Query psy11555
Match_columns 484
No_of_seqs 274 out of 2737
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 21:30:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PHA03392 egt ecdysteroid UDP-g 100.0 3.9E-83 8.4E-88 652.8 48.1 443 1-453 43-496 (507)
2 PF00201 UDPGT: UDP-glucoronos 100.0 4.9E-85 1.1E-89 678.2 -5.7 472 1-481 21-500 (500)
3 KOG1192|consensus 100.0 7.2E-51 1.6E-55 422.4 43.2 375 72-451 89-481 (496)
4 PLN02670 transferase, transfer 100.0 1.6E-39 3.5E-44 326.7 29.1 317 86-426 100-466 (472)
5 PLN02207 UDP-glycosyltransfera 100.0 4.3E-39 9.2E-44 323.3 31.9 278 98-406 116-444 (468)
6 PLN02208 glycosyltransferase f 100.0 1.7E-39 3.7E-44 325.6 28.8 304 86-422 97-437 (442)
7 PLN02562 UDP-glycosyltransfera 100.0 7.2E-39 1.6E-43 322.9 31.5 199 205-407 204-430 (448)
8 PLN02554 UDP-glycosyltransfera 100.0 3.2E-38 7E-43 321.7 27.7 297 98-425 113-479 (481)
9 PLN02410 UDP-glucoronosyl/UDP- 100.0 4.6E-37 9.9E-42 308.9 29.7 279 97-406 105-429 (451)
10 TIGR01426 MGT glycosyltransfer 100.0 1.7E-36 3.6E-41 305.1 30.9 366 1-424 17-391 (392)
11 PLN03007 UDP-glucosyltransfera 100.0 3.5E-37 7.5E-42 314.5 25.3 296 87-406 113-459 (482)
12 PLN02764 glycosyltransferase f 100.0 2.4E-36 5.2E-41 301.4 30.6 313 85-425 97-446 (453)
13 PLN02210 UDP-glucosyl transfer 100.0 1.2E-36 2.7E-41 307.0 28.6 293 85-406 92-434 (456)
14 PLN03004 UDP-glycosyltransfera 100.0 2.7E-36 5.9E-41 302.1 29.1 281 97-406 112-440 (451)
15 PLN02992 coniferyl-alcohol glu 100.0 1.1E-35 2.4E-40 299.3 30.2 293 86-406 92-446 (481)
16 cd03784 GT1_Gtf_like This fami 100.0 1.5E-35 3.2E-40 299.5 31.2 372 1-421 22-400 (401)
17 PLN02863 UDP-glucoronosyl/UDP- 100.0 8E-36 1.7E-40 302.0 28.8 313 86-425 102-472 (477)
18 PLN02152 indole-3-acetate beta 100.0 1.9E-35 4.1E-40 296.3 30.1 294 86-406 91-435 (455)
19 PLN02555 limonoid glucosyltran 100.0 2.6E-35 5.7E-40 297.3 28.7 312 86-425 101-470 (480)
20 PLN02173 UDP-glucosyl transfer 100.0 6.3E-35 1.4E-39 292.2 31.1 290 86-405 89-426 (449)
21 PLN02448 UDP-glycosyltransfera 100.0 2.2E-35 4.7E-40 299.9 28.1 292 87-406 97-436 (459)
22 PLN00414 glycosyltransferase f 100.0 2E-35 4.4E-40 296.6 26.6 303 87-426 98-442 (446)
23 PLN00164 glucosyltransferase; 100.0 5.2E-34 1.1E-38 289.8 31.8 312 85-425 97-474 (480)
24 PLN03015 UDP-glucosyl transfer 100.0 1.7E-33 3.7E-38 281.7 28.8 292 85-406 94-447 (470)
25 PLN02534 UDP-glycosyltransfera 100.0 4.8E-33 1.1E-37 281.2 29.7 313 86-424 107-486 (491)
26 PLN02167 UDP-glycosyltransfera 100.0 3.6E-34 7.7E-39 291.6 21.6 279 97-406 118-451 (475)
27 COG1819 Glycosyl transferases, 100.0 1.6E-33 3.4E-38 280.6 22.2 215 200-427 186-403 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.8 6.5E-20 1.4E-24 179.4 18.7 122 254-387 191-317 (318)
29 PRK12446 undecaprenyldiphospho 99.8 6.5E-18 1.4E-22 166.4 28.4 155 254-421 184-351 (352)
30 PRK00726 murG undecaprenyldiph 99.8 1.8E-16 3.9E-21 157.6 26.8 144 277-424 200-356 (357)
31 COG0707 MurG UDP-N-acetylgluco 99.8 3.6E-16 7.8E-21 152.3 27.4 162 254-423 182-355 (357)
32 TIGR00661 MJ1255 conserved hyp 99.7 1.5E-16 3.2E-21 155.6 19.2 126 255-394 188-318 (321)
33 cd03785 GT1_MurG MurG is an N- 99.7 7.4E-15 1.6E-19 145.6 26.0 154 255-417 181-349 (350)
34 TIGR01133 murG undecaprenyldip 99.6 1.5E-13 3.3E-18 136.1 23.3 99 315-417 245-346 (348)
35 COG4671 Predicted glycosyl tra 99.6 1.7E-13 3.7E-18 127.5 19.3 174 207-391 168-366 (400)
36 PF04101 Glyco_tran_28_C: Glyc 99.5 4.5E-16 9.7E-21 137.2 -2.4 136 257-399 1-153 (167)
37 PRK13608 diacylglycerol glucos 99.5 7.3E-12 1.6E-16 125.9 20.9 158 255-425 202-371 (391)
38 PRK13609 diacylglycerol glucos 99.4 1.5E-11 3.2E-16 123.5 21.8 157 255-424 202-370 (380)
39 PLN02605 monogalactosyldiacylg 99.4 5.9E-11 1.3E-15 119.1 22.1 128 288-423 242-379 (382)
40 cd03814 GT1_like_2 This family 99.4 5.2E-11 1.1E-15 117.9 19.1 139 255-406 196-348 (364)
41 PLN02871 UDP-sulfoquinovose:DA 99.3 9.7E-10 2.1E-14 113.3 25.2 139 256-405 263-415 (465)
42 cd03818 GT1_ExpC_like This fam 99.3 1.3E-09 2.8E-14 110.1 24.9 97 303-405 280-381 (396)
43 TIGR03590 PseG pseudaminic aci 99.3 7.9E-11 1.7E-15 112.4 14.8 97 256-360 171-278 (279)
44 cd03823 GT1_ExpE7_like This fa 99.2 2E-09 4.4E-14 106.2 21.7 139 255-404 190-343 (359)
45 PRK10307 putative glycosyl tra 99.2 1E-08 2.2E-13 104.1 26.4 155 254-420 227-402 (412)
46 cd03800 GT1_Sucrose_synthase T 99.2 1.4E-08 3E-13 102.3 26.8 139 255-404 219-382 (398)
47 TIGR03449 mycothiol_MshA UDP-N 99.1 2.2E-08 4.9E-13 101.3 25.0 105 302-415 281-392 (405)
48 cd04962 GT1_like_5 This family 99.1 9.5E-09 2.1E-13 102.5 21.8 153 254-419 195-365 (371)
49 cd03795 GT1_like_4 This family 99.1 1.9E-08 4.2E-13 99.5 23.6 140 255-405 190-347 (357)
50 TIGR00215 lpxB lipid-A-disacch 99.1 8.8E-10 1.9E-14 110.3 13.9 158 255-419 191-382 (385)
51 cd03794 GT1_wbuB_like This fam 99.1 5E-09 1.1E-13 104.3 19.3 141 255-406 219-381 (394)
52 cd03820 GT1_amsD_like This fam 99.1 1.9E-08 4.2E-13 98.3 22.8 150 255-418 177-346 (348)
53 TIGR02472 sucr_P_syn_N sucrose 99.1 4E-08 8.7E-13 100.5 25.8 155 256-422 248-437 (439)
54 cd03801 GT1_YqgM_like This fam 99.1 1.6E-08 3.5E-13 99.5 20.1 137 255-402 198-353 (374)
55 cd03817 GT1_UGDG_like This fam 99.1 2.1E-08 4.6E-13 99.3 20.9 139 255-405 201-358 (374)
56 PRK00025 lpxB lipid-A-disaccha 99.1 2.4E-09 5.2E-14 107.4 14.1 106 316-424 257-376 (380)
57 cd03808 GT1_cap1E_like This fa 99.0 4E-08 8.6E-13 96.5 22.0 137 255-404 187-343 (359)
58 cd03816 GT1_ALG1_like This fam 99.0 7.9E-08 1.7E-12 97.6 24.0 138 255-405 231-399 (415)
59 TIGR03492 conserved hypothetic 99.0 1.2E-08 2.6E-13 102.3 16.0 157 255-422 205-395 (396)
60 cd03805 GT1_ALG2_like This fam 99.0 4.5E-07 9.7E-12 91.3 26.7 137 255-403 210-377 (392)
61 cd03821 GT1_Bme6_like This fam 99.0 3.1E-07 6.7E-12 90.9 24.8 137 255-404 202-359 (375)
62 cd03799 GT1_amsK_like This is 98.9 7.7E-08 1.7E-12 95.1 19.7 138 255-403 178-340 (355)
63 cd03822 GT1_ecORF704_like This 98.9 3.9E-07 8.5E-12 90.2 24.4 108 302-417 245-360 (366)
64 cd05844 GT1_like_7 Glycosyltra 98.9 4.9E-07 1.1E-11 90.0 25.1 96 302-403 243-349 (367)
65 cd03819 GT1_WavL_like This fam 98.9 1.2E-07 2.7E-12 93.7 20.0 138 254-404 183-345 (355)
66 cd03798 GT1_wlbH_like This fam 98.9 2.3E-07 5E-12 91.5 21.9 128 255-393 201-347 (377)
67 TIGR02468 sucrsPsyn_pln sucros 98.9 2.6E-07 5.6E-12 100.4 22.6 168 244-424 468-670 (1050)
68 TIGR03088 stp2 sugar transfera 98.9 1E-06 2.2E-11 88.2 25.4 140 255-403 193-351 (374)
69 cd03812 GT1_CapH_like This fam 98.9 4E-07 8.7E-12 90.2 21.5 134 255-402 191-343 (358)
70 cd03825 GT1_wcfI_like This fam 98.8 8.7E-07 1.9E-11 87.9 23.4 95 302-404 242-344 (365)
71 PLN00142 sucrose synthase 98.8 1.8E-06 4E-11 91.9 26.6 157 256-424 573-769 (815)
72 TIGR00236 wecB UDP-N-acetylglu 98.8 3.3E-07 7.2E-12 91.4 20.4 151 256-420 198-362 (365)
73 cd03807 GT1_WbnK_like This fam 98.8 1.4E-06 3E-11 85.8 24.2 136 254-404 191-346 (365)
74 cd04951 GT1_WbdM_like This fam 98.8 1.2E-06 2.7E-11 86.7 23.2 136 254-404 186-341 (360)
75 cd03796 GT1_PIG-A_like This fa 98.8 1.1E-06 2.3E-11 88.9 22.9 124 255-391 192-334 (398)
76 cd04955 GT1_like_6 This family 98.8 8.3E-07 1.8E-11 88.1 20.9 132 258-404 195-344 (363)
77 cd03811 GT1_WabH_like This fam 98.8 1E-06 2.3E-11 86.1 21.1 132 255-399 188-341 (353)
78 cd03786 GT1_UDP-GlcNAc_2-Epime 98.8 2.7E-07 5.8E-12 92.0 17.0 135 254-398 197-345 (363)
79 PRK05749 3-deoxy-D-manno-octul 98.8 3.6E-06 7.8E-11 85.8 25.4 99 321-423 318-421 (425)
80 cd03802 GT1_AviGT4_like This f 98.8 1.3E-06 2.8E-11 85.7 21.5 145 257-420 172-332 (335)
81 TIGR02470 sucr_synth sucrose s 98.7 4.2E-06 9E-11 89.2 24.5 137 256-403 550-726 (784)
82 PF04007 DUF354: Protein of un 98.7 2.5E-06 5.4E-11 82.7 19.9 161 246-423 170-334 (335)
83 cd03809 GT1_mtfB_like This fam 98.7 7.4E-07 1.6E-11 88.2 16.5 146 255-414 194-359 (365)
84 TIGR02149 glgA_Coryne glycogen 98.6 1E-05 2.2E-10 81.3 24.1 156 255-419 200-381 (388)
85 cd03792 GT1_Trehalose_phosphor 98.6 1E-05 2.2E-10 81.0 23.9 152 254-420 188-367 (372)
86 PRK00654 glgA glycogen synthas 98.6 5.7E-06 1.2E-10 85.3 22.2 130 255-398 281-439 (466)
87 cd03806 GT1_ALG11_like This fa 98.6 8.1E-06 1.8E-10 82.9 21.8 89 302-397 303-400 (419)
88 PLN02846 digalactosyldiacylgly 98.6 2.6E-06 5.7E-11 86.1 17.9 118 258-391 230-364 (462)
89 TIGR02095 glgA glycogen/starch 98.5 6.8E-06 1.5E-10 85.0 20.0 134 255-401 290-452 (473)
90 cd03791 GT1_Glycogen_synthase_ 98.5 7.7E-06 1.7E-10 84.7 19.3 155 255-418 295-470 (476)
91 KOG3349|consensus 98.5 5.7E-07 1.2E-11 73.8 8.2 117 256-374 4-136 (170)
92 PLN02501 digalactosyldiacylgly 98.5 7.4E-06 1.6E-10 84.9 17.3 116 271-397 556-688 (794)
93 COG1519 KdtA 3-deoxy-D-manno-o 98.4 3.7E-05 8E-10 74.9 19.9 89 327-420 328-416 (419)
94 PLN02275 transferase, transfer 98.4 2.5E-05 5.4E-10 78.1 19.5 77 304-388 286-371 (371)
95 PRK15427 colanic acid biosynth 98.4 2.5E-06 5.4E-11 86.3 12.3 156 256-423 222-403 (406)
96 cd03813 GT1_like_3 This family 98.4 4.5E-05 9.8E-10 78.9 21.1 137 255-404 292-456 (475)
97 PF00534 Glycos_transf_1: Glyc 98.4 2E-06 4.2E-11 75.9 9.4 141 250-403 9-171 (172)
98 PRK15484 lipopolysaccharide 1, 98.3 2.5E-05 5.5E-10 78.3 17.0 156 255-424 192-376 (380)
99 PLN02316 synthase/transferase 98.3 0.00012 2.6E-09 80.3 22.8 139 256-403 840-1012(1036)
100 cd04946 GT1_AmsK_like This fam 98.3 1.3E-05 2.9E-10 81.1 14.5 140 255-404 229-391 (407)
101 PRK10125 putative glycosyl tra 98.3 0.00054 1.2E-08 69.2 25.6 117 257-384 242-365 (405)
102 PF02350 Epimerase_2: UDP-N-ac 98.3 1.4E-05 3E-10 78.7 13.3 179 227-419 146-345 (346)
103 cd03804 GT1_wbaZ_like This fam 98.2 3.5E-06 7.5E-11 83.5 9.0 133 258-403 197-340 (351)
104 COG3980 spsG Spore coat polysa 98.2 7E-06 1.5E-10 75.1 9.4 144 255-406 158-309 (318)
105 PRK15179 Vi polysaccharide bio 98.2 0.00047 1E-08 73.6 24.3 135 256-401 517-674 (694)
106 PRK14089 ipid-A-disaccharide s 98.2 5E-06 1.1E-10 81.2 8.3 155 255-421 167-346 (347)
107 COG5017 Uncharacterized conser 98.2 2.6E-05 5.7E-10 63.0 10.7 127 258-388 2-140 (161)
108 PRK15490 Vi polysaccharide bio 98.1 0.0011 2.4E-08 68.0 23.3 120 256-384 398-532 (578)
109 PLN02939 transferase, transfer 98.1 0.0011 2.3E-08 71.9 24.0 135 256-399 779-944 (977)
110 TIGR03568 NeuC_NnaA UDP-N-acet 98.1 0.00024 5.2E-09 70.7 17.7 131 255-397 201-345 (365)
111 PF13844 Glyco_transf_41: Glyc 98.1 3.5E-05 7.6E-10 77.4 11.4 173 246-424 275-465 (468)
112 PRK09922 UDP-D-galactose:(gluc 98.1 3.8E-05 8.2E-10 76.4 11.8 140 256-404 180-340 (359)
113 PLN02949 transferase, transfer 98.0 0.00052 1.1E-08 70.3 19.3 94 302-402 333-435 (463)
114 cd04949 GT1_gtfA_like This fam 98.0 6.9E-05 1.5E-09 74.8 11.7 137 256-404 204-359 (372)
115 PRK01021 lpxB lipid-A-disaccha 97.9 0.0011 2.3E-08 68.5 18.1 168 225-399 380-580 (608)
116 TIGR03087 stp1 sugar transfera 97.8 0.00031 6.8E-09 70.9 13.8 111 303-424 279-395 (397)
117 COG0381 WecB UDP-N-acetylgluco 97.8 0.0022 4.7E-08 62.3 18.3 163 250-424 199-373 (383)
118 TIGR02918 accessory Sec system 97.7 0.00064 1.4E-08 70.4 14.3 153 256-420 319-495 (500)
119 cd04950 GT1_like_1 Glycosyltra 97.7 0.00057 1.2E-08 68.4 13.6 121 256-391 205-341 (373)
120 PHA01633 putative glycosyl tra 97.5 0.00051 1.1E-08 66.9 9.2 128 255-389 147-306 (335)
121 PF02684 LpxB: Lipid-A-disacch 97.5 0.0026 5.7E-08 62.8 14.1 175 224-404 151-354 (373)
122 COG0763 LpxB Lipid A disacchar 97.5 0.0036 7.8E-08 60.7 14.3 187 228-423 158-379 (381)
123 PRK09814 beta-1,6-galactofuran 97.4 0.0018 3.9E-08 63.7 11.7 112 288-407 191-319 (333)
124 PHA01630 putative group 1 glyc 97.3 0.0034 7.4E-08 61.5 13.0 105 311-424 197-329 (331)
125 PF13692 Glyco_trans_1_4: Glyc 97.1 0.00048 1E-08 57.8 4.1 78 303-390 52-135 (135)
126 PRK14098 glycogen synthase; Pr 96.9 0.0039 8.5E-08 64.6 9.6 132 255-397 306-461 (489)
127 PF03033 Glyco_transf_28: Glyc 96.7 0.00048 1E-08 58.2 0.2 34 97-131 100-133 (139)
128 PF13524 Glyco_trans_1_2: Glyc 96.6 0.017 3.7E-07 44.8 8.5 82 329-419 9-91 (92)
129 PRK14099 glycogen synthase; Pr 96.5 0.017 3.7E-07 59.8 10.3 137 256-401 295-458 (485)
130 COG3914 Spy Predicted O-linked 96.3 0.11 2.3E-06 53.0 13.8 129 250-385 424-573 (620)
131 TIGR03713 acc_sec_asp1 accesso 96.0 0.02 4.3E-07 59.5 7.6 103 304-418 409-515 (519)
132 PF13579 Glyco_trans_4_4: Glyc 95.8 0.025 5.5E-07 48.2 6.3 33 95-127 71-104 (160)
133 cd01635 Glycosyltransferase_GT 95.6 0.018 3.9E-07 52.3 5.0 51 302-352 159-215 (229)
134 KOG4626|consensus 95.5 0.19 4.2E-06 51.5 11.8 194 224-424 724-939 (966)
135 PF13477 Glyco_trans_4_2: Glyc 95.1 0.18 3.9E-06 42.2 9.2 41 87-128 65-108 (139)
136 cd03788 GT1_TPS Trehalose-6-Ph 95.0 0.48 1.1E-05 48.8 13.8 75 308-391 345-428 (460)
137 COG1817 Uncharacterized protei 94.7 3.3 7.3E-05 39.3 16.9 136 273-425 203-342 (346)
138 TIGR02400 trehalose_OtsA alpha 94.7 1.3 2.9E-05 45.4 15.7 101 309-424 341-452 (456)
139 COG0438 RfaG Glycosyltransfera 94.4 0.99 2.2E-05 43.2 13.8 89 303-399 256-351 (381)
140 PF06722 DUF1205: Protein of u 94.1 0.075 1.6E-06 41.6 4.0 64 244-307 28-97 (97)
141 TIGR02919 accessory Sec system 93.6 0.37 8.1E-06 49.0 9.1 121 273-402 291-424 (438)
142 PF13439 Glyco_transf_4: Glyco 92.7 0.47 1E-05 41.0 7.4 41 87-129 71-111 (177)
143 PRK14501 putative bifunctional 92.7 1.2 2.6E-05 48.8 11.9 95 306-405 344-445 (726)
144 PF05159 Capsule_synth: Capsul 92.5 5.3 0.00012 37.8 14.9 72 274-348 141-224 (269)
145 PRK10017 colanic acid biosynth 92.5 0.88 1.9E-05 46.1 10.0 85 316-406 323-409 (426)
146 PF12000 Glyco_trans_4_3: Gkyc 91.5 1.8 3.9E-05 37.7 9.4 37 89-126 58-95 (171)
147 PF06258 Mito_fiss_Elm1: Mitoc 90.8 2.5 5.5E-05 40.9 10.6 162 204-371 95-281 (311)
148 PLN03063 alpha,alpha-trehalose 90.3 2 4.3E-05 47.4 10.6 88 311-406 363-461 (797)
149 cd03793 GT1_Glycogen_synthase_ 90.0 1.6 3.4E-05 45.6 8.8 77 321-400 473-561 (590)
150 KOG0853|consensus 89.8 0.22 4.7E-06 50.6 2.5 65 333-401 380-444 (495)
151 TIGR02398 gluc_glyc_Psyn gluco 88.9 9.9 0.00021 39.3 13.7 106 305-425 363-479 (487)
152 COG3660 Predicted nucleoside-d 87.3 13 0.00028 34.6 11.7 36 311-348 235-271 (329)
153 COG4370 Uncharacterized protei 84.9 5.6 0.00012 37.6 8.3 92 309-402 282-391 (412)
154 PF04464 Glyphos_transf: CDP-G 84.2 5.9 0.00013 39.3 9.2 137 276-420 219-368 (369)
155 PRK02155 ppnK NAD(+)/NADH kina 77.0 14 0.00031 35.3 8.6 97 273-391 20-120 (291)
156 TIGR02193 heptsyl_trn_I lipopo 76.5 7.6 0.00017 37.7 6.9 125 255-388 179-319 (319)
157 PRK10964 ADP-heptose:LPS hepto 75.6 6.8 0.00015 38.1 6.2 126 256-388 179-320 (322)
158 PF07429 Glyco_transf_56: 4-al 74.5 37 0.0008 33.1 10.5 79 304-388 245-331 (360)
159 PRK04885 ppnK inorganic polyph 74.2 6.3 0.00014 37.2 5.3 54 322-391 35-94 (265)
160 COG2910 Putative NADH-flavin r 73.4 4.4 9.6E-05 35.5 3.6 28 1-28 18-46 (211)
161 TIGR00725 conserved hypothetic 70.9 19 0.00041 31.0 7.1 96 244-350 21-123 (159)
162 cd03789 GT1_LPS_heptosyltransf 67.7 7.7 0.00017 36.8 4.5 91 255-348 121-223 (279)
163 PF01075 Glyco_transf_9: Glyco 67.3 6.9 0.00015 36.2 4.0 92 254-348 104-208 (247)
164 PRK03372 ppnK inorganic polyph 65.9 12 0.00026 36.1 5.4 55 321-391 71-129 (306)
165 PRK02649 ppnK inorganic polyph 64.6 11 0.00024 36.4 4.8 55 321-391 67-125 (305)
166 PF00731 AIRC: AIR carboxylase 63.5 38 0.00083 28.8 7.3 136 257-406 2-148 (150)
167 PF15050 SCIMP: SCIMP protein 62.4 21 0.00045 28.6 5.0 26 438-463 1-26 (133)
168 PRK14075 pnk inorganic polypho 62.0 50 0.0011 31.0 8.6 84 272-391 11-95 (256)
169 PRK14077 pnk inorganic polypho 61.4 14 0.0003 35.3 4.8 55 321-391 63-121 (287)
170 PRK04539 ppnK inorganic polyph 61.1 18 0.00039 34.7 5.5 54 322-391 68-125 (296)
171 PRK01911 ppnK inorganic polyph 60.8 15 0.00032 35.2 4.9 54 322-391 64-121 (292)
172 KOG1111|consensus 59.7 1.1E+02 0.0024 30.1 10.3 89 258-349 197-302 (426)
173 COG0297 GlgA Glycogen synthase 58.4 82 0.0018 32.6 10.0 127 255-388 293-440 (487)
174 cd01965 Nitrogenase_MoFe_beta_ 58.3 16 0.00035 37.2 5.0 36 87-127 362-397 (428)
175 PRK03708 ppnK inorganic polyph 57.5 16 0.00034 34.8 4.4 95 273-391 15-113 (277)
176 cd01635 Glycosyltransferase_GT 57.4 34 0.00073 30.3 6.6 42 88-130 43-86 (229)
177 PRK02231 ppnK inorganic polyph 57.2 14 0.0003 35.0 4.0 56 322-393 42-101 (272)
178 PRK01185 ppnK inorganic polyph 56.8 18 0.0004 34.2 4.7 54 322-391 52-106 (271)
179 TIGR01278 DPOR_BchB light-inde 56.7 30 0.00064 36.2 6.7 36 87-127 355-390 (511)
180 PRK03501 ppnK inorganic polyph 56.6 23 0.0005 33.4 5.3 55 322-391 39-98 (264)
181 CHL00076 chlB photochlorophyll 56.0 27 0.00059 36.5 6.3 36 87-127 365-400 (513)
182 PLN02935 Bifunctional NADH kin 55.6 25 0.00055 36.1 5.7 55 321-391 261-319 (508)
183 PF05693 Glycogen_syn: Glycoge 55.0 9.8 0.00021 39.9 2.8 69 334-403 485-565 (633)
184 COG0003 ArsA Predicted ATPase 54.3 41 0.00089 32.7 6.8 35 334-368 268-302 (322)
185 PF04127 DFP: DNA / pantothena 54.3 17 0.00038 32.2 3.9 32 2-33 38-69 (185)
186 PF11628 TCR_zetazeta: T-cell 53.2 26 0.00057 21.1 3.2 19 444-462 6-24 (33)
187 PLN02929 NADH kinase 52.7 17 0.00038 34.8 3.9 99 271-391 31-138 (301)
188 PRK03378 ppnK inorganic polyph 52.1 23 0.00049 34.0 4.6 55 321-391 62-120 (292)
189 PRK12342 hypothetical protein; 52.0 19 0.00042 33.7 4.0 39 88-127 101-144 (254)
190 cd03466 Nitrogenase_NifN_2 Nit 51.9 23 0.0005 36.1 4.9 36 86-126 362-397 (429)
191 KOG1387|consensus 51.1 2.5E+02 0.0055 27.6 17.8 89 302-406 335-445 (465)
192 TIGR00730 conserved hypothetic 50.8 1E+02 0.0022 27.1 8.2 112 245-366 23-153 (178)
193 PRK01231 ppnK inorganic polyph 50.6 25 0.00055 33.7 4.7 54 322-391 62-119 (295)
194 TIGR01286 nifK nitrogenase mol 50.2 26 0.00056 36.6 5.0 36 87-127 428-463 (515)
195 PRK04761 ppnK inorganic polyph 49.7 33 0.00072 31.9 5.1 54 322-390 25-82 (246)
196 PRK10422 lipopolysaccharide co 49.6 49 0.0011 32.6 6.8 91 255-348 183-287 (352)
197 PRK02910 light-independent pro 47.8 35 0.00075 35.8 5.6 35 87-126 353-387 (519)
198 PF06925 MGDG_synth: Monogalac 47.6 39 0.00085 29.2 5.1 48 78-127 72-124 (169)
199 cd01974 Nitrogenase_MoFe_beta 47.3 33 0.00072 35.0 5.2 36 87-127 368-403 (435)
200 TIGR02201 heptsyl_trn_III lipo 47.1 76 0.0017 31.0 7.7 91 255-348 181-285 (344)
201 PRK03359 putative electron tra 46.7 28 0.00061 32.6 4.2 39 88-127 104-147 (256)
202 cd03146 GAT1_Peptidase_E Type 46.4 1.3E+02 0.0029 27.1 8.5 101 228-349 2-121 (212)
203 COG0801 FolK 7,8-dihydro-6-hyd 45.6 35 0.00076 29.3 4.2 36 256-294 2-37 (160)
204 TIGR02195 heptsyl_trn_II lipop 44.4 46 0.001 32.4 5.7 91 255-348 174-276 (334)
205 COG1703 ArgK Putative periplas 44.4 37 0.0008 32.4 4.5 19 2-20 74-92 (323)
206 TIGR01285 nifN nitrogenase mol 42.9 40 0.00087 34.4 5.0 35 87-126 364-398 (432)
207 COG3563 KpsC Capsule polysacch 42.6 2.4E+02 0.0051 29.0 9.8 155 272-447 165-336 (671)
208 PRK14076 pnk inorganic polypho 42.1 36 0.00079 36.1 4.7 54 322-391 348-405 (569)
209 PF10661 EssA: WXG100 protein 41.8 38 0.00082 28.7 3.8 24 448-471 121-144 (145)
210 smart00096 UTG Uteroglobin. 41.4 1.3E+02 0.0029 21.8 6.0 50 376-425 17-66 (69)
211 PF02374 ArsA_ATPase: Anion-tr 40.1 81 0.0018 30.5 6.4 17 2-18 24-40 (305)
212 PRK09620 hypothetical protein; 40.0 77 0.0017 29.2 6.0 16 1-16 37-52 (229)
213 cd01981 Pchlide_reductase_B Pc 39.6 54 0.0012 33.4 5.4 37 86-127 360-396 (430)
214 PRK02645 ppnK inorganic polyph 39.2 50 0.0011 31.9 4.8 94 273-390 18-115 (305)
215 PLN02727 NAD kinase 39.0 48 0.001 36.8 5.0 55 321-391 742-800 (986)
216 PF00558 Vpu: Vpu protein; In 38.2 45 0.00098 25.0 3.3 16 445-460 3-18 (81)
217 PF05399 EVI2A: Ectropic viral 37.8 37 0.00081 30.3 3.3 19 443-461 131-149 (227)
218 PRK10916 ADP-heptose:LPS hepto 37.2 89 0.0019 30.6 6.4 92 254-348 179-286 (348)
219 PF10933 DUF2827: Protein of u 37.0 1.3E+02 0.0028 29.6 7.1 95 306-416 255-358 (364)
220 COG2861 Uncharacterized protei 36.7 87 0.0019 28.8 5.5 49 78-126 129-180 (250)
221 PF07355 GRDB: Glycine/sarcosi 36.6 65 0.0014 31.5 5.0 40 87-127 71-119 (349)
222 PF05393 Hum_adeno_E3A: Human 36.4 64 0.0014 24.4 3.8 18 445-463 32-49 (94)
223 PF15024 Glyco_transf_18: Glyc 36.1 2.4E+02 0.0051 29.7 9.1 86 300-391 318-431 (559)
224 PF08323 Glyco_transf_5: Starc 35.8 19 0.00041 33.5 1.3 16 1-16 27-42 (245)
225 PHA02845 hypothetical protein; 35.5 1.6E+02 0.0034 22.5 5.7 42 412-460 19-60 (91)
226 cd01141 TroA_d Periplasmic bin 35.2 63 0.0014 28.2 4.5 42 84-127 58-100 (186)
227 PRK08558 adenine phosphoribosy 35.2 91 0.002 28.9 5.6 47 80-126 87-141 (238)
228 PF05225 HTH_psq: helix-turn-h 34.8 55 0.0012 21.4 3.0 25 376-400 1-26 (45)
229 PRK13240 pbsY photosystem II p 34.8 93 0.002 19.8 3.8 35 448-482 5-39 (40)
230 PF05568 ASFV_J13L: African sw 34.6 98 0.0021 25.7 5.0 11 439-449 25-35 (189)
231 TIGR01862 N2-ase-Ialpha nitrog 34.2 39 0.00084 34.6 3.3 34 87-125 378-411 (443)
232 TIGR02931 anfK_nitrog Fe-only 34.1 81 0.0018 32.5 5.7 36 87-126 377-413 (461)
233 PRK12446 undecaprenyldiphospho 33.3 2E+02 0.0044 28.3 8.2 31 318-348 87-120 (352)
234 cd01971 Nitrogenase_VnfN_like 32.5 79 0.0017 32.2 5.3 36 87-127 358-397 (427)
235 PF07069 PRRSV_2b: Porcine rep 32.5 1.1E+02 0.0024 21.2 4.2 36 446-481 27-67 (73)
236 cd00633 Secretoglobin Secretog 32.3 1.9E+02 0.004 20.6 6.1 50 376-425 15-64 (67)
237 COG0391 Uncharacterized conser 32.1 4.6E+02 0.0099 25.6 9.9 149 225-401 166-318 (323)
238 cd05005 SIS_PHI Hexulose-6-pho 31.5 3.4E+02 0.0073 23.5 8.6 75 250-349 30-109 (179)
239 cd01977 Nitrogenase_VFe_alpha 31.5 44 0.00095 33.9 3.2 33 88-125 350-382 (415)
240 TIGR01284 alt_nitrog_alph nitr 31.4 38 0.00083 34.8 2.8 35 87-126 386-420 (457)
241 COG0052 RpsB Ribosomal protein 31.4 1.3E+02 0.0029 27.8 5.8 36 97-132 156-192 (252)
242 cd01424 MGS_CPS_II Methylglyox 31.3 1.1E+02 0.0024 24.1 5.0 40 84-124 55-100 (110)
243 TIGR01743 purR_Bsub pur operon 31.2 98 0.0021 29.2 5.2 48 81-128 105-160 (268)
244 PF03641 Lysine_decarbox: Poss 31.0 83 0.0018 26.0 4.3 58 307-365 39-110 (133)
245 PF02038 ATP1G1_PLM_MAT8: ATP1 31.0 86 0.0019 21.1 3.3 31 440-470 8-38 (50)
246 PF14979 TMEM52: Transmembrane 30.9 1.1E+02 0.0023 25.7 4.7 30 446-475 20-50 (154)
247 TIGR01860 VNFD nitrogenase van 30.3 55 0.0012 33.7 3.7 31 88-123 389-419 (461)
248 PF05728 UPF0227: Uncharacteri 29.9 1.1E+02 0.0025 27.0 5.2 41 88-129 49-91 (187)
249 TIGR02932 vnfK_nitrog V-contai 29.9 92 0.002 32.1 5.2 36 87-126 374-409 (457)
250 PF06506 PrpR_N: Propionate ca 29.9 19 0.00041 31.6 0.2 33 319-352 31-63 (176)
251 TIGR00345 arsA arsenite-activa 29.2 1.8E+02 0.0039 27.7 6.8 17 2-18 8-24 (284)
252 cd02991 UAS_ETEA UAS family, E 29.0 1.9E+02 0.0041 23.3 5.9 50 74-126 31-83 (116)
253 PRK14750 kdpF potassium-transp 28.2 1.3E+02 0.0028 17.5 3.3 23 445-467 2-24 (29)
254 PRK13982 bifunctional SbtC-lik 28.0 82 0.0018 32.5 4.4 33 1-33 290-322 (475)
255 PRK06524 biotin carboxylase-li 27.7 96 0.0021 32.1 4.8 53 71-125 79-132 (493)
256 PHA02649 hypothetical protein; 27.4 2.8E+02 0.0061 21.1 6.6 43 410-459 17-59 (95)
257 PF15086 UPF0542: Uncharacteri 27.3 1.6E+02 0.0034 21.5 4.3 45 413-472 6-50 (74)
258 PLN02470 acetolactate synthase 27.2 92 0.002 33.2 4.9 88 261-349 2-109 (585)
259 cd00532 MGS-like MGS-like doma 27.1 1.3E+02 0.0028 24.0 4.6 41 84-125 55-105 (112)
260 PF14851 FAM176: FAM176 family 26.8 78 0.0017 27.0 3.3 23 449-471 25-47 (153)
261 cd01973 Nitrogenase_VFe_beta_l 26.4 1E+02 0.0022 31.7 4.9 36 87-126 370-406 (454)
262 COG0041 PurE Phosphoribosylcar 26.3 4.1E+02 0.009 22.7 9.4 134 257-406 4-150 (162)
263 cd01976 Nitrogenase_MoFe_alpha 26.2 68 0.0015 32.6 3.5 35 87-126 360-394 (421)
264 TIGR01917 gly_red_sel_B glycin 26.2 1.1E+02 0.0024 30.7 4.8 40 87-127 67-115 (431)
265 TIGR01918 various_sel_PB selen 26.2 1.1E+02 0.0024 30.7 4.8 40 87-127 67-115 (431)
266 KOG0081|consensus 26.0 1.7E+02 0.0037 25.1 5.1 36 95-130 122-166 (219)
267 smart00594 UAS UAS domain. 25.9 2.1E+02 0.0046 23.1 5.8 51 73-126 40-93 (122)
268 COG0859 RfaF ADP-heptose:LPS h 25.9 1.3E+02 0.0028 29.4 5.3 91 255-348 175-276 (334)
269 cd01968 Nitrogenase_NifE_I Nit 25.7 92 0.002 31.5 4.4 34 87-125 347-380 (410)
270 PHA02754 hypothetical protein; 25.5 1E+02 0.0023 21.2 3.0 23 384-406 7-29 (67)
271 PLN03064 alpha,alpha-trehalose 25.2 2.1E+02 0.0045 32.4 7.1 100 311-423 447-556 (934)
272 TIGR01283 nifE nitrogenase mol 24.9 86 0.0019 32.2 4.0 35 87-126 386-420 (456)
273 PRK14092 2-amino-4-hydroxy-6-h 24.8 1.2E+02 0.0026 26.3 4.2 31 255-288 7-37 (163)
274 cd00316 Oxidoreductase_nitroge 24.6 1.2E+02 0.0025 30.4 4.9 35 87-126 339-373 (399)
275 PRK09213 pur operon repressor; 24.3 1.2E+02 0.0026 28.7 4.5 34 95-128 128-162 (271)
276 COG0503 Apt Adenine/guanine ph 24.2 1.4E+02 0.0031 26.1 4.8 40 87-127 44-84 (179)
277 TIGR01861 ANFD nitrogenase iro 24.1 84 0.0018 32.9 3.7 33 88-125 390-422 (513)
278 PHA02849 putative transmembran 24.1 1.8E+02 0.0039 21.4 4.2 22 448-469 19-40 (82)
279 TIGR02015 BchY chlorophyllide 24.0 94 0.002 31.6 4.0 32 90-126 349-380 (422)
280 COG2011 AbcD ABC-type metal io 24.0 1.2E+02 0.0025 27.4 4.0 34 441-474 186-219 (222)
281 PRK14478 nitrogenase molybdenu 24.0 84 0.0018 32.5 3.7 34 86-124 383-416 (475)
282 PRK13810 orotate phosphoribosy 23.9 1.7E+02 0.0038 25.9 5.2 33 95-127 71-104 (187)
283 cd07039 TPP_PYR_POX Pyrimidine 23.9 2.2E+02 0.0049 24.4 5.9 28 322-349 63-96 (164)
284 PRK00561 ppnK inorganic polyph 23.9 1.4E+02 0.0031 28.0 4.9 30 321-350 32-65 (259)
285 PF12689 Acid_PPase: Acid Phos 23.6 1.1E+02 0.0023 26.7 3.8 47 340-386 119-165 (169)
286 TIGR01917 gly_red_sel_B glycin 23.3 7.2E+02 0.016 25.2 9.7 45 85-130 325-375 (431)
287 KOG0129|consensus 23.3 1.2E+02 0.0026 31.1 4.4 55 207-265 350-406 (520)
288 PRK02797 4-alpha-L-fucosyltran 23.3 1.6E+02 0.0035 28.4 5.1 77 304-386 206-290 (322)
289 TIGR01918 various_sel_PB selen 22.9 7.2E+02 0.016 25.2 9.6 45 85-130 325-375 (431)
290 cd01451 vWA_Magnesium_chelatas 22.8 3E+02 0.0064 23.8 6.6 47 339-385 129-177 (178)
291 cd01980 Chlide_reductase_Y Chl 22.6 1.2E+02 0.0026 30.8 4.5 32 90-126 344-375 (416)
292 PF11346 DUF3149: Protein of u 22.5 2.3E+02 0.0049 18.3 4.8 35 442-476 5-39 (42)
293 PF01102 Glycophorin_A: Glycop 22.5 1.7E+02 0.0036 24.0 4.4 28 449-477 67-94 (122)
294 PRK04330 hypothetical protein; 22.4 2.6E+02 0.0057 21.3 5.0 54 380-433 14-71 (88)
295 PF09314 DUF1972: Domain of un 22.4 1.1E+02 0.0023 27.2 3.6 30 2-31 29-62 (185)
296 COG1087 GalE UDP-glucose 4-epi 22.3 7.2E+02 0.016 24.1 10.6 16 2-17 19-34 (329)
297 COG1618 Predicted nucleotide k 22.1 2.1E+02 0.0045 24.9 5.0 55 334-390 122-177 (179)
298 PF04230 PS_pyruv_trans: Polys 22.0 1.7E+02 0.0036 26.9 5.2 36 86-127 249-284 (286)
299 COG2086 FixA Electron transfer 21.9 1.6E+02 0.0035 27.7 4.8 39 88-127 103-146 (260)
300 PRK03202 6-phosphofructokinase 21.7 7.5E+02 0.016 24.1 11.1 103 319-424 159-277 (320)
301 PF08660 Alg14: Oligosaccharid 21.7 1.1E+02 0.0023 26.7 3.4 36 95-130 90-132 (170)
302 cd02958 UAS UAS family; UAS is 21.7 2.4E+02 0.0053 22.2 5.4 50 74-126 31-83 (114)
303 PF07219 HemY_N: HemY protein 21.6 1.6E+02 0.0035 23.3 4.2 23 449-471 19-41 (108)
304 PRK06270 homoserine dehydrogen 21.5 1.3E+02 0.0027 29.6 4.3 57 315-371 82-150 (341)
305 PF12965 DUF3854: Domain of un 21.5 79 0.0017 26.2 2.4 34 316-350 4-37 (130)
306 cd01143 YvrC Periplasmic bindi 21.3 1.7E+02 0.0036 25.5 4.8 41 85-127 50-90 (195)
307 COG0826 Collagenase and relate 21.3 7.2E+02 0.016 24.5 9.4 45 343-387 114-159 (347)
308 COG3195 Uncharacterized protei 21.2 4.1E+02 0.009 22.9 6.5 70 334-404 89-163 (176)
309 COG5547 Small integral membran 20.9 2.8E+02 0.006 19.2 4.4 17 438-454 1-17 (62)
310 cd07038 TPP_PYR_PDC_IPDC_like 20.7 1.3E+02 0.0029 25.8 3.8 26 324-349 61-92 (162)
311 PRK14476 nitrogenase molybdenu 20.7 1.6E+02 0.0034 30.4 4.9 26 97-126 371-396 (455)
312 cd07035 TPP_PYR_POX_like Pyrim 20.6 2.2E+02 0.0048 23.8 5.2 28 322-349 59-92 (155)
313 PLN02293 adenine phosphoribosy 20.5 2.3E+02 0.005 25.1 5.3 33 95-127 60-93 (187)
314 smart00851 MGS MGS-like domain 20.5 1.9E+02 0.0042 21.8 4.3 37 86-123 45-89 (90)
315 TIGR01282 nifD nitrogenase mol 20.4 51 0.0011 34.0 1.3 34 87-125 395-428 (466)
316 PF12606 RELT: Tumour necrosis 20.4 1.4E+02 0.003 20.1 2.9 18 463-480 17-34 (50)
317 TIGR01744 XPRTase xanthine pho 20.2 2.3E+02 0.005 25.2 5.2 34 95-128 48-82 (191)
No 1
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.9e-83 Score=652.83 Aligned_cols=443 Identities=28% Similarity=0.496 Sum_probs=379.8
Q ss_pred ChhhhcCCeEEEEeecCCC--C--CCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQS--S--KIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGE 76 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~--~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (484)
++|++|||+|||+++++.. . ...+++.+.++...+ .+.+...... .+ .........+.........+.
T Consensus 43 ~~La~rGH~VTvi~p~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~ 114 (507)
T PHA03392 43 EALAERGHNVTVIKPTLRVYYASHLCGNITEIDASLSVE-YFKKLVKSSA-VF------RKRGVVADSSTVTADNYMGLV 114 (507)
T ss_pred HHHHHcCCeEEEEecccccccccCCCCCEEEEEcCCChH-HHHHHHhhhh-HH------HhhhhhhhHHHHHHHHHHHHH
Confidence 4899999999999997521 1 257888888864322 2222111000 00 000000011111223334556
Q ss_pred HHHHHHhCCHHHHHHhh-cCCCccEEEEcccchhhHHHHHHHh-CCCEEEEeCCCCchhhHhhhC-CCCCCCccCccccC
Q psy11555 77 DTCEAVMSTKAALDLLH-SSKKYDLIITEVFNTDCFLGFVYKF-KVPYIAVSAAHIIPTAAERFG-IPDNPSYIPNAFLS 153 (484)
Q Consensus 77 ~~c~~~l~~~~l~~~l~-~~~~~DlvI~d~~~~~~~~~~A~~l-~iP~i~~~~~~~~~~~~~~~g-~p~~~s~~P~~~~~ 153 (484)
..|+.++.+++++++|+ ++.+||++|+|.+ ..|++.+|+++ ++|.|.++++...++.....| +|.+|+|+|..++.
T Consensus 115 ~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~-~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg~p~~~syvP~~~~~ 193 (507)
T PHA03392 115 RMISDQFDLPNVKNLIANKNNKFDLLVTEAF-LDYPLVFSHLFGDAPVIQISSGYGLAENFETMGAVSRHPVYYPNLWRS 193 (507)
T ss_pred HHHHHHHCCHHHHHHHhcCCCceeEEEeccc-chhHHHHHHHhCCCCEEEEcCCCCchhHHHhhccCCCCCeeeCCcccC
Confidence 79999999999999995 2568999999987 58999999999 999999999888777777888 99999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCCCCCceEEEcc
Q psy11555 154 YDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRPYPNNVIEVAG 233 (484)
Q Consensus 154 ~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p~~p~v~~vG~ 233 (484)
++++|+|+||+.|++.+.........+. +.++++.++++|.+.+++.++.++++++|+|+++.+++|||++|++++|||
T Consensus 194 ~~~~Msf~~R~~N~~~~~~~~~~~~~~~-~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~rp~~p~v~~vGg 272 (507)
T PHA03392 194 KFGNLNVWETINEIYTELRLYNEFSLLA-DEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNNRPVPPSVQYLGG 272 (507)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCCCCCCCCeeeecc
Confidence 9999999999999987776665555544 888999999998656889999999999999999999999999999999999
Q ss_pred cccCC--CCCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-CCCCcEEEec
Q psy11555 234 LHVKS--PQPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-GKIDKILLKS 310 (484)
Q Consensus 234 ~~~~~--~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-~~~~nv~~~~ 310 (484)
++.++ .+++|+++.+|++.+++|+|||||||..++..++.+.++.+++++++++++|||+++++... +.|+|+.+.+
T Consensus 273 i~~~~~~~~~l~~~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~ 352 (507)
T PHA03392 273 LHLHKKPPQPLDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQK 352 (507)
T ss_pred cccCCCCCCCCCHHHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEec
Confidence 99854 36899999999998877899999999987667889999999999999999999999875554 6799999999
Q ss_pred ccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 311 WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 311 ~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
|+||.+||+||++++||||||.||++||+++|||+|++|+++||+.||+++++.|+|+.++..+++.++|.+||+++++|
T Consensus 353 w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~ 432 (507)
T PHA03392 353 WFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIEN 432 (507)
T ss_pred CCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcC-CCCCcccccCCCcHHHHHHHHHHHHHH
Q psy11555 391 PSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHG-GGAHLRPASLELYWWQYILLDVIIALI 453 (484)
Q Consensus 391 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~-~~~~l~~~~~~~~~~~~~~lDv~~~~~ 453 (484)
++|+++|+++++.++++|.+|.++|++|||+++||+ |++|||+++.+|+|+|||+|||+++++
T Consensus 433 ~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~r~~~g~~~lr~~~~~l~~~qy~~lDv~~~~~ 496 (507)
T PHA03392 433 PKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVIRNKHGNTSLKTKAANVSYSDYFMSYILVPLV 496 (507)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCCCcccccccccCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999986653
No 2
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=4.9e-85 Score=678.18 Aligned_cols=472 Identities=38% Similarity=0.662 Sum_probs=287.8
Q ss_pred ChhhhcCCeEEEEeecC----CCCCCCCceEEeeccchH-HHHHHHhh-hccccCCCCccchhccccCcccccccchhHH
Q psy11555 1 MGLTDHGHVVDILSHFP----QSSKIPNYNDISVEGSMK-LQTNDLLL-SDISYYNPLSDFFFIHQMESPVSNNPLLPIS 74 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~----~~~~~~~~~~i~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (484)
++|++|||+||++++.. ......+++...++.... +...+... ..... +.+..........+.....+.+.
T Consensus 21 ~~L~~rGH~VTvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 97 (500)
T PF00201_consen 21 EELAERGHNVTVLTPSPSSSLNPSKPSNIRFETYPDPYPEEEFEEIFPEFISKF---FSESSFANSFWEMFKMLNAFFDF 97 (500)
T ss_dssp HHHHHH-TTSEEEHHHHHHT------S-CCEEEE-----TT------TTHHHHH---HHHHCCHHHHHHHHHHHHCHHHS
T ss_pred HHHHhcCCceEEEEeecccccccccccceeeEEEcCCcchHHHhhhhHHHHHHH---hhhcccchhHHHHHHHHHHHHHH
Confidence 47999999999999963 112234555555442210 01111000 00000 00000000011122233455666
Q ss_pred HHHHHHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hhCCCCCCCccCccccC
Q psy11555 75 GEDTCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RFGIPDNPSYIPNAFLS 153 (484)
Q Consensus 75 ~~~~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~g~p~~~s~~P~~~~~ 153 (484)
....|+.++.|+++.+.++ +.+||++|+|.+ .+|+..+|+.+++|.+.+.+......... ..|.|.+|+|+|...+.
T Consensus 98 ~~~~C~~~l~d~~l~~~l~-~~~fDlvI~d~f-~~c~~~la~~l~iP~i~~~s~~~~~~~~~~~~g~p~~psyvP~~~s~ 175 (500)
T PF00201_consen 98 FSKSCEDLLSDPELMEQLK-SEKFDLVISDAF-DPCGLALAHYLGIPVIIISSSTPMYDLSSFSGGVPSPPSYVPSMFSD 175 (500)
T ss_dssp ----E--EEEETTSTTHHH-HHHHCT-EEEEE-ESSHHHHHHHHHHTHHHHHHCCSCSCCTCCTSCCCTSTTSTTCBCCC
T ss_pred HHHHHHHHhhHHHHHHHHH-hhccccceEeec-cchhHHHHHHhcCCeEEEecccccchhhhhccCCCCChHHhcccccc
Confidence 7789999999999998888 789999999998 58999999999999876655444443333 34899999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCCCCCceEEEcc
Q psy11555 154 YDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRPYPNNVIEVAG 233 (484)
Q Consensus 154 ~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p~~p~v~~vG~ 233 (484)
+++.|+|+||+.|.+.+.....+......+ +++..+++++.+ .+..++.++.+++++|+++.+++|+|++|++++|||
T Consensus 176 ~~~~msf~~Ri~N~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~l~ns~~~ld~prp~~p~v~~vGg 253 (500)
T PF00201_consen 176 FSDRMSFWQRIKNFLFYLYFRFIFRYFFSP-QDKLYKKYFGFP-FSFRELLSNASLVLINSHPSLDFPRPLLPNVVEVGG 253 (500)
T ss_dssp SGTTSSSST--TTSHHHHHHHHHHHHGGGS--TTS-EEESS-G-GGCHHHHHHHHHCCSSTEEE----HHHHCTSTTGCG
T ss_pred CCCccchhhhhhhhhhhhhhccccccchhh-HHHHHhhhcccc-cccHHHHHHHHHHhhhccccCcCCcchhhcccccCc
Confidence 999999999999999888877776666544 667777777755 345667788899999999999999999999999999
Q ss_pred cccCCCCCCccchHHHhhh-cCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEeccc
Q psy11555 234 LHVKSPQPLPNDIKKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWA 312 (484)
Q Consensus 234 ~~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~ 312 (484)
+++++++++|+++.+|++. +++++|||||||.++ .++.+.++.+++++++++++|||++++.....+++|+++.+|+
T Consensus 254 l~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~--~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~l~~n~~~~~W~ 331 (500)
T PF00201_consen 254 LHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVS--SMPEEKLKEIAEAFENLPQRFIWKYEGEPPENLPKNVLIVKWL 331 (500)
T ss_dssp C-S----TCHHHHHHHTSTTTTTEEEEEE-TSSST--T-HHHHHHHHHHHHHCSTTEEEEEETCSHGCHHHTTEEEESS-
T ss_pred cccccccccccccchhhhccCCCCEEEEecCcccc--hhHHHHHHHHHHHHhhCCCcccccccccccccccceEEEeccc
Confidence 9999889999999999998 568999999999974 4778889999999999999999999986666688999999999
Q ss_pred CcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH
Q psy11555 313 PQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 392 (484)
Q Consensus 313 pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~ 392 (484)
||.|||+||++++||||||+||++||+++|||+|++|+++||+.||+++++.|+|+.++.+++|.++|.++|+++|+|++
T Consensus 332 PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~~~ 411 (500)
T PF00201_consen 332 PQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLENPS 411 (500)
T ss_dssp -HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHSHH
T ss_pred cchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 393 YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALI 472 (484)
Q Consensus 393 ~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
|++||+++++++++||.+|.|+|++||||++||+|++|||+++.+|+|||||+|||++++++++++++++++++++++++
T Consensus 412 y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~~~~~~~~l~~~~~~l~~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~ 491 (500)
T PF00201_consen 412 YKENAKRLSSLFRDRPISPLERAVWWIEYVARHGGAPHLRSPARDLSFYQYYLLDVIAFLLLIILLIIYIIFKICRFVCR 491 (500)
T ss_dssp HHHHHHHHHHTTT-------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCCCcccCChhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888999898888888
Q ss_pred hhccccccc
Q psy11555 473 TYYNTVDDK 481 (484)
Q Consensus 473 ~~~~~~~~~ 481 (484)
+.+...+||
T Consensus 492 ~~~~~~~k~ 500 (500)
T PF00201_consen 492 KCVKKKKKK 500 (500)
T ss_dssp ---------
T ss_pred HHhcccCCC
Confidence 877665544
No 3
>KOG1192|consensus
Probab=100.00 E-value=7.2e-51 Score=422.43 Aligned_cols=375 Identities=33% Similarity=0.586 Sum_probs=312.1
Q ss_pred hHHHHHHHHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccc
Q psy11555 72 PISGEDTCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAF 151 (484)
Q Consensus 72 ~~~~~~~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~ 151 (484)
...+...|...+.++..........+||++|+|.+ ..+...+|.... .+...++.........+|.|.+.+|+|...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~-~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~g~~~~~~~~p~~~ 165 (496)
T KOG1192|consen 89 LLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPF-LGLFLLLAIPSF--VIPLLSFPTSSAVLLALGLPSPLSYVPSPF 165 (496)
T ss_pred HHHHHHHHHHHHhchHHHHHHhhcCCccEEEechh-hHHHHHhcccce--EEEeecccCchHHHHhcCCcCcccccCccc
Confidence 66778899999998654433332455999999987 345555554443 244444555566667889999999999998
Q ss_pred cCCC-CCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCC---CCCHHHhhccccEEEEeccCCCCC-CCCCCC
Q psy11555 152 LSYD-SDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGED---LPPLDQLARNTSLVLVNSHFTFIG-SRPYPN 226 (484)
Q Consensus 152 ~~~~-~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~l~~~~~l~l~ns~~~l~~-~~p~~p 226 (484)
+... +.|++++|..|..................+....++++... .+...++..+.++.++|+++.+++ ++|..+
T Consensus 166 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~ 245 (496)
T KOG1192|consen 166 SLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEPRPLLP 245 (496)
T ss_pred CccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCCCCCCCC
Confidence 7655 89999999999888877776665554455566666665432 145668899999999999999999 788999
Q ss_pred ceEEEcccccCCCC---CCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC-CcEEEEEecCCC----
Q psy11555 227 NVIEVAGLHVKSPQ---PLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGEN---- 298 (484)
Q Consensus 227 ~v~~vG~~~~~~~~---~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~---- 298 (484)
++++|||++....+ +++.++.++++...+++|||||||++.+..++++..+.++.+++++ +.+|+|++.+..
T Consensus 246 ~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~ 325 (496)
T KOG1192|consen 246 KVIPIGPLHVKDSKQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYF 325 (496)
T ss_pred CceEECcEEecCccccccccHHHHHHHhhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhh
Confidence 99999999998543 2455666666664448999999999877789999999999999999 668999998632
Q ss_pred ---CCC-CCCcEEEecccCcccc-cccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCC
Q psy11555 299 ---MSG-KIDKILLKSWAPQRDI-LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 373 (484)
Q Consensus 299 ---~~~-~~~nv~~~~~~pq~~l-l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~ 373 (484)
..+ .++||...+|+||.++ |.|+++++||||||+||++|++++|||+|++|+++||+.||+++++.|.|.++...
T Consensus 326 ~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~ 405 (496)
T KOG1192|consen 326 PEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKR 405 (496)
T ss_pred hhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehh
Confidence 222 2458999999999998 59999999999999999999999999999999999999999999999999999888
Q ss_pred CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCcccccCCCcHHHHHHHHHHHH
Q psy11555 374 QITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIA 451 (484)
Q Consensus 374 ~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~ 451 (484)
+++..++.+++.+++++++|+++++++++.+++||.+| +.+++|+|++.+++++.+++.. .+++|++|+++|++.+
T Consensus 406 ~~~~~~~~~~~~~il~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e~~~~~~~~~~l~~~-~~~~~~~~~~~d~~~~ 481 (496)
T KOG1192|consen 406 DLVSEELLEAIKEILENEEYKEAAKRLSEILRDQPISP-ELAVKWVEFVARHGGAKHLKEA-AHLSFIEYGSLDVIAF 481 (496)
T ss_pred hcCcHHHHHHHHHHHcChHHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHhcCCCcccCcc-ccCChhhhhhhHHHHH
Confidence 88877799999999999999999999999999999999 9999999999999999999988 8999999999999977
No 4
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.6e-39 Score=326.69 Aligned_cols=317 Identities=20% Similarity=0.299 Sum_probs=222.6
Q ss_pred HHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh-----h--CC-CCC--CC-ccCccccCC
Q psy11555 86 KAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER-----F--GI-PDN--PS-YIPNAFLSY 154 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~-----~--g~-p~~--~s-~~P~~~~~~ 154 (484)
+.+.++++ +.++++||+|.++ .|...+|+.+|||.+.+++++........ . |. +.. .. .+|... ..
T Consensus 100 ~~~~~~l~-~~~~~cvI~D~f~-~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-P~ 176 (472)
T PLN02670 100 PPLTTFLE-TSKPDWIIYDYAS-HWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFTVVPPWV-PF 176 (472)
T ss_pred HHHHHHHH-hCCCcEEEECCcc-hhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccccCCCCcC-CC
Confidence 34667776 5579999999985 89999999999999999887764432211 0 10 000 00 011100 00
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcC-hHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-CCCc
Q psy11555 155 DSDMNFVQRMFNSITTLSINLMRKYYYD-PKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP-YPNN 227 (484)
Q Consensus 155 ~~~~sf~~R~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p-~~p~ 227 (484)
.. ...-+....-. . +...... ....... +.. ....+++-+++||...||.. +. ..+.
T Consensus 177 ~~--~~~~~~~dlp~-~----~~~~~~~~~~~~~~~-~~~--------~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~ 240 (472)
T PLN02670 177 ES--NIVFRYHEVTK-Y----VEKTEEDETGPSDSV-RFG--------FAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKP 240 (472)
T ss_pred Cc--cccccHHHhhH-H----HhccCccchHHHHHH-HHH--------hhcccCCEEEEeCHHHHhHHHHHHHHHhhCCC
Confidence 00 00001111000 0 0000000 0011111 111 11234678999999999875 22 2357
Q ss_pred eEEEcccccC--C-CC-C-C----ccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC
Q psy11555 228 VIEVAGLHVK--S-PQ-P-L----PNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE 297 (484)
Q Consensus 228 v~~vG~~~~~--~-~~-~-l----~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 297 (484)
+..|||+... . .. . . .+++.+||+..+ +++|||||||.. .++.+.+++++.+|+..+++|||++.+.
T Consensus 241 v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~---~l~~~q~~ela~gl~~s~~~FlWv~r~~ 317 (472)
T PLN02670 241 IIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEA---SLRREEVTELALGLEKSETPFFWVLRNE 317 (472)
T ss_pred eEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEecccc---cCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 9999999642 1 11 1 1 146889999985 799999999995 4889999999999999999999998752
Q ss_pred -C-----CCCCCCc---------EEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHH
Q psy11555 298 -N-----MSGKIDK---------ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE 362 (484)
Q Consensus 298 -~-----~~~~~~n---------v~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~ 362 (484)
. ...+|+| +.+.+|+||.+||+||++++||||||+||++||+++|||+|++|+++||+.||++++
T Consensus 318 ~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~ 397 (472)
T PLN02670 318 PGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLH 397 (472)
T ss_pred cccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHH
Confidence 1 1124444 777899999999999999999999999999999999999999999999999999999
Q ss_pred HcCcEEEecCC----CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcC
Q psy11555 363 KAGFGVTLPYD----QITEETVLVALRTVLGNP---SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHG 426 (484)
Q Consensus 363 ~~G~g~~l~~~----~~~~~~l~~ai~~~l~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~ 426 (484)
+.|+|+.++.. .++.++|.++|+++|.|+ +||+||+++++.++++ ...+.+++-++..++..
T Consensus 398 ~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~--~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 398 GKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM--DRNNRYVDELVHYLREN 466 (472)
T ss_pred HcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc--chhHHHHHHHHHHHHHh
Confidence 99999999643 389999999999999776 7999999999999996 44566677666666553
No 5
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=4.3e-39 Score=323.32 Aligned_cols=278 Identities=21% Similarity=0.313 Sum_probs=208.8
Q ss_pred ccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hh-CCCCCC-----------CccCccc--cCCCCCCCHHH
Q psy11555 98 YDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RF-GIPDNP-----------SYIPNAF--LSYDSDMNFVQ 162 (484)
Q Consensus 98 ~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~-g~p~~~-----------s~~P~~~--~~~~~~~sf~~ 162 (484)
.++||+|.++ +|...+|+.+|||.+.+.+++....... .. ....++ -.+|... ....+-+++..
T Consensus 116 v~cvV~D~~~-~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~ 194 (468)
T PLN02207 116 VKGFVADFFC-LPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALF 194 (468)
T ss_pred eEEEEECCcc-hHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhc
Confidence 4899999995 8999999999999999988886544321 11 111100 0122210 11111111110
Q ss_pred HHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-------CCCCCceEEEcccc
Q psy11555 163 RMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-------RPYPNNVIEVAGLH 235 (484)
Q Consensus 163 R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-------~p~~p~v~~vG~~~ 235 (484)
. . .......+.. ...++++.+++||++.+|.+ +|..|+++.|||++
T Consensus 195 ~-----------------~-~~~~~~~~~~---------~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~ 247 (468)
T PLN02207 195 V-----------------E-DGYDAYVKLA---------ILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIF 247 (468)
T ss_pred C-----------------C-ccHHHHHHHH---------HhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCc
Confidence 0 0 0001111111 12456789999999999998 67778999999998
Q ss_pred cCCCCCCc-------cchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC------CCC
Q psy11555 236 VKSPQPLP-------NDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------MSG 301 (484)
Q Consensus 236 ~~~~~~l~-------~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~------~~~ 301 (484)
.....+++ +++.+||+..+ +++|||||||.. .++.+.+++++.+++..+++|||++++.. +++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~---~~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~ 324 (468)
T PLN02207 248 DLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMG---RLRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPE 324 (468)
T ss_pred ccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCc---CCCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCH
Confidence 64332222 56999999885 799999999986 48899999999999999999999998422 111
Q ss_pred -----CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHH-cCcEEEec----
Q psy11555 302 -----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLP---- 371 (484)
Q Consensus 302 -----~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~~l~---- 371 (484)
.++|..+.+|+||.++|+||++++||||||+||++||+++|||||++|+++||+.||+++++ .|+|+.+.
T Consensus 325 ~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~ 404 (468)
T PLN02207 325 GFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYR 404 (468)
T ss_pred HHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccc
Confidence 45788899999999999999999999999999999999999999999999999999998777 89998663
Q ss_pred --C-CCCCHHHHHHHHHHHhC--CHHHHHHHHHHHHHHhC
Q psy11555 372 --Y-DQITEETVLVALRTVLG--NPSYKKRAEKVARLFQD 406 (484)
Q Consensus 372 --~-~~~~~~~l~~ai~~~l~--~~~~~~~a~~~~~~~~~ 406 (484)
. ..++.++|.++|+++++ +++||+||+++++++++
T Consensus 405 ~~~~~~v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~ 444 (468)
T PLN02207 405 VHSDEIVNANEIETAIRCVMNKDNNVVRKRVMDISQMIQR 444 (468)
T ss_pred cccCCcccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 1 23589999999999997 68999999999998874
No 6
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=1.7e-39 Score=325.64 Aligned_cols=304 Identities=16% Similarity=0.241 Sum_probs=213.8
Q ss_pred HHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhh--CC-CCCCCccCccc--cCCCCCCCH
Q psy11555 86 KAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERF--GI-PDNPSYIPNAF--LSYDSDMNF 160 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~--g~-p~~~s~~P~~~--~~~~~~~sf 160 (484)
+.++++++ +.++|+||+| + ..|...+|..+|||.+.+++++......... +. ..+...+|... ....+-.++
T Consensus 97 ~~l~~~L~-~~~~~cVV~D-~-~~wa~~vA~e~giP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp~~~~~~~~~~~~~~ 173 (442)
T PLN02208 97 DQVEAAVR-ALRPDLIFFD-F-AQWIPEMAKEHMIKSVSYIIVSATTIAHTHVPGGKLGVPPPGYPSSKVLFRENDAHAL 173 (442)
T ss_pred HHHHHHHh-hCCCeEEEEC-C-cHhHHHHHHHhCCCEEEEEhhhHHHHHHHccCccccCCCCCCCCCcccccCHHHcCcc
Confidence 34777776 6689999999 5 3789999999999999988887654332111 00 00101111100 000000011
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC------CCCCCceEEEccc
Q psy11555 161 VQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS------RPYPNNVIEVAGL 234 (484)
Q Consensus 161 ~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~------~p~~p~v~~vG~~ 234 (484)
.+.. .......++. .+....++-+++||...+|.. ++..|+++.|||+
T Consensus 174 -~~~~-----------------~~~~~~~~~~--------~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl 227 (442)
T PLN02208 174 -ATLS-----------------IFYKRLYHQI--------TTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPM 227 (442)
T ss_pred -cccc-----------------hHHHHHHHHH--------HhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeec
Confidence 0000 0000111111 012334678999999999863 5667899999999
Q ss_pred ccCCC--CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHH--HhcCCcEEEEEecCC---CCCCCC---
Q psy11555 235 HVKSP--QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRA--FEQIPQRVIWKWEGE---NMSGKI--- 303 (484)
Q Consensus 235 ~~~~~--~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a--~~~~~~~~i~~~~~~---~~~~~~--- 303 (484)
+...+ +++++++.+||+..+ +++|||||||... ++.+.+.+++.+ ++..+..++|+.+.+ ....+|
T Consensus 228 ~~~~~~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~---l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f 304 (442)
T PLN02208 228 FPEPDTSKPLEEQWSHFLSGFPPKSVVFCSLGSQII---LEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGF 304 (442)
T ss_pred ccCcCCCCCCHHHHHHHHhcCCCCcEEEEecccccc---CCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHH
Confidence 87543 457789999999875 7999999999963 677766666665 445555555554311 112244
Q ss_pred ------CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHH-cCcEEEecCCC--
Q psy11555 304 ------DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQ-- 374 (484)
Q Consensus 304 ------~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~~-- 374 (484)
.|+.+.+|+||.+||+||++++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.++.++
T Consensus 305 ~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~ 384 (442)
T PLN02208 305 EERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTG 384 (442)
T ss_pred HHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCC
Confidence 688888999999999999999999999999999999999999999999999999998776 89999997654
Q ss_pred -CCHHHHHHHHHHHhCCHH-----HHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q psy11555 375 -ITEETVLVALRTVLGNPS-----YKKRAEKVARLFQDRPMPPLDTAIYWIEHV 422 (484)
Q Consensus 375 -~~~~~l~~ai~~~l~~~~-----~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~ 422 (484)
++.++|.++|++++++++ +|++++++++.+.+. -++-...-..|+.+
T Consensus 385 ~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~~~-gsS~~~l~~~v~~l 437 (442)
T PLN02208 385 WFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILVSP-GLLTGYVDKFVEEL 437 (442)
T ss_pred cCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHH
Confidence 899999999999997653 999999999988653 44445555556554
No 7
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=7.2e-39 Score=322.88 Aligned_cols=199 Identities=23% Similarity=0.344 Sum_probs=169.9
Q ss_pred ccccEEEEeccCCCCCC----------CCCCCceEEEcccccCCC----CC--Ccc--chHHHhhhcC-ceEEEEeecce
Q psy11555 205 RNTSLVLVNSHFTFIGS----------RPYPNNVIEVAGLHVKSP----QP--LPN--DIKKFLDESV-NGVIYFSMGSI 265 (484)
Q Consensus 205 ~~~~l~l~ns~~~l~~~----------~p~~p~v~~vG~~~~~~~----~~--l~~--~l~~~l~~~~-~~~v~vs~Gs~ 265 (484)
.+++.+++||...||.. +|..|+++.|||++.... ++ +++ ++.+||+..+ +++|||||||.
T Consensus 204 ~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~ 283 (448)
T PLN02562 204 KSLRWILMNSFKDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSW 283 (448)
T ss_pred ccCCEEEEcChhhhCHHHHHHHHhhhccccCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEeccc
Confidence 34568999999999873 466789999999986532 11 233 4569999985 68999999998
Q ss_pred eccCCCChHHHHHHHHHHhcCCcEEEEEecCC---CCCC-----CCCcEEEecccCcccccccCceeEEEecCCcchHHH
Q psy11555 266 IQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---NMSG-----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTE 337 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~---~~~~-----~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~E 337 (484)
. ..++.+.++.++.++++.+++|||++... .+++ .++|+.+.+|+||.+||.|+++++||||||+||++|
T Consensus 284 ~--~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~E 361 (448)
T PLN02562 284 V--SPIGESNVRTLALALEASGRPFIWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTME 361 (448)
T ss_pred c--cCCCHHHHHHHHHHHHHCCCCEEEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHH
Confidence 5 24788999999999999999999998641 2332 467999999999999999999999999999999999
Q ss_pred HHhcCCceeeccCCCchHHHHHHHHH-cCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCC
Q psy11555 338 ALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDR 407 (484)
Q Consensus 338 al~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~ 407 (484)
|+++|||+|++|+++||+.||+++++ .|+|+.+. +++.+++.++|+++|+|++||+||+++++..+..
T Consensus 362 al~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~--~~~~~~l~~~v~~~l~~~~~r~~a~~l~~~~~~~ 430 (448)
T PLN02562 362 AIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS--GFGQKEVEEGLRKVMEDSGMGERLMKLRERAMGE 430 (448)
T ss_pred HHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC--CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999987 59998873 5799999999999999999999999999988663
No 8
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.2e-38 Score=321.70 Aligned_cols=297 Identities=19% Similarity=0.316 Sum_probs=210.1
Q ss_pred ccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hh----CC---C-----CC--CCccCccc--cCCCCCCCH
Q psy11555 98 YDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RF----GI---P-----DN--PSYIPNAF--LSYDSDMNF 160 (484)
Q Consensus 98 ~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~----g~---p-----~~--~s~~P~~~--~~~~~~~sf 160 (484)
.++||+|.++ .|...+|+.+|||.+.+++++....... .. +. + .. +-.+|.+. ....+-.++
T Consensus 113 v~cvV~D~f~-~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~ 191 (481)
T PLN02554 113 LAGFVVDMFC-TSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSV 191 (481)
T ss_pred eEEEEECCcc-hhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCc
Confidence 3899999885 8999999999999999998887554322 11 00 0 00 01133321 111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----C---CCCCceEEEc
Q psy11555 161 VQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----R---PYPNNVIEVA 232 (484)
Q Consensus 161 ~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~---p~~p~v~~vG 232 (484)
... .. .. ..+.+.. .....++-+++||...++.. . +..|+++.||
T Consensus 192 ~~~-~~---------~~---------~~~~~~~--------~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vG 244 (481)
T PLN02554 192 LLS-KE---------WL---------PLFLAQA--------RRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVG 244 (481)
T ss_pred ccC-HH---------HH---------HHHHHHH--------HhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeC
Confidence 100 00 00 0001110 01223456777777666642 1 2446899999
Q ss_pred cc-ccCCC-----CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC-------
Q psy11555 233 GL-HVKSP-----QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------- 298 (484)
Q Consensus 233 ~~-~~~~~-----~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~------- 298 (484)
|+ ++..+ .++++++.+|++..+ +++|||||||.. .++.+.+++++.+++..+++|||++++..
T Consensus 245 pl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~---~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~ 321 (481)
T PLN02554 245 PVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMG---GFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEP 321 (481)
T ss_pred CCccccccccccccccchHHHHHHhcCCCCcEEEEeccccc---cCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccc
Confidence 99 44332 235568999999975 689999999983 47889999999999999999999986410
Q ss_pred ----------CCC-----CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHH-HHHH
Q psy11555 299 ----------MSG-----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI-RVVE 362 (484)
Q Consensus 299 ----------~~~-----~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na-~~~~ 362 (484)
+++ ..+|+++.+|+||.+||+||++++||||||+||++||+++|||||++|+++||+.|| .+++
T Consensus 322 ~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~ 401 (481)
T PLN02554 322 PGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVE 401 (481)
T ss_pred cccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHH
Confidence 111 345788899999999999999999999999999999999999999999999999999 4578
Q ss_pred HcCcEEEecC-----------CCCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHc
Q psy11555 363 KAGFGVTLPY-----------DQITEETVLVALRTVLG-NPSYKKRAEKVARLFQDR---PMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 363 ~~G~g~~l~~-----------~~~~~~~l~~ai~~~l~-~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~ie~~~~~ 425 (484)
+.|+|+.++. ..++.++|.++|+++|+ |++||++|+++++++++. --+........|+++.++
T Consensus 402 ~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~~ 479 (481)
T PLN02554 402 ELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTKN 479 (481)
T ss_pred HhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Confidence 8999999863 36799999999999996 789999999999988742 122333455666665543
No 9
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.6e-37 Score=308.95 Aligned_cols=279 Identities=20% Similarity=0.313 Sum_probs=205.7
Q ss_pred CccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh-----h--C--CCCC------CCccCcccc-CCCCCCCH
Q psy11555 97 KYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER-----F--G--IPDN------PSYIPNAFL-SYDSDMNF 160 (484)
Q Consensus 97 ~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~-----~--g--~p~~------~s~~P~~~~-~~~~~~sf 160 (484)
++++||+|.++ +|...+|+.+|||.+.+++++........ . + .|.. +-.+|.... ...+-.++
T Consensus 105 p~~cVI~D~f~-~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~ 183 (451)
T PLN02410 105 EIACVVYDEFM-YFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVS 183 (451)
T ss_pred CcEEEEECCcc-hHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCcch
Confidence 57999999995 89999999999999999988865442211 1 1 0100 011222110 00010010
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-CCCceEEEccc
Q psy11555 161 VQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP-YPNNVIEVAGL 234 (484)
Q Consensus 161 ~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p-~~p~v~~vG~~ 234 (484)
. .. ........++... ..+.++.+++||...+|.. +. ..++++.|||+
T Consensus 184 ~---~~--------------~~~~~~~~~~~~~---------~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl 237 (451)
T PLN02410 184 H---WA--------------SLESIMELYRNTV---------DKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPL 237 (451)
T ss_pred h---cC--------------CcHHHHHHHHHHh---------hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEeccc
Confidence 0 00 0000001111110 1245678999999999865 22 34679999999
Q ss_pred ccCC--CCCCc---cchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC-----C----C
Q psy11555 235 HVKS--PQPLP---NDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-----N----M 299 (484)
Q Consensus 235 ~~~~--~~~l~---~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~-----~----~ 299 (484)
+... +++++ .++.+||+..+ +++|||||||... ++.+.+++++.+|+..+++|+|++... + +
T Consensus 238 ~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~---~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~l 314 (451)
T PLN02410 238 HLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLAL---MEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESL 314 (451)
T ss_pred ccccCCCccccccchHHHHHHHhCCCCcEEEEEcccccc---CCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcC
Confidence 8643 22333 34689999975 7999999999963 788999999999999999999998732 1 1
Q ss_pred CC-----CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc-CcEEEecCC
Q psy11555 300 SG-----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYD 373 (484)
Q Consensus 300 ~~-----~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~-G~g~~l~~~ 373 (484)
++ .++|..+.+|+||.++|.|+++++||||||+||++||+++|||+|++|+++||+.||+++++. |+|+.+. +
T Consensus 315 p~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~ 393 (451)
T PLN02410 315 PKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-G 393 (451)
T ss_pred ChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-C
Confidence 21 457889999999999999999999999999999999999999999999999999999999876 9999997 6
Q ss_pred CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHhC
Q psy11555 374 QITEETVLVALRTVLGNP---SYKKRAEKVARLFQD 406 (484)
Q Consensus 374 ~~~~~~l~~ai~~~l~~~---~~~~~a~~~~~~~~~ 406 (484)
.++.++|.++|++++.++ ++|+++++++++++.
T Consensus 394 ~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~ 429 (451)
T PLN02410 394 DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRA 429 (451)
T ss_pred cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 889999999999999775 699999999888764
No 10
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=1.7e-36 Score=305.12 Aligned_cols=366 Identities=19% Similarity=0.251 Sum_probs=250.6
Q ss_pred ChhhhcCCeEEEEeecC--CCCCCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFP--QSSKIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|.+|||+||++++.. ......+++++.++...+. . +..+ .. .. .....+.+.....
T Consensus 17 ~~L~~~Gh~V~~~~~~~~~~~v~~~G~~~~~~~~~~~~-~-~~~~-------------~~---~~--~~~~~~~~~~~~~ 76 (392)
T TIGR01426 17 EELVARGHRVTYATTEEFAERVEAAGAEFVLYGSALPP-P-DNPP-------------EN---TE--EEPIDIIEKLLDE 76 (392)
T ss_pred HHHHhCCCeEEEEeCHHHHHHHHHcCCEEEecCCcCcc-c-cccc-------------cc---cC--cchHHHHHHHHHH
Confidence 47999999999999942 2223457887777644221 0 0000 00 00 1111123333444
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCC
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDM 158 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~ 158 (484)
+...+ +.+.+.++ ..+||+||+|.+ ..++..+|+.+|||+|.+++...... .+ +...|. ....+
T Consensus 77 ~~~~~--~~l~~~~~-~~~pDlVi~d~~-~~~~~~~A~~~giP~v~~~~~~~~~~---~~-----~~~~~~----~~~~~ 140 (392)
T TIGR01426 77 AEDVL--PQLEEAYK-GDRPDLIVYDIA-SWTGRLLARKWDVPVISSFPTFAANE---EF-----EEMVSP----AGEGS 140 (392)
T ss_pred HHHHH--HHHHHHhc-CCCCCEEEECCc-cHHHHHHHHHhCCCEEEEehhhcccc---cc-----cccccc----cchhh
Confidence 44444 34666776 779999999987 46888899999999998865432110 00 000010 01000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhh-ccccEEEEeccCCCCCCC-CCCCceEEEccccc
Q psy11555 159 NFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLA-RNTSLVLVNSHFTFIGSR-PYPNNVIEVAGLHV 236 (484)
Q Consensus 159 sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~-~~~~l~l~ns~~~l~~~~-p~~p~v~~vG~~~~ 236 (484)
....+..+. ....+ ....++.+++ +|.+.++...+. ...++.+..+.+.++++. .++++++++|++..
T Consensus 141 ~~~~~~~~~-------~~~~~--~~~~~~~r~~-~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~ 210 (392)
T TIGR01426 141 AEEGAIAER-------GLAEY--VARLSALLEE-HGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIG 210 (392)
T ss_pred hhhhccccc-------hhHHH--HHHHHHHHHH-hCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCC
Confidence 000000000 00111 1334444444 464323434432 334457777777787765 47889999999765
Q ss_pred CCCCCCccchHHHhhh-cCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----CCCCCCCcEEEecc
Q psy11555 237 KSPQPLPNDIKKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW 311 (484)
Q Consensus 237 ~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~~~~~~nv~~~~~ 311 (484)
.... ...|... .++++||+++||... ...+.++.+++++.+.+.+++|..++. .....++|+.+.+|
T Consensus 211 ~~~~-----~~~~~~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~ 282 (392)
T TIGR01426 211 DRKE-----DGSWERPGDGRPVVLISLGTVFN---NQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQW 282 (392)
T ss_pred Cccc-----cCCCCCCCCCCCEEEEecCccCC---CCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCC
Confidence 4321 1124433 347899999999743 334588899999999999988887653 23346889999999
Q ss_pred cCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 312 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 312 ~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
+|+.+++ ++++++|||||.||+.||+++|+|+|++|...||..||+++++.|+|..+...+++.++|.++|+++++|+
T Consensus 283 ~p~~~ll--~~~~~~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~ 360 (392)
T TIGR01426 283 VPQLEIL--KKADAFITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDP 360 (392)
T ss_pred CCHHHHH--hhCCEEEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCH
Confidence 9999999 67999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 392 SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 392 ~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+|+++++++++.++. .++.+.++++||.+++
T Consensus 361 ~~~~~~~~l~~~~~~--~~~~~~aa~~i~~~~~ 391 (392)
T TIGR01426 361 RYAERLRKMRAEIRE--AGGARRAADEIEGFLA 391 (392)
T ss_pred HHHHHHHHHHHHHHH--cCCHHHHHHHHHHhhc
Confidence 999999999999987 5789999999998765
No 11
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.5e-37 Score=314.54 Aligned_cols=296 Identities=21% Similarity=0.320 Sum_probs=207.7
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hhCCCCCCCccCc---c--ccCCCCCCCH
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RFGIPDNPSYIPN---A--FLSYDSDMNF 160 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~g~p~~~s~~P~---~--~~~~~~~~sf 160 (484)
.+.++++ +.++|+||+|.++ .|+..+|+.+|||.+.+++++.+..... .+....+....+. . ..++...+.+
T Consensus 113 ~l~~~l~-~~~~~~IV~D~~~-~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~p~~~~~ 190 (482)
T PLN03007 113 QLEKLLE-TTRPDCLVADMFF-PWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFVIPDLPGDIVI 190 (482)
T ss_pred HHHHHHh-cCCCCEEEECCcc-hhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCceeeCCCCCCcccc
Confidence 4667776 6689999999995 8999999999999999888775433211 1111111111110 0 0011000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-CCCceEEEccc
Q psy11555 161 VQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP-YPNNVIEVAGL 234 (484)
Q Consensus 161 ~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p-~~p~v~~vG~~ 234 (484)
+.... .. . ... ..+.+.+ ....+...+++.+++||+..++.+ +. ..+.++.|||+
T Consensus 191 --~~~~~---------~~--~-~~~-~~~~~~~----~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl 251 (482)
T PLN03007 191 --TEEQI---------ND--A-DEE-SPMGKFM----KEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPL 251 (482)
T ss_pred --CHHhc---------CC--C-CCc-hhHHHHH----HHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccc
Confidence 00000 00 0 000 0111111 223334566789999999888765 22 22469999997
Q ss_pred ccCC---------CCCC---ccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----
Q psy11555 235 HVKS---------PQPL---PNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE---- 297 (484)
Q Consensus 235 ~~~~---------~~~l---~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~---- 297 (484)
.... +++. ++++.+|++..+ +++|||||||... .+.+.+.+++.+++..+++|||+++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~---~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~ 328 (482)
T PLN03007 252 SLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVAS---FKNEQLFEIAAGLEGSGQNFIWVVRKNENQG 328 (482)
T ss_pred cccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcC---CCHHHHHHHHHHHHHCCCCEEEEEecCCccc
Confidence 5421 1111 356899999875 8999999999953 667889999999999999999998742
Q ss_pred ----CCCC------CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHH---Hc
Q psy11555 298 ----NMSG------KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE---KA 364 (484)
Q Consensus 298 ----~~~~------~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~---~~ 364 (484)
.+++ .+.|+.+.+|+||.+||.|+++++||||||+||++||+++|||+|++|+++||+.||++++ +.
T Consensus 329 ~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~ 408 (482)
T PLN03007 329 EKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRT 408 (482)
T ss_pred chhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcc
Confidence 1221 2568899999999999999999999999999999999999999999999999999999886 45
Q ss_pred CcEEEe------cCCCCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHhC
Q psy11555 365 GFGVTL------PYDQITEETVLVALRTVLGNP---SYKKRAEKVARLFQD 406 (484)
Q Consensus 365 G~g~~l------~~~~~~~~~l~~ai~~~l~~~---~~~~~a~~~~~~~~~ 406 (484)
|+|+.. +...++.++|.++|++++.|+ +||++|++++++.+.
T Consensus 409 G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~ 459 (482)
T PLN03007 409 GVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKA 459 (482)
T ss_pred eeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 555532 335689999999999999887 899999999987765
No 12
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=2.4e-36 Score=301.38 Aligned_cols=313 Identities=16% Similarity=0.171 Sum_probs=220.2
Q ss_pred CHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccc-----cCCCCCCC
Q psy11555 85 TKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAF-----LSYDSDMN 159 (484)
Q Consensus 85 ~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~-----~~~~~~~s 159 (484)
.+.+.++|+ ..++|+||+| + ..|...+|+.+|||.+.+++++..............+..+|... ....+.++
T Consensus 97 ~~~~~~~l~-~~~~~~iV~D-~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp~~~v~l~~~~l~~ 173 (453)
T PLN02764 97 RDQVEVVVR-AVEPDLIFFD-F-AHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVPPPGYPSSKVLLRKQDAYT 173 (453)
T ss_pred HHHHHHHHH-hCCCCEEEEC-C-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCCCCCCCCCcccCcHhhCcc
Confidence 455777886 5578999999 4 47999999999999999998887555433211000000112110 00001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCC-CCceEEEcc
Q psy11555 160 FVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPY-PNNVIEVAG 233 (484)
Q Consensus 160 f~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~-~p~v~~vG~ 233 (484)
+.+ +. .............+.. ...++++-+++||..++|.. +.. .+++..|||
T Consensus 174 ~~~-~~------------~~~~~~~~~~~~~~~~--------~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGP 232 (453)
T PLN02764 174 MKN-LE------------PTNTIDVGPNLLERVT--------TSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGP 232 (453)
T ss_pred hhh-cC------------CCccchhHHHHHHHHH--------HhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEecc
Confidence 100 00 0000000001111111 11345678999999999865 222 357999999
Q ss_pred cccCCC--CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----C-CCCCC--
Q psy11555 234 LHVKSP--QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----N-MSGKI-- 303 (484)
Q Consensus 234 ~~~~~~--~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~-~~~~~-- 303 (484)
+..... ...++++.+|||..+ +++|||||||... ++.+.+.+++.+|+..+.+|+|++... . ...+|
T Consensus 233 L~~~~~~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~---~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~ 309 (453)
T PLN02764 233 VFPEPDKTRELEERWVKWLSGYEPDSVVFCALGSQVI---LEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEG 309 (453)
T ss_pred CccCccccccchhHHHHHHhCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcc
Confidence 964321 223467999999985 8999999999954 788999999999999999999998731 1 11233
Q ss_pred -------CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHH-cCcEEEecCC--
Q psy11555 304 -------DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYD-- 373 (484)
Q Consensus 304 -------~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~-- 373 (484)
.++.+.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.+..+
T Consensus 310 f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 310 FEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred hHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 345667999999999999999999999999999999999999999999999999999964 7999887543
Q ss_pred -CCCHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 374 -QITEETVLVALRTVLGNP-----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 374 -~~~~~~l~~ai~~~l~~~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
.++.++|.++|+++++++ .+|++++++++.+++. -++-......|+++.+.
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~-GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASP-GLLTGYVDNFIESLQDL 446 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHh
Confidence 589999999999999764 3999999999999774 34445566777776665
No 13
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.2e-36 Score=306.97 Aligned_cols=293 Identities=18% Similarity=0.315 Sum_probs=207.3
Q ss_pred CHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh-h--C-CCCC-------CCccCccccC
Q psy11555 85 TKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER-F--G-IPDN-------PSYIPNAFLS 153 (484)
Q Consensus 85 ~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~-~--g-~p~~-------~s~~P~~~~~ 153 (484)
.+.+.++++ +.++|+||+|.++ .|+..+|+.+|||.+.+++.....+.... . + .+.+ +-.+|..
T Consensus 92 ~~~l~~~l~-~~~~~~vI~D~~~-~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl--- 166 (456)
T PLN02210 92 AKNLSKIIE-EKRYSCIISSPFT-PWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVELPAL--- 166 (456)
T ss_pred hHHHHHHHh-cCCCcEEEECCcc-hhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeeeCCCC---
Confidence 345777886 6689999999985 79999999999999988777664432211 1 0 0100 0011211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCCCCce
Q psy11555 154 YDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPYPNNV 228 (484)
Q Consensus 154 ~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~~p~v 228 (484)
..+ +.......+ ... .........++. .+.....+.+++||...+|.. +.. +++
T Consensus 167 --~~~----~~~dl~~~~-----~~~-~~~~~~~~~~~~--------~~~~~~~~~vlvNTf~eLE~~~~~~l~~~-~~v 225 (456)
T PLN02210 167 --PLL----EVRDLPSFM-----LPS-GGAHFNNLMAEF--------ADCLRYVKWVLVNSFYELESEIIESMADL-KPV 225 (456)
T ss_pred --CCC----ChhhCChhh-----hcC-CchHHHHHHHHH--------HHhcccCCEEEEeCHHHHhHHHHHHHhhc-CCE
Confidence 000 111100000 000 000011111111 111234578999999998864 222 579
Q ss_pred EEEcccccC----C-CC-----------CCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEE
Q psy11555 229 IEVAGLHVK----S-PQ-----------PLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVI 291 (484)
Q Consensus 229 ~~vG~~~~~----~-~~-----------~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i 291 (484)
..|||+... . .. ..++++.+|++..+ +++|||||||... .+.+.+++++.+++..+++||
T Consensus 226 ~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~---~~~~~~~e~a~~l~~~~~~fl 302 (456)
T PLN02210 226 IPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLE---SLENQVETIAKALKNRGVPFL 302 (456)
T ss_pred EEEcccCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCCCCEE
Confidence 999998631 1 10 11345789999875 7899999999854 678999999999999999999
Q ss_pred EEecCCCC---C----C-C-CCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHH
Q psy11555 292 WKWEGENM---S----G-K-IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE 362 (484)
Q Consensus 292 ~~~~~~~~---~----~-~-~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~ 362 (484)
|+++.... . + . +++..+.+|+||.++|.|+++++||||||+||++||+++|||+|++|+++||+.||++++
T Consensus 303 w~~~~~~~~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~ 382 (456)
T PLN02210 303 WVIRPKEKAQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLV 382 (456)
T ss_pred EEEeCCccccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHH
Confidence 99864211 1 1 1 366678899999999999999999999999999999999999999999999999999999
Q ss_pred H-cCcEEEecC----CCCCHHHHHHHHHHHhCCHH---HHHHHHHHHHHHhC
Q psy11555 363 K-AGFGVTLPY----DQITEETVLVALRTVLGNPS---YKKRAEKVARLFQD 406 (484)
Q Consensus 363 ~-~G~g~~l~~----~~~~~~~l~~ai~~~l~~~~---~~~~a~~~~~~~~~ 406 (484)
+ .|+|+.+.. ..++.++|.++|++++.+++ +|+||+++++..+.
T Consensus 383 ~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~ 434 (456)
T PLN02210 383 DVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARL 434 (456)
T ss_pred HHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 8 899999863 25899999999999997764 99999999887654
No 14
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=2.7e-36 Score=302.15 Aligned_cols=281 Identities=17% Similarity=0.267 Sum_probs=205.2
Q ss_pred CccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hh---CCCC--C------CCccCcccc-CCCCCCCHHHH
Q psy11555 97 KYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RF---GIPD--N------PSYIPNAFL-SYDSDMNFVQR 163 (484)
Q Consensus 97 ~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~---g~p~--~------~s~~P~~~~-~~~~~~sf~~R 163 (484)
++++||+|.++ +|...+|+++|||.+.+++++....... .. ..+. . +-.+|.... ...+-.++..
T Consensus 112 pv~cII~D~~~-~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~- 189 (451)
T PLN03004 112 NVRAMIIDFFC-TAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVL- 189 (451)
T ss_pred CceEEEECCcc-hhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccccccccccccCCeecCCCCCCCChHHCchhhc-
Confidence 45999999985 8999999999999999998886544322 11 1010 0 011222110 0001111110
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-C-CCceEEEccccc
Q psy11555 164 MFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP-Y-PNNVIEVAGLHV 236 (484)
Q Consensus 164 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p-~-~p~v~~vG~~~~ 236 (484)
-.+ ......+.+.. ....+++-+++||...+|.. ++ . .+++..|||+..
T Consensus 190 ~~~----------------~~~~~~~~~~~--------~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~ 245 (451)
T PLN03004 190 ERD----------------DEVYDVFIMFG--------KQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIV 245 (451)
T ss_pred CCc----------------hHHHHHHHHHH--------HhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeecc
Confidence 000 00001111111 11234567999999999874 22 2 257999999964
Q ss_pred CCC---CCC--ccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC--------CCCC-
Q psy11555 237 KSP---QPL--PNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--------NMSG- 301 (484)
Q Consensus 237 ~~~---~~l--~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~--------~~~~- 301 (484)
... ... +.++.+||+..+ +++|||||||.. .++.+.+++++.+|+..+++|||++..+ ....
T Consensus 246 ~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~---~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~ 322 (451)
T PLN03004 246 NGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLG---LFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSL 322 (451)
T ss_pred CccccccccchhhHHHHHHHhCCCCceEEEEecccc---cCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccccchhhh
Confidence 221 111 245889999885 799999999994 4889999999999999999999999852 1122
Q ss_pred CC---------CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHH-cCcEEEec
Q psy11555 302 KI---------DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLP 371 (484)
Q Consensus 302 ~~---------~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~~l~ 371 (484)
+| .|+.+.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+.++
T Consensus 323 lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~ 402 (451)
T PLN03004 323 LPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMN 402 (451)
T ss_pred CChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEec
Confidence 44 689999999999999999999999999999999999999999999999999999999986 69999997
Q ss_pred CC---CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy11555 372 YD---QITEETVLVALRTVLGNPSYKKRAEKVARLFQD 406 (484)
Q Consensus 372 ~~---~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~ 406 (484)
.+ .++.++|.++|+++++|++||+++++++++.+.
T Consensus 403 ~~~~~~~~~e~l~~av~~vm~~~~~r~~a~~~~~~a~~ 440 (451)
T PLN03004 403 ESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAEL 440 (451)
T ss_pred CCcCCccCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 43 479999999999999999999999999987654
No 15
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=1.1e-35 Score=299.27 Aligned_cols=293 Identities=18% Similarity=0.259 Sum_probs=207.6
Q ss_pred HHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh-h-C--CCCC--------CCccCcccc
Q psy11555 86 KAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER-F-G--IPDN--------PSYIPNAFL 152 (484)
Q Consensus 86 ~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~-~-g--~p~~--------~s~~P~~~~ 152 (484)
+.+.++|++ ..++++||+|.++ +|...+|+.+|||.+.+++++........ . . .+.. +-.+|..
T Consensus 92 ~~~~~~l~~~~~~p~cvV~D~f~-~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~-- 168 (481)
T PLN02992 92 PTLRSKIAEMHQKPTALIVDLFG-TDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGC-- 168 (481)
T ss_pred HHHHHHHHhcCCCCeEEEECCcc-hhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCCCCcccCCC--
Confidence 456677752 2478999999985 89999999999999999888765432111 1 0 0100 0011211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC----
Q psy11555 153 SYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP---- 223 (484)
Q Consensus 153 ~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p---- 223 (484)
..+ |.......+ ... .........+ .+ ....+++-+++||...||.. +.
T Consensus 169 ---~~l----~~~dlp~~~-----~~~-~~~~~~~~~~-~~--------~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~ 226 (481)
T PLN02992 169 ---EPV----RFEDTLDAY-----LVP-DEPVYRDFVR-HG--------LAYPKADGILVNTWEEMEPKSLKSLQDPKLL 226 (481)
T ss_pred ---Ccc----CHHHhhHhh-----cCC-CcHHHHHHHH-HH--------HhcccCCEEEEechHHHhHHHHHHHhhcccc
Confidence 001 111100000 000 0000111111 11 11345678999999998864 11
Q ss_pred ---CCCceEEEcccccCC-CCCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC-
Q psy11555 224 ---YPNNVIEVAGLHVKS-PQPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE- 297 (484)
Q Consensus 224 ---~~p~v~~vG~~~~~~-~~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~- 297 (484)
..+.+..|||+.... ...-++++.+||+..+ +++|||||||.. .++.+.+++++.+|+..+++|||++...
T Consensus 227 ~~~~~~~v~~VGPl~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~---~l~~~q~~ela~gL~~s~~~flW~~r~~~ 303 (481)
T PLN02992 227 GRVARVPVYPIGPLCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGG---SLSAKQLTELAWGLEMSQQRFVWVVRPPV 303 (481)
T ss_pred ccccCCceEEecCccCCcCCCcchHHHHHHHHcCCCCceEEEeecccc---cCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 125699999996432 2222356899999875 799999999994 5899999999999999999999999521
Q ss_pred -----------------C--CCCCCC---------cEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeecc
Q psy11555 298 -----------------N--MSGKID---------KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIP 349 (484)
Q Consensus 298 -----------------~--~~~~~~---------nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P 349 (484)
. ...+|+ ++.+.+|+||.+||.|+++++||||||+||++||+++|||+|++|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P 383 (481)
T PLN02992 304 DGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP 383 (481)
T ss_pred ccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC
Confidence 0 112444 488899999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHH-HcCcEEEecC--CCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHhC
Q psy11555 350 MFGDQKANIRVVE-KAGFGVTLPY--DQITEETVLVALRTVLGN---PSYKKRAEKVARLFQD 406 (484)
Q Consensus 350 ~~~dQ~~na~~~~-~~G~g~~l~~--~~~~~~~l~~ai~~~l~~---~~~~~~a~~~~~~~~~ 406 (484)
+++||+.||++++ +.|+|+.++. ..++.++|.++|++++.+ .+++++++++++..+.
T Consensus 384 ~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~ 446 (481)
T PLN02992 384 LFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEM 446 (481)
T ss_pred ccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 9999999999994 8999999976 348999999999999976 3688888888776654
No 16
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=1.5e-35 Score=299.48 Aligned_cols=372 Identities=18% Similarity=0.177 Sum_probs=245.2
Q ss_pred ChhhhcCCeEEEEeecC--CCCCCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFP--QSSKIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|.+|||+|+++|+.. ......+++++.++.............. ... .............+...
T Consensus 22 ~~L~~rGh~V~~~t~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~---------~~~----~~~~~~~~~~~~~~~~~ 88 (401)
T cd03784 22 WALRAAGHEVRVATPPEFADLVEAAGLEFVPVGGDPDELLASPERNA---------GLL----LLGPGLLLGALRLLRRE 88 (401)
T ss_pred HHHHHCCCeEEEeeCHhHHHHHHHcCCceeeCCCCHHHHHhhhhhcc---------ccc----ccchHHHHHHHHHHHHH
Confidence 47999999999999963 2223467888888765321111111000 000 00001111122333444
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCC
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDM 158 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~ 158 (484)
+...+. .+.+.++ ..++|+||+|.+ ..++..+|+++|||+|.+++++..+. +..|...
T Consensus 89 ~~~~~~--~~~~~~~-~~~pDlvi~d~~-~~~~~~~A~~~giP~v~~~~~~~~~~-----------~~~~~~~------- 146 (401)
T cd03784 89 AEAMLD--DLVAAAR-DWGPDLVVADPL-AFAGAVAAEALGIPAVRLLLGPDTPT-----------SAFPPPL------- 146 (401)
T ss_pred HHHHHH--HHHHHhc-ccCCCEEEeCcH-HHHHHHHHHHhCCCeEEeecccCCcc-----------ccCCCcc-------
Confidence 444443 2444554 679999999986 46778899999999999988664321 1111111
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCC-CCCCCCCceEEEcccccC
Q psy11555 159 NFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFI-GSRPYPNNVIEVAGLHVK 237 (484)
Q Consensus 159 sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~-~~~p~~p~v~~vG~~~~~ 237 (484)
+ +..+............... .......++.+|.+..+. .....+..+....+.+. .+.+++++..++|+....
T Consensus 147 ~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 220 (401)
T cd03784 147 G---RANLRLYALLEAELWQDLL-GAWLRARRRRLGLPPLSL--LDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRD 220 (401)
T ss_pred c---hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCCcc--cccCCCcEEEecCcccCCCCCCccccCcEeCCCCCC
Confidence 1 1111111111111111111 122233444456432111 11222333444444443 445577788888643332
Q ss_pred C--CCCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC--CCCCCcEEEecccC
Q psy11555 238 S--PQPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--SGKIDKILLKSWAP 313 (484)
Q Consensus 238 ~--~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~--~~~~~nv~~~~~~p 313 (484)
. ....++++..|++.. +++|||++||... ..+.+..+.+++++...+.+++|..+.... ...++|+++.+|+|
T Consensus 221 ~~~~~~~~~~~~~~~~~~-~~~v~v~~Gs~~~--~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p 297 (401)
T cd03784 221 VPYNGPPPPELWLFLAAG-RPPVYVGFGSMVV--RDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVP 297 (401)
T ss_pred CCCCCCCCHHHHHHHhCC-CCcEEEeCCCCcc--cCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCC
Confidence 2 234567788888764 5899999999853 355678899999999888999999886432 24678999999999
Q ss_pred cccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 314 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 314 q~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
|.++| ++|++||||||+||++||+++|||+|++|...||+.||+++++.|+|+.++..+++.++|.+++++++++ .+
T Consensus 298 ~~~ll--~~~d~~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~-~~ 374 (401)
T cd03784 298 HDWLL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDP-PS 374 (401)
T ss_pred HHHHh--hhhheeeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH-HH
Confidence 99999 7799999999999999999999999999999999999999999999999988888999999999999975 46
Q ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHH
Q psy11555 394 KKRAEKVARLFQDRPMPPLDTAIYWIEH 421 (484)
Q Consensus 394 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~ 421 (484)
++++++..+.++. .++.+.+++.||.
T Consensus 375 ~~~~~~~~~~~~~--~~g~~~~~~~ie~ 400 (401)
T cd03784 375 RRRAAALLRRIRE--EDGVPSAADVIER 400 (401)
T ss_pred HHHHHHHHHHHHh--ccCHHHHHHHHhh
Confidence 6677777777765 6899999999985
No 17
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=8e-36 Score=302.02 Aligned_cols=313 Identities=19% Similarity=0.258 Sum_probs=216.9
Q ss_pred HHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh---hCCCCC-----------CCccCcc
Q psy11555 86 KAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER---FGIPDN-----------PSYIPNA 150 (484)
Q Consensus 86 ~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~---~g~p~~-----------~s~~P~~ 150 (484)
+.+.++|++ ..++++||+|.++ +|...+|+.+|||.+.+++++........ .+.|.. ...+|..
T Consensus 102 ~~~~~~l~~~~~~p~cvI~D~f~-~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~ 180 (477)
T PLN02863 102 APLLSWFRSHPSPPVAIISDMFL-GWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNC 180 (477)
T ss_pred HHHHHHHHhCCCCCeEEEEcCch-HhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccccccccccCCCCCC
Confidence 345566652 2467999999984 89999999999999999988875543221 111110 0012221
Q ss_pred c-cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-
Q psy11555 151 F-LSYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP- 223 (484)
Q Consensus 151 ~-~~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p- 223 (484)
. ....+-.++.... .........+.+.+. ..+..+.+++||...+|.. +.
T Consensus 181 ~~~~~~dlp~~~~~~---------------~~~~~~~~~~~~~~~--------~~~~~~~vlvNTf~eLE~~~~~~~~~~ 237 (477)
T PLN02863 181 PKYPWWQISSLYRSY---------------VEGDPAWEFIKDSFR--------ANIASWGLVVNSFTELEGIYLEHLKKE 237 (477)
T ss_pred CCcChHhCchhhhcc---------------CccchHHHHHHHHHh--------hhccCCEEEEecHHHHHHHHHHHHHhh
Confidence 0 0111111111000 000000011111110 1245567999999999865 22
Q ss_pred CC-CceEEEcccccCCC---------C--C-CccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcE
Q psy11555 224 YP-NNVIEVAGLHVKSP---------Q--P-LPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQR 289 (484)
Q Consensus 224 ~~-p~v~~vG~~~~~~~---------~--~-l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~ 289 (484)
+. +++..|||+..... . . -++++.+||+..+ +++|||||||... ++.+.+++++.+++..+.+
T Consensus 238 ~~~~~v~~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~---~~~~~~~ela~gL~~~~~~ 314 (477)
T PLN02863 238 LGHDRVWAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVV---LTKEQMEALASGLEKSGVH 314 (477)
T ss_pred cCCCCeEEeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceec---CCHHHHHHHHHHHHhCCCc
Confidence 22 57999999964221 0 0 1347899999975 7899999999964 7778899999999999999
Q ss_pred EEEEecCCC-----CCCCC---------CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchH
Q psy11555 290 VIWKWEGEN-----MSGKI---------DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQK 355 (484)
Q Consensus 290 ~i~~~~~~~-----~~~~~---------~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~ 355 (484)
|||+++... ...+| .++++.+|+||.++|.|+++++||||||+||++||+++|||+|++|+++||+
T Consensus 315 flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 394 (477)
T PLN02863 315 FIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQF 394 (477)
T ss_pred EEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccch
Confidence 999997421 11233 4578889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HcCcEEEecC---CCCCHHHHHHHHHHHh-CCHHHHHHHHHHHHHHhCC---CCChHHHHHHHHHHHHHc
Q psy11555 356 ANIRVVE-KAGFGVTLPY---DQITEETVLVALRTVL-GNPSYKKRAEKVARLFQDR---PMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 356 ~na~~~~-~~G~g~~l~~---~~~~~~~l~~ai~~~l-~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~ie~~~~~ 425 (484)
.||++++ +.|+|+.+.. ...+.+++.++|++++ ++++||+||++++++.++. --++.......|+.+.+.
T Consensus 395 ~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 395 VNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred hhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 9999976 5699999843 2358899999999988 6789999999999875431 123444555666666554
No 18
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.9e-35 Score=296.35 Aligned_cols=294 Identities=21% Similarity=0.333 Sum_probs=203.0
Q ss_pred HHHHHHhhc---C-CCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh--h-hCCCCCCCccCcccc-CCCCC
Q psy11555 86 KAALDLLHS---S-KKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE--R-FGIPDNPSYIPNAFL-SYDSD 157 (484)
Q Consensus 86 ~~l~~~l~~---~-~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~--~-~g~p~~~s~~P~~~~-~~~~~ 157 (484)
+.+.+++++ . .+.++||+|.++ +|...+|+.+|||.+.+++++....... . .+.+ .+..+|.... ...+-
T Consensus 91 ~~l~~~l~~l~~~~~pv~ciV~D~~~-~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~-~~~~iPglp~l~~~dl 168 (455)
T PLN02152 91 KALSDFIEANLNGDSPVTCLIYTILP-NWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNN-SVFEFPNLPSLEIRDL 168 (455)
T ss_pred HHHHHHHHHhhccCCCceEEEECCcc-HhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCC-CeeecCCCCCCchHHC
Confidence 345555541 1 345999999985 8999999999999999988887544322 1 1211 1112343210 11111
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhc-cccEEEEeccCCCCCC--CCCC-CceEEEcc
Q psy11555 158 MNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLAR-NTSLVLVNSHFTFIGS--RPYP-NNVIEVAG 233 (484)
Q Consensus 158 ~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~-~~~l~l~ns~~~l~~~--~p~~-p~v~~vG~ 233 (484)
++|... .+. . ....+.+.+.+ ....+ ..+-+++||...||.. .-+. ..+..|||
T Consensus 169 p~~~~~-~~~-----~---------~~~~~~~~~~~-------~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~v~~VGP 226 (455)
T PLN02152 169 PSFLSP-SNT-----N---------KAAQAVYQELM-------EFLKEESNPKILVNTFDSLEPEFLTAIPNIEMVAVGP 226 (455)
T ss_pred chhhcC-CCC-----c---------hhHHHHHHHHH-------HHhhhccCCEEEEeChHHhhHHHHHhhhcCCEEEEcc
Confidence 121110 000 0 00001111111 01111 1357899999998865 1111 25999999
Q ss_pred cccCC----C---C-----CCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC---
Q psy11555 234 LHVKS----P---Q-----PLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--- 297 (484)
Q Consensus 234 ~~~~~----~---~-----~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~--- 297 (484)
+.... . . .-+.++.+||+..+ +++|||||||.. .++.+.+++++.+|+..+++|||++.+.
T Consensus 227 L~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~---~l~~~q~~ela~gL~~s~~~flWv~r~~~~~ 303 (455)
T PLN02152 227 LLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMV---ELSKKQIEELARALIEGKRPFLWVITDKLNR 303 (455)
T ss_pred cCccccccccccCccccccccchHHHHHhhCCCCCceEEEEecccc---cCCHHHHHHHHHHHHHcCCCeEEEEecCccc
Confidence 96421 1 1 11246999999975 799999999996 4899999999999999999999998641
Q ss_pred ------C-------CCC----CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHH
Q psy11555 298 ------N-------MSG----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV 360 (484)
Q Consensus 298 ------~-------~~~----~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~ 360 (484)
. ..+ .++|..+.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||++
T Consensus 304 ~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~ 383 (455)
T PLN02152 304 EAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKL 383 (455)
T ss_pred ccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHH
Confidence 0 011 45778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHc-CcEEEe--cCC-CCCHHHHHHHHHHHhCCHH--HHHHHHHHHHHHhC
Q psy11555 361 VEKA-GFGVTL--PYD-QITEETVLVALRTVLGNPS--YKKRAEKVARLFQD 406 (484)
Q Consensus 361 ~~~~-G~g~~l--~~~-~~~~~~l~~ai~~~l~~~~--~~~~a~~~~~~~~~ 406 (484)
+++. |+|+.+ +.+ .++.++|.++|+++++|++ +|++|++++++.+.
T Consensus 384 ~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~ 435 (455)
T PLN02152 384 LEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIE 435 (455)
T ss_pred HHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 9983 555554 333 3589999999999997654 89999888776654
No 19
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.6e-35 Score=297.26 Aligned_cols=312 Identities=19% Similarity=0.262 Sum_probs=217.0
Q ss_pred HHHHHHhhc---CCC-ccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-h--hCC-CCC-------CCccCcc
Q psy11555 86 KAALDLLHS---SKK-YDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-R--FGI-PDN-------PSYIPNA 150 (484)
Q Consensus 86 ~~l~~~l~~---~~~-~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~--~g~-p~~-------~s~~P~~ 150 (484)
+.+.++|+. ..+ .++||+|.++ +|...+|+.+|||.+.+++++....... . .+. +.+ +-.+|..
T Consensus 101 ~~l~~~l~~~~~~~~pv~ciV~D~~~-~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl 179 (480)
T PLN02555 101 REIPNLVKRYAEQGRPVSCLINNPFI-PWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQLPCM 179 (480)
T ss_pred HHHHHHHHHHhccCCCceEEEECCcc-hHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCcccccCCCceeecCCC
Confidence 345555541 123 4999999995 8999999999999999888886544321 1 111 100 0112322
Q ss_pred c-cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCC
Q psy11555 151 F-LSYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPY 224 (484)
Q Consensus 151 ~-~~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~ 224 (484)
. ....+-++|..+ . ...+..++... ..+ +....++.+++||...||.. +..
T Consensus 180 p~l~~~dlp~~~~~-~-----------------~~~~~~~~~~~----~~~-~~~~~a~~vlvNTf~eLE~~~~~~l~~~ 236 (480)
T PLN02555 180 PLLKYDEIPSFLHP-S-----------------SPYPFLRRAIL----GQY-KNLDKPFCILIDTFQELEKEIIDYMSKL 236 (480)
T ss_pred CCcCHhhCcccccC-C-----------------CCchHHHHHHH----HHH-HhcccCCEEEEEchHHHhHHHHHHHhhC
Confidence 1 011111121110 0 00000001000 000 11234668999999999865 222
Q ss_pred CCceEEEcccccCC----C------CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEE
Q psy11555 225 PNNVIEVAGLHVKS----P------QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK 293 (484)
Q Consensus 225 ~p~v~~vG~~~~~~----~------~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 293 (484)
.| +..|||+.... . ...++++.+||+..+ +++|||||||.. .++.+.+.+++.+++..+++|||+
T Consensus 237 ~~-v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~---~~~~~q~~ela~~l~~~~~~flW~ 312 (480)
T PLN02555 237 CP-IKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVV---YLKQEQIDEIAYGVLNSGVSFLWV 312 (480)
T ss_pred CC-EEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEecccc---CCCHHHHHHHHHHHHhcCCeEEEE
Confidence 34 89999986421 1 123457899999986 689999999985 478899999999999999999999
Q ss_pred ecCC---------CCC-----CCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHH
Q psy11555 294 WEGE---------NMS-----GKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIR 359 (484)
Q Consensus 294 ~~~~---------~~~-----~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~ 359 (484)
+... .++ ..++|+.+.+|+||.+||+||++++||||||+||++||+++|||+|++|+++||+.||+
T Consensus 313 ~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~ 392 (480)
T PLN02555 313 MRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAV 392 (480)
T ss_pred EecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHH
Confidence 7621 111 13468899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHc-CcEEEec-----CCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHhCCC---CChHHHHHHHHHHHHHc
Q psy11555 360 VVEKA-GFGVTLP-----YDQITEETVLVALRTVLGN---PSYKKRAEKVARLFQDRP---MPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 360 ~~~~~-G~g~~l~-----~~~~~~~~l~~ai~~~l~~---~~~~~~a~~~~~~~~~~~---~~~~~~~~~~ie~~~~~ 425 (484)
++++. |+|+.+. ...++.+++.++|++++++ .++|+||++++++.+..- -++-......|+++.+.
T Consensus 393 ~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~ 470 (480)
T PLN02555 393 YLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRK 470 (480)
T ss_pred HHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 99887 9999993 3467999999999999965 469999999998765421 22344556667766554
No 20
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=6.3e-35 Score=292.17 Aligned_cols=290 Identities=19% Similarity=0.269 Sum_probs=198.8
Q ss_pred HHHHHHhhc---CCCc-cEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhh---CCCCCCCccCcccc-CCCCC
Q psy11555 86 KAALDLLHS---SKKY-DLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERF---GIPDNPSYIPNAFL-SYDSD 157 (484)
Q Consensus 86 ~~l~~~l~~---~~~~-DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~---g~p~~~s~~P~~~~-~~~~~ 157 (484)
+.+.++|+. ..+| |+||+|.++ +|...+|+.+|||.+.+++++......... .....+..+|.... ...+-
T Consensus 89 ~~~~~~l~~~~~~~~Pv~cvV~D~f~-~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~~~~~~~pg~p~l~~~dl 167 (449)
T PLN02173 89 KTVADIIRKHQSTDNPITCIVYDSFM-PWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLPLLELQDL 167 (449)
T ss_pred HHHHHHHHHhhccCCCceEEEECCcc-hhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccCCccCCCCCCCCCChhhC
Confidence 446666652 1245 999999985 899999999999999888876543322111 00000111222100 00011
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCCCCceEEEc
Q psy11555 158 MNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPYPNNVIEVA 232 (484)
Q Consensus 158 ~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~~p~v~~vG 232 (484)
+++.. .........+.+.+.+ +...+++-+++||...+|.. +.. +.+..||
T Consensus 168 p~~~~---------------~~~~~~~~~~~~~~~~--------~~~~~~~~vlvNTf~eLE~~~~~~~~~~-~~v~~VG 223 (449)
T PLN02173 168 PTFVT---------------PTGSHLAYFEMVLQQF--------TNFDKADFVLVNSFHDLDLHENELLSKV-CPVLTIG 223 (449)
T ss_pred Chhhc---------------CCCCchHHHHHHHHHH--------hhhccCCEEEEeCHHHhhHHHHHHHHhc-CCeeEEc
Confidence 11110 0000000000011111 11244678999999999865 222 3699999
Q ss_pred ccccC--------CCC---------CCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEe
Q psy11555 233 GLHVK--------SPQ---------PLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW 294 (484)
Q Consensus 233 ~~~~~--------~~~---------~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 294 (484)
|+... ..+ .-++++.+||+..+ +++|||||||.. .++.+.+++++.+++ +..|+|++
T Consensus 224 Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~---~~~~~~~~ela~gLs--~~~flWvv 298 (449)
T PLN02173 224 PTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMA---KLSSEQMEEIASAIS--NFSYLWVV 298 (449)
T ss_pred ccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccc---cCCHHHHHHHHHHhc--CCCEEEEE
Confidence 99631 111 11234889999876 679999999985 378899999999994 45699998
Q ss_pred cCC---CCCC-----C-CCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc-
Q psy11555 295 EGE---NMSG-----K-IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA- 364 (484)
Q Consensus 295 ~~~---~~~~-----~-~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~- 364 (484)
..+ .+++ . ++|+.+.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||+++++.
T Consensus 299 r~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~ 378 (449)
T PLN02173 299 RASEESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVW 378 (449)
T ss_pred eccchhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHh
Confidence 631 1221 1 57899999999999999999999999999999999999999999999999999999999976
Q ss_pred CcEEEecCC----CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHh
Q psy11555 365 GFGVTLPYD----QITEETVLVALRTVLGNP---SYKKRAEKVARLFQ 405 (484)
Q Consensus 365 G~g~~l~~~----~~~~~~l~~ai~~~l~~~---~~~~~a~~~~~~~~ 405 (484)
|+|+.+..+ .++.++|.++|++++.++ ++|++|++++++.+
T Consensus 379 g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~ 426 (449)
T PLN02173 379 KVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAV 426 (449)
T ss_pred CceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 888887532 258999999999999764 57888888887776
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=2.2e-35 Score=299.85 Aligned_cols=292 Identities=18% Similarity=0.304 Sum_probs=204.8
Q ss_pred HHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hhCC-------CCCC--------CccCc
Q psy11555 87 AALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RFGI-------PDNP--------SYIPN 149 (484)
Q Consensus 87 ~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~g~-------p~~~--------s~~P~ 149 (484)
.+.+++++ ..++|+||+|.++ .|+..+|+++|||.+.+++++....... ..+. |... ..+|.
T Consensus 97 ~~~~~l~~~~~~~~~VI~D~~~-~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg 175 (459)
T PLN02448 97 PFEQLLDRLEPPVTAIVADTYL-FWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPG 175 (459)
T ss_pred HHHHHHHhcCCCcEEEEECCcc-HHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccccccCCccccCCC
Confidence 35566652 1468999999884 8999999999999999998886333211 1110 1100 01221
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-
Q psy11555 150 AFLSYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP- 223 (484)
Q Consensus 150 ~~~~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p- 223 (484)
.. .+...+ +... ... ......+.+.+.+. -..+++-+++||...||.. +.
T Consensus 176 ~~-----~l~~~d-lp~~--------~~~--~~~~~~~~~~~~~~--------~~~~~~~vlvNTf~eLE~~~~~~l~~~ 231 (459)
T PLN02448 176 LS-----STRLSD-LPPI--------FHG--NSRRVLKRILEAFS--------WVPKAQYLLFTSFYELEAQAIDALKSK 231 (459)
T ss_pred CC-----CCChHH-Cchh--------hcC--CchHHHHHHHHHHh--------hcccCCEEEEccHHHhhHHHHHHHHhh
Confidence 10 000000 0000 000 00000011111111 1233567899999988865 22
Q ss_pred CCCceEEEcccccCC-----CCC-----CccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEE
Q psy11555 224 YPNNVIEVAGLHVKS-----PQP-----LPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIW 292 (484)
Q Consensus 224 ~~p~v~~vG~~~~~~-----~~~-----l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~ 292 (484)
.++++..|||+.... ... -+.++.+|++..+ +++|||||||... .+.+.+++++++++..+++|||
T Consensus 232 ~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~---~~~~~~~~~~~~l~~~~~~~lw 308 (459)
T PLN02448 232 FPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLS---VSSAQMDEIAAGLRDSGVRFLW 308 (459)
T ss_pred cCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeeccccc---CCHHHHHHHHHHHHhCCCCEEE
Confidence 345799999985321 000 1236889999875 7899999999954 6678899999999999999999
Q ss_pred EecCC--CCCC-CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHH-cCcEE
Q psy11555 293 KWEGE--NMSG-KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGV 368 (484)
Q Consensus 293 ~~~~~--~~~~-~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~ 368 (484)
++.++ .+.+ .++|+.+.+|+||.+||.|+++++||||||+||++||+++|||+|++|+++||+.||+++++ .|+|+
T Consensus 309 ~~~~~~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~ 388 (459)
T PLN02448 309 VARGEASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGW 388 (459)
T ss_pred EEcCchhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceE
Confidence 87643 2223 23689999999999999999999999999999999999999999999999999999999998 58888
Q ss_pred EecC-----CCCCHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHhC
Q psy11555 369 TLPY-----DQITEETVLVALRTVLGNP-----SYKKRAEKVARLFQD 406 (484)
Q Consensus 369 ~l~~-----~~~~~~~l~~ai~~~l~~~-----~~~~~a~~~~~~~~~ 406 (484)
.+.. ..++.++|.++++++|+++ ++|++|++++++.+.
T Consensus 389 ~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~ 436 (459)
T PLN02448 389 RVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRG 436 (459)
T ss_pred EEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Confidence 8742 2479999999999999764 699999999987765
No 22
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=2e-35 Score=296.64 Aligned_cols=303 Identities=17% Similarity=0.205 Sum_probs=213.2
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCC---CCCCCccCccccCCC--C--CCC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGI---PDNPSYIPNAFLSYD--S--DMN 159 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~---p~~~s~~P~~~~~~~--~--~~s 159 (484)
.+.++++ ..++|+||+|. .+|...+|+.+|||.+.+++++........... ..++..+|....... + ..+
T Consensus 98 ~l~~~L~-~~~p~cVV~D~--~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~ 174 (446)
T PLN00414 98 QIEAKVR-ALKPDLIFFDF--VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPDYPLSKVALRGHDANVCS 174 (446)
T ss_pred HHHHHHh-cCCCeEEEECC--chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCCCCCCCCCcCcCchhhcccch
Confidence 4666675 56889999994 479999999999999999888765443221100 000101111000000 0 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC-CCCceEEEcc
Q psy11555 160 FVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP-YPNNVIEVAG 233 (484)
Q Consensus 160 f~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p-~~p~v~~vG~ 233 (484)
+.++ ....+.+.+ +..++++-+++||...+|.. +. ..+.+..|||
T Consensus 175 ~~~~---------------------~~~~~~~~~--------~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGP 225 (446)
T PLN00414 175 LFAN---------------------SHELFGLIT--------KGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGP 225 (446)
T ss_pred hhcc---------------------cHHHHHHHH--------HhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcc
Confidence 1100 001111111 12334678999999998865 22 2356999999
Q ss_pred cccCCC----CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----C-CCCCC
Q psy11555 234 LHVKSP----QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----N-MSGKI 303 (484)
Q Consensus 234 ~~~~~~----~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~-~~~~~ 303 (484)
+..... ....+++.+|||..+ +++|||||||... .+.+.+.++..+++..+..|+|++... . ...+|
T Consensus 226 l~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~---~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp 302 (446)
T PLN00414 226 MLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFF---FEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALP 302 (446)
T ss_pred cCCCcccccCcccHHHHHHHHhcCCCCceEEEeeccccc---CCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCC
Confidence 964321 111246889999976 8999999999954 778889999999999999999998641 1 11233
Q ss_pred C---------cEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHH-HcCcEEEecCC
Q psy11555 304 D---------KILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYD 373 (484)
Q Consensus 304 ~---------nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~-~~G~g~~l~~~ 373 (484)
+ +..+.+|+||.+||.|+++++||||||+||++||+++|||+|++|+++||+.||++++ +.|+|+.+..+
T Consensus 303 ~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~ 382 (446)
T PLN00414 303 EGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE 382 (446)
T ss_pred hhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc
Confidence 3 3455699999999999999999999999999999999999999999999999999996 68999999643
Q ss_pred ---CCCHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHhCCCCCh-HHHHHHHHHHHHHcC
Q psy11555 374 ---QITEETVLVALRTVLGNP-----SYKKRAEKVARLFQDRPMPP-LDTAIYWIEHVIRHG 426 (484)
Q Consensus 374 ---~~~~~~l~~ai~~~l~~~-----~~~~~a~~~~~~~~~~~~~~-~~~~~~~ie~~~~~~ 426 (484)
.++.+++.++++++|.++ ++|++++++++.+.+. .+ .......|+.+.+..
T Consensus 383 ~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~--gg~ss~l~~~v~~~~~~~ 442 (446)
T PLN00414 383 DSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSP--GLLSGYADKFVEALENEV 442 (446)
T ss_pred cCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHhc
Confidence 389999999999999764 3999999999998663 33 333566677665543
No 23
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=5.2e-34 Score=289.79 Aligned_cols=312 Identities=16% Similarity=0.237 Sum_probs=211.9
Q ss_pred CHHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh-h----CC-CCC-C-----CccCccc
Q psy11555 85 TKAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER-F----GI-PDN-P-----SYIPNAF 151 (484)
Q Consensus 85 ~~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~-~----g~-p~~-~-----s~~P~~~ 151 (484)
.+.+.++|++ ..++++||+|.++ +|...+|+.+|||.+.+++++........ . +. +.+ + -.+|...
T Consensus 97 ~~~l~~~L~~l~~pv~cIV~D~f~-~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPGlp 175 (480)
T PLN00164 97 APHVRAAIAGLSCPVAALVVDFFC-TPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDVPGLP 175 (480)
T ss_pred hHHHHHHHHhcCCCceEEEECCcc-hhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccccCcceecCCCC
Confidence 3346666652 1256999999985 89999999999999999998875543221 1 00 000 0 0122221
Q ss_pred -cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCC-
Q psy11555 152 -LSYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPY- 224 (484)
Q Consensus 152 -~~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~- 224 (484)
....+-+++...-.+ ... ..+.+.. +...+++-+++||...+|.. +..
T Consensus 176 ~l~~~dlp~~~~~~~~----------------~~~-~~~~~~~--------~~~~~~~~vlvNTf~eLE~~~~~~~~~~~ 230 (480)
T PLN00164 176 PVPASSLPAPVMDKKS----------------PNY-AWFVYHG--------RRFMEAAGIIVNTAAELEPGVLAAIADGR 230 (480)
T ss_pred CCChHHCCchhcCCCc----------------HHH-HHHHHHH--------HhhhhcCEEEEechHHhhHHHHHHHHhcc
Confidence 011111111100000 000 0000000 11234667899999888864 111
Q ss_pred ------CCceEEEcccccCC--C--CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEE
Q psy11555 225 ------PNNVIEVAGLHVKS--P--QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK 293 (484)
Q Consensus 225 ------~p~v~~vG~~~~~~--~--~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~ 293 (484)
.|++..|||+.... . .+.++++.+||+..+ +++|||||||.. .++.+.+++++.+++..+++|||+
T Consensus 231 ~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~---~~~~~q~~ela~gL~~s~~~flWv 307 (480)
T PLN00164 231 CTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMG---FFDAPQVREIAAGLERSGHRFLWV 307 (480)
T ss_pred ccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccc---cCCHHHHHHHHHHHHHcCCCEEEE
Confidence 25799999997421 1 123457999999985 789999999984 477888999999999999999999
Q ss_pred ecCCCC-----------C-CCCCc---------EEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCC
Q psy11555 294 WEGENM-----------S-GKIDK---------ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG 352 (484)
Q Consensus 294 ~~~~~~-----------~-~~~~n---------v~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~ 352 (484)
+..... . .+|+| +.+.+|+||.+||.|+.+.+||||||+||++||+++|||+|++|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~ 387 (480)
T PLN00164 308 LRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYA 387 (480)
T ss_pred EcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccc
Confidence 874210 0 13444 67779999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHH-HcCcEEEecCC-----CCCHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHhCCC---CChHHHHHHH
Q psy11555 353 DQKANIRVVE-KAGFGVTLPYD-----QITEETVLVALRTVLGNP-----SYKKRAEKVARLFQDRP---MPPLDTAIYW 418 (484)
Q Consensus 353 dQ~~na~~~~-~~G~g~~l~~~-----~~~~~~l~~ai~~~l~~~-----~~~~~a~~~~~~~~~~~---~~~~~~~~~~ 418 (484)
||+.||+++. ..|+|+.+..+ .++.++|.++|+++|.++ .+|++|++++++.++.- -++-...-..
T Consensus 388 DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~ 467 (480)
T PLN00164 388 EQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRL 467 (480)
T ss_pred cchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 9999998875 57999998532 368999999999999764 37888888887776521 1233344455
Q ss_pred HHHHHHc
Q psy11555 419 IEHVIRH 425 (484)
Q Consensus 419 ie~~~~~ 425 (484)
|+.+.+.
T Consensus 468 v~~~~~~ 474 (480)
T PLN00164 468 AREIRHG 474 (480)
T ss_pred HHHHHhc
Confidence 5555443
No 24
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=1.7e-33 Score=281.72 Aligned_cols=292 Identities=22% Similarity=0.317 Sum_probs=205.6
Q ss_pred CHHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCC-EEEEeCCCCchhhHh-hh---CCC--C------CCCccCcc
Q psy11555 85 TKAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVP-YIAVSAAHIIPTAAE-RF---GIP--D------NPSYIPNA 150 (484)
Q Consensus 85 ~~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP-~i~~~~~~~~~~~~~-~~---g~p--~------~~s~~P~~ 150 (484)
.+.+.++|++ ..++++||+|.++ +|...+|+.+||| .+.+.+++....... .+ ..+ . .+-.+|..
T Consensus 94 ~~~~~~~l~~l~~~~~ciV~D~f~-~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~vPg~ 172 (470)
T PLN03015 94 KPAVRDAVKSMKRKPTVMIVDFFG-TALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGC 172 (470)
T ss_pred hHHHHHHHHhcCCCCeEEEEcCCc-HHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccCCCCCeeeCCCC
Confidence 3457777762 2368999999995 8999999999999 466666554333111 11 101 0 01113322
Q ss_pred c-cCCCCCCCHH-HHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC
Q psy11555 151 F-LSYDSDMNFV-QRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP 223 (484)
Q Consensus 151 ~-~~~~~~~sf~-~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p 223 (484)
. ....+-++++ ++ + ........ +. .. -..+++-+++||...||.. +.
T Consensus 173 p~l~~~dlp~~~~~~--~---------------~~~~~~~~-~~-------~~-~~~~a~gvlvNTf~eLE~~~~~~l~~ 226 (470)
T PLN03015 173 KPVGPKELMETMLDR--S---------------DQQYKECV-RS-------GL-EVPMSDGVLVNTWEELQGNTLAALRE 226 (470)
T ss_pred CCCChHHCCHhhcCC--C---------------cHHHHHHH-HH-------HH-hcccCCEEEEechHHHhHHHHHHHHh
Confidence 1 1111111111 00 0 00000111 11 11 1345778999999999864 22
Q ss_pred C-------CCceEEEcccccCCC-CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEe
Q psy11555 224 Y-------PNNVIEVAGLHVKSP-QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW 294 (484)
Q Consensus 224 ~-------~p~v~~vG~~~~~~~-~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 294 (484)
. .+.+..|||+..... ...++++.+||+..+ +++|||||||.. .++.+.+++++.+|+..+++|||++
T Consensus 227 ~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~---~~~~~q~~ela~gl~~s~~~FlWv~ 303 (470)
T PLN03015 227 DMELNRVMKVPVYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGG---TLTFEQTVELAWGLELSGQRFVWVL 303 (470)
T ss_pred hcccccccCCceEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCC---cCCHHHHHHHHHHHHhCCCcEEEEE
Confidence 1 245999999974321 122347999999975 799999999994 4899999999999999999999998
Q ss_pred cCC------------CCC-CCCCc---------EEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCC
Q psy11555 295 EGE------------NMS-GKIDK---------ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG 352 (484)
Q Consensus 295 ~~~------------~~~-~~~~n---------v~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~ 352 (484)
... ... .+|+| +.+.+|+||.++|+|+++++||||||+||++||+++|||||++|+++
T Consensus 304 r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~ 383 (470)
T PLN03015 304 RRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYA 383 (470)
T ss_pred ecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEeccccc
Confidence 521 111 25555 67789999999999999999999999999999999999999999999
Q ss_pred chHHHHHHH-HHcCcEEEec----CCCCCHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHhC
Q psy11555 353 DQKANIRVV-EKAGFGVTLP----YDQITEETVLVALRTVLG-----NPSYKKRAEKVARLFQD 406 (484)
Q Consensus 353 dQ~~na~~~-~~~G~g~~l~----~~~~~~~~l~~ai~~~l~-----~~~~~~~a~~~~~~~~~ 406 (484)
||+.||+++ +..|+|+.+. .+.++.+++.++|++++. ..++|+||++++++.+.
T Consensus 384 DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~ 447 (470)
T PLN03015 384 EQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSER 447 (470)
T ss_pred chHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHH
Confidence 999999998 6789999985 235799999999999994 24689999999887654
No 25
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=4.8e-33 Score=281.22 Aligned_cols=313 Identities=20% Similarity=0.280 Sum_probs=212.5
Q ss_pred HHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh---hhCCC---CC----CCccCccccCC
Q psy11555 86 KAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE---RFGIP---DN----PSYIPNAFLSY 154 (484)
Q Consensus 86 ~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~---~~g~p---~~----~s~~P~~~~~~ 154 (484)
+.+.++|++ ..++|+||+|.++ +|...+|+.+|||.+.+++++....... ..-.+ .+ +-.+|.+....
T Consensus 107 ~~l~~lL~~~~~pp~cIV~D~f~-~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~p~~~ 185 (491)
T PLN02534 107 QPLERFLEQAKPPPSCIISDKCL-SWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFVVPGMPQSI 185 (491)
T ss_pred HHHHHHHHhcCCCCcEEEECCcc-HHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccCCCCCceeecCCCCccc
Confidence 347777762 2468999999995 8999999999999999987776444221 11000 00 01122211000
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----C-CCCCce
Q psy11555 155 DSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----R-PYPNNV 228 (484)
Q Consensus 155 ~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~-p~~p~v 228 (484)
.+ |.... .. .+.. .+....+.+ . +.+..+.++.+++||...||.. + ...+++
T Consensus 186 --~l----~~~dl-p~----~~~~---~~~~~~~~~-~-------~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v 243 (491)
T PLN02534 186 --EI----TRAQL-PG----AFVS---LPDLDDVRN-K-------MREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKV 243 (491)
T ss_pred --cc----cHHHC-Ch----hhcC---cccHHHHHH-H-------HHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcE
Confidence 00 00000 00 0000 000111111 1 1122334568999999999964 2 234679
Q ss_pred EEEcccccCCC----------C-CC-ccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEec
Q psy11555 229 IEVAGLHVKSP----------Q-PL-PNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWE 295 (484)
Q Consensus 229 ~~vG~~~~~~~----------~-~l-~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 295 (484)
..|||+..... . .. .+++.+||+..+ +++|||||||... ...+.+.+++.+++..+++|||++.
T Consensus 244 ~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~---~~~~q~~e~a~gl~~~~~~flW~~r 320 (491)
T PLN02534 244 WCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCR---LVPSQLIELGLGLEASKKPFIWVIK 320 (491)
T ss_pred EEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEeccccc---CCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 99999964210 0 11 235889999986 7999999999963 7788889999999999999999998
Q ss_pred CC---------CCC-----C-CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHH
Q psy11555 296 GE---------NMS-----G-KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV 360 (484)
Q Consensus 296 ~~---------~~~-----~-~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~ 360 (484)
.+ .++ . .+.++++.+|+||.++|.|+++++||||||+||++||+++|||+|++|+++||+.||++
T Consensus 321 ~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~ 400 (491)
T PLN02534 321 TGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKL 400 (491)
T ss_pred cCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHH
Confidence 31 011 1 25678888999999999999999999999999999999999999999999999999999
Q ss_pred HH-HcCcEEEecC------------C-CCCHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHhCCC---CChHHHHHHH
Q psy11555 361 VE-KAGFGVTLPY------------D-QITEETVLVALRTVLG-----NPSYKKRAEKVARLFQDRP---MPPLDTAIYW 418 (484)
Q Consensus 361 ~~-~~G~g~~l~~------------~-~~~~~~l~~ai~~~l~-----~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~ 418 (484)
++ ..|+|+.+.. . .++.+++.++|++++. ..++|+||++++++.+..- -++-...-..
T Consensus 401 ~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~f 480 (491)
T PLN02534 401 IVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSIL 480 (491)
T ss_pred HHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 87 4688887631 1 2789999999999995 2579999999988776521 1233344455
Q ss_pred HHHHHH
Q psy11555 419 IEHVIR 424 (484)
Q Consensus 419 ie~~~~ 424 (484)
|+.+.+
T Consensus 481 v~~i~~ 486 (491)
T PLN02534 481 IQDVLK 486 (491)
T ss_pred HHHHHH
Confidence 555543
No 26
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.6e-34 Score=291.59 Aligned_cols=279 Identities=20% Similarity=0.289 Sum_probs=201.0
Q ss_pred CccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh-h----CC-C-C-------CCCccCccc--cCCCCCCCH
Q psy11555 97 KYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER-F----GI-P-D-------NPSYIPNAF--LSYDSDMNF 160 (484)
Q Consensus 97 ~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~-~----g~-p-~-------~~s~~P~~~--~~~~~~~sf 160 (484)
++++||+|.++ +|...+|+.+|||.+.+.+++........ . +. + . .+-.+|... ....+-+++
T Consensus 118 pv~cvV~D~f~-~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPgl~~~l~~~dlp~~ 196 (475)
T PLN02167 118 RVAGLVLDFFC-VPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPGFVNSVPTKVLPPG 196 (475)
T ss_pred CeEEEEECCcc-HHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccccccccCCCCCeeECCCCCCCCChhhCchh
Confidence 45999999995 89999999999999999998864432211 1 10 0 0 001122210 011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CC---CCCceEEEc
Q psy11555 161 VQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RP---YPNNVIEVA 232 (484)
Q Consensus 161 ~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p---~~p~v~~vG 232 (484)
.. + +.....+.+.+ +..++++-+++||...+|.. +. ..|+++.||
T Consensus 197 ~~---~----------------~~~~~~~~~~~--------~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vG 249 (475)
T PLN02167 197 LF---M----------------KESYEAWVEIA--------ERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVG 249 (475)
T ss_pred hh---C----------------cchHHHHHHHH--------HhhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEec
Confidence 00 0 00000011111 11344678999999998864 11 136899999
Q ss_pred ccccCCC---CCCc----cchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC------
Q psy11555 233 GLHVKSP---QPLP----NDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------ 298 (484)
Q Consensus 233 ~~~~~~~---~~l~----~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~------ 298 (484)
|++.... ..++ +++.+||+..+ +++|||||||.. .++.+.+++++.+++..+++|||+++...
T Consensus 250 pl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~---~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~ 326 (475)
T PLN02167 250 PILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLG---SLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASP 326 (475)
T ss_pred cccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccc---cCCHHHHHHHHHHHHhCCCcEEEEEecCcccccch
Confidence 9986322 2222 57999999876 789999999984 37788899999999999999999987421
Q ss_pred CCCCCCc--------EEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHH-HHHcCcEEE
Q psy11555 299 MSGKIDK--------ILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV-VEKAGFGVT 369 (484)
Q Consensus 299 ~~~~~~n--------v~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~-~~~~G~g~~ 369 (484)
...+|+| .++.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.||++ ++..|+|+.
T Consensus 327 ~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~ 406 (475)
T PLN02167 327 YEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVE 406 (475)
T ss_pred hhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEE
Confidence 1124443 3688999999999999999999999999999999999999999999999999976 778999998
Q ss_pred ecC-------CCCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHhC
Q psy11555 370 LPY-------DQITEETVLVALRTVLGNP-SYKKRAEKVARLFQD 406 (484)
Q Consensus 370 l~~-------~~~~~~~l~~ai~~~l~~~-~~~~~a~~~~~~~~~ 406 (484)
+.. ..++.++|.++|+++|.++ .||++|+++++..+.
T Consensus 407 ~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~ 451 (475)
T PLN02167 407 LRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARK 451 (475)
T ss_pred eecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 853 2469999999999999754 799999999987754
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=280.64 Aligned_cols=215 Identities=27% Similarity=0.406 Sum_probs=178.3
Q ss_pred HHHhhccccEEEEeccCCCCCC-CCCCCceEEEcccccCCCCCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHH
Q psy11555 200 LDQLARNTSLVLVNSHFTFIGS-RPYPNNVIEVAGLHVKSPQPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKA 278 (484)
Q Consensus 200 ~~~l~~~~~l~l~ns~~~l~~~-~p~~p~v~~vG~~~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 278 (484)
+..+........+...+....| +..+....++|+++......++.+ ...++++||+|+||... . .++++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~~d~~~vyvslGt~~~---~-~~l~~~ 256 (406)
T COG1819 186 IRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAANELPYW-----IPADRPIVYVSLGTVGN---A-VELLAI 256 (406)
T ss_pred hHHHhcCCCCccccccccccCCCCCCCCCcCccccccccccccCcch-----hcCCCCeEEEEcCCccc---H-HHHHHH
Confidence 4444444433333333333333 556667778887776554333332 22346999999999954 2 789999
Q ss_pred HHHHHhcCCcEEEEEecCCC--CCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHH
Q psy11555 279 FLRAFEQIPQRVIWKWEGEN--MSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKA 356 (484)
Q Consensus 279 ~~~a~~~~~~~~i~~~~~~~--~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~ 356 (484)
+++++..++.++|...++.. ..++|+|+.+..|+||.+++ +++++||||||+||++||+++|||+|++|...||+.
T Consensus 257 ~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p~~~~l--~~ad~vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~ 334 (406)
T COG1819 257 VLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELL--PRADAVIHHGGAGTTSEALYAGVPLVVIPDGADQPL 334 (406)
T ss_pred HHHHHhcCCcEEEEeccccccccccCCCceEEecCCCHHHHh--hhcCEEEecCCcchHHHHHHcCCCEEEecCCcchhH
Confidence 99999999999999887622 45689999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCC
Q psy11555 357 NIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGG 427 (484)
Q Consensus 357 na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~ 427 (484)
||.++++.|+|+.+..+.++.+.|.++|+++|+|++|+++++++++.++. ..+.+.++++||.+.+.++
T Consensus 335 nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~--~~g~~~~a~~le~~~~~~~ 403 (406)
T COG1819 335 NAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEFKE--EDGPAKAADLLEEFAREKK 403 (406)
T ss_pred HHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhh--cccHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999988 5778999999999888753
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.84 E-value=6.5e-20 Score=179.42 Aligned_cols=122 Identities=23% Similarity=0.380 Sum_probs=102.0
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcCC-cEEEEEecCCCCCCCCCcEEEeccc-C-cccccccCceeEEEecC
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGENMSGKIDKILLKSWA-P-QRDILDHPNVKVFISHG 330 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~~~~~nv~~~~~~-p-q~~ll~h~~~~~~Ithg 330 (484)
+++.|+|++|+... . .++++++.++ .++++. +.......++|+.+.++. + -.+++ .+++++||||
T Consensus 191 ~~~~iLv~~gg~~~-----~----~~~~~l~~~~~~~~~v~-g~~~~~~~~~ni~~~~~~~~~~~~~m--~~ad~vIs~~ 258 (318)
T PF13528_consen 191 DEPKILVYFGGGGP-----G----DLIEALKALPDYQFIVF-GPNAADPRPGNIHVRPFSTPDFAELM--AAADLVISKG 258 (318)
T ss_pred CCCEEEEEeCCCcH-----H----HHHHHHHhCCCCeEEEE-cCCcccccCCCEEEeecChHHHHHHH--HhCCEEEECC
Confidence 35789999999842 1 6677787787 466665 443333458899999986 3 45677 7899999999
Q ss_pred CcchHHHHHhcCCceeeccC--CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHH
Q psy11555 331 GFLGTTEALYSGVPIIGIPM--FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 387 (484)
Q Consensus 331 G~~s~~Eal~~gvP~i~~P~--~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~ 387 (484)
|+||++|++++|+|+|++|. +.||..||+++++.|+|+.++.++++++.|.++|+++
T Consensus 259 G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 259 GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence 99999999999999999999 7899999999999999999998999999999999864
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.83 E-value=6.5e-18 Score=166.40 Aligned_cols=155 Identities=21% Similarity=0.264 Sum_probs=114.5
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcC--CcEEEEEecCCCCCC---CCCcEEEeccc-Ccc-cccccCceeEE
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI--PQRVIWKWEGENMSG---KIDKILLKSWA-PQR-DILDHPNVKVF 326 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~---~~~nv~~~~~~-pq~-~ll~h~~~~~~ 326 (484)
++++|+|..||... ...-+.+.+++..+ +.+++|.+|...... ..+++.+.+|+ ++. +++ ..++++
T Consensus 184 ~~~~iLv~GGS~Ga-----~~in~~~~~~l~~l~~~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~--~~adlv 256 (352)
T PRK12446 184 KKPVITIMGGSLGA-----KKINETVREALPELLLKYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDIL--AITDFV 256 (352)
T ss_pred CCcEEEEECCccch-----HHHHHHHHHHHHhhccCcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHH--HhCCEE
Confidence 36789999999843 22223333334333 368999988643222 11355666776 443 566 789999
Q ss_pred EecCCcchHHHHHhcCCceeeccCC-----CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH-HHHHHHHH
Q psy11555 327 ISHGGFLGTTEALYSGVPIIGIPMF-----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS-YKKRAEKV 400 (484)
Q Consensus 327 IthgG~~s~~Eal~~gvP~i~~P~~-----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~-~~~~a~~~ 400 (484)
|||||.+|+.|++++|+|+|++|+. +||..||+.+++.|+|..+..++++++.|.+++.++++|++ +++++++
T Consensus 257 Isr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~- 335 (352)
T PRK12446 257 ISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALKK- 335 (352)
T ss_pred EECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHHH-
Confidence 9999999999999999999999984 58999999999999999998889999999999999998864 5444433
Q ss_pred HHHHhCCCCChHHHHHHHHHH
Q psy11555 401 ARLFQDRPMPPLDTAIYWIEH 421 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~ie~ 421 (484)
+.. .++.++.+++|+.
T Consensus 336 ---~~~--~~aa~~i~~~i~~ 351 (352)
T PRK12446 336 ---YNG--KEAIQTIIDHISE 351 (352)
T ss_pred ---cCC--CCHHHHHHHHHHh
Confidence 333 3677777777653
No 30
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.77 E-value=1.8e-16 Score=157.65 Aligned_cols=144 Identities=20% Similarity=0.273 Sum_probs=115.2
Q ss_pred HHHHHHHhcCCc--EEEEEecCCCCC------CCCCcEEEecccCc-ccccccCceeEEEecCCcchHHHHHhcCCceee
Q psy11555 277 KAFLRAFEQIPQ--RVIWKWEGENMS------GKIDKILLKSWAPQ-RDILDHPNVKVFISHGGFLGTTEALYSGVPIIG 347 (484)
Q Consensus 277 ~~~~~a~~~~~~--~~i~~~~~~~~~------~~~~nv~~~~~~pq-~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~ 347 (484)
..+.+++.++.. .+++.+|..... ...-++.+.+|+.+ .+++ +.++++|+|+|.++++||+++|+|+|+
T Consensus 200 ~~l~~a~~~~~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~~d~~i~~~g~~~~~Ea~~~g~Pvv~ 277 (357)
T PRK00726 200 EAVPEALALLPEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAY--AAADLVICRAGASTVAELAAAGLPAIL 277 (357)
T ss_pred HHHHHHHHHhhhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHH--HhCCEEEECCCHHHHHHHHHhCCCEEE
Confidence 333466655543 456666653211 12224888899844 4677 889999999999999999999999999
Q ss_pred ccC----CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 348 IPM----FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 348 ~P~----~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
+|. .++|..|+..+.+.|.|..++.++++++.|.++|+++++|+++++++++.++...+ ..+.++++..++.++
T Consensus 278 ~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 278 VPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGK--PDAAERLADLIEELA 355 (357)
T ss_pred ecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCC--cCHHHHHHHHHHHHh
Confidence 997 46899999999999999999888888999999999999999999999999888765 477888888887776
Q ss_pred H
Q psy11555 424 R 424 (484)
Q Consensus 424 ~ 424 (484)
|
T Consensus 356 ~ 356 (357)
T PRK00726 356 R 356 (357)
T ss_pred h
Confidence 5
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=3.6e-16 Score=152.34 Aligned_cols=162 Identities=20% Similarity=0.208 Sum_probs=126.1
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcCC--cEEEEEecCCCCCC----C-CCc-EEEecccCcccccccCceeE
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENMSG----K-IDK-ILLKSWAPQRDILDHPNVKV 325 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~~~----~-~~n-v~~~~~~pq~~ll~h~~~~~ 325 (484)
++++|+|.-||... ..+-+.+.+++..+. ..+++.+|...... . ..+ +.+.+|+.++..+- ..+|+
T Consensus 182 ~~~~ilV~GGS~Ga-----~~ln~~v~~~~~~l~~~~~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~-~~ADL 255 (357)
T COG0707 182 DKKTILVTGGSQGA-----KALNDLVPEALAKLANRIQVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALL-AAADL 255 (357)
T ss_pred CCcEEEEECCcchh-----HHHHHHHHHHHHHhhhCeEEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHH-HhccE
Confidence 46889998888843 344444555555555 57888888753221 1 112 88889998865332 78999
Q ss_pred EEecCCcchHHHHHhcCCceeeccCC----CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy11555 326 FISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 326 ~IthgG~~s~~Eal~~gvP~i~~P~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~ 401 (484)
+||++|.+|+.|++++|+|+|.+|.. +||..||+.+++.|.|.+++..++|.+++.+.|.+++++++-.++|++.+
T Consensus 256 vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a 335 (357)
T COG0707 256 VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENA 335 (357)
T ss_pred EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999999999973 48999999999999999999999999999999999999977777777777
Q ss_pred HHHhCCCCChHHHHHHHHHHHH
Q psy11555 402 RLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 402 ~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
+.+.. .+..++.++.++...
T Consensus 336 ~~~~~--p~aa~~i~~~~~~~~ 355 (357)
T COG0707 336 KKLGK--PDAAERIADLLLALA 355 (357)
T ss_pred HhcCC--CCHHHHHHHHHHHHh
Confidence 76655 367777777776554
No 32
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.73 E-value=1.5e-16 Score=155.56 Aligned_cols=126 Identities=25% Similarity=0.420 Sum_probs=96.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCc-EEEEEecCCC-CCCCCCcEEEecccCccccccc-CceeEEEecCC
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN-MSGKIDKILLKSWAPQRDILDH-PNVKVFISHGG 331 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~-~~i~~~~~~~-~~~~~~nv~~~~~~pq~~ll~h-~~~~~~IthgG 331 (484)
++.|++++|+.. .+.+++++.+.+. .+++ ++.+. ....++|+.+.+|.| .++..+ ++|+++|||||
T Consensus 188 ~~~iLv~~g~~~---------~~~l~~~l~~~~~~~~i~-~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~ad~vI~~~G 256 (321)
T TIGR00661 188 EDYILVYIGFEY---------RYKILELLGKIANVKFVC-YSYEVAKNSYNENVEIRRITT-DNFKELIKNAELVITHGG 256 (321)
T ss_pred CCcEEEECCcCC---------HHHHHHHHHhCCCeEEEE-eCCCCCccccCCCEEEEECCh-HHHHHHHHhCCEEEECCC
Confidence 467888888762 2455677777765 4443 22222 234578999999998 333333 89999999999
Q ss_pred cchHHHHHhcCCceeeccCCC--chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHH
Q psy11555 332 FLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 394 (484)
Q Consensus 332 ~~s~~Eal~~gvP~i~~P~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 394 (484)
.+|++||+++|+|++++|..+ ||..||+.+++.|+|+.++.+++ ++.+++.++++|+.|.
T Consensus 257 ~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~---~~~~~~~~~~~~~~~~ 318 (321)
T TIGR00661 257 FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL---RLLEAILDIRNMKRYK 318 (321)
T ss_pred hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH---HHHHHHHhcccccccc
Confidence 999999999999999999865 89999999999999999987655 6777787888887764
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.70 E-value=7.4e-15 Score=145.64 Aligned_cols=154 Identities=21% Similarity=0.221 Sum_probs=110.9
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCCC-------CCCCCcEEEecccCc-ccccccCce
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGENM-------SGKIDKILLKSWAPQ-RDILDHPNV 323 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~-------~~~~~nv~~~~~~pq-~~ll~h~~~ 323 (484)
+.+|++..|+.. .....+.+.+++..+ +..+++.+|.... .+..+|+++.+|+.+ .+++ ..+
T Consensus 181 ~~~i~~~~g~~~-----~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l--~~a 253 (350)
T cd03785 181 KPTLLVFGGSQG-----ARAINEAVPEALAELLRKRLQVIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAY--AAA 253 (350)
T ss_pred CeEEEEECCcHh-----HHHHHHHHHHHHHHhhccCeEEEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHH--Hhc
Confidence 345555555542 122223333444444 2355666665321 112468999999833 4566 789
Q ss_pred eEEEecCCcchHHHHHhcCCceeeccC----CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGIPM----FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~P~----~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
+++|+++|.+++.||+++|+|+|++|. .++|..|+..+.+.|.|..++..+.+.+++.++|+++++|++.++++.+
T Consensus 254 d~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 333 (350)
T cd03785 254 DLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAE 333 (350)
T ss_pred CEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999998999999999999999986 4689999999999999999987667899999999999999988888887
Q ss_pred HHHHHhCCCCChHHHHHH
Q psy11555 400 VARLFQDRPMPPLDTAIY 417 (484)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~ 417 (484)
.++...+ ..+.+++++
T Consensus 334 ~~~~~~~--~~~~~~i~~ 349 (350)
T cd03785 334 AARSLAR--PDAAERIAD 349 (350)
T ss_pred HHHhcCC--CCHHHHHHh
Confidence 7766644 355665543
No 34
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.60 E-value=1.5e-13 Score=136.07 Aligned_cols=99 Identities=24% Similarity=0.287 Sum_probs=84.1
Q ss_pred ccccccCceeEEEecCCcchHHHHHhcCCceeeccCC---CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 315 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 315 ~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.+++ +.++++|+++|.+++.||+++|+|+|++|.. ++|..|+..+++.|.|..++.++.+.++|.++|+++++|+
T Consensus 245 ~~~l--~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~ 322 (348)
T TIGR01133 245 AAAY--AAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP 322 (348)
T ss_pred HHHH--HhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH
Confidence 4566 7899999999988999999999999999863 5788899999999999999887778999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCChHHHHHH
Q psy11555 392 SYKKRAEKVARLFQDRPMPPLDTAIY 417 (484)
Q Consensus 392 ~~~~~a~~~~~~~~~~~~~~~~~~~~ 417 (484)
+.++++.+.++.+.. ....+++++
T Consensus 323 ~~~~~~~~~~~~~~~--~~~~~~i~~ 346 (348)
T TIGR01133 323 ANLEAMAEAARKLAK--PDAAKRIAE 346 (348)
T ss_pred HHHHHHHHHHHhcCC--ccHHHHHHh
Confidence 998888887776655 355666554
No 35
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.58 E-value=1.7e-13 Score=127.50 Aligned_cols=174 Identities=20% Similarity=0.195 Sum_probs=129.0
Q ss_pred ccEEEEeccCCCCC-------CCCCCCceEEEcccccCCC-CCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHH
Q psy11555 207 TSLVLVNSHFTFIG-------SRPYPNNVIEVAGLHVKSP-QPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKA 278 (484)
Q Consensus 207 ~~l~l~ns~~~l~~-------~~p~~p~v~~vG~~~~~~~-~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 278 (484)
-|.+++-++|.+.- +..+..+++++|.+.-..+ .++|... .+++..|+||.|+.. ...+++..
T Consensus 168 yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~~~-----~pE~~~Ilvs~GGG~----dG~eLi~~ 238 (400)
T COG4671 168 YDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPPHE-----APEGFDILVSVGGGA----DGAELIET 238 (400)
T ss_pred heEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCCcC-----CCccceEEEecCCCh----hhHHHHHH
Confidence 35666666665433 3345668999999822111 1222211 134568999999883 67889999
Q ss_pred HHHHHhcCCc-E--EEEEecCCCCCC-----------CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCc
Q psy11555 279 FLRAFEQIPQ-R--VIWKWEGENMSG-----------KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVP 344 (484)
Q Consensus 279 ~~~a~~~~~~-~--~i~~~~~~~~~~-----------~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP 344 (484)
.++|...++. + .+..+|+ .++. .-+++.+..|..+..-|. ..++++|+.||+||++|-+++|+|
T Consensus 239 ~l~A~~~l~~l~~~~~ivtGP-~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll-~gA~~vVSm~GYNTvCeILs~~k~ 316 (400)
T COG4671 239 ALAAAQLLAGLNHKWLIVTGP-FMPEAQRQKLLASAPKRPHISIFEFRNDFESLL-AGARLVVSMGGYNTVCEILSFGKP 316 (400)
T ss_pred HHHHhhhCCCCCcceEEEeCC-CCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHH-HhhheeeecccchhhhHHHhCCCc
Confidence 9988776543 2 3334454 2221 237999999988764443 589999999999999999999999
Q ss_pred eeeccCC---CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 345 IIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 345 ~i~~P~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.+++|.. .||.-.|+++++.|+.-++.+++++++.|+++|...++-|
T Consensus 317 aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 317 ALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARP 366 (400)
T ss_pred eEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCC
Confidence 9999985 4999999999999999999999999999999999988644
No 36
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.53 E-value=4.5e-16 Score=137.23 Aligned_cols=136 Identities=24% Similarity=0.303 Sum_probs=97.5
Q ss_pred EEEEeecceeccCCCChHHHHHH---HHHHhc--CCcEEEEEecCCCC-------CCCCCcEEEecccCcc-cccccCce
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAF---LRAFEQ--IPQRVIWKWEGENM-------SGKIDKILLKSWAPQR-DILDHPNV 323 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~---~~a~~~--~~~~~i~~~~~~~~-------~~~~~nv~~~~~~pq~-~ll~h~~~ 323 (484)
+|+|+.||... ..+.+.+ .+.+.. ...++++.+|.... .....|+.+.+|.++. +++ ..+
T Consensus 1 tilv~gGs~g~-----~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m--~~a 73 (167)
T PF04101_consen 1 TILVTGGSQGA-----RDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELM--AAA 73 (167)
T ss_dssp -EEEEETTTSH-----HHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHH--HHH
T ss_pred CEEEEECCCCH-----HHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHH--HHc
Confidence 47899998742 1122222 222222 13578888886321 1223689999999954 566 789
Q ss_pred eEEEecCCcchHHHHHhcCCceeeccCCC----chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGIPMFG----DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~P~~~----dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
|++|||||.+|++|++++|+|+|++|... +|..||..+++.|.|..+.....+.+.|.++|.++++++..+..+.+
T Consensus 74 DlvIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~~~~~~~ 153 (167)
T PF04101_consen 74 DLVISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEKLKEMAK 153 (167)
T ss_dssp SEEEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-SHHHCC
T ss_pred CEEEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHHHHHHHH
Confidence 99999999999999999999999999987 99999999999999999988888889999999999988876444433
No 37
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.45 E-value=7.3e-12 Score=125.85 Aligned_cols=158 Identities=15% Similarity=0.190 Sum_probs=116.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHH-hcCC-cEEEEEecCCC-----C---CCCCCcEEEecccCcc-cccccCce
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAF-EQIP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQR-DILDHPNV 323 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~-~~~~-~~~i~~~~~~~-----~---~~~~~nv~~~~~~pq~-~ll~h~~~ 323 (484)
+++|+++.|+.. ..+.++.+++++ +..+ .++++.+|++. + ....+++.+.+|.++. +++ ..+
T Consensus 202 ~~~ilv~~G~lg-----~~k~~~~li~~~~~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~--~~a 274 (391)
T PRK13608 202 KQTILMSAGAFG-----VSKGFDTMITDILAKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWM--ASS 274 (391)
T ss_pred CCEEEEECCCcc-----cchhHHHHHHHHHhcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHH--Hhh
Confidence 467888888773 223455555554 3333 46766666431 1 1134689999998764 456 789
Q ss_pred eEEEecCCcchHHHHHhcCCceeec-cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
|++|+.+|..|+.||+++|+|+|++ |..++|..|+..+++.|+|+... +.+++.++|.++++|++.++++++-+.
T Consensus 275 Dl~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~ 350 (391)
T PRK13608 275 QLMITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD----TPEEAIKIVASLTNGNEQLTNMISTME 350 (391)
T ss_pred hEEEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC----CHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999988888999999999999998 77777889999999999998764 688999999999999988888887777
Q ss_pred HHhCCCCChHHHHHHHHHHHHHc
Q psy11555 403 LFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 403 ~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
.... + .+.+..++.++..+..
T Consensus 351 ~~~~-~-~s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 351 QDKI-K-YATQTICRDLLDLIGH 371 (391)
T ss_pred HhcC-C-CCHHHHHHHHHHHhhh
Confidence 6654 3 4455556656555543
No 38
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.44 E-value=1.5e-11 Score=123.48 Aligned_cols=157 Identities=17% Similarity=0.219 Sum_probs=117.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-cEEEEEecCCC-----C----CCCCCcEEEecccCcc-cccccCce
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN-----M----SGKIDKILLKSWAPQR-DILDHPNV 323 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~-----~----~~~~~nv~~~~~~pq~-~ll~h~~~ 323 (484)
+++|++..|+... .+.+..+++++.+.+ .++++.+|++. + ...++|+++.+|+++. +++ ..+
T Consensus 202 ~~~il~~~G~~~~-----~k~~~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~--~~a 274 (380)
T PRK13609 202 KKILLIMAGAHGV-----LGNVKELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELF--RVT 274 (380)
T ss_pred CcEEEEEcCCCCC-----CcCHHHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHH--Hhc
Confidence 4567776676631 233566777776554 47777665321 1 1234689999999874 677 679
Q ss_pred eEEEecCCcchHHHHHhcCCceeec-cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~-P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
+++|+.+|..++.||+++|+|+|+. |..+.|..|+..+++.|+|+... +.+++.++|.++++|++.++++++-+.
T Consensus 275 D~~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~ 350 (380)
T PRK13609 275 SCMITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDMKLLQMKEAMK 350 (380)
T ss_pred cEEEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 9999999988899999999999985 67777889999999999998652 679999999999999998888887776
Q ss_pred HHhCCCCChHHHHHHHHHHHHH
Q psy11555 403 LFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 403 ~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
.+... .+.+.+++.++..+.
T Consensus 351 ~~~~~--~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 351 SLYLP--EPADHIVDDILAENH 370 (380)
T ss_pred HhCCC--chHHHHHHHHHHhhh
Confidence 66553 467777777666554
No 39
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.39 E-value=5.9e-11 Score=119.06 Aligned_cols=128 Identities=14% Similarity=0.177 Sum_probs=97.3
Q ss_pred cEEEEEecCC-C----CCC--CCCcEEEecccCcc-cccccCceeEEEecCCcchHHHHHhcCCceeeccCCCch-HHHH
Q psy11555 288 QRVIWKWEGE-N----MSG--KIDKILLKSWAPQR-DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQ-KANI 358 (484)
Q Consensus 288 ~~~i~~~~~~-~----~~~--~~~nv~~~~~~pq~-~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ-~~na 358 (484)
.++++.+|++ . +.. ...++++.+|+++. +++ ..+|++|+.+|.+++.||+++|+|+|+.+....| ..|+
T Consensus 242 ~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~--~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~ 319 (382)
T PLN02605 242 GQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWM--GACDCIITKAGPGTIAEALIRGLPIILNGYIPGQEEGNV 319 (382)
T ss_pred ceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHH--HhCCEEEECCCcchHHHHHHcCCCEEEecCCCccchhhH
Confidence 4566667643 1 111 23578999999875 455 7899999999999999999999999999765555 4799
Q ss_pred HHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 359 RVVEKAGFGVTLPYDQITEETVLVALRTVLGN-PSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 359 ~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
..+.+.|.|+.+ . ++++|.++|.++++| ++.++++++.++.... .++.+.+++.+...+
T Consensus 320 ~~i~~~g~g~~~--~--~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~--~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 320 PYVVDNGFGAFS--E--SPKEIARIVAEWFGDKSDELEAMSENALKLAR--PEAVFDIVHDLHELV 379 (382)
T ss_pred HHHHhCCceeec--C--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHh
Confidence 999999999876 2 789999999999988 8888888777776655 355566666665544
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.35 E-value=5.2e-11 Score=117.88 Aligned_cols=139 Identities=18% Similarity=0.278 Sum_probs=99.7
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC----cEEEEEecCCC---CCCCCCcEEEecccCccc---ccccCcee
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QRVIWKWEGEN---MSGKIDKILLKSWAPQRD---ILDHPNVK 324 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~---~~~~~~nv~~~~~~pq~~---ll~h~~~~ 324 (484)
++.+++..|+... .+..+.+++++..+. ..+++..++.. .....+|+.+.+++++.+ ++ ..++
T Consensus 196 ~~~~i~~~G~~~~-----~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~--~~~d 268 (364)
T cd03814 196 DRPVLLYVGRLAP-----EKNLEALLDADLPLRRRPPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAY--ASAD 268 (364)
T ss_pred CCeEEEEEecccc-----ccCHHHHHHHHHHhhhcCCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHH--HhCC
Confidence 3567778887632 333455556555542 35555444322 223567999999998775 45 6788
Q ss_pred EEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHH
Q psy11555 325 VFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 400 (484)
Q Consensus 325 ~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~ 400 (484)
+++..++ .+++.||+++|+|+|+.+..+ +...+++.+.|..++.. +.+++.++|.++++|++.++++.+-
T Consensus 269 ~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~~~g~~~~~~--~~~~l~~~i~~l~~~~~~~~~~~~~ 342 (364)
T cd03814 269 VFVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDGENGLLVEPG--DAEAFAAALAALLADPELRRRMAAR 342 (364)
T ss_pred EEEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCCcceEEcCCC--CHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 9987654 468999999999999987654 55667777999988655 7788999999999999888888777
Q ss_pred HHHHhC
Q psy11555 401 ARLFQD 406 (484)
Q Consensus 401 ~~~~~~ 406 (484)
+.....
T Consensus 343 ~~~~~~ 348 (364)
T cd03814 343 ARAEAE 348 (364)
T ss_pred HHHHHh
Confidence 766653
No 41
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.29 E-value=9.7e-10 Score=113.25 Aligned_cols=139 Identities=17% Similarity=0.224 Sum_probs=98.2
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCc-EEEEEecCCC---CCC--CCCcEEEecccCcccccc-cCceeEEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN---MSG--KIDKILLKSWAPQRDILD-HPNVKVFIS 328 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~-~~i~~~~~~~---~~~--~~~nv~~~~~~pq~~ll~-h~~~~~~It 328 (484)
..+++..|+. .+.+.++.+++++++++. ++++..++.. +.. ...+|.+.+++++.++.. ...+++||.
T Consensus 263 ~~~i~~vGrl-----~~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~ 337 (465)
T PLN02871 263 KPLIVYVGRL-----GAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVM 337 (465)
T ss_pred CeEEEEeCCC-----chhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEE
Confidence 4566777887 345678888888888754 6666554421 111 135899999998765332 267888885
Q ss_pred cCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHH---cCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy11555 329 HGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEK---AGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 329 hgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~---~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~ 401 (484)
... .+++.||+++|+|+|+....+ ....+++ .+.|..++.. +.+++.++|.++++|++.++++.+.+
T Consensus 338 pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~~--d~~~la~~i~~ll~~~~~~~~~~~~a 411 (465)
T PLN02871 338 PSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTPG--DVDDCVEKLETLLADPELRERMGAAA 411 (465)
T ss_pred CCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 543 356899999999999876543 3445555 6889999766 78999999999999988777666666
Q ss_pred HHHh
Q psy11555 402 RLFQ 405 (484)
Q Consensus 402 ~~~~ 405 (484)
+...
T Consensus 412 ~~~~ 415 (465)
T PLN02871 412 REEV 415 (465)
T ss_pred HHHH
Confidence 5543
No 42
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.28 E-value=1.3e-09 Score=110.07 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=71.2
Q ss_pred CCcEEEecccCcccccc-cCceeEEEec---CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCH
Q psy11555 303 IDKILLKSWAPQRDILD-HPNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITE 377 (484)
Q Consensus 303 ~~nv~~~~~~pq~~ll~-h~~~~~~Ith---gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~ 377 (484)
.++|.+.+++|+.++.. ...+++++.- .| ..++.|||++|+|+|+.... .....+.....|..++.. +.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~----g~~e~i~~~~~G~lv~~~--d~ 353 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTA----PVREVITDGENGLLVDFF--DP 353 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCC----CchhhcccCCceEEcCCC--CH
Confidence 46899999999876432 1466777642 22 24799999999999986543 355666666789988766 78
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy11555 378 ETVLVALRTVLGNPSYKKRAEKVARLFQ 405 (484)
Q Consensus 378 ~~l~~ai~~~l~~~~~~~~a~~~~~~~~ 405 (484)
+++.++|.++++|++.++++.+.++...
T Consensus 354 ~~la~~i~~ll~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 354 DALAAAVIELLDDPARRARLRRAARRTA 381 (396)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999999887776666555443
No 43
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.28 E-value=7.9e-11 Score=112.38 Aligned_cols=97 Identities=16% Similarity=0.200 Sum_probs=75.4
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC--cEEEEEecCCCC--------CCCCCcEEEecccCcc-cccccCcee
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENM--------SGKIDKILLKSWAPQR-DILDHPNVK 324 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~--------~~~~~nv~~~~~~pq~-~ll~h~~~~ 324 (484)
+.|++++|+.. +......+++++.+.+ .++.+.+|.... ....+|+.+..+.++. +++ ..++
T Consensus 171 ~~iLi~~GG~d-----~~~~~~~~l~~l~~~~~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm--~~aD 243 (279)
T TIGR03590 171 RRVLVSFGGAD-----PDNLTLKLLSALAESQINISITLVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELM--NEAD 243 (279)
T ss_pred CeEEEEeCCcC-----CcCHHHHHHHHHhccccCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHH--HHCC
Confidence 57999999873 3335566667776543 466677765321 1134689999999986 667 7899
Q ss_pred EEEecCCcchHHHHHhcCCceeeccCCCchHHHHHH
Q psy11555 325 VFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV 360 (484)
Q Consensus 325 ~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~ 360 (484)
++||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 244 l~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 244 LAIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9999999 8999999999999999999999999875
No 44
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.21 E-value=2e-09 Score=106.20 Aligned_cols=139 Identities=20% Similarity=0.269 Sum_probs=95.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCCCC------CCCCcEEEecccCcccccc-cCcee
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGENMS------GKIDKILLKSWAPQRDILD-HPNVK 324 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~------~~~~nv~~~~~~pq~~ll~-h~~~~ 324 (484)
++.+++..|+.. +.+....+++++..+ +.++++...+.... ...+++.+.+++++.++.. ..+++
T Consensus 190 ~~~~i~~~G~~~-----~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 264 (359)
T cd03823 190 GRLRFGFIGQLT-----PHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264 (359)
T ss_pred CceEEEEEecCc-----cccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 356777788873 234455566666554 34665554432211 1357999999998665421 16678
Q ss_pred EEEec-----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 325 VFISH-----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 325 ~~Ith-----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
++|.. |...++.||+++|+|+|+.+..+ ....+.+.+.|..++.. +.+++.+++.++++|+..++.+.+
T Consensus 265 ~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~~~~~ 338 (359)
T cd03823 265 VLVVPSIWPENFPLVIREALAAGVPVIASDIGG----MAELVRDGVNGLLFPPG--DAEDLAAALERLIDDPDLLERLRA 338 (359)
T ss_pred EEEEcCcccCCCChHHHHHHHCCCCEEECCCCC----HHHHhcCCCcEEEECCC--CHHHHHHHHHHHHhChHHHHHHHH
Confidence 88842 23457999999999999976543 56667777789998765 689999999999999887777766
Q ss_pred HHHHH
Q psy11555 400 VARLF 404 (484)
Q Consensus 400 ~~~~~ 404 (484)
-+...
T Consensus 339 ~~~~~ 343 (359)
T cd03823 339 GIEPP 343 (359)
T ss_pred hHHHh
Confidence 55444
No 45
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.19 E-value=1e-08 Score=104.08 Aligned_cols=155 Identities=15% Similarity=0.200 Sum_probs=94.8
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcC---C-cEEEEEecCCCCC--------CCCCcEEEecccCcccccc-c
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---P-QRVIWKWEGENMS--------GKIDKILLKSWAPQRDILD-H 320 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~-~~~i~~~~~~~~~--------~~~~nv~~~~~~pq~~ll~-h 320 (484)
+++.+++..|+.. +.+.++.++++++.+ + .+++...++.... ...+||.+.+++|+.++.. .
T Consensus 227 ~~~~~i~~~G~l~-----~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~ 301 (412)
T PRK10307 227 DGKKIVLYSGNIG-----EKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLPALL 301 (412)
T ss_pred CCCEEEEEcCccc-----cccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHH
Confidence 3456777788873 345566666666654 2 3555544332111 0124899999998765321 1
Q ss_pred CceeEEEe--c-CC-----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH
Q psy11555 321 PNVKVFIS--H-GG-----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 392 (484)
Q Consensus 321 ~~~~~~It--h-gG-----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~ 392 (484)
..+++++. . ++ -+.+.|++++|+|+|+....+.. ....++ +.|+.++.. +.++++++|.++++|+.
T Consensus 302 ~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i~--~~G~~~~~~--d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 302 KMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLVE--GIGVCVEPE--SVEALVAAIAALARQAL 375 (412)
T ss_pred HhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHHh--CCcEEeCCC--CHHHHHHHHHHHHhCHH
Confidence 45666542 2 22 12378999999999998764421 122333 789999766 78999999999999988
Q ss_pred HHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy11555 393 YKKRAEKVARLFQDRPMPPLDTAIYWIE 420 (484)
Q Consensus 393 ~~~~a~~~~~~~~~~~~~~~~~~~~~ie 420 (484)
.++++.+.+.....+..+. +..+.-.+
T Consensus 376 ~~~~~~~~a~~~~~~~fs~-~~~~~~~~ 402 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDK-ENVLRQFI 402 (412)
T ss_pred HHHHHHHHHHHHHHHHcCH-HHHHHHHH
Confidence 7777777666543322443 33333333
No 46
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.19 E-value=1.4e-08 Score=102.26 Aligned_cols=139 Identities=18% Similarity=0.285 Sum_probs=94.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCCC---------------CCCCCcEEEecccCc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGENM---------------SGKIDKILLKSWAPQ 314 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~---------------~~~~~nv~~~~~~pq 314 (484)
+..+++..|+... .+....+++++..+. .++++..++... .+..+|+.+.+++|+
T Consensus 219 ~~~~i~~~gr~~~-----~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 293 (398)
T cd03800 219 DKPRILAVGRLDP-----RKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSR 293 (398)
T ss_pred CCcEEEEEccccc-----ccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCH
Confidence 3567778888732 233455555555432 356665544211 123478999999998
Q ss_pred ccccc-cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 315 RDILD-HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 315 ~~ll~-h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
.++.. ...+++++.. |-..++.||+++|+|+|+.+..+ ....+++.+.|..++.. +.+++.++|.++++
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~~~g~~~~~~--~~~~l~~~i~~l~~ 367 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDGVTGLLVDPR--DPEALAAALRRLLT 367 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCCCCeEEeCCC--CHHHHHHHHHHHHh
Confidence 76421 1568888854 22468999999999999876543 55667777899998765 68999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q psy11555 390 NPSYKKRAEKVARLF 404 (484)
Q Consensus 390 ~~~~~~~a~~~~~~~ 404 (484)
|++.++++.+-+...
T Consensus 368 ~~~~~~~~~~~a~~~ 382 (398)
T cd03800 368 DPALRRRLSRAGLRR 382 (398)
T ss_pred CHHHHHHHHHHHHHH
Confidence 987776666655444
No 47
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.13 E-value=2.2e-08 Score=101.31 Aligned_cols=105 Identities=18% Similarity=0.127 Sum_probs=76.3
Q ss_pred CCCcEEEecccCccc---ccccCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCC
Q psy11555 302 KIDKILLKSWAPQRD---ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 374 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~---ll~h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~ 374 (484)
..++|.+.+++|..+ ++ ..+++++.. |...++.||+++|+|+|+....+ ....+++.+.|..++..
T Consensus 281 l~~~v~~~g~~~~~~~~~~l--~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~- 353 (405)
T TIGR03449 281 IADRVRFLPPRPPEELVHVY--RAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADGETGLLVDGH- 353 (405)
T ss_pred CCceEEECCCCCHHHHHHHH--HhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccCCceEECCCC-
Confidence 457899999998754 45 677887742 33458999999999999976543 44556667789888765
Q ss_pred CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHH
Q psy11555 375 ITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTA 415 (484)
Q Consensus 375 ~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~ 415 (484)
+.+++.++|.++++|+..++++.+.+....++ .+....+
T Consensus 354 -d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~-fsw~~~~ 392 (405)
T TIGR03449 354 -DPADWADALARLLDDPRTRIRMGAAAVEHAAG-FSWAATA 392 (405)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHh-CCHHHHH
Confidence 78999999999999988777776666555432 4433333
No 48
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.12 E-value=9.5e-09 Score=102.53 Aligned_cols=153 Identities=15% Similarity=0.184 Sum_probs=99.0
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHh----cCCcEEEEEecCCCC---------CCCCCcEEEecccCcc-cccc
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIPQRVIWKWEGENM---------SGKIDKILLKSWAPQR-DILD 319 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~~~~~i~~~~~~~~---------~~~~~nv~~~~~~pq~-~ll~ 319 (484)
++..+++++|.... .+.++.+++++. +.+.++++...+... .+..+++.+.++.++. +++
T Consensus 195 ~~~~~il~~g~l~~-----~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 268 (371)
T cd04962 195 EGEKVLIHISNFRP-----VKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDHVEELL- 268 (371)
T ss_pred CCCeEEEEeccccc-----ccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCcccHHHHH-
Confidence 34567778888742 334444455443 334566665444221 1245689998887653 445
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..++++|.- |...++.||+++|+|+|+.+.. ..+..+++...|..++.+ +.+++.++|.++++|+..++
T Consensus 269 -~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~~~G~~~~~~--~~~~l~~~i~~l~~~~~~~~ 341 (371)
T cd04962 269 -SIADLFLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHGETGFLVDVG--DVEAMAEYALSLLEDDELWQ 341 (371)
T ss_pred -HhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCCCceEEcCCC--CHHHHHHHHHHHHhCHHHHH
Confidence 567888743 3346899999999999996554 355666666789888765 78999999999999988777
Q ss_pred HHHHHHHHHhCCCCChHHHHHHHH
Q psy11555 396 RAEKVARLFQDRPMPPLDTAIYWI 419 (484)
Q Consensus 396 ~a~~~~~~~~~~~~~~~~~~~~~i 419 (484)
++++-+.....+..+....+..+.
T Consensus 342 ~~~~~~~~~~~~~fs~~~~~~~~~ 365 (371)
T cd04962 342 EFSRAARNRAAERFDSERIVPQYE 365 (371)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 766665554222245444443433
No 49
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.12 E-value=1.9e-08 Score=99.50 Aligned_cols=140 Identities=18% Similarity=0.240 Sum_probs=97.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-cEEEEEecCCC---------CCCCCCcEEEecccCcccccc-cCce
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN---------MSGKIDKILLKSWAPQRDILD-HPNV 323 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~~ll~-h~~~ 323 (484)
+..+++..|+.. +.+..+.++++++++. .++++..+++. .....+||.+.+|+|+.++.. ...+
T Consensus 190 ~~~~i~~~G~~~-----~~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a 264 (357)
T cd03795 190 GRPFFLFVGRLV-----YYKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC 264 (357)
T ss_pred CCcEEEEecccc-----cccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC
Confidence 456778888873 3455677888887776 56665544421 123467999999999765332 1567
Q ss_pred eEEEec-----CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHH-cCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHH
Q psy11555 324 KVFISH-----GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEK-AGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 396 (484)
Q Consensus 324 ~~~Ith-----gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~ 396 (484)
++++.- .| ..++.||+++|+|+|+.+..+.. ..+.. .+.|..++.+ +.+++.++|.++++|++.+++
T Consensus 265 d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i~~~~~~g~~~~~~--d~~~~~~~i~~l~~~~~~~~~ 338 (357)
T cd03795 265 DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYVNLHGVTGLVVPPG--DPAALAEAIRRLLEDPELRER 338 (357)
T ss_pred CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHHhhCCCceEEeCCC--CHHHHHHHHHHHHHCHHHHHH
Confidence 787732 23 34799999999999997655533 34444 6789888755 789999999999999987777
Q ss_pred HHHHHHHHh
Q psy11555 397 AEKVARLFQ 405 (484)
Q Consensus 397 a~~~~~~~~ 405 (484)
+++.+...-
T Consensus 339 ~~~~~~~~~ 347 (357)
T cd03795 339 LGEAARERA 347 (357)
T ss_pred HHHHHHHHH
Confidence 766655543
No 50
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.11 E-value=8.8e-10 Score=110.30 Aligned_cols=158 Identities=15% Similarity=0.080 Sum_probs=103.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCC----CCC----C--CCCcEEEecccCcccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGE----NMS----G--KIDKILLKSWAPQRDILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~----~~~----~--~~~nv~~~~~~pq~~ll~ 319 (484)
+++|++.-||... .. .+....+++++..+ + .++++...+. ... . ....+.+..+ ...+++
T Consensus 191 ~~~Ilvl~GSR~a--ei-~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l- 265 (385)
T TIGR00215 191 GETLALLPGSRGS--EV-EKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG-DARKAM- 265 (385)
T ss_pred CCEEEEECCCCHH--HH-HHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc-hHHHHH-
Confidence 4667776777742 11 34455566554433 2 2454433221 011 0 1223443332 223456
Q ss_pred cCceeEEEecCCcchHHHHHhcCCceeec----cCCC---------chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHH
Q psy11555 320 HPNVKVFISHGGFLGTTEALYSGVPIIGI----PMFG---------DQKANIRVVEKAGFGVTLPYDQITEETVLVALRT 386 (484)
Q Consensus 320 h~~~~~~IthgG~~s~~Eal~~gvP~i~~----P~~~---------dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 386 (484)
..+|++|+.+|..|+ |++++|+|+|++ |+.. .|..|+..+...|++..+..++.|++.|.+++.+
T Consensus 266 -~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ 343 (385)
T TIGR00215 266 -FAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLL 343 (385)
T ss_pred -HhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHH
Confidence 789999999998777 999999999999 7631 3788999999999999988889999999999999
Q ss_pred HhCCH----HHHHHHHHHHHHHhCCC--CChHHHHHHHH
Q psy11555 387 VLGNP----SYKKRAEKVARLFQDRP--MPPLDTAIYWI 419 (484)
Q Consensus 387 ~l~~~----~~~~~a~~~~~~~~~~~--~~~~~~~~~~i 419 (484)
+++|+ ++++++++--+.++.+- .++.++++..|
T Consensus 344 ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 344 LLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred HhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99998 76666555444443321 35567777654
No 51
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.11 E-value=5e-09 Score=104.29 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=92.9
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----CcEEEEEecCCCC--------CCCCCcEEEecccCcccccc-cC
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGENM--------SGKIDKILLKSWAPQRDILD-HP 321 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~~--------~~~~~nv~~~~~~pq~~ll~-h~ 321 (484)
++.+++..|+... .+..+.+++++..+ +.++++...+... ....+|+.+.+++++.++.. ..
T Consensus 219 ~~~~i~~~G~~~~-----~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 293 (394)
T cd03794 219 DKFVVLYAGNIGR-----AQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLA 293 (394)
T ss_pred CcEEEEEecCccc-----ccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHH
Confidence 4677778888732 33344455554443 3355444333211 12357899999998765431 16
Q ss_pred ceeEEEecCC---------cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH
Q psy11555 322 NVKVFISHGG---------FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 392 (484)
Q Consensus 322 ~~~~~IthgG---------~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~ 392 (484)
.++++|.... -+++.||+++|+|+|+.+..+.+ ..+.+.+.|..++.. +.+++.++|.++++|++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~----~~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESA----ELVEEAGAGLVVPPG--DPEALAAAILELLDDPE 367 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCch----hhhccCCcceEeCCC--CHHHHHHHHHHHHhChH
Confidence 7888875433 23479999999999998876643 344444788888765 78999999999999988
Q ss_pred HHHHHHHHHHHHhC
Q psy11555 393 YKKRAEKVARLFQD 406 (484)
Q Consensus 393 ~~~~a~~~~~~~~~ 406 (484)
.++++.+.+.....
T Consensus 368 ~~~~~~~~~~~~~~ 381 (394)
T cd03794 368 ERAEMGENGRRYVE 381 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777766655543
No 52
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.10 E-value=1.9e-08 Score=98.30 Aligned_cols=150 Identities=17% Similarity=0.297 Sum_probs=95.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCCC---------CCCCCcEEEecccCc-ccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGENM---------SGKIDKILLKSWAPQ-RDILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~~---------~~~~~nv~~~~~~pq-~~ll~ 319 (484)
+..+++.+|+... .+....+++++..+ + .++++...+... .+..+++.+.++..+ .+++
T Consensus 177 ~~~~i~~~g~~~~-----~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 250 (348)
T cd03820 177 KSKRILAVGRLVP-----QKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYY- 250 (348)
T ss_pred CCcEEEEEEeecc-----ccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHH-
Confidence 3566777887732 33344455554433 2 255554433211 124567888887333 2445
Q ss_pred cCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcC-cEEEecCCCCCHHHHHHHHHHHhCCHHHH
Q psy11555 320 HPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG-FGVTLPYDQITEETVLVALRTVLGNPSYK 394 (484)
Q Consensus 320 h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G-~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 394 (484)
.+++++|.... .+++.||+++|+|+|+.+..+.+ ..+.+.| .|..++.. +.+++.++|.++++|++.+
T Consensus 251 -~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~~~~~~g~~~~~~--~~~~~~~~i~~ll~~~~~~ 323 (348)
T cd03820 251 -AKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEIIEDGVNGLLVPNG--DVEALAEALLRLMEDEELR 323 (348)
T ss_pred -HhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCch----HhhhccCcceEEeCCC--CHHHHHHHHHHHHcCHHHH
Confidence 56788876642 46899999999999997655433 3344555 89888655 6799999999999999988
Q ss_pred HHHHHHHHHHhCCCCChHHHHHHH
Q psy11555 395 KRAEKVARLFQDRPMPPLDTAIYW 418 (484)
Q Consensus 395 ~~a~~~~~~~~~~~~~~~~~~~~~ 418 (484)
+++.+.+..+..+ .+....+-.|
T Consensus 324 ~~~~~~~~~~~~~-~~~~~~~~~~ 346 (348)
T cd03820 324 KRMGANARESAER-FSIENIIKQW 346 (348)
T ss_pred HHHHHHHHHHHHH-hCHHHHHHHh
Confidence 8887776555442 4544444333
No 53
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.10 E-value=4e-08 Score=100.48 Aligned_cols=155 Identities=13% Similarity=0.105 Sum_probs=99.4
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecC-CCCC--------------------CCCCcEEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEG-ENMS--------------------GKIDKILLK 309 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~-~~~~--------------------~~~~nv~~~ 309 (484)
..++++.|.. .+.+.+..+++|++.++ .++++..|+ +... .+.++|.+.
T Consensus 248 ~~~i~~vGrl-----~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~ 322 (439)
T TIGR02472 248 KPPILAISRP-----DRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYP 322 (439)
T ss_pred CcEEEEEcCC-----cccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEec
Confidence 4577788887 34556777777776421 233333343 2110 145678888
Q ss_pred cccCccccccc-Cce----eEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHH
Q psy11555 310 SWAPQRDILDH-PNV----KVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV 380 (484)
Q Consensus 310 ~~~pq~~ll~h-~~~----~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 380 (484)
+++++.++... ..+ ++|+... -..++.||+++|+|+|+....+ ....+.+...|..++.. +++++
T Consensus 323 g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~~~G~lv~~~--d~~~l 396 (439)
T TIGR02472 323 KHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANCRNGLLVDVL--DLEAI 396 (439)
T ss_pred CCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCCCcEEEeCCC--CHHHH
Confidence 88887765321 333 7887643 2468999999999999976543 45556666689998766 78999
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Q psy11555 381 LVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHV 422 (484)
Q Consensus 381 ~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~ 422 (484)
+++|.++++|+..++++.+.+.....+..+ .+..+.-++.+
T Consensus 397 a~~i~~ll~~~~~~~~~~~~a~~~~~~~fs-w~~~~~~~~~l 437 (439)
T TIGR02472 397 ASALEDALSDSSQWQLWSRNGIEGVRRHYS-WDAHVEKYLRI 437 (439)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHH
Confidence 999999999988777666665443222233 44444444433
No 54
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.06 E-value=1.6e-08 Score=99.52 Aligned_cols=137 Identities=22% Similarity=0.354 Sum_probs=93.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC---------CCCCCCcEEEecccCcccccc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN---------MSGKIDKILLKSWAPQRDILD- 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~~ll~- 319 (484)
+..+++.+|+.. +.+....+++++..+. .++++..++.. ....++++.+.+++++.++..
T Consensus 198 ~~~~i~~~g~~~-----~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 272 (374)
T cd03801 198 DEPVILFVGRLV-----PRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPAL 272 (374)
T ss_pred CCeEEEEecchh-----hhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHH
Confidence 456778888873 2334555555554432 24444333211 123578999999998654321
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..+++++|.. |+.+++.||+++|+|+|+.+.. .....+++.+.|..++.. +.+++.++|.++++|++.++
T Consensus 273 ~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~----~~~~~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~~~~~ 346 (374)
T cd03801 273 YAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG----GIPEVVEDGETGLLVPPG--DPEALAEAILRLLDDPELRR 346 (374)
T ss_pred HHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC----ChhHHhcCCcceEEeCCC--CHHHHHHHHHHHHcChHHHH
Confidence 1567888743 4467899999999999997653 355666667889988755 68999999999999988777
Q ss_pred HHHHHHH
Q psy11555 396 RAEKVAR 402 (484)
Q Consensus 396 ~a~~~~~ 402 (484)
++.+-+.
T Consensus 347 ~~~~~~~ 353 (374)
T cd03801 347 RLGEAAR 353 (374)
T ss_pred HHHHHHH
Confidence 6666655
No 55
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.05 E-value=2.1e-08 Score=99.26 Aligned_cols=139 Identities=19% Similarity=0.361 Sum_probs=90.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCCC---------CCCCCCcEEEecccCcccccc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGEN---------MSGKIDKILLKSWAPQRDILD- 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~~ll~- 319 (484)
++.+++..|+... .+..+.+++++..+ +.++++..++.. ..+..+|+.+.+++|+.++..
T Consensus 201 ~~~~i~~~G~~~~-----~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 275 (374)
T cd03817 201 DEPVLLYVGRLAK-----EKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDY 275 (374)
T ss_pred CCeEEEEEeeeec-----ccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHH
Confidence 4567777888743 22234444444432 235555544321 123567999999999876421
Q ss_pred cCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 320 HPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 320 h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..++++++..+ +.+++.||+++|+|+|+.+..+ .+..+++.+.|..++..+ . ++.+++.++++|++.++
T Consensus 276 ~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~----~~~~i~~~~~g~~~~~~~--~-~~~~~i~~l~~~~~~~~ 348 (374)
T cd03817 276 YKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPG----LPDLVADGENGFLFPPGD--E-ALAEALLRLLQDPELRR 348 (374)
T ss_pred HHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCC----hhhheecCceeEEeCCCC--H-HHHHHHHHHHhChHHHH
Confidence 15678887443 3468999999999999976433 556677778899987542 3 89999999999987665
Q ss_pred HHHHHHHHHh
Q psy11555 396 RAEKVARLFQ 405 (484)
Q Consensus 396 ~a~~~~~~~~ 405 (484)
.+.+-++...
T Consensus 349 ~~~~~~~~~~ 358 (374)
T cd03817 349 RLSKNAEESA 358 (374)
T ss_pred HHHHHHHHHH
Confidence 5555544443
No 56
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.05 E-value=2.4e-09 Score=107.43 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=73.8
Q ss_pred cccccCceeEEEecCCcchHHHHHhcCCceeeccCCC--------chHHH-----HHHHHHcCcEEEecCCCCCHHHHHH
Q psy11555 316 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG--------DQKAN-----IRVVEKAGFGVTLPYDQITEETVLV 382 (484)
Q Consensus 316 ~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~--------dQ~~n-----a~~~~~~G~g~~l~~~~~~~~~l~~ 382 (484)
+++ ..+|++|+.+|.+++ ||+++|+|+|++|-.. .|..| +..+.+.|++..+..++.++++|.+
T Consensus 257 ~~~--~~aDl~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 333 (380)
T PRK00025 257 EAM--AAADAALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLAR 333 (380)
T ss_pred HHH--HhCCEEEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHH
Confidence 445 789999999998776 9999999999996432 12122 2333333444444446678999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHhCC-CCChHHHHHHHHHHHHH
Q psy11555 383 ALRTVLGNPSYKKRAEKVARLFQDR-PMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 383 ai~~~l~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~ie~~~~ 424 (484)
++.++++|++.++++.+-.+..+.. ..++.+++++.|...++
T Consensus 334 ~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 334 ALLPLLADGARRQALLEGFTELHQQLRCGADERAAQAVLELLK 376 (380)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhh
Confidence 9999999998887666654323221 24688888888887664
No 57
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.04 E-value=4e-08 Score=96.54 Aligned_cols=137 Identities=18% Similarity=0.277 Sum_probs=91.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCCC----------CCCCCcEEEecccCcc-ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGENM----------SGKIDKILLKSWAPQR-DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~~----------~~~~~nv~~~~~~pq~-~ll 318 (484)
++.+++..|+... .+..+.+++++..+ + .++++..++... ....++|.+.++..+. +++
T Consensus 187 ~~~~i~~~G~~~~-----~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (359)
T cd03808 187 DDPVFLFVARLLK-----DKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELL 261 (359)
T ss_pred CCcEEEEEecccc-----ccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHH
Confidence 4678888888732 23344555555443 2 355554443211 0124678888874442 344
Q ss_pred ccCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHH
Q psy11555 319 DHPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 394 (484)
Q Consensus 319 ~h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 394 (484)
.+++++|..+. .+++.||+++|+|+|+.+..+ ....+++.+.|..++.+ +.+++.++|.+++.|++.+
T Consensus 262 --~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~~~g~~~~~~--~~~~~~~~i~~l~~~~~~~ 333 (359)
T cd03808 262 --AAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDGVNGFLVPPG--DAEALADAIERLIEDPELR 333 (359)
T ss_pred --HhccEEEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcCcceEEECCC--CHHHHHHHHHHHHhCHHHH
Confidence 56788886543 568999999999999976544 34566667889988765 7899999999999998877
Q ss_pred HHHHHHHHHH
Q psy11555 395 KRAEKVARLF 404 (484)
Q Consensus 395 ~~a~~~~~~~ 404 (484)
+++.+.+...
T Consensus 334 ~~~~~~~~~~ 343 (359)
T cd03808 334 ARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHH
Confidence 7666655544
No 58
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.03 E-value=7.9e-08 Score=97.56 Aligned_cols=138 Identities=17% Similarity=0.223 Sum_probs=87.5
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----------C-cEEEEEecCCCCC-------C-CCCcEEEe-cccCc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----------P-QRVIWKWEGENMS-------G-KIDKILLK-SWAPQ 314 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----------~-~~~i~~~~~~~~~-------~-~~~nv~~~-~~~pq 314 (484)
+..++++.|... +.+.++.+++|+..+ + .++++..++.... + .-+|+.+. +|+|.
T Consensus 231 ~~~vi~~~grl~-----~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~ 305 (415)
T cd03816 231 RPALLVSSTSWT-----PDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSA 305 (415)
T ss_pred CceEEEEecccc-----CCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCH
Confidence 356667778763 234455556655442 1 2444444332211 1 12456655 68886
Q ss_pred ccccc-cCceeEEEe----cCC---cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHH
Q psy11555 315 RDILD-HPNVKVFIS----HGG---FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRT 386 (484)
Q Consensus 315 ~~ll~-h~~~~~~It----hgG---~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 386 (484)
.++.. ...+++++. .-| -+++.||+++|+|+|+.... .....+++.+.|..++ +.++|+++|.+
T Consensus 306 ~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~~~G~lv~----d~~~la~~i~~ 377 (415)
T cd03816 306 EDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHGENGLVFG----DSEELAEQLID 377 (415)
T ss_pred HHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCCCCEEEEC----CHHHHHHHHHH
Confidence 65422 167788874 112 34699999999999986543 4556777788999883 68999999999
Q ss_pred HhCC---HHHHHHHHHHHHHHh
Q psy11555 387 VLGN---PSYKKRAEKVARLFQ 405 (484)
Q Consensus 387 ~l~~---~~~~~~a~~~~~~~~ 405 (484)
+++| ++.++++++-++.+.
T Consensus 378 ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 378 LLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHhcCCCHHHHHHHHHHHHHhh
Confidence 9998 777776666655554
No 59
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.99 E-value=1.2e-08 Score=102.26 Aligned_cols=157 Identities=20% Similarity=0.123 Sum_probs=106.4
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----CcEEEEEecC-CCCC---------CCC--------------CcE
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEG-ENMS---------GKI--------------DKI 306 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~-~~~~---------~~~--------------~nv 306 (484)
.+.|++--||... .....+..+++++..+ +..|++.+.+ .... ... +++
T Consensus 205 ~~~lllLpGSR~a---e~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 281 (396)
T TIGR03492 205 RFRIALLPGSRPP---EAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTL 281 (396)
T ss_pred CCEEEEECCCCHH---HHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCce
Confidence 3577777777732 1122344566666554 3578887733 2111 111 235
Q ss_pred EEecccCc-ccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc----CcEEEecCCCCCHHHHH
Q psy11555 307 LLKSWAPQ-RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA----GFGVTLPYDQITEETVL 381 (484)
Q Consensus 307 ~~~~~~pq-~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~----G~g~~l~~~~~~~~~l~ 381 (484)
.+..+..+ .+++ ..++++|+.+|..| .|++..|+|+|++|.-..|. |+..+++. |.++.+... +.+.|.
T Consensus 282 ~v~~~~~~~~~~l--~~ADlvI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~~--~~~~l~ 355 (396)
T TIGR03492 282 EVLLGRGAFAEIL--HWADLGIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLASK--NPEQAA 355 (396)
T ss_pred EEEechHhHHHHH--HhCCEEEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCCC--CHHHHH
Confidence 55555433 3456 68999999999755 99999999999999878887 99888775 777777543 569999
Q ss_pred HHHHHHhCCHHHHHHHH-HHHHHHhCCCCChHHHHHHHHHHH
Q psy11555 382 VALRTVLGNPSYKKRAE-KVARLFQDRPMPPLDTAIYWIEHV 422 (484)
Q Consensus 382 ~ai~~~l~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~ie~~ 422 (484)
+++.++++|++.++++. +..+.+.+ .++.+++++.|+..
T Consensus 356 ~~l~~ll~d~~~~~~~~~~~~~~lg~--~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 356 QVVRQLLADPELLERCRRNGQERMGP--PGASARIAESILKQ 395 (396)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHh
Confidence 99999999988877776 44444544 36778888777653
No 60
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.97 E-value=4.5e-07 Score=91.29 Aligned_cols=137 Identities=15% Similarity=0.160 Sum_probs=89.4
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHh----cC----CcEEEEEecCCCC------------------CCCCCcEEE
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QI----PQRVIWKWEGENM------------------SGKIDKILL 308 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~----~~~~i~~~~~~~~------------------~~~~~nv~~ 308 (484)
+..++++.|.... .+.++.+++++. +. +.++++..++... .++.++|.+
T Consensus 210 ~~~~i~~~grl~~-----~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f 284 (392)
T cd03805 210 GKKTFLSINRFER-----KKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIF 284 (392)
T ss_pred CceEEEEEeeecc-----cCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEE
Confidence 4677778888743 233344444443 32 3355555443210 234579999
Q ss_pred ecccCcccccc-cCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHH
Q psy11555 309 KSWAPQRDILD-HPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVA 383 (484)
Q Consensus 309 ~~~~pq~~ll~-h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~a 383 (484)
.+++|+.++.. ...+++++.... ..++.||+++|+|+|+.-..+ ....+.+.+.|..++. +.+++.++
T Consensus 285 ~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~~~g~~~~~---~~~~~a~~ 357 (392)
T cd03805 285 LPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDGETGFLCEP---TPEEFAEA 357 (392)
T ss_pred eCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccCCceEEeCC---CHHHHHHH
Confidence 99999864321 166777774321 357899999999999975543 3455666678888753 68999999
Q ss_pred HHHHhCCHHHHHHHHHHHHH
Q psy11555 384 LRTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 384 i~~~l~~~~~~~~a~~~~~~ 403 (484)
|.++++|++.++++.+-+..
T Consensus 358 i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 358 MLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred HHHHHhChHHHHHHHHHHHH
Confidence 99999998777666665544
No 61
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.96 E-value=3.1e-07 Score=90.86 Aligned_cols=137 Identities=18% Similarity=0.218 Sum_probs=91.1
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC-----------CCCCCCcEEEecccCccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN-----------MSGKIDKILLKSWAPQRDIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~-----------~~~~~~nv~~~~~~pq~~ll 318 (484)
+..+++..|+... .+....+++++..+. .++++...+.. .....+++.+.+|+++.++.
T Consensus 202 ~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 276 (375)
T cd03821 202 DKRIILFLGRLHP-----KKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKA 276 (375)
T ss_pred CCcEEEEEeCcch-----hcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHH
Confidence 4667788888732 334455555554432 24444333211 11246799999999966542
Q ss_pred c-cCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 319 D-HPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 319 ~-h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
. ..+++++|... -.+++.||+++|+|+|+.+..+ ....+.. +.|...+. +.+++.++|.++++|++.
T Consensus 277 ~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~-~~~~~~~~---~~~~~~~~i~~l~~~~~~ 348 (375)
T cd03821 277 AALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY-GCGWVVDD---DVDALAAALRRALELPQR 348 (375)
T ss_pred HHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc-CceEEeCC---ChHHHHHHHHHHHhCHHH
Confidence 1 15677877543 2468999999999999976543 4455555 88888764 459999999999999877
Q ss_pred HHHHHHHHHHH
Q psy11555 394 KKRAEKVARLF 404 (484)
Q Consensus 394 ~~~a~~~~~~~ 404 (484)
++++.+.+...
T Consensus 349 ~~~~~~~~~~~ 359 (375)
T cd03821 349 LKAMGENGRAL 359 (375)
T ss_pred HHHHHHHHHHH
Confidence 77777766665
No 62
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.94 E-value=7.7e-08 Score=95.14 Aligned_cols=138 Identities=20% Similarity=0.290 Sum_probs=89.5
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCCCC---------CCCCCcEEEecccCcccccc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGENM---------SGKIDKILLKSWAPQRDILD- 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~---------~~~~~nv~~~~~~pq~~ll~- 319 (484)
++..++.+|+.. +.+....+++++..+ +.++++..+++.. .+.++||.+.+++|+.++..
T Consensus 178 ~~~~i~~~g~~~-----~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~ 252 (355)
T cd03799 178 EPLRILSVGRLV-----EKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVREL 252 (355)
T ss_pred CCeEEEEEeeec-----cccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHH
Confidence 356677778763 233344455554433 2345554443221 12468999999998765432
Q ss_pred cCceeEEEe----------cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 320 HPNVKVFIS----------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 320 h~~~~~~It----------hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
..++++++. -|.-+++.||+++|+|+|+.+..+ ....+++...|..++.+ +.+++.++|.++++
T Consensus 253 ~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~~~g~~~~~~--~~~~l~~~i~~~~~ 326 (355)
T cd03799 253 LRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDGETGLLVPPG--DPEALADAIERLLD 326 (355)
T ss_pred HHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCCCceEEeCCC--CHHHHHHHHHHHHh
Confidence 156777776 334468999999999999976543 22345555589888755 78999999999999
Q ss_pred CHHHHHHHHHHHHH
Q psy11555 390 NPSYKKRAEKVARL 403 (484)
Q Consensus 390 ~~~~~~~a~~~~~~ 403 (484)
|+..++++.+.+..
T Consensus 327 ~~~~~~~~~~~a~~ 340 (355)
T cd03799 327 DPELRREMGEAGRA 340 (355)
T ss_pred CHHHHHHHHHHHHH
Confidence 98766555555443
No 63
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.93 E-value=3.9e-07 Score=90.18 Aligned_cols=108 Identities=19% Similarity=0.229 Sum_probs=76.5
Q ss_pred CCCcEEEecc-cCcccccc-cCceeEEEec------CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCC
Q psy11555 302 KIDKILLKSW-APQRDILD-HPNVKVFISH------GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 373 (484)
Q Consensus 302 ~~~nv~~~~~-~pq~~ll~-h~~~~~~Ith------gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~ 373 (484)
..++|.+.+. +|+.++.. ...+++++.. |..+++.||+++|+|+|+.+..+ ...+...+.|..++..
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~~~g~~~~~~ 319 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDGGTGLLVPPG 319 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeCCCcEEEcCC
Confidence 4568888864 88754332 2677888732 33457999999999999987654 3445667888888765
Q ss_pred CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHH
Q psy11555 374 QITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIY 417 (484)
Q Consensus 374 ~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 417 (484)
+.+++.++|.++++|++.++++.+.+.....+ .+....+-.
T Consensus 320 --d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~ 360 (366)
T cd03822 320 --DPAALAEAIRRLLADPELAQALRARAREYARA-MSWERVAER 360 (366)
T ss_pred --CHHHHHHHHHHHHcChHHHHHHHHHHHHHHhh-CCHHHHHHH
Confidence 68999999999999987777777766666554 554444333
No 64
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.93 E-value=4.9e-07 Score=90.00 Aligned_cols=96 Identities=20% Similarity=0.282 Sum_probs=72.7
Q ss_pred CCCcEEEecccCcccccc-cCceeEEEecC----------CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEe
Q psy11555 302 KIDKILLKSWAPQRDILD-HPNVKVFISHG----------GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL 370 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~ll~-h~~~~~~Ithg----------G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l 370 (484)
..+++.+.+++|+.++.. ...++++|..+ ..+++.||+++|+|+|+.+..+ ++..+.+.+.|..+
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~~~g~~~ 318 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDGETGLLV 318 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecCCeeEEE
Confidence 467899999998765421 16678877532 3468999999999999977654 56677778899998
Q ss_pred cCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy11555 371 PYDQITEETVLVALRTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 371 ~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~ 403 (484)
+.. +.+++.++|.++++|++.++++.+-+..
T Consensus 319 ~~~--d~~~l~~~i~~l~~~~~~~~~~~~~a~~ 349 (367)
T cd05844 319 PEG--DVAALAAALGRLLADPDLRARMGAAGRR 349 (367)
T ss_pred CCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 755 7899999999999998866666554443
No 65
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.91 E-value=1.2e-07 Score=93.75 Aligned_cols=138 Identities=16% Similarity=0.187 Sum_probs=86.6
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCCCCC-------------CCCCcEEEecccCcc
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGENMS-------------GKIDKILLKSWAPQR 315 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~-------------~~~~nv~~~~~~pq~ 315 (484)
++..+++..|.... .+....+++++..+ +.++++...+.... +..++|++.++.++.
T Consensus 183 ~~~~~i~~~Gr~~~-----~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 257 (355)
T cd03819 183 KGKPVILLPGRLTR-----WKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDM 257 (355)
T ss_pred CCceEEEEeecccc-----ccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccH
Confidence 34567777787632 23334444444332 23555544432111 345789999985432
Q ss_pred -cccccCceeEEEecC-----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh-
Q psy11555 316 -DILDHPNVKVFISHG-----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL- 388 (484)
Q Consensus 316 -~ll~h~~~~~~Ithg-----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l- 388 (484)
+++ .+++++|.-. ..+++.||+++|+|+|+....+ ....+.+.+.|..++.+ +.+++.++|..++
T Consensus 258 ~~~l--~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~~~~g~~~~~~--~~~~l~~~i~~~~~ 329 (355)
T cd03819 258 PAAY--ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRPGETGLLVPPG--DAEALAQALDQILS 329 (355)
T ss_pred HHHH--HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhCCCceEEeCCC--CHHHHHHHHHHHHh
Confidence 345 5677777543 2358999999999999865433 45566666689998765 8899999997555
Q ss_pred CCHHHHHHHHHHHHHH
Q psy11555 389 GNPSYKKRAEKVARLF 404 (484)
Q Consensus 389 ~~~~~~~~a~~~~~~~ 404 (484)
.+++.++++.+-++..
T Consensus 330 ~~~~~~~~~~~~a~~~ 345 (355)
T cd03819 330 LLPEGRAKMFAKARMC 345 (355)
T ss_pred hCHHHHHHHHHHHHHH
Confidence 4666666555555444
No 66
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.91 E-value=2.3e-07 Score=91.54 Aligned_cols=128 Identities=16% Similarity=0.276 Sum_probs=85.7
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCCC---------CCCCCcEEEecccCcccccc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGENM---------SGKIDKILLKSWAPQRDILD- 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~---------~~~~~nv~~~~~~pq~~ll~- 319 (484)
+..+++..|+... .+..+.+++++..+. ..+++...+... .+..+|+.+.+++++.++..
T Consensus 201 ~~~~i~~~g~~~~-----~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 275 (377)
T cd03798 201 DKKVILFVGRLVP-----RKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAY 275 (377)
T ss_pred CceEEEEeccCcc-----ccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHH
Confidence 4677788888732 333444555544432 244443332211 12467999999998765321
Q ss_pred cCceeEEEe----cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 320 HPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 320 h~~~~~~It----hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
..+++++|. -|..+++.||+++|+|+|+.+..+ ....+.+.+.|..++.. +.+++.++|.++++++..
T Consensus 276 ~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~~~g~~~~~~--~~~~l~~~i~~~~~~~~~ 347 (377)
T cd03798 276 YAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDGENGLLVPPG--DPEALAEAILRLLADPWL 347 (377)
T ss_pred HHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCCcceeEECCC--CHHHHHHHHHHHhcCcHH
Confidence 156777773 345578999999999999876544 45667777778888655 789999999999988874
No 67
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.89 E-value=2.6e-07 Score=100.36 Aligned_cols=168 Identities=13% Similarity=0.159 Sum_probs=109.6
Q ss_pred cchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecC-CC---C---------------
Q psy11555 244 NDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEG-EN---M--------------- 299 (484)
Q Consensus 244 ~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~-~~---~--------------- 299 (484)
.++..|+...+ .+++++.|.. .+.+.+..+++|+..+. ..+.+..|+ +. +
T Consensus 468 ~~l~r~~~~pd-kpvIL~VGRL-----~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 468 SEIMRFFTNPR-KPMILALARP-----DPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred HHHHhhcccCC-CcEEEEEcCC-----ccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHH
Confidence 35667776554 4566778888 45666777888876652 123233343 11 1
Q ss_pred --CCCCCcEEEecccCccccccc-Cce----eEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEE
Q psy11555 300 --SGKIDKILLKSWAPQRDILDH-PNV----KVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGV 368 (484)
Q Consensus 300 --~~~~~nv~~~~~~pq~~ll~h-~~~----~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~ 368 (484)
..+.++|.+.+++++.++-.. ..+ ++||... =..++.||+++|+|+|+....+ ....++....|+
T Consensus 542 ~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g~nGl 617 (1050)
T TIGR02468 542 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVLDNGL 617 (1050)
T ss_pred HHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccCCcEE
Confidence 124578999999888765321 222 5787642 2358999999999999976544 334455556899
Q ss_pred EecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 369 TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 369 ~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
.+++. +.+.|+++|.++++|+..++++.+.+.....+ ++-...+..+++.+..
T Consensus 618 LVdP~--D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~~-FSWe~ia~~yl~~i~~ 670 (1050)
T TIGR02468 618 LVDPH--DQQAIADALLKLVADKQLWAECRQNGLKNIHL-FSWPEHCKTYLSRIAS 670 (1050)
T ss_pred EECCC--CHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHH
Confidence 99766 78999999999999998877777665544332 5555555555544443
No 68
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.88 E-value=1e-06 Score=88.17 Aligned_cols=140 Identities=19% Similarity=0.278 Sum_probs=87.9
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCCC---------CCCCCcEEEecccCc-ccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGENM---------SGKIDKILLKSWAPQ-RDILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~---------~~~~~nv~~~~~~pq-~~ll~ 319 (484)
++.++++.|.... ......+++.+.+...+.+ .++++..+++.. .+..+++.+.++..+ .+++
T Consensus 193 ~~~~i~~vGrl~~-~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 270 (374)
T TIGR03088 193 ESVVVGTVGRLQA-VKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALM- 270 (374)
T ss_pred CCeEEEEEecCCc-ccCHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHH-
Confidence 4677888888743 2223333444433333332 355655443211 123456777665433 2445
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..++++|.- |..+++.||+++|+|+|+.+..+ +...+++...|..++.. +.+++.++|.++++|+..++
T Consensus 271 -~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~~~g~~~~~~--d~~~la~~i~~l~~~~~~~~ 343 (374)
T TIGR03088 271 -QALDLFVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHGVTGALVPPG--DAVALARALQPYVSDPAARR 343 (374)
T ss_pred -HhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCCCceEEeCCC--CHHHHHHHHHHHHhCHHHHH
Confidence 567777742 33568999999999999976644 45566666789888765 78999999999999887666
Q ss_pred HHHHHHHH
Q psy11555 396 RAEKVARL 403 (484)
Q Consensus 396 ~a~~~~~~ 403 (484)
.+.+-++.
T Consensus 344 ~~~~~a~~ 351 (374)
T TIGR03088 344 AHGAAGRA 351 (374)
T ss_pred HHHHHHHH
Confidence 55544443
No 69
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.86 E-value=4e-07 Score=90.19 Aligned_cols=134 Identities=16% Similarity=0.192 Sum_probs=88.4
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCC---------CCCCCCcEEEecccCc-ccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN---------MSGKIDKILLKSWAPQ-RDILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~---------~~~~~~nv~~~~~~pq-~~ll~ 319 (484)
++.+++..|+.. +.+.++.+++++..+ + .++++..+++. ..+..+++.+.++..+ .+++
T Consensus 191 ~~~~i~~vGr~~-----~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 264 (358)
T cd03812 191 DKFVIGHVGRFS-----EQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVPELL- 264 (358)
T ss_pred CCEEEEEEeccc-----cccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHHHHH-
Confidence 467788888873 334455555555443 2 35555544321 1235678999998544 3455
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..++++|.. |-.+++.|||++|+|+|+....+ ....+.+ +.|...... ++++++++|.++++|+..++
T Consensus 265 -~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~-~~~~~~~~~--~~~~~a~~i~~l~~~~~~~~ 336 (358)
T cd03812 265 -QAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD-LVKFLSLDE--SPEIWAEEILKLKSEDRRER 336 (358)
T ss_pred -HhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc-CccEEeCCC--CHHHHHHHHHHHHhCcchhh
Confidence 567788754 34578999999999999876554 3344444 566665433 57999999999999999887
Q ss_pred HHHHHHH
Q psy11555 396 RAEKVAR 402 (484)
Q Consensus 396 ~a~~~~~ 402 (484)
++...+.
T Consensus 337 ~~~~~~~ 343 (358)
T cd03812 337 SSESIKK 343 (358)
T ss_pred hhhhhhh
Confidence 7765554
No 70
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.84 E-value=8.7e-07 Score=87.94 Aligned_cols=95 Identities=17% Similarity=0.147 Sum_probs=69.1
Q ss_pred CCCcEEEecccC-cc---cccccCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCC
Q psy11555 302 KIDKILLKSWAP-QR---DILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD 373 (484)
Q Consensus 302 ~~~nv~~~~~~p-q~---~ll~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~ 373 (484)
...++.+.+|++ +. +++ ..+++++... ..+++.||+++|+|+|+....+ ....+.+.+.|..++..
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~--~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~----~~e~~~~~~~g~~~~~~ 315 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIY--SAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGG----IPDIVDHGVTGYLAKPG 315 (365)
T ss_pred CCCceEecCCcCCHHHHHHHH--HhCCEEEeccccccccHHHHHHHhcCCCEEEecCCC----ChhheeCCCceEEeCCC
Confidence 567899999998 43 345 6788888753 3478999999999999876533 23344455678888654
Q ss_pred CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy11555 374 QITEETVLVALRTVLGNPSYKKRAEKVARLF 404 (484)
Q Consensus 374 ~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~ 404 (484)
+.+++.+++.++++|++.++++.+-+...
T Consensus 316 --~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 316 --DPEDLAEGIEWLLADPDEREELGEAAREL 344 (365)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 78999999999999887665555555444
No 71
>PLN00142 sucrose synthase
Probab=98.84 E-value=1.8e-06 Score=91.92 Aligned_cols=157 Identities=10% Similarity=0.018 Sum_probs=93.6
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecC-CC-----C---------------CCCCCcEEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEG-EN-----M---------------SGKIDKILLK 309 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~-~~-----~---------------~~~~~nv~~~ 309 (484)
..++++.|.. .+.+.+..+++|+++.+ .+++...++ +. . .++.++|.+.
T Consensus 573 kpvIl~VGRL-----~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~fl 647 (815)
T PLN00142 573 KPIIFSMARL-----DRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWI 647 (815)
T ss_pred CcEEEEEecC-----cccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEc
Confidence 4577888887 34555677777776442 345544443 10 0 1134667766
Q ss_pred cccC----ccccccc-C-ceeEEEec---CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHH
Q psy11555 310 SWAP----QRDILDH-P-NVKVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 379 (484)
Q Consensus 310 ~~~p----q~~ll~h-~-~~~~~Ith---gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 379 (484)
+..+ ..++... . .+++|+.- -| ..++.||+++|+|+|+....+ ....+++...|..+++. +.++
T Consensus 648 G~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG~tG~LV~P~--D~ea 721 (815)
T PLN00142 648 AAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDGVSGFHIDPY--HGDE 721 (815)
T ss_pred CCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCCC--CHHH
Confidence 5432 2333311 1 34677754 23 348999999999999976544 55566666789999876 6788
Q ss_pred HHHHHHH----HhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 380 VLVALRT----VLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 380 l~~ai~~----~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++++|.+ +++|++.++++.+-+.....+..+- +..+.-++.++.
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSW-e~~A~rll~L~~ 769 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTW-KIYAERLLTLGG 769 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHh
Confidence 8888765 4578888888777654432222443 333333444443
No 72
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.84 E-value=3.3e-07 Score=91.41 Aligned_cols=151 Identities=14% Similarity=0.151 Sum_probs=96.9
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCC-C-------CCCCCCcEEEecccCccccc-ccC
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGE-N-------MSGKIDKILLKSWAPQRDIL-DHP 321 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~-~-------~~~~~~nv~~~~~~pq~~ll-~h~ 321 (484)
..++++.+-.. ...+.+..+++++.++ +.++++..+++ . .....+++++.+.+++.+.+ ...
T Consensus 198 ~~vl~~~hr~~----~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 273 (365)
T TIGR00236 198 RYILLTLHRRE----NVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAA 273 (365)
T ss_pred CEEEEecCchh----hhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHH
Confidence 45665554321 1124466777776554 24666654431 1 01234689998877765433 126
Q ss_pred ceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy11555 322 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~ 401 (484)
.++++|+..|. .+.||+++|+|+|.++-.+++. .+.+.|.|..+. . ++++|.+++.++++|++.++++.+..
T Consensus 274 ~ad~vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~----e~~~~g~~~lv~-~--d~~~i~~ai~~ll~~~~~~~~~~~~~ 345 (365)
T TIGR00236 274 NSHLILTDSGG-VQEEAPSLGKPVLVLRDTTERP----ETVEAGTNKLVG-T--DKENITKAAKRLLTDPDEYKKMSNAS 345 (365)
T ss_pred hCCEEEECChh-HHHHHHHcCCCEEECCCCCCCh----HHHhcCceEEeC-C--CHHHHHHHHHHHHhChHHHHHhhhcC
Confidence 78899997764 4799999999999987655543 234467777764 2 78999999999999998888776555
Q ss_pred HHHhCCCCChHHHHHHHHH
Q psy11555 402 RLFQDRPMPPLDTAIYWIE 420 (484)
Q Consensus 402 ~~~~~~~~~~~~~~~~~ie 420 (484)
..+.+ .++.+++++.++
T Consensus 346 ~~~g~--~~a~~ri~~~l~ 362 (365)
T TIGR00236 346 NPYGD--GEASERIVEELL 362 (365)
T ss_pred CCCcC--chHHHHHHHHHH
Confidence 44433 355666666554
No 73
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.83 E-value=1.4e-06 Score=85.80 Aligned_cols=136 Identities=19% Similarity=0.262 Sum_probs=85.5
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCCC----------CCCCCCcEEEecccCcc-cc
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGEN----------MSGKIDKILLKSWAPQR-DI 317 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~----------~~~~~~nv~~~~~~pq~-~l 317 (484)
++..+++.+|+... .+..+.+++++..+ +.++++...+.. ..+..+++.+.+...+. ++
T Consensus 191 ~~~~~i~~~G~~~~-----~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 265 (365)
T cd03807 191 EDTFLIGIVARLHP-----QKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPAL 265 (365)
T ss_pred CCCeEEEEecccch-----hcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHH
Confidence 34567778888743 33344555554432 235655543321 11245677777755432 44
Q ss_pred cccCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 318 LDHPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 318 l~h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
+ ..+++++..+. .+++.||+++|+|+|+....+ +...+.+ .|..++.+ +.+++.++|.++++|++.
T Consensus 266 ~--~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~----~~e~~~~--~g~~~~~~--~~~~l~~~i~~l~~~~~~ 335 (365)
T cd03807 266 L--NALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGD----NAELVGD--TGFLVPPG--DPEALAEAIEALLADPAL 335 (365)
T ss_pred H--HhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCC----hHHHhhc--CCEEeCCC--CHHHHHHHHHHHHhChHH
Confidence 4 67888886544 478999999999999865433 4455555 67777655 689999999999998765
Q ss_pred HHHHHHHHHHH
Q psy11555 394 KKRAEKVARLF 404 (484)
Q Consensus 394 ~~~a~~~~~~~ 404 (484)
++++.+.+...
T Consensus 336 ~~~~~~~~~~~ 346 (365)
T cd03807 336 RQALGEAARER 346 (365)
T ss_pred HHHHHHHHHHH
Confidence 55554444433
No 74
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.81 E-value=1.2e-06 Score=86.65 Aligned_cols=136 Identities=13% Similarity=0.228 Sum_probs=86.4
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCCCC---------CCCCCcEEEecccCc-cccc
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGENM---------SGKIDKILLKSWAPQ-RDIL 318 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~---------~~~~~nv~~~~~~pq-~~ll 318 (484)
++..+++..|+... .+....+++++.++ +.++++..++... .+..+|+.+.++..+ .+++
T Consensus 186 ~~~~~~l~~g~~~~-----~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 260 (360)
T cd04951 186 NDTFVILAVGRLVE-----AKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRDDIAAYY 260 (360)
T ss_pred CCCEEEEEEeeCch-----hcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccccHHHHH
Confidence 34677888888732 33344455554432 2466665544221 124578999987655 3455
Q ss_pred ccCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh-CCHHH
Q psy11555 319 DHPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL-GNPSY 393 (484)
Q Consensus 319 ~h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l-~~~~~ 393 (484)
..+++++.... .+++.||+++|+|+|+... ......+++ .|..+... +.+++.++|.+++ .++.+
T Consensus 261 --~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~--~g~~~~~~--~~~~~~~~i~~ll~~~~~~ 330 (360)
T cd04951 261 --NAADLFVLSSAWEGFGLVVAEAMACELPVVATDA----GGVREVVGD--SGLIVPIS--DPEALANKIDEILKMSGEE 330 (360)
T ss_pred --HhhceEEecccccCCChHHHHHHHcCCCEEEecC----CChhhEecC--CceEeCCC--CHHHHHHHHHHHHhCCHHH
Confidence 66778776432 5689999999999998543 334555555 45555544 7899999999998 45667
Q ss_pred HHHHHHHHHHH
Q psy11555 394 KKRAEKVARLF 404 (484)
Q Consensus 394 ~~~a~~~~~~~ 404 (484)
++.+.+..+..
T Consensus 331 ~~~~~~~~~~~ 341 (360)
T cd04951 331 RDIIGARRERI 341 (360)
T ss_pred HHHHHHHHHHH
Confidence 76666553333
No 75
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.81 E-value=1.1e-06 Score=88.86 Aligned_cols=124 Identities=14% Similarity=0.209 Sum_probs=77.5
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHh----cCCc-EEEEEecCCCC---------CCCCCcEEEecccCcccccc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIPQ-RVIWKWEGENM---------SGKIDKILLKSWAPQRDILD- 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~~~-~~i~~~~~~~~---------~~~~~nv~~~~~~pq~~ll~- 319 (484)
+..+++..|.... .+..+.+++++. ..+. ++++..++... .++.++|.+.+|+|+.++..
T Consensus 192 ~~~~i~~~grl~~-----~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~ 266 (398)
T cd03796 192 DKITIVVISRLVY-----RKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDV 266 (398)
T ss_pred CceEEEEEeccch-----hcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHH
Confidence 4577888887732 333444555543 3333 55555443211 12457899999998755332
Q ss_pred cCceeEEEecC---Cc-chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 320 HPNVKVFISHG---GF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 320 h~~~~~~Ithg---G~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
...+++++... |. .++.||+++|+|+|+.+..+ ....+. .|.+..... +.+++.+++.++++++
T Consensus 267 l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~-~~~~~~~~~---~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 267 LVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLP-PDMILLAEP---DVESIVRKLEEAISIL 334 (398)
T ss_pred HHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhee-CCceeecCC---CHHHHHHHHHHHHhCh
Confidence 16678887532 33 48999999999999977654 223343 344444432 6899999999999764
No 76
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.78 E-value=8.3e-07 Score=88.08 Aligned_cols=132 Identities=16% Similarity=0.240 Sum_probs=83.5
Q ss_pred EEEeecceeccCCCChHHHHHHHHHHhcCC--cEEEEEecCCC----------CCCCCCcEEEecccCcccccc-cCcee
Q psy11555 258 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGEN----------MSGKIDKILLKSWAPQRDILD-HPNVK 324 (484)
Q Consensus 258 v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~----------~~~~~~nv~~~~~~pq~~ll~-h~~~~ 324 (484)
.++..|+.. +.+....++++++++. .++++..+++. .....++|.+.+++|+.++.. ..+++
T Consensus 195 ~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 195 YYLLVGRIV-----PENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEEeccc-----ccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 345678873 3455667777777664 45555444311 123467999999999875432 14567
Q ss_pred EEEecCCc-----chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 325 VFISHGGF-----LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 325 ~~IthgG~-----~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
+++.++-. +++.||+++|+|+|+....+. ...++. .|..++.. + .+.++|.++++|++.++++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~~--~g~~~~~~--~--~l~~~i~~l~~~~~~~~~~~~ 339 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLGD--KAIYFKVG--D--DLASLLEELEADPEEVSAMAK 339 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeecC--CeeEecCc--h--HHHHHHHHHHhCHHHHHHHHH
Confidence 77755432 469999999999999765431 122222 35555433 2 299999999999876666665
Q ss_pred HHHHH
Q psy11555 400 VARLF 404 (484)
Q Consensus 400 ~~~~~ 404 (484)
.+...
T Consensus 340 ~~~~~ 344 (363)
T cd04955 340 AARER 344 (363)
T ss_pred HHHHH
Confidence 55444
No 77
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.77 E-value=1e-06 Score=86.09 Aligned_cols=132 Identities=20% Similarity=0.337 Sum_probs=87.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC---------CCCCCCcEEEecccCcc-cccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN---------MSGKIDKILLKSWAPQR-DILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~-~ll~ 319 (484)
++.+++..|+.. +.+....+++++..+. .++++..++.. ..+..+++.+.++.++. +++
T Consensus 188 ~~~~i~~~g~~~-----~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~- 261 (353)
T cd03811 188 DGPVILAVGRLS-----PQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYL- 261 (353)
T ss_pred CceEEEEEecch-----hhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHH-
Confidence 467788888873 2344555666655543 34554433321 11246789999987653 445
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHH---HHHHHHHhCCHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV---LVALRTVLGNPS 392 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l---~~ai~~~l~~~~ 392 (484)
..++++|.. |..+++.||+++|+|+|+.... .....+.+.+.|..++.+ +.+.+ .+++.+++++++
T Consensus 262 -~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~~ 334 (353)
T cd03811 262 -KAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDGENGLLVPVG--DEAALAAAALALLDLLLDPE 334 (353)
T ss_pred -HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCCCceEEECCC--CHHHHHHHHHHHHhccCChH
Confidence 567777743 3356899999999999986554 456778888899999765 66676 677777777777
Q ss_pred HHHHHHH
Q psy11555 393 YKKRAEK 399 (484)
Q Consensus 393 ~~~~a~~ 399 (484)
.++++++
T Consensus 335 ~~~~~~~ 341 (353)
T cd03811 335 LRERLAA 341 (353)
T ss_pred HHHHHHH
Confidence 6666655
No 78
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.77 E-value=2.7e-07 Score=91.95 Aligned_cols=135 Identities=16% Similarity=0.161 Sum_probs=90.6
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcCCc---EEEEEecCC---CC----CCC---CCcEEEecccCcccccc-
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ---RVIWKWEGE---NM----SGK---IDKILLKSWAPQRDILD- 319 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~---~~i~~~~~~---~~----~~~---~~nv~~~~~~pq~~ll~- 319 (484)
+++.+++++|.... ..+.+.+..++++++.+.. .+++...+. .+ ... .+|+++.+..+..++..
T Consensus 197 ~~~~vlv~~~r~~~--~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l 274 (363)
T cd03786 197 PKKYILVTLHRVEN--VDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLL 274 (363)
T ss_pred CCCEEEEEeCCccc--cCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHH
Confidence 34677888777632 1145678888888876643 344332221 11 111 46888887765544322
Q ss_pred cCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 320 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 320 h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
...++++|+.+| +.+.||+++|+|+|+++...+ +....+.|++..+.. +.++|.++|.++++++..+++++
T Consensus 275 ~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~~~----~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~~~~~~~~ 345 (363)
T cd03786 275 LKNADLVLTDSG-GIQEEASFLGVPVLNLRDRTE----RPETVESGTNVLVGT---DPEAILAAIEKLLSDEFAYSLMS 345 (363)
T ss_pred HHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCCCc----cchhhheeeEEecCC---CHHHHHHHHHHHhcCchhhhcCC
Confidence 267999999999 778899999999999864322 445666787776642 58999999999998887666654
No 79
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.77 E-value=3.6e-06 Score=85.80 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=75.0
Q ss_pred CceeEEEec-----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 321 PNVKVFISH-----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 321 ~~~~~~Ith-----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..+++++.. ||..++.||+++|+|+|+-|..+++...+..+.+.|.++.. . +.++|.++|.++++|++.++
T Consensus 318 ~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~--~--d~~~La~~l~~ll~~~~~~~ 393 (425)
T PRK05749 318 AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV--E--DAEDLAKAVTYLLTDPDARQ 393 (425)
T ss_pred HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE--C--CHHHHHHHHHHHhcCHHHHH
Confidence 567774431 34456999999999999999988888888887777877664 3 68999999999999998888
Q ss_pred HHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 396 RAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 396 ~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
++.+.+.....+.....++.+..++..+
T Consensus 394 ~m~~~a~~~~~~~~~~~~~~~~~l~~~l 421 (425)
T PRK05749 394 AYGEAGVAFLKQNQGALQRTLQLLEPYL 421 (425)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHhc
Confidence 8887776665433466677766666543
No 80
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.77 E-value=1.3e-06 Score=85.66 Aligned_cols=145 Identities=14% Similarity=0.053 Sum_probs=89.5
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC-------CC---CCCcEEEecccCcccccc-cCceeE
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM-------SG---KIDKILLKSWAPQRDILD-HPNVKV 325 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~-------~~---~~~nv~~~~~~pq~~ll~-h~~~~~ 325 (484)
.+++..|... +.+....+++++++.+.++++...+... .. ..+++.+.+++++.++.. ...+++
T Consensus 172 ~~i~~~Gr~~-----~~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 172 DYLLFLGRIS-----PEKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CEEEEEEeec-----cccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 3455667773 2344566777777777777665544211 11 357999999999865321 156667
Q ss_pred EEec----CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHH
Q psy11555 326 FISH----GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 400 (484)
Q Consensus 326 ~Ith----gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~ 400 (484)
++.. -| ..++.||+++|+|+|+....+ ....+.+...|..++. .+++.++|.++++.+ ++++++.
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~~~~g~l~~~----~~~l~~~l~~l~~~~--~~~~~~~ 316 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVEDGVTGFLVDS----VEELAAAVARADRLD--RAACRRR 316 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeCCCcEEEeCC----HHHHHHHHHHHhccH--HHHHHHH
Confidence 7632 23 357999999999999876543 3344555457888853 899999999987543 2334333
Q ss_pred HHHHhCCCCChHHHHHHHHH
Q psy11555 401 ARLFQDRPMPPLDTAIYWIE 420 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~ie 420 (484)
.. + ..+....+..|++
T Consensus 317 ~~---~-~~s~~~~~~~~~~ 332 (335)
T cd03802 317 AE---R-RFSAARMVDDYLA 332 (335)
T ss_pred HH---H-hCCHHHHHHHHHH
Confidence 22 2 1454444545444
No 81
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.72 E-value=4.2e-06 Score=89.19 Aligned_cols=137 Identities=13% Similarity=0.140 Sum_probs=90.5
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC------C---------------CCCCCcEEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN------M---------------SGKIDKILLK 309 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~------~---------------~~~~~nv~~~ 309 (484)
..++++.|.. .+.+.+..+++|+.+.+ .+.+...++.. . .++.++|.+.
T Consensus 550 kpiIl~VGRL-----~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~fl 624 (784)
T TIGR02470 550 KPIIFSMARL-----DRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWI 624 (784)
T ss_pred CcEEEEEeCC-----CccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 4567788887 34566777888876542 24444443321 0 1235788888
Q ss_pred ccc-Cccc---cccc--CceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHH
Q psy11555 310 SWA-PQRD---ILDH--PNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 379 (484)
Q Consensus 310 ~~~-pq~~---ll~h--~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 379 (484)
++. +..+ ++.+ ..+++||.-. -..++.||+++|+|+|+....+ .+..+++...|..+++. ++++
T Consensus 625 G~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~dg~tGfLVdp~--D~ea 698 (784)
T TIGR02470 625 GAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQDGVSGFHIDPY--HGEE 698 (784)
T ss_pred cCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCCCcEEEeCCC--CHHH
Confidence 875 4332 3321 1345777542 2358999999999999965544 56667777889999876 7889
Q ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Q psy11555 380 VLVALRTVL----GNPSYKKRAEKVARL 403 (484)
Q Consensus 380 l~~ai~~~l----~~~~~~~~a~~~~~~ 403 (484)
++++|.+++ +|++.++++.+.+..
T Consensus 699 LA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 699 AAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 999998875 688888777766544
No 82
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.68 E-value=2.5e-06 Score=82.66 Aligned_cols=161 Identities=17% Similarity=0.141 Sum_probs=90.7
Q ss_pred hHHHhhhcCceEEEEeecceeccC-CCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCC--cEEEe-cccCcccccccC
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGK-SFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKID--KILLK-SWAPQRDILDHP 321 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~--nv~~~-~~~pq~~ll~h~ 321 (484)
..+-++..+++.|++=+.+..... ......+..+++.+++.+..++..-..+......+ ++.+. .-+.-.+++ .
T Consensus 170 vl~~lg~~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~Ll--~ 247 (335)
T PF04007_consen 170 VLKELGLDDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQRELFEKYGVIIPPEPVDGLDLL--Y 247 (335)
T ss_pred HHHHcCCCCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchhhHHhccCccccCCCCCHHHHH--H
Confidence 333344334567776665532212 12345567788888877765444332222111111 12222 223333688 6
Q ss_pred ceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy11555 322 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~ 401 (484)
.++++|+-|| ....||...|+|.|-+ +.++-...=+.+.+.|. ..... +.+++.+.+.+.+ ..+++.+...
T Consensus 248 ~a~l~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~Gl--l~~~~--~~~ei~~~v~~~~---~~~~~~~~~~ 318 (335)
T PF04007_consen 248 YADLVIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEKGL--LYHST--DPDEIVEYVRKNL---GKRKKIREKK 318 (335)
T ss_pred hcCEEEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHCCC--eEecC--CHHHHHHHHHHhh---hcccchhhhh
Confidence 7899999998 6889999999999975 22232233456777776 33222 6777777555433 3343333321
Q ss_pred HHHhCCCCChHHHHHHHHHHHH
Q psy11555 402 RLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 402 ~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
. .++.+..++-||.++
T Consensus 319 ----~--~d~~~~i~~~i~~~~ 334 (335)
T PF04007_consen 319 ----S--EDPTDLIIEEIEEYI 334 (335)
T ss_pred ----c--cCHHHHHHHHHHHhh
Confidence 1 478888888888764
No 83
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.67 E-value=7.4e-07 Score=88.19 Aligned_cols=146 Identities=16% Similarity=0.214 Sum_probs=91.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC----------CCCCCCcEEEecccCcccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN----------MSGKIDKILLKSWAPQRDILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~----------~~~~~~nv~~~~~~pq~~ll~ 319 (484)
+..+++..|+... .+....+++++..+. .++++...+.. .....+++++.+++|+.++..
T Consensus 194 ~~~~i~~~G~~~~-----~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (365)
T cd03809 194 PRPYFLYVGTIEP-----RKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAA 268 (365)
T ss_pred CCCeEEEeCCCcc-----ccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHH
Confidence 4566777888732 333445555554443 24444433221 123578999999998865321
Q ss_pred -cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHH
Q psy11555 320 -HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 394 (484)
Q Consensus 320 -h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 394 (484)
...+++++.. |..+++.||+++|+|+|+....+ ....+. ..|..++.. +.+++.++|.++++|+..+
T Consensus 269 ~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~--~~~~~~~~~--~~~~~~~~i~~l~~~~~~~ 340 (365)
T cd03809 269 LYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAG--DAALYFDPL--DPEALAAAIERLLEDPALR 340 (365)
T ss_pred HHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceec--CceeeeCCC--CHHHHHHHHHHHhcCHHHH
Confidence 1456666633 33468999999999999965532 111121 346666555 7899999999999999988
Q ss_pred HHHHHHHHHHhCCCCChHHH
Q psy11555 395 KRAEKVARLFQDRPMPPLDT 414 (484)
Q Consensus 395 ~~a~~~~~~~~~~~~~~~~~ 414 (484)
.++.+.+.....+ .+....
T Consensus 341 ~~~~~~~~~~~~~-~sw~~~ 359 (365)
T cd03809 341 EELRERGLARAKR-FSWEKT 359 (365)
T ss_pred HHHHHHHHHHHHh-CCHHHH
Confidence 8887777654442 443333
No 84
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.65 E-value=1e-05 Score=81.34 Aligned_cols=156 Identities=17% Similarity=0.188 Sum_probs=96.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC--cEEEEEecCCCCC-----------CC---CCcEEEe-cccCcccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENMS-----------GK---IDKILLK-SWAPQRDI 317 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~~-----------~~---~~nv~~~-~~~pq~~l 317 (484)
+.++++..|... +.+.++.++++++.+. .++++..++.... .. .+++.+. ++++..++
T Consensus 200 ~~~~i~~~Grl~-----~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 200 SRPYILFVGRIT-----RQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred CceEEEEEcccc-----cccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 355677788873 3455677777777663 3555544432111 11 2345543 56776543
Q ss_pred cc-cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCC----HHHHHHHHHHHh
Q psy11555 318 LD-HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT----EETVLVALRTVL 388 (484)
Q Consensus 318 l~-h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~----~~~l~~ai~~~l 388 (484)
.. ...+|+++.- |...++.||+++|+|+|+.... .....++..+.|..++..+.+ .+++.++|.+++
T Consensus 275 ~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~ 350 (388)
T TIGR02149 275 VELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL 350 (388)
T ss_pred HHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH
Confidence 21 1568888754 2245789999999999997654 355667777789998765332 288999999999
Q ss_pred CCHHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q psy11555 389 GNPSYKKRAEKVARLFQDRPMPPLDTAIYWI 419 (484)
Q Consensus 389 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~i 419 (484)
+|++.++++.+-+.....+..+....+..++
T Consensus 351 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 381 (388)
T TIGR02149 351 ADPELAKKMGIAGRKRAEEEFSWGSIAKKTV 381 (388)
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9988777666655543322245444443333
No 85
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.64 E-value=1e-05 Score=80.97 Aligned_cols=152 Identities=16% Similarity=0.173 Sum_probs=94.7
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCC--------------CCCCCCcEEEeccc--
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------------MSGKIDKILLKSWA-- 312 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~--------------~~~~~~nv~~~~~~-- 312 (484)
++..+++..|.... .+....+++++..+ + .++++..++.. ..+..+++.+.++.
T Consensus 188 ~~~~~i~~vgrl~~-----~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 262 (372)
T cd03792 188 PERPYITQVSRFDP-----WKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPV 262 (372)
T ss_pred CCCcEEEEEecccc-----ccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCC
Confidence 34567778888743 33344444444322 3 35665554421 01245678888876
Q ss_pred Cccc---ccccCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH
Q psy11555 313 PQRD---ILDHPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALR 385 (484)
Q Consensus 313 pq~~---ll~h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~ 385 (484)
++.+ ++ ..+++|+.... ..++.||+++|+|+|+....+ ....+.+.+.|..++ +.+.+.++|.
T Consensus 263 ~~~~~~~~~--~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~~~g~~~~----~~~~~a~~i~ 332 (372)
T cd03792 263 SDLEVNALQ--RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDGETGFLVD----TVEEAAVRIL 332 (372)
T ss_pred CHHHHHHHH--HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccCCceEEeC----CcHHHHHHHH
Confidence 4433 34 67888885432 358999999999999976543 334566667788765 4567888999
Q ss_pred HHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy11555 386 TVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIE 420 (484)
Q Consensus 386 ~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie 420 (484)
++++|++.++.+.+.+.....+..+....+..|++
T Consensus 333 ~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~ 367 (372)
T cd03792 333 YLLRDPELRRKMGANAREHVRENFLITRHLKDYLY 367 (372)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999988887777666543222554444444443
No 86
>PRK00654 glgA glycogen synthase; Provisional
Probab=98.63 E-value=5.7e-06 Score=85.31 Aligned_cols=130 Identities=16% Similarity=0.172 Sum_probs=80.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC-----C----CCCCCcEEE-ecccCcc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKILL-KSWAPQR---DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~-----~----~~~~~nv~~-~~~~pq~---~ll 318 (484)
+.++++..|... +.+.+..+++++.++ +.++++..+++. + ...+.++.+ .++ +.. .++
T Consensus 281 ~~~~i~~vGRl~-----~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~-~~~~~~~~~ 354 (466)
T PRK00654 281 DAPLFAMVSRLT-----EQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGY-DEALAHRIY 354 (466)
T ss_pred CCcEEEEeeccc-----cccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeC-CHHHHHHHH
Confidence 456777888873 345566666666543 456666654421 1 123556654 455 322 344
Q ss_pred ccCceeEEEecC---Cc-chHHHHHhcCCceeeccCCCchHHHHHHHHH------cCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 319 DHPNVKVFISHG---GF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEK------AGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 319 ~h~~~~~~Ithg---G~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~------~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
..+++++... |. .+.+||+++|+|+|+....+ ....+.. .+.|..++.. ++++|.++|.+++
T Consensus 355 --~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG----~~e~v~~~~~~~~~~~G~lv~~~--d~~~la~~i~~~l 426 (466)
T PRK00654 355 --AGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGG----LADTVIDYNPEDGEATGFVFDDF--NAEDLLRALRRAL 426 (466)
T ss_pred --hhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCC----ccceeecCCCCCCCCceEEeCCC--CHHHHHHHHHHHH
Confidence 6788888542 32 48999999999999875432 1122222 3789999766 7899999999988
Q ss_pred C---CHHHHHHHH
Q psy11555 389 G---NPSYKKRAE 398 (484)
Q Consensus 389 ~---~~~~~~~a~ 398 (484)
+ ++..++++.
T Consensus 427 ~~~~~~~~~~~~~ 439 (466)
T PRK00654 427 ELYRQPPLWRALQ 439 (466)
T ss_pred HHhcCHHHHHHHH
Confidence 5 444444333
No 87
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.60 E-value=8.1e-06 Score=82.90 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCCcEEEecccCcccccc-cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHH---HcCcEEEecCC
Q psy11555 302 KIDKILLKSWAPQRDILD-HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE---KAGFGVTLPYD 373 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~ll~-h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~---~~G~g~~l~~~ 373 (484)
+.++|.+.+++|+.++.. ...++++++. |-..++.|||++|+|+|+....+.- ...++ ..+.|...+
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~---~~iv~~~~~g~~G~l~~-- 377 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPL---LDIVVPWDGGPTGFLAS-- 377 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCc---hheeeccCCCCceEEeC--
Confidence 457899999998765332 1567776632 2234899999999999986543311 11222 355787752
Q ss_pred CCCHHHHHHHHHHHhCCHH-HHHHH
Q psy11555 374 QITEETVLVALRTVLGNPS-YKKRA 397 (484)
Q Consensus 374 ~~~~~~l~~ai~~~l~~~~-~~~~a 397 (484)
++++++++|.++++++. .++.+
T Consensus 378 --d~~~la~ai~~ll~~~~~~~~~~ 400 (419)
T cd03806 378 --TAEEYAEAIEKILSLSEEERLRI 400 (419)
T ss_pred --CHHHHHHHHHHHHhCCHHHHHHH
Confidence 78999999999998653 44433
No 88
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.59 E-value=2.6e-06 Score=86.09 Aligned_cols=118 Identities=16% Similarity=0.114 Sum_probs=73.4
Q ss_pred EEEeecceeccCCCChHHHHHHHHHHhcC----Cc-EEEEEecCCCCC-------CCCCcE-EEecccCcccccccCcee
Q psy11555 258 IYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQ-RVIWKWEGENMS-------GKIDKI-LLKSWAPQRDILDHPNVK 324 (484)
Q Consensus 258 v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~~-~~i~~~~~~~~~-------~~~~nv-~~~~~~pq~~ll~h~~~~ 324 (484)
+++..|... .++.+..++++++.+ +. ++++..+|+... +.+-++ .+.++.+..+++ ..+|
T Consensus 230 ~~l~vGRL~-----~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~~~~~~~~--~~~D 302 (462)
T PLN02846 230 GAYYIGKMV-----WSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGRDHADPLF--HDYK 302 (462)
T ss_pred EEEEEecCc-----ccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCCCCHHHHH--HhCC
Confidence 456677773 355566667766543 32 445444443211 112122 245555445566 5678
Q ss_pred EEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 325 VFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 325 ~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
+||.-+ -.+++.||+++|+|+|+....+ + ..+.+.+.|...+ +.+++.+++.++|+++
T Consensus 303 vFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~~ng~~~~----~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 303 VFLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQFPNCRTYD----DGKGFVRATLKALAEE 364 (462)
T ss_pred EEEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecCCceEecC----CHHHHHHHHHHHHccC
Confidence 998663 3468999999999999975443 2 4455566666662 6889999999999754
No 89
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=98.54 E-value=6.8e-06 Score=85.02 Aligned_cols=134 Identities=15% Similarity=0.111 Sum_probs=86.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCC-CC--------CCCCCcEEEecccCccc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGE-NM--------SGKIDKILLKSWAPQRD---ILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~-~~--------~~~~~nv~~~~~~pq~~---ll~ 319 (484)
+.++++..|... +.+.++.+++++.++ +.++++..+++ .. ...+.++.+....++.. ++
T Consensus 290 ~~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~- 363 (473)
T TIGR02095 290 DVPLFGVISRLT-----QQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIY- 363 (473)
T ss_pred CCCEEEEEecCc-----cccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH-
Confidence 456777888884 344455666665544 34666655442 11 12456777766666543 44
Q ss_pred cCceeEEEecC---Cc-chHHHHHhcCCceeeccCCCchHHHHHHHHHc------CcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 320 HPNVKVFISHG---GF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKA------GFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 320 h~~~~~~Ithg---G~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~------G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
..+++++.-. |. .+.+||+++|+|+|+....+ ....+.+. +.|..++.. +++++.++|.+++.
T Consensus 364 -~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~~~--d~~~la~~i~~~l~ 436 (473)
T TIGR02095 364 -AGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFEEY--DPGALLAALSRALR 436 (473)
T ss_pred -HhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeCCC--CHHHHHHHHHHHHH
Confidence 6788888543 22 47899999999999876543 22233333 789998765 78999999999887
Q ss_pred ----CHHHHHHHHHHH
Q psy11555 390 ----NPSYKKRAEKVA 401 (484)
Q Consensus 390 ----~~~~~~~a~~~~ 401 (484)
|++.++++.+-+
T Consensus 437 ~~~~~~~~~~~~~~~~ 452 (473)
T TIGR02095 437 LYRQDPSLWEALQKNA 452 (473)
T ss_pred HHhcCHHHHHHHHHHH
Confidence 776665555433
No 90
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.51 E-value=7.7e-06 Score=84.70 Aligned_cols=155 Identities=14% Similarity=0.089 Sum_probs=87.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC-----C----CCCCCcEEEecccCcc---cccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKILLKSWAPQR---DILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~-----~----~~~~~nv~~~~~~pq~---~ll~ 319 (484)
+.++++..|... +.+.+..+++++..+ +.++++...++. + ...++|+.+..-.++. .++
T Consensus 295 ~~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 368 (476)
T cd03791 295 DAPLFGFVGRLT-----EQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIY- 368 (476)
T ss_pred CCCEEEEEeecc-----ccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH-
Confidence 466778888874 344455566665543 346666554421 0 1135778765544433 233
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCC--chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
..+++++.. |-..+.+||+++|+|+|+....+ |.-.+.....+.|.|..++.. +.+++.++|.++++...-
T Consensus 369 -~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~--~~~~l~~~i~~~l~~~~~ 445 (476)
T cd03791 369 -AGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGY--NADALLAALRRALALYRD 445 (476)
T ss_pred -HhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCC--CHHHHHHHHHHHHHHHcC
Confidence 678888854 22247899999999999876543 211111111134589999765 789999999998852211
Q ss_pred HHHHHHHHHHHhCCCCChHHHHHHH
Q psy11555 394 KKRAEKVARLFQDRPMPPLDTAIYW 418 (484)
Q Consensus 394 ~~~a~~~~~~~~~~~~~~~~~~~~~ 418 (484)
++..+++++....+..+-...+..+
T Consensus 446 ~~~~~~~~~~~~~~~fsw~~~a~~~ 470 (476)
T cd03791 446 PEAWRKLQRNAMAQDFSWDRSAKEY 470 (476)
T ss_pred HHHHHHHHHHHhccCCChHHHHHHH
Confidence 2333333333333334444444333
No 91
>KOG3349|consensus
Probab=98.50 E-value=5.7e-07 Score=73.84 Aligned_cols=117 Identities=15% Similarity=0.215 Sum_probs=82.2
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCc-EEEEEecCCC-CCC-------CCCcEEE--ecccCc-ccccccCce
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN-MSG-------KIDKILL--KSWAPQ-RDILDHPNV 323 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~-~~i~~~~~~~-~~~-------~~~nv~~--~~~~pq-~~ll~h~~~ 323 (484)
..+||+.||.....-...-..+.+++.+.+.+. +.|...|.+. ..+ ....+.+ ..|-|. .+.. ..+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I--~~A 81 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDI--RSA 81 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHH--hhc
Confidence 579999999843111111223445667777886 7888888642 111 1233333 455665 3334 359
Q ss_pred eEEEecCCcchHHHHHhcCCceeeccC----CCchHHHHHHHHHcCcEEEecCCC
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGIPM----FGDQKANIRVVEKAGFGVTLPYDQ 374 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~P~----~~dQ~~na~~~~~~G~g~~l~~~~ 374 (484)
+++|+|+|.||++|.+..|+|.|+++- -..|..-|..+++.|.=....+.+
T Consensus 82 dlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~ 136 (170)
T KOG3349|consen 82 DLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPST 136 (170)
T ss_pred cEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccc
Confidence 999999999999999999999999983 468999999999999988876554
No 92
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.47 E-value=7.4e-06 Score=84.88 Aligned_cols=116 Identities=16% Similarity=0.071 Sum_probs=70.4
Q ss_pred CChHHHHHHHHHHhcC----Cc-EEEEEecCCCCC-------CCCCcEEEecccCcc-cccccCceeEEEecC----Ccc
Q psy11555 271 FPSDKRKAFLRAFEQI----PQ-RVIWKWEGENMS-------GKIDKILLKSWAPQR-DILDHPNVKVFISHG----GFL 333 (484)
Q Consensus 271 ~~~~~~~~~~~a~~~~----~~-~~i~~~~~~~~~-------~~~~nv~~~~~~pq~-~ll~h~~~~~~Ithg----G~~ 333 (484)
.+++.+..++++++.+ +. ++++..+|+... +..-++.+.++.++. +++ ..+++||.-+ -.+
T Consensus 556 a~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~ly--asaDVFVlPS~sEgFGl 633 (794)
T PLN02501 556 VWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSL--HGYKVFINPSISDVLCT 633 (794)
T ss_pred cccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHH--HhCCEEEECCCcccchH
Confidence 3456666777776543 22 444443332211 122246666766654 356 6788887543 246
Q ss_pred hHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHH
Q psy11555 334 GTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 397 (484)
Q Consensus 334 s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a 397 (484)
++.||+++|+|+|+....+... +...+.|... . +.+++.++|.++|+|+..+..+
T Consensus 634 VlLEAMA~GlPVVATd~pG~e~-----V~~g~nGll~--~--D~EafAeAI~~LLsd~~~rl~~ 688 (794)
T PLN02501 634 ATAEALAMGKFVVCADHPSNEF-----FRSFPNCLTY--K--TSEDFVAKVKEALANEPQPLTP 688 (794)
T ss_pred HHHHHHHcCCCEEEecCCCCce-----EeecCCeEec--C--CHHHHHHHHHHHHhCchhhhHH
Confidence 7999999999999987655321 2223344333 3 6899999999999887644333
No 93
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.42 E-value=3.7e-05 Score=74.89 Aligned_cols=89 Identities=16% Similarity=0.176 Sum_probs=72.6
Q ss_pred EecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy11555 327 ISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD 406 (484)
Q Consensus 327 IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~ 406 (484)
+-+||+| ..|++++|+|+|.=|....|..-++++.+.|.|+.++ +.+.+.+++..+++|+..++++.+-+..+-.
T Consensus 328 v~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~----~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 328 VPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE----DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred cCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC----CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 4588885 7899999999999999999999999999999999996 3788999999999888888888777666655
Q ss_pred CCCChHHHHHHHHH
Q psy11555 407 RPMPPLDTAIYWIE 420 (484)
Q Consensus 407 ~~~~~~~~~~~~ie 420 (484)
+-....++....++
T Consensus 403 ~~~gal~r~l~~l~ 416 (419)
T COG1519 403 QNRGALARTLEALK 416 (419)
T ss_pred HhhHHHHHHHHHhh
Confidence 43455555554443
No 94
>PLN02275 transferase, transferring glycosyl groups
Probab=98.41 E-value=2.5e-05 Score=78.11 Aligned_cols=77 Identities=12% Similarity=0.176 Sum_probs=56.2
Q ss_pred CcEEEec-ccCcccccc-cCceeEEEec------CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCC
Q psy11555 304 DKILLKS-WAPQRDILD-HPNVKVFISH------GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQ 374 (484)
Q Consensus 304 ~nv~~~~-~~pq~~ll~-h~~~~~~Ith------gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~ 374 (484)
+|+.+.+ |+|..++-. ...+|+++.. -| -+++.||+++|+|+|+....+ ..+.+++.+.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg----~~eiv~~g~~G~lv~--- 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IGELVKDGKNGLLFS--- 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCC----hHHHccCCCCeEEEC---
Confidence 4577655 788766532 2778898841 12 246999999999999975433 667777778999985
Q ss_pred CCHHHHHHHHHHHh
Q psy11555 375 ITEETVLVALRTVL 388 (484)
Q Consensus 375 ~~~~~l~~ai~~~l 388 (484)
+.+++.++|.++|
T Consensus 359 -~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -SSSELADQLLELL 371 (371)
T ss_pred -CHHHHHHHHHHhC
Confidence 4789999998875
No 95
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.41 E-value=2.5e-06 Score=86.27 Aligned_cols=156 Identities=15% Similarity=0.146 Sum_probs=101.2
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC---------CCCCCCcEEEecccCcccccc-c
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN---------MSGKIDKILLKSWAPQRDILD-H 320 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~~ll~-h 320 (484)
+..+++.|... +.+.+..++++++.+. .++.+..+++. ..++.++|.+.+|+|+.++.. .
T Consensus 222 ~~~il~vGrl~-----~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l 296 (406)
T PRK15427 222 PLEIISVARLT-----EKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAML 296 (406)
T ss_pred CeEEEEEeCcc-----hhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHH
Confidence 45677778873 3444555666655432 24555444421 112467899999999876432 2
Q ss_pred CceeEEEec---------CCc-chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC-
Q psy11555 321 PNVKVFISH---------GGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG- 389 (484)
Q Consensus 321 ~~~~~~Ith---------gG~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~- 389 (484)
..+++||.. -|. ++++||+++|+|+|+....+ ....+++...|..++.. +.+++.++|.++++
T Consensus 297 ~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~~~G~lv~~~--d~~~la~ai~~l~~~ 370 (406)
T PRK15427 297 DDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEADKSGWLVPEN--DAQALAQRLAAFSQL 370 (406)
T ss_pred HhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCCCceEEeCCC--CHHHHHHHHHHHHhC
Confidence 678888853 233 56899999999999976543 44556666789999766 78999999999999
Q ss_pred CHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 390 NPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 390 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
|++.++++.+-++....+..+. +..+..++.++
T Consensus 371 d~~~~~~~~~~ar~~v~~~f~~-~~~~~~l~~~~ 403 (406)
T PRK15427 371 DTDELAPVVKRAREKVETDFNQ-QVINRELASLL 403 (406)
T ss_pred CHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHH
Confidence 8887766666655443332453 44444444443
No 96
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.38 E-value=4.5e-05 Score=78.86 Aligned_cols=137 Identities=20% Similarity=0.300 Sum_probs=87.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHh----cCCc-EEEEEecCCCC-------------CCCCCcEEEecccCccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIPQ-RVIWKWEGENM-------------SGKIDKILLKSWAPQRD 316 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~~~-~~i~~~~~~~~-------------~~~~~nv~~~~~~pq~~ 316 (484)
++.+++..|.... .+.++.++++++ +.+. ++++..+++.. .++.+||.+.+...-.+
T Consensus 292 ~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~ 366 (475)
T cd03813 292 EPPVVGLIGRVVP-----IKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKE 366 (475)
T ss_pred CCcEEEEEecccc-----ccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHH
Confidence 3567777788742 333444555543 3333 44433322111 12457888888433345
Q ss_pred ccccCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc------CcEEEecCCCCCHHHHHHHHHH
Q psy11555 317 ILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA------GFGVTLPYDQITEETVLVALRT 386 (484)
Q Consensus 317 ll~h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~------G~g~~l~~~~~~~~~l~~ai~~ 386 (484)
++ .++++++.. |--+++.||+++|+|+|+.... .....+.+. ..|..++.. +.+++.++|.+
T Consensus 367 ~l--~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g----~~~elv~~~~~~~~g~~G~lv~~~--d~~~la~ai~~ 438 (475)
T cd03813 367 YL--PKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVG----SCRELIEGADDEALGPAGEVVPPA--DPEALARAILR 438 (475)
T ss_pred HH--HhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCC----ChHHHhcCCcccccCCceEEECCC--CHHHHHHHHHH
Confidence 55 567777744 3346899999999999995443 344455552 378888765 78999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q psy11555 387 VLGNPSYKKRAEKVARLF 404 (484)
Q Consensus 387 ~l~~~~~~~~a~~~~~~~ 404 (484)
+++|++.++++.+.+...
T Consensus 439 ll~~~~~~~~~~~~a~~~ 456 (475)
T cd03813 439 LLKDPELRRAMGEAGRKR 456 (475)
T ss_pred HhcCHHHHHHHHHHHHHH
Confidence 999998777776665543
No 97
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=98.37 E-value=2e-06 Score=75.87 Aligned_cols=141 Identities=21% Similarity=0.337 Sum_probs=97.3
Q ss_pred hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEec-CCC---------CCCCCCcEEEecccCc
Q psy11555 250 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWE-GEN---------MSGKIDKILLKSWAPQ 314 (484)
Q Consensus 250 l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~-~~~---------~~~~~~nv~~~~~~pq 314 (484)
....+++.++++.|+.. +.+....+++++..+ +.-.++.+| +.. .....+++.+.++.++
T Consensus 9 ~~~~~~~~~il~~g~~~-----~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 83 (172)
T PF00534_consen 9 LKIPDKKKIILFIGRLD-----PEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPD 83 (172)
T ss_dssp TTT-TTSEEEEEESESS-----GGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSH
T ss_pred cCCCCCCeEEEEEecCc-----cccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccccccccccccccccccccccccc
Confidence 33344678888888883 345566666666543 333344444 211 1235679999999983
Q ss_pred c---cccccCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHH
Q psy11555 315 R---DILDHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 387 (484)
Q Consensus 315 ~---~ll~h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~ 387 (484)
. +++ ..++++++. |+.+++.||+++|+|+|+. +...+...+.+.+.|..++.. +.+++.++|.++
T Consensus 84 ~~l~~~~--~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~~~g~~~~~~--~~~~l~~~i~~~ 155 (172)
T PF00534_consen 84 DELDELY--KSSDIFVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDGVNGFLFDPN--DIEELADAIEKL 155 (172)
T ss_dssp HHHHHHH--HHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTTTSEEEESTT--SHHHHHHHHHHH
T ss_pred ccccccc--ccceeccccccccccccccccccccccceeec----cccCCceeeccccceEEeCCC--CHHHHHHHHHHH
Confidence 3 344 567888876 5566899999999999984 344566777777889999766 899999999999
Q ss_pred hCCHHHHHHHHHHHHH
Q psy11555 388 LGNPSYKKRAEKVARL 403 (484)
Q Consensus 388 l~~~~~~~~a~~~~~~ 403 (484)
+++++.++++.+-+++
T Consensus 156 l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 156 LNDPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHhcC
Confidence 9999888888776653
No 98
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.32 E-value=2.5e-05 Score=78.29 Aligned_cols=156 Identities=14% Similarity=0.223 Sum_probs=94.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhc----CCc-EEEEEecCCCC----------------CCCCCcEEEecccC
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IPQ-RVIWKWEGENM----------------SGKIDKILLKSWAP 313 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~----~~~-~~i~~~~~~~~----------------~~~~~nv~~~~~~p 313 (484)
+..+++..|.... .+.+..+++|+.. .+. ++++..++... .....++.+.+++|
T Consensus 192 ~~~~il~~Grl~~-----~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~ 266 (380)
T PRK15484 192 DETVLLYAGRISP-----DKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQP 266 (380)
T ss_pred CCeEEEEeccCcc-----ccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCC
Confidence 3566677788732 3434445555443 333 55554433210 12356889999998
Q ss_pred cccccc-cCceeEEEecC----C-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEe-cCCCCCHHHHHHHHHH
Q psy11555 314 QRDILD-HPNVKVFISHG----G-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTL-PYDQITEETVLVALRT 386 (484)
Q Consensus 314 q~~ll~-h~~~~~~Ithg----G-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l-~~~~~~~~~l~~ai~~ 386 (484)
+.++.. ...++++|... | ..++.||+++|+|+|+....+ +...+++...|..+ ++. +.+++.++|.+
T Consensus 267 ~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~~~G~~l~~~~--d~~~la~~I~~ 340 (380)
T PRK15484 267 PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEGITGYHLAEPM--TSDSIISDINR 340 (380)
T ss_pred HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccCCceEEEeCCC--CHHHHHHHHHH
Confidence 655421 16788888543 2 257899999999999976543 45566666788754 444 78999999999
Q ss_pred HhCCHHHHHHHHHHHH-HHhCCCCChHHHHHHHHHHHHH
Q psy11555 387 VLGNPSYKKRAEKVAR-LFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 387 ~l~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+++|++.++ +.+-++ ...++ .+ .+..+.-.+.+++
T Consensus 341 ll~d~~~~~-~~~~ar~~~~~~-fs-w~~~a~~~~~~l~ 376 (380)
T PRK15484 341 TLADPELTQ-IAEQAKDFVFSK-YS-WEGVTQRFEEQIH 376 (380)
T ss_pred HHcCHHHHH-HHHHHHHHHHHh-CC-HHHHHHHHHHHHH
Confidence 999987643 333333 22222 34 4444554555544
No 99
>PLN02316 synthase/transferase
Probab=98.30 E-value=0.00012 Score=80.28 Aligned_cols=139 Identities=10% Similarity=-0.022 Sum_probs=81.8
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC---------CC-----CCCCcEEEecccCcc---
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN---------MS-----GKIDKILLKSWAPQR--- 315 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~---------~~-----~~~~nv~~~~~~pq~--- 315 (484)
.+++...|... +++.+..+++|+..+ +.+++...++.. +. ..+++|.+....+..
T Consensus 840 ~plVg~VGRL~-----~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah 914 (1036)
T PLN02316 840 LPLVGIITRLT-----HQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSH 914 (1036)
T ss_pred CeEEEEEeccc-----cccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHH
Confidence 45666777773 345555666665543 456666544321 00 125678776555443
Q ss_pred cccccCceeEEEecC----CcchHHHHHhcCCceeeccCCC--chHHH-------HHHHHHcCcEEEecCCCCCHHHHHH
Q psy11555 316 DILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFG--DQKAN-------IRVVEKAGFGVTLPYDQITEETVLV 382 (484)
Q Consensus 316 ~ll~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~--dQ~~n-------a~~~~~~G~g~~l~~~~~~~~~l~~ 382 (484)
.++ ..+|+|+... =..+.+|||++|+|.|+....+ |.... ++..-..+.|..++.. +++.|..
T Consensus 915 ~iy--aaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~--d~~aLa~ 990 (1036)
T PLN02316 915 LIY--AGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA--DAAGVDY 990 (1036)
T ss_pred HHH--HhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC--CHHHHHH
Confidence 344 7889998543 1358999999999999865543 21111 1100113579898755 7899999
Q ss_pred HHHHHhCC-HHHHHHHHHHHHH
Q psy11555 383 ALRTVLGN-PSYKKRAEKVARL 403 (484)
Q Consensus 383 ai~~~l~~-~~~~~~a~~~~~~ 403 (484)
+|.+++.+ ...++.+.++++.
T Consensus 991 AL~raL~~~~~~~~~~~~~~r~ 1012 (1036)
T PLN02316 991 ALNRAISAWYDGRDWFNSLCKR 1012 (1036)
T ss_pred HHHHHHhhhhhhHHHHHHHHHH
Confidence 99999865 2333443444433
No 100
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.30 E-value=1.3e-05 Score=81.12 Aligned_cols=140 Identities=16% Similarity=0.274 Sum_probs=92.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEE-ecC-CC---------CCCCCCcEEEecccCccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWK-WEG-EN---------MSGKIDKILLKSWAPQRDIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~-~~~-~~---------~~~~~~nv~~~~~~pq~~ll 318 (484)
++..+++.|.... .+.+..+++++.++ + .++.|. .|+ .. .....++|.+.+|+++.++.
T Consensus 229 ~~~~il~~Grl~~-----~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~ 303 (407)
T cd04946 229 DTLRIVSCSYLVP-----VKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVY 303 (407)
T ss_pred CCEEEEEeecccc-----ccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHH
Confidence 3566777888743 33345555555443 2 245553 232 11 11234679999999987644
Q ss_pred ---ccCceeEEEecCC----cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 319 ---DHPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 319 ---~h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
....+++|+...- .++++||+++|+|+|+....+ ....+.+.+.|..++. .-+.+++.++|.++++|+
T Consensus 304 ~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~~~G~l~~~-~~~~~~la~~I~~ll~~~ 378 (407)
T cd04946 304 KLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNGGNGLLLSK-DPTPNELVSSLSKFIDNE 378 (407)
T ss_pred HHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCCCcEEEeCC-CCCHHHHHHHHHHHHhCH
Confidence 3345677875442 457999999999999865544 5566666668988864 236899999999999998
Q ss_pred HHHHHHHHHHHHH
Q psy11555 392 SYKKRAEKVARLF 404 (484)
Q Consensus 392 ~~~~~a~~~~~~~ 404 (484)
+.++++++-+...
T Consensus 379 ~~~~~m~~~ar~~ 391 (407)
T cd04946 379 EEYQTMREKAREK 391 (407)
T ss_pred HHHHHHHHHHHHH
Confidence 8777776665544
No 101
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.28 E-value=0.00054 Score=69.23 Aligned_cols=117 Identities=11% Similarity=0.113 Sum_probs=71.9
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCcE-EEEEecCCCCCCCCCcEEEecccCc-ccccc-cCceeEEEecC---
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQR-VIWKWEGENMSGKIDKILLKSWAPQ-RDILD-HPNVKVFISHG--- 330 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~-~i~~~~~~~~~~~~~nv~~~~~~pq-~~ll~-h~~~~~~Ithg--- 330 (484)
.++++.|.... .+.+....+++|+..++.. -++..|... ...++++...++... .++.. ...+|+||...
T Consensus 242 ~~il~v~~~~~---~~~Kg~~~li~A~~~l~~~~~L~ivG~g~-~~~~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~E 317 (405)
T PRK10125 242 PKIAVVAHDLR---YDGKTDQQLVREMMALGDKIELHTFGKFS-PFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVD 317 (405)
T ss_pred CEEEEEEeccc---cCCccHHHHHHHHHhCCCCeEEEEEcCCC-cccccceEEecCcCCHHHHHHHHHhCCEEEECCccc
Confidence 34445555321 2334457788888877543 234444322 223467777777643 22221 25678887543
Q ss_pred -CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q psy11555 331 -GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVAL 384 (484)
Q Consensus 331 -G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 384 (484)
--+++.||+++|+|+|+....+ ..+ +...+.|..+++. +.++|++++
T Consensus 318 gfp~vilEAmA~G~PVVat~~gG----~~E-iv~~~~G~lv~~~--d~~~La~~~ 365 (405)
T PRK10125 318 NYPLILCEALSIGVPVIATHSDA----ARE-VLQKSGGKTVSEE--EVLQLAQLS 365 (405)
T ss_pred cCcCHHHHHHHcCCCEEEeCCCC----hHH-hEeCCcEEEECCC--CHHHHHhcc
Confidence 3468999999999999988766 223 3334679999876 778888754
No 102
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.26 E-value=1.4e-05 Score=78.67 Aligned_cols=179 Identities=13% Similarity=0.227 Sum_probs=97.2
Q ss_pred ceEEEcccccCC---C-CCCccch--HHHhhhcCceEEEEeecceeccC-CCChHHHHHHHHHHhcC-CcEEEEEecCC-
Q psy11555 227 NVIEVAGLHVKS---P-QPLPNDI--KKFLDESVNGVIYFSMGSIIQGK-SFPSDKRKAFLRAFEQI-PQRVIWKWEGE- 297 (484)
Q Consensus 227 ~v~~vG~~~~~~---~-~~l~~~l--~~~l~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~~~~a~~~~-~~~~i~~~~~~- 297 (484)
+++.||....+. . +...++. ..++...+++.+++++=...... ......+..+++++.+. +..+||.+.+.
T Consensus 146 rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p 225 (346)
T PF02350_consen 146 RIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNP 225 (346)
T ss_dssp GEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-H
T ss_pred eEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 567777554432 0 1122222 23433455789999984443211 11234455556666655 56899998842
Q ss_pred --------CCCCCCCcEEEecccCcc---cccccCceeEEEecCCcchHH-HHHhcCCceeeccCCCchHHHHHHHHHcC
Q psy11555 298 --------NMSGKIDKILLKSWAPQR---DILDHPNVKVFISHGGFLGTT-EALYSGVPIIGIPMFGDQKANIRVVEKAG 365 (484)
Q Consensus 298 --------~~~~~~~nv~~~~~~pq~---~ll~h~~~~~~IthgG~~s~~-Eal~~gvP~i~~P~~~dQ~~na~~~~~~G 365 (484)
.+... +|+++.+-++.. .++ .+++++|+-.| ++. ||.+.|+|+|.+=..++. ......|
T Consensus 226 ~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll--~~a~~vvgdSs--GI~eEa~~lg~P~v~iR~~geR----qe~r~~~ 296 (346)
T PF02350_consen 226 RGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLL--KNADLVVGDSS--GIQEEAPSLGKPVVNIRDSGER----QEGRERG 296 (346)
T ss_dssp HHHHHHHHHHTT--TTEEEE----HHHHHHHH--HHESEEEESSH--HHHHHGGGGT--EEECSSS-S-----HHHHHTT
T ss_pred hHHHHHHHHhccc-CCEEEECCCCHHHHHHHH--hcceEEEEcCc--cHHHHHHHhCCeEEEecCCCCC----HHHHhhc
Confidence 13334 599998877665 455 67999999999 566 999999999998444433 2344566
Q ss_pred cEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHH
Q psy11555 366 FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWI 419 (484)
Q Consensus 366 ~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~i 419 (484)
..+.+. .+.++|.++++++++++.+.++++....-+.+ -+..++.++.+
T Consensus 297 ~nvlv~---~~~~~I~~ai~~~l~~~~~~~~~~~~~npYgd--G~as~rI~~~L 345 (346)
T PF02350_consen 297 SNVLVG---TDPEAIIQAIEKALSDKDFYRKLKNRPNPYGD--GNASERIVEIL 345 (346)
T ss_dssp SEEEET---SSHHHHHHHHHHHHH-HHHHHHHHCS--TT-S--S-HHHHHHHHH
T ss_pred ceEEeC---CCHHHHHHHHHHHHhChHHHHhhccCCCCCCC--CcHHHHHHHhh
Confidence 776664 37999999999999876666655544444544 35556655544
No 103
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.25 E-value=3.5e-06 Score=83.53 Aligned_cols=133 Identities=17% Similarity=0.263 Sum_probs=94.6
Q ss_pred EEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC----CCCCCcEEEecccCccc---ccccCceeEEEec-
Q psy11555 258 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM----SGKIDKILLKSWAPQRD---ILDHPNVKVFISH- 329 (484)
Q Consensus 258 v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~----~~~~~nv~~~~~~pq~~---ll~h~~~~~~Ith- 329 (484)
.+++.|... +.+..+.+++++++++.++++..++... ....+||.+.+++|+.+ ++ .++++++..
T Consensus 197 ~il~~G~~~-----~~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~--~~ad~~v~ps 269 (351)
T cd03804 197 YYLSVGRLV-----PYKRIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLY--ARARAFLFPA 269 (351)
T ss_pred EEEEEEcCc-----cccChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHH--HhCCEEEECC
Confidence 456677773 3456778888888888777766554321 13568999999999854 45 567777743
Q ss_pred -CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH-HHHHHHHHHHHH
Q psy11555 330 -GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP-SYKKRAEKVARL 403 (484)
Q Consensus 330 -gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~-~~~~~a~~~~~~ 403 (484)
-| ..++.||+++|+|+|+....+ ....+++.+.|..++.+ +.+++.++|.++++|+ ..++++++.++.
T Consensus 270 ~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~~~G~~~~~~--~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 340 (351)
T cd03804 270 EEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDGVTGILFEEQ--TVESLAAAVERFEKNEDFDPQAIRAHAER 340 (351)
T ss_pred cCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCCCCEEEeCCC--CHHHHHHHHHHHHhCcccCHHHHHHHHHh
Confidence 22 246899999999999976543 33445666789999765 7899999999999888 555665555443
No 104
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.22 E-value=7e-06 Score=75.06 Aligned_cols=144 Identities=20% Similarity=0.178 Sum_probs=108.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecC--CCCC------CCCCcEEEecccCcccccccCceeEE
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG--ENMS------GKIDKILLKSWAPQRDILDHPNVKVF 326 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~--~~~~------~~~~nv~~~~~~pq~~ll~h~~~~~~ 326 (484)
..-|+|++|+. .+..+.-.++..+.+.+..+-.+.|. ..+. +..+|+.+......+.-|. ..+++.
T Consensus 158 ~r~ilI~lGGs-----Dpk~lt~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LM-ke~d~a 231 (318)
T COG3980 158 KRDILITLGGS-----DPKNLTLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELM-KEADLA 231 (318)
T ss_pred hheEEEEccCC-----ChhhhHHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHH-Hhcchh
Confidence 35699999998 56667777777777777554444442 2222 1346777766666554343 689999
Q ss_pred EecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC
Q psy11555 327 ISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD 406 (484)
Q Consensus 327 IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~ 406 (484)
|+.||. |++|++..|+|.+++|+...|--.|...+..|+-..+... ++.......+.++.+|...|.+.-.-++..-+
T Consensus 232 I~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~~~rk~l~~~~~~i~d 309 (318)
T COG3980 232 ISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYH-LKDLAKDYEILQIQKDYARRKNLSFGSKLIGD 309 (318)
T ss_pred eeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCC-CchHHHHHHHHHhhhCHHHhhhhhhccceeec
Confidence 999996 9999999999999999999999999999999999888754 67777777888888888888777666554433
No 105
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.21 E-value=0.00047 Score=73.59 Aligned_cols=135 Identities=23% Similarity=0.276 Sum_probs=85.8
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHh----cCCc-EEEEEecCCCC---------CCCCCcEEEecccCcc-ccccc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIPQ-RVIWKWEGENM---------SGKIDKILLKSWAPQR-DILDH 320 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~~~-~~i~~~~~~~~---------~~~~~nv~~~~~~pq~-~ll~h 320 (484)
..++...|... +.+....+++++. +.+. ++++..++... .++.++|++.+|.++. .++
T Consensus 517 ~~vIg~VGRL~-----~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll-- 589 (694)
T PRK15179 517 RFTVGTVMRVD-----DNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWL-- 589 (694)
T ss_pred CeEEEEEEeCC-----ccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHH--
Confidence 45666677763 2333444455543 3443 55554443211 1246789999997653 344
Q ss_pred CceeEEEe---cCC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh----CCHH
Q psy11555 321 PNVKVFIS---HGG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL----GNPS 392 (484)
Q Consensus 321 ~~~~~~It---hgG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l----~~~~ 392 (484)
..+++|+. +.| -+++.||+++|+|+|+....+ ....+++...|+.++..+.+.+++.+++.+++ .++.
T Consensus 590 ~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~ 665 (694)
T PRK15179 590 TQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPG 665 (694)
T ss_pred HhcCEEEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHH
Confidence 66788875 344 467999999999999976543 45566666689999877766667777776655 4566
Q ss_pred HHHHHHHHH
Q psy11555 393 YKKRAEKVA 401 (484)
Q Consensus 393 ~~~~a~~~~ 401 (484)
+++++++..
T Consensus 666 l~~~ar~~a 674 (694)
T PRK15179 666 IARKAADWA 674 (694)
T ss_pred HHHHHHHHH
Confidence 776665544
No 106
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.19 E-value=5e-06 Score=81.23 Aligned_cols=155 Identities=12% Similarity=0.104 Sum_probs=96.9
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCc---EEEEEecCCC--CCC-C--CCcEEEecccCcccccccCceeEE
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ---RVIWKWEGEN--MSG-K--IDKILLKSWAPQRDILDHPNVKVF 326 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~---~~i~~~~~~~--~~~-~--~~nv~~~~~~pq~~ll~h~~~~~~ 326 (484)
+++|.+--||... --...+..++++...+.. .+++....+. ..+ . ...+.+.+ .-.+++ ..+|+.
T Consensus 167 ~~~I~llPGSR~~---Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i~~~~~~~~~~~~~~--~~~~~m--~~aDla 239 (347)
T PRK14089 167 EGTIAFMPGSRKS---EIKRLMPIFKELAKKLEGKEKILVVPSFFKGKDLKEIYGDISEFEISY--DTHKAL--LEAEFA 239 (347)
T ss_pred CCEEEEECCCCHH---HHHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHHHHHHhcCCCcEEec--cHHHHH--HhhhHH
Confidence 3678888888732 112444445566655533 3333322211 001 0 11223332 223556 679999
Q ss_pred EecCCcchHHHHHhcCCceeec-cCCCchHHHHHHHH---HcCcEEEe-------------cCCCCCHHHHHHHHHHHhC
Q psy11555 327 ISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVE---KAGFGVTL-------------PYDQITEETVLVALRTVLG 389 (484)
Q Consensus 327 IthgG~~s~~Eal~~gvP~i~~-P~~~dQ~~na~~~~---~~G~g~~l-------------~~~~~~~~~l~~ai~~~l~ 389 (484)
|+.+|..|+ |++.+|+|+|+. ....-|..||+++. ..|++-.+ ..++.|++.|.+++.+ ..
T Consensus 240 l~~SGT~TL-E~al~g~P~Vv~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~-~~ 317 (347)
T PRK14089 240 FICSGTATL-EAALIGTPFVLAYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE-MD 317 (347)
T ss_pred HhcCcHHHH-HHHHhCCCEEEEEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH-HH
Confidence 999999888 999999999983 23457888999999 44555444 3467899999999988 33
Q ss_pred CHHHHHHHHHHHHHHhCCCCChHHHHHHHHHH
Q psy11555 390 NPSYKKRAEKVARLFQDRPMPPLDTAIYWIEH 421 (484)
Q Consensus 390 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~ 421 (484)
....++...++.+.+.. ++.++++.+|..
T Consensus 318 ~~~~~~~~~~l~~~l~~---~a~~~~A~~i~~ 346 (347)
T PRK14089 318 REKFFKKSKELREYLKH---GSAKNVAKILKE 346 (347)
T ss_pred HHHHHHHHHHHHHHhcC---CHHHHHHHHHhc
Confidence 44566666777666632 778888777653
No 107
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=98.18 E-value=2.6e-05 Score=62.98 Aligned_cols=127 Identities=19% Similarity=0.242 Sum_probs=82.4
Q ss_pred EEEeecceeccCCCChHHHH-HHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecc--cCcccccccCceeEEEecCCcch
Q psy11555 258 IYFSMGSIIQGKSFPSDKRK-AFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSW--APQRDILDHPNVKVFISHGGFLG 334 (484)
Q Consensus 258 v~vs~Gs~~~~~~~~~~~~~-~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~--~pq~~ll~h~~~~~~IthgG~~s 334 (484)
++|+.||... .+.+-.+. ++.+-.+....++|..+|+.+...... .++.+| -+-.+-+.| .++++|+|+|.||
T Consensus 2 ifVTvGstf~--~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~kpvag-l~v~~F~~~~kiQsli~-darIVISHaG~GS 77 (161)
T COG5017 2 IFVTVGSTFY--PFNRLVLKIEVLELTELIQEELIVQYGNGDIKPVAG-LRVYGFDKEEKIQSLIH-DARIVISHAGEGS 77 (161)
T ss_pred eEEEecCccc--hHHHHHhhHHHHHHHHHhhhheeeeecCCCcccccc-cEEEeechHHHHHHHhh-cceEEEeccCcch
Confidence 6889999842 22222221 122222223458999999865443332 455555 343333444 5679999999999
Q ss_pred HHHHHhcCCceeeccCC--------CchHHHHHHHHHcCcEEEecCCCC-CHHHHHHHHHHHh
Q psy11555 335 TTEALYSGVPIIGIPMF--------GDQKANIRVVEKAGFGVTLPYDQI-TEETVLVALRTVL 388 (484)
Q Consensus 335 ~~Eal~~gvP~i~~P~~--------~dQ~~na~~~~~~G~g~~l~~~~~-~~~~l~~ai~~~l 388 (484)
+..++..++|.|++|-- ..|..-|..+.+.+.-....+.+. -.+.+.....+++
T Consensus 78 IL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte~~L~a~l~~s~~~v~ 140 (161)
T COG5017 78 ILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTELVLQAGLQVSVADVL 140 (161)
T ss_pred HHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCchhhHHhHhhhhhhhc
Confidence 99999999999999953 368889999999999888765432 2344444444554
No 108
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.10 E-value=0.0011 Score=67.99 Aligned_cols=120 Identities=19% Similarity=0.155 Sum_probs=77.0
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCc-EEEEEecCCC---C------CCCCCcEEEecccCcc-cccccCcee
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGEN---M------SGKIDKILLKSWAPQR-DILDHPNVK 324 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~-~~i~~~~~~~---~------~~~~~nv~~~~~~pq~-~ll~h~~~~ 324 (484)
..++.+.|.... .......++.+...++..+. ++++..++.. + .++.++|++.++..+. +++ ..++
T Consensus 398 ~~vIg~VgRl~~-~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~L--aaAD 474 (578)
T PRK15490 398 DTTIGGVFRFVG-DKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWL--QKMN 474 (578)
T ss_pred CcEEEEEEEEeh-hcCHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHH--HhCC
Confidence 345556666543 23445566666665555544 6665554421 1 1245789999986543 345 6788
Q ss_pred EEEec---CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q psy11555 325 VFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVAL 384 (484)
Q Consensus 325 ~~Ith---gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 384 (484)
+|+.. -| .+++.||+++|+|+|+.... .+...+.+...|..++.. +.+.+.+++
T Consensus 475 VfVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG~nG~LVp~~--D~~aLa~ai 532 (578)
T PRK15490 475 VFILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEGVSGFILDDA--QTVNLDQAC 532 (578)
T ss_pred EEEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccCCcEEEECCC--ChhhHHHHH
Confidence 88853 33 46899999999999987654 356777778899999765 445555554
No 109
>PLN02939 transferase, transferring glycosyl groups
Probab=98.09 E-value=0.0011 Score=71.94 Aligned_cols=135 Identities=15% Similarity=0.059 Sum_probs=84.8
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC------C------CCCCCcEEEecccCcc---cc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN------M------SGKIDKILLKSWAPQR---DI 317 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~------~------~~~~~nv~~~~~~pq~---~l 317 (484)
.+++.+.|... +.+.+..+++|+..+ +.++++..++.. + ....++|.+.++.+.. .+
T Consensus 779 ~pLIg~VGRL~-----~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~I 853 (977)
T PLN02939 779 QPLVGCITRLV-----PQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSI 853 (977)
T ss_pred ceEEEEeecCC-----cccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHH
Confidence 46666777773 345555666665432 456666554421 1 1135689998888764 35
Q ss_pred cccCceeEEEecC----CcchHHHHHhcCCceeeccCCC--chHHH--HHHH-HHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 318 LDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFG--DQKAN--IRVV-EKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 318 l~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~--dQ~~n--a~~~-~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
+ ..+|+|+... -..+++||+++|+|.|+....+ |-..+ ...+ +..+.|..++.. +++.|.++|.+++
T Consensus 854 Y--AaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~--D~eaLa~AL~rAL 929 (977)
T PLN02939 854 Y--AASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTP--DEQGLNSALERAF 929 (977)
T ss_pred H--HhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCC--CHHHHHHHHHHHH
Confidence 5 7889998642 2358999999999999876654 21111 0111 123678888655 7888999998876
Q ss_pred C----CHHHHHHHHH
Q psy11555 389 G----NPSYKKRAEK 399 (484)
Q Consensus 389 ~----~~~~~~~a~~ 399 (484)
. |+..++++.+
T Consensus 930 ~~~~~dpe~~~~L~~ 944 (977)
T PLN02939 930 NYYKRKPEVWKQLVQ 944 (977)
T ss_pred HHhccCHHHHHHHHH
Confidence 4 6776666654
No 110
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.07 E-value=0.00024 Score=70.66 Aligned_cols=131 Identities=18% Similarity=0.231 Sum_probs=81.4
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC---------CC-C--CCcEEEecccCcccccc-cC
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM---------SG-K--IDKILLKSWAPQRDILD-HP 321 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~---------~~-~--~~nv~~~~~~pq~~ll~-h~ 321 (484)
++.+++.+-........+.+.+..+++++.....++++.+.+... .. . .+|+.+.+-++..+++. -.
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~ 280 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLK 280 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHH
Confidence 367777775432112345677889999988776555555432111 00 1 46899888776654332 16
Q ss_pred ceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcE-EEecCCCCCHHHHHHHHHHHhCCHHHHHHH
Q psy11555 322 NVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFG-VTLPYDQITEETVLVALRTVLGNPSYKKRA 397 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g-~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a 397 (484)
+++++||-++.+ +.||.+.|+|+|.+- .-| ...+.|.. +.+. .++++|.+++.+++ +++++++.
T Consensus 281 ~a~~vitdSSgg-i~EA~~lg~Pvv~l~--~R~-----e~~~~g~nvl~vg---~~~~~I~~a~~~~~-~~~~~~~~ 345 (365)
T TIGR03568 281 NADAVIGNSSSG-IIEAPSFGVPTINIG--TRQ-----KGRLRADSVIDVD---PDKEEIVKAIEKLL-DPAFKKSL 345 (365)
T ss_pred hCCEEEEcChhH-HHhhhhcCCCEEeec--CCc-----hhhhhcCeEEEeC---CCHHHHHHHHHHHh-ChHHHHHH
Confidence 789999998644 499999999999763 111 22233433 4353 26899999999965 55544443
No 111
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.05 E-value=3.5e-05 Score=77.36 Aligned_cols=173 Identities=14% Similarity=0.238 Sum_probs=104.1
Q ss_pred hHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC------------CCCCCCcEEEecccC
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN------------MSGKIDKILLKSWAP 313 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~------------~~~~~~nv~~~~~~p 313 (484)
.++-++-+++.++|.+|....+ ...+.++...+.+++.|...+|...... ..-.++++.+.++.|
T Consensus 275 ~R~~~gLp~d~vvF~~fn~~~K---I~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~ 351 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSFNNLFK---ISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP 351 (468)
T ss_dssp ETGGGT--SSSEEEEE-S-GGG-----HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE---
T ss_pred CHHHcCCCCCceEEEecCcccc---CCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC
Confidence 3445566667888888888854 8889999999999999998888765421 111367899999888
Q ss_pred ccccc-ccCceeEEE---ecCCcchHHHHHhcCCceeeccC-CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 314 QRDIL-DHPNVKVFI---SHGGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 314 q~~ll-~h~~~~~~I---thgG~~s~~Eal~~gvP~i~~P~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
..+-+ .+..+|+++ ..+|.+|++||+++|||+|.+|- ..-...-|..+...|+...+-. +.++-.+.--++-
T Consensus 352 ~~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~---s~~eYv~~Av~La 428 (468)
T PF13844_consen 352 REEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIAD---SEEEYVEIAVRLA 428 (468)
T ss_dssp HHHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-S---SHHHHHHHHHHHH
T ss_pred HHHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCC---CHHHHHHHHHHHh
Confidence 76554 346688886 45777899999999999999984 2234456677888888866643 5666555555677
Q ss_pred CCHHHHHHHHH-HHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 389 GNPSYKKRAEK-VARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 389 ~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+|++++++.++ +.+.....|.-.....+.-+|.+++
T Consensus 429 ~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~ 465 (468)
T PF13844_consen 429 TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYR 465 (468)
T ss_dssp H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 78887766654 3334444444445666666776654
No 112
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.05 E-value=3.8e-05 Score=76.43 Aligned_cols=140 Identities=16% Similarity=0.229 Sum_probs=88.6
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC--cEEEEEecCCC---------CCCCCCcEEEecccCcc-cccc--cC
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGEN---------MSGKIDKILLKSWAPQR-DILD--HP 321 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~-~ll~--h~ 321 (484)
+.+++..|.... .+.+.+..+++++.++. .++++..+++. ..+++++|.+.+|.++. +.+. ..
T Consensus 180 ~~~i~~~Grl~~---~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~ 256 (359)
T PRK09922 180 PAVFLYVGRLKF---EGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIK 256 (359)
T ss_pred CcEEEEEEEEec---ccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHh
Confidence 456677787632 12344566677766653 35555444422 11356799999998652 2221 13
Q ss_pred ceeEEEec----CCcchHHHHHhcCCceeecc-CCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH--H
Q psy11555 322 NVKVFISH----GGFLGTTEALYSGVPIIGIP-MFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY--K 394 (484)
Q Consensus 322 ~~~~~Ith----gG~~s~~Eal~~gvP~i~~P-~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~--~ 394 (484)
.++++|.. |-..++.||+++|+|+|+.. ..+ ....+++...|..++.. +.+++.++|.++++|++. .
T Consensus 257 ~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~~~G~lv~~~--d~~~la~~i~~l~~~~~~~~~ 330 (359)
T PRK09922 257 NVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPGLNGELYTPG--NIDEFVGKLNKVISGEVKYQH 330 (359)
T ss_pred cCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCCCceEEECCC--CHHHHHHHHHHHHhCcccCCH
Confidence 46777753 32568999999999999875 333 22455566679888765 889999999999998873 4
Q ss_pred HHHHHHHHHH
Q psy11555 395 KRAEKVARLF 404 (484)
Q Consensus 395 ~~a~~~~~~~ 404 (484)
..+++..+.+
T Consensus 331 ~~~~~~~~~~ 340 (359)
T PRK09922 331 DAIPNSIERF 340 (359)
T ss_pred HHHHHHHHHh
Confidence 4444443444
No 113
>PLN02949 transferase, transferring glycosyl groups
Probab=98.01 E-value=0.00052 Score=70.33 Aligned_cols=94 Identities=16% Similarity=0.099 Sum_probs=59.6
Q ss_pred CCCcEEEecccCcccccc-cCceeEEEec---CC-cchHHHHHhcCCceeeccCCCchHHHHHHHHH--cC-cEEEecCC
Q psy11555 302 KIDKILLKSWAPQRDILD-HPNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEK--AG-FGVTLPYD 373 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~ll~-h~~~~~~Ith---gG-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~--~G-~g~~l~~~ 373 (484)
+.++|.+.+++|+.++.. ..++++++.- -| ..++.|||++|+|+|+....+-- ...+.. .| .|... .
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~--~ 407 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA--T 407 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--C
Confidence 467899999998765421 1556777731 22 24799999999999998654310 000111 12 35544 2
Q ss_pred CCCHHHHHHHHHHHhC-CHHHHHHHHHHHH
Q psy11555 374 QITEETVLVALRTVLG-NPSYKKRAEKVAR 402 (484)
Q Consensus 374 ~~~~~~l~~ai~~~l~-~~~~~~~a~~~~~ 402 (484)
+.++++++|.++++ ++..++++.+.++
T Consensus 408 --~~~~la~ai~~ll~~~~~~r~~m~~~ar 435 (463)
T PLN02949 408 --TVEEYADAILEVLRMRETERLEIAAAAR 435 (463)
T ss_pred --CHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 78999999999998 4555555544443
No 114
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.96 E-value=6.9e-05 Score=74.81 Aligned_cols=137 Identities=19% Similarity=0.277 Sum_probs=86.4
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHh----cCC-cEEEEEecCCC---------CCCCCCcEEEecccCcc-ccccc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIP-QRVIWKWEGEN---------MSGKIDKILLKSWAPQR-DILDH 320 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~~-~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~-~ll~h 320 (484)
+..+++.|... +.+.+..+++++. +.+ .++++...+.. ..+.++++.+.++.++. +++
T Consensus 204 ~~~i~~vgrl~-----~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~-- 276 (372)
T cd04949 204 PHKIITVARLA-----PEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVY-- 276 (372)
T ss_pred CCeEEEEEccC-----cccCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHH--
Confidence 34556677763 2333444444443 333 35555443321 11346788888866553 345
Q ss_pred CceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHH
Q psy11555 321 PNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 396 (484)
Q Consensus 321 ~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~ 396 (484)
.+++++|.- |...++.||+++|+|+|+..... .....++....|..++.. +.+++.++|.++++|++.++.
T Consensus 277 ~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~~~G~lv~~~--d~~~la~~i~~ll~~~~~~~~ 351 (372)
T cd04949 277 QKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDGENGYLVPKG--DIEALAEAIIELLNDPKLLQK 351 (372)
T ss_pred hhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccCCCceEeCCC--cHHHHHHHHHHHHcCHHHHHH
Confidence 456776643 33468999999999999965431 134556667789999765 789999999999999876665
Q ss_pred HHHHHHHH
Q psy11555 397 AEKVARLF 404 (484)
Q Consensus 397 a~~~~~~~ 404 (484)
+.+-+...
T Consensus 352 ~~~~a~~~ 359 (372)
T cd04949 352 FSEAAYEN 359 (372)
T ss_pred HHHHHHHH
Confidence 55555443
No 115
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.85 E-value=0.0011 Score=68.54 Aligned_cols=168 Identities=12% Similarity=0.049 Sum_probs=91.4
Q ss_pred CCceEEEcccccCC-C-CCCccchHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHh--cC--CcEEEEEecCC
Q psy11555 225 PNNVIEVAGLHVKS-P-QPLPNDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFE--QI--PQRVIWKWEGE 297 (484)
Q Consensus 225 ~p~v~~vG~~~~~~-~-~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~--~~--~~~~i~~~~~~ 297 (484)
.-++.+||.-..+. + .+..++.++.++-. ++++|-+--||-.+ --...+..++++.+ .+ +.+++....++
T Consensus 380 gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~---EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~ 456 (608)
T PRK01021 380 PLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRG---DILRNLTIQVQAFLASSLASTHQLLVSSANP 456 (608)
T ss_pred CCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHH---HHHHHHHHHHHHHHHHHhccCeEEEEecCch
Confidence 44577788433332 1 12223334444333 35788888899832 22345556677766 44 23565543332
Q ss_pred C--------CCCCC-CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeecc-CCCchHHHHHHHHHc---
Q psy11555 298 N--------MSGKI-DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIP-MFGDQKANIRVVEKA--- 364 (484)
Q Consensus 298 ~--------~~~~~-~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P-~~~dQ~~na~~~~~~--- 364 (484)
. ..+.+ -++.+..--...+++ ..|++.+.-.|. .+.|++..|+|++++= ...=-..-++++.+.
T Consensus 457 ~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m--~aaD~aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~ 533 (608)
T PRK01021 457 KYDHLILEVLQQEGCLHSHIVPSQFRYELM--RECDCALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILP 533 (608)
T ss_pred hhHHHHHHHHhhcCCCCeEEecCcchHHHH--HhcCeeeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCC
Confidence 1 10101 112222100124566 678899888884 7899999999999862 222222345565551
Q ss_pred ---------CcEE--E-ec-CCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 365 ---------GFGV--T-LP-YDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 365 ---------G~g~--~-l~-~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
|-.+ . +. .++.|+++|.+++ ++|.|+++++++++
T Consensus 534 yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~ 580 (608)
T PRK01021 534 AYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKD 580 (608)
T ss_pred eeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHH
Confidence 1111 1 21 3577899999997 88888765554444
No 116
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.82 E-value=0.00031 Score=70.90 Aligned_cols=111 Identities=13% Similarity=0.174 Sum_probs=75.3
Q ss_pred CCcEEEecccCcc-cccccCceeEEEe--c--CCc-chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCC
Q psy11555 303 IDKILLKSWAPQR-DILDHPNVKVFIS--H--GGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 376 (484)
Q Consensus 303 ~~nv~~~~~~pq~-~ll~h~~~~~~It--h--gG~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~ 376 (484)
.++|.+.+++++. .++ ..++++|. + .|. +.+.|||++|+|+|+.+...+.. ....|.|..+. . +
T Consensus 279 ~~~V~~~G~v~~~~~~~--~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~~~g~lv~-~--~ 348 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYL--AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALPGAELLVA-A--D 348 (397)
T ss_pred CCCeEEeeecCCHHHHH--HhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccCCcceEeC-C--C
Confidence 4689999999863 344 56778873 2 343 46999999999999987643221 12346787775 3 7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 377 EETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 377 ~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
.+++.++|.++++|++.++++.+-++....+..+ .+..+.-++.+++
T Consensus 349 ~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fs-w~~~~~~~~~~l~ 395 (397)
T TIGR03087 349 PADFAAAILALLANPAEREELGQAARRRVLQHYH-WPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHhc
Confidence 8999999999999988777776666554322134 4455555555543
No 117
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.81 E-value=0.0022 Score=62.28 Aligned_cols=163 Identities=14% Similarity=0.162 Sum_probs=105.0
Q ss_pred hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC-CcEEEEEecCCC-CC-------CCCCcEEEec---ccCcccc
Q psy11555 250 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGEN-MS-------GKIDKILLKS---WAPQRDI 317 (484)
Q Consensus 250 l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~-~~-------~~~~nv~~~~---~~pq~~l 317 (484)
+...++..+++++=-..+....-++..+++.+..++. ...++.-.-... .. +..+++++.+ |.+...+
T Consensus 199 ~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L 278 (383)
T COG0381 199 LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNL 278 (383)
T ss_pred hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHH
Confidence 3444456888887555332111123333444444444 224444333211 00 1234577654 4555566
Q ss_pred cccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHH
Q psy11555 318 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 397 (484)
Q Consensus 318 l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a 397 (484)
+ .++.+++|-.| |..-||-..|+|++++-...+++. ..+.|.-+.+.. +.+.+.+++.+++++++..++|
T Consensus 279 ~--~~a~~iltDSG-giqEEAp~lg~Pvl~lR~~TERPE----~v~agt~~lvg~---~~~~i~~~~~~ll~~~~~~~~m 348 (383)
T COG0381 279 M--KNAFLILTDSG-GIQEEAPSLGKPVLVLRDTTERPE----GVEAGTNILVGT---DEENILDAATELLEDEEFYERM 348 (383)
T ss_pred H--HhceEEEecCC-chhhhHHhcCCcEEeeccCCCCcc----ceecCceEEeCc---cHHHHHHHHHHHhhChHHHHHH
Confidence 6 56789999988 478899999999999988888876 345666666654 5799999999999999999999
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 398 EKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++...-+.+. .+.++.++.+.+-..
T Consensus 349 ~~~~npYgdg--~as~rIv~~l~~~~~ 373 (383)
T COG0381 349 SNAKNPYGDG--NASERIVEILLNYFD 373 (383)
T ss_pred hcccCCCcCc--chHHHHHHHHHHHhh
Confidence 8888777663 456666666655443
No 118
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.72 E-value=0.00064 Score=70.40 Aligned_cols=153 Identities=15% Similarity=0.175 Sum_probs=92.1
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHh----cCCc-EEEEEecCCC---C------CCCCCcEEEecccCcccccccC
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFE----QIPQ-RVIWKWEGEN---M------SGKIDKILLKSWAPQRDILDHP 321 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~----~~~~-~~i~~~~~~~---~------~~~~~nv~~~~~~pq~~ll~h~ 321 (484)
+.++++.|... +.+.+..+++|+. +.+. ++....+++. + .++.++|.+.++.+-.+++ .
T Consensus 319 ~~~il~vGrl~-----~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~--~ 391 (500)
T TIGR02918 319 PFSIITASRLA-----KEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHRNLSEVY--K 391 (500)
T ss_pred CeEEEEEeccc-----cccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCCCHHHHH--H
Confidence 45667778873 3444555555554 3333 3332222211 1 1235678888887666777 5
Q ss_pred ceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCC--CCC----HHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD--QIT----EETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~--~~~----~~~l~~ai~~~l~~~ 391 (484)
.++++|.- |-..+++||+++|+|+|+....+ .+...+++...|..++.. .-+ .++|+++|.++++ +
T Consensus 392 ~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~ 467 (500)
T TIGR02918 392 DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-S 467 (500)
T ss_pred hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-h
Confidence 67777753 23468999999999999976531 134556666789888632 112 7889999999995 4
Q ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHH
Q psy11555 392 SYKKRAEKVARLFQDRPMPPLDTAIYWIE 420 (484)
Q Consensus 392 ~~~~~a~~~~~~~~~~~~~~~~~~~~~ie 420 (484)
..++++.+-+.....+ .+....+-.|.+
T Consensus 468 ~~~~~~~~~a~~~a~~-fs~~~v~~~w~~ 495 (500)
T TIGR02918 468 NDIDAFHEYSYQIAEG-FLTANIIEKWKK 495 (500)
T ss_pred HHHHHHHHHHHHHHHh-cCHHHHHHHHHH
Confidence 4455555555444332 555555555554
No 119
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.72 E-value=0.00057 Score=68.38 Aligned_cols=121 Identities=16% Similarity=0.111 Sum_probs=71.8
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC-cEEEEEecCCC---CCC--CCCcEEEecccCccccccc-CceeEEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGEN---MSG--KIDKILLKSWAPQRDILDH-PNVKVFIS 328 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~---~~~--~~~nv~~~~~~pq~~ll~h-~~~~~~It 328 (484)
+++++.+|+... ....+.+ .+..+..+ .++++...++. ... ..+||++.+++|..++... ..++++|.
T Consensus 205 ~~~i~y~G~l~~--~~d~~ll---~~la~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~ 279 (373)
T cd04950 205 RPVIGYYGAIAE--WLDLELL---EALAKARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAIL 279 (373)
T ss_pred CCEEEEEecccc--ccCHHHH---HHHHHHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEec
Confidence 567777898853 2223333 33333444 46666544311 111 2479999999987765321 44666653
Q ss_pred --------cCCc-chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 329 --------HGGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 329 --------hgG~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++. +.+.|++++|+|+|+.++. ...+..+.+... .. +.+++.++|.+++.++
T Consensus 280 P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~-------~~~~~~~~~~~~-~~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 280 PFRLNELTRATSPLKLFEYLAAGKPVVATPLP-------EVRRYEDEVVLI-AD--DPEEFVAAIEKALLED 341 (373)
T ss_pred CCccchhhhcCCcchHHHHhccCCCEEecCcH-------HHHhhcCcEEEe-CC--CHHHHHHHHHHHHhcC
Confidence 2222 3589999999999987631 222333433333 23 7899999999976543
No 120
>PHA01633 putative glycosyl transferase group 1
Probab=97.49 E-value=0.00051 Score=66.88 Aligned_cols=128 Identities=12% Similarity=0.159 Sum_probs=76.5
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----Cc---EE-EEEecCCCC--CCCCCcEEEec---ccCcccccc-c
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQ---RV-IWKWEGENM--SGKIDKILLKS---WAPQRDILD-H 320 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~~---~~-i~~~~~~~~--~~~~~nv~~~~---~~pq~~ll~-h 320 (484)
+.++++..|... +.+....+++|++.+ +. ++ ++..|.+.. ...+++|++.+ ++++.++.. .
T Consensus 147 ~~~~i~~vGRl~-----~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~~~~~l~l~~~V~f~g~~G~~~~~dl~~~y 221 (335)
T PHA01633 147 DTIKFGIVSGLT-----KRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHKQFTQLEVPANVHFVAEFGHNSREYIFAFY 221 (335)
T ss_pred CCeEEEEEeCCc-----cccCHHHHHHHHHHHHHhCCCccccEEEEEEcHHHHHHcCCCCcEEEEecCCCCCHHHHHHHH
Confidence 356666777773 345555666666543 21 12 233343211 23577899884 445443321 2
Q ss_pred CceeEEEec----CCcchHHHHHhcCCceeeccC------CCch------HHHHHHHH--HcCcEEEecCCCCCHHHHHH
Q psy11555 321 PNVKVFISH----GGFLGTTEALYSGVPIIGIPM------FGDQ------KANIRVVE--KAGFGVTLPYDQITEETVLV 382 (484)
Q Consensus 321 ~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~------~~dQ------~~na~~~~--~~G~g~~l~~~~~~~~~l~~ 382 (484)
..+++|+.. |-..++.||+++|+|+|+... .+|+ ..++.... ..|.|..++ ..+++++.+
T Consensus 222 ~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~--~~d~~~la~ 299 (335)
T PHA01633 222 GAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIH--KFQIEDMAN 299 (335)
T ss_pred HhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeec--CCCHHHHHH
Confidence 667888864 324579999999999998633 2332 22333333 357777775 458999999
Q ss_pred HHHHHhC
Q psy11555 383 ALRTVLG 389 (484)
Q Consensus 383 ai~~~l~ 389 (484)
+|.+++.
T Consensus 300 ai~~~~~ 306 (335)
T PHA01633 300 AIILAFE 306 (335)
T ss_pred HHHHHHh
Confidence 9999853
No 121
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.48 E-value=0.0026 Score=62.76 Aligned_cols=175 Identities=17% Similarity=0.139 Sum_probs=95.8
Q ss_pred CCCceEEEcccccCC-C-CCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhc----CCc-EEEEEecC
Q psy11555 224 YPNNVIEVAGLHVKS-P-QPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IPQ-RVIWKWEG 296 (484)
Q Consensus 224 ~~p~v~~vG~~~~~~-~-~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~----~~~-~~i~~~~~ 296 (484)
..-++.|||.-..+. . .....+..+.+-..++++|.+--||--. --...+..++++.+. .+. ++++...+
T Consensus 151 ~g~~~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLPGSR~~---EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~ 227 (373)
T PF02684_consen 151 HGVPVTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLPGSRKS---EIKRLLPIFLEAAKLLKKQRPDLQFVVPVAP 227 (373)
T ss_pred cCCCeEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeCCCCHH---HHHHHHHHHHHHHHHHHHhCCCeEEEEecCC
Confidence 334688888433332 1 1112333333312235888888899832 112334445555443 233 66665544
Q ss_pred CCCC--------CCCCcEEEecc-cCcccccccCceeEEEecCCcchHHHHHhcCCceeec-cCCCchHHHHHHHHHcCc
Q psy11555 297 ENMS--------GKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGI-PMFGDQKANIRVVEKAGF 366 (484)
Q Consensus 297 ~~~~--------~~~~nv~~~~~-~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~-P~~~dQ~~na~~~~~~G~ 366 (484)
+... ....++.+... -...+++ ..+++.+.-.| ..+.|+...|+|+|++ -...=...-|+++.+...
T Consensus 228 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m--~~ad~al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~ 304 (373)
T PF02684_consen 228 EVHEELIEEILAEYPPDVSIVIIEGESYDAM--AAADAALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKY 304 (373)
T ss_pred HHHHHHHHHHHHhhCCCCeEEEcCCchHHHH--HhCcchhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCE
Confidence 2111 11222332221 1334556 56788877777 4789999999999986 222223345566554321
Q ss_pred -EE-----------EecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy11555 367 -GV-----------TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLF 404 (484)
Q Consensus 367 -g~-----------~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~ 404 (484)
|+ .+-.++.|++.|.+++.++++|++.++..+...+.+
T Consensus 305 isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~ 354 (373)
T PF02684_consen 305 ISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEKRKKQKELFREI 354 (373)
T ss_pred eechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 11 112357899999999999999987655444444433
No 122
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.46 E-value=0.0036 Score=60.66 Aligned_cols=187 Identities=15% Similarity=0.133 Sum_probs=105.3
Q ss_pred eEEEcccccCC-C-CCCccchHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCCC
Q psy11555 228 VIEVAGLHVKS-P-QPLPNDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGENM 299 (484)
Q Consensus 228 v~~vG~~~~~~-~-~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~~ 299 (484)
+.|||.-..+. + .+-.+.+++-+... +.+++.+--||--. --..++..+.++...+ + .+++.-..+...
T Consensus 158 ~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~s---EI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~ 234 (381)
T COG0763 158 CTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRS---EIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKY 234 (381)
T ss_pred eEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHH---HHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHH
Confidence 67888433332 2 22233444444333 46788888899832 2233444455554433 3 377776655221
Q ss_pred CC-----C-----CCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCC-CchHHHHHHHHHcCcE-
Q psy11555 300 SG-----K-----IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMF-GDQKANIRVVEKAGFG- 367 (484)
Q Consensus 300 ~~-----~-----~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~-~dQ~~na~~~~~~G~g- 367 (484)
.. . ..++.+.+-.- .+.+ ..+|+.+.-+|. .+.|++.+|+|||+.=-. .=-..-|++..+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~a~--~~aD~al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yis 310 (381)
T COG0763 235 RRIIEEALKWEVAGLSLILIDGEK-RKAF--AAADAALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVS 310 (381)
T ss_pred HHHHHHHhhccccCceEEecCchH-HHHH--HHhhHHHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCccc
Confidence 00 0 11222222111 1233 567777777774 688999999999985211 1112233443333211
Q ss_pred -----------EEecCCCCCHHHHHHHHHHHhCCH----HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 368 -----------VTLPYDQITEETVLVALRTVLGNP----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 368 -----------~~l~~~~~~~~~l~~ai~~~l~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
-.+-.++.+++.|.+++..++.|+ .+++...++.+.++.. .+.+.++..|-..+
T Consensus 311 LpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~--~~~e~aA~~vl~~~ 379 (381)
T COG0763 311 LPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED--PASEIAAQAVLELL 379 (381)
T ss_pred chHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHh
Confidence 111125678999999999999987 5777777788888773 47788887765543
No 123
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.37 E-value=0.0018 Score=63.67 Aligned_cols=112 Identities=13% Similarity=0.206 Sum_probs=76.4
Q ss_pred cEEEEEecCCCCCCCCCcEEEecccCccccccc-CceeEEEecC--------Cc------chHHHHHhcCCceeeccCCC
Q psy11555 288 QRVIWKWEGENMSGKIDKILLKSWAPQRDILDH-PNVKVFISHG--------GF------LGTTEALYSGVPIIGIPMFG 352 (484)
Q Consensus 288 ~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h-~~~~~~Ithg--------G~------~s~~Eal~~gvP~i~~P~~~ 352 (484)
.++++...+.......+||.+.+|+|+.++..+ ...-.+|.-+ .+ +-+.|+|++|+|+|+.
T Consensus 191 ~~l~i~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~---- 266 (333)
T PRK09814 191 IKLTVFGPNPEDLENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW---- 266 (333)
T ss_pred CeEEEECCCccccccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----
Confidence 354443333322245689999999998876532 1111122211 11 1278899999999985
Q ss_pred chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC--HHHHHHHHHHHHHHhCC
Q psy11555 353 DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN--PSYKKRAEKVARLFQDR 407 (484)
Q Consensus 353 dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~--~~~~~~a~~~~~~~~~~ 407 (484)
++...+..+++.++|++++ +.+++.+++.++..+ ..+++|+++++++++..
T Consensus 267 ~~~~~~~~V~~~~~G~~v~----~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~~g 319 (333)
T PRK09814 267 SKAAIADFIVENGLGFVVD----SLEELPEIIDNITEEEYQEMVENVKKISKLLRNG 319 (333)
T ss_pred CCccHHHHHHhCCceEEeC----CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcc
Confidence 4556889999999999996 567899999886432 24789999999999875
No 124
>PHA01630 putative group 1 glycosyl transferase
Probab=97.33 E-value=0.0034 Score=61.49 Aligned_cols=105 Identities=18% Similarity=0.137 Sum_probs=63.1
Q ss_pred ccCcccccc-cCceeEEEe---c-CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc--------------------C
Q psy11555 311 WAPQRDILD-HPNVKVFIS---H-GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA--------------------G 365 (484)
Q Consensus 311 ~~pq~~ll~-h~~~~~~It---h-gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~--------------------G 365 (484)
++|+.++.. ...+++|+. . |...++.|||++|+|+|+....+ ....+.+. +
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg----~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGA----WSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCC----chhhccCCCceEEeeecccccccccCCcc
Confidence 366554321 167788873 2 22457999999999999976543 11222222 3
Q ss_pred cEEEecCCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 366 FGVTLPYDQITEETVLVALRTVLGN---PSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 366 ~g~~l~~~~~~~~~l~~ai~~~l~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+|..++. +.+++.+++.+++.| +.+++++++-++...++ .+ .+..++-++.+++
T Consensus 273 ~G~~v~~---~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~-fs-~~~ia~k~~~l~~ 329 (331)
T PHA01630 273 VGYFLDP---DIEDAYQKLLEALANWTPEKKKENLEGRAILYREN-YS-YNAIAKMWEKILE 329 (331)
T ss_pred cccccCC---CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh-CC-HHHHHHHHHHHHh
Confidence 4555543 567788888888876 45666666655555443 44 4555555555554
No 125
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.13 E-value=0.00048 Score=57.78 Aligned_cols=78 Identities=22% Similarity=0.317 Sum_probs=47.2
Q ss_pred CCcEEEecccCc-ccccccCceeEEEecC----C-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCC
Q psy11555 303 IDKILLKSWAPQ-RDILDHPNVKVFISHG----G-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 376 (484)
Q Consensus 303 ~~nv~~~~~~pq-~~ll~h~~~~~~Ithg----G-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~ 376 (484)
.+||++.+|+++ .+++ .++++.|... | -+.+.|++++|+|+|+.+. ......+..|.|..+ .. +
T Consensus 52 ~~~v~~~g~~~e~~~~l--~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~~~~~~~~-~~--~ 121 (135)
T PF13692_consen 52 RPNVRFHGFVEELPEIL--AAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEEDGCGVLV-AN--D 121 (135)
T ss_dssp HCTEEEE-S-HHHHHHH--HC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS---SEEEE--TT---
T ss_pred CCCEEEcCCHHHHHHHH--HhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheeecCCeEEE-CC--C
Confidence 569999999853 2344 4566665422 2 3789999999999999765 122344447888777 34 8
Q ss_pred HHHHHHHHHHHhCC
Q psy11555 377 EETVLVALRTVLGN 390 (484)
Q Consensus 377 ~~~l~~ai~~~l~~ 390 (484)
++++.++|.++++|
T Consensus 122 ~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 122 PEELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999865
No 126
>PRK14098 glycogen synthase; Provisional
Probab=96.95 E-value=0.0039 Score=64.58 Aligned_cols=132 Identities=11% Similarity=0.087 Sum_probs=82.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC-----C----CCCCCcEEEecccCcc---cccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKILLKSWAPQR---DILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~-----~----~~~~~nv~~~~~~pq~---~ll~ 319 (484)
+.+++...|... +.+.++.+++++..+ +.++++..+++. + ...+++|.+.+.++.. .++
T Consensus 306 ~~~~i~~vgRl~-----~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~- 379 (489)
T PRK14098 306 ETPLVGVIINFD-----DFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI- 379 (489)
T ss_pred CCCEEEEecccc-----ccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHH-
Confidence 356777778773 334455555555543 446665544421 1 1246789999888764 345
Q ss_pred cCceeEEEecCC----cchHHHHHhcCCceeeccCCC--chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh---CC
Q psy11555 320 HPNVKVFISHGG----FLGTTEALYSGVPIIGIPMFG--DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL---GN 390 (484)
Q Consensus 320 h~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~--dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l---~~ 390 (484)
..+|+|+...= ..+.+||+++|+|.|+....+ |...+ ..++.+.|..++.. ++++|.++|.+++ +|
T Consensus 380 -a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~~~G~l~~~~--d~~~la~ai~~~l~~~~~ 454 (489)
T PRK14098 380 -AGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDKGSGFIFHDY--TPEALVAKLGEALALYHD 454 (489)
T ss_pred -HhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCCCceeEeCCC--CHHHHHHHHHHHHHHHcC
Confidence 67888885432 247899999999988876543 21110 11124789888755 7899999999865 56
Q ss_pred HHHHHHH
Q psy11555 391 PSYKKRA 397 (484)
Q Consensus 391 ~~~~~~a 397 (484)
++..+++
T Consensus 455 ~~~~~~~ 461 (489)
T PRK14098 455 EERWEEL 461 (489)
T ss_pred HHHHHHH
Confidence 5444333
No 127
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=96.66 E-value=0.00048 Score=58.22 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=26.6
Q ss_pred CccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCc
Q psy11555 97 KYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHII 131 (484)
Q Consensus 97 ~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~ 131 (484)
..|+++.+.. ...+..+||+++||++.....+..
T Consensus 100 ~~~~i~~~~~-~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 100 ADDVIIAAPL-AFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp ECCEECHHHH-HTHHHHHHHHHTS-EEEEESSGGG
T ss_pred cchHHHhhhh-cCccceeEhhhCchHHHHhhCCcC
Confidence 6788887766 567888999999999998877654
No 128
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=96.57 E-value=0.017 Score=44.79 Aligned_cols=82 Identities=21% Similarity=0.164 Sum_probs=54.9
Q ss_pred cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcC-cEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCC
Q psy11555 329 HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAG-FGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDR 407 (484)
Q Consensus 329 hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G-~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~ 407 (484)
.|-..-+.|++++|+|+|.-+. ...... -..| -++..+ +.+++.++|..+++|+..++++.+-+...-.+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~-~~~~~~~~~~~----~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~ 79 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREI-FEDGEHIITYN----DPEELAEKIEYLLENPEERRRIAKNARERVLK 79 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHH-cCCCCeEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 4445679999999999998543 223333 3334 455553 79999999999999998777776666544332
Q ss_pred CCChHHHHHHHH
Q psy11555 408 PMPPLDTAIYWI 419 (484)
Q Consensus 408 ~~~~~~~~~~~i 419 (484)
-.+...++-.++
T Consensus 80 ~~t~~~~~~~il 91 (92)
T PF13524_consen 80 RHTWEHRAEQIL 91 (92)
T ss_pred hCCHHHHHHHHH
Confidence 255555555544
No 129
>PRK14099 glycogen synthase; Provisional
Probab=96.48 E-value=0.017 Score=59.79 Aligned_cols=137 Identities=13% Similarity=0.157 Sum_probs=78.7
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC-----C----CCCCCcE-EEecccCcccccc--c
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKI-LLKSWAPQRDILD--H 320 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~-----~----~~~~~nv-~~~~~~pq~~ll~--h 320 (484)
.+++...|.. .+.+.+..+++|+..+ +.++++..+++. + ...++++ .+.++ +.++.. .
T Consensus 295 ~~li~~VgRL-----~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~~~l~~~~~ 367 (485)
T PRK14099 295 ALLLGVISRL-----SWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--DEALAHLIQ 367 (485)
T ss_pred CcEEEEEecC-----CccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHH
Confidence 3455556776 3445566666666543 346665554421 1 1134555 56666 233221 1
Q ss_pred CceeEEEec---CC-cchHHHHHhcCCceeeccCCC--chHHHHHHH-H--HcCcEEEecCCCCCHHHHHHHHHH---Hh
Q psy11555 321 PNVKVFISH---GG-FLGTTEALYSGVPIIGIPMFG--DQKANIRVV-E--KAGFGVTLPYDQITEETVLVALRT---VL 388 (484)
Q Consensus 321 ~~~~~~Ith---gG-~~s~~Eal~~gvP~i~~P~~~--dQ~~na~~~-~--~~G~g~~l~~~~~~~~~l~~ai~~---~l 388 (484)
..+++|+.. =| ..+.+||+++|+|.|+....+ |--.+.... + ..+.|..++.. ++++|.++|.+ ++
T Consensus 368 a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~--d~~~La~ai~~a~~l~ 445 (485)
T PRK14099 368 AGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPV--TADALAAALRKTAALF 445 (485)
T ss_pred hcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCC--CHHHHHHHHHHHHHHh
Confidence 458888853 22 347899999997777655432 211111000 0 11579998766 78999999997 67
Q ss_pred CCHHHHHHHHHHH
Q psy11555 389 GNPSYKKRAEKVA 401 (484)
Q Consensus 389 ~~~~~~~~a~~~~ 401 (484)
+|++.++++.+-+
T Consensus 446 ~d~~~~~~l~~~~ 458 (485)
T PRK14099 446 ADPVAWRRLQRNG 458 (485)
T ss_pred cCHHHHHHHHHHh
Confidence 7887776666654
No 130
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.27 E-value=0.11 Score=53.05 Aligned_cols=129 Identities=19% Similarity=0.330 Sum_probs=91.8
Q ss_pred hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-------------C-CCCcEEEecccCcc
Q psy11555 250 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------------G-KIDKILLKSWAPQR 315 (484)
Q Consensus 250 l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-------------~-~~~nv~~~~~~pq~ 315 (484)
++-.++.+||+||+...+ ...+.+..-++.++..|..++|..+++.-+ + .++++++.+-.|..
T Consensus 424 lglp~~avVf~c~~n~~K---~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 424 LGLPEDAVVFCCFNNYFK---ITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred cCCCCCeEEEEecCCccc---CCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 444557899999999864 778999999999999999999987762111 1 35678888877776
Q ss_pred cccc-cCceeEEE---ecCCcchHHHHHhcCCceeeccCCCchHH--H-HHHHHHcCcEEEecCCCCCHHHHHHHHH
Q psy11555 316 DILD-HPNVKVFI---SHGGFLGTTEALYSGVPIIGIPMFGDQKA--N-IRVVEKAGFGVTLPYDQITEETVLVALR 385 (484)
Q Consensus 316 ~ll~-h~~~~~~I---thgG~~s~~Eal~~gvP~i~~P~~~dQ~~--n-a~~~~~~G~g~~l~~~~~~~~~l~~ai~ 385 (484)
+-++ +.-+|+|. --||..|..|++..|||+|.. .|+||. | +..+...|+-..+-.. ..+=+..++.
T Consensus 501 ~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~--~G~~FasR~~~si~~~agi~e~vA~s--~~dYV~~av~ 573 (620)
T COG3914 501 DHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTR--VGEQFASRNGASIATNAGIPELVADS--RADYVEKAVA 573 (620)
T ss_pred HHHHhhchhheeeecccCCCccchHHHHHhcCceeee--ccHHHHHhhhHHHHHhcCCchhhcCC--HHHHHHHHHH
Confidence 5443 46677776 468999999999999999986 467764 2 2334445666555332 3455666664
No 131
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.97 E-value=0.02 Score=59.51 Aligned_cols=103 Identities=16% Similarity=0.204 Sum_probs=73.1
Q ss_pred CcEEEecccCccccc-ccCceeEEEecC---CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHH
Q psy11555 304 DKILLKSWAPQRDIL-DHPNVKVFISHG---GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 379 (484)
Q Consensus 304 ~nv~~~~~~pq~~ll-~h~~~~~~Ithg---G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 379 (484)
..|.+.++.+..++. ....++++|.-+ |.++..||+.+|+|+| .......++...-|.++. +.++
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~~NG~li~----d~~~ 477 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHNKNGYIID----DISE 477 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcCCCcEEeC----CHHH
Confidence 678888888743332 126788888655 5679999999999999 333456677777888883 6899
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHH
Q psy11555 380 VLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYW 418 (484)
Q Consensus 380 l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 418 (484)
|.++|..+|.+++-.+++..-|-....+ .+....+-+|
T Consensus 478 l~~al~~~L~~~~~wn~~~~~sy~~~~~-yS~~~i~~kW 515 (519)
T TIGR03713 478 LLKALDYYLDNLKNWNYSLAYSIKLIDD-YSSENIIERL 515 (519)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHH-hhHHHHHHHH
Confidence 9999999999987666666655544442 4444444444
No 132
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=95.76 E-value=0.025 Score=48.20 Aligned_cols=33 Identities=6% Similarity=0.144 Sum_probs=18.2
Q ss_pred CCCccEEEEcccchhhHHHHHH-HhCCCEEEEeC
Q psy11555 95 SKKYDLIITEVFNTDCFLGFVY-KFKVPYIAVSA 127 (484)
Q Consensus 95 ~~~~DlvI~d~~~~~~~~~~A~-~l~iP~i~~~~ 127 (484)
..+||+|.+..........++. ..++|+|....
T Consensus 71 ~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 71 RERPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp T---SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred ccCCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 7899999998753333334555 77999987665
No 133
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=95.59 E-value=0.018 Score=52.30 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=38.3
Q ss_pred CCCcEEEecccCccccc-cc-CceeEEEecCC----cchHHHHHhcCCceeeccCCC
Q psy11555 302 KIDKILLKSWAPQRDIL-DH-PNVKVFISHGG----FLGTTEALYSGVPIIGIPMFG 352 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~ll-~h-~~~~~~IthgG----~~s~~Eal~~gvP~i~~P~~~ 352 (484)
..+|+.+.++++..+.+ .- ..++++++... .+++.||+++|+|+|+.+..+
T Consensus 159 ~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 159 LLDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred CcccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 46799999997433221 11 34889998876 679999999999999987654
No 134
>KOG4626|consensus
Probab=95.47 E-value=0.19 Score=51.53 Aligned_cols=194 Identities=13% Similarity=0.238 Sum_probs=112.4
Q ss_pred CCCceEEEcccccCCCCCCcc---chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC--
Q psy11555 224 YPNNVIEVAGLHVKSPQPLPN---DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-- 298 (484)
Q Consensus 224 ~~p~v~~vG~~~~~~~~~l~~---~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~-- 298 (484)
..|+..+||.-..+...-+++ ..+.-..-+++.+||.+|-... ++..+.++.-++.+.+-|..++|......
T Consensus 724 ~lPh~ffi~d~~qk~~~~~dpn~kP~r~~y~Lp~d~vvf~~FNqLy---KidP~~l~~W~~ILk~VPnS~LwllrfPa~g 800 (966)
T KOG4626|consen 724 YLPHCFFIGDHKQKNQDVLDPNNKPTRSQYGLPEDAVVFCNFNQLY---KIDPSTLQMWANILKRVPNSVLWLLRFPAVG 800 (966)
T ss_pred hCCceEEecCcccccccccCCCCCCCCCCCCCCCCeEEEeechhhh---cCCHHHHHHHHHHHHhCCcceeEEEeccccc
Confidence 457778888544322111111 1111122234578888887774 47889999999999999999999865421
Q ss_pred ----------CCCCCCcEEEecccCcccc-----cccCceeEEEecCCcchHHHHHhcCCceeeccCCC-chHHHHHHHH
Q psy11555 299 ----------MSGKIDKILLKSWAPQRDI-----LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVE 362 (484)
Q Consensus 299 ----------~~~~~~nv~~~~~~pq~~l-----l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~-dQ~~na~~~~ 362 (484)
+.-.|+.|.+.+-.+-.+- |++=-.|-+.+. |..|.+|.++.|+|||.+|.-. -..--+..+.
T Consensus 801 e~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~ 879 (966)
T KOG4626|consen 801 EQRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLT 879 (966)
T ss_pred hHHHHHHHHHhCCCccceeeccccchHHHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHH
Confidence 1124667777665443321 212122334454 4678999999999999999632 2233345567
Q ss_pred HcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC-CCCChHHHHHHHHHHHHH
Q psy11555 363 KAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQD-RPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 363 ~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~ie~~~~ 424 (484)
..|+|-.+-+ +.++-.+.--++-+|..+-++++.--+..+. .|.-....-+.-+|.+..
T Consensus 880 ~~Gl~hliak---~~eEY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~ 939 (966)
T KOG4626|consen 880 ALGLGHLIAK---NREEYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYL 939 (966)
T ss_pred HcccHHHHhh---hHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHH
Confidence 7899986643 4555544444566677776666543333332 232222333444555443
No 135
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=95.08 E-value=0.18 Score=42.20 Aligned_cols=41 Identities=12% Similarity=0.029 Sum_probs=27.9
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHH--HHHHhC-CCEEEEeCC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLG--FVYKFK-VPYIAVSAA 128 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~--~A~~l~-iP~i~~~~~ 128 (484)
++.++++ ..+||+|.+......+..+ ++...+ +|+|.....
T Consensus 65 ~l~k~ik-~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 65 RLRKIIK-KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HHHHHhc-cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 4678887 8899999998763222322 456667 899865553
No 136
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=95.02 E-value=0.48 Score=48.76 Aligned_cols=75 Identities=16% Similarity=0.085 Sum_probs=50.4
Q ss_pred EecccCcccccc-cCceeEEEec---CC-cchHHHHHhcCCc----eeeccCCCchHHHHHHHHHcCcEEEecCCCCCHH
Q psy11555 308 LKSWAPQRDILD-HPNVKVFISH---GG-FLGTTEALYSGVP----IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEE 378 (484)
Q Consensus 308 ~~~~~pq~~ll~-h~~~~~~Ith---gG-~~s~~Eal~~gvP----~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~ 378 (484)
+.+++++.++.+ ...+++|+.- -| ..++.||+++|+| +|+--..+- +.. ...|+.+++. +.+
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~~~---~~~g~lv~p~--d~~ 415 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----AEE---LSGALLVNPY--DID 415 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccc----hhh---cCCCEEECCC--CHH
Confidence 346777766532 2678888742 34 3578999999999 555433321 111 2457888766 789
Q ss_pred HHHHHHHHHhCCH
Q psy11555 379 TVLVALRTVLGNP 391 (484)
Q Consensus 379 ~l~~ai~~~l~~~ 391 (484)
+++++|.++++++
T Consensus 416 ~la~ai~~~l~~~ 428 (460)
T cd03788 416 EVADAIHRALTMP 428 (460)
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999865
No 137
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.74 E-value=3.3 Score=39.30 Aligned_cols=136 Identities=17% Similarity=0.135 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHhcCCcEEEEEecCC--CCCCCCCcEEEec-ccCcccccccCceeEEEecCCcchHHHHHhcCCceeec-
Q psy11555 273 SDKRKAFLRAFEQIPQRVIWKWEGE--NMSGKIDKILLKS-WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGI- 348 (484)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~i~~~~~~--~~~~~~~nv~~~~-~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~- 348 (484)
.+.+..+++.|.+.+ .++.....+ +..+.-+|+.+.+ -+...+|| -.++++|+-||. .--||...|+|.|.+
T Consensus 203 ~~~~~~li~~l~k~g-iV~ipr~~~~~eife~~~n~i~pk~~vD~l~Ll--yya~lvig~ggT-MarEaAlLGtpaIs~~ 278 (346)
T COG1817 203 ISVLPDLIKELKKYG-IVLIPREKEQAEIFEGYRNIIIPKKAVDTLSLL--YYATLVIGAGGT-MAREAALLGTPAISCY 278 (346)
T ss_pred hhhHHHHHHHHHhCc-EEEecCchhHHHHHhhhccccCCcccccHHHHH--hhhheeecCCch-HHHHHHHhCCceEEec
Confidence 344666777777666 233222221 1112223333322 23345577 678899988873 567999999999965
Q ss_pred cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 349 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 349 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
|- .-..--+...+.|. ..... ++.++.+.+.+.|.++..++. -..+-.++.+..++.+|..++.
T Consensus 279 pG--kll~vdk~lie~G~--~~~s~--~~~~~~~~a~~~l~~~~~kK~-------~~~k~e~~~~~ii~~ve~~~e~ 342 (346)
T COG1817 279 PG--KLLAVDKYLIEKGL--LYHST--DEIAIVEYAVRNLKYRRLKKT-------GVLKLEDPTRLIIDVVEEMLET 342 (346)
T ss_pred CC--ccccccHHHHhcCc--eeecC--CHHHHHHHHHHHhhchhhccc-------cccccccHHHHHHHHHHHHhhh
Confidence 42 11122244455554 44322 333444444444434432221 1111146778888888887765
No 138
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=94.66 E-value=1.3 Score=45.40 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=65.5
Q ss_pred ecccCcccccc-cCceeEEEec---CC-cchHHHHHhcCCc----eeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHH
Q psy11555 309 KSWAPQRDILD-HPNVKVFISH---GG-FLGTTEALYSGVP----IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 379 (484)
Q Consensus 309 ~~~~pq~~ll~-h~~~~~~Ith---gG-~~s~~Eal~~gvP----~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 379 (484)
.+.+++.++.+ ...+|+|+.- -| ..++.||+++|+| +|+--..+- +..+ +.|+.+++. +.++
T Consensus 341 ~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l---~~gllVnP~--d~~~ 411 (456)
T TIGR02400 341 NRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL---NGALLVNPY--DIDG 411 (456)
T ss_pred cCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh---CCcEEECCC--CHHH
Confidence 34566666543 2678888853 24 4578999999999 776655542 2222 358888776 7899
Q ss_pred HHHHHHHHhCCH--HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 380 VLVALRTVLGNP--SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 380 l~~ai~~~l~~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++++|.++|+++ +.+++++++.+.... ..+.+|.+..+.
T Consensus 412 lA~aI~~aL~~~~~er~~r~~~~~~~v~~------~~~~~W~~~~l~ 452 (456)
T TIGR02400 412 MADAIARALTMPLEEREERHRAMMDKLRK------NDVQRWREDFLS 452 (456)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHhh------CCHHHHHHHHHH
Confidence 999999999753 345555555555433 234566666553
No 139
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.38 E-value=0.99 Score=43.24 Aligned_cols=89 Identities=27% Similarity=0.455 Sum_probs=58.1
Q ss_pred CCcEEEecccCcc---cccccCceeEEEec---CCc-chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCC
Q psy11555 303 IDKILLKSWAPQR---DILDHPNVKVFISH---GGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 375 (484)
Q Consensus 303 ~~nv~~~~~~pq~---~ll~h~~~~~~Ith---gG~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 375 (484)
.+++.+.+++++. .++ ..+++++.. .|. .++.||+++|+|+|.....+ ....+...+.|......
T Consensus 256 ~~~v~~~g~~~~~~~~~~~--~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~----~~e~~~~~~~g~~~~~~-- 327 (381)
T COG0438 256 EDNVKFLGYVPDEELAELL--ASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGG----IPEVVEDGETGLLVPPG-- 327 (381)
T ss_pred CCcEEEecccCHHHHHHHH--HhCCEEEeccccccchHHHHHHHhcCCcEEECCCCC----hHHHhcCCCceEecCCC--
Confidence 4678888888832 333 446677665 244 34699999999998865432 33334444356644333
Q ss_pred CHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 376 TEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 376 ~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
+.+++.+++..++++++.++...+
T Consensus 328 ~~~~~~~~i~~~~~~~~~~~~~~~ 351 (381)
T COG0438 328 DVEELADALEQLLEDPELREELGE 351 (381)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 689999999999988755555444
No 140
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=94.08 E-value=0.075 Score=41.56 Aligned_cols=64 Identities=13% Similarity=0.153 Sum_probs=46.8
Q ss_pred cchHHHhhhcC-ceEEEEeecceeccCCCCh--HHHHHHHHHHhcCCcEEEEEecCCC---CCCCCCcEE
Q psy11555 244 NDIKKFLDESV-NGVIYFSMGSIIQGKSFPS--DKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKIL 307 (484)
Q Consensus 244 ~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~--~~~~~~~~a~~~~~~~~i~~~~~~~---~~~~~~nv~ 307 (484)
..+..|+.... ++-|.+++|+......... ..+..++++++.++..++...+... +..+|+||+
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~lP~nVR 97 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELGELPDNVR 97 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCCS-TTTEE
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhCCCCCCCC
Confidence 44556776654 8899999999965211122 5789999999999999999888743 456888885
No 141
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=93.56 E-value=0.37 Score=48.96 Aligned_cols=121 Identities=14% Similarity=0.262 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHhcCCc-EEEEEecCC------CCCCCCCcEEE-ecccC-c-ccccccCceeEEEecCC--cchHHHHHh
Q psy11555 273 SDKRKAFLRAFEQIPQ-RVIWKWEGE------NMSGKIDKILL-KSWAP-Q-RDILDHPNVKVFISHGG--FLGTTEALY 340 (484)
Q Consensus 273 ~~~~~~~~~a~~~~~~-~~i~~~~~~------~~~~~~~nv~~-~~~~p-q-~~ll~h~~~~~~IthgG--~~s~~Eal~ 340 (484)
.+.++.+..+..++|. ++-...+.+ .+... +|+.. .++.+ + .+++....+-+-|+||+ ..++.||+.
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te~s~kL~~L~~y-~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~ 369 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTEMSSKLMSLDKY-DNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFE 369 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCcccHHHHHHHhc-CCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHH
Confidence 4667888888888876 544344433 12223 55554 45566 3 35663333444467766 578999999
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH-HHHHHHHHHH
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS-YKKRAEKVAR 402 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~-~~~~a~~~~~ 402 (484)
+|+|+++.-.... +...+.. |.+++.. +.+++.++|.++|+|++ +++...+-.+
T Consensus 370 ~G~pI~afd~t~~---~~~~i~~---g~l~~~~--~~~~m~~~i~~lL~d~~~~~~~~~~q~~ 424 (438)
T TIGR02919 370 YNLLILGFEETAH---NRDFIAS---ENIFEHN--EVDQLISKLKDLLNDPNQFRELLEQQRE 424 (438)
T ss_pred cCCcEEEEecccC---CcccccC---CceecCC--CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9999998643211 1122222 5566555 68999999999999985 4444444333
No 142
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=92.67 E-value=0.47 Score=40.98 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=24.9
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAH 129 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~ 129 (484)
.+.+.++ ..++|+|.+......+...++-. ++|.+......
T Consensus 71 ~~~~~i~-~~~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~ 111 (177)
T PF13439_consen 71 RLRRLIK-KEKPDIVHIHGPPAFWIALLACR-KVPIVYTIHGP 111 (177)
T ss_dssp HHHHHHH-HHT-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HH
T ss_pred HHHHHHH-HcCCCeEEecccchhHHHHHhcc-CCCEEEEeCCC
Confidence 3566676 66999997776533334434444 99998876543
No 143
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=92.66 E-value=1.2 Score=48.82 Aligned_cols=95 Identities=13% Similarity=0.145 Sum_probs=57.7
Q ss_pred EEEecccCcccccc-cCceeEEEecC---C-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHH
Q psy11555 306 ILLKSWAPQRDILD-HPNVKVFISHG---G-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETV 380 (484)
Q Consensus 306 v~~~~~~pq~~ll~-h~~~~~~Ithg---G-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 380 (484)
+.+.+++++.++.+ +..+++|+... | ..++.||+++|+|-.+.|+..+-..-+. +..-|+.+++. +.+++
T Consensus 344 ~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~---~l~~~llv~P~--d~~~l 418 (726)
T PRK14501 344 HYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA---ELAEALLVNPN--DIEGI 418 (726)
T ss_pred EEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhH---HhCcCeEECCC--CHHHH
Confidence 34556788776554 36788887542 3 4578999999775222222111111111 11237888876 78999
Q ss_pred HHHHHHHhCCH--HHHHHHHHHHHHHh
Q psy11555 381 LVALRTVLGNP--SYKKRAEKVARLFQ 405 (484)
Q Consensus 381 ~~ai~~~l~~~--~~~~~a~~~~~~~~ 405 (484)
+++|.++|+++ +.+++++++.+..+
T Consensus 419 a~ai~~~l~~~~~e~~~r~~~~~~~v~ 445 (726)
T PRK14501 419 AAAIKRALEMPEEEQRERMQAMQERLR 445 (726)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99999999853 45555555555543
No 144
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=92.52 E-value=5.3 Score=37.76 Aligned_cols=72 Identities=14% Similarity=0.177 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhcCC-cEEEEEecCCC--------CC---CCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhc
Q psy11555 274 DKRKAFLRAFEQIP-QRVIWKWEGEN--------MS---GKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS 341 (484)
Q Consensus 274 ~~~~~~~~a~~~~~-~~~i~~~~~~~--------~~---~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~ 341 (484)
...+.+..+.+..| .+++++--+.. .. .....+.+.+-.+-.+++ .+++.+||-.+. +-.||+.+
T Consensus 141 ~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll--~~s~~VvtinSt-vGlEAll~ 217 (269)
T PF05159_consen 141 DFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELL--EQSDAVVTINST-VGLEALLH 217 (269)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHH--HhCCEEEEECCH-HHHHHHHc
Confidence 34455555555554 47777755411 11 123344555667777888 678999998874 77999999
Q ss_pred CCceeec
Q psy11555 342 GVPIIGI 348 (484)
Q Consensus 342 gvP~i~~ 348 (484)
|+|++++
T Consensus 218 gkpVi~~ 224 (269)
T PF05159_consen 218 GKPVIVF 224 (269)
T ss_pred CCceEEe
Confidence 9999986
No 145
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=92.51 E-value=0.88 Score=46.14 Aligned_cols=85 Identities=13% Similarity=0.278 Sum_probs=65.2
Q ss_pred cccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEE-ecCCCCCHHHHHHHHHHHhCC-HHH
Q psy11555 316 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGN-PSY 393 (484)
Q Consensus 316 ~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~~l~~-~~~ 393 (484)
.++ .+|+++|..= +.++.-|+..|+|.+++++ | +-....+++.|.... ++.++++.++|.+.+.++++| +.+
T Consensus 323 ~iI--s~~dl~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~~~ 396 (426)
T PRK10017 323 KIL--GACELTVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPAL 396 (426)
T ss_pred HHH--hhCCEEEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHHHH
Confidence 455 6788888654 4468889999999999988 3 344455688888755 778889999999999999988 457
Q ss_pred HHHHHHHHHHHhC
Q psy11555 394 KKRAEKVARLFQD 406 (484)
Q Consensus 394 ~~~a~~~~~~~~~ 406 (484)
+++.++..+.++.
T Consensus 397 ~~~l~~~v~~~r~ 409 (426)
T PRK10017 397 NARLAEAVSRERQ 409 (426)
T ss_pred HHHHHHHHHHHHH
Confidence 7777766666655
No 146
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=91.54 E-value=1.8 Score=37.74 Aligned_cols=37 Identities=22% Similarity=0.025 Sum_probs=26.0
Q ss_pred HHHhhcCCCccEEEEcccchhhHHHHHHHh-CCCEEEEe
Q psy11555 89 LDLLHSSKKYDLIITEVFNTDCFLGFVYKF-KVPYIAVS 126 (484)
Q Consensus 89 ~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l-~iP~i~~~ 126 (484)
+++.++...||+|+.+.. .-.++-+-+.+ ++|+|...
T Consensus 58 ~~L~~~Gf~PDvI~~H~G-WGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 58 RQLRAQGFVPDVIIAHPG-WGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHcCCCCCEEEEcCC-cchhhhHHHhCCCCcEEEEE
Confidence 344434567899999976 34556678888 89988754
No 147
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.78 E-value=2.5 Score=40.90 Aligned_cols=162 Identities=14% Similarity=0.182 Sum_probs=89.2
Q ss_pred hccccEEEEeccCCCCCCCCCCCceEE-EcccccCCCCCCccchHHH---hhhcCceEEEEeecceeccCCCChHHHHHH
Q psy11555 204 ARNTSLVLVNSHFTFIGSRPYPNNVIE-VAGLHVKSPQPLPNDIKKF---LDESVNGVIYFSMGSIIQGKSFPSDKRKAF 279 (484)
Q Consensus 204 ~~~~~l~l~ns~~~l~~~~p~~p~v~~-vG~~~~~~~~~l~~~l~~~---l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~ 279 (484)
....|+++++.|..+ +..||++. .|.++.-.+..+.++-.+| +...+++.+.|-.|+..+......+....+
T Consensus 95 ~~~FDlvi~p~HD~~----~~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l 170 (311)
T PF06258_consen 95 PRPFDLVIVPEHDRL----PRGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERL 170 (311)
T ss_pred ccccCEEEECcccCc----CCCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHH
Confidence 345678888766533 13456543 4555544333333333333 333346778888887765556666644444
Q ss_pred HHH----HhcCCcEEEEEecCCC----------CCCCCCcEEEeccc---CcccccccCceeEEEecCCcchHHHHHhcC
Q psy11555 280 LRA----FEQIPQRVIWKWEGEN----------MSGKIDKILLKSWA---PQRDILDHPNVKVFISHGGFLGTTEALYSG 342 (484)
Q Consensus 280 ~~a----~~~~~~~~i~~~~~~~----------~~~~~~nv~~~~~~---pq~~ll~h~~~~~~IthgG~~s~~Eal~~g 342 (484)
++. .+..+.++....+... ..+..+.+.+.+-- |..++|+. .-.++||--..+.+.||+..|
T Consensus 171 ~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~-ad~i~VT~DSvSMvsEA~~tG 249 (311)
T PF06258_consen 171 LDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAA-ADAIVVTEDSVSMVSEAAATG 249 (311)
T ss_pred HHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHh-CCEEEEcCccHHHHHHHHHcC
Confidence 443 3344445555544311 11123344333322 34466643 233556666678899999999
Q ss_pred CceeeccCCCchHH----HHHHHHHcCcEEEec
Q psy11555 343 VPIIGIPMFGDQKA----NIRVVEKAGFGVTLP 371 (484)
Q Consensus 343 vP~i~~P~~~dQ~~----na~~~~~~G~g~~l~ 371 (484)
+|+.++|.-. +.. -.+.+++.|.-..++
T Consensus 250 ~pV~v~~l~~-~~~r~~r~~~~L~~~g~~r~~~ 281 (311)
T PF06258_consen 250 KPVYVLPLPG-RSGRFRRFHQSLEERGAVRPFT 281 (311)
T ss_pred CCEEEecCCC-cchHHHHHHHHHHHCCCEEECC
Confidence 9999998865 222 234556667766654
No 148
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=90.33 E-value=2 Score=47.42 Aligned_cols=88 Identities=10% Similarity=0.034 Sum_probs=55.5
Q ss_pred ccCcccccc-cCceeEEEecC---Ccc-hHHHHHhcCCc---eeeccCCCchHHHHHHHHHcC-cEEEecCCCCCHHHHH
Q psy11555 311 WAPQRDILD-HPNVKVFISHG---GFL-GTTEALYSGVP---IIGIPMFGDQKANIRVVEKAG-FGVTLPYDQITEETVL 381 (484)
Q Consensus 311 ~~pq~~ll~-h~~~~~~Ithg---G~~-s~~Eal~~gvP---~i~~P~~~dQ~~na~~~~~~G-~g~~l~~~~~~~~~l~ 381 (484)
.+|..++.+ +..+++|+.-. |.| +..|++++|+| ++++.-++. .+.. .| .|+.+++. +.++++
T Consensus 363 ~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G---~~~~---l~~~allVnP~--D~~~lA 434 (797)
T PLN03063 363 SVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG---AGQS---LGAGALLVNPW--NITEVS 434 (797)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcC---chhh---hcCCeEEECCC--CHHHHH
Confidence 445544432 36788888543 554 67899999999 444443321 1221 23 68889876 789999
Q ss_pred HHHHHHhC-CHHH-HHHHHHHHHHHhC
Q psy11555 382 VALRTVLG-NPSY-KKRAEKVARLFQD 406 (484)
Q Consensus 382 ~ai~~~l~-~~~~-~~~a~~~~~~~~~ 406 (484)
++|.++|+ +++. +++.+++.+..+.
T Consensus 435 ~AI~~aL~m~~~er~~r~~~~~~~v~~ 461 (797)
T PLN03063 435 SAIKEALNMSDEERETRHRHNFQYVKT 461 (797)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhhh
Confidence 99999998 5444 4445555555544
No 149
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=89.97 E-value=1.6 Score=45.55 Aligned_cols=77 Identities=10% Similarity=0.061 Sum_probs=46.8
Q ss_pred CceeEEEecC---C-cchHHHHHhcCCceeeccCCC-chHHHHHHHHHc--CcEEEecCCC-----CCHHHHHHHHHHHh
Q psy11555 321 PNVKVFISHG---G-FLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKA--GFGVTLPYDQ-----ITEETVLVALRTVL 388 (484)
Q Consensus 321 ~~~~~~Ithg---G-~~s~~Eal~~gvP~i~~P~~~-dQ~~na~~~~~~--G~g~~l~~~~-----~~~~~l~~ai~~~l 388 (484)
..|++|+... | ..++.||+++|+|+|+....+ .. .+..+... ..|+.+.... -+.++|+++|.+++
T Consensus 473 ~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~--~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~ 550 (590)
T cd03793 473 RGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGC--FMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC 550 (590)
T ss_pred hhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhh--hhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh
Confidence 6788888732 2 458999999999999976643 11 11222222 2577664221 24577888888888
Q ss_pred CCHHHHHHHHHH
Q psy11555 389 GNPSYKKRAEKV 400 (484)
Q Consensus 389 ~~~~~~~~a~~~ 400 (484)
+. +.++++.+.
T Consensus 551 ~~-~~r~~~~~r 561 (590)
T cd03793 551 QL-SRRQRIIQR 561 (590)
T ss_pred CC-cHHHHHHHH
Confidence 43 444444433
No 150
>KOG0853|consensus
Probab=89.83 E-value=0.22 Score=50.59 Aligned_cols=65 Identities=20% Similarity=0.213 Sum_probs=49.7
Q ss_pred chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy11555 333 LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 333 ~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~ 401 (484)
-++.|||++|+|+++.--.| =++-++..-.|..+++..-....+++++.++.+|++++.++.+-+
T Consensus 380 iv~IEAMa~glPvvAt~~GG----P~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~~~~~~G 444 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATNNGG----PAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWARMGKNG 444 (495)
T ss_pred ceeHHHHhcCCCEEEecCCC----ceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 48999999999999864433 455566666788888743333479999999999999988887654
No 151
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=88.87 E-value=9.9 Score=39.27 Aligned_cols=106 Identities=8% Similarity=0.034 Sum_probs=70.6
Q ss_pred cEEEecccCcccccc-cCceeEEEe---cCCcch-HHHHHhcCC----ceeeccCCCchHHHHHHHHHcCcEEEecCCCC
Q psy11555 305 KILLKSWAPQRDILD-HPNVKVFIS---HGGFLG-TTEALYSGV----PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 375 (484)
Q Consensus 305 nv~~~~~~pq~~ll~-h~~~~~~It---hgG~~s-~~Eal~~gv----P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 375 (484)
-+.+.+.+|+.++.+ +..+|+++. .-|+|- ..|.++++. |+|+--+.+ | .+...-|+.+++.
T Consensus 363 v~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----a--a~~l~~AllVNP~-- 433 (487)
T TIGR02398 363 LQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----A--AVELKGALLTNPY-- 433 (487)
T ss_pred EEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEecccc-----c--hhhcCCCEEECCC--
Confidence 356667788877664 356777763 457775 469999988 666544443 1 1444558889876
Q ss_pred CHHHHHHHHHHHhCCHH--HHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 376 TEETVLVALRTVLGNPS--YKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 376 ~~~~l~~ai~~~l~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
+.++++++|.+.|+.+. -+++++++.+.++. ..+.+|.+..+..
T Consensus 434 d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~------~d~~~W~~~fl~~ 479 (487)
T TIGR02398 434 DPVRMDETIYVALAMPKAEQQARMREMFDAVNY------YDVQRWADEFLAA 479 (487)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh------CCHHHHHHHHHHH
Confidence 78999999999997653 44555555554443 2467888877753
No 152
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=87.29 E-value=13 Score=34.58 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=27.9
Q ss_pred ccCcccccccCceeEEEecC-CcchHHHHHhcCCceeec
Q psy11555 311 WAPQRDILDHPNVKVFISHG-GFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 311 ~~pq~~ll~h~~~~~~Ithg-G~~s~~Eal~~gvP~i~~ 348 (484)
+=|..++| .++|.+|.-. ..|.+.||.+.|+|+-++
T Consensus 235 ~NPY~~~L--a~Adyii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 235 YNPYIDML--AAADYIISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CCchHHHH--hhcceEEEecchhhhhHHHhccCCCeEEE
Confidence 33777888 6788877555 467789999999999764
No 153
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.88 E-value=5.6 Score=37.65 Aligned_cols=92 Identities=23% Similarity=0.362 Sum_probs=57.9
Q ss_pred ecccCcccccccCceeEEEecCC--------------cc-hHHHHHhcCCceeeccCCCchHH--HHHHHHH-cCcEEEe
Q psy11555 309 KSWAPQRDILDHPNVKVFISHGG--------------FL-GTTEALYSGVPIIGIPMFGDQKA--NIRVVEK-AGFGVTL 370 (484)
Q Consensus 309 ~~~~pq~~ll~h~~~~~~IthgG--------------~~-s~~Eal~~gvP~i~~P~~~dQ~~--na~~~~~-~G~g~~l 370 (484)
.+|-|..|++...+|.+..+.-- .| .+-.++-.|||+|.+|-.+-|+. -|++-.+ .|+.+.+
T Consensus 282 ~gWq~~ad~~~kdnc~l~lsqqsfadiLH~adaalgmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltl 361 (412)
T COG4370 282 QGWQPLADRFGKDNCSLWLSQQSFADILHAADAALGMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTL 361 (412)
T ss_pred cCcchhhhhhccCceEEEEeHHHHHHHHHHHHHHHHhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeee
Confidence 45666666555455555544322 22 34446678999999999998875 4444444 4888886
Q ss_pred cCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 371 PYDQITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 371 ~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
-.+ ....=..+..+++.|+.+.+..+.-..
T Consensus 362 v~~--~aq~a~~~~q~ll~dp~r~~air~nGq 391 (412)
T COG4370 362 VRP--EAQAAAQAVQELLGDPQRLTAIRHNGQ 391 (412)
T ss_pred cCC--chhhHHHHHHHHhcChHHHHHHHhcch
Confidence 543 333334445559999998888775443
No 154
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=84.21 E-value=5.9 Score=39.34 Aligned_cols=137 Identities=17% Similarity=0.104 Sum_probs=76.0
Q ss_pred HHHHHHHHhcCCcEEEEEecC---CCC---CCCCCcEEEecc-cCcccccccCceeEEEecCCcchHHHHHhcCCceeec
Q psy11555 276 RKAFLRAFEQIPQRVIWKWEG---ENM---SGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 276 ~~~~~~a~~~~~~~~i~~~~~---~~~---~~~~~nv~~~~~-~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
.+.+. .+.+.+..++++.-+ ... ....+++..... .+-.++| ..+++.||--. ..+.|.+..++|+|..
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~~~~~~ll--~~aDiLITDyS-Si~fD~~~l~KPiify 294 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDNEDIYDLL--AAADILITDYS-SIIFDFLLLNKPIIFY 294 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHHHHTT----TT-TTTEEE-TT-S-HHHHH--HT-SEEEESS--THHHHHGGGT--EEEE
T ss_pred HHHHH-HHhCCCcEEEEEeCchhhhchhhhhccCCcEEECCCCCCHHHHH--HhcCEEEEech-hHHHHHHHhCCCEEEE
Confidence 34444 455556666766543 111 234567766543 3456788 67999999985 4789999999999987
Q ss_pred cCCCchHHHH----HHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHhC-CCCChHHHHHHHHH
Q psy11555 349 PMFGDQKANI----RVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS-YKKRAEKVARLFQD-RPMPPLDTAIYWIE 420 (484)
Q Consensus 349 P~~~dQ~~na----~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~-~~~~a~~~~~~~~~-~~~~~~~~~~~~ie 420 (484)
..-.|+.... .-.++...|..+. +.++|.++|+.+++++. ++++.++..+.+.. ...++.++++++|.
T Consensus 295 ~~D~~~Y~~~rg~~~~~~~~~pg~~~~----~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 295 QPDLEEYEKERGFYFDYEEDLPGPIVY----NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYIF 368 (369)
T ss_dssp -TTTTTTTTTSSBSS-TTTSSSS-EES----SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHHH
T ss_pred eccHHHHhhccCCCCchHhhCCCceeC----CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHh
Confidence 5544433111 0012233444442 68999999999887654 45566666666633 22466777776664
No 155
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=76.96 E-value=14 Score=35.35 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhc----CCceeec
Q psy11555 273 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS----GVPIIGI 348 (484)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~----gvP~i~~ 348 (484)
.+.++.+.+.+++.+..+.+......... ..+.. ..+..++. ..++++|+-||=||+.+++.. ++|++++
T Consensus 20 ~e~~~~i~~~L~~~g~~v~v~~~~~~~~~-~~~~~---~~~~~~~~--~~~d~vi~~GGDGt~l~~~~~~~~~~~pilGI 93 (291)
T PRK02155 20 AEPLESLAAFLAKRGFEVVFEADTARNIG-LTGYP---ALTPEEIG--ARADLAVVLGGDGTMLGIGRQLAPYGVPLIGI 93 (291)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcC-ccccc---ccChhHhc--cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEE
Confidence 45567777777777777665322110000 00000 01212222 357999999999999999774 6898887
Q ss_pred cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 349 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 349 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
... .+|... +.+.+++.++|+++++++
T Consensus 94 n~G-------------~lGFL~---~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 94 NHG-------------RLGFIT---DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred cCC-------------Cccccc---cCCHHHHHHHHHHHHcCC
Confidence 532 245444 346788999999988543
No 156
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=76.53 E-value=7.6 Score=37.65 Aligned_cols=125 Identities=12% Similarity=0.145 Sum_probs=74.7
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC-C------CCCCCCcEEEecc--cCc-ccccccCcee
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSW--APQ-RDILDHPNVK 324 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~-~------~~~~~~nv~~~~~--~pq-~~ll~h~~~~ 324 (484)
++.|.+..|+.......|.+...++++.+.+.+.++++..+++ + ..+.-++..+.+- +++ ..++ .+|+
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali--~~a~ 256 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALL--AGAD 256 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHH--HcCC
Confidence 4677777776555567888888888888876566766654432 1 1111112223332 222 3455 6799
Q ss_pred EEEecCCcchHHHHHhcCCceeec--cCCCch----HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 325 VFISHGGFLGTTEALYSGVPIIGI--PMFGDQ----KANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 325 ~~IthgG~~s~~Eal~~gvP~i~~--P~~~dQ----~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
++|+.=. |.++=|.+.|+|+|++ |....+ ..+...+. + -..++++++++.+|++++|
T Consensus 257 l~I~~DS-gp~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~----~--~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 257 AVVGVDT-GLTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALL----G--ESGANPTPDEVLAALEELL 319 (319)
T ss_pred EEEeCCC-hHHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEc----c--CccCCCCHHHHHHHHHhhC
Confidence 9999875 5788888999999986 321111 00111111 0 0146789999999998765
No 157
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=75.57 E-value=6.8 Score=38.12 Aligned_cols=126 Identities=17% Similarity=0.230 Sum_probs=71.0
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC-C------CCCCCCcEEEecc--cCc-ccccccCceeE
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSW--APQ-RDILDHPNVKV 325 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~-~------~~~~~~nv~~~~~--~pq-~~ll~h~~~~~ 325 (484)
+.|.+..|+.......|.+...++++.+.+.+.++++..|++ + ..+..+++.+.+- +.+ ..++ .++++
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali--~~a~l 256 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVL--AGAKA 256 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHH--HhCCE
Confidence 455444454433356788888888887766566665543431 1 1111123333332 222 2445 67999
Q ss_pred EEecCCcchHHHHHhcCCceeec--cCC----CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 326 FISHGGFLGTTEALYSGVPIIGI--PMF----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 326 ~IthgG~~s~~Eal~~gvP~i~~--P~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
+|+.-. |.++=|.+.|+|+|++ |.. +....|...+... +.+ ..+++++++.++++++|
T Consensus 257 ~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~~~~--~~c--m~~I~~e~V~~~~~~~l 320 (322)
T PRK10964 257 VVSVDT-GLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHACRSP--GKS--MADLSAETVFQKLETLI 320 (322)
T ss_pred EEecCC-cHHHHHHHhCCCEEEEECCCCcccccCCCCCceeecCC--Ccc--cccCCHHHHHHHHHHHh
Confidence 999875 6889999999999987 331 1111111111110 112 25778899998888876
No 158
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=74.50 E-value=37 Score=33.13 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=59.6
Q ss_pred CcEEE-ecccCcc---cccccCceeEEEe----cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCC
Q psy11555 304 DKILL-KSWAPQR---DILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 375 (484)
Q Consensus 304 ~nv~~-~~~~pq~---~ll~h~~~~~~It----hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 375 (484)
+|+.+ .+++|.. ++| .+|++.|- .=|.|++.-.+..|+|+++- .+-.--+.+.+.|+-+....+++
T Consensus 245 ~~~~iL~e~mpf~eYl~lL--~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~----~~np~~~~l~~~~ipVlf~~d~L 318 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALL--SRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS----RDNPFWQDLKEQGIPVLFYGDEL 318 (360)
T ss_pred cceeEhhhhCCHHHHHHHH--HhCCEEEEeechhhhHhHHHHHHHcCCeEEEe----cCChHHHHHHhCCCeEEeccccC
Confidence 46765 4688755 466 67777764 35799999999999999973 33334467778888888877899
Q ss_pred CHHHHHHHHHHHh
Q psy11555 376 TEETVLVALRTVL 388 (484)
Q Consensus 376 ~~~~l~~ai~~~l 388 (484)
+...+.+|=+++.
T Consensus 319 ~~~~v~ea~rql~ 331 (360)
T PF07429_consen 319 DEALVREAQRQLA 331 (360)
T ss_pred CHHHHHHHHHHHh
Confidence 9999998888775
No 159
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=74.24 E-value=6.3 Score=37.15 Aligned_cols=54 Identities=20% Similarity=0.162 Sum_probs=41.1
Q ss_pred ceeEEEecCCcchHHHHHh------cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALY------SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~------~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+-||=||++.|+. .++|++++... .+|... +.+.+++.++++++++++
T Consensus 35 ~~Dlvi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G-------------~lGFL~---~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 35 NPDIVISVGGDGTLLSAFHRYENQLDKVRFVGVHTG-------------HLGFYT---DWRPFEVDKLVIALAKDP 94 (265)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCCeEEEEeCC-------------Cceecc---cCCHHHHHHHHHHHHcCC
Confidence 4689999999999999976 48899987542 245544 346788888998888643
No 160
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=73.38 E-value=4.4 Score=35.51 Aligned_cols=28 Identities=11% Similarity=0.061 Sum_probs=19.9
Q ss_pred ChhhhcCCeEEEEeecCCCCCC-CCceEE
Q psy11555 1 MGLTDHGHVVDILSHFPQSSKI-PNYNDI 28 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~~~~-~~~~~i 28 (484)
++..+|||+||-+...+.+... ++++..
T Consensus 18 ~EA~~RGHeVTAivRn~~K~~~~~~~~i~ 46 (211)
T COG2910 18 KEALKRGHEVTAIVRNASKLAARQGVTIL 46 (211)
T ss_pred HHHHhCCCeeEEEEeChHhccccccceee
Confidence 3678999999999998765433 444433
No 161
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=70.87 E-value=19 Score=31.00 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=52.1
Q ss_pred cchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCC--CCCcEEEecc-cCccccccc
Q psy11555 244 NDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSG--KIDKILLKSW-APQRDILDH 320 (484)
Q Consensus 244 ~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~--~~~nv~~~~~-~pq~~ll~h 320 (484)
.++-+++.+. +..+++ |+. .-.+..+.++..+.+-+++=......... ..+.....++ .+.+.++.
T Consensus 21 ~~lg~~La~~--g~~lv~-Gg~-------~GlM~a~a~ga~~~gg~viGVlp~~l~~~~~~~~~~i~~~~~~~Rk~~m~- 89 (159)
T TIGR00725 21 YRLGKELAKK--GHILIN-GGR-------TGVMEAVSKGAREAGGLVVGILPDEDFAGNPYLTIKVKTGMNFARNFILV- 89 (159)
T ss_pred HHHHHHHHHC--CCEEEc-CCc-------hhHHHHHHHHHHHCCCeEEEECChhhccCCCCceEEEECCCcchHHHHHH-
Confidence 3445556554 456666 554 13456666665555555554444322111 1122223344 45556654
Q ss_pred CceeEE-EecCCcchH---HHHHhcCCceeeccC
Q psy11555 321 PNVKVF-ISHGGFLGT---TEALYSGVPIIGIPM 350 (484)
Q Consensus 321 ~~~~~~-IthgG~~s~---~Eal~~gvP~i~~P~ 350 (484)
..+++| +--||.||+ .|++.+++|+++++.
T Consensus 90 ~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 90 RSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred HHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 344455 456777875 556889999999875
No 162
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=67.68 E-value=7.7 Score=36.78 Aligned_cols=91 Identities=13% Similarity=0.165 Sum_probs=56.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC------C-C-CCcE-EEeccc--Cc-ccccccCc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS------G-K-IDKI-LLKSWA--PQ-RDILDHPN 322 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~------~-~-~~nv-~~~~~~--pq-~~ll~h~~ 322 (484)
++.|.+..|+.......+.+....+++.+.+.+.++++..++++.. + . ..++ .+.+-. .+ ..++ .+
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li--~~ 198 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALL--AR 198 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHH--Hh
Confidence 3567777777655456777788888887776666766654432211 0 1 1122 122221 11 3445 67
Q ss_pred eeEEEecCCcchHHHHHhcCCceeec
Q psy11555 323 VKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 323 ~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
++++|+.-. |.++=|.+.|+|++++
T Consensus 199 ~~l~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 199 ADLVVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred CCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 999999864 5777778999999987
No 163
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=67.29 E-value=6.9 Score=36.24 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=56.1
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC---------CCCCCC-cEEEecccC--c-cccccc
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---------MSGKID-KILLKSWAP--Q-RDILDH 320 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~---------~~~~~~-nv~~~~~~p--q-~~ll~h 320 (484)
+++.|.+..|+.......+.+....+++.+.+.++++++..++++ ....+. .+.+.+-.+ + ..++
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali-- 181 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALI-- 181 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHH--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHH--
Confidence 457888888887766778999999999999888777776665533 111121 333433322 2 2455
Q ss_pred CceeEEEecCCcchHHHHHhcCCceeec
Q psy11555 321 PNVKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
.+++++|+.-+ |.++=|.+.|+|+|++
T Consensus 182 ~~a~~~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 SRADLVIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HTSSEEEEESS-HHHHHHHHTT--EEEE
T ss_pred hcCCEEEecCC-hHHHHHHHHhCCEEEE
Confidence 67899998876 5888999999999997
No 164
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=65.90 E-value=12 Score=36.06 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=42.9
Q ss_pred CceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 321 PNVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..++++|+=||=||++.|... ++|++++.... +|...+ ...+++.+++++++++.
T Consensus 71 ~~~D~vi~lGGDGT~L~aar~~~~~~~PilGIN~G~-------------lGFL~~---~~~~~~~~~l~~i~~g~ 129 (306)
T PRK03372 71 DGCELVLVLGGDGTILRAAELARAADVPVLGVNLGH-------------VGFLAE---AEAEDLDEAVERVVDRD 129 (306)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhccCCCcEEEEecCC-------------Cceecc---CCHHHHHHHHHHHHcCC
Confidence 468999999999999988764 78999886532 566554 36788999999998654
No 165
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=64.55 E-value=11 Score=36.39 Aligned_cols=55 Identities=22% Similarity=0.223 Sum_probs=42.2
Q ss_pred CceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 321 PNVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..++++|+=||=||++.|... ++|++++-.. .+|... +.+.+++.++++++++++
T Consensus 67 ~~~Dlvi~iGGDGTlL~aar~~~~~~iPilGIN~G-------------~lGFLt---~~~~~~~~~~l~~l~~g~ 125 (305)
T PRK02649 67 SSMKFAIVLGGDGTVLSAARQLAPCGIPLLTINTG-------------HLGFLT---EAYLNQLDEAIDQVLAGQ 125 (305)
T ss_pred cCcCEEEEEeCcHHHHHHHHHhcCCCCcEEEEeCC-------------CCcccc---cCCHHHHHHHHHHHHcCC
Confidence 368999999999999998774 7899987542 245444 346788999999998654
No 166
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=63.54 E-value=38 Score=28.81 Aligned_cols=136 Identities=13% Similarity=0.231 Sum_probs=66.3
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcch--
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLG-- 334 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s-- 334 (484)
.|.|-+||. ......+.+...+++++..+-...-.. ...|+. +..++. -+.+..+++||+-+|...
T Consensus 2 ~V~Ii~gs~-----SD~~~~~~a~~~L~~~gi~~~~~V~sa--HR~p~~--l~~~~~---~~~~~~~~viIa~AG~~a~L 69 (150)
T PF00731_consen 2 KVAIIMGST-----SDLPIAEEAAKTLEEFGIPYEVRVASA--HRTPER--LLEFVK---EYEARGADVIIAVAGMSAAL 69 (150)
T ss_dssp EEEEEESSG-----GGHHHHHHHHHHHHHTT-EEEEEE--T--TTSHHH--HHHHHH---HTTTTTESEEEEEEESS--H
T ss_pred eEEEEeCCH-----HHHHHHHHHHHHHHHcCCCEEEEEEec--cCCHHH--HHHHHH---HhccCCCEEEEEECCCcccc
Confidence 456667777 346778888888988875433322210 011111 111111 112245789998888644
Q ss_pred --HHHHHhcCCceeeccCCCchHHH----HHHHHH-cCcEEEe-cCC-CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy11555 335 --TTEALYSGVPIIGIPMFGDQKAN----IRVVEK-AGFGVTL-PYD-QITEETVLVALRTVLGNPSYKKRAEKVARLFQ 405 (484)
Q Consensus 335 --~~Eal~~gvP~i~~P~~~dQ~~n----a~~~~~-~G~g~~l-~~~-~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~ 405 (484)
+..++. -+|+|++|...++... ...++- .|+++.. ..+ ..+..-+.-.|-. +.|++++++.+...+..+
T Consensus 70 pgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa-~~d~~l~~kl~~~~~~~~ 147 (150)
T PF00731_consen 70 PGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILA-LKDPELREKLRAYREKMK 147 (150)
T ss_dssp HHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHH
T ss_pred hhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHh-cCCHHHHHHHHHHHHHHH
Confidence 333333 6999999987654321 222222 2665442 222 1122223333322 357888888888777664
Q ss_pred C
Q psy11555 406 D 406 (484)
Q Consensus 406 ~ 406 (484)
+
T Consensus 148 ~ 148 (150)
T PF00731_consen 148 E 148 (150)
T ss_dssp H
T ss_pred c
Confidence 3
No 167
>PF15050 SCIMP: SCIMP protein
Probab=62.41 E-value=21 Score=28.59 Aligned_cols=26 Identities=19% Similarity=0.553 Sum_probs=16.2
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 438 LYWWQYILLDVIIALILLIAAMVWSI 463 (484)
Q Consensus 438 ~~~~~~~~lDv~~~~~~~~~~~~~~~ 463 (484)
|+||.-+.+=++++.++++.+.+.+|
T Consensus 1 M~WWr~nFWiiLAVaII~vS~~lglI 26 (133)
T PF15050_consen 1 MSWWRDNFWIILAVAIILVSVVLGLI 26 (133)
T ss_pred CchHHhchHHHHHHHHHHHHHHHHHH
Confidence 68888887777766554444444333
No 168
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=61.98 E-value=50 Score=31.00 Aligned_cols=84 Identities=15% Similarity=0.091 Sum_probs=55.7
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHh-cCCceeeccC
Q psy11555 272 PSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY-SGVPIIGIPM 350 (484)
Q Consensus 272 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~-~gvP~i~~P~ 350 (484)
..+..+.+.+-+.+.+..+.|..... +. . ..++++|+=||=||+..|.. .++|++++-.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~---------------~~---~--~~~d~vi~iGGDGT~L~a~~~~~~Pilgin~ 70 (256)
T PRK14075 11 KEKEAKFLKEKISKEHEVVEFCEASA---------------SG---K--VTADLIIVVGGDGTVLKAAKKVGTPLVGFKA 70 (256)
T ss_pred HHHHHHHHHHHHHHcCCeeEeecccc---------------cc---c--CCCCEEEEECCcHHHHHHHHHcCCCEEEEeC
Confidence 45566667776766666666542211 00 1 45789999999999988876 5788887753
Q ss_pred CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 351 FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 351 ~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.. .|... +.+.+++.++++++++.+
T Consensus 71 G~-------------lGfl~---~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 71 GR-------------LGFLS---SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CC-------------Ccccc---ccCHHHHHHHHHHHHcCC
Confidence 21 45444 346788889998888543
No 169
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=61.38 E-value=14 Score=35.30 Aligned_cols=55 Identities=16% Similarity=0.080 Sum_probs=41.0
Q ss_pred CceeEEEecCCcchHHHHHh----cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 321 PNVKVFISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~----~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..++++|+-||=||++.|.. .++|++++-... +|... +.+.+++.++++++++++
T Consensus 63 ~~~Dlvi~iGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFLt---~~~~~~~~~~l~~i~~g~ 121 (287)
T PRK14077 63 KISDFLISLGGDGTLISLCRKAAEYDKFVLGIHAGH-------------LGFLT---DITVDEAEKFFQAFFQGE 121 (287)
T ss_pred cCCCEEEEECCCHHHHHHHHHhcCCCCcEEEEeCCC-------------cccCC---cCCHHHHHHHHHHHHcCC
Confidence 35899999999999987765 378988875422 45443 346788999999988653
No 170
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=61.06 E-value=18 Score=34.73 Aligned_cols=54 Identities=26% Similarity=0.206 Sum_probs=42.3
Q ss_pred ceeEEEecCCcchHHHHHh----cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~----~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+=||=||++.|.. .++|++++-.. .+|...+ ++.+++.++++++++++
T Consensus 68 ~~D~vi~lGGDGT~L~aa~~~~~~~~PilGIN~G-------------~lGFL~~---~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 68 YCDLVAVLGGDGTFLSVAREIAPRAVPIIGINQG-------------HLGFLTQ---IPREYMTDKLLPVLEGK 125 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHhcccCCCEEEEecC-------------CCeEeec---cCHHHHHHHHHHHHcCC
Confidence 5899999999999998875 37899987542 2666653 46889999999998653
No 171
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=60.76 E-value=15 Score=35.21 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=41.5
Q ss_pred ceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+=||=||++.|... ++|++++-... +|... +.+.+++.+++++++++.
T Consensus 64 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGIN~G~-------------lGFLt---~~~~~~~~~~l~~i~~g~ 121 (292)
T PRK01911 64 SADMVISIGGDGTFLRTATYVGNSNIPILGINTGR-------------LGFLA---TVSKEEIEETIDELLNGD 121 (292)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEecCC-------------CCccc---ccCHHHHHHHHHHHHcCC
Confidence 58999999999999988773 78999875422 45444 346788999999998653
No 172
>KOG1111|consensus
Probab=59.71 E-value=1.1e+02 Score=30.10 Aligned_cols=89 Identities=13% Similarity=0.172 Sum_probs=52.7
Q ss_pred EEEeecceeccCCCChHHHHHHHHHHhcCCc-EEEEEecCCCC---------CCCCCcEEEecccCccc---ccccCcee
Q psy11555 258 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-RVIWKWEGENM---------SGKIDKILLKSWAPQRD---ILDHPNVK 324 (484)
Q Consensus 258 v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~-~~i~~~~~~~~---------~~~~~nv~~~~~~pq~~---ll~h~~~~ 324 (484)
..+..|... ..+.-+.+.+.+-+.+++.|. +|+...+|.+. ..+.+.+.+.+-+|+.+ +| -+-+
T Consensus 197 ~ivv~sRLv-yrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl--~~G~ 273 (426)
T KOG1111|consen 197 TIVVASRLV-YRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVL--VRGD 273 (426)
T ss_pred EEEEEeeee-eccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHH--hcCc
Confidence 333444443 223333444444555666665 88887766421 12578899999888764 34 3334
Q ss_pred EEEecC----CcchHHHHHhcCCceeecc
Q psy11555 325 VFISHG----GFLGTTEALYSGVPIIGIP 349 (484)
Q Consensus 325 ~~Ithg----G~~s~~Eal~~gvP~i~~P 349 (484)
+|+.-. =..++.||+.+|.|++..-
T Consensus 274 IFlntSlTEafc~~ivEAaScGL~VVsTr 302 (426)
T KOG1111|consen 274 IFLNTSLTEAFCMVIVEAASCGLPVVSTR 302 (426)
T ss_pred EEeccHHHHHHHHHHHHHHhCCCEEEEee
Confidence 555332 1246899999999999743
No 173
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=58.42 E-value=82 Score=32.61 Aligned_cols=127 Identities=15% Similarity=0.119 Sum_probs=75.1
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC-C--------CCCCCcEEEecccCc-ccccccCcee
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-M--------SGKIDKILLKSWAPQ-RDILDHPNVK 324 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~-~--------~~~~~nv~~~~~~pq-~~ll~h~~~~ 324 (484)
+++++..-|.... +-.-+.+..++..+-+...+++....++. + ...+.++.+.-|+.. ...+-|..++
T Consensus 293 ~~pl~~~vsRl~~--QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD 370 (487)
T COG0297 293 PGPLFGFVSRLTA--QKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGAD 370 (487)
T ss_pred CCcEEEEeecccc--ccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCC
Confidence 3455555555532 22333333333333333455544433321 1 124567777766653 2333357778
Q ss_pred EEE-----ecCCcchHHHHHhcCCceeeccCCC------chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 325 VFI-----SHGGFLGTTEALYSGVPIIGIPMFG------DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 325 ~~I-----thgG~~s~~Eal~~gvP~i~~P~~~------dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
.++ --||+ +-++||++|.+.|+.|..+ |-..++ .+..|.|..+... +++++..++++.+
T Consensus 371 ~~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~~gtGf~f~~~--~~~~l~~al~rA~ 440 (487)
T COG0297 371 VILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQGVGTGFLFLQT--NPDHLANALRRAL 440 (487)
T ss_pred EEEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccCceeEEEEecC--CHHHHHHHHHHHH
Confidence 876 45676 7889999999888888753 222222 5667888888644 9999999999876
No 174
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=58.31 E-value=16 Score=37.21 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=27.7
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
++.+.++ +.++|++|.+.. ...+|+++|+|++.++.
T Consensus 362 el~~~i~-~~~pdliig~~~----~~~~a~~~~ip~i~~~~ 397 (428)
T cd01965 362 DLESLAK-EEPVDLLIGNSH----GRYLARDLGIPLVRVGF 397 (428)
T ss_pred HHHHHhh-ccCCCEEEECch----hHHHHHhcCCCEEEecC
Confidence 4566676 778999999854 45689999999986553
No 175
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=57.46 E-value=16 Score=34.82 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHhcCCcEEEEEecC-CCCCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHh---cCCceeec
Q psy11555 273 SDKRKAFLRAFEQIPQRVIWKWEG-ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY---SGVPIIGI 348 (484)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~i~~~~~-~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~---~gvP~i~~ 348 (484)
.+..+.+.+.+++.+..+.+.-.. ........ .+..++. ...++++|+-||=||+.+++. .++|++++
T Consensus 15 ~~~~~~I~~~L~~~g~~v~v~~~~~~~~~~~~~-------~~~~~~~-~~~~d~vi~iGGDGTlL~a~~~~~~~~pi~gI 86 (277)
T PRK03708 15 LKLAYRVYDFLKVSGYEVVVDSETYEHLPEFSE-------EDVLPLE-EMDVDFIIAIGGDGTILRIEHKTKKDIPILGI 86 (277)
T ss_pred HHHHHHHHHHHHHCCCEEEEecchhhhcCcccc-------ccccccc-ccCCCEEEEEeCcHHHHHHHHhcCCCCeEEEE
Confidence 456777777777777776653111 11110000 0001111 125789999999999998874 35788888
Q ss_pred cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 349 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 349 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
|... .|..- +++.+++.+++.++++++
T Consensus 87 n~G~-------------lGFl~---~~~~~~~~~~l~~i~~g~ 113 (277)
T PRK03708 87 NMGT-------------LGFLT---EVEPEETFFALSRLLEGD 113 (277)
T ss_pred eCCC-------------CCccc---cCCHHHHHHHHHHHHcCC
Confidence 8633 23222 345788888888888553
No 176
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=57.38 E-value=34 Score=30.33 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=27.1
Q ss_pred HHHHhhcCCCccEEEEcccchhhHH--HHHHHhCCCEEEEeCCCC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTDCFL--GFVYKFKVPYIAVSAAHI 130 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~~~~--~~A~~l~iP~i~~~~~~~ 130 (484)
+...++ ..++|+|++......... ..+...++|++.......
T Consensus 43 ~~~~~~-~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~ 86 (229)
T cd01635 43 LLRILR-GFKPDVVHAHGYYPAPLALLLAARLLGIPLVLTVHGVN 86 (229)
T ss_pred HHHHHh-hcCCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEcCcc
Confidence 344554 579999999876422222 356677999887666543
No 177
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=57.20 E-value=14 Score=34.97 Aligned_cols=56 Identities=20% Similarity=0.242 Sum_probs=40.9
Q ss_pred ceeEEEecCCcchHHHHHh----cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 322 NVKVFISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~----~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
.++++|+=||=||++.|.. .++|++++-.. .+|...+ .+.+++.+++.+++++.+|
T Consensus 42 ~~d~vi~iGGDGT~L~aa~~~~~~~~PilgIn~G-------------~lGFL~~---~~~~~~~~~l~~~~~~g~~ 101 (272)
T PRK02231 42 RAQLAIVIGGDGNMLGRARVLAKYDIPLIGINRG-------------NLGFLTD---IDPKNAYEQLEACLERGEF 101 (272)
T ss_pred CCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------CCccccc---CCHHHHHHHHHHHHhcCCc
Confidence 5799999999999998755 36899887542 2555553 4678888888888863333
No 178
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=56.81 E-value=18 Score=34.18 Aligned_cols=54 Identities=30% Similarity=0.398 Sum_probs=41.0
Q ss_pred ceeEEEecCCcchHHHHHh-cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALY-SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~-~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+=||=||+..|.. .+.|++++-.. .+|... +.+.+++.++++++++++
T Consensus 52 ~~D~vi~lGGDGT~L~a~~~~~~PilGIN~G-------------~lGFL~---~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADVIITIGGDGTILRTLQRAKGPILGINMG-------------GLGFLT---EIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCEEEEEcCcHHHHHHHHHcCCCEEEEECC-------------CCccCc---ccCHHHHHHHHHHHHcCC
Confidence 5789999999999999887 45688876442 245444 457899999999999653
No 179
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=56.75 E-value=30 Score=36.22 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=28.4
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
++.+.++ ..+||++|.++. ...+|+++|+|++.++.
T Consensus 355 ei~~~i~-~~~pdliiG~~~----er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 355 EVADAIA-ALEPELVLGTQM----ERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHHHHHH-hcCCCEEEEChH----HHHHHHHcCCCEEEecC
Confidence 5667776 779999999853 45579999999987765
No 180
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=56.63 E-value=23 Score=33.37 Aligned_cols=55 Identities=15% Similarity=0.163 Sum_probs=41.1
Q ss_pred ceeEEEecCCcchHHHHHhc-----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALYS-----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~-----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+=||=||++.|+.. .+|++++...+ .+|..- +.+.+++.+++.++++++
T Consensus 39 ~~D~vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G------------~lGFL~---~~~~~~~~~~l~~i~~g~ 98 (264)
T PRK03501 39 NANIIVSIGGDGTFLQAVRKTGFREDCLYAGISTKD------------QLGFYC---DFHIDDLDKMIQAITKEE 98 (264)
T ss_pred CccEEEEECCcHHHHHHHHHhcccCCCeEEeEecCC------------CCeEcc---cCCHHHHHHHHHHHHcCC
Confidence 46899999999999999874 57877765522 355553 346788999999988653
No 181
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=56.04 E-value=27 Score=36.49 Aligned_cols=36 Identities=14% Similarity=0.108 Sum_probs=27.9
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
++.+.++ +.+||+||.+++ ...+|+++|||++.++.
T Consensus 365 ei~~~I~-~~~pdliiGs~~----er~ia~~lgiP~~~is~ 400 (513)
T CHL00076 365 EVGDMIA-RVEPSAIFGTQM----ERHIGKRLDIPCGVISA 400 (513)
T ss_pred HHHHHHH-hcCCCEEEECch----hhHHHHHhCCCEEEeec
Confidence 4677777 778999999854 34468999999987763
No 182
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=55.60 E-value=25 Score=36.12 Aligned_cols=55 Identities=22% Similarity=0.229 Sum_probs=41.8
Q ss_pred CceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 321 PNVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..++++|+=||=||++.|... ++|++++... .+|... +++.+++.++|.++++++
T Consensus 261 ~~~DlVIsiGGDGTlL~Aar~~~~~~iPILGIN~G-------------~LGFLt---~i~~~e~~~~Le~il~G~ 319 (508)
T PLN02935 261 TKVDLVITLGGDGTVLWAASMFKGPVPPVVPFSMG-------------SLGFMT---PFHSEQYRDCLDAILKGP 319 (508)
T ss_pred cCCCEEEEECCcHHHHHHHHHhccCCCcEEEEeCC-------------Ccceec---ccCHHHHHHHHHHHHcCC
Confidence 468999999999999998774 5788876421 256544 347889999999998654
No 183
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=55.03 E-value=9.8 Score=39.87 Aligned_cols=69 Identities=20% Similarity=0.157 Sum_probs=36.7
Q ss_pred hHHHHHhcCCceeeccCCC-chHHHHH--HHHHcCcEEEecCCCCCHHHHHHHHHHHhCC-----H----HHHHHHHHHH
Q psy11555 334 GTTEALYSGVPIIGIPMFG-DQKANIR--VVEKAGFGVTLPYDQITEETVLVALRTVLGN-----P----SYKKRAEKVA 401 (484)
Q Consensus 334 s~~Eal~~gvP~i~~P~~~-dQ~~na~--~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~-----~----~~~~~a~~~~ 401 (484)
|-+|++++|+|.|..-+.+ -+..+-. .-...|+- +++...-+.++..+.|.+.|.+ . ..|++++++|
T Consensus 485 TPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~-VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS 563 (633)
T PF05693_consen 485 TPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVY-VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLS 563 (633)
T ss_dssp HHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEE-EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHG
T ss_pred ChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEE-EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 6899999999999987632 2222211 11223443 3555566777777766666532 2 3556666665
Q ss_pred HH
Q psy11555 402 RL 403 (484)
Q Consensus 402 ~~ 403 (484)
++
T Consensus 564 ~~ 565 (633)
T PF05693_consen 564 DL 565 (633)
T ss_dssp GG
T ss_pred Hh
Confidence 43
No 184
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=54.31 E-value=41 Score=32.72 Aligned_cols=35 Identities=17% Similarity=0.429 Sum_probs=22.5
Q ss_pred hHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEE
Q psy11555 334 GTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGV 368 (484)
Q Consensus 334 s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~ 368 (484)
...+....++++..+|++.++.......++.+-.+
T Consensus 268 ~~~~~~f~~~~v~~vp~~~ee~~g~~~l~~l~~~l 302 (322)
T COG0003 268 KELEETFSDLAVVKVPLLAEEPVGLEALEKLGDLL 302 (322)
T ss_pred HHHHHhhcccceEEecccccccccHHHHHHHHHhc
Confidence 35566677777777777777666666555554433
No 185
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=54.29 E-value=17 Score=32.16 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=19.9
Q ss_pred hhhhcCCeEEEEeecCCCCCCCCceEEeeccc
Q psy11555 2 GLTDHGHVVDILSHFPQSSKIPNYNDISVEGS 33 (484)
Q Consensus 2 ~L~~rGH~Vtvvt~~~~~~~~~~~~~i~~~~~ 33 (484)
++.+|||+||+++....-..+.+++.+.+...
T Consensus 38 ~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa 69 (185)
T PF04127_consen 38 EAARRGAEVTLIHGPSSLPPPPGVKVIRVESA 69 (185)
T ss_dssp HHHHTT-EEEEEE-TTS----TTEEEEE-SSH
T ss_pred HHHHCCCEEEEEecCccccccccceEEEecch
Confidence 67889999999999743333568888888754
No 186
>PF11628 TCR_zetazeta: T-cell surface glycoprotein CD3 zeta chain; InterPro: IPR021663 The TCR complex of T-lymphocytes consists of either a TCR alpha/beta or TCR gamma/delta heterodimer co-expressed at the cell surface with the invariant subunits of CD3 labelled gamma, delta, epsilon, zeta, and eta []. The zeta subunit forms either homodimers or heterodimers with eta [], but eta homodimers have not been observed. The structure of the zetazeta transmembrane dimer consists of a left-handed coiled coil with polar contacts. Two aspartic acids are critical for zetazeta dimerisation and assembly with TCR []. The high affinity immunoglobulin epsilon receptor (IgE Fc receptor) subunit gamma associates with a variety of FcR alpha chains to form a functional signaling complex. The gamma subunit has a critical role in allowing the IgE Fc receptor to reach the cell surface and regulates several aspects of the immune response []. This family includes both CD3 zeta subunits and IgE Fc receptor gamma subunits. The gamma chain of the high affinity Fc receptor for IgE has significant structural homology to CD3 zeta and the related CD3 eta subunit and can facilitate T cell receptor expression and signaling in the absence of CD3 zeta and CD3 eta [].; PDB: 2HAC_B.
Probab=53.24 E-value=26 Score=21.05 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy11555 444 ILLDVIIALILLIAAMVWS 462 (484)
Q Consensus 444 ~~lDv~~~~~~~~~~~~~~ 462 (484)
|-||.++++..+++.+++.
T Consensus 6 YiLDgiL~iYgiiiT~L~~ 24 (33)
T PF11628_consen 6 YILDGILFIYGIIITALYC 24 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHH
Confidence 6789998877666555543
No 187
>PLN02929 NADH kinase
Probab=52.71 E-value=17 Score=34.78 Aligned_cols=99 Identities=14% Similarity=0.106 Sum_probs=61.6
Q ss_pred CChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHh---cCCceee
Q psy11555 271 FPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALY---SGVPIIG 347 (484)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~---~gvP~i~ 347 (484)
..++..+.+.+.+++.+..+..... .++ .+.. ..++++|+-||=||++-|.. .++|+++
T Consensus 31 ~h~~~~~~~~~~L~~~gi~~~~v~r-~~~---------------~~~~--~~~Dlvi~lGGDGT~L~aa~~~~~~iPvlG 92 (301)
T PLN02929 31 VHKDTVNFCKDILQQKSVDWECVLR-NEL---------------SQPI--RDVDLVVAVGGDGTLLQASHFLDDSIPVLG 92 (301)
T ss_pred hhHHHHHHHHHHHHHcCCEEEEeec-ccc---------------cccc--CCCCEEEEECCcHHHHHHHHHcCCCCcEEE
Confidence 4456677777778777765422211 111 0112 46789999999999988854 4789999
Q ss_pred ccCCC------chHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 348 IPMFG------DQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 348 ~P~~~------dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
+-... +++.|.- =+..-.|.... .+.+++.+++.+++++.
T Consensus 93 IN~Gp~~~~~~~~~~~~~-~~~r~lGfL~~---~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 93 VNSDPTQKDEVEEYSDEF-DARRSTGHLCA---ATAEDFEQVLDDVLFGR 138 (301)
T ss_pred EECCCccccccccccccc-ccccCcccccc---CCHHHHHHHHHHHHcCC
Confidence 86532 1222221 12224666654 36789999999999654
No 188
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=52.10 E-value=23 Score=34.00 Aligned_cols=55 Identities=22% Similarity=0.236 Sum_probs=41.2
Q ss_pred CceeEEEecCCcchHHHHHh----cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 321 PNVKVFISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~----~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..++++|+=||=||+..|+. .++|++++-... +|... +++.+++.+++++++++.
T Consensus 62 ~~~d~vi~lGGDGT~L~aa~~~~~~~~Pilgin~G~-------------lGFl~---~~~~~~~~~~l~~i~~g~ 120 (292)
T PRK03378 62 QQADLAIVVGGDGNMLGAARVLARYDIKVIGINRGN-------------LGFLT---DLDPDNALQQLSDVLEGH 120 (292)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcCCCCeEEEEECCC-------------CCccc---ccCHHHHHHHHHHHHcCC
Confidence 35899999999999999975 368888875422 35444 346788999999998643
No 189
>PRK12342 hypothetical protein; Provisional
Probab=52.03 E-value=19 Score=33.65 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=27.7
Q ss_pred HHHHhhcCCCccEEEEcccch-----hhHHHHHHHhCCCEEEEeC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT-----DCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~-----~~~~~~A~~l~iP~i~~~~ 127 (484)
+.+.++ ...||+|++..... .-+..+|+.+|+|++....
T Consensus 101 La~~i~-~~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 101 LAAAIE-KIGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred HHHHHH-HhCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 445555 45799999975432 3478899999999886543
No 190
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=51.85 E-value=23 Score=36.11 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=28.2
Q ss_pred HHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 86 KAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
.++.++++ ..++|++|.++. ...+|+++|||++.+.
T Consensus 362 ~e~~~~l~-~~~~dliiG~s~----~~~~a~~~~ip~~~~~ 397 (429)
T cd03466 362 FDIESYAK-ELKIDVLIGNSY----GRRIAEKLGIPLIRIG 397 (429)
T ss_pred HHHHHHHH-hcCCCEEEECch----hHHHHHHcCCCEEEec
Confidence 45677776 778999999844 4678999999998654
No 191
>KOG1387|consensus
Probab=51.14 E-value=2.5e+02 Score=27.58 Aligned_cols=89 Identities=17% Similarity=0.211 Sum_probs=51.6
Q ss_pred CCCcEEEecccCccccccc-CceeEEE-----ecCCcchHHHHHhcCCceeec-----------cCCCchHHHHHHHHHc
Q psy11555 302 KIDKILLKSWAPQRDILDH-PNVKVFI-----SHGGFLGTTEALYSGVPIIGI-----------PMFGDQKANIRVVEKA 364 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~ll~h-~~~~~~I-----thgG~~s~~Eal~~gvP~i~~-----------P~~~dQ~~na~~~~~~ 364 (484)
++++|.+..-+|..++... .++.+-| .|=|. ++.|+|++|.=+|+- |.-++|
T Consensus 335 i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGI-sVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~---------- 403 (465)
T KOG1387|consen 335 IPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGI-SVVEYMAAGLIPIVHNSGGPLLDIVTPWDGET---------- 403 (465)
T ss_pred CccceEEEecCCHHHHHHHhccceeehhhhhhhhcch-hHHHHHhcCceEEEeCCCCCceeeeeccCCcc----------
Confidence 6788999999998876532 2222222 23333 799999999655442 222222
Q ss_pred CcEEEecCCCCCHHHHHHHHHHHhCC-HH----HHHHHHHHHHHHhC
Q psy11555 365 GFGVTLPYDQITEETVLVALRTVLGN-PS----YKKRAEKVARLFQD 406 (484)
Q Consensus 365 G~g~~l~~~~~~~~~l~~ai~~~l~~-~~----~~~~a~~~~~~~~~ 406 (484)
.|... .|.++-+++|.+++.. ++ .|++|+.-...|.+
T Consensus 404 -tGFla----~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE 445 (465)
T KOG1387|consen 404 -TGFLA----PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGE 445 (465)
T ss_pred -ceeec----CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhH
Confidence 23332 3678888898888754 22 44555544444433
No 192
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=50.79 E-value=1e+02 Score=27.09 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=56.9
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----CC-CCCCCcEEEeccc-Cccccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NM-SGKIDKILLKSWA-PQRDIL 318 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~-~~~~~nv~~~~~~-pq~~ll 318 (484)
++-+++... +..+|+-|+. .-++.++.++..+.+-+++=..... +. .+..+...+.+-+ ....++
T Consensus 23 ~lG~~la~~--g~~lV~GGg~-------~GlM~a~a~ga~~~gG~viGi~p~~l~~~~~~~~~~~~~i~~~~~~~Rk~~m 93 (178)
T TIGR00730 23 ELGAYLAGQ--GWGLVYGGGR-------VGLMGAIADAAMENGGTAVGVNPSGLFSGEVVHQNLTELIEVNGMHERKAMM 93 (178)
T ss_pred HHHHHHHHC--CCEEEECCCh-------HhHHHHHHHHHHhcCCeEEEecchhhhhhhccCCCCCceEEECCHHHHHHHH
Confidence 344555544 4556666643 2356777777666655554333221 11 1112223333333 344455
Q ss_pred ccCceeEEE-ecCCcchHHHHHh---------cCCceeeccC--CCchHH-HHHHHHHcCc
Q psy11555 319 DHPNVKVFI-SHGGFLGTTEALY---------SGVPIIGIPM--FGDQKA-NIRVVEKAGF 366 (484)
Q Consensus 319 ~h~~~~~~I-thgG~~s~~Eal~---------~gvP~i~~P~--~~dQ~~-na~~~~~~G~ 366 (484)
. ..+++|| -.||.||+.|.+. +.+|++++-. +.|... ..+.+.+.|.
T Consensus 94 ~-~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~l~~~l~~~~~~gf 153 (178)
T TIGR00730 94 A-ELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDGLVEWLKYSIQEGF 153 (178)
T ss_pred H-HhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHHHHHHHHHHHHCCC
Confidence 4 3455554 6678999877643 4899998742 233322 3345555553
No 193
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=50.65 E-value=25 Score=33.72 Aligned_cols=54 Identities=24% Similarity=0.264 Sum_probs=41.3
Q ss_pred ceeEEEecCCcchHHHHHh----cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALY----SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~----~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+-||=||+.+++. .++|++++... .+|... +.+.+++.++|+++++++
T Consensus 62 ~~d~vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G-------------~lGFl~---~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCDLVIVVGGDGSLLGAARALARHNVPVLGINRG-------------RLGFLT---DIRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCCEEEEEeCcHHHHHHHHHhcCCCCCEEEEeCC-------------cccccc---cCCHHHHHHHHHHHHcCC
Confidence 5789999999999999875 36799987652 245433 457899999999998643
No 194
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=50.17 E-value=26 Score=36.64 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=27.8
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
+++++++ ..++|++|.++. +..+|+.+|+|+|.+..
T Consensus 428 ~l~~~l~-~~~~DlliG~s~----~k~~a~~~giPlir~gf 463 (515)
T TIGR01286 428 HLRSLVF-TEPVDFLIGNSY----GKYIQRDTLVPLIRIGF 463 (515)
T ss_pred HHHHHHh-hcCCCEEEECch----HHHHHHHcCCCEEEecC
Confidence 4566676 779999999843 56689999999987653
No 195
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=49.72 E-value=33 Score=31.90 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=37.6
Q ss_pred ceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 322 NVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
.++++|+-||=||++.|+.. ++|++++-... +|...+ ..+.+++.+++.++..+
T Consensus 25 ~~Dlvi~iGGDGTlL~a~~~~~~~~~PvlGIN~G~-------------lGFL~~--~~~~~e~~~~l~~~~~~ 82 (246)
T PRK04761 25 EADVIVALGGDGFMLQTLHRYMNSGKPVYGMNRGS-------------VGFLMN--EYSEDDLLERIAAAEPT 82 (246)
T ss_pred cCCEEEEECCCHHHHHHHHHhcCCCCeEEEEeCCC-------------CCcccC--CCCHHHHHHHHHHhhcC
Confidence 46899999999999988654 68988875531 454442 23557777777776643
No 196
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=49.59 E-value=49 Score=32.58 Aligned_cols=91 Identities=14% Similarity=0.154 Sum_probs=61.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC--C---CCC------CCcEEEeccc--Cc-cccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--M---SGK------IDKILLKSWA--PQ-RDILDH 320 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~--~---~~~------~~nv~~~~~~--pq-~~ll~h 320 (484)
++.|.+..|+.......|.+...++++.+.+.+.++++..++++ . .++ +..+-..+-. .+ ..++
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali-- 260 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALI-- 260 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHH--
Confidence 46788888887666778888889998888766778777655421 1 111 1122233322 22 2455
Q ss_pred CceeEEEecCCcchHHHHHhcCCceeec
Q psy11555 321 PNVKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
.++++||+.=. |-++=|.+.|+|+|++
T Consensus 261 ~~a~l~v~nDS-Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 261 DHAQLFIGVDS-APAHIAAAVNTPLICL 287 (352)
T ss_pred HhCCEEEecCC-HHHHHHHHcCCCEEEE
Confidence 67899999875 5788888999999986
No 197
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=47.80 E-value=35 Score=35.80 Aligned_cols=35 Identities=11% Similarity=0.161 Sum_probs=27.3
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++ +.+||+||.++. ...+|+++|||++.++
T Consensus 353 el~~~i~-~~~PdliiG~~~----er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 353 EVEDAIA-EAAPELVLGTQM----ERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHH-hcCCCEEEEcch----HHHHHHHcCCCEEEec
Confidence 5666776 778999998753 4457999999998776
No 198
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=47.63 E-value=39 Score=29.25 Aligned_cols=48 Identities=19% Similarity=0.292 Sum_probs=28.2
Q ss_pred HHHHHhCCHHHHHHhhcCCCccEEEEcccchhhH-HH-HHHH--h-CCCEEEEeC
Q psy11555 78 TCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCF-LG-FVYK--F-KVPYIAVSA 127 (484)
Q Consensus 78 ~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~-~~-~A~~--l-~iP~i~~~~ 127 (484)
.+...+. +.+.++|+ +.+||+||+-..+.... +. +.++ + ++|++.+.+
T Consensus 72 ~~~~~~~-~~l~~~l~-~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 72 ALSRLFA-RRLIRLLR-EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHH-HHHHHHHh-hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 3343343 36888998 89999999987642112 21 1112 3 578775544
No 199
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=47.26 E-value=33 Score=35.01 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=27.2
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
++.+.++ ..++|++|..+. ...+|+++|+|++.+..
T Consensus 368 e~~~~i~-~~~pDliiG~s~----~~~~a~~~gip~v~~~~ 403 (435)
T cd01974 368 HLRSLLF-TEPVDLLIGNTY----GKYIARDTDIPLVRFGF 403 (435)
T ss_pred HHHHHHh-hcCCCEEEECcc----HHHHHHHhCCCEEEeeC
Confidence 4556666 778999999843 46689999999986653
No 200
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=47.13 E-value=76 Score=31.03 Aligned_cols=91 Identities=18% Similarity=0.239 Sum_probs=60.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC--CC------C-CCC-CcE-EEeccc--Cc-cccccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NM------S-GKI-DKI-LLKSWA--PQ-RDILDH 320 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~--~~------~-~~~-~nv-~~~~~~--pq-~~ll~h 320 (484)
++.|.+..|+.......+.+....+++.+...+.++++..+++ +. . ..+ +++ -+.+-. .+ ..++
T Consensus 181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali-- 258 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALI-- 258 (344)
T ss_pred CCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHH--
Confidence 4678888888766567888888888888876667777765532 10 0 111 122 122222 22 2445
Q ss_pred CceeEEEecCCcchHHHHHhcCCceeec
Q psy11555 321 PNVKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
.+++++|+.= .|.++=|.+.|+|+|++
T Consensus 259 ~~a~l~Vs~D-SGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 259 DHARLFIGVD-SVPMHMAAALGTPLVAL 285 (344)
T ss_pred HhCCEEEecC-CHHHHHHHHcCCCEEEE
Confidence 6899999985 46889999999999986
No 201
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=46.72 E-value=28 Score=32.61 Aligned_cols=39 Identities=15% Similarity=0.053 Sum_probs=27.8
Q ss_pred HHHHhhcCCCccEEEEcccc-----hhhHHHHHHHhCCCEEEEeC
Q psy11555 88 ALDLLHSSKKYDLIITEVFN-----TDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~-----~~~~~~~A~~l~iP~i~~~~ 127 (484)
+.+.++ ...||+|++.... ..-+..+|+.+|+|++....
T Consensus 104 La~ai~-~~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 104 LAAAAQ-KAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred HHHHHH-HhCCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 445555 4579999997532 23667799999999886544
No 202
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=46.35 E-value=1.3e+02 Score=27.13 Aligned_cols=101 Identities=21% Similarity=0.141 Sum_probs=59.0
Q ss_pred eEEEcccccCCCCCCccchHHHhhhc---CceEEEEeecceeccCCCChHHHHHHHHHHhcC-CcEEEEEecCCCCCCCC
Q psy11555 228 VIEVAGLHVKSPQPLPNDIKKFLDES---VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGENMSGKI 303 (484)
Q Consensus 228 v~~vG~~~~~~~~~l~~~l~~~l~~~---~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~ 303 (484)
++.+|+-..+......+.+.+++... ...++|+...|. ..++....+.+++.++ +..+......+
T Consensus 2 l~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~-----~~~~~~~~~~~a~~~l~G~~~~~~~~~~------ 70 (212)
T cd03146 2 LLLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASG-----DRDEYTARFYAAFESLRGVEVSHLHLFD------ 70 (212)
T ss_pred EEEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCC-----CHHHHHHHHHHHHhhccCcEEEEEeccC------
Confidence 34455443321122345566666655 256788877776 4567888899999998 77544321100
Q ss_pred CcEEEecccCc-ccccccCceeEEEecCCcc--------------hHHHHHhcCCceeecc
Q psy11555 304 DKILLKSWAPQ-RDILDHPNVKVFISHGGFL--------------GTTEALYSGVPIIGIP 349 (484)
Q Consensus 304 ~nv~~~~~~pq-~~ll~h~~~~~~IthgG~~--------------s~~Eal~~gvP~i~~P 349 (484)
-++ .+.+ .++++++--||.. .+.++...|+|++++-
T Consensus 71 --------~~~~~~~l--~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~S 121 (212)
T cd03146 71 --------TEDPLDAL--LEADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWS 121 (212)
T ss_pred --------cccHHHHH--hcCCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEEC
Confidence 122 2334 4678888888721 1344556799988864
No 203
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=45.62 E-value=35 Score=29.33 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=26.0
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKW 294 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~ 294 (484)
..+|+|+||+.. .+.+.++..+.++.+.+..-++..
T Consensus 2 ~~vyl~LGSNlg---d~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 2 TRVYLGLGSNLG---DRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred cEEEEEecCCCC---CHHHHHHHHHHHHHhCCCceEEEe
Confidence 368999999964 556678888888888875323333
No 204
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=44.44 E-value=46 Score=32.39 Aligned_cols=91 Identities=12% Similarity=0.151 Sum_probs=59.4
Q ss_pred ceEEEEeeccee-ccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-------CCCCcEE-Eeccc--Cc-ccccccCc
Q psy11555 255 NGVIYFSMGSII-QGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------GKIDKIL-LKSWA--PQ-RDILDHPN 322 (484)
Q Consensus 255 ~~~v~vs~Gs~~-~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-------~~~~nv~-~~~~~--pq-~~ll~h~~ 322 (484)
++.|.+.-|+.. .....+.+...++++.+.+.+.+++...++++.. ..++++. +.+-. .+ ..++ .+
T Consensus 174 ~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali--~~ 251 (334)
T TIGR02195 174 RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLDEAVDLI--AL 251 (334)
T ss_pred CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHHHHHHHH--Hh
Confidence 577888888753 4567888888898888876566776655443211 1222222 22222 22 2455 67
Q ss_pred eeEEEecCCcchHHHHHhcCCceeec
Q psy11555 323 VKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 323 ~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
++++|+.=. |-++=|.+.|+|+|++
T Consensus 252 a~l~I~~DS-Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 252 AKAVVTNDS-GLMHVAAALNRPLVAL 276 (334)
T ss_pred CCEEEeeCC-HHHHHHHHcCCCEEEE
Confidence 999998875 5788889999999986
No 205
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=44.36 E-value=37 Score=32.44 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=16.1
Q ss_pred hhhhcCCeEEEEeecCCCC
Q psy11555 2 GLTDHGHVVDILSHFPQSS 20 (484)
Q Consensus 2 ~L~~rGH~Vtvvt~~~~~~ 20 (484)
+|.++||.|-|+.-+|...
T Consensus 74 ~l~~~G~rVaVlAVDPSSp 92 (323)
T COG1703 74 ELRERGHRVAVLAVDPSSP 92 (323)
T ss_pred HHHHCCcEEEEEEECCCCC
Confidence 6889999999999987643
No 206
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=42.87 E-value=40 Score=34.36 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=27.5
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.++++ +.++|++|..+. ...+|+++|||++.+.
T Consensus 364 ~l~~~i~-~~~~dliig~s~----~k~~A~~l~ip~ir~g 398 (432)
T TIGR01285 364 DLEDLAC-AAGADLLITNSH----GRALAQRLALPLVRAG 398 (432)
T ss_pred HHHHHHh-hcCCCEEEECcc----hHHHHHHcCCCEEEec
Confidence 5667776 778999999844 4568999999998654
No 207
>COG3563 KpsC Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=42.56 E-value=2.4e+02 Score=28.99 Aligned_cols=155 Identities=16% Similarity=0.178 Sum_probs=80.0
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEec-CCC--------C--CCCCCcEEEe-cccCcccccccCceeEEEecCCcchHHHHH
Q psy11555 272 PSDKRKAFLRAFEQIPQRVIWKWE-GEN--------M--SGKIDKILLK-SWAPQRDILDHPNVKVFISHGGFLGTTEAL 339 (484)
Q Consensus 272 ~~~~~~~~~~a~~~~~~~~i~~~~-~~~--------~--~~~~~nv~~~-~~~pq~~ll~h~~~~~~IthgG~~s~~Eal 339 (484)
....+.++-.|+...|+.-||.-. ++- + ...+..+++. .-+.--.+|.| ++=+-|--. ++=.||+
T Consensus 165 ~~~~l~m~~~ai~enp~a~i~~kthpdvl~gkkqg~lt~~~~~~r~~ll~edfnpisll~~--~dkvy~~ts-~mgfeal 241 (671)
T COG3563 165 ASTFLLMFQTAINENPQADIWVKTHPDVLCGKKQGYLTQLSQQHRVHLLAEDFNPISLLQN--VDKVYCVTS-QMGFEAL 241 (671)
T ss_pred hhHHHHHHHHHHhcCCcccEEEEeCCchhcCcccchhhhhccCceEEEecccCChHHHHHh--cceeEEeec-cccHHHH
Confidence 346778888899999998888632 211 1 1134555543 33444556633 443332221 1337999
Q ss_pred hcCCceeec--cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHH
Q psy11555 340 YSGVPIIGI--PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIY 417 (484)
Q Consensus 340 ~~gvP~i~~--P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 417 (484)
.+|+|+++. |.++ |.|+.=+.-+-+...-...+.++ +-..--+.++-++.. .+-....-+
T Consensus 242 l~~~~~~~fg~p~ya------------gwgltddrl~~~~r~akrsl~ql-----fyaay~~y~ry~np~-~~~~~~lfd 303 (671)
T COG3563 242 LCGKPLTTFGLPWYA------------GWGLTDDRLEQTQRRAKRSLLQL-----FYAAYLQYSRYLNPN-TGEAGSLFD 303 (671)
T ss_pred hcCCceeeecchhhc------------ccCcchhHHHHHHhhhhhhHHHH-----HHHHHHHHHHhcCCC-ccccchHHH
Confidence 999999975 4443 55543322111111111122222 223333445555432 333455678
Q ss_pred HHHHHHHcCCCCCc-cccc--CCCcHHHHHHHH
Q psy11555 418 WIEHVIRHGGGAHL-RPAS--LELYWWQYILLD 447 (484)
Q Consensus 418 ~ie~~~~~~~~~~l-~~~~--~~~~~~~~~~lD 447 (484)
.||+++..+..+.. +..- ..|++|...-.+
T Consensus 304 ~id~lat~k~~~~~~~~~lf~vG~~~WKR~v~~ 336 (671)
T COG3563 304 VIDYLATVKRKNDKLRGELFCVGMSLWKRAVAK 336 (671)
T ss_pred HHHHHHHHhccccCCCCceEEEehHHhhhhhhc
Confidence 89999887544332 2222 266667666555
No 208
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.07 E-value=36 Score=36.08 Aligned_cols=54 Identities=24% Similarity=0.320 Sum_probs=41.4
Q ss_pred ceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 322 NVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 322 ~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.++++|+-||=||++.|... ++|++++-... +|... +.+.+++.++++++++++
T Consensus 348 ~~dlvi~lGGDGT~L~aa~~~~~~~~PilGin~G~-------------lGFL~---~~~~~~~~~~l~~~~~g~ 405 (569)
T PRK14076 348 EISHIISIGGDGTVLRASKLVNGEEIPIICINMGT-------------VGFLT---EFSKEEIFKAIDSIISGE 405 (569)
T ss_pred CCCEEEEECCcHHHHHHHHHhcCCCCCEEEEcCCC-------------CCcCc---ccCHHHHHHHHHHHHcCC
Confidence 57999999999999988763 78999875532 44433 446788999999998553
No 209
>PF10661 EssA: WXG100 protein secretion system (Wss), protein EssA; InterPro: IPR018920 The Wss (WXG100 protein secretion system) in Staphylococcus aureus seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) []. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus in conjunction with YukC and YukAB. Proteins homologous to EssA, YukC, EsaA and YukD were absent from mycobacteria []. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This highly divergent protein family consists largely of a central region of highly polar low-complexity sequence containing occasional LF motifs in weak repeats about 17 residues in length, flanked by hydrophobic N- and C-terminal regions.
Probab=41.85 E-value=38 Score=28.68 Aligned_cols=24 Identities=13% Similarity=0.206 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 448 VIIALILLIAAMVWSIQWLVRYAL 471 (484)
Q Consensus 448 v~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
|+++++++++++.+++|.++|.++
T Consensus 121 i~~~i~g~ll~i~~giy~~~r~~~ 144 (145)
T PF10661_consen 121 ILLSIGGILLAICGGIYVVLRKVW 144 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444455566666777888888765
No 210
>smart00096 UTG Uteroglobin.
Probab=41.37 E-value=1.3e+02 Score=21.78 Aligned_cols=50 Identities=12% Similarity=0.228 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 376 TEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 376 ~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
|.+....++..--.|++..+++.++++....=+..-.+.++..+|.+...
T Consensus 17 t~~~Y~~~l~~y~~~~~~~ea~~~lK~cvD~L~~~~k~~i~~ll~kI~~s 66 (69)
T smart00096 17 TPSSYEASLKQFKPDPDMLEAGRQLKKLVDTLPQETRENILKLTEKIYTS 66 (69)
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcC
Confidence 67788889988888899999999999877664455566788888887754
No 211
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=40.09 E-value=81 Score=30.46 Aligned_cols=17 Identities=24% Similarity=0.315 Sum_probs=13.7
Q ss_pred hhhhcCCeEEEEeecCC
Q psy11555 2 GLTDHGHVVDILSHFPQ 18 (484)
Q Consensus 2 ~L~~rGH~Vtvvt~~~~ 18 (484)
.++++|++|-++|++|.
T Consensus 24 ~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 24 ALARRGKRTLLVSTDPA 40 (305)
T ss_dssp HHHHTTS-EEEEESSTT
T ss_pred HHhhCCCCeeEeecCCC
Confidence 47899999999999763
No 212
>PRK09620 hypothetical protein; Provisional
Probab=40.03 E-value=77 Score=29.16 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=13.5
Q ss_pred ChhhhcCCeEEEEeec
Q psy11555 1 MGLTDHGHVVDILSHF 16 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~ 16 (484)
++|.++||+|+++...
T Consensus 37 ~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 37 EELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHCCCeEEEEeCC
Confidence 3688999999999865
No 213
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=39.60 E-value=54 Score=33.36 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=28.4
Q ss_pred HHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 86 KAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
.++.+.++ ..+||++|.+.. ...+|+++|+|++.++.
T Consensus 360 ~e~~~~i~-~~~pdliig~~~----~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 360 TEVGDMIA-RTEPELIFGTQM----ERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHHH-hhCCCEEEecch----hhHHHHHcCCCEEEEeC
Confidence 34667776 778999999854 33468999999988765
No 214
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=39.24 E-value=50 Score=31.88 Aligned_cols=94 Identities=12% Similarity=0.074 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhc----CCceeec
Q psy11555 273 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS----GVPIIGI 348 (484)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~----gvP~i~~ 348 (484)
.+.++.+.+.+++.+..+.+....... .+.. .+ . .+.. ..++++|+-||=||+.+++.. ++|++++
T Consensus 18 ~~~~~~i~~~L~~~g~~v~v~~~~~~~--~~~~----~~-~-~~~~--~~~d~vi~~GGDGT~l~~~~~~~~~~~pv~gi 87 (305)
T PRK02645 18 KEAAERCAKQLEARGCKVLMGPSGPKD--NPYP----VF-L-ASAS--ELIDLAIVLGGDGTVLAAARHLAPHDIPILSV 87 (305)
T ss_pred HHHHHHHHHHHHHCCCEEEEecCchhh--cccc----ch-h-hccc--cCcCEEEEECCcHHHHHHHHHhccCCCCEEEE
Confidence 355667777777777765543221110 0100 01 1 1111 357899999999999999864 7899987
Q ss_pred cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 349 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 349 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
...+ .+|...+... ..++ .+++++++++
T Consensus 88 n~~G------------~lGFL~~~~~-~~~~-~~~l~~i~~g 115 (305)
T PRK02645 88 NVGG------------HLGFLTHPRD-LLQD-ESVWDRLQED 115 (305)
T ss_pred ecCC------------cceEecCchh-hcch-HHHHHHHHcC
Confidence 6521 2566664321 1222 6677777754
No 215
>PLN02727 NAD kinase
Probab=39.00 E-value=48 Score=36.76 Aligned_cols=55 Identities=18% Similarity=0.098 Sum_probs=42.4
Q ss_pred CceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 321 PNVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..++++|+=||=||++.|... ++|++++-.. .+|... +++.+++.++|.+++++.
T Consensus 742 ~~~DLVIvLGGDGTlLrAar~~~~~~iPILGINlG-------------rLGFLT---di~~ee~~~~L~~Il~G~ 800 (986)
T PLN02727 742 ERVDFVACLGGDGVILHASNLFRGAVPPVVSFNLG-------------SLGFLT---SHYFEDFRQDLRQVIHGN 800 (986)
T ss_pred cCCCEEEEECCcHHHHHHHHHhcCCCCCEEEEeCC-------------Cccccc---cCCHHHHHHHHHHHHcCC
Confidence 468999999999999998764 6898887553 245544 347888999999999554
No 216
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=38.20 E-value=45 Score=24.95 Aligned_cols=16 Identities=19% Similarity=0.575 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11555 445 LLDVIIALILLIAAMV 460 (484)
Q Consensus 445 ~lDv~~~~~~~~~~~~ 460 (484)
.+|+++++.+++++++
T Consensus 3 ~l~i~~iialiv~~ii 18 (81)
T PF00558_consen 3 SLEILAIIALIVALII 18 (81)
T ss_dssp -----HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4566555544443333
No 217
>PF05399 EVI2A: Ectropic viral integration site 2A protein (EVI2A); InterPro: IPR008608 This family contains several mammalian ectropic viral integration site 2A (EVI2A) proteins. The function of this protein is unknown although it is thought to be a membrane protein and may function as an oncogene in retrovirus induced myeloid tumours [, ].; GO: 0016021 integral to membrane
Probab=37.85 E-value=37 Score=30.26 Aligned_cols=19 Identities=26% Similarity=0.377 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy11555 443 YILLDVIIALILLIAAMVW 461 (484)
Q Consensus 443 ~~~lDv~~~~~~~~~~~~~ 461 (484)
..+|=|++++++++.+++.
T Consensus 131 LIClIIIAVLfLICT~LfL 149 (227)
T PF05399_consen 131 LICLIIIAVLFLICTLLFL 149 (227)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555544444333
No 218
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=37.21 E-value=89 Score=30.65 Aligned_cols=92 Identities=12% Similarity=0.074 Sum_probs=59.0
Q ss_pred CceEEEEeeccee-ccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-------CCC----Cc-EEEecccC--c-ccc
Q psy11555 254 VNGVIYFSMGSII-QGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------GKI----DK-ILLKSWAP--Q-RDI 317 (484)
Q Consensus 254 ~~~~v~vs~Gs~~-~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-------~~~----~n-v~~~~~~p--q-~~l 317 (484)
+++.|.+..|+.. .....|.+...++++.+...+.++++..++++.. ..+ .+ +.+.+-.+ + ..+
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~al 258 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVIL 258 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHH
Confidence 3578888888853 4467888888899888865566766654432211 011 11 22223222 2 235
Q ss_pred cccCceeEEEecCCcchHHHHHhcCCceeec
Q psy11555 318 LDHPNVKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 318 l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
+ .+++++|+.=. |-++=|.+.|+|+|++
T Consensus 259 i--~~a~l~I~nDT-Gp~HlAaA~g~P~val 286 (348)
T PRK10916 259 I--AACKAIVTNDS-GLMHVAAALNRPLVAL 286 (348)
T ss_pred H--HhCCEEEecCC-hHHHHHHHhCCCEEEE
Confidence 5 67899998764 5788899999999986
No 219
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=36.96 E-value=1.3e+02 Score=29.58 Aligned_cols=95 Identities=18% Similarity=0.246 Sum_probs=61.6
Q ss_pred EEEecccCcccccccCceeEEEecCCcch----HHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHH
Q psy11555 306 ILLKSWAPQRDILDHPNVKVFISHGGFLG----TTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVL 381 (484)
Q Consensus 306 v~~~~~~pq~~ll~h~~~~~~IthgG~~s----~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 381 (484)
..+.+..+-.+.|+ ..+|++|+|==-|. -.|+++.|=|.|- |+..+.+ +|...+. ++..+=.
T Consensus 255 asfegR~~~p~fla-~~tD~VvSHqWeN~lNYlY~daLyggYPLVH---------NS~~l~d--~GYYY~~--fD~~~G~ 320 (364)
T PF10933_consen 255 ASFEGRFDFPDFLA-QHTDAVVSHQWENPLNYLYYDALYGGYPLVH---------NSPLLKD--VGYYYPD--FDAFEGA 320 (364)
T ss_pred eEEeeecChHHHHH-hCCCEEEeccccchhhHHHHHHHhcCCCccc---------Ccchhcc--cCcCCCC--ccHHHHH
Confidence 34445555555565 46899999964443 6899999999995 8887776 7766653 3444434
Q ss_pred HHHHHHh----CC-HHHHHHHHHHHHHHhCCCCChHHHHH
Q psy11555 382 VALRTVL----GN-PSYKKRAEKVARLFQDRPMPPLDTAI 416 (484)
Q Consensus 382 ~ai~~~l----~~-~~~~~~a~~~~~~~~~~~~~~~~~~~ 416 (484)
+++.+.+ .| ++|+++++++-..+.. .++....+
T Consensus 321 r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p--~n~~nv~~ 358 (364)
T PF10933_consen 321 RQLLRAIREHDADLDAYRARARRLLDRLSP--ENPANVRA 358 (364)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHHhhCC--CCHHHHHH
Confidence 4444433 22 6799999988776654 56554443
No 220
>COG2861 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.65 E-value=87 Score=28.83 Aligned_cols=49 Identities=16% Similarity=0.102 Sum_probs=29.3
Q ss_pred HHHHHhCCHHHHHHh-hcCCCccEEEEcccch--hhHHHHHHHhCCCEEEEe
Q psy11555 78 TCEAVMSTKAALDLL-HSSKKYDLIITEVFNT--DCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 78 ~c~~~l~~~~l~~~l-~~~~~~DlvI~d~~~~--~~~~~~A~~l~iP~i~~~ 126 (484)
+-..+..+++.++.+ +.-.+-++.+.|.... .-...+|+..|+|++.-.
T Consensus 129 mGs~~tsn~~aM~~~m~~Lk~r~l~flDs~T~a~S~a~~iAk~~gVp~~~rd 180 (250)
T COG2861 129 MGSRFTSNEDAMEKLMEALKERGLYFLDSGTIANSLAGKIAKEIGVPVIKRD 180 (250)
T ss_pred hhhhhcCcHHHHHHHHHHHHHCCeEEEcccccccchhhhhHhhcCCceeeee
Confidence 333455565544433 2123789999997532 233458889999987643
No 221
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=36.62 E-value=65 Score=31.47 Aligned_cols=40 Identities=18% Similarity=0.212 Sum_probs=28.5
Q ss_pred HHHHHhhcCCCccEEEEcccch------hhHHH---HHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNT------DCFLG---FVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~------~~~~~---~A~~l~iP~i~~~~ 127 (484)
++.++++ ..+||++|+.+.++ .|+.. +.+.++||.|.-..
T Consensus 71 ~i~~mv~-~~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM~ 119 (349)
T PF07355_consen 71 KILEMVK-KLKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAMY 119 (349)
T ss_pred HHHHHHH-hcCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEec
Confidence 4667777 88999999998653 23322 56679999986443
No 222
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=36.36 E-value=64 Score=24.35 Aligned_cols=18 Identities=17% Similarity=0.113 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy11555 445 LLDVIIALILLIAAMVWSI 463 (484)
Q Consensus 445 ~lDv~~~~~~~~~~~~~~~ 463 (484)
+||+. ++.++.++++.++
T Consensus 32 ~Lgm~-~lvI~~iFil~Vi 49 (94)
T PF05393_consen 32 NLGMW-FLVICGIFILLVI 49 (94)
T ss_pred ccchh-HHHHHHHHHHHHH
Confidence 67766 3344444333333
No 223
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=36.15 E-value=2.4e+02 Score=29.67 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=55.4
Q ss_pred CCCCCcEEEecccCcc---cccccCceeEEEecCC---cchHHHHHhcCCceeec----cC-------CC---------c
Q psy11555 300 SGKIDKILLKSWAPQR---DILDHPNVKVFISHGG---FLGTTEALYSGVPIIGI----PM-------FG---------D 353 (484)
Q Consensus 300 ~~~~~nv~~~~~~pq~---~ll~h~~~~~~IthgG---~~s~~Eal~~gvP~i~~----P~-------~~---------d 353 (484)
..+|+-|.=.+-+++. .+| .++++||--|. .-+-.||+++|+|.|-- |. +. .
T Consensus 318 ~~~P~~V~NHG~l~~~ef~~lL--~~akvfiGlGfP~EgPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~S 395 (559)
T PF15024_consen 318 PNVPSFVKNHGILSGDEFQQLL--RKAKVFIGLGFPYEGPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTS 395 (559)
T ss_pred cccchhhhhcCcCCHHHHHHHH--HhhhEeeecCCCCCCCChHHHHHcCCccccccCCCCCcccccccccCCCCcceecc
Confidence 4566666656667765 456 67899997776 34789999999987742 21 11 2
Q ss_pred hHHHHHHHHHcC--cEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 354 QKANIRVVEKAG--FGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 354 Q~~na~~~~~~G--~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
|.-.|+. ..| .-..++.. +.+++.+||+++|+++
T Consensus 396 QhPY~e~--~iG~PhVytVd~~--n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 396 QHPYAEE--FIGEPHVYTVDIN--NSTEVEAAVKAILATP 431 (559)
T ss_pred CChHHHh--hCCCCeEEEEcCC--CHHHHHHHHHHHHhcC
Confidence 3332221 133 33446555 7899999999999763
No 224
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=35.79 E-value=19 Score=33.54 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=13.0
Q ss_pred ChhhhcCCeEEEEeec
Q psy11555 1 MGLTDHGHVVDILSHF 16 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~ 16 (484)
++|+++||+|+|++|.
T Consensus 27 kaL~~~G~~V~Vi~P~ 42 (245)
T PF08323_consen 27 KALAKQGHDVRVIMPK 42 (245)
T ss_dssp HHHHHTT-EEEEEEE-
T ss_pred HHHHhcCCeEEEEEcc
Confidence 4799999999999994
No 225
>PHA02845 hypothetical protein; Provisional
Probab=35.51 E-value=1.6e+02 Score=22.49 Aligned_cols=42 Identities=21% Similarity=0.390 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHHH
Q psy11555 412 LDTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMV 460 (484)
Q Consensus 412 ~~~~~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~~~~~~~~~~ 460 (484)
-++..+.|-+-++++..+.+|| +-+...|+..+++++..+++
T Consensus 19 nek~LDcIi~~iE~~~~~llRP-------~~RLlfDl~i~viVi~~~~i 60 (91)
T PHA02845 19 NESILDCIINEIENNHHYLFRP-------FIRLTIDLILLIIVMIFLMI 60 (91)
T ss_pred hhhHHHHHHHHHHhcccHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 4555666666566654456776 56788999877665544443
No 226
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=35.23 E-value=63 Score=28.25 Aligned_cols=42 Identities=17% Similarity=0.096 Sum_probs=27.4
Q ss_pred CCHHHHHHhhcCCCccEEEEcccchhh-HHHHHHHhCCCEEEEeC
Q psy11555 84 STKAALDLLHSSKKYDLIITEVFNTDC-FLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 84 ~~~~l~~~l~~~~~~DlvI~d~~~~~~-~~~~A~~l~iP~i~~~~ 127 (484)
..+.+.+++ ..+||+||+....... ....-+..|||++.+..
T Consensus 58 ~~~n~E~ll--~l~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~~ 100 (186)
T cd01141 58 GSLNVELIV--ALKPDLVILYGGFQAQTILDKLEQLGIPVLYVNE 100 (186)
T ss_pred CCCCHHHHh--ccCCCEEEEecCCCchhHHHHHHHcCCCEEEeCC
Confidence 345566666 5799999986543333 33344668999988753
No 227
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=35.15 E-value=91 Score=28.89 Aligned_cols=47 Identities=13% Similarity=0.171 Sum_probs=31.1
Q ss_pred HHHhCCHHHHHHhh-------cCCCccEEEEccc-chhhHHHHHHHhCCCEEEEe
Q psy11555 80 EAVMSTKAALDLLH-------SSKKYDLIITEVF-NTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 80 ~~~l~~~~l~~~l~-------~~~~~DlvI~d~~-~~~~~~~~A~~l~iP~i~~~ 126 (484)
..++.+|++.+.+. ....+|+|++-.. .-+.+..+|..+|+|++...
T Consensus 87 ~~il~~p~~~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~R 141 (238)
T PRK08558 87 SSVVFDPSFLRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAK 141 (238)
T ss_pred hhhhcCHHHHHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEE
Confidence 34556666554432 2457899987543 22667779999999988764
No 228
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=34.81 E-value=55 Score=21.35 Aligned_cols=25 Identities=36% Similarity=0.356 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHhCC-HHHHHHHHHH
Q psy11555 376 TEETVLVALRTVLGN-PSYKKRAEKV 400 (484)
Q Consensus 376 ~~~~l~~ai~~~l~~-~~~~~~a~~~ 400 (484)
++++|.+||..+.++ -++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 478899999999977 5677766654
No 229
>PRK13240 pbsY photosystem II protein Y; Reviewed
Probab=34.81 E-value=93 Score=19.82 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q psy11555 448 VIIALILLIAAMVWSIQWLVRYALITYYNTVDDKK 482 (484)
Q Consensus 448 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (484)
++++++-++.++.|.++.+.+-.+....+...++|
T Consensus 5 lliVl~Pil~A~~Wa~fNIg~~Al~Q~q~~~~~~~ 39 (40)
T PRK13240 5 LLIVLAPILAAAGWAVFNIGKAAREQFQRFLNRKA 39 (40)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhcC
Confidence 44455556777888999888888777766665554
No 230
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=34.55 E-value=98 Score=25.75 Aligned_cols=11 Identities=0% Similarity=0.307 Sum_probs=6.5
Q ss_pred cHHHHHHHHHH
Q psy11555 439 YWWQYILLDVI 449 (484)
Q Consensus 439 ~~~~~~~lDv~ 449 (484)
+|+.-|++-++
T Consensus 25 sffsthm~tIL 35 (189)
T PF05568_consen 25 SFFSTHMYTIL 35 (189)
T ss_pred cHHHHHHHHHH
Confidence 56666665444
No 231
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=34.15 E-value=39 Score=34.63 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=25.5
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEE
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~ 125 (484)
++.+.++ +.++|++|..+. +..+|+++|||++.+
T Consensus 378 e~~~~i~-~~~pdllig~s~----~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 378 EFEEILE-KLKPDIIFSGIK----EKFVAQKLGVPYRQM 411 (443)
T ss_pred HHHHHHH-hcCCCEEEEcCc----chhhhhhcCCCeEec
Confidence 4455565 678999998743 456899999999864
No 232
>TIGR02931 anfK_nitrog Fe-only nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, AnfK, represents the beta subunit of the iron-only alternative nitrogenase. It is homologous to NifK and VnfK, of the molybdenum-containing and the vanadium (V)-containing types, respectively.
Probab=34.05 E-value=81 Score=32.48 Aligned_cols=36 Identities=14% Similarity=0.178 Sum_probs=25.9
Q ss_pred HHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.+++ ..++|++|..+ ....+|+++|||++.+.
T Consensus 377 ~l~~~i~~~~~~~Dliig~s----~~~~~a~k~gip~~~~g 413 (461)
T TIGR02931 377 ELESRIKNQGLELDLILGHS----KGRFISIDYNIPMVRVG 413 (461)
T ss_pred HHHHHHHhcCCCCCEEEECc----chHHHHHHcCCCEEEec
Confidence 45555652 15799999974 35678999999998653
No 233
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=33.28 E-value=2e+02 Score=28.30 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=25.7
Q ss_pred cccCceeEEEecCCcch---HHHHHhcCCceeec
Q psy11555 318 LDHPNVKVFISHGGFLG---TTEALYSGVPIIGI 348 (484)
Q Consensus 318 l~h~~~~~~IthgG~~s---~~Eal~~gvP~i~~ 348 (484)
+..-+-+++|++||+-| +..|...|+|+++.
T Consensus 87 ~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 87 IRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 34456689999999986 89999999999873
No 234
>cd01971 Nitrogenase_VnfN_like Nitrogenase_vnfN_like: VnfN subunit of the VnfEN complex-like. This group in addition to VnfN contains a subset of the beta subunit of the nitrogenase MoFe protein and NifN-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protien for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=32.54 E-value=79 Score=32.19 Aligned_cols=36 Identities=17% Similarity=0.071 Sum_probs=26.2
Q ss_pred HHHHHhhcCC----CccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSK----KYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~----~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
++.+.++ +. ++|++|.++. ...+|+++|+|++.++.
T Consensus 358 ~~~~~i~-~~~~~~~~dliig~s~----~~~~a~~~~ip~i~~~~ 397 (427)
T cd01971 358 AIGQSLR-QSDFKYKPPIIFGSSW----ERDLAKELGGKILEVSF 397 (427)
T ss_pred HHHHHHH-hCCCCCCCCEEEechH----HHHHHHHcCCCeEEEeC
Confidence 4556665 44 4999999844 45689999999987653
No 235
>PF07069 PRRSV_2b: Porcine reproductive and respiratory syndrome virus 2b ; InterPro: IPR009775 This family consists of several Porcine reproductive and respiratory syndrome virus (PRRSV) ORF2b proteins. The function of this family is unknown however it is known that large amounts of 2b protein are present in the virion and it is thought that this protein may be an integral component of the virion [].
Probab=32.54 E-value=1.1e+02 Score=21.19 Aligned_cols=36 Identities=25% Similarity=0.480 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHH--HHHH---HHHHHHHHhhccccccc
Q psy11555 446 LDVIIALILLIAAMV--WSIQ---WLVRYALITYYNTVDDK 481 (484)
Q Consensus 446 lDv~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~ 481 (484)
.|++.++.+++.+.+ |+.. +++...+.+....+|+.
T Consensus 27 vdiiiflailfgftiagwlvvfcirlv~sailr~r~aih~e 67 (73)
T PF07069_consen 27 VDIIIFLAILFGFTIAGWLVVFCIRLVCSAILRARSAIHPE 67 (73)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcccccChH
Confidence 566655544333222 2322 33333444555555543
No 236
>cd00633 Secretoglobin Secretoglobins are relatively small, secreted, disulphide-bridged dimeric proteins with encoding genes sharing substantial sequence similarity. Their family subunits may be grouped into five subfamilies, A-E. Uteroglobin (subfamily A), which is identical to Clara cell protein (CC10), forms a globular shaped homodimer with a large hydrophobic pocket located between the two dimers. The uteroglobin monomer structure is composed of four alpha helices that do not form a canonical four helix-bundle motif but rather a boomerang-shaped structure in which helices H1, H3, and H4 are able to bind a homodimeric partner. The hydrophobic pocket binds steroids, particularly progesterone, with high specificity. However, the true biological function of uteroglobin is poorly understood. In mammals, uteroglobin has immunosuppressive and anti-inflammatory properties through the inhibition of phospholipase A2. The other four main subfamilies of secretoglobins are found in heterodimeri
Probab=32.27 E-value=1.9e+02 Score=20.61 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 376 TEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 376 ~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
+.+.+...+...-.++..++++.++++-+..++..-...+...++.+...
T Consensus 15 s~~~y~~~L~~f~~~~~~~~A~~~lK~C~d~~~~e~k~~~~~~m~~I~~S 64 (67)
T cd00633 15 SEEEYKAELEKFNATPEAVEAKEKLKQCVDEQSLETKENIAKLLEKILAS 64 (67)
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHhHHHHHHHHHHHHHcC
Confidence 77889999999988999999999999999987666677777888777653
No 237
>COG0391 Uncharacterized conserved protein [Function unknown]
Probab=32.09 E-value=4.6e+02 Score=25.56 Aligned_cols=149 Identities=15% Similarity=0.185 Sum_probs=77.4
Q ss_pred CCceEEEcccccCCCCCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCC-CC
Q psy11555 225 PNNVIEVAGLHVKSPQPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSG-KI 303 (484)
Q Consensus 225 ~p~v~~vG~~~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~-~~ 303 (484)
..++.++| ...+++.++.+++..+ ++ .|+++-||... +-+|.=.+..+.+|+++....++....-...+. ..
T Consensus 166 v~~V~~~~---~~~~~a~~eaveAI~~-AD--~IviGPgSl~T-SIlP~Lllp~I~eaLr~~~ap~i~v~n~~~~~g~~t 238 (323)
T COG0391 166 VHRVRLEG---PEKPSAAPEAVEAIKE-AD--LIVIGPGSLFT-SILPILLLPGIAEALRETVAPIVYVCNLMTQAGKET 238 (323)
T ss_pred ceEEEEec---CCCCCCCHHHHHHHHh-CC--EEEEcCCccHh-hhchhhchhHHHHHHHhCCCCEEEeccCCCCCCccc
Confidence 34566665 2234455555655433 43 88999999875 457878889999999886666555432111111 11
Q ss_pred CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcC-Cceeecc--CCCchHHHHHHHHHcCcEEEecCCCCCHHHH
Q psy11555 304 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSG-VPIIGIP--MFGDQKANIRVVEKAGFGVTLPYDQITEETV 380 (484)
Q Consensus 304 ~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~g-vP~i~~P--~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l 380 (484)
+++...+. +. .+.+..-.+ +=.+++. -..+|..+ +++++.+.-+..+...++.+.+
T Consensus 239 ~~~~~~d~-----------i~---------~i~~~~g~~~iD~vivd~~~~~~~~~~-~~~~~~~~~V~~~~~~~~~~~~ 297 (323)
T COG0391 239 DGLSVEDH-----------IA---------ALAQHYGAFVIDAVIVDNDDVEDEDLI-RYVEEKGLEVEIDPTLLDREGL 297 (323)
T ss_pred ccccHHHH-----------HH---------HHHHHhCcccCcEEEECCCCccHHHHH-HHhhhcCceeEechhhhhchhh
Confidence 11111110 00 111211112 2223332 24577777 7888888777777666666666
Q ss_pred HHHHHHHhCCHHHHHHHHHHH
Q psy11555 381 LVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 381 ~~ai~~~l~~~~~~~~a~~~~ 401 (484)
...+.+-+...+.+...+.++
T Consensus 298 ~~~~~~~~~~~~~~h~~~~~~ 318 (323)
T COG0391 298 RRALARNLLKLEVRHDPKKLA 318 (323)
T ss_pred HHHHHHHhhhhhhhhhHHHHH
Confidence 555544432333344344333
No 238
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=31.52 E-value=3.4e+02 Score=23.51 Aligned_cols=75 Identities=17% Similarity=0.129 Sum_probs=40.8
Q ss_pred hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEec
Q psy11555 250 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISH 329 (484)
Q Consensus 250 l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~Ith 329 (484)
+..+ +.+.+++.|+.. -..+.+..-+...+..+....+ . ....+...|+ -++|++
T Consensus 30 i~~a-~~I~i~G~G~S~-------~~A~~~~~~l~~~g~~~~~~~~-~----------~~~~~~~~D~------vI~iS~ 84 (179)
T cd05005 30 ILNA-KRIFVYGAGRSG-------LVAKAFAMRLMHLGLNVYVVGE-T----------TTPAIGPGDL------LIAISG 84 (179)
T ss_pred HHhC-CeEEEEecChhH-------HHHHHHHHHHHhCCCeEEEeCC-C----------CCCCCCCCCE------EEEEcC
Confidence 3344 367777777662 2333444445555555444211 0 0123334444 489999
Q ss_pred CCcch-----HHHHHhcCCceeecc
Q psy11555 330 GGFLG-----TTEALYSGVPIIGIP 349 (484)
Q Consensus 330 gG~~s-----~~Eal~~gvP~i~~P 349 (484)
+|.+. +..|-..|+|+|++=
T Consensus 85 sG~t~~~i~~~~~ak~~g~~iI~IT 109 (179)
T cd05005 85 SGETSSVVNAAEKAKKAGAKVVLIT 109 (179)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEE
Confidence 99653 445566788888763
No 239
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=31.46 E-value=44 Score=33.89 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=24.5
Q ss_pred HHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEE
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~ 125 (484)
+.+.++ +.++|++|..+. .-.+|+++|||++.+
T Consensus 350 ~~~~~~-~~~pdliig~s~----~~~~a~~lgip~~~~ 382 (415)
T cd01977 350 FFEILE-MLKPDIILTGPR----VGELVKKLHVPYVNI 382 (415)
T ss_pred HHHHHH-hcCCCEEEecCc----cchhhhhcCCCEEec
Confidence 444555 678999999854 225899999999875
No 240
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=31.43 E-value=38 Score=34.81 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=26.5
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++ ..++|++|.... ...+|+++|||++.+.
T Consensus 386 e~~~~i~-~~~pDllig~~~----~~~~a~k~gip~~~~~ 420 (457)
T TIGR01284 386 ELEEIIE-KYKPDIILTGIR----EGELAKKLGVPYINIH 420 (457)
T ss_pred HHHHHHH-hcCCCEEEecCC----cchhhhhcCCCEEEcc
Confidence 4556666 779999999854 3458999999998763
No 241
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=31.37 E-value=1.3e+02 Score=27.83 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=24.1
Q ss_pred CccEEE-EcccchhhHHHHHHHhCCCEEEEeCCCCch
Q psy11555 97 KYDLII-TEVFNTDCFLGFVYKFKVPYIAVSAAHIIP 132 (484)
Q Consensus 97 ~~DlvI-~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~ 132 (484)
-||+++ +|+...--+..=|.++|||+|.+.-+...|
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~dp 192 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNCDP 192 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCCCC
Confidence 499865 555544445556788999999876655433
No 242
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=31.27 E-value=1.1e+02 Score=24.12 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=29.2
Q ss_pred CCHHHHHHhhcCCCccEEEEcccc------hhhHHHHHHHhCCCEEE
Q psy11555 84 STKAALDLLHSSKKYDLIITEVFN------TDCFLGFVYKFKVPYIA 124 (484)
Q Consensus 84 ~~~~l~~~l~~~~~~DlvI~d~~~------~~~~~~~A~~l~iP~i~ 124 (484)
.++.+.++++ +.++|+||.-..- .......|-.+|||++.
T Consensus 55 ~~~~i~~~i~-~~~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 55 GRPNIVDLIK-NGEIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred CchhHHHHHH-cCCeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 4577889998 8899999995321 12344578888999984
No 243
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=31.22 E-value=98 Score=29.22 Aligned_cols=48 Identities=13% Similarity=0.229 Sum_probs=32.1
Q ss_pred HHhCCHHHHHHhh-------cCCCccEEEEccc-chhhHHHHHHHhCCCEEEEeCC
Q psy11555 81 AVMSTKAALDLLH-------SSKKYDLIITEVF-NTDCFLGFVYKFKVPYIAVSAA 128 (484)
Q Consensus 81 ~~l~~~~l~~~l~-------~~~~~DlvI~d~~-~~~~~~~~A~~l~iP~i~~~~~ 128 (484)
.++.+|++.+.+- ...++|+|++-.. .-+.+..+|..+|+|++..--.
T Consensus 105 ~ll~~P~~l~~ig~~la~~~~~~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~ 160 (268)
T TIGR01743 105 DILGKPSILSKIGKILASVFAEREIDAVMTVATKGIPLAYAVASVLNVPLVIVRKD 160 (268)
T ss_pred hhhcCHHHHHHHHHHHHHHhcCCCCCEEEEEccchHHHHHHHHHHHCCCEEEEEEC
Confidence 3455665543331 2557999987643 2367778999999999887653
No 244
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=31.03 E-value=83 Score=26.04 Aligned_cols=58 Identities=19% Similarity=0.280 Sum_probs=30.4
Q ss_pred EEecccCcccccccCceeEE-EecCCcchHHHHHhc---------CC-ceeeccC--CCchHH-HHHHHHHcC
Q psy11555 307 LLKSWAPQRDILDHPNVKVF-ISHGGFLGTTEALYS---------GV-PIIGIPM--FGDQKA-NIRVVEKAG 365 (484)
Q Consensus 307 ~~~~~~pq~~ll~h~~~~~~-IthgG~~s~~Eal~~---------gv-P~i~~P~--~~dQ~~-na~~~~~~G 365 (484)
.+..+.-...++.. .+++| +..||.||+.|.... .+ |++++-. +.|... ..+++.+.|
T Consensus 39 ~~~~~~~Rk~~m~~-~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~~l~~~l~~~~~~g 110 (133)
T PF03641_consen 39 IVDDMFERKEIMIE-SSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWDPLLEFLDRMIEEG 110 (133)
T ss_dssp EESSHHHHHHHHHH-HESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCHHHHHHHHHHHHTT
T ss_pred EeCChHHHHHHHHH-hCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHHHHHHHHHHHHHCC
Confidence 33333344455543 44544 578889998776432 34 9988752 333333 233445555
No 245
>PF02038 ATP1G1_PLM_MAT8: ATP1G1/PLM/MAT8 family; InterPro: IPR000272 The FXYD protein family contains at least seven members in mammals []. Two other family members that are not obvious orthologs of any identified mammalian FXYD protein exist in zebrafish. All these proteins share a signature sequence of six conserved amino acids comprising the FXYD motif in the NH2-terminus, and two glycines and one serine residue in the transmembrane domain. FXYD proteins are widely distributed in mammalian tissues with prominent expression in tissues that perform fluid and solute transport or that are electrically excitable. Initial functional characterisation suggested that FXYD proteins act as channels or as modulators of ion channels however studies have revealed that most FXYD proteins have another specific function and act as tissue-specific regulatory subunits of the Na,K-ATPase. Each of these auxiliary subunits produces a distinct functional effect on the transport characteristics of the Na,K-ATPase that is adjusted to the specific functional demands of the tissue in which the FXYD protein is expressed. FXYD proteins appear to preferentially associate with Na,K-ATPase alpha1-beta isozymes, and affect their function in a way that render them operationally complementary or supplementary to coexisting isozymes.; GO: 0005216 ion channel activity, 0006811 ion transport, 0016020 membrane; PDB: 2JO1_A 2JP3_A 2ZXE_G 3A3Y_G 3N23_E 3B8E_H 3KDP_G 3N2F_E.
Probab=30.99 E-value=86 Score=21.06 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 440 WWQYILLDVIIALILLIAAMVWSIQWLVRYA 470 (484)
Q Consensus 440 ~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
+|.|..|-+-.++++.+++++-++..+.+++
T Consensus 8 ~YDy~tLrigGLi~A~vlfi~Gi~iils~kc 38 (50)
T PF02038_consen 8 YYDYETLRIGGLIFAGVLFILGILIILSGKC 38 (50)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHHHHCTTHH
T ss_pred ccchhHhhccchHHHHHHHHHHHHHHHcCcc
Confidence 4678888887777766666555554444444
No 246
>PF14979 TMEM52: Transmembrane 52
Probab=30.87 E-value=1.1e+02 Score=25.70 Aligned_cols=30 Identities=10% Similarity=0.176 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHhhc
Q psy11555 446 LDVIIALILLIAAMVWSIQWL-VRYALITYY 475 (484)
Q Consensus 446 lDv~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 475 (484)
+-|+++++++++++++.+... +|+++.+..
T Consensus 20 WyIwLill~~~llLLCG~ta~C~rfCClrk~ 50 (154)
T PF14979_consen 20 WYIWLILLIGFLLLLCGLTASCVRFCCLRKQ 50 (154)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 557777777777777655544 444655555
No 247
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=30.34 E-value=55 Score=33.69 Aligned_cols=31 Identities=29% Similarity=0.413 Sum_probs=23.2
Q ss_pred HHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEE
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYI 123 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i 123 (484)
+.+.++ +.++|++|..+. ...+|+++|||++
T Consensus 389 ~~~~~~-~~~pDliig~s~----~~~~A~klgiP~v 419 (461)
T TIGR01860 389 FFEVLD-LIKPDVIFTGPR----VGELVKKLHIPYV 419 (461)
T ss_pred HHHHHH-hcCCCEEEeCCc----chhhHhhcCCCEE
Confidence 334555 678999999854 3458999999997
No 248
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=29.94 E-value=1.1e+02 Score=27.01 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=27.2
Q ss_pred HHHHhhcCCCc--cEEEEcccchhhHHHHHHHhCCCEEEEeCCC
Q psy11555 88 ALDLLHSSKKY--DLIITEVFNTDCFLGFVYKFKVPYIAVSAAH 129 (484)
Q Consensus 88 l~~~l~~~~~~--DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~ 129 (484)
+.++++ +... .++|..++....+..+|+++++|.|.+.+.-
T Consensus 49 l~~~i~-~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 49 LEQLIE-ELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred HHHHHH-hCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 445554 3333 3666666655566679999999998887654
No 249
>TIGR02932 vnfK_nitrog V-containing nitrogenase, beta subunit. Nitrogenase is the enzyme of biological nitrogen fixation. The most wide-spread and most efficient nitrogenase contains a molybdenum cofactor. This protein family, VnfK, represents the beta subunit of the vanadium (V)-containing alternative nitrogenase. It is homologous to NifK and AnfK, of the molybdenum-containing and the iron (Fe)-only types, respectively.
Probab=29.94 E-value=92 Score=32.06 Aligned_cols=36 Identities=14% Similarity=0.101 Sum_probs=25.2
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++...++|++|..+. ...+|+++|||++.+.
T Consensus 374 el~~~l~~~~~~dllig~s~----~~~~A~klgip~~~~g 409 (457)
T TIGR02932 374 ELEKRIKAKLDIDLIMGHSK----GRYVAIDANIPMVRVG 409 (457)
T ss_pred HHHHHHhhcCCCCEEEECCc----hHHHHHHcCCCEEEec
Confidence 34444432458999999843 4668999999998654
No 250
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=29.85 E-value=19 Score=31.57 Aligned_cols=33 Identities=27% Similarity=0.526 Sum_probs=22.7
Q ss_pred ccCceeEEEecCCcchHHHHHhcCCceeeccCCC
Q psy11555 319 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFG 352 (484)
Q Consensus 319 ~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~ 352 (484)
.+..++++|++||...+..... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4578999999999888877776 99999998754
No 251
>TIGR00345 arsA arsenite-activated ATPase (arsA). The N-terminal 50 amino acids hits Pfam families NB-ARC and fer4_NifH. residues 4-11 of the seed alignment contain a potential ATP binding site. The function of the gene product is to catalyze the extrusion of the oxyanions arsenite, antimonite and arsenate for detoxification. Some members of this family contain a duplication so the model finds hits twice.
Probab=29.20 E-value=1.8e+02 Score=27.66 Aligned_cols=17 Identities=29% Similarity=0.428 Sum_probs=14.6
Q ss_pred hhhhcCCeEEEEeecCC
Q psy11555 2 GLTDHGHVVDILSHFPQ 18 (484)
Q Consensus 2 ~L~~rGH~Vtvvt~~~~ 18 (484)
.++++|++|-+++.+|.
T Consensus 8 ~~a~~g~~vllv~~Dp~ 24 (284)
T TIGR00345 8 RLAEQGKKVLLVSTDPA 24 (284)
T ss_pred HHHHCCCeEEEEECCCC
Confidence 47899999999999764
No 252
>cd02991 UAS_ETEA UAS family, ETEA subfamily; composed of proteins similar to human ETEA protein, the translation product of a highly expressed gene in the T-cells and eosinophils of atopic dermatitis patients compared with those of normal individuals. ETEA shows homology to Fas-associated factor 1 (FAF1); both containing UAS and UBX (ubiquitin-associated) domains. Compared to FAF1, however, ETEA lacks the ubiquitin-associated UBA domain and a nuclear targeting domain. The function of ETEA is still unknown. A yeast two-hybrid assay showed that it can interact with Fas. Because of its homology to FAF1, it is postulated that ETEA could be involved in modulating Fas-mediated apoptosis of T-cells and eosinophils of atopic dermatitis patients, making them more resistant to apoptosis.
Probab=28.96 E-value=1.9e+02 Score=23.30 Aligned_cols=50 Identities=8% Similarity=0.223 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCC---CEEEEe
Q psy11555 74 SGEDTCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKV---PYIAVS 126 (484)
Q Consensus 74 ~~~~~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~i---P~i~~~ 126 (484)
.....|+.+|.++++.+.|+ .+|=+.-.|.. ..-+..+|..+++ |.+.+.
T Consensus 31 ~~~~fc~~~l~~~~v~~~ln--~~fv~w~~dv~-~~eg~~la~~l~~~~~P~~~~l 83 (116)
T cd02991 31 DTDEFCRNTLCAPEVIEYIN--TRMLFWACSVA-KPEGYRVSQALRERTYPFLAMI 83 (116)
T ss_pred cHHHHHHHHcCCHHHHHHHH--cCEEEEEEecC-ChHHHHHHHHhCCCCCCEEEEE
Confidence 35678999999999999996 36755566654 3456778888864 876543
No 253
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=28.16 E-value=1.3e+02 Score=17.48 Aligned_cols=23 Identities=9% Similarity=0.238 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 445 LLDVIIALILLIAAMVWSIQWLV 467 (484)
Q Consensus 445 ~lDv~~~~~~~~~~~~~~~~~~~ 467 (484)
+++|+.=.+++++++.|++|.++
T Consensus 2 s~~vi~g~llv~lLl~YLvYAL~ 24 (29)
T PRK14750 2 NFSIVCGALLVLLLLGYLVYALF 24 (29)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHc
Confidence 35555544455555556665543
No 254
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=27.99 E-value=82 Score=32.48 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=23.7
Q ss_pred ChhhhcCCeEEEEeecCCCCCCCCceEEeeccc
Q psy11555 1 MGLTDHGHVVDILSHFPQSSKIPNYNDISVEGS 33 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~~~~~~~~~i~~~~~ 33 (484)
+++..||++||+|+..-....+.+++.+.+...
T Consensus 290 ~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta 322 (475)
T PRK13982 290 AAAAAAGAEVTLISGPVDLADPQGVKVIHVESA 322 (475)
T ss_pred HHHHHCCCcEEEEeCCcCCCCCCCceEEEecCH
Confidence 367899999999996432234567888888754
No 255
>PRK06524 biotin carboxylase-like protein; Validated
Probab=27.70 E-value=96 Score=32.09 Aligned_cols=53 Identities=8% Similarity=0.017 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHhCCHHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEE
Q psy11555 71 LPISGEDTCEAVMSTKAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 71 ~~~~~~~~c~~~l~~~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~ 125 (484)
-.+-....|+.++++++++++++. ..++-+++.. ...+...+++.+|||++.-
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~--~DG~iQ~lLE~lGIpy~gP 132 (493)
T PRK06524 79 DFDGMEDVCNYLLRHPETLEFIKRRGPGGKACFVM--FDEETEALARQAGLEVMHP 132 (493)
T ss_pred hhhhhHHHhhhhhcCHHHHHHHHhhCCCCceEEec--CCHHHHHHHHHCCCeEECc
Confidence 344566789999999999999983 2245555554 3578888999999998653
No 256
>PHA02649 hypothetical protein; Provisional
Probab=27.43 E-value=2.8e+02 Score=21.14 Aligned_cols=43 Identities=23% Similarity=0.238 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHcCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHH
Q psy11555 410 PPLDTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAM 459 (484)
Q Consensus 410 ~~~~~~~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~~~~~~~~~ 459 (484)
..-|+.++.|-+-+++.....+|| +-+..+|++.++.++..++
T Consensus 17 ~~NEK~lDcII~eie~~~~~i~RP-------fiRL~iDvlil~iV~~~~~ 59 (95)
T PHA02649 17 YGNEKIIDCIIYEIENTQYVIVRP-------ILRLIVDLMILLIVLNDVI 59 (95)
T ss_pred hhhhHHHHHHHHHHHHcCchHHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 445667777777677765566776 5577899987765544443
No 257
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=27.27 E-value=1.6e+02 Score=21.50 Aligned_cols=45 Identities=18% Similarity=0.044 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 413 DTAIYWIEHVIRHGGGAHLRPASLELYWWQYILLDVIIALILLIAAMVWSIQWLVRYALI 472 (484)
Q Consensus 413 ~~~~~~ie~~~~~~~~~~l~~~~~~~~~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
+-+.+.|+|+++.++ .|+.|.. +++.=++++..++.+++.+-+-+
T Consensus 6 ~w~~~~v~~vAkdP~-----------~Fl~~vl----l~LtPlfiisa~lSwkLaK~ie~ 50 (74)
T PF15086_consen 6 AWASYIVEWVAKDPY-----------EFLTTVL----LILTPLFIISAVLSWKLAKAIEK 50 (74)
T ss_pred HHHHHHHHHHHcChH-----------HHHHHHH----HHHhHHHHHHHHHHHHHHHHHHH
Confidence 335566777777642 3444422 22222334444566666666543
No 258
>PLN02470 acetolactate synthase
Probab=27.15 E-value=92 Score=33.19 Aligned_cols=88 Identities=19% Similarity=0.244 Sum_probs=51.4
Q ss_pred eecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCC----C--CCcEEEecccC-cccc-------cccCceeEE
Q psy11555 261 SMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSG----K--IDKILLKSWAP-QRDI-------LDHPNVKVF 326 (484)
Q Consensus 261 s~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~----~--~~nv~~~~~~p-q~~l-------l~h~~~~~~ 326 (484)
+|||.... ..+...-+.+++.|++.+.+.++.+.++.... + .++++++.--- +... ....+..++
T Consensus 2 ~~~~~~~~-~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~l~dal~~~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv~ 80 (585)
T PLN02470 2 TFQSRFAP-DEPRKGADILVEALEREGVDTVFAYPGGASMEIHQALTRSNCIRNVLCRHEQGEVFAAEGYAKASGKVGVC 80 (585)
T ss_pred CcccCCCC-CccccHHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHhccCCceEEEeccHHHHHHHHHHHHHHhCCCEEE
Confidence 35665432 23344567788888888887777766642111 1 12333332110 0000 012456788
Q ss_pred EecCCc------chHHHHHhcCCceeecc
Q psy11555 327 ISHGGF------LGTTEALYSGVPIIGIP 349 (484)
Q Consensus 327 IthgG~------~s~~Eal~~gvP~i~~P 349 (484)
++|.|- +++.||...++|+|++.
T Consensus 81 ~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 81 IATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred EECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 888884 46899999999999983
No 259
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=27.13 E-value=1.3e+02 Score=23.99 Aligned_cols=41 Identities=15% Similarity=0.241 Sum_probs=28.6
Q ss_pred CCHHHHHHhhcC-CCccEEEEcc--cc-------hhhHHHHHHHhCCCEEEE
Q psy11555 84 STKAALDLLHSS-KKYDLIITEV--FN-------TDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 84 ~~~~l~~~l~~~-~~~DlvI~d~--~~-------~~~~~~~A~~l~iP~i~~ 125 (484)
.++.+.++++ + .++|+||.-. .. .......|-..+||++..
T Consensus 55 g~~~i~~~i~-~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~ 105 (112)
T cd00532 55 GEPTVDAAIA-EKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTP 105 (112)
T ss_pred CCcHHHHHHh-CCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEEC
Confidence 4577899998 8 8999999832 11 122334677889999763
No 260
>PF14851 FAM176: FAM176 family
Probab=26.80 E-value=78 Score=27.01 Aligned_cols=23 Identities=4% Similarity=-0.045 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 449 IIALILLIAAMVWSIQWLVRYAL 471 (484)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
|+++.+|+.+++.++..+++..|
T Consensus 25 YFv~gVC~GLlLtLcllV~risc 47 (153)
T PF14851_consen 25 YFVSGVCAGLLLTLCLLVIRISC 47 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhee
Confidence 44455666666666666777777
No 261
>cd01973 Nitrogenase_VFe_beta_like Nitrogenase_VFe_beta -like: Nitrogenase VFe protein, beta subunit like. This group contains proteins similar to the beta subunits of the VFe protein of the vanadium-dependent (V-) nitrogenase. Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V-nitrogenase there is a molybdenum (Mo)-dependent nitrogenase and an iron only (Fe-) nitrogenase. The Mo-nitrogenase is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe p
Probab=26.44 E-value=1e+02 Score=31.66 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=25.6
Q ss_pred HHHHHhhcC-CCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSS-KKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~-~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++.. .++|++|..+. ...+|+++|+|++.+.
T Consensus 370 e~~~~i~~~~~~~dliig~s~----~~~~A~~~gip~~~~g 406 (454)
T cd01973 370 ELEKRIKNKGLELDLILGHSK----GRYIAIDNNIPMVRVG 406 (454)
T ss_pred HHHHHHHhcCCCCCEEEECCc----cHHHHHHcCCCEEEec
Confidence 445566522 46999999844 4668999999997754
No 262
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=26.30 E-value=4.1e+02 Score=22.69 Aligned_cols=134 Identities=16% Similarity=0.237 Sum_probs=73.1
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCcEE-EEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcc--
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRV-IWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFL-- 333 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~-i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~-- 333 (484)
.|-+-+||. ...+.++...+.|+.++..+ .++.+....++ . ...|... ......+++|.-+|.-
T Consensus 4 ~V~IIMGS~-----SD~~~mk~Aa~~L~~fgi~ye~~VvSAHRTPe---~--m~~ya~~---a~~~g~~viIAgAGgAAH 70 (162)
T COG0041 4 KVGIIMGSK-----SDWDTMKKAAEILEEFGVPYEVRVVSAHRTPE---K--MFEYAEE---AEERGVKVIIAGAGGAAH 70 (162)
T ss_pred eEEEEecCc-----chHHHHHHHHHHHHHcCCCeEEEEEeccCCHH---H--HHHHHHH---HHHCCCeEEEecCcchhh
Confidence 466678888 34678888999999887643 33333322221 0 1111111 1125577888877732
Q ss_pred --hHHHHHhcCCceeeccCCCc---hHHHHHHHHHc--Cc--EEE-ecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy11555 334 --GTTEALYSGVPIIGIPMFGD---QKANIRVVEKA--GF--GVT-LPYDQITEETVLVALRTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 334 --s~~Eal~~gvP~i~~P~~~d---Q~~na~~~~~~--G~--g~~-l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~ 403 (484)
++..|. .-+|+|++|.... -.+----+.+. |+ |.+ +. +..+..-|.-.|-- +.|++++++..+..+.
T Consensus 71 LPGmvAa~-T~lPViGVPv~s~~L~GlDSL~SiVQMP~GvPVaTvaIg-~a~NAallAa~ILa-~~d~~l~~kl~~~r~~ 147 (162)
T COG0041 71 LPGMVAAK-TPLPVIGVPVQSKALSGLDSLLSIVQMPAGVPVATVAIG-NAANAALLAAQILA-IKDPELAEKLAEFREA 147 (162)
T ss_pred cchhhhhc-CCCCeEeccCccccccchHHHHHHhcCCCCCeeEEEeec-chhhHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 233333 3799999998621 11222334444 43 222 22 22344444444432 4689999999888776
Q ss_pred HhC
Q psy11555 404 FQD 406 (484)
Q Consensus 404 ~~~ 406 (484)
.++
T Consensus 148 ~~~ 150 (162)
T COG0041 148 QTE 150 (162)
T ss_pred HHH
Confidence 654
No 263
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=26.23 E-value=68 Score=32.60 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=27.1
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++ +.+||++|.... ...+|+++|||++.+.
T Consensus 360 e~~~~i~-~~~pDliig~~~----~~~~a~k~giP~~~~~ 394 (421)
T cd01976 360 ELEEFVK-RLKPDLIGSGIK----EKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHH-HhCCCEEEecCc----chhhhhhcCCCeEeCC
Confidence 4666776 779999999854 4557999999997654
No 264
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=26.20 E-value=1.1e+02 Score=30.71 Aligned_cols=40 Identities=8% Similarity=0.015 Sum_probs=28.6
Q ss_pred HHHHHhhcCCCccEEEEcccch------hhHHH---HHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNT------DCFLG---FVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~------~~~~~---~A~~l~iP~i~~~~ 127 (484)
++.++++ ..+||++|+.+.++ .|+.. +.+.++||.+.-..
T Consensus 67 ~i~~mv~-k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaMy 115 (431)
T TIGR01917 67 KVLEMIK-GANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAMY 115 (431)
T ss_pred HHHHHHH-hcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEec
Confidence 4677787 88999999998653 23322 45679999886543
No 265
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=26.16 E-value=1.1e+02 Score=30.69 Aligned_cols=40 Identities=23% Similarity=0.247 Sum_probs=28.6
Q ss_pred HHHHHhhcCCCccEEEEcccch------hhHHH---HHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVFNT------DCFLG---FVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~------~~~~~---~A~~l~iP~i~~~~ 127 (484)
++.++++ ..+||++|+.+.++ .|+.. +.+.++||.|.-..
T Consensus 67 ~i~~mv~-k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~My 115 (431)
T TIGR01918 67 RVLEMLK-DKEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSMY 115 (431)
T ss_pred HHHHHHH-hcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEec
Confidence 4677787 88999999998653 23322 45679999886543
No 266
>KOG0081|consensus
Probab=26.02 E-value=1.7e+02 Score=25.08 Aligned_cols=36 Identities=19% Similarity=0.275 Sum_probs=26.5
Q ss_pred CCCccEEEEcccc---------hhhHHHHHHHhCCCEEEEeCCCC
Q psy11555 95 SKKYDLIITEVFN---------TDCFLGFVYKFKVPYIAVSAAHI 130 (484)
Q Consensus 95 ~~~~DlvI~d~~~---------~~~~~~~A~~l~iP~i~~~~~~~ 130 (484)
.++||+|++..-. ..-+..+|+++|+|++-.+...-
T Consensus 122 cE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~tg 166 (219)
T KOG0081|consen 122 CENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSACTG 166 (219)
T ss_pred cCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccccC
Confidence 6799999997531 13455689999999988776543
No 267
>smart00594 UAS UAS domain.
Probab=25.90 E-value=2.1e+02 Score=23.06 Aligned_cols=51 Identities=18% Similarity=0.194 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhC---CCEEEEe
Q psy11555 73 ISGEDTCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFK---VPYIAVS 126 (484)
Q Consensus 73 ~~~~~~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~---iP~i~~~ 126 (484)
..-...|+.++.++++.+.++ + +|=++-.|.. ..=+..++..++ .|.+.+.
T Consensus 40 ~~c~~~~r~vl~~~~V~~~i~-~-~fv~~~~dv~-~~eg~~l~~~~~~~~~P~~~~l 93 (122)
T smart00594 40 PDSQVFNRDVLCNEAVKSLIR-E-NFIFWQVDVD-TSEGQRVSQFYKLDSFPYVAIV 93 (122)
T ss_pred chHHHHHHHHccCHHHHHHHH-c-CEEEEEecCC-ChhHHHHHHhcCcCCCCEEEEE
Confidence 355578899999999999996 3 5666667765 345667888885 4876544
No 268
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=25.88 E-value=1.3e+02 Score=29.41 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=61.5
Q ss_pred ceEEEEeec-ceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-------CCCCcEEEecccC--c-ccccccCce
Q psy11555 255 NGVIYFSMG-SIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------GKIDKILLKSWAP--Q-RDILDHPNV 323 (484)
Q Consensus 255 ~~~v~vs~G-s~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-------~~~~nv~~~~~~p--q-~~ll~h~~~ 323 (484)
++.|.+.-| +.......+.+....+++.+.+.+.++++.+++++.. ..+..+.+.+-.+ | ..++ ..+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li--~~a 252 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALI--AGA 252 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHH--hcC
Confidence 478999999 5545567899999999999988887777766653211 1222222333332 2 2344 568
Q ss_pred eEEEecCCcchHHHHHhcCCceeec
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
+++|+.-. |-++=|.+.|+|+|++
T Consensus 253 ~l~I~~DS-g~~HlAaA~~~P~I~i 276 (334)
T COG0859 253 DLVIGNDS-GPMHLAAALGTPTIAL 276 (334)
T ss_pred CEEEccCC-hHHHHHHHcCCCEEEE
Confidence 88887764 5788888999999986
No 269
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=25.71 E-value=92 Score=31.48 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=25.8
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEE
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~ 125 (484)
++.+.++ ..+||++|..+. ...+|+++|+|++.+
T Consensus 347 e~~~~i~-~~~pDl~ig~s~----~~~~a~~~gip~~~~ 380 (410)
T cd01968 347 ELKKLLK-EKKADLLVAGGK----ERYLALKLGIPFCDI 380 (410)
T ss_pred HHHHHHh-hcCCCEEEECCc----chhhHHhcCCCEEEc
Confidence 4556676 778999999844 346799999999854
No 270
>PHA02754 hypothetical protein; Provisional
Probab=25.47 E-value=1e+02 Score=21.18 Aligned_cols=23 Identities=4% Similarity=0.303 Sum_probs=18.0
Q ss_pred HHHHhCCHHHHHHHHHHHHHHhC
Q psy11555 384 LRTVLGNPSYKKRAEKVARLFQD 406 (484)
Q Consensus 384 i~~~l~~~~~~~~a~~~~~~~~~ 406 (484)
|.+++.+..|++.|+++...+..
T Consensus 7 i~k~i~eK~Fke~MRelkD~LSe 29 (67)
T PHA02754 7 IPKAIMEKDFKEAMRELKDILSE 29 (67)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhh
Confidence 34455688999999999988865
No 271
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=25.18 E-value=2.1e+02 Score=32.40 Aligned_cols=100 Identities=12% Similarity=0.063 Sum_probs=56.6
Q ss_pred ccCcccccc-cCceeEEEe---cCCcc-hHHHHHhcCC---ceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q psy11555 311 WAPQRDILD-HPNVKVFIS---HGGFL-GTTEALYSGV---PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLV 382 (484)
Q Consensus 311 ~~pq~~ll~-h~~~~~~It---hgG~~-s~~Eal~~gv---P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 382 (484)
.+|+.++++ +..+++++. .-|+| ...|+++++. -+++++-+.. -|..+ ..-|+.+++. +.+++++
T Consensus 447 ~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaG---aa~~L--~~~AllVNP~--D~~~vA~ 519 (934)
T PLN03064 447 SLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAG---AAQSL--GAGAILVNPW--NITEVAA 519 (934)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCc---hHHHh--CCceEEECCC--CHHHHHH
Confidence 356665543 256677763 44666 4679999954 2222243331 22222 1257888876 7899999
Q ss_pred HHHHHhC-CHHH-HHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 383 ALRTVLG-NPSY-KKRAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 383 ai~~~l~-~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
+|.+.|+ +++- +++.+++.+.... ..+.+|++.++
T Consensus 520 AI~~AL~M~~~Er~~r~~~~~~~V~~------~d~~~Wa~~fl 556 (934)
T PLN03064 520 SIAQALNMPEEEREKRHRHNFMHVTT------HTAQEWAETFV 556 (934)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhccc------CCHHHHHHHHH
Confidence 9999987 5443 3333444444433 23455665544
No 272
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=24.89 E-value=86 Score=32.24 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=26.0
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++ ..+||++|.... ...+|+++|||++.++
T Consensus 386 e~~~~i~-~~~pDl~ig~~~----~~~~a~k~giP~i~~~ 420 (456)
T TIGR01283 386 ELLKLLL-EYKADLLIAGGK----ERYTALKLGIPFCDIN 420 (456)
T ss_pred HHHHHHh-hcCCCEEEEccc----hHHHHHhcCCCEEEcc
Confidence 4666666 778999998733 3457889999998753
No 273
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=24.83 E-value=1.2e+02 Score=26.26 Aligned_cols=31 Identities=13% Similarity=0.320 Sum_probs=22.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 288 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~ 288 (484)
+..+|+++||... .+.+.++..++.++..+.
T Consensus 7 ~~~v~i~LGSNlg---~~~~~l~~A~~~L~~~~~ 37 (163)
T PRK14092 7 SALAYVGLGANLG---DAAATLRSVLAELAAAPG 37 (163)
T ss_pred CCEEEEEecCchH---hHHHHHHHHHHHHHhCCC
Confidence 5678999999953 356667777777766554
No 274
>cd00316 Oxidoreductase_nitrogenase The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. This group contains both alpha and beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase) and, both subunits of Protochlorophyllide (Pchlide) reductase and chlorophyllide (chlide) reductase. The nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized nitrogenase is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers whose alpha and beta subunits are similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molec
Probab=24.58 E-value=1.2e+02 Score=30.43 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=26.1
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++ +.++|++|.+.. ....++++|+|++.++
T Consensus 339 ~~~~~~~-~~~pdl~ig~~~----~~~~~~~~~ip~~~~~ 373 (399)
T cd00316 339 ELEELIR-ELKPDLIIGGSK----GRYIAKKLGIPLVRIG 373 (399)
T ss_pred HHHHHHh-hcCCCEEEECCc----HHHHHHHhCCCEEEcC
Confidence 4556666 778999999843 4557888999997654
No 275
>PRK09213 pur operon repressor; Provisional
Probab=24.32 E-value=1.2e+02 Score=28.66 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=25.8
Q ss_pred CCCccEEEEccc-chhhHHHHHHHhCCCEEEEeCC
Q psy11555 95 SKKYDLIITEVF-NTDCFLGFVYKFKVPYIAVSAA 128 (484)
Q Consensus 95 ~~~~DlvI~d~~-~~~~~~~~A~~l~iP~i~~~~~ 128 (484)
..++|+|++-.. .-+.+..+|..+|+|++.+--.
T Consensus 128 ~~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~ 162 (271)
T PRK09213 128 DKKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRD 162 (271)
T ss_pred ccCCCEEEEEccccHHHHHHHHHHHCCCEEEEEEC
Confidence 557999987643 2367778999999999887653
No 276
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=24.17 E-value=1.4e+02 Score=26.14 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=29.5
Q ss_pred HHHHHhhcCCCccEEEEccc-chhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVF-NTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~-~~~~~~~~A~~l~iP~i~~~~ 127 (484)
.+.+.++ ..++|.|++-.. .-+.+..+|..+|+|+|.+-=
T Consensus 44 ~~~~~~~-~~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK 84 (179)
T COG0503 44 ELAERYK-DDGIDKIVTIEARGIPLAAAVALELGVPFVPVRK 84 (179)
T ss_pred HHHHHhc-ccCCCEEEEEccccchhHHHHHHHhCCCEEEEEe
Confidence 4556665 678999998653 225677799999999987654
No 277
>TIGR01861 ANFD nitrogenase iron-iron protein, alpha chain. This model represents the all-iron variant of the nitrogenase component I alpha chain. Molybdenum-iron and vanadium iron forms are also found. The complete complex contains two alpha chains, two beta chains and two delta chains. The component I associates with component II also known as the iron protein which serves to provide electrons for component I.
Probab=24.14 E-value=84 Score=32.85 Aligned_cols=33 Identities=27% Similarity=0.343 Sum_probs=24.5
Q ss_pred HHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEE
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~ 125 (484)
..+.++ ..++|++|.... ...+|+++|||++-.
T Consensus 390 ~~~~l~-~~~~Dllig~s~----~~~~A~k~gIP~ld~ 422 (513)
T TIGR01861 390 GLEAME-MLKPDIILTGKR----PGEVSKKMRVPYLNA 422 (513)
T ss_pred HHHHHH-hcCCCEEEecCc----cchhHhhcCCCEEEc
Confidence 334565 779999999854 235799999999664
No 278
>PHA02849 putative transmembrane protein; Provisional
Probab=24.09 E-value=1.8e+02 Score=21.45 Aligned_cols=22 Identities=23% Similarity=0.732 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy11555 448 VIIALILLIAAMVWSIQWLVRY 469 (484)
Q Consensus 448 v~~~~~~~~~~~~~~~~~~~~~ 469 (484)
|+.++++++.++.+++.+++++
T Consensus 19 vi~v~v~vI~i~~flLlyLvkw 40 (82)
T PHA02849 19 VILVFVLVISFLAFMLLYLIKW 40 (82)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555555554
No 279
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=24.04 E-value=94 Score=31.61 Aligned_cols=32 Identities=16% Similarity=0.229 Sum_probs=24.7
Q ss_pred HHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 90 DLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 90 ~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
+.++ +.++|++|.... +..+|+++|||++.+.
T Consensus 349 ~~l~-~~~pDllig~s~----~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 349 EAVL-EFEPDLAIGTTP----LVQFAKEHGIPALYFT 380 (422)
T ss_pred HHHh-hCCCCEEEcCCc----chHHHHHcCCCEEEec
Confidence 4455 779999999833 4457999999998864
No 280
>COG2011 AbcD ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]
Probab=23.99 E-value=1.2e+02 Score=27.38 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy11555 441 WQYILLDVIIALILLIAAMVWSIQWLVRYALITY 474 (484)
Q Consensus 441 ~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (484)
||+|+-||..+..+++++++.++.++-.++.++.
T Consensus 186 Y~Rf~~~Vm~~~viillilVq~iQ~~Gd~l~~r~ 219 (222)
T COG2011 186 YQRFNTDVMVVAVVILLILVQLIQSLGDRLVRRL 219 (222)
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999998888888888887776666655543
No 281
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=23.97 E-value=84 Score=32.53 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEE
Q psy11555 86 KAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIA 124 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~ 124 (484)
.++.+.++ ..++|++|..+. ...+|+++|||++.
T Consensus 383 ~e~~~~i~-~~~pDliig~s~----~~~~a~k~giP~~~ 416 (475)
T PRK14478 383 RELYKMLK-EAKADIMLSGGR----SQFIALKAGMPWLD 416 (475)
T ss_pred HHHHHHHh-hcCCCEEEecCc----hhhhhhhcCCCEEE
Confidence 34556666 778999999733 45689999999974
No 282
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=23.94 E-value=1.7e+02 Score=25.87 Aligned_cols=33 Identities=9% Similarity=0.076 Sum_probs=24.2
Q ss_pred CCCccEEEEcccc-hhhHHHHHHHhCCCEEEEeC
Q psy11555 95 SKKYDLIITEVFN-TDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 95 ~~~~DlvI~d~~~-~~~~~~~A~~l~iP~i~~~~ 127 (484)
...+|.|+.-..- -+.+..+|..+|+|++.+--
T Consensus 71 ~~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK 104 (187)
T PRK13810 71 EMDVDTVAGVELGGVPLATAVSLETGLPLLIVRK 104 (187)
T ss_pred cCCCCEEEEEccchHHHHHHHHHHhCCCEEEEec
Confidence 5589999986542 25666688899999987643
No 283
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=23.91 E-value=2.2e+02 Score=24.41 Aligned_cols=28 Identities=21% Similarity=0.339 Sum_probs=22.1
Q ss_pred ceeEEEecCCcc------hHHHHHhcCCceeecc
Q psy11555 322 NVKVFISHGGFL------GTTEALYSGVPIIGIP 349 (484)
Q Consensus 322 ~~~~~IthgG~~------s~~Eal~~gvP~i~~P 349 (484)
+..++++|+|-| ++.+|...++|+|++.
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 455777777744 6899999999999985
No 284
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.88 E-value=1.4e+02 Score=27.97 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=24.5
Q ss_pred CceeEEEecCCcchHHHHHh----cCCceeeccC
Q psy11555 321 PNVKVFISHGGFLGTTEALY----SGVPIIGIPM 350 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~----~gvP~i~~P~ 350 (484)
..++++|+=||=||++-|+. .++|++++-.
T Consensus 32 ~~~D~vi~iGGDGT~L~a~~~~~~~~iPilGIN~ 65 (259)
T PRK00561 32 DGADYLFVLGGDGFFVSTAANYNCAGCKVVGINT 65 (259)
T ss_pred CCCCEEEEECCcHHHHHHHHHhcCCCCcEEEEec
Confidence 34789999999999998865 5789998764
No 285
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=23.63 E-value=1.1e+02 Score=26.70 Aligned_cols=47 Identities=30% Similarity=0.404 Sum_probs=31.5
Q ss_pred hcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHH
Q psy11555 340 YSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRT 386 (484)
Q Consensus 340 ~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 386 (484)
..|+|-=-+=+|.|+..|...+.+.|+--++-++.+|.+.+.+.+++
T Consensus 119 ~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt~~~~~~gL~~ 165 (169)
T PF12689_consen 119 KTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLTWDEFERGLEK 165 (169)
T ss_dssp HH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--HHHHHHHHHH
T ss_pred hcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCCHHHHHHHHHH
Confidence 45666555556899999999999899888877788999988888864
No 286
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=23.31 E-value=7.2e+02 Score=25.21 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=32.7
Q ss_pred CHHHHHHhhcCCCccEEEEccc---chhhHHHHHHH---hCCCEEEEeCCCC
Q psy11555 85 TKAALDLLHSSKKYDLIITEVF---NTDCFLGFVYK---FKVPYIAVSAAHI 130 (484)
Q Consensus 85 ~~~l~~~l~~~~~~DlvI~d~~---~~~~~~~~A~~---l~iP~i~~~~~~~ 130 (484)
-+++.+.|+ +.+.|.||.-+. +.-|+..+++. .|||.|.+.+...
T Consensus 325 g~eIa~~Lk-~dgVDAvILtstCgtCtrcga~m~keiE~~GIPvV~i~~~~p 375 (431)
T TIGR01917 325 AKEFSKELL-AAGVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHICTVTP 375 (431)
T ss_pred HHHHHHHHH-HcCCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeechh
Confidence 346778887 889999998755 34566666655 4999998876543
No 287
>KOG0129|consensus
Probab=23.27 E-value=1.2e+02 Score=31.09 Aligned_cols=55 Identities=24% Similarity=0.504 Sum_probs=42.3
Q ss_pred ccEEEEeccCCCCCCCCCCC-ceEEEcccccCCCCCCc-cchHHHhhhcCceEEEEeecce
Q psy11555 207 TSLVLVNSHFTFIGSRPYPN-NVIEVAGLHVKSPQPLP-NDIKKFLDESVNGVIYFSMGSI 265 (484)
Q Consensus 207 ~~l~l~ns~~~l~~~~p~~p-~v~~vG~~~~~~~~~l~-~~l~~~l~~~~~~~v~vs~Gs~ 265 (484)
....+.++++..+..+|+.| .+++|||++ .+|. ++|..+++.-=++++|+..-+-
T Consensus 350 rPW~laDs~fv~d~sq~lDprrTVFVGgvp----rpl~A~eLA~imd~lyGgV~yaGIDtD 406 (520)
T KOG0129|consen 350 RPWVLADSDFVLDHNQPIDPRRTVFVGGLP----RPLTAEELAMIMEDLFGGVLYVGIDTD 406 (520)
T ss_pred EeeEeccchhhhccCcccCccceEEecCCC----CcchHHHHHHHHHHhcCceEEEEeccC
Confidence 34677889999998899765 799999985 3444 5788888865458999987665
No 288
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=23.26 E-value=1.6e+02 Score=28.37 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=52.2
Q ss_pred CcEEEe-cccCcc---cccccCceeEEEe----cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCC
Q psy11555 304 DKILLK-SWAPQR---DILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 375 (484)
Q Consensus 304 ~nv~~~-~~~pq~---~ll~h~~~~~~It----hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 375 (484)
+++.+. +++|.. ++| .+||+.|- .=|.|++.-.++.|+|+++-.. -+.+ +.+.+.|+-+..+.+++
T Consensus 206 ~~~~~L~e~l~f~eYl~lL--~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~---n~fw-qdl~e~gv~Vlf~~d~L 279 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALL--RQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRD---NPFW-QDLTEQGLPVLFTGDDL 279 (322)
T ss_pred ccEEehhhhCCHHHHHHHH--HhCCEEEEeechhhHHhHHHHHHHCCCcEEEecC---CchH-HHHHhCCCeEEecCCcc
Confidence 566654 566644 566 56666653 3478999999999999998422 1112 34667788887788888
Q ss_pred CHHHHHHHHHH
Q psy11555 376 TEETVLVALRT 386 (484)
Q Consensus 376 ~~~~l~~ai~~ 386 (484)
+...+.++=++
T Consensus 280 ~~~~v~e~~rq 290 (322)
T PRK02797 280 DEDIVREAQRQ 290 (322)
T ss_pred cHHHHHHHHHH
Confidence 88777766443
No 289
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=22.90 E-value=7.2e+02 Score=25.22 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=32.5
Q ss_pred CHHHHHHhhcCCCccEEEEccc---chhhHHHHHHH---hCCCEEEEeCCCC
Q psy11555 85 TKAALDLLHSSKKYDLIITEVF---NTDCFLGFVYK---FKVPYIAVSAAHI 130 (484)
Q Consensus 85 ~~~l~~~l~~~~~~DlvI~d~~---~~~~~~~~A~~---l~iP~i~~~~~~~ 130 (484)
-+++.+.|+ +.+.|.||.-+. +.-|+..+++. .|||.|.+.+...
T Consensus 325 g~eIa~~Lk-~dgVDAVILTstCgtC~r~~a~m~keiE~~GiPvv~~~~~~p 375 (431)
T TIGR01918 325 AKEFVVELK-QGGVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHMCTVIP 375 (431)
T ss_pred HHHHHHHHH-HcCCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeeccc
Confidence 356777887 889999998755 34566666655 4999998877543
No 290
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=22.75 E-value=3e+02 Score=23.80 Aligned_cols=47 Identities=15% Similarity=0.208 Sum_probs=35.0
Q ss_pred HhcCCceeeccCCCc--hHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH
Q psy11555 339 LYSGVPIIGIPMFGD--QKANIRVVEKAGFGVTLPYDQITEETVLVALR 385 (484)
Q Consensus 339 l~~gvP~i~~P~~~d--Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~ 385 (484)
-..|++++++....+ +..-.+.+.+.+-|......+.+...+..+++
T Consensus 129 ~~~gi~v~~I~~~~~~~~~~~l~~iA~~tgG~~~~~~d~~~~~~~~~~~ 177 (178)
T cd01451 129 RARGISALVIDTEGRPVRRGLAKDLARALGGQYVRLPDLSADAIASAVR 177 (178)
T ss_pred HhcCCcEEEEeCCCCccCccHHHHHHHHcCCeEEEcCcCCHHHHHHHhh
Confidence 356788888776543 34456778888889888888888888887765
No 291
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=22.60 E-value=1.2e+02 Score=30.76 Aligned_cols=32 Identities=13% Similarity=0.191 Sum_probs=24.5
Q ss_pred HHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 90 DLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 90 ~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
+.++ ..++|++|..+ .+..+|+++|||++.+.
T Consensus 344 ~~~~-~~~pDl~Ig~s----~~~~~a~~~giP~~r~~ 375 (416)
T cd01980 344 AAVE-EYRPDLAIGTT----PLVQYAKEKGIPALYYT 375 (416)
T ss_pred HHHh-hcCCCEEEeCC----hhhHHHHHhCCCEEEec
Confidence 4454 67999999972 35668999999998754
No 292
>PF11346 DUF3149: Protein of unknown function (DUF3149); InterPro: IPR021494 This bacterial family of proteins has no known function.
Probab=22.51 E-value=2.3e+02 Score=18.34 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q psy11555 442 QYILLDVIIALILLIAAMVWSIQWLVRYALITYYN 476 (484)
Q Consensus 442 ~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (484)
+...=||-+.-+++++.++.+..+..++..++..+
T Consensus 5 ~LF~s~vGL~Sl~vI~~~igm~~~~~~~F~~k~~~ 39 (42)
T PF11346_consen 5 DLFGSDVGLMSLIVIVFTIGMGVFFIRYFIRKMKE 39 (42)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33444554444455555555555556666555443
No 293
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=22.50 E-value=1.7e+02 Score=23.99 Aligned_cols=28 Identities=18% Similarity=0.263 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q psy11555 449 IIALILLIAAMVWSIQWLVRYALITYYNT 477 (484)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (484)
.++++.+++.++.++ .++-++++|+.++
T Consensus 67 ~~Ii~gv~aGvIg~I-lli~y~irR~~Kk 94 (122)
T PF01102_consen 67 IGIIFGVMAGVIGII-LLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHS--
T ss_pred eehhHHHHHHHHHHH-HHHHHHHHHHhcc
Confidence 344444444444433 3455555555443
No 294
>PRK04330 hypothetical protein; Provisional
Probab=22.41 E-value=2.6e+02 Score=21.32 Aligned_cols=54 Identities=9% Similarity=0.140 Sum_probs=34.3
Q ss_pred HHHHHHHHhCCH----HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCccc
Q psy11555 380 VLVALRTVLGNP----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRP 433 (484)
Q Consensus 380 l~~ai~~~l~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~l~~ 433 (484)
....+.++.+|. ..|+.|.+..+.+.+...++.-+|+..|-.+-+-...+.+-.
T Consensus 14 ~~~~L~~I~~D~sVPRNIRraa~ea~~~L~~e~~~~~vRaA~AIs~LdeIs~DPNmP~ 71 (88)
T PRK04330 14 AIQMLEEIINDTSVPRNIRRAATEAKEILLNEEESPGVRAATAISILDEISNDPNMPL 71 (88)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHhhcCCCCCh
Confidence 334445666664 488888888888888766777777766655544434444433
No 295
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=22.38 E-value=1.1e+02 Score=27.17 Aligned_cols=30 Identities=10% Similarity=0.023 Sum_probs=20.0
Q ss_pred hhhhcCCeEEEEeecCCC----CCCCCceEEeec
Q psy11555 2 GLTDHGHVVDILSHFPQS----SKIPNYNDISVE 31 (484)
Q Consensus 2 ~L~~rGH~Vtvvt~~~~~----~~~~~~~~i~~~ 31 (484)
.|+++||+|||.+..+.. ..-.+.+.+.++
T Consensus 29 ~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~ 62 (185)
T PF09314_consen 29 RLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIP 62 (185)
T ss_pred HHhcCCceEEEEEccCCCCCCCcccCCeEEEEeC
Confidence 478899999999885322 122455666665
No 296
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=22.27 E-value=7.2e+02 Score=24.07 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=13.8
Q ss_pred hhhhcCCeEEEEeecC
Q psy11555 2 GLTDHGHVVDILSHFP 17 (484)
Q Consensus 2 ~L~~rGH~Vtvvt~~~ 17 (484)
+|.+.||+|+|+-...
T Consensus 19 ~Ll~~G~~vvV~DNL~ 34 (329)
T COG1087 19 QLLKTGHEVVVLDNLS 34 (329)
T ss_pred HHHHCCCeEEEEecCC
Confidence 6899999999998864
No 297
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=22.08 E-value=2.1e+02 Score=24.88 Aligned_cols=55 Identities=22% Similarity=0.271 Sum_probs=40.8
Q ss_pred hHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEE-ecCCCCCHHHHHHHHHHHhCC
Q psy11555 334 GTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 334 s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~~l~~ 390 (484)
.+-|.+.+++|+|..=.--+..-..+++.+.|--.+ ++++ +.+.|...|..+|.+
T Consensus 122 ~ve~vl~~~kpliatlHrrsr~P~v~~ik~~~~v~v~lt~~--NR~~i~~~Il~~L~~ 177 (179)
T COG1618 122 AVEEVLKSGKPLIATLHRRSRHPLVQRIKKLGGVYVFLTPE--NRNRILNEILSVLKG 177 (179)
T ss_pred HHHHHhcCCCcEEEEEecccCChHHHHhhhcCCEEEEEccc--hhhHHHHHHHHHhcc
Confidence 578889999998876544555567778888887777 7766 666788877777754
No 298
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=22.01 E-value=1.7e+02 Score=26.88 Aligned_cols=36 Identities=28% Similarity=0.349 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 86 KAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
.++.++++ +.|++|+.-+ -+..+|-.+|+|+|.+..
T Consensus 249 ~~~~~~~~---~~~~~Is~Rl---H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 249 DELLELIS---QADLVISMRL---HGAILALSLGVPVIAISY 284 (286)
T ss_pred HHHHHHHh---cCCEEEecCC---HHHHHHHHcCCCEEEEec
Confidence 34556665 8999999966 255579999999998764
No 299
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=21.92 E-value=1.6e+02 Score=27.67 Aligned_cols=39 Identities=10% Similarity=-0.024 Sum_probs=28.5
Q ss_pred HHHHhhcCCCccEEEEccc-----chhhHHHHHHHhCCCEEEEeC
Q psy11555 88 ALDLLHSSKKYDLIITEVF-----NTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~-----~~~~~~~~A~~l~iP~i~~~~ 127 (484)
+.+.++ ..++|+|++... ...-+..+|+.+|.|++...+
T Consensus 103 Laa~~~-~~~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~ 146 (260)
T COG2086 103 LAAAVK-KIGPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVS 146 (260)
T ss_pred HHHHHH-hcCCCEEEEecccccCCccchHHHHHHHhCCceeeeEE
Confidence 455565 789999998632 245677899999999886443
No 300
>PRK03202 6-phosphofructokinase; Provisional
Probab=21.75 E-value=7.5e+02 Score=24.05 Aligned_cols=103 Identities=16% Similarity=0.203 Sum_probs=58.2
Q ss_pred ccCceeEEEe---cCCcchHHHHHhcCCceeeccCC-CchHHHHH----HHHH-cCcEEEecCCCC-CHHHHHHHHHHHh
Q psy11555 319 DHPNVKVFIS---HGGFLGTTEALYSGVPIIGIPMF-GDQKANIR----VVEK-AGFGVTLPYDQI-TEETVLVALRTVL 388 (484)
Q Consensus 319 ~h~~~~~~It---hgG~~s~~Eal~~gvP~i~~P~~-~dQ~~na~----~~~~-~G~g~~l~~~~~-~~~~l~~ai~~~l 388 (484)
.|+++-++=+ |+|+-++.-+++.|.-++.+|-. .+...-+. +.++ .+.++++-.+.+ ..+.|++.+++-+
T Consensus 159 s~~rv~iVEvMGR~~G~LAl~~ala~~a~~iliPE~~~~~~~l~~~i~~r~~~g~~~~vivvsEg~~~~~~l~~~i~~~~ 238 (320)
T PRK03202 159 SHERVFIVEVMGRHAGDLALHAGIAGGAEVILIPEVPFDIEELCAKIKKGRERGKKHAIIVVAEGVMPAEELAKEIEERT 238 (320)
T ss_pred ccCCEEEEEECCCChHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCCHHHHHHHHHHHh
Confidence 3665544444 77888899999999999999964 23322222 3333 567776544433 4566777776655
Q ss_pred CCHHHHHHHHHHHHHHhCCCCChHHH------HHHHHHHHHH
Q psy11555 389 GNPSYKKRAEKVARLFQDRPMPPLDT------AIYWIEHVIR 424 (484)
Q Consensus 389 ~~~~~~~~a~~~~~~~~~~~~~~~~~------~~~~ie~~~~ 424 (484)
. ++.+...++-..|..+-++.|+ +..-+|.+.+
T Consensus 239 ~---~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~ 277 (320)
T PRK03202 239 G---LETRVTVLGHIQRGGSPTAFDRVLASRMGAHAVELLLE 277 (320)
T ss_pred C---CceEEcccchhhcCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 3 2334444444444433344443 4455565554
No 301
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=21.73 E-value=1.1e+02 Score=26.72 Aligned_cols=36 Identities=14% Similarity=-0.049 Sum_probs=26.0
Q ss_pred CCCccEEEEcccch-hhHHHHHHHh------CCCEEEEeCCCC
Q psy11555 95 SKKYDLIITEVFNT-DCFLGFVYKF------KVPYIAVSAAHI 130 (484)
Q Consensus 95 ~~~~DlvI~d~~~~-~~~~~~A~~l------~iP~i~~~~~~~ 130 (484)
..+||+||+..... .....+|..+ |.+.|++-+..-
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~aR 132 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFAR 132 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeeee
Confidence 57899999986521 2223367888 999999988653
No 302
>cd02958 UAS UAS family; UAS is a domain of unknown function. Most members of this family are uncharacterized proteins with similarity to FAS-associated factor 1 (FAF1) and ETEA because of the presence of a UAS domain N-terminal to a ubiquitin-associated UBX domain. FAF1 is a longer protein, compared to the other members of this family, having additional N-terminal domains, a ubiquitin-associated UBA domain and a nuclear targeting domain. FAF1 is an apoptotic signaling molecule that acts downstream in the Fas signal transduction pathway. It interacts with the cytoplasmic domain of Fas, but not to a Fas mutant that is deficient in signal transduction. ETEA is the protein product of a highly expressed gene in T-cells and eosinophils of atopic dermatitis patients. The presence of the ubiquitin-associated UBX domain in the proteins of this family suggests the possibility of their involvement in ubiquitination. Recently, FAF1 has been shown to interact with valosin-containing protein (VCP),
Probab=21.71 E-value=2.4e+02 Score=22.19 Aligned_cols=50 Identities=12% Similarity=0.200 Sum_probs=35.7
Q ss_pred HHHHHHHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhC---CCEEEEe
Q psy11555 74 SGEDTCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFK---VPYIAVS 126 (484)
Q Consensus 74 ~~~~~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~---iP~i~~~ 126 (484)
.-...|+.++.++++.+.++ .+|-.+..|.. .+-+..+++.++ .|.+.+.
T Consensus 31 ~c~~~~~~vl~~~~v~~~l~--~~~v~~~~d~~-~~e~~~~~~~~~~~~~P~~~~i 83 (114)
T cd02958 31 DSQVLNRDLWSNESVKEFIR--ENFIFWQCDID-SSEGQRFLQSYKVDKYPHIAII 83 (114)
T ss_pred hHHHHHHHHcCCHHHHHHHH--hCEEEEEecCC-CccHHHHHHHhCccCCCeEEEE
Confidence 33567888999999999996 36777777765 344566788774 5876544
No 303
>PF07219 HemY_N: HemY protein N-terminus; InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=21.60 E-value=1.6e+02 Score=23.26 Aligned_cols=23 Identities=26% Similarity=0.481 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 449 IIALILLIAAMVWSIQWLVRYAL 471 (484)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
.+++++++++++++++++++.++
T Consensus 19 ~~~~l~~~~~~l~ll~~ll~~~~ 41 (108)
T PF07219_consen 19 ALILLLLLFVVLYLLLRLLRRLL 41 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666667777777653
No 304
>PRK06270 homoserine dehydrogenase; Provisional
Probab=21.53 E-value=1.3e+02 Score=29.64 Aligned_cols=57 Identities=16% Similarity=0.223 Sum_probs=37.3
Q ss_pred ccccccCceeEEEe------cCC---cchHHHHHhcCCceee---ccCCCchHHHHHHHHHcCcEEEec
Q psy11555 315 RDILDHPNVKVFIS------HGG---FLGTTEALYSGVPIIG---IPMFGDQKANIRVVEKAGFGVTLP 371 (484)
Q Consensus 315 ~~ll~h~~~~~~It------hgG---~~s~~Eal~~gvP~i~---~P~~~dQ~~na~~~~~~G~g~~l~ 371 (484)
.+++.++.++++|- |+| ..-+.+|+.+|+++|+ -|....-..-.+..++.|..+..+
T Consensus 82 ~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~g~~~~~e 150 (341)
T PRK06270 82 LEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKNGVRFRYE 150 (341)
T ss_pred HHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHcCCEEEEe
Confidence 45666677777775 443 3346899999999999 476443333445566677776653
No 305
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=21.53 E-value=79 Score=26.18 Aligned_cols=34 Identities=32% Similarity=0.583 Sum_probs=27.8
Q ss_pred cccccCceeEEEecCCcchHHHHHhcCCceeeccC
Q psy11555 316 DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPM 350 (484)
Q Consensus 316 ~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~ 350 (484)
.++.||++.++||-|..-+ .-++.+|.|.|++|=
T Consensus 4 ~v~~~p~~pi~ItEG~kKA-~al~s~G~~aIalpG 37 (130)
T PF12965_consen 4 WVLDDPNIPIWITEGAKKA-GALLSQGYPAIALPG 37 (130)
T ss_pred ceecCCCccEEEEechHHH-HHHHcCCceEEEeCc
Confidence 4567899999999998755 455779999999994
No 306
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=21.34 E-value=1.7e+02 Score=25.55 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=25.7
Q ss_pred CHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeC
Q psy11555 85 TKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 85 ~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~ 127 (484)
++.+.+++ +.+||+||...........--+..|+|++.+..
T Consensus 50 ~~n~E~l~--~l~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~ 90 (195)
T cd01143 50 NPNVEKIV--ALKPDLVIVSSSSLAELLEKLKDAGIPVVVLPA 90 (195)
T ss_pred CCCHHHHh--ccCCCEEEEcCCcCHHHHHHHHHcCCcEEEeCC
Confidence 44566665 579999998654322233344567899877653
No 307
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=21.25 E-value=7.2e+02 Score=24.50 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=35.6
Q ss_pred CceeeccCC-CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHH
Q psy11555 343 VPIIGIPMF-GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 387 (484)
Q Consensus 343 vP~i~~P~~-~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~ 387 (484)
.|+.+-++. ..-..-++...+.|+-+++...+++.++|.+.++++
T Consensus 114 l~ih~S~q~~v~N~~~~~f~~~~G~~rvVl~rEls~~ei~~i~~~~ 159 (347)
T COG0826 114 LPIHVSTQANVTNAETAKFWKELGAKRVVLPRELSLEEIKEIKEQT 159 (347)
T ss_pred CcEEEeeeEecCCHHHHHHHHHcCCEEEEeCccCCHHHHHHHHHhC
Confidence 666666653 355566788889998888999999999999988886
No 308
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.18 E-value=4.1e+02 Score=22.95 Aligned_cols=70 Identities=24% Similarity=0.377 Sum_probs=45.9
Q ss_pred hHHHHHhcCCceeeccC-C-CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHH
Q psy11555 334 GTTEALYSGVPIIGIPM-F-GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP---SYKKRAEKVARLF 404 (484)
Q Consensus 334 s~~Eal~~gvP~i~~P~-~-~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~---~~~~~a~~~~~~~ 404 (484)
|..|-..+|.=-+. |. + -=+..|+.+.++.|.=.++--+..+.++|.++..+=|+|. ++++.+.++.+..
T Consensus 89 S~~EQasAGLd~Ls-~~E~a~f~~LN~aY~~rFgfPfI~aVkg~~k~~Il~a~~~Rl~n~~e~E~~tAl~eI~rIA 163 (176)
T COG3195 89 STSEQASAGLDRLS-PEEFARFTELNAAYVERFGFPFIIAVKGNTKDTILAAFERRLDNDREQEFATALAEIERIA 163 (176)
T ss_pred hHHHHHhcCcccCC-HHHHHHHHHHHHHHHHhcCCceEEeecCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 45555555544332 10 0 0134699999999998887667778999999998888774 3566555555443
No 309
>COG5547 Small integral membrane protein [Function unknown]
Probab=20.89 E-value=2.8e+02 Score=19.23 Aligned_cols=17 Identities=12% Similarity=0.128 Sum_probs=9.9
Q ss_pred CcHHHHHHHHHHHHHHH
Q psy11555 438 LYWWQYILLDVIIALIL 454 (484)
Q Consensus 438 ~~~~~~~~lDv~~~~~~ 454 (484)
|.|++.+-.-++..++.
T Consensus 1 meflk~fkypIIgglvg 17 (62)
T COG5547 1 MEFLKKFKYPIIGGLVG 17 (62)
T ss_pred CcHHHHhccchHHHHHH
Confidence 45666666666655443
No 310
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=20.73 E-value=1.3e+02 Score=25.79 Aligned_cols=26 Identities=23% Similarity=0.382 Sum_probs=19.4
Q ss_pred eEEEecCC------cchHHHHHhcCCceeecc
Q psy11555 324 KVFISHGG------FLGTTEALYSGVPIIGIP 349 (484)
Q Consensus 324 ~~~IthgG------~~s~~Eal~~gvP~i~~P 349 (484)
.++++++| .+.+.||...++|+|++.
T Consensus 61 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 92 (162)
T cd07038 61 GALVTTYGVGELSALNGIAGAYAEHVPVVHIV 92 (162)
T ss_pred EEEEEcCCccHHHHHHHHHHHHHcCCCEEEEe
Confidence 34555555 345899999999999985
No 311
>PRK14476 nitrogenase molybdenum-cofactor biosynthesis protein NifN; Provisional
Probab=20.66 E-value=1.6e+02 Score=30.38 Aligned_cols=26 Identities=23% Similarity=0.277 Sum_probs=20.9
Q ss_pred CccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 97 KYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 97 ~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++|++|.++. ...+|+++|+|++.+.
T Consensus 371 ~~dliig~s~----~~~~a~~~gip~~~~g 396 (455)
T PRK14476 371 GADLLITNSH----GRQAAERLGIPLLRVG 396 (455)
T ss_pred CCCEEEECch----hHHHHHHcCCCEEEec
Confidence 7999999854 4568999999997654
No 312
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=20.61 E-value=2.2e+02 Score=23.84 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=21.3
Q ss_pred ceeEEEecCCc------chHHHHHhcCCceeecc
Q psy11555 322 NVKVFISHGGF------LGTTEALYSGVPIIGIP 349 (484)
Q Consensus 322 ~~~~~IthgG~------~s~~Eal~~gvP~i~~P 349 (484)
+..++++|+|- +.+.+|...++|+|++.
T Consensus 59 ~~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~ 92 (155)
T cd07035 59 KPGVVLVTSGPGLTNAVTGLANAYLDSIPLLVIT 92 (155)
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 34577777653 46889999999999985
No 313
>PLN02293 adenine phosphoribosyltransferase
Probab=20.52 E-value=2.3e+02 Score=25.11 Aligned_cols=33 Identities=0% Similarity=-0.116 Sum_probs=23.7
Q ss_pred CCCccEEEEccc-chhhHHHHHHHhCCCEEEEeC
Q psy11555 95 SKKYDLIITEVF-NTDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 95 ~~~~DlvI~d~~-~~~~~~~~A~~l~iP~i~~~~ 127 (484)
..++|+|++-.. .-+.+..+|..+|+|++.+--
T Consensus 60 ~~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK 93 (187)
T PLN02293 60 DMGISVVAGIEARGFIFGPPIALAIGAKFVPLRK 93 (187)
T ss_pred hcCCCEEEEeCCCchHHHHHHHHHHCCCEEEEEe
Confidence 557899887542 225677799999999876543
No 314
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=20.47 E-value=1.9e+02 Score=21.75 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=25.5
Q ss_pred HHHHHHhhcCCCccEEEEcccc--------hhhHHHHHHHhCCCEE
Q psy11555 86 KAALDLLHSSKKYDLIITEVFN--------TDCFLGFVYKFKVPYI 123 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d~~~--------~~~~~~~A~~l~iP~i 123 (484)
+.+.++++ +.++|+||.-..- .......|...+||++
T Consensus 45 ~~i~~~i~-~g~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 45 LAILDLIK-NGEIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHHhc-CCCeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 34778887 8899999985421 1233447888899975
No 315
>TIGR01282 nifD nitrogenase molybdenum-iron protein alpha chain. Nitrogenase consists of alpha (NifD) and beta (NifK) subunits of the molybdenum-iron protein and an ATP-binding iron-sulfur protein (NifH). This model describes a large clade of NifD proteins, but excludes a lineage that contains putative NifD and NifD homologs from species with vanadium-dependent nitrogenases.
Probab=20.42 E-value=51 Score=34.00 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=25.8
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEE
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~ 125 (484)
++.++++ ..++|++|.... +..+|+++|||++.+
T Consensus 395 el~~~i~-~~~pDl~ig~~~----~~~~a~k~gIP~~~~ 428 (466)
T TIGR01282 395 EFEEFVE-KLKPDLVGSGIK----EKYVFQKMGVPFRQM 428 (466)
T ss_pred HHHHHHH-HhCCCEEEecCC----ccceeeecCCCcccc
Confidence 5667776 779999999854 355799999998544
No 316
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=20.36 E-value=1.4e+02 Score=20.15 Aligned_cols=18 Identities=11% Similarity=-0.156 Sum_probs=9.3
Q ss_pred HHHHHHHHHHhhcccccc
Q psy11555 463 IQWLVRYALITYYNTVDD 480 (484)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~ 480 (484)
...++....++-|+.+..
T Consensus 17 g~~I~~~~K~ygYkht~d 34 (50)
T PF12606_consen 17 GLSICTTLKAYGYKHTVD 34 (50)
T ss_pred HHHHHHHhhccccccccC
Confidence 334555556665555443
No 317
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=20.16 E-value=2.3e+02 Score=25.21 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=25.0
Q ss_pred CCCccEEEEccc-chhhHHHHHHHhCCCEEEEeCC
Q psy11555 95 SKKYDLIITEVF-NTDCFLGFVYKFKVPYIAVSAA 128 (484)
Q Consensus 95 ~~~~DlvI~d~~-~~~~~~~~A~~l~iP~i~~~~~ 128 (484)
..++|.|++-.. .-+.+..+|..+|+|++...-.
T Consensus 48 ~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~ 82 (191)
T TIGR01744 48 DDGITKIVTIEASGIAPAIMTGLKLGVPVVFARKK 82 (191)
T ss_pred cCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeC
Confidence 568999986432 2367777899999999887643
Done!