+-..|.|.-+.|
T Consensus 149 iA~~lG~tretvsR~l~~l 167 (193)
T TIGR03697 149 IAEAIGSTRVTITRLLGDL 167 (193)
T ss_pred HHHHhCCcHHHHHHHHHHH
Confidence 5666667667777743443
No 77
>PF00610 DEP: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); InterPro: IPR000591 This entry represents the DEP (Dishevelled, Egl-10 and Pleckstrin) domain, a globular domain of about 80 residues that is found in over 50 proteins involved in G-protein signalling pathways. It was named after the three proteins it was initially found in: Dishevelled (Dsh and Dvl), which play a key role in the transduction of the Wg/Wnt signal from the cell surface to the nucleus; it is a segment polarity protein required to establish coherent arrays of polarized cells and segments in embryos, and plays a role in wingless signalling. Egl-10, which regulates G-protein signalling in the central nervous system. Pleckstrin, the major substrate of protein kinase C in platelets; Pleckstrin contains two PH domains flanking the DEP domain. Mammalian regulators of G-protein signalling also contain these domains, and regulate signal transduction by increasing the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form. It has been proposed that the DEP domain could play a selective role in targeting DEP domain-containing proteins to specific subcellular membranous sites, perhaps even to specific G protein-coupled signaling pathways [, ]. Nuclear magnetic resonance spectroscopy has revealed that the DEP domain comprises a three-helix bundle, a beta-hairpin 'arm' composed of two beta-strands and two short beta-strands in the C-terminal region [].; GO: 0035556 intracellular signal transduction; PDB: 1UHW_A 1V3F_A 2YSR_A 2CSO_A 1W4M_A 2PBI_C 1O7F_A 2BYV_E 1FSH_A 3ML6_D ....
Probab=96.66 E-value=0.0014 Score=54.80 Aligned_cols=21 Identities=33% Similarity=0.431 Sum_probs=20.5
Q ss_pred chhHHHHHHHHHhhccccccc
Q psy11552 95 SRQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 95 ~~~~a~~~~~~l~~~g~~~hv 115 (714)
+|++|+.+||.||+.|+|+||
T Consensus 37 ~r~eA~~l~q~Ll~~g~i~~v 57 (74)
T PF00610_consen 37 DREEAVQLGQELLDHGFIEHV 57 (74)
T ss_dssp SHHHHHHHHHHHHHCTSEEES
T ss_pred CHHHHHHHHHHHHHCCCEEEC
Confidence 699999999999999999999
No 78
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=96.51 E-value=0.018 Score=57.57 Aligned_cols=139 Identities=16% Similarity=0.144 Sum_probs=77.7
Q ss_pred ccccCC--CCceEEEEEeCeEEEEeec---c-eeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCc
Q psy11552 393 VFHQGD--EGKSWYIIIQGSVDVVIYG---K-GCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPR 466 (714)
Q Consensus 393 i~~~g~--~~~~~YiI~~G~~~~~~~~---~-~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~ 466 (714)
++.+|+ +.+.+|+|++|.+.+.... . ..+..+.+||.||+.++.. .+.. .++.+ .+++
T Consensus 17 l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~~-~~~~--------------~~~~A-~~~~ 80 (202)
T PRK13918 17 ILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALAG-AERA--------------YFAEA-VTDS 80 (202)
T ss_pred EEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhcC-CCCC--------------ceEEE-cCce
Confidence 789999 6799999999999998732 2 3445678999999976653 4444 44555 4455
Q ss_pred eeeeecCCccc-cccchhh-hhhhhhhhHHHhHhhhhccccChhhHHHHHHHHHHHHHHHhh-cCC--------hHHHHH
Q psy11552 467 RYKFRGPNRFQ-QITANLD-VFLRRFNEIQYWVITEILLVTSLNKRVQILRKMIKLAAYCKE-YRN--------INALFA 535 (714)
Q Consensus 467 ~~~~l~r~~f~-~~tpnI~-~~i~~fn~ls~wV~~~Il~~~~~~~R~~~i~~fI~iA~~~~~-l~N--------f~s~~a 535 (714)
....+++..+. .....+. .+..+......++.... ..+.. .++...+++.+..--. ..+ =+.-.|
T Consensus 81 ~v~~i~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~--~~~~~--~Rla~~Ll~l~~~~~~~~~~~~~~~~~~t~~~iA 156 (202)
T PRK13918 81 RIDVLNPALMSAEDNLVLTQHLVRTLARAYESIYRLV--GQRLK--NRIAAALLELSDTPLATQEDSGETMIYATHDELA 156 (202)
T ss_pred EEEEEEHHHcChhhHHHHHHHHHHHHHHHHHHHHHHH--hCchH--HHHHHHHHHHHHHhCCCCCCCCeEEecCCHHHHH
Confidence 55666665552 1111111 11223333334443322 23333 4455556666654211 111 144556
Q ss_pred HHHhcCchhhhchHHh
Q psy11552 536 VLMGLSNVAVSRLSLT 551 (714)
Q Consensus 536 I~~gL~~~~V~RLk~T 551 (714)
-+.|.+-..|+|.-+.
T Consensus 157 ~~lG~tretvsR~l~~ 172 (202)
T PRK13918 157 AAVGSVRETVTKVIGE 172 (202)
T ss_pred HHhCccHHHHHHHHHH
Confidence 6667777777774333
No 79
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=96.21 E-value=0.028 Score=57.67 Aligned_cols=141 Identities=16% Similarity=0.149 Sum_probs=78.4
Q ss_pred ccccCCCCceEEEEEeCeEEEEeec---c-eeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYG---K-GCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~---~-~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
++.+|+..+++|+|.+|.+++.... . ..+..+.+||.||+.++.....+ .++.+ .+++..
T Consensus 48 l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~~~~~~~---------------~~~~a-~~~~~i 111 (235)
T PRK11161 48 LFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGQHP---------------SFAQA-LETSMV 111 (235)
T ss_pred eECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccccCCCCc---------------ceEEE-eccEEE
Confidence 8899999999999999999998742 2 23446689999998766543222 23344 345566
Q ss_pred eeecCCccccccchhhhhhhh--------hhhHHHhHhhhhccccChhhHHHHHHHHHHHHHHHhhc---------CChH
Q psy11552 469 KFRGPNRFQQITANLDVFLRR--------FNEIQYWVITEILLVTSLNKRVQILRKMIKLAAYCKEY---------RNIN 531 (714)
Q Consensus 469 ~~l~r~~f~~~tpnI~~~i~~--------fn~ls~wV~~~Il~~~~~~~R~~~i~~fI~iA~~~~~l---------~Nf~ 531 (714)
+.+++..|.........+... +..+..++.. +...++++| +...+...+...-.. .==+
T Consensus 112 ~~ip~~~f~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~R--la~~L~~l~~~~~~~~~~~~~~~~~lt~ 187 (235)
T PRK11161 112 CEIPFETLDDLSGKMPKLRQQIMRLMSGEIKGDQEMILL--LSKKNAEER--LAAFIYNLSRRFAQRGFSPREFRLTMTR 187 (235)
T ss_pred EEEEHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHH--HhCCCHHHH--HHHHHHHHHHHHhhcCCCCceeEccccH
Confidence 677787776543322222211 1112222211 223455555 333333444332111 0012
Q ss_pred HHHHHHHhcCchhhhchHHhhc
Q psy11552 532 ALFAVLMGLSNVAVSRLSLTWD 553 (714)
Q Consensus 532 s~~aI~~gL~~~~V~RLk~Tw~ 553 (714)
.-.|=+.|.+-..|.|+-+.|+
T Consensus 188 ~~iA~~lG~sr~tvsR~l~~l~ 209 (235)
T PRK11161 188 GDIGNYLGLTVETISRLLGRFQ 209 (235)
T ss_pred HHHHHHhCCcHHHHHHHHHHHH
Confidence 3556666777777888655554
No 80
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=96.14 E-value=0.034 Score=57.13 Aligned_cols=142 Identities=15% Similarity=0.109 Sum_probs=80.3
Q ss_pred ccccCCCCceEEEEEeCeEEEEee---cce-eeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIY---GKG-CVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~---~~~-~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
++.+|++.+++|+|++|.+++... +.. .+..+.+||.||+. ...+.. .++.+ ..++.+
T Consensus 49 l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~---~~~~~~--------------~~~~A-~~ds~v 110 (230)
T PRK09391 49 IYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLE---SGSTHR--------------FTAEA-IVDTTV 110 (230)
T ss_pred EECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceeccc---CCCcCC--------------eEEEE-cCceEE
Confidence 889999999999999999998872 232 34466799999964 222332 45555 455566
Q ss_pred eeecCCccccccchhhhhhhhh-hhHHHhHh---hh--hccccChhhHHHHHHHHHHHHHHHhh-----cCChHHHHHHH
Q psy11552 469 KFRGPNRFQQITANLDVFLRRF-NEIQYWVI---TE--ILLVTSLNKRVQILRKMIKLAAYCKE-----YRNINALFAVL 537 (714)
Q Consensus 469 ~~l~r~~f~~~tpnI~~~i~~f-n~ls~wV~---~~--Il~~~~~~~R~~~i~~fI~iA~~~~~-----l~Nf~s~~aI~ 537 (714)
+.++...|......-..+..++ ..++..+. .. .+...+.++| +...+++.+...-. +.-=+.-.|=+
T Consensus 111 ~~i~~~~f~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~R--la~~Ll~l~~~~g~~~~i~i~lt~~~IA~~ 188 (230)
T PRK09391 111 RLIKRRSLEQAAATDVDVARALLSLTAGGLRHAQDHMLLLGRKTAMER--VAAFLLEMDERLGGAGMMALPMSRRDIADY 188 (230)
T ss_pred EEEEHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHhCCCCEEEecCCHHHHHHH
Confidence 7788877765443332222221 12222111 11 1233444444 44445555443221 11113456666
Q ss_pred HhcCchhhhchHHhhcc
Q psy11552 538 MGLSNVAVSRLSLTWDK 554 (714)
Q Consensus 538 ~gL~~~~V~RLk~Tw~~ 554 (714)
.|.+-..|+|.-+.|++
T Consensus 189 lGisretlsR~L~~L~~ 205 (230)
T PRK09391 189 LGLTIETVSRALSQLQD 205 (230)
T ss_pred HCCCHHHHHHHHHHHHH
Confidence 77777778886556553
No 81
>smart00049 DEP Domain found in Dishevelled, Egl-10, and Pleckstrin. Domain of unknown function present in signalling proteins that contain PH, rasGEF, rhoGEF, rhoGAP, RGS, PDZ domains. DEP domain in Drosophila dishevelled is essential to rescue planar polarity defects and induce JNK signalling (Cell 94, 109-118).
Probab=95.86 E-value=0.0069 Score=50.96 Aligned_cols=21 Identities=38% Similarity=0.496 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHhhcccccccc
Q psy11552 96 RQITTGMWQALLEEGVIYHGK 116 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv~ 116 (714)
|++|+.+||.||+.|+|+||.
T Consensus 39 r~eA~~l~~~ll~~g~i~~v~ 59 (77)
T smart00049 39 REEAVHLGQLLLDEGLIHHVN 59 (77)
T ss_pred HHHHHHHHHHHHHCCCEEEeC
Confidence 689999999999999999993
No 82
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=95.77 E-value=0.016 Score=50.91 Aligned_cols=71 Identities=31% Similarity=0.458 Sum_probs=51.8
Q ss_pred ccccCCCCceEEEEEeCeEEEEeecc----eeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCcee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYGK----GCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRY 468 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~~----~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~ 468 (714)
++.+|+..+.+|+|.+|.+.+..... ..+..+++|+.||..+++.+.+.. .++.+ ..++..
T Consensus 28 l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~--------------~~~~a-~~~~~~ 92 (115)
T cd00038 28 IIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGPRS--------------ATVRA-LTDSEL 92 (115)
T ss_pred EEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCCCC--------------ceEEE-cCceEE
Confidence 67899999999999999999987542 445578899999999998655544 44444 345555
Q ss_pred eeecCCcccc
Q psy11552 469 KFRGPNRFQQ 478 (714)
Q Consensus 469 ~~l~r~~f~~ 478 (714)
..++.+.+..
T Consensus 93 ~~i~~~~~~~ 102 (115)
T cd00038 93 LVLPRSDFRR 102 (115)
T ss_pred EEEeHHHHHH
Confidence 5666655443
No 83
>cd04435 DEP_fRom2 DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) Rom2-like proteins. Rom2-like proteins share a common domain architecture, containing, beside the RhoGEF domain, a DEP, a PH (pleckstrin homology) and a CNH domain. Rom2, a yeast GEF for Rho1 and Rho2, is involved in mediating stress response via the Ras-cAMP pathway and also plays a role in mediating resistance to sphingolipid disturbances.
Probab=95.54 E-value=0.024 Score=47.33 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhcccccccceeeEee
Q psy11552 43 RAGWVLRTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHGKISCFFF 122 (714)
Q Consensus 43 ~~~~~l~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv~~~y~f~ 122 (714)
+-+.++|..+ ...+|.... -.|++.|+|.|+||-|..--. ..+|.-|.-+|++|--..++|-|..=.|++
T Consensus 4 ~VA~~fr~~I------~~~~~~K~g--l~Y~~aFtG~~aV~~i~~ii~--t~DRnlALllgRsLdaQkfFhdV~y~hrLr 73 (82)
T cd04435 4 RVALQLRDKI------PLGDHTKDG--ITYRNSFTGKDAVTTIQGIIR--TSDRNLALLLGRSLDAQKFFHDVTYDHRLR 73 (82)
T ss_pred HHHHHHHHhc------cccccccCC--eecCcccCcHHHHHHHHHHHh--cccHHHHHHHHHHHHHhHhhhhcccCCccc
Confidence 3455666655 233444444 689999999999999999888 599999999999999999999984434444
Q ss_pred c
Q psy11552 123 S 123 (714)
Q Consensus 123 ~ 123 (714)
+
T Consensus 74 D 74 (82)
T cd04435 74 D 74 (82)
T ss_pred c
Confidence 3
No 84
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=95.48 E-value=0.012 Score=72.02 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=57.4
Q ss_pred ccccCCCCceEEEEEeCeEEEEeec---ceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCceee
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYG---KGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRYK 469 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~---~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~~ 469 (714)
|+.+|+.++.+|+|.+|.+++.... ...+..+.+||+|||.+++...|+. .++++ .+++..+
T Consensus 408 I~~qge~~~~lY~I~~G~V~i~~~~~~~e~~l~~l~~Gd~FGE~~~l~~~p~~--------------~t~ra-~~~s~ll 472 (823)
T PLN03192 408 VIMQNEAPDDVYIVVSGEVEIIDSEGEKERVVGTLGCGDIFGEVGALCCRPQS--------------FTFRT-KTLSQLL 472 (823)
T ss_pred EEECCCCCceEEEEEecEEEEEEecCCcceeeEEccCCCEecchHHhcCCCCC--------------CeEEE-cccEEEE
Confidence 7889999999999999999997632 2346689999999999999988877 66666 5666677
Q ss_pred eecCCcccc
Q psy11552 470 FRGPNRFQQ 478 (714)
Q Consensus 470 ~l~r~~f~~ 478 (714)
.+++++|..
T Consensus 473 ~l~~~~f~~ 481 (823)
T PLN03192 473 RLKTSTLIE 481 (823)
T ss_pred EEEHHHHHH
Confidence 778877754
No 85
>cd04450 DEP_RGS7-like DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in RGS (regulator of G-protein signaling) proteins of the subfamily R7. This subgroup contains RGS7, RGS6, RGS9 and RGS11. They share a common domain architecture, containing, beside the RGS domain, a DEP domain and a GGL (G-protein gamma subunit-like ) domain. RGS proteins are GTPase-activating (GAP) proteins of heterotrimeric G proteins by increasing the rate of GTP hydrolysis of the alpha subunit. The fungal homologs, like yeast Sst2, share a related common domain architecture, containing RGS and DEP domains. Sst2 has been identified as the principal regulator of mating pheromone signaling and recently the DEP domain of Sst2 has been shown to be necessary and sufficient to mediate receptor interaction.
Probab=95.42 E-value=0.011 Score=51.37 Aligned_cols=20 Identities=10% Similarity=0.019 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHhhccccccc
Q psy11552 96 RQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 96 ~~~a~~~~~~l~~~g~~~hv 115 (714)
|+||+.+||.||+.|+|+||
T Consensus 47 ~~EA~~~~~~ll~~gli~~V 66 (88)
T cd04450 47 PSEALEIAALFVKYGLITPV 66 (88)
T ss_pred HHHHHHHHHHHHHCCCEEEe
Confidence 68999999999999999999
No 86
>cd04371 DEP DEP domain, named after Dishevelled, Egl-10, and Pleckstrin, where this domain was first discovered. The function of this domain is still not clear, but it is believed to be important for the membrane association of the signaling proteins in which it is present. New studies show that the DEP domain of Sst2, a yeast RGS protein is necessary and sufficient for receptor interaction.
Probab=95.40 E-value=0.007 Score=51.34 Aligned_cols=21 Identities=43% Similarity=0.727 Sum_probs=18.4
Q ss_pred CCCcccccccchhhHHHHHHh
Q psy11552 140 GGRTIARRCASGSELVDWLMS 160 (714)
Q Consensus 140 ~~~~~~~~cf~G~e~vdwl~~ 160 (714)
...+.|++||+|+|+||||++
T Consensus 20 ~~~~~~~~~F~G~e~v~WL~~ 40 (81)
T cd04371 20 YHLKTYPNCFTGSELVDWLLD 40 (81)
T ss_pred ECCEECCceeEcHHHHHHHHH
Confidence 346888999999999999986
No 87
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=95.06 E-value=0.028 Score=49.60 Aligned_cols=45 Identities=40% Similarity=0.620 Sum_probs=38.3
Q ss_pred ccccCCCCceEEEEEeCeEEEEeec----ceeeeeecCCCccchhhhhc
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYG----KGCVTSLYAGEDFGKLALVN 437 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~----~~~v~~l~~gd~fge~~~L~ 437 (714)
++++|++.+++|+|.+|.+.+.... ...+..+.+|+.||+.+++.
T Consensus 28 l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~ 76 (120)
T smart00100 28 IIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLT 76 (120)
T ss_pred EEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhcc
Confidence 7889999999999999999998742 33556788999999999883
No 88
>KOG0498|consensus
Probab=94.56 E-value=0.026 Score=66.48 Aligned_cols=50 Identities=26% Similarity=0.391 Sum_probs=41.6
Q ss_pred ccccCCCCceEEEEEeCeEEEEeecc---eeeeeecCCCccc-hhhhhcC-Cchh
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYGK---GCVTSLYAGEDFG-KLALVNN-APSY 442 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~~---~~v~~l~~gd~fg-e~~~L~~-~p~~ 442 (714)
|++||++.+.+|+|..|.++++.... ..+..|++||+|| |...+.. -|..
T Consensus 453 iireGd~v~~myFI~rG~le~~~~~~g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t 507 (727)
T KOG0498|consen 453 IIREGDPVTDMYFIVRGSLESITTDGGGFFVVAILGPGDFFGEELLTWCLDLPQT 507 (727)
T ss_pred EEecCCccceeEEEEeeeEEEEEccCCceEEEEEecCCCccchHHHHHHhcCCCC
Confidence 89999999999999999999988553 4566999999999 7776666 3554
No 89
>KOG0499|consensus
Probab=94.04 E-value=0.044 Score=61.63 Aligned_cols=70 Identities=24% Similarity=0.332 Sum_probs=54.8
Q ss_pred ccccCCCCceEEEEEeCeEEEEeec--ceeeeeecCCCccchhhhhcC---CchhHHHHHHhhhheeeeeccccccCCce
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYG--KGCVTSLYAGEDFGKLALVNN---APSYQLHMYLEQMAVYFTTTAPDIKGPRR 467 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~--~~~v~~l~~gd~fge~~~L~~---~p~~~~~~~l~~~~ly~~itv~ei~~p~~ 467 (714)
|-+.|+.|..+|||..|+|+|+-+. +.+..+|..|..|||.++|.- +.|. +++.+ .|-+-
T Consensus 561 VCkKGeiGkEMYIIk~GqvQVlGGp~~~~Vl~tL~~GsVFGEISLLaigG~nRRT--------------AnV~a-~Gf~n 625 (815)
T KOG0499|consen 561 VCKKGEIGKEMYIIKHGQVQVLGGPDGTKVLVTLKAGSVFGEISLLAIGGGNRRT--------------ANVVA-HGFAN 625 (815)
T ss_pred eeecccccceeEEeecceEEEecCCCCCEEEEEecccceeeeeeeeeecCCCccc--------------hhhhh-cccce
Confidence 5688999999999999999999743 455669999999999999874 3454 67777 67666
Q ss_pred eeeecCCccc
Q psy11552 468 YKFRGPNRFQ 477 (714)
Q Consensus 468 ~~~l~r~~f~ 477 (714)
.+++++.+..
T Consensus 626 LfvL~KkdLn 635 (815)
T KOG0499|consen 626 LFVLDKKDLN 635 (815)
T ss_pred eeEecHhHHH
Confidence 6777776543
No 90
>KOG0500|consensus
Probab=93.96 E-value=0.049 Score=60.22 Aligned_cols=46 Identities=33% Similarity=0.566 Sum_probs=40.1
Q ss_pred ccccCCCCceEEEEEeCeEEEEeeccee-eeeecCCCccchhhhhcC
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYGKGC-VTSLYAGEDFGKLALVNN 438 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~~~~-v~~l~~gd~fge~~~L~~ 438 (714)
|.+.|+.|..+|||+.|..+|+-+.+.. ...+..|++|||.++|+-
T Consensus 341 ICrKGdvgkEMyIVk~G~L~Vv~dDg~t~~~~L~~G~~FGEisIlni 387 (536)
T KOG0500|consen 341 ICRKGDVGKEMYIVKEGKLAVVADDGVTVFVTLKAGSVFGEISILNI 387 (536)
T ss_pred EEecCcccceEEEEEccEEEEEecCCcEEEEEecCCceeeeeEEEEE
Confidence 4578999999999999999999877644 458999999999999885
No 91
>PLN02868 acyl-CoA thioesterase family protein
Probab=93.01 E-value=0.13 Score=57.79 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=38.3
Q ss_pred ccccCCCCceEEEEEeCeEEEEeec---ceeeeeecCCCccchhhhhcCCchh
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYG---KGCVTSLYAGEDFGKLALVNNAPSY 442 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~---~~~v~~l~~gd~fge~~~L~~~p~~ 442 (714)
|+++|+..+.+|+|++|.+++.... ...+..+++|++||+. +.+.+..
T Consensus 42 I~~~Gd~~~~lyiI~~G~V~v~~~~~~ge~~l~~l~~Gd~fG~~--l~~~~~~ 92 (413)
T PLN02868 42 VVREGEPGDGLYFIWKGEAEVSGPAEEESRPEFLLKRYDYFGYG--LSGSVHS 92 (413)
T ss_pred EEeCCCcCceEEEEEeCEEEEEEECCCCcEEEEEeCCCCEeehh--hCCCCcc
Confidence 8899999999999999999998733 3456678999999975 4554443
No 92
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=92.09 E-value=0.15 Score=57.51 Aligned_cols=84 Identities=20% Similarity=0.201 Sum_probs=62.6
Q ss_pred ccccCCCCceEEEEEeCeEEEEeecceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCceeeeec
Q psy11552 393 VFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRYKFRG 472 (714)
Q Consensus 393 i~~~g~~~~~~YiI~~G~~~~~~~~~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~~~l~ 472 (714)
|+..|.+..++|+|.+|.|++...+.....++..||-||-.++....+.. ..-+++.+++++.++
T Consensus 41 ii~~~~p~~~l~vi~kG~vev~~~~g~v~~~~~~gdlFg~~~l~~~~~~~---------------~~~~aeedsl~y~lp 105 (610)
T COG2905 41 IIYAGSPVHYLYVIRKGVVEVRSDGGEVLDRLAAGDLFGFSSLFTELNKQ---------------RYMAAEEDSLCYLLP 105 (610)
T ss_pred eecCCCCcceeEEEEeceeeEEcCCCeeeeeeccCccccchhhcccCCCc---------------ceeEeeccceEEecC
Confidence 56677889999999999999998887777799999999999998885443 111114477889899
Q ss_pred CCccccccchhhhhhhhhh
Q psy11552 473 PNRFQQITANLDVFLRRFN 491 (714)
Q Consensus 473 r~~f~~~tpnI~~~i~~fn 491 (714)
+..|......-..+.++|.
T Consensus 106 ~s~F~ql~~~n~~f~~ff~ 124 (610)
T COG2905 106 KSVFMQLMEENPEFADFFL 124 (610)
T ss_pred HHHHHHHHHhCcHHHHHHH
Confidence 9877765555444544443
No 93
>KOG2378|consensus
Probab=90.54 E-value=0.062 Score=58.59 Aligned_cols=47 Identities=36% Similarity=0.723 Sum_probs=37.8
Q ss_pred CCCccchhhhccCCCcceeeec-----------------cccc-----------C------CCCceEEEEEeCeEEEEee
Q psy11552 371 AGEDFGKLALVNNAPRLIITSM-----------------VFHQ-----------G------DEGKSWYIIIQGSVDVVIY 416 (714)
Q Consensus 371 ~Gd~FGElaLl~~~pr~atv~A-----------------i~~~-----------g------~~~~~~YiI~~G~~~~~~~ 416 (714)
.||.||.+|++++.||.||++. |.++ | +..+..|.|++|+++++++
T Consensus 1 eGddfgklalvnd~praativl~ed~~~fl~vDk~~Fn~I~~~vEa~t~Rlk~~~edvlVle~~~~rYtVmsGtpEKILE 80 (573)
T KOG2378|consen 1 EGDDFGKLALVNDAPRAATIVLREDNCHFLRVDKHDFNRILHDVEANTVRLKEHGEDVLVLEKVSIRYTVMSGTPEKILE 80 (573)
T ss_pred CCcccchhccccccccccceeeecCCCcceeecHHHHHHHHHhhhhcceehhhcCcceeeeeccccceEEecCCHHHHHH
Confidence 5999999999999999999996 1111 1 2445589999999999987
Q ss_pred c
Q psy11552 417 G 417 (714)
Q Consensus 417 ~ 417 (714)
+
T Consensus 81 ~ 81 (573)
T KOG2378|consen 81 H 81 (573)
T ss_pred H
Confidence 6
No 94
>KOG0501|consensus
Probab=88.32 E-value=0.31 Score=54.87 Aligned_cols=71 Identities=20% Similarity=0.286 Sum_probs=52.8
Q ss_pred EEecCCCccchhhhccCCCcceeeecccccCCCCceEEEEEeCeEEEEeecceeeeeecCCCccchhhhhcC
Q psy11552 367 TSLYAGEDFGKLALVNNAPRLIITSMVFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLALVNN 438 (714)
Q Consensus 367 ~~l~~Gd~FGElaLl~~~pr~atv~Ai~~~g~~~~~~YiI~~G~~~~~~~~~~~v~~l~~gd~fge~~~L~~ 438 (714)
..|....+.-.+|+.....+.|----+++.|+..|.+.+|.+|+.+|+.+. .+|+.|++||.||..=--++
T Consensus 556 FRLASDGCLRaLAm~f~~~H~APGDLlYHtGESvDaLcFvVsGSLEVIQDD-EVVAILGKGDVFGD~FWK~~ 626 (971)
T KOG0501|consen 556 FRLASDGCLRALAMEFQTNHCAPGDLLYHTGESVDALCFVVSGSLEVIQDD-EVVAILGKGDVFGDEFWKEN 626 (971)
T ss_pred eeeccchhHHHHHHHHHhccCCCcceeeecCCccceEEEEEecceEEeecC-cEEEEeecCccchhHHhhhh
Confidence 344555555556665554444444448999999999999999999999876 77889999999998544333
No 95
>TIGR00869 sec62 protein translocation protein, Sec62 family. protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins has been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.
Probab=82.66 E-value=2.5 Score=43.23 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=45.1
Q ss_pred cchhhHHHHHHhhCCC-----------ccCCHHHHHHHHHHHHhcCcceecC------------------------CCcc
Q psy11552 149 ASGSELVDWLMSLAPS-----------LAVSRQITTGMWQALLEEGVIYHVN------------------------GEQA 193 (714)
Q Consensus 149 f~G~e~vdwl~~~~~~-----------~~~~r~~av~l~q~Ll~~g~i~hv~------------------------~~~~ 193 (714)
|-|+++|+||++.... -..+|++|..+++.|+..|++..|+ .++.
T Consensus 22 FRgkr~vraL~s~~y~~~~~k~~~~lp~i~~r~da~~~~~~Li~~~l~~R~~k~~~~~~~~~~kkp~k~~p~L~i~~~Q~ 101 (232)
T TIGR00869 22 FRVKRFVRALHSEEYANKSAKQPEIYPTIPSRLEAIEIFILLIKNQMVIRVDKLPSQECKEHKQKPSQDFPHLQVNNKQQ 101 (232)
T ss_pred eeHHHHHHHHhCcHhhhhcccCcccCCCCCCHHHHHHHHHHHHHcCCEEEEEecccccccccccCccCCCcceEeccccc
Confidence 7899999999974210 1367999999999999999998762 2446
Q ss_pred ccCcCceeeeccCc
Q psy11552 194 FRDKCILYNFWQDK 207 (714)
Q Consensus 194 F~d~~~~Yrf~~d~ 207 (714)
| |++.||-+..+.
T Consensus 102 F-d~d~~YvW~ye~ 114 (232)
T TIGR00869 102 F-EDDMYYVWNYNP 114 (232)
T ss_pred c-CCCceEEEEecC
Confidence 7 556789988874
No 96
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=81.31 E-value=13 Score=35.38 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=53.0
Q ss_pred CCCHHHHHHHHhhcceEEeecCCCEEEccCC-cCCeEEEEEEeEEEEEEeCceEEEEecCCCccch
Q psy11552 313 HLSNSVRRELAGVVMFEAHPRKGEILFHQGD-EGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGK 377 (714)
Q Consensus 313 ~Ls~~~l~~L~~~~~~~~~~~~G~iI~~qGd-~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~FGE 377 (714)
+.|..+.++|+.+........+|+.-.-||. +.+.+-++++|.+.|...+. .+..+.|-++..-
T Consensus 14 ~Vs~~~Fk~iv~~~~~i~~L~~~~~YAvE~~T~~drLSlLLsGr~~Vs~~g~-fLH~I~p~qFlDS 78 (153)
T PF04831_consen 14 KVSRQQFKKIVGCCCEIRTLKKGETYAVEGKTPIDRLSLLLSGRMRVSCDGR-FLHYIYPYQFLDS 78 (153)
T ss_pred CCCHHHHHHHHhhhceEEEecCCceeeecCCcccceEeEEEcCcEEEEECCE-eeEeecccccccC
Confidence 4588999999997677778999999999996 67999999999999998876 6777777655443
No 97
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=79.17 E-value=2.7 Score=33.89 Aligned_cols=44 Identities=14% Similarity=0.302 Sum_probs=33.6
Q ss_pred EeecCCCEEEccCCcCC-eEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 330 AHPRKGEILFHQGDEGK-SWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 330 ~~~~~G~iI~~qGd~g~-~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
..+++|+..-..-.+.. .+++|++|++.+...+ ....+++||.+
T Consensus 3 ~~~~pG~~~~~h~H~~~~e~~~vl~G~~~~~~~~--~~~~l~~Gd~~ 47 (71)
T PF07883_consen 3 VTLPPGGSIPPHRHPGEDEFFYVLSGEGTLTVDG--ERVELKPGDAI 47 (71)
T ss_dssp EEEETTEEEEEEEESSEEEEEEEEESEEEEEETT--EEEEEETTEEE
T ss_pred EEECCCCCCCCEECCCCCEEEEEEECCEEEEEcc--EEeEccCCEEE
Confidence 35788887766666666 9999999999998544 37788888753
No 98
>PRK11832 putative DNA-binding transcriptional regulator; Provisional
Probab=71.67 E-value=21 Score=36.11 Aligned_cols=52 Identities=10% Similarity=0.084 Sum_probs=37.7
Q ss_pred ceEEeecCCCEE-EccCCcCCeEEEEEEeEEEEEEeCce-EEEEecCCCccchhh
Q psy11552 327 MFEAHPRKGEIL-FHQGDEGKSWYIIIQGSVDVVIYGKG-CVTSLYAGEDFGKLA 379 (714)
Q Consensus 327 ~~~~~~~~G~iI-~~qGd~g~~~YiI~~G~V~V~~~~~~-~v~~l~~Gd~FGEla 379 (714)
.....+++|..+ +......+..|+|++|.|.+.. .++ .+.+..+.-.||-..
T Consensus 22 g~~~~~~~~~~~i~~~~~~~~~~~ll~~G~vsirr-~d~ll~~t~~aP~IlGl~~ 75 (207)
T PRK11832 22 GTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRR-EENVLIGITQAPYIMGLAD 75 (207)
T ss_pred CCeEecCCCcEEeccccCCCceEEEEEeceEEEEe-cCCeEEEeccCCeEeeccc
Confidence 455578899997 5555555779999999999964 444 666777777777543
No 99
>TIGR00869 sec62 protein translocation protein, Sec62 family. protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins has been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.
Probab=68.17 E-value=4.4 Score=41.47 Aligned_cols=44 Identities=14% Similarity=0.025 Sum_probs=36.3
Q ss_pred cccchhhHHHHHHhhCC-----------CcccchhHHHHHHHHHhhcccccccce
Q psy11552 74 RCASGSELVDWLMSLAP-----------SLAVSRQITTGMWQALLEEGVIYHGKI 117 (714)
Q Consensus 74 ~~f~g~e~v~wl~~~~~-----------~~~~~~~~a~~~~~~l~~~g~~~hv~~ 117 (714)
.=|-|.++|+||.+... -.+.+|++|..+++.|+..|+++-|..
T Consensus 20 eyFRgkr~vraL~s~~y~~~~~k~~~~lp~i~~r~da~~~~~~Li~~~l~~R~~k 74 (232)
T TIGR00869 20 DFFRVKRFVRALHSEEYANKSAKQPEIYPTIPSRLEAIEIFILLIKNQMVIRVDK 74 (232)
T ss_pred EEeeHHHHHHHHhCcHhhhhcccCcccCCCCCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 34889999999997432 136679999999999999999999844
No 100
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=64.28 E-value=11 Score=31.43 Aligned_cols=40 Identities=15% Similarity=0.369 Sum_probs=28.7
Q ss_pred cCCCEEEccCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 333 RKGEILFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 333 ~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
.+|..-..- ..+.+..|++|+|.+...+. ....+++||.|
T Consensus 15 ~pg~~~~~~--~~~E~~~vleG~v~it~~~G-~~~~~~aGD~~ 54 (74)
T PF05899_consen 15 TPGKFPWPY--PEDEFFYVLEGEVTITDEDG-ETVTFKAGDAF 54 (74)
T ss_dssp ECEEEEEEE--SSEEEEEEEEEEEEEEETTT-EEEEEETTEEE
T ss_pred CCceeEeeC--CCCEEEEEEEeEEEEEECCC-CEEEEcCCcEE
Confidence 455533332 23888899999999987644 56889999876
No 101
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=60.18 E-value=18 Score=33.40 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=42.4
Q ss_pred ceEEeecCCCEEEccCCc-CCeEEEEEEeEEEEEEeCceEEEEecCCCccchhh
Q psy11552 327 MFEAHPRKGEILFHQGDE-GKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLA 379 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd~-g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~FGEla 379 (714)
+....+++|..+-..-.+ ++...+|++|.+.+...+ ....+.+||++-.-+
T Consensus 45 ~~~v~~~~G~~~~~H~hp~~~~~~~Vl~G~~~~~~~g--~~~~l~~Gd~i~ip~ 96 (131)
T COG1917 45 VVLVTFEPGAVIPWHTHPLGEQTIYVLEGEGTVQLEG--EKKELKAGDVIIIPP 96 (131)
T ss_pred EEEEEECCCcccccccCCCcceEEEEEecEEEEEecC--CceEecCCCEEEECC
Confidence 455678999999888887 889999999999998884 477899999887643
No 102
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=59.98 E-value=20 Score=33.23 Aligned_cols=49 Identities=14% Similarity=0.088 Sum_probs=34.1
Q ss_pred ceEEeecCCCEEEccCCcCCeEEEEEEeEEEEE-EeCceEEEEecCCCccc
Q psy11552 327 MFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVV-IYGKGCVTSLYAGEDFG 376 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~-~~~~~~v~~l~~Gd~FG 376 (714)
+....+++|..+-..-.....+++|++|++.+. ..++ ....|++||+|-
T Consensus 37 ~~~~~l~pG~~~~~h~h~~~E~~yVL~G~~~~~~i~~g-~~~~L~aGD~i~ 86 (125)
T PRK13290 37 FHETTIYAGTETHLHYKNHLEAVYCIEGEGEVEDLATG-EVHPIRPGTMYA 86 (125)
T ss_pred EEEEEECCCCcccceeCCCEEEEEEEeCEEEEEEcCCC-EEEEeCCCeEEE
Confidence 455578899765432222246999999999998 4323 478899999865
No 103
>COG5422 ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms]
Probab=58.75 E-value=2.2 Score=50.52 Aligned_cols=63 Identities=25% Similarity=0.270 Sum_probs=37.2
Q ss_pred HHHHHHHHHhhcCCCCccccccccCCccccccccchhhHHHHHHhhCCCcccchhHHHHHHHHHhhccccccc
Q psy11552 43 RAGWVLRTLLLNDESGTLRDRKTSGGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMWQALLEEGVIYHG 115 (714)
Q Consensus 43 ~~~~~l~~~~~~~~~~~i~dr~~~~~~~~~~~~f~g~e~v~wl~~~~~~~~~~~~~a~~~~~~l~~~g~~~hv 115 (714)
+.+..++..+ .+-|++-.. -.|++.|.|+|+||-|+---. ..||.-|+-+|..|=-..++|-|
T Consensus 280 ~vA~efk~~l------~lg~~~Kdg--l~y~daFtGseavdvl~~Ii~--t~DrnLalL~grsldaqK~fhDV 342 (1175)
T COG5422 280 RVAVEFKMRL------QLGDHKKDG--LLYRDAFTGSEAVDVLMLIIR--TSDRNLALLNGRSLDAQKLFHDV 342 (1175)
T ss_pred HHHHHHHHHH------hhcchhhhh--HHHHhhhccchhhHhhhhhhh--ccccceeeeecccccchhhhhhh
Confidence 4444555544 233454444 578888888888888877666 35555555555555444444433
No 104
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=40.94 E-value=41 Score=32.54 Aligned_cols=46 Identities=22% Similarity=0.439 Sum_probs=32.3
Q ss_pred EccCCcCCeEEEEEEeEEEEEEeCce--EEEEecCCCccchhhhccCCC
Q psy11552 339 FHQGDEGKSWYIIIQGSVDVVIYGKG--CVTSLYAGEDFGKLALVNNAP 385 (714)
Q Consensus 339 ~~qGd~g~~~YiI~~G~V~V~~~~~~--~v~~l~~Gd~FGElaLl~~~p 385 (714)
++. ++++.||.+++|++.|...+++ ....|++||+|=--+=+.-.|
T Consensus 43 ~H~-~~tdE~FyqleG~~~l~v~d~g~~~~v~L~eGd~flvP~gvpHsP 90 (159)
T TIGR03037 43 FHD-DPGEEFFYQLKGEMYLKVTEEGKREDVPIREGDIFLLPPHVPHSP 90 (159)
T ss_pred ccc-CCCceEEEEEcceEEEEEEcCCcEEEEEECCCCEEEeCCCCCccc
Confidence 444 3489999999999999765544 467899999875444333344
No 105
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=40.66 E-value=65 Score=29.68 Aligned_cols=44 Identities=20% Similarity=0.404 Sum_probs=31.2
Q ss_pred EeecCCCEE-EccCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 330 AHPRKGEIL-FHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 330 ~~~~~G~iI-~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
..+++|+-+ .+.-..-+.+|+|++|+..|...+. ...+++||++
T Consensus 41 ~~v~pg~~~~~~~H~~~dE~~~Vl~G~g~v~~~~~--~~~v~~gd~~ 85 (127)
T COG0662 41 ILVKPGEEISLHHHHHRDEHWYVLEGTGKVTIGGE--EVEVKAGDSV 85 (127)
T ss_pred EEECCCcccCcccccCcceEEEEEeeEEEEEECCE--EEEecCCCEE
Confidence 356677764 3333346999999999999988754 5677777653
No 106
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=39.91 E-value=56 Score=30.76 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=36.8
Q ss_pred ceEEeecCCCEEEccCCc-CCeEEEEEEeEEEEEEeCce----EEEEecCCCccc
Q psy11552 327 MFEAHPRKGEILFHQGDE-GKSWYIIIQGSVDVVIYGKG----CVTSLYAGEDFG 376 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd~-g~~~YiI~~G~V~V~~~~~~----~v~~l~~Gd~FG 376 (714)
+....+.+|...-..-.+ +..+++|++|+..+...+.+ ....+.+||.|=
T Consensus 32 ~~~~~i~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~~~~~~~~~~~~l~~GD~~~ 86 (146)
T smart00835 32 AARVNLEPGGMLPPHYHPRATELLYVVRGEGRVGVVDPNGNKVYDARLREGDVFV 86 (146)
T ss_pred EEEEEecCCcCcCCeeCCCCCEEEEEEeCeEEEEEEeCCCCeEEEEEecCCCEEE
Confidence 556678899887666544 67899999999999775431 367788888653
No 107
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=39.47 E-value=59 Score=31.94 Aligned_cols=43 Identities=19% Similarity=0.332 Sum_probs=31.3
Q ss_pred eecCCCEEEcc-CCcCCeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 331 HPRKGEILFHQ-GDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 331 ~~~~G~iI~~q-Gd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
.+.+|...... -.++..+++|++|++.+...+. ...|++||++
T Consensus 113 ~~~pg~~~~~~~~h~~~E~~~Vl~G~~~~~~~~~--~~~l~~Gd~~ 156 (185)
T PRK09943 113 TYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQ--DYHLVAGQSY 156 (185)
T ss_pred EccCCCCcccccccCCcEEEEEEEeEEEEEECCE--EEEecCCCEE
Confidence 56677643211 2467899999999999987654 6789999875
No 108
>PRK11171 hypothetical protein; Provisional
Probab=38.67 E-value=55 Score=34.41 Aligned_cols=47 Identities=13% Similarity=0.244 Sum_probs=34.4
Q ss_pred ceEEeecCCCEEEccCC--cCCeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 327 MFEAHPRKGEILFHQGD--EGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd--~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
+....+++|...-.... .+..+++|++|++.+...+. ...|++||++
T Consensus 63 ~~~~~l~PG~~~~~~~h~~~~eE~~~VlsG~l~v~~~g~--~~~L~~GDsi 111 (266)
T PRK11171 63 QYLVEVEPGGGSDQPEPDEGAETFLFVVEGEITLTLEGK--THALSEGGYA 111 (266)
T ss_pred EEEEEECCCCcCCCCCCCCCceEEEEEEeCEEEEEECCE--EEEECCCCEE
Confidence 45667888875543333 24789999999999987654 6788999865
No 109
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=37.15 E-value=48 Score=32.61 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=28.7
Q ss_pred CcCCeEEEEEEeEEEEEEeCce--EEEEecCCCccchhh
Q psy11552 343 DEGKSWYIIIQGSVDVVIYGKG--CVTSLYAGEDFGKLA 379 (714)
Q Consensus 343 d~g~~~YiI~~G~V~V~~~~~~--~v~~l~~Gd~FGEla 379 (714)
++++.+|++++|++.|...++| ....+++||+|=--+
T Consensus 52 ~~tdE~FyqleG~~~l~v~d~g~~~~v~L~eGd~fllP~ 90 (177)
T PRK13264 52 DPGEEFFYQLEGDMYLKVQEDGKRRDVPIREGEMFLLPP 90 (177)
T ss_pred CCCceEEEEECCeEEEEEEcCCceeeEEECCCCEEEeCC
Confidence 5789999999999998875543 467899998874433
No 110
>PRK11171 hypothetical protein; Provisional
Probab=34.71 E-value=84 Score=33.02 Aligned_cols=48 Identities=8% Similarity=-0.015 Sum_probs=39.0
Q ss_pred cceEEeecCCCEEEc-cCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 326 VMFEAHPRKGEILFH-QGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 326 ~~~~~~~~~G~iI~~-qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
.+....+++|..+-. ........++|++|+..+...++ ...+.+||++
T Consensus 185 ~~~~~~l~PG~~~~~~~~~~~ee~i~Vl~G~~~~~~~~~--~~~l~~GD~i 233 (266)
T PRK11171 185 HVNIVTFEPGASIPFVETHVMEHGLYVLEGKGVYRLNND--WVEVEAGDFI 233 (266)
T ss_pred EEEEEEECCCCEEccCcCCCceEEEEEEeCEEEEEECCE--EEEeCCCCEE
Confidence 466678999998865 46677899999999999987654 7889999975
No 111
>TIGR03214 ura-cupin putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).
Probab=34.68 E-value=64 Score=33.80 Aligned_cols=47 Identities=23% Similarity=0.332 Sum_probs=33.5
Q ss_pred ceEEeecCCCEEE-ccCCcC-CeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 327 MFEAHPRKGEILF-HQGDEG-KSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 327 ~~~~~~~~G~iI~-~qGd~g-~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
++...+++|.-.- .....+ +.+.+|++|++.|...++ ...|++||++
T Consensus 60 ~~~v~l~pgg~~~~~~~~~g~ee~iyVl~G~l~v~~~g~--~~~L~~Gd~~ 108 (260)
T TIGR03214 60 QYIVEVHPGGGNTTGFGGEGIETFLFVISGEVNVTAEGE--THELREGGYA 108 (260)
T ss_pred EEEEEECCCCcCCCCCCCCceEEEEEEEeCEEEEEECCE--EEEECCCCEE
Confidence 5566777765332 122445 789999999999986654 6689999876
No 112
>COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=34.00 E-value=51 Score=31.68 Aligned_cols=46 Identities=22% Similarity=0.204 Sum_probs=34.4
Q ss_pred eecCCC--EEEccCCcCCeEEEEEEeEEEEEEeCceEEEEecCCCccchh
Q psy11552 331 HPRKGE--ILFHQGDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKL 378 (714)
Q Consensus 331 ~~~~G~--iI~~qGd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~FGEl 378 (714)
.++||. ..++--...+.|+.|++|+..+...+. ...|+|||+.|--
T Consensus 48 ~v~PG~~Ss~~H~Hs~edEfv~ILeGE~~l~~d~~--e~~lrpGD~~gFp 95 (161)
T COG3837 48 IVEPGGESSLRHWHSAEDEFVYILEGEGTLREDGG--ETRLRPGDSAGFP 95 (161)
T ss_pred EeCCCCccccccccccCceEEEEEcCceEEEECCe--eEEecCCceeecc
Confidence 555653 334444568999999999999977765 7789999998753
No 113
>PF11699 CENP-C_C: Mif2/CENP-C like; PDB: 2VPV_B.
Probab=30.50 E-value=61 Score=27.92 Aligned_cols=29 Identities=24% Similarity=0.408 Sum_probs=22.6
Q ss_pred CCeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 345 GKSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 345 g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
....|.|++|.|+|...+. -..+++|++|
T Consensus 33 ~~~vF~V~~G~v~Vti~~~--~f~v~~G~~F 61 (85)
T PF11699_consen 33 NTMVFYVIKGKVEVTIHET--SFVVTKGGSF 61 (85)
T ss_dssp EEEEEEEEESEEEEEETTE--EEEEETT-EE
T ss_pred cEEEEEEEeCEEEEEEcCc--EEEEeCCCEE
Confidence 4567889999999998876 5568888877
No 114
>PF09868 DUF2095: Uncharacterized protein conserved in archaea (DUF2095); InterPro: IPR018662 This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=28.45 E-value=68 Score=29.14 Aligned_cols=36 Identities=22% Similarity=0.524 Sum_probs=31.2
Q ss_pred ccccc---hhhHHHHHHhhCCCccCCHHHHHHHHHHHHhcCc
Q psy11552 146 RRCAS---GSELVDWLMSLAPSLAVSRQITTGMWQALLEEGV 184 (714)
Q Consensus 146 ~~cf~---G~e~vdwl~~~~~~~~~~r~~av~l~q~Ll~~g~ 184 (714)
++|=+ +-|.+|||.++|+ .+-+.|-.|-..|-+.|+
T Consensus 72 rRC~T~EEALEVInylek~GE---It~e~A~eLr~~L~~kGv 110 (128)
T PF09868_consen 72 RRCKTDEEALEVINYLEKRGE---ITPEEAKELRSILVKKGV 110 (128)
T ss_pred HHhCcHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHhhH
Confidence 66666 5678999999998 789999999999999987
No 115
>PF04831 Popeye: Popeye protein conserved region; InterPro: IPR006916 The Popeye (POP) family of proteins, is restricted to vertebrates and is preferentially expressed in developing and adult striated muscle. It is represented by a conserved region which includes three potential transmembrane domains []. The strong conservation of POP genes during evolution and their preferential expression in heart and skeletal muscle suggest that these novel proteins may have an important function in these tissues in vertebrates.; GO: 0016020 membrane
Probab=25.54 E-value=1.5e+02 Score=28.47 Aligned_cols=70 Identities=13% Similarity=0.107 Sum_probs=40.9
Q ss_pred CCCceEEEEEeCeEEEEeecceeeeeecCCCccchhhhhcCCchhHHHHHHhhhheeeeeccccccCCceeeeecCCccc
Q psy11552 398 DEGKSWYIIIQGSVDVVIYGKGCVTSLYAGEDFGKLALVNNAPSYQLHMYLEQMAVYFTTTAPDIKGPRRYKFRGPNRFQ 477 (714)
Q Consensus 398 ~~~~~~YiI~~G~~~~~~~~~~~v~~l~~gd~fge~~~L~~~p~~~~~~~l~~~~ly~~itv~ei~~p~~~~~l~r~~f~ 477 (714)
.+.|.+-++++|.+.|+.++ ......+|.++-..-+.-...+.. -+.|. +|..+ .+++.|..|.|++..
T Consensus 45 T~~drLSlLLsGr~~Vs~~g-~fLH~I~p~qFlDSPEW~s~~~s~--------~~~FQ-VTitA-~~~Cryl~W~R~kL~ 113 (153)
T PF04831_consen 45 TPIDRLSLLLSGRMRVSCDG-RFLHYIYPYQFLDSPEWESLRPSE--------DDKFQ-VTITA-EEDCRYLCWPREKLY 113 (153)
T ss_pred cccceEeEEEcCcEEEEECC-EeeEeecccccccChhhhccccCC--------CCeEE-EEEEE-cCCcEEEEEEHHHHH
Confidence 46689999999999999987 333333443333222221111111 12222 56666 678889999987654
Q ss_pred c
Q psy11552 478 Q 478 (714)
Q Consensus 478 ~ 478 (714)
.
T Consensus 114 ~ 114 (153)
T PF04831_consen 114 L 114 (153)
T ss_pred H
Confidence 3
No 116
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=23.84 E-value=1.6e+02 Score=32.47 Aligned_cols=48 Identities=17% Similarity=0.308 Sum_probs=34.5
Q ss_pred eEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc-e--EEEEecCCCcc
Q psy11552 328 FEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK-G--CVTSLYAGEDF 375 (714)
Q Consensus 328 ~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~-~--~v~~l~~Gd~F 375 (714)
....+.+|.+.--.-..+..+.++++|++.+...+. + ....|++||.|
T Consensus 70 ~~~~l~pG~~~~~HwH~~~E~~yVl~G~~~v~~~d~~g~~~~~~L~~GD~~ 120 (367)
T TIGR03404 70 VNMRLEPGAIRELHWHKEAEWAYVLYGSCRITAVDENGRNYIDDVGAGDLW 120 (367)
T ss_pred eEEEEcCCCCCCcccCCCceEEEEEeeEEEEEEEcCCCcEEEeEECCCCEE
Confidence 444678888765434456789999999999988542 2 33479999876
No 117
>PHA00672 hypothetical protein
Probab=23.21 E-value=1.3e+02 Score=27.75 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=31.0
Q ss_pred ceEEeecCCCEEEccCCcCCeEEEEEEeEEEEEEeCc
Q psy11552 327 MFEAHPRKGEILFHQGDEGKSWYIIIQGSVDVVIYGK 363 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd~g~~~YiI~~G~V~V~~~~~ 363 (714)
.++.+.++|.++.-.--.-+.+ ||.+|.+.|+..+.
T Consensus 49 ARei~IPkGt~LtG~~hkf~~~-ii~sG~itV~tdge 84 (152)
T PHA00672 49 ARTIRIPAGVALTGALIKVSTV-LIFSGHATVFIGGE 84 (152)
T ss_pred EEEEeccCceeeeeeeeEeeEE-EEecccEEEEeCCc
Confidence 5677899999998887788888 99999999998754
No 118
>PF01050 MannoseP_isomer: Mannose-6-phosphate isomerase; InterPro: IPR001538 Mannose-6-phosphate isomerase or phosphomannose isomerase (5.3.1.8 from EC) (PMI) is the enzyme that catalyses the interconversion of mannose-6-phosphate and fructose-6-phosphate. In eukaryotes PMI is involved in the synthesis of GDP-mannose, a constituent of N- and O-linked glycans and GPI anchors and in prokaryotes it participates in a variety of pathways, including capsular polysaccharide biosynthesis and D-mannose metabolism. PMI's belong to the cupin superfamily whose functions range from isomerase and epimerase activities involved in the modification of cell wall carbohydrates in bacteria and plants, to non-enzymatic storage proteins in plant seeds, and transcription factors linked to congenital baldness in mammals []. Three classes of PMI have been defined []. The type II phosphomannose isomerases are bifunctional enzymes 5.3.1.8 from EC. This entry covers the isomerase region of the protein []. The guanosine diphospho-D-mannose pyrophosphorylase region is described in another InterPro entry (see IPR005836 from INTERPRO).; GO: 0016779 nucleotidyltransferase activity, 0005976 polysaccharide metabolic process
Probab=23.21 E-value=1.8e+02 Score=27.85 Aligned_cols=46 Identities=15% Similarity=0.258 Sum_probs=33.9
Q ss_pred ceEEeecCCCEEEcc-CCcCCeEEEEEEeEEEEEEeCceEEEEecCCCc
Q psy11552 327 MFEAHPRKGEILFHQ-GDEGKSWYIIIQGSVDVVIYGKGCVTSLYAGED 374 (714)
Q Consensus 327 ~~~~~~~~G~iI~~q-Gd~g~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~ 374 (714)
.....+.||..+--| -...+..++|++|.+.|...+. ...+.+|+.
T Consensus 65 vkri~V~pG~~lSlq~H~~R~E~W~Vv~G~a~v~~~~~--~~~~~~g~s 111 (151)
T PF01050_consen 65 VKRITVNPGKRLSLQYHHHRSEHWTVVSGTAEVTLDDE--EFTLKEGDS 111 (151)
T ss_pred EEEEEEcCCCccceeeecccccEEEEEeCeEEEEECCE--EEEEcCCCE
Confidence 455578888888554 4456778889999999987654 667777654
No 119
>PF10037 MRP-S27: Mitochondrial 28S ribosomal protein S27; InterPro: IPR019266 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents a family of small ribosomal proteins possessing one of three conserved sequence blocks found in proteins that stimulate the dissociation of guanine nucleotides from G-proteins. This leaves open the possibility that they may be functional partners of GTP-binding ribosomal proteins [].
Probab=22.24 E-value=1.2e+02 Score=34.34 Aligned_cols=67 Identities=9% Similarity=-0.024 Sum_probs=47.7
Q ss_pred ceeeEeecCCCCc-------hh-----------hhHHHHhhc-CCCcccccccchhhHHHHHHhhCCCccCCHHHHHHHH
Q psy11552 116 KISCFFFSETETI-------PM-----------ERIYYSLYS-GGRTIARRCASGSELVDWLMSLAPSLAVSRQITTGMW 176 (714)
Q Consensus 116 ~~~y~f~~~~~~~-------~~-----------~~~~~~~~~-~~~~~~~~cf~G~e~vdwl~~~~~~~~~~r~~av~l~ 176 (714)
..+||||.-..++ ++ +.+...+.. ..-++|+++|+++=|+|.+++.+. -..|+.+.
T Consensus 87 ~~L~k~R~s~~~~~~~~~t~ha~vR~~l~~~~~~~~l~~L~n~~~yGiF~D~~s~n~Lmd~fl~~~~-----~~~A~~V~ 161 (429)
T PF10037_consen 87 DVLYKFRHSPNCSYLLPSTHHALVRQCLELGAEDELLELLKNRLQYGIFPDNFSFNLLMDHFLKKGN-----YKSAAKVA 161 (429)
T ss_pred HHHHHHHcCcccccccCccHHHHHHHHHhcCCHHHHHHHHhChhhcccCCChhhHHHHHHHHhhccc-----HHHHHHHH
Confidence 7899998754444 33 222222222 235678999999999999999884 47888888
Q ss_pred HHHHhcCccee
Q psy11552 177 QALLEEGVIYH 187 (714)
Q Consensus 177 q~Ll~~g~i~h 187 (714)
-.||.++...|
T Consensus 162 ~~~~lQe~~~~ 172 (429)
T PF10037_consen 162 TEMMLQEEFDN 172 (429)
T ss_pred HHHHHhhccCC
Confidence 89888877665
No 120
>KOG3572|consensus
Probab=22.19 E-value=74 Score=40.08 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=33.6
Q ss_pred hhHHHHHHhhCCCcccchhHHHHHHHH--Hhhccccccc---------ceeeEeecCCCCchh
Q psy11552 79 SELVDWLMSLAPSLAVSRQITTGMWQA--LLEEGVIYHG---------KISCFFFSETETIPM 130 (714)
Q Consensus 79 ~e~v~wl~~~~~~~~~~~~~a~~~~~~--l~~~g~~~hv---------~~~y~f~~~~~~~~~ 130 (714)
+=++.+...-.. |++|+.+||+ .+..|+.||+ ..||++--|-..++.
T Consensus 1309 nWL~n~f~gI~T-----re~AikygqK~~e~qlglf~hal~kh~fldG~YfY~ivpeys~d~v 1366 (1701)
T KOG3572|consen 1309 NWLQNYFAGIET-----REKAIKYGQKTNEKQLGLFHHALMKHVFLDGLYFYYIVPEYSKDEV 1366 (1701)
T ss_pred HHHHHhhhhhhh-----HHHHHHHHhhhhHHHhhhhhhhhhcceeccceEEEEeccccccchh
Confidence 345555555555 7899999999 8888999998 566777666555555
No 121
>COG3450 Predicted enzyme of the cupin superfamily [General function prediction only]
Probab=21.06 E-value=1.4e+02 Score=27.29 Aligned_cols=29 Identities=31% Similarity=0.557 Sum_probs=24.4
Q ss_pred CeEEEEEEeEEEEEEeCceEEEEecCCCcc
Q psy11552 346 KSWYIIIQGSVDVVIYGKGCVTSLYAGEDF 375 (714)
Q Consensus 346 ~~~YiI~~G~V~V~~~~~~~v~~l~~Gd~F 375 (714)
+.+.-|++|.+.+...+ |....+++||.|
T Consensus 64 ~E~chil~G~v~~T~d~-Ge~v~~~aGD~~ 92 (116)
T COG3450 64 DEFCHILEGRVEVTPDG-GEPVEVRAGDSF 92 (116)
T ss_pred ceEEEEEeeEEEEECCC-CeEEEEcCCCEE
Confidence 77888999999997766 477889999976
No 122
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=20.93 E-value=2.1e+02 Score=31.73 Aligned_cols=49 Identities=14% Similarity=0.187 Sum_probs=35.0
Q ss_pred ceEEeecCCCEEEccCCc-CCeEEEEEEeEEEEEEeC---ceEEEEecCCCcc
Q psy11552 327 MFEAHPRKGEILFHQGDE-GKSWYIIIQGSVDVVIYG---KGCVTSLYAGEDF 375 (714)
Q Consensus 327 ~~~~~~~~G~iI~~qGd~-g~~~YiI~~G~V~V~~~~---~~~v~~l~~Gd~F 375 (714)
+....+++|...-..=.+ .+.+|+|++|++.+...+ .+....+++||.+
T Consensus 247 ~~~~~l~PG~~~~~H~H~~~~E~~yvl~G~~~~~v~d~~g~~~~~~l~~GD~~ 299 (367)
T TIGR03404 247 AAIVTVEPGAMRELHWHPNADEWQYFIQGQARMTVFAAGGNARTFDYQAGDVG 299 (367)
T ss_pred EEEEEECCCCccCCeeCcCCCeEEEEEEEEEEEEEEecCCcEEEEEECCCCEE
Confidence 456678888877655555 678999999999987642 2356678888743
Done!