Query psy11555
Match_columns 484
No_of_seqs 274 out of 2737
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 21:30:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11555.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11555hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6.2E-45 2.1E-49 374.2 13.2 301 96-406 117-458 (482)
2 2vch_A Hydroquinone glucosyltr 100.0 1.4E-42 4.8E-47 355.7 29.4 371 1-434 28-477 (480)
3 1iir_A Glycosyltransferase GTF 100.0 5.8E-42 2E-46 346.5 31.1 377 1-432 22-408 (415)
4 1rrv_A Glycosyltransferase GTF 100.0 3.8E-41 1.3E-45 340.6 26.8 310 95-432 92-409 (416)
5 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.7E-41 1.3E-45 339.8 23.6 354 1-407 35-434 (454)
6 2c1x_A UDP-glucose flavonoid 3 100.0 2.5E-39 8.6E-44 329.4 25.4 301 96-422 111-450 (456)
7 2acv_A Triterpene UDP-glucosyl 100.0 9.1E-39 3.1E-43 326.1 22.5 291 85-406 100-442 (463)
8 3h4t_A Glycosyltransferase GTF 100.0 3.3E-37 1.1E-41 310.3 30.5 356 1-426 22-384 (404)
9 2iya_A OLEI, oleandomycin glyc 100.0 1.6E-36 5.5E-41 307.5 31.0 378 1-427 34-424 (424)
10 4amg_A Snogd; transferase, pol 100.0 1.1E-35 3.7E-40 298.9 17.0 168 247-423 228-399 (400)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 1.3E-32 4.5E-37 277.8 29.9 360 1-424 42-413 (415)
12 2p6p_A Glycosyl transferase; X 100.0 1.5E-33 5.2E-38 281.7 22.4 276 87-425 98-380 (384)
13 2yjn_A ERYCIII, glycosyltransf 100.0 4.2E-33 1.4E-37 283.7 20.6 297 88-426 136-437 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 7E-32 2.4E-36 273.8 27.1 362 1-425 29-400 (430)
15 3ia7_A CALG4; glycosysltransfe 100.0 2.7E-31 9.3E-36 266.8 30.2 296 86-425 92-399 (402)
16 4fzr_A SSFS6; structural genom 100.0 3.1E-29 1.1E-33 251.7 23.2 274 87-421 114-397 (398)
17 2o6l_A UDP-glucuronosyltransfe 100.0 2.6E-29 8.8E-34 221.5 17.8 166 239-406 4-170 (170)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1E-28 3.5E-33 247.2 24.5 276 87-424 105-388 (391)
19 3oti_A CALG3; calicheamicin, T 100.0 2.9E-28 9.9E-33 244.7 21.7 345 1-424 42-397 (398)
20 3otg_A CALG1; calicheamicin, T 100.0 6.6E-27 2.2E-31 235.7 22.8 282 87-425 121-409 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.9 4.3E-22 1.5E-26 197.0 25.0 161 255-424 180-356 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 3.3E-17 1.1E-21 161.7 21.1 160 255-425 183-356 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 3.8E-15 1.3E-19 134.6 7.1 123 254-387 27-196 (224)
24 3c48_A Predicted glycosyltrans 99.3 1.6E-09 5.3E-14 109.3 26.8 170 246-428 233-431 (438)
25 3okp_A GDP-mannose-dependent a 99.2 2.2E-10 7.5E-15 113.6 17.5 166 247-425 189-378 (394)
26 2r60_A Glycosyl transferase, g 99.2 2.1E-09 7E-14 110.5 24.7 160 255-425 261-462 (499)
27 3fro_A GLGA glycogen synthase; 99.2 4.6E-10 1.6E-14 112.9 18.1 164 247-424 243-428 (439)
28 2iw1_A Lipopolysaccharide core 99.2 5.7E-09 1.9E-13 102.6 24.3 161 246-420 186-369 (374)
29 2jjm_A Glycosyl transferase, g 99.1 1.5E-09 5E-14 107.9 18.8 165 246-424 201-383 (394)
30 2gek_A Phosphatidylinositol ma 99.1 7.4E-09 2.5E-13 103.0 20.3 147 256-416 208-374 (406)
31 3hbm_A UDP-sugar hydrolase; PS 99.1 3.4E-10 1.2E-14 106.4 9.5 109 255-372 157-274 (282)
32 3ot5_A UDP-N-acetylglucosamine 99.0 3.2E-09 1.1E-13 105.8 14.8 156 254-425 223-394 (403)
33 2iuy_A Avigt4, glycosyltransfe 99.0 3.8E-10 1.3E-14 109.9 7.8 126 258-401 164-315 (342)
34 3s28_A Sucrose synthase 1; gly 99.0 1E-08 3.6E-13 109.9 19.3 158 255-424 571-767 (816)
35 2x6q_A Trehalose-synthase TRET 98.9 1.3E-08 4.6E-13 101.7 16.4 135 254-403 229-392 (416)
36 3dzc_A UDP-N-acetylglucosamine 98.9 7.9E-10 2.7E-14 110.0 7.3 150 255-420 230-395 (396)
37 4hwg_A UDP-N-acetylglucosamine 98.9 4.9E-09 1.7E-13 103.6 9.3 164 246-423 194-374 (385)
38 1rzu_A Glycogen synthase 1; gl 98.8 2.2E-08 7.5E-13 102.3 12.8 151 256-424 291-473 (485)
39 2f9f_A First mannosyl transfer 98.8 9.5E-09 3.2E-13 90.0 7.6 133 256-402 23-175 (177)
40 3oy2_A Glycosyltransferase B73 98.7 3.6E-07 1.2E-11 91.1 18.2 151 255-417 183-382 (413)
41 1vgv_A UDP-N-acetylglucosamine 98.7 2.2E-08 7.5E-13 98.9 8.2 160 255-430 205-380 (384)
42 1v4v_A UDP-N-acetylglucosamine 98.6 6.8E-08 2.3E-12 95.1 9.2 155 255-426 198-368 (376)
43 2hy7_A Glucuronosyltransferase 98.5 2.3E-05 7.7E-10 78.0 22.1 116 257-392 223-354 (406)
44 3beo_A UDP-N-acetylglucosamine 98.3 1E-06 3.4E-11 86.5 8.2 153 255-423 205-373 (375)
45 2bfw_A GLGA glycogen synthase; 98.2 3.7E-06 1.3E-10 74.6 8.7 134 256-403 36-194 (200)
46 3qhp_A Type 1 capsular polysac 98.1 4.1E-06 1.4E-10 71.9 6.8 135 256-403 2-153 (166)
47 2vsy_A XCC0866; transferase, g 98.0 7.1E-05 2.4E-09 77.8 14.8 168 250-424 371-557 (568)
48 4gyw_A UDP-N-acetylglucosamine 98.0 6.2E-05 2.1E-09 80.3 14.4 173 246-424 513-703 (723)
49 2qzs_A Glycogen synthase; glyc 97.9 6.6E-05 2.2E-09 76.3 11.4 151 255-423 291-473 (485)
50 2xci_A KDO-transferase, 3-deox 97.8 2.9E-05 1E-09 76.3 8.1 94 304-404 260-359 (374)
51 3rhz_A GTF3, nucleotide sugar 97.7 0.00015 5.1E-09 70.0 10.3 132 256-407 178-323 (339)
52 3q3e_A HMW1C-like glycosyltran 97.7 0.00022 7.7E-09 73.2 11.4 140 256-401 441-599 (631)
53 2x0d_A WSAF; GT4 family, trans 97.5 8.7E-05 3E-09 73.9 5.5 88 302-396 293-385 (413)
54 3vue_A GBSS-I, granule-bound s 96.5 0.0059 2E-07 62.7 8.3 155 255-425 326-510 (536)
55 1uqt_A Alpha, alpha-trehalose- 94.6 0.28 9.6E-06 49.4 12.3 90 306-406 333-437 (482)
56 3t5t_A Putative glycosyltransf 92.6 0.91 3.1E-05 45.5 11.9 94 305-406 353-456 (496)
57 3nb0_A Glycogen [starch] synth 92.5 0.36 1.2E-05 50.1 8.9 92 309-406 498-615 (725)
58 2iz6_A Molybdenum cofactor car 80.9 20 0.00069 30.2 11.4 128 245-388 36-172 (176)
59 2qzs_A Glycogen synthase; glyc 75.0 3.8 0.00013 40.7 6.0 34 96-129 128-163 (485)
60 3tov_A Glycosyl transferase fa 71.7 3.8 0.00013 39.0 4.8 131 255-389 185-346 (349)
61 2gt1_A Lipopolysaccharide hept 71.6 2.7 9.2E-05 39.5 3.7 126 255-390 178-322 (326)
62 1psw_A ADP-heptose LPS heptosy 70.2 6.8 0.00023 36.9 6.3 92 254-348 179-286 (348)
63 1rcu_A Conserved hypothetical 63.1 31 0.0011 29.6 8.3 95 245-350 49-150 (195)
64 1yt5_A Inorganic polyphosphate 57.5 3.8 0.00013 37.2 1.7 54 321-390 40-96 (258)
65 2i2c_A Probable inorganic poly 55.5 5.1 0.00018 36.6 2.2 54 321-390 34-93 (272)
66 2hac_A T-cell surface glycopro 53.6 16 0.00056 21.1 3.2 19 444-462 6-24 (33)
67 1ydh_A AT5G11950; structural g 49.1 80 0.0027 27.5 8.8 129 245-386 32-186 (216)
68 3to5_A CHEY homolog; alpha(5)b 45.9 1E+02 0.0034 24.3 8.3 102 271-389 20-132 (134)
69 1t35_A Hypothetical protein YV 45.1 1.4E+02 0.0048 25.2 10.0 111 245-365 24-153 (191)
70 2lpm_A Two-component response 45.0 9.3 0.00032 30.1 1.9 40 88-128 45-88 (123)
71 2x0d_A WSAF; GT4 family, trans 44.2 8.2 0.00028 37.6 1.7 17 1-17 73-89 (413)
72 1v4v_A UDP-N-acetylglucosamine 44.1 21 0.00071 33.7 4.6 38 87-125 82-121 (376)
73 2rjn_A Response regulator rece 43.1 48 0.0016 26.2 6.2 49 341-392 78-128 (154)
74 2xdq_B Light-independent proto 42.8 18 0.00061 36.4 4.0 35 87-126 363-397 (511)
75 1qkk_A DCTD, C4-dicarboxylate 42.0 1.2E+02 0.0042 23.7 12.5 53 341-395 74-126 (155)
76 3qua_A Putative uncharacterize 40.3 56 0.0019 28.0 6.2 95 245-349 44-154 (199)
77 3t6k_A Response regulator rece 40.2 1.2E+02 0.0042 23.1 8.9 48 342-391 78-125 (136)
78 3gl9_A Response regulator; bet 39.7 54 0.0019 24.7 5.7 43 88-131 38-88 (122)
79 3to5_A CHEY homolog; alpha(5)b 39.6 32 0.0011 27.3 4.4 43 89-132 50-100 (134)
80 2jo1_A Phospholemman; FXYD1, N 39.1 51 0.0017 22.8 4.4 33 440-472 10-42 (72)
81 3vue_A GBSS-I, granule-bound s 37.5 11 0.00037 38.2 1.5 16 1-16 37-52 (536)
82 2qxy_A Response regulator; reg 37.0 1.4E+02 0.0047 22.8 9.3 103 272-391 13-122 (142)
83 2jp3_A FXYD domain-containing 36.4 48 0.0016 22.7 4.0 31 440-470 11-41 (67)
84 3kto_A Response regulator rece 36.3 1.4E+02 0.0048 22.7 9.9 104 271-391 14-127 (136)
85 3lua_A Response regulator rece 35.4 1.5E+02 0.005 22.6 10.5 53 340-394 79-131 (140)
86 3oow_A Phosphoribosylaminoimid 35.4 1.9E+02 0.0065 23.9 8.5 138 256-406 6-155 (166)
87 3afo_A NADH kinase POS5; alpha 35.3 12 0.0004 36.1 1.2 54 321-390 113-171 (388)
88 3grc_A Sensor protein, kinase; 35.1 48 0.0017 25.6 4.8 50 341-391 79-128 (140)
89 3l7i_A Teichoic acid biosynthe 34.9 25 0.00086 37.0 3.8 139 276-424 566-719 (729)
90 2an1_A Putative kinase; struct 34.6 18 0.0006 33.3 2.3 94 274-390 21-119 (292)
91 1wek_A Hypothetical protein TT 33.9 56 0.0019 28.5 5.3 94 245-349 60-169 (217)
92 1eiw_A Hypothetical protein MT 33.1 53 0.0018 25.2 4.4 63 321-388 37-108 (111)
93 3sbx_A Putative uncharacterize 33.1 1.3E+02 0.0045 25.4 7.4 95 245-349 35-145 (189)
94 3tl4_X Glutaminyl-tRNA synthet 30.9 19 0.00066 30.6 1.7 45 356-406 103-154 (187)
95 2rdm_A Response regulator rece 30.8 91 0.0031 23.5 5.8 43 88-131 41-91 (132)
96 1fy2_A Aspartyl dipeptidase; s 30.8 79 0.0027 27.7 5.8 86 243-349 21-120 (229)
97 1vgv_A UDP-N-acetylglucosamine 30.7 33 0.0011 32.3 3.7 40 87-127 77-118 (384)
98 3h5i_A Response regulator/sens 30.4 92 0.0031 24.0 5.8 43 88-130 41-89 (140)
99 3rqi_A Response regulator prot 30.4 2.2E+02 0.0075 23.1 8.7 46 341-389 78-124 (184)
100 3gl9_A Response regulator; bet 30.1 1.7E+02 0.0058 21.7 10.4 47 341-389 75-121 (122)
101 3beo_A UDP-N-acetylglucosamine 29.8 43 0.0015 31.3 4.3 38 88-126 87-126 (375)
102 1qo0_D AMIR; binding protein, 29.0 2.4E+02 0.0081 23.1 12.1 100 273-390 22-125 (196)
103 3u7q_B Nitrogenase molybdenum- 29.0 35 0.0012 34.3 3.5 35 87-126 429-470 (523)
104 3l4e_A Uncharacterized peptida 28.2 89 0.003 26.9 5.6 87 245-349 17-120 (206)
105 2qxy_A Response regulator; reg 28.0 1E+02 0.0034 23.7 5.7 43 87-131 39-87 (142)
106 1u0t_A Inorganic polyphosphate 27.8 20 0.00069 33.2 1.4 54 321-390 74-131 (307)
107 2jk1_A HUPR, hydrogenase trans 27.4 1.7E+02 0.0057 22.3 6.9 48 341-390 71-119 (139)
108 3lp6_A Phosphoribosylaminoimid 27.2 2.4E+02 0.0081 23.5 7.6 138 255-406 7-155 (174)
109 1o4v_A Phosphoribosylaminoimid 26.4 2.9E+02 0.0098 23.2 9.5 138 255-406 13-161 (183)
110 2a33_A Hypothetical protein; s 26.2 1.6E+02 0.0053 25.6 6.8 87 256-350 45-147 (215)
111 2lnd_A De novo designed protei 25.9 66 0.0023 22.7 3.4 48 340-388 49-99 (112)
112 3pdi_B Nitrogenase MOFE cofact 25.7 39 0.0013 33.3 3.1 35 87-126 366-400 (458)
113 3ahc_A Phosphoketolase, xylulo 25.7 2.3E+02 0.008 30.1 9.1 84 324-427 725-813 (845)
114 2qx0_A 7,8-dihydro-6-hydroxyme 25.6 1.1E+02 0.0037 25.2 5.3 29 257-288 3-31 (159)
115 3gt7_A Sensor protein; structu 25.5 1.2E+02 0.0042 23.8 5.8 44 87-131 42-93 (154)
116 3c3m_A Response regulator rece 25.3 1.4E+02 0.0048 22.8 6.0 42 88-130 39-88 (138)
117 3kcn_A Adenylate cyclase homol 25.2 1.9E+02 0.0066 22.3 7.0 51 341-394 75-127 (151)
118 3cg0_A Response regulator rece 25.2 76 0.0026 24.3 4.4 44 88-132 46-95 (140)
119 3rg8_A Phosphoribosylaminoimid 25.2 1.6E+02 0.0056 24.1 6.2 136 256-406 3-148 (159)
120 1f9y_A HPPK, protein (6-hydrox 24.5 88 0.003 25.7 4.5 29 257-288 2-30 (158)
121 1xmp_A PURE, phosphoribosylami 24.3 3E+02 0.01 22.7 9.2 139 255-406 11-161 (170)
122 3tqq_A Methionyl-tRNA formyltr 24.1 1E+02 0.0035 28.5 5.6 23 83-106 67-89 (314)
123 4gud_A Imidazole glycerol phos 24.0 65 0.0022 27.5 4.0 65 256-350 4-80 (211)
124 3cu5_A Two component transcrip 23.4 1.1E+02 0.0038 23.6 5.1 41 88-129 41-87 (141)
125 3ip0_A 2-amino-4-hydroxy-6-hyd 22.7 1E+02 0.0034 25.3 4.6 29 257-288 2-30 (158)
126 3dfz_A SIRC, precorrin-2 dehyd 22.6 2.2E+02 0.0074 24.8 7.1 97 321-418 90-197 (223)
127 1u11_A PURE (N5-carboxyaminoim 22.5 3.4E+02 0.012 22.7 7.9 138 255-406 21-171 (182)
128 1cbk_A Protein (7,8-dihydro-6- 22.3 1E+02 0.0035 25.4 4.5 29 257-288 3-31 (160)
129 1efv_B Electron transfer flavo 22.2 75 0.0026 28.5 4.1 38 88-126 108-150 (255)
130 2qzg_A Conserved uncharacteriz 22.2 1.6E+02 0.0056 21.6 5.0 50 384-433 23-76 (94)
131 3a10_A Response regulator; pho 22.2 1.3E+02 0.0045 21.9 5.1 41 88-129 37-83 (116)
132 3ug7_A Arsenical pump-driving 21.7 2E+02 0.0069 26.8 7.2 46 246-296 228-274 (349)
133 1o97_C Electron transferring f 21.6 83 0.0028 28.3 4.3 38 88-126 104-146 (264)
134 2qsb_A UPF0147 protein TA0600; 21.5 1.5E+02 0.0051 21.6 4.6 50 382-431 17-70 (89)
135 3snk_A Response regulator CHEY 21.4 2.6E+02 0.009 20.9 12.0 102 271-389 22-132 (135)
136 3u7q_A Nitrogenase molybdenum- 21.4 58 0.002 32.4 3.4 33 87-124 408-440 (492)
137 2q5c_A NTRC family transcripti 21.3 80 0.0028 26.9 3.9 30 95-128 140-169 (196)
138 3q0i_A Methionyl-tRNA formyltr 21.2 1.3E+02 0.0045 27.8 5.7 22 84-106 73-94 (318)
139 3qbc_A 2-amino-4-hydroxy-6-hyd 21.1 1.1E+02 0.0036 25.3 4.4 30 256-288 5-34 (161)
140 2gkg_A Response regulator homo 20.9 94 0.0032 23.1 4.0 47 341-390 79-125 (127)
141 3gt7_A Sensor protein; structu 20.6 3E+02 0.01 21.3 10.8 101 272-389 16-126 (154)
142 2w36_A Endonuclease V; hypoxan 20.2 69 0.0024 28.1 3.2 43 88-130 93-142 (225)
143 3trh_A Phosphoribosylaminoimid 20.1 3.7E+02 0.013 22.2 8.8 139 255-406 6-156 (169)
No 1
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=6.2e-45 Score=374.24 Aligned_cols=301 Identities=17% Similarity=0.317 Sum_probs=220.2
Q ss_pred CCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh-hhCCCCCCCccCccccCCCCCCCHHHHHHHHHHHHH--
Q psy11555 96 KKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE-RFGIPDNPSYIPNAFLSYDSDMNFVQRMFNSITTLS-- 172 (484)
Q Consensus 96 ~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~-~~g~p~~~s~~P~~~~~~~~~~sf~~R~~n~~~~~~-- 172 (484)
.+||+||+|.++ .|+..+|+++|||+|.+++++....... .++.+..++++|.....+. .++|++|..|.+....
T Consensus 117 ~~~d~vI~D~~~-~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 194 (482)
T 2pq6_A 117 PPVTCLVSDCCM-SFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYL-TNGCLETKVDWIPGLKNF 194 (482)
T ss_dssp CCCCEEEEETTC-THHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCSSCSSGGGG-TSSGGGCBCCSSTTCCSC
T ss_pred CCceEEEECCcc-hhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCCCCcccccc-ccccccCccccCCCCCCC
Confidence 589999999985 7999999999999999998876543322 1232223445554433222 2244444333211000
Q ss_pred -HHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCCCCceEEEcccccC--CC-----
Q psy11555 173 -INLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPYPNNVIEVAGLHVK--SP----- 239 (484)
Q Consensus 173 -~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~~p~v~~vG~~~~~--~~----- 239 (484)
...+..........+...+.+ ....+..++++++|+||++.||++ ++..|++++|||++.. ..
T Consensus 195 ~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~vl~nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~ 270 (482)
T 2pq6_A 195 RLKDIVDFIRTTNPNDIMLEFF----IEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQ 270 (482)
T ss_dssp BGGGSCGGGCCSCTTCHHHHHH----HHHHHTCCTTCCEEESSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGG
T ss_pred chHHCchhhccCCcccHHHHHH----HHHHHhhccCCEEEEcChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccc
Confidence 000000000000000111111 122345567889999999999987 7766899999999763 21
Q ss_pred -----CCC---ccchHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC-------CCC--
Q psy11555 240 -----QPL---PNDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN-------MSG-- 301 (484)
Q Consensus 240 -----~~l---~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~-------~~~-- 301 (484)
.++ +.++.+|++.. ++++|||||||... .+.+.+..+++++++.+++|+|+++.+. +++
T Consensus 271 ~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~ 347 (482)
T 2pq6_A 271 LDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTV---MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEF 347 (482)
T ss_dssp GCC---------CHHHHHHTTSCTTCEEEEECCSSSC---CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHH
T ss_pred cccccccccccchHHHHHHhcCCCCceEEEecCCccc---CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhH
Confidence 122 34588999986 47999999999843 5667789999999999999999987531 221
Q ss_pred ---CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHH-HcCcEEEecCCCCCH
Q psy11555 302 ---KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVE-KAGFGVTLPYDQITE 377 (484)
Q Consensus 302 ---~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~-~~G~g~~l~~~~~~~ 377 (484)
.++|+++.+|+||.++|+|+++++||||||+||++||+++|||+|++|+++||+.||++++ +.|+|+.++ ++++.
T Consensus 348 ~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~ 426 (482)
T 2pq6_A 348 TNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKR 426 (482)
T ss_dssp HHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCH
T ss_pred HHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCH
Confidence 3579999999999999999999999999999999999999999999999999999999997 799999998 68999
Q ss_pred HHHHHHHHHHhCCH---HHHHHHHHHHHHHhC
Q psy11555 378 ETVLVALRTVLGNP---SYKKRAEKVARLFQD 406 (484)
Q Consensus 378 ~~l~~ai~~~l~~~---~~~~~a~~~~~~~~~ 406 (484)
++|.++|+++|+|+ +||++|+++++.+++
T Consensus 427 ~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~ 458 (482)
T 2pq6_A 427 EELAKLINEVIAGDKGKKMKQKAMELKKKAEE 458 (482)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999998 699999999999976
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.4e-42 Score=355.66 Aligned_cols=371 Identities=16% Similarity=0.177 Sum_probs=248.2
Q ss_pred Chhhhc-CCeEEEEeecCC--CCC--------CCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCccccccc
Q psy11555 1 MGLTDH-GHVVDILSHFPQ--SSK--------IPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNP 69 (484)
Q Consensus 1 ~~L~~r-GH~Vtvvt~~~~--~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (484)
++|++| ||+||++++... ... ..+++++.++.... . + .. . ..
T Consensus 28 ~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~---~---~-----------~~------~----~~ 80 (480)
T 2vch_A 28 KRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDL---T---D-----------LS------S----ST 80 (480)
T ss_dssp HHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCC---T---T-----------SC------T----TC
T ss_pred HHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCC---C---C-----------CC------C----ch
Confidence 468998 999999998752 110 25788888874310 0 0 00 0 00
Q ss_pred chhHHHHHHHHHHhCCHHHHHHhhc---CCCc-cEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhh--------Hhh
Q psy11555 70 LLPISGEDTCEAVMSTKAALDLLHS---SKKY-DLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTA--------AER 137 (484)
Q Consensus 70 ~~~~~~~~~c~~~l~~~~l~~~l~~---~~~~-DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~--------~~~ 137 (484)
.+........ ....+.+.++++. ..++ |+||+|.++ .++..+|+++|||++.+++++..... .+.
T Consensus 81 ~~~~~~~~~~--~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~-~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 81 RIESRISLTV--TRSNPELRKVFDSFVEGGRLPTALVVDLFG-TDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp CHHHHHHHHH--HTTHHHHHHHHHHHHHTTCCCSEEEECTTC-GGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH--HhhhHHHHHHHHHhccCCCCCeEEEECCcc-hhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 1111111111 1233456666652 3578 999999985 56788999999999999988754321 111
Q ss_pred --------hCCCCCCCccCccccCCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccE
Q psy11555 138 --------FGIPDNPSYIPNAFLSYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSL 209 (484)
Q Consensus 138 --------~g~p~~~s~~P~~~~~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l 209 (484)
.+.+..|.+.|.....+.. .+++|..+.... +. +.. ...+..+.
T Consensus 158 ~~~~~~~~~~~~~~Pg~~p~~~~~l~~--~~~~~~~~~~~~-----~~---------~~~------------~~~~~~~g 209 (480)
T 2vch_A 158 VSCEFRELTEPLMLPGCVPVAGKDFLD--PAQDRKDDAYKW-----LL---------HNT------------KRYKEAEG 209 (480)
T ss_dssp CCSCGGGCSSCBCCTTCCCBCGGGSCG--GGSCTTSHHHHH-----HH---------HHH------------HHGGGCSE
T ss_pred CCCcccccCCcccCCCCCCCChHHCch--hhhcCCchHHHH-----HH---------HHH------------HhcccCCE
Confidence 1112233333322222221 122332111000 00 000 11222345
Q ss_pred EEEeccCCCCC--------CCCCCCceEEEcccccCCC----CCCccchHHHhhhcC-ceEEEEeecceeccCCCChHHH
Q psy11555 210 VLVNSHFTFIG--------SRPYPNNVIEVAGLHVKSP----QPLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKR 276 (484)
Q Consensus 210 ~l~ns~~~l~~--------~~p~~p~v~~vG~~~~~~~----~~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~ 276 (484)
+++|+...++. +++..|++++|||++.... .+.++++.+|++..+ +++|||||||... .+.+.+
T Consensus 210 ~~~nt~~ele~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~---~~~~~~ 286 (480)
T 2vch_A 210 ILVNTFFELEPNAIKALQEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGT---LTCEQL 286 (480)
T ss_dssp EEESCCTTTSHHHHHHHHSCCTTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCC---CCHHHH
T ss_pred EEEcCHHHHhHHHHHHHHhcccCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccC---CCHHHH
Confidence 56777777765 3332478999999987542 236678999999864 7999999999953 567889
Q ss_pred HHHHHHHhcCCcEEEEEecCCC---------------C-CCCCCcE---------EEecccCcccccccCceeEEEecCC
Q psy11555 277 KAFLRAFEQIPQRVIWKWEGEN---------------M-SGKIDKI---------LLKSWAPQRDILDHPNVKVFISHGG 331 (484)
Q Consensus 277 ~~~~~a~~~~~~~~i~~~~~~~---------------~-~~~~~nv---------~~~~~~pq~~ll~h~~~~~~IthgG 331 (484)
..++++++..+++|||+++... . ..+|+|+ .+.+|+||.++|.|+++++||||||
T Consensus 287 ~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG 366 (480)
T 2vch_A 287 NELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCG 366 (480)
T ss_dssp HHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCC
T ss_pred HHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEeccc
Confidence 9999999999999999987532 1 1367775 4445999999999999999999999
Q ss_pred cchHHHHHhcCCceeeccCCCchHHHHHHH-HHcCcEEEecCC---CCCHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Q psy11555 332 FLGTTEALYSGVPIIGIPMFGDQKANIRVV-EKAGFGVTLPYD---QITEETVLVALRTVLG---NPSYKKRAEKVARLF 404 (484)
Q Consensus 332 ~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~-~~~G~g~~l~~~---~~~~~~l~~ai~~~l~---~~~~~~~a~~~~~~~ 404 (484)
+||++||+++|||+|++|+++||+.||+++ ++.|+|+.++.. .++.++|.++|+++|+ +++||++|+++++.+
T Consensus 367 ~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~ 446 (480)
T 2vch_A 367 WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAA 446 (480)
T ss_dssp HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997 799999999765 7899999999999998 788999999999988
Q ss_pred hC---CCCChHHHHHHHHHHHHHcCCCCCcccc
Q psy11555 405 QD---RPMPPLDTAIYWIEHVIRHGGGAHLRPA 434 (484)
Q Consensus 405 ~~---~~~~~~~~~~~~ie~~~~~~~~~~l~~~ 434 (484)
++ .--.+.......|+++-+ +.++++.+
T Consensus 447 ~~a~~~gGss~~~~~~~v~~~~~--~~~~~~~~ 477 (480)
T 2vch_A 447 CRVLKDDGTSTKALSLVALKWKA--HKKELEQN 477 (480)
T ss_dssp HHHTSTTSHHHHHHHHHHHHHHH--HHHHHHC-
T ss_pred HHHHhcCCCHHHHHHHHHHHHHH--hHHHhhhc
Confidence 76 322223445566666543 45555443
No 3
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.8e-42 Score=346.46 Aligned_cols=377 Identities=16% Similarity=0.126 Sum_probs=263.7
Q ss_pred ChhhhcCCeEEEEeecCCCC--CCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQSS--KIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|++|||+||++++..... ...+++++.++.... +... . .. ..+. ......
T Consensus 22 ~~L~~~Gh~V~~~~~~~~~~~v~~~g~~~~~i~~~~~----~~~~-------~---~~------~~~~------~~~~~~ 75 (415)
T 1iir_A 22 VRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSAR----APIQ-------R---AK------PLTA------EDVRRF 75 (415)
T ss_dssp HHHHHTTCEEEEEECGGGHHHHHHTTCCEEECCC------------------C---CS------CCCH------HHHHHH
T ss_pred HHHHHCCCeEEEEcCHHHHHHHHHcCCeeeeCCCCHH----HHhh-------c---cc------ccch------HHHHHH
Confidence 37899999999999964211 225788888875421 1111 0 00 0000 011222
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhh--HHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCC
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDC--FLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDS 156 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~--~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~ 156 (484)
+...+ ...+.++++...+||+||+|..+..| +..+|+++|||+|.+.+.+... +..++|....+
T Consensus 76 ~~~~~-~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~----------~~~~~p~~~~~--- 141 (415)
T 1iir_A 76 TTEAI-ATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV----------PSPYYPPPPLG--- 141 (415)
T ss_dssp HHHHH-HHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS----------CCSSSCCCC-----
T ss_pred HHHHH-HHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC----------CCcccCCccCC---
Confidence 32221 11233443225689999999733578 8889999999999988765322 12344544332
Q ss_pred CCCHHHH-HHHHHHHHHHH-HHHHHhcChHHHHHHHHhcCC-CCCCHHHhhccccEEEEeccCCCCC-CCCCCCceEEEc
Q psy11555 157 DMNFVQR-MFNSITTLSIN-LMRKYYYDPKHHKVATKYFGE-DLPPLDQLARNTSLVLVNSHFTFIG-SRPYPNNVIEVA 232 (484)
Q Consensus 157 ~~sf~~R-~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~~~~~~~l~~~~~l~l~ns~~~l~~-~~p~~p~v~~vG 232 (484)
+++.++ ..|.+.+.... .....+ .+..++. ++.+|. ..+++.+..++. +.++|+++.+++ +++.. ++++||
T Consensus 142 -~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~~~-~~~~vG 216 (415)
T 1iir_A 142 -EPSTQDTIDIPAQWERNNQSAYQRY-GGLLNSH-RDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQPTDL-DAVQTG 216 (415)
T ss_dssp --------CHHHHHHHHHHHHHHHHH-HHHHHHH-HHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCCCCSS-CCEECC
T ss_pred -ccccchHHHHHHHHHHHHHHHHHHh-HHHHHHH-HHHcCCCCCCccccccCCC-CEEEeeChhhcCCCcccC-CeEeeC
Confidence 234233 45554433222 212211 1333444 444553 234566666666 899999999998 66544 899999
Q ss_pred ccccCCCCCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC--CCCCCCcEEEec
Q psy11555 233 GLHVKSPQPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN--MSGKIDKILLKS 310 (484)
Q Consensus 233 ~~~~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~--~~~~~~nv~~~~ 310 (484)
++..++..+.++++.+|++..+ ++|||++||.. .+.+..+.+++++++++.+++|.++... ....++|+.+.+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~~-~~v~v~~Gs~~----~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~ 291 (415)
T 1iir_A 217 AWILPDERPLSPELAAFLDAGP-PPVYLGFGSLG----APADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIG 291 (415)
T ss_dssp CCCCCCCCCCCHHHHHHHHTSS-CCEEEECC-------CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECS
T ss_pred CCccCcccCCCHHHHHHHhhCC-CeEEEeCCCCC----CcHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeC
Confidence 9987654556788999998765 89999999984 4678889999999999999999877532 234578999999
Q ss_pred ccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 311 WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 311 ~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
|+||.++| +++++||||||+||+.||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|.++|+++ +|
T Consensus 292 ~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 292 EVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LT 368 (415)
T ss_dssp SCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS
T ss_pred cCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC
Confidence 99999998 8999999999999999999999999999999999999999999999999988889999999999999 99
Q ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCcc
Q psy11555 391 PSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLR 432 (484)
Q Consensus 391 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~l~ 432 (484)
++++++|+++++.++. .++.++++++||++++++|.+||-
T Consensus 369 ~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~ 408 (415)
T 1iir_A 369 PETHARATAVAGTIRT--DGAAVAARLLLDAVSREKPTVSAL 408 (415)
T ss_dssp HHHHHHHHHHHHHSCS--CHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHhh--cChHHHHHHHHHHHHhcccHHHHh
Confidence 9999999999999876 689999999999999999888764
No 4
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.8e-41 Score=340.57 Aligned_cols=310 Identities=17% Similarity=0.139 Sum_probs=233.5
Q ss_pred CCCccEEEEcccchhh--HHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCCCH-HHHHHHHHHHH
Q psy11555 95 SKKYDLIITEVFNTDC--FLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDMNF-VQRMFNSITTL 171 (484)
Q Consensus 95 ~~~~DlvI~d~~~~~~--~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~sf-~~R~~n~~~~~ 171 (484)
..+||+||+|.++..| +..+|+.+|||+|.+.+.+... +.+++| ...+ +++ .+|+.|.+.+.
T Consensus 92 ~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~----------~~~~~p-~~~~----~~~~~~r~~n~~~~~ 156 (416)
T 1rrv_A 92 AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL----------ASPHLP-PAYD----EPTTPGVTDIRVLWE 156 (416)
T ss_dssp TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS----------CCSSSC-CCBC----SCCCTTCCCHHHHHH
T ss_pred hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC----------CCcccC-CCCC----CCCCchHHHHHHHHH
Confidence 4689999999744567 7889999999999887765321 112333 1111 222 22333433322
Q ss_pred HHH-HHHHHhcChHHHHHHHHhcCC-CCCCHHHhhccccEEEEeccCCCCCCCCCCCceEEEcccccCCCCCCccchHHH
Q psy11555 172 SIN-LMRKYYYDPKHHKVATKYFGE-DLPPLDQLARNTSLVLVNSHFTFIGSRPYPNNVIEVAGLHVKSPQPLPNDIKKF 249 (484)
Q Consensus 172 ~~~-~~~~~~~~~~~~~~~~~~~g~-~~~~~~~l~~~~~l~l~ns~~~l~~~~p~~p~v~~vG~~~~~~~~~l~~~l~~~ 249 (484)
... .....+ .+..++..+ .+|. +.+++.++..+. ++++|+.+.++++++.. ++++||++..+...+.++++.+|
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~~~~-~~~~vG~~~~~~~~~~~~~~~~~ 232 (416)
T 1rrv_A 157 ERAARFADRY-GPTLNRRRA-EIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQPDV-DAVQTGAWLLSDERPLPPELEAF 232 (416)
T ss_dssp HHHHHHHHHH-HHHHHHHHH-HTTCCCCSCHHHHTTCS-SCEECSCTTTSCCCSSC-CCEECCCCCCCCCCCCCHHHHHH
T ss_pred HHHHHHHHHh-HHHHHHHHH-HcCCCCCCchhhhccCC-CeEEccCccccCCCCCC-CeeeECCCccCccCCCCHHHHHH
Confidence 111 111111 133444444 3453 234566666666 89999999999876644 89999999876545567889999
Q ss_pred hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC--CCCCCcEEEecccCcccccccCceeEEE
Q psy11555 250 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--SGKIDKILLKSWAPQRDILDHPNVKVFI 327 (484)
Q Consensus 250 l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~--~~~~~nv~~~~~~pq~~ll~h~~~~~~I 327 (484)
++..+ ++|||++||... ..+.+.++.+++++++.+.+++|.++.... ...++|+.+.+|+||.++| +++++||
T Consensus 233 l~~~~-~~v~v~~Gs~~~--~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll--~~~d~~v 307 (416)
T 1rrv_A 233 LAAGS-PPVHIGFGSSSG--RGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF--RRVAAVI 307 (416)
T ss_dssp HHSSS-CCEEECCTTCCS--HHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG--GGSSEEE
T ss_pred HhcCC-CeEEEecCCCCc--cChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHh--ccCCEEE
Confidence 98665 899999999842 135678889999999999999998776432 3467899999999999999 8999999
Q ss_pred ecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCC
Q psy11555 328 SHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDR 407 (484)
Q Consensus 328 thgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~ 407 (484)
||||+||++||+++|+|+|++|.++||..||+++++.|+|+.++.++++.++|.++|+++ +|++|+++|+++++.+++
T Consensus 308 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~- 385 (416)
T 1rrv_A 308 HHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPETRARAEAVAGMVLT- 385 (416)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC-
T ss_pred ecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh-
Confidence 999999999999999999999999999999999999999999988889999999999999 999999999999998887
Q ss_pred CCChHHHHHHHH-HHHHHcCCCCCcc
Q psy11555 408 PMPPLDTAIYWI-EHVIRHGGGAHLR 432 (484)
Q Consensus 408 ~~~~~~~~~~~i-e~~~~~~~~~~l~ 432 (484)
.++. +++++| |+++++++.+|+-
T Consensus 386 -~~~~-~~~~~i~e~~~~~~~~~~~~ 409 (416)
T 1rrv_A 386 -DGAA-AAADLVLAAVGREKPAVPAL 409 (416)
T ss_dssp -CHHH-HHHHHHHHHHHC--------
T ss_pred -cCcH-HHHHHHHHHHhccCCCCcch
Confidence 5788 999999 9999998887763
No 5
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.7e-41 Score=339.79 Aligned_cols=354 Identities=19% Similarity=0.256 Sum_probs=247.3
Q ss_pred ChhhhcC--CeEEEEeecC-------CC-CCCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccc
Q psy11555 1 MGLTDHG--HVVDILSHFP-------QS-SKIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPL 70 (484)
Q Consensus 1 ~~L~~rG--H~Vtvvt~~~-------~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (484)
+.|++|| |.||++++.. .. ....+++++.++..+.+. .+ ..-. ...
T Consensus 35 k~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~----~~-------------------~~~~-~~~ 90 (454)
T 3hbf_A 35 KKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKG----YV-------------------SSGN-PRE 90 (454)
T ss_dssp HHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTT----CC-------------------CCSC-TTH
T ss_pred HHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCC----cc-------------------ccCC-hHH
Confidence 3689999 9999999831 11 113578888887331100 00 0000 111
Q ss_pred hhHHHHHHHHHHhCCHHHHHHhhc-CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhh--------hC--
Q psy11555 71 LPISGEDTCEAVMSTKAALDLLHS-SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAER--------FG-- 139 (484)
Q Consensus 71 ~~~~~~~~c~~~l~~~~l~~~l~~-~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~--------~g-- 139 (484)
....+...+...+.+ .+.+++++ ..++|+||+|.++ +|...+|+.+|||.+.+++++........ .|
T Consensus 91 ~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~iI~D~~~-~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~ 168 (454)
T 3hbf_A 91 PIFLFIKAMQENFKH-VIDEAVAETGKNITCLVTDAFF-WFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSK 168 (454)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHCCCCCEEEEETTC-TTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHhhcCCCCcEEEECCcc-hHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCC
Confidence 122222333333322 23444432 3589999999985 89999999999999999988765432110 01
Q ss_pred --C-CCCCCccCcccc-CCCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEecc
Q psy11555 140 --I-PDNPSYIPNAFL-SYDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSH 215 (484)
Q Consensus 140 --~-p~~~s~~P~~~~-~~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~ 215 (484)
. ..+..++|.+.. ...+-+++... +. .....+.+.+ ..+...+++.+++||+
T Consensus 169 ~~~~~~~~~~iPg~p~~~~~dlp~~~~~--~~--------------~~~~~~~~~~--------~~~~~~~~~~vl~ns~ 224 (454)
T 3hbf_A 169 EVHDVKSIDVLPGFPELKASDLPEGVIK--DI--------------DVPFATMLHK--------MGLELPRANAVAINSF 224 (454)
T ss_dssp HHTTSSCBCCSTTSCCBCGGGSCTTSSS--CT--------------TSHHHHHHHH--------HHHHGGGSSCEEESSC
T ss_pred ccccccccccCCCCCCcChhhCchhhcc--CC--------------chHHHHHHHH--------HHHhhccCCEEEECCh
Confidence 0 011112343210 01111111100 00 0000011111 1122345779999999
Q ss_pred CCCCCC-----CCCCCceEEEcccccCCCC---CCccchHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcC
Q psy11555 216 FTFIGS-----RPYPNNVIEVAGLHVKSPQ---PLPNDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI 286 (484)
Q Consensus 216 ~~l~~~-----~p~~p~v~~vG~~~~~~~~---~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~ 286 (484)
+.+|++ ++..|+++.|||++...++ +.++++.+||+.. ++++|||||||... .+.+.+.++++++++.
T Consensus 225 ~eLE~~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~---~~~~~~~el~~~l~~~ 301 (454)
T 3hbf_A 225 ATIHPLIENELNSKFKLLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVT---PPPHELTALAESLEEC 301 (454)
T ss_dssp GGGCHHHHHHHHTTSSCEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHH
T ss_pred hHhCHHHHHHHHhcCCCEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCc---CCHHHHHHHHHHHHhC
Confidence 999986 7777899999999875432 2256799999986 48999999999964 6678899999999999
Q ss_pred CcEEEEEecCCC---CCC-----CCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHH
Q psy11555 287 PQRVIWKWEGEN---MSG-----KIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI 358 (484)
Q Consensus 287 ~~~~i~~~~~~~---~~~-----~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na 358 (484)
+++|||+++++. +++ .++|+++.+|+||.++|.|+.+++||||||+||++|++++|||+|++|+++||+.||
T Consensus 302 ~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na 381 (454)
T 3hbf_A 302 GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNT 381 (454)
T ss_dssp CCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred CCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHH
Confidence 999999998642 222 357999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHc-CcEEEecCCCCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHhCC
Q psy11555 359 RVVEKA-GFGVTLPYDQITEETVLVALRTVLGNP---SYKKRAEKVARLFQDR 407 (484)
Q Consensus 359 ~~~~~~-G~g~~l~~~~~~~~~l~~ai~~~l~~~---~~~~~a~~~~~~~~~~ 407 (484)
+++++. |+|+.++.+.++.++|.++|+++|+|+ +||++|+++++.+++.
T Consensus 382 ~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a 434 (454)
T 3hbf_A 382 ILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKA 434 (454)
T ss_dssp HHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHh
Confidence 999995 999999888899999999999999887 7999999999998753
No 6
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.5e-39 Score=329.42 Aligned_cols=301 Identities=19% Similarity=0.331 Sum_probs=218.7
Q ss_pred CCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhH--------hhhCCCC-------CCCccCccccCCCCCCCH
Q psy11555 96 KKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAA--------ERFGIPD-------NPSYIPNAFLSYDSDMNF 160 (484)
Q Consensus 96 ~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~--------~~~g~p~-------~~s~~P~~~~~~~~~~sf 160 (484)
.+||+||+|.++ .|+..+|+++|||+|.+++++...... ...|.+. ...++|.... +
T Consensus 111 ~~~d~vI~D~~~-~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~-----~-- 182 (456)
T 2c1x_A 111 RPVSCLVADAFI-WFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSK-----V-- 182 (456)
T ss_dssp CCCCEEEEETTS-TTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCTTCTTCBCTTSTTCTT-----C--
T ss_pred CCceEEEECCch-HhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcccccccccccccCCCCCc-----c--
Confidence 689999999985 688999999999999999887543311 1223221 1112333210 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----CCCCCceEEEcccc
Q psy11555 161 VQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-----RPYPNNVIEVAGLH 235 (484)
Q Consensus 161 ~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-----~p~~p~v~~vG~~~ 235 (484)
|+.+.-.... .... .....+.+.+. .+..++++.+++||++.++++ ++..|++++|||++
T Consensus 183 --~~~~lp~~~~----~~~~-~~~~~~~~~~~--------~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~vGpl~ 247 (456)
T 2c1x_A 183 --RFRDLQEGIV----FGNL-NSLFSRMLHRM--------GQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFN 247 (456)
T ss_dssp --BGGGSCTTTS----SSCT-TSHHHHHHHHH--------HHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEECCCHH
T ss_pred --cHHhCchhhc----CCCc-ccHHHHHHHHH--------HHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEecCcc
Confidence 0000000000 0000 00011111111 123456789999999999987 66668999999998
Q ss_pred cCCCC-CCc--cchHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC---CCC-----CC
Q psy11555 236 VKSPQ-PLP--NDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSG-----KI 303 (484)
Q Consensus 236 ~~~~~-~l~--~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~---~~~-----~~ 303 (484)
...+. .++ .++.+|++.. ++++|||||||... .+.+.+..++++++..+++|+|++++.. +++ .+
T Consensus 248 ~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~---~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~ 324 (456)
T 2c1x_A 248 LITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTT---PPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTR 324 (456)
T ss_dssp HHC---------CHHHHHHTSCTTCEEEEECCSSCC---CCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHT
T ss_pred cCcccccccchhhHHHHHhcCCCcceEEEecCcccc---CCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhcC
Confidence 65432 122 4688999986 47999999999964 4578889999999988999999998643 222 25
Q ss_pred CcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc-CcEEEecCCCCCHHHHHH
Q psy11555 304 DKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-GFGVTLPYDQITEETVLV 382 (484)
Q Consensus 304 ~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~l~~ 382 (484)
+|+++.+|+||.++|.|+++++||||||+||++||+++|||+|++|+++||+.||+++++. |+|+.++.++++.++|.+
T Consensus 325 ~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~ 404 (456)
T 2c1x_A 325 GYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMS 404 (456)
T ss_dssp TTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHH
T ss_pred CceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999 999999878899999999
Q ss_pred HHHHHhCCH---HHHHHHHHHHHHHhCCC-CCh--HHHHHHHHHHH
Q psy11555 383 ALRTVLGNP---SYKKRAEKVARLFQDRP-MPP--LDTAIYWIEHV 422 (484)
Q Consensus 383 ai~~~l~~~---~~~~~a~~~~~~~~~~~-~~~--~~~~~~~ie~~ 422 (484)
+|+++|+|+ +||++|+++++.+++.. .+| ....-..|+++
T Consensus 405 ~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~ 450 (456)
T 2c1x_A 405 CFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 450 (456)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHH
Confidence 999999987 89999999999997531 122 34445556654
No 7
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.1e-39 Score=326.13 Aligned_cols=291 Identities=20% Similarity=0.287 Sum_probs=208.4
Q ss_pred CHHHHHHhhc--CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHh--h--h---C---CCCC---CCccCc
Q psy11555 85 TKAALDLLHS--SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAE--R--F---G---IPDN---PSYIPN 149 (484)
Q Consensus 85 ~~~l~~~l~~--~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~--~--~---g---~p~~---~s~~P~ 149 (484)
.+.+++++++ ..+||+||+|.++ .|+..+|+++|||++.+++++....... . . + .+.. +..+|.
T Consensus 100 ~~~~~~ll~~~~~~~~d~vI~D~~~-~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg 178 (463)
T 2acv_A 100 IPHVKATIKTILSNKVVGLVLDFFC-VSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPG 178 (463)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEEGGG-GGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGGCEECCTT
T ss_pred hHHHHHHHHhccCCCCeEEEECCcc-hhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccCceeECCC
Confidence 3456777752 3689999999985 6777899999999998888765432111 0 0 0 0000 112232
Q ss_pred cccCCC--C-CCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-----
Q psy11555 150 AFLSYD--S-DMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS----- 221 (484)
Q Consensus 150 ~~~~~~--~-~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~----- 221 (484)
...... + ...+.+| .+.+. .+. ... ...+..+.+++||...++.+
T Consensus 179 ~~~~~~~~~l~~~~~~~-~~~~~---------~~~-----~~~------------~~~~~~~~~l~nt~~ele~~~~~~l 231 (463)
T 2acv_A 179 ISNQVPSNVLPDACFNK-DGGYI---------AYY-----KLA------------ERFRDTKGIIVNTFSDLEQSSIDAL 231 (463)
T ss_dssp CSSCEEGGGSCHHHHCT-TTHHH---------HHH-----HHH------------HHHTTSSEEEESCCHHHHHHHHHHH
T ss_pred CCCCCChHHCchhhcCC-chHHH---------HHH-----HHH------------HhcccCCEEEECCHHHHhHHHHHHH
Confidence 201000 0 0112222 11000 000 000 01122344566666665542
Q ss_pred ----CCCCCceEEEcccccCCC-C------CCccchHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcE
Q psy11555 222 ----RPYPNNVIEVAGLHVKSP-Q------PLPNDIKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQR 289 (484)
Q Consensus 222 ----~p~~p~v~~vG~~~~~~~-~------~l~~~l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~ 289 (484)
+| .|++++|||++.... . +.+.++.+|++..+ +++|||+|||... ..+.+.+..+++++++.+++
T Consensus 232 ~~~~~p-~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~--~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 232 YDHDEK-IPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGV--SFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HHHCTT-SCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCC--CCCHHHHHHHHHHHHHHTCE
T ss_pred Hhcccc-CCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccc--cCCHHHHHHHHHHHHhCCCc
Confidence 12 678999999986542 1 23467899999864 7899999999962 35678899999999998999
Q ss_pred EEEEecCC--CCCC-----C--CCcEEEecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHH
Q psy11555 290 VIWKWEGE--NMSG-----K--IDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRV 360 (484)
Q Consensus 290 ~i~~~~~~--~~~~-----~--~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~ 360 (484)
|||+++++ .+++ . ++|+++.+|+||.++|.||++++||||||+||++||+++|||+|++|+++||+.||++
T Consensus 309 ~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~ 388 (463)
T 2acv_A 309 FLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 388 (463)
T ss_dssp EEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred EEEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHH
Confidence 99999864 2322 2 6789999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHcCcEEEe-c---CC--CCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHhC
Q psy11555 361 V-EKAGFGVTL-P---YD--QITEETVLVALRTVLG-NPSYKKRAEKVARLFQD 406 (484)
Q Consensus 361 ~-~~~G~g~~l-~---~~--~~~~~~l~~ai~~~l~-~~~~~~~a~~~~~~~~~ 406 (484)
+ ++.|+|+.+ + .+ .++.++|.++|+++|+ +++||++|+++++.+++
T Consensus 389 lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~ 442 (463)
T 2acv_A 389 LVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRN 442 (463)
T ss_dssp HHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHH
T ss_pred HHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 5 899999999 3 34 6899999999999997 47999999999998876
No 8
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.3e-37 Score=310.30 Aligned_cols=356 Identities=16% Similarity=0.157 Sum_probs=253.4
Q ss_pred ChhhhcCCeEEEEeecCC--CCCCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQ--SSKIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|.+|||+|+|+++... .....+++++.++...... .. ... .........+.......
T Consensus 22 ~~L~~~Gh~V~v~~~~~~~~~v~~~g~~~~~l~~~~~~~----~~-----------~~~----~~~~~~~~~~~~~~~~~ 82 (404)
T 3h4t_A 22 ARLRELGADARMCLPPDYVERCAEVGVPMVPVGRAVRAG----AR-----------EPG----ELPPGAAEVVTEVVAEW 82 (404)
T ss_dssp HHHHHTTCCEEEEECGGGHHHHHHTTCCEEECSSCSSGG----GS-----------CTT----CCCTTCGGGHHHHHHHH
T ss_pred HHHHHCCCeEEEEeCHHHHHHHHHcCCceeecCCCHHHH----hc-----------ccc----CCHHHHHHHHHHHHHHH
Confidence 379999999999998421 1123578888887552211 00 000 00001111112211111
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhh--HHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCC
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDC--FLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDS 156 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~--~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~ 156 (484)
++ .+.+.+ .++|+||+|...... +..+|+++|||++.+..++...... ++
T Consensus 83 ~~------~l~~~~---~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~----------~~--------- 134 (404)
T 3h4t_A 83 FD------KVPAAI---EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE----------QS--------- 134 (404)
T ss_dssp HH------HHHHHH---TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG----------SC---------
T ss_pred HH------HHHHHh---cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh----------hH---------
Confidence 11 223333 379999998653222 2678999999999888765421110 00
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCC-CCCHHHhhccccEEEEeccCCCCCCCCCCCceEEEcccc
Q psy11555 157 DMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGED-LPPLDQLARNTSLVLVNSHFTFIGSRPYPNNVIEVAGLH 235 (484)
Q Consensus 157 ~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~l~~~~~l~l~ns~~~l~~~~p~~p~v~~vG~~~ 235 (484)
....+..+... ...+ ....++..++ +|.+ .....+.. ..+..+++.++.+.+..+++++++++|++.
T Consensus 135 --~~~~~~~~~~~-------~~~~-~~~~~~~~~~-lgl~~~~~~~~~~-~~~~~l~~~~~~l~p~~~~~~~~~~~G~~~ 202 (404)
T 3h4t_A 135 --QAERDMYNQGA-------DRLF-GDAVNSHRAS-IGLPPVEHLYDYG-YTDQPWLAADPVLSPLRPTDLGTVQTGAWI 202 (404)
T ss_dssp --HHHHHHHHHHH-------HHHH-HHHHHHHHHH-TTCCCCCCHHHHH-HCSSCEECSCTTTSCCCTTCCSCCBCCCCC
T ss_pred --HHHHHHHHHHH-------HHHh-HHHHHHHHHH-cCCCCCcchhhcc-ccCCeEEeeCcceeCCCCCCCCeEEeCccc
Confidence 11112222211 1111 1223344443 4532 23333221 234567788888888788889999999987
Q ss_pred cCCCCCCccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC--CCCCCcEEEecccC
Q psy11555 236 VKSPQPLPNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--SGKIDKILLKSWAP 313 (484)
Q Consensus 236 ~~~~~~l~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~--~~~~~nv~~~~~~p 313 (484)
.+...++++++.+|++..+ ++|||++||... +.+.++.+++++++.+.+++|..++... ...++|+++.+|+|
T Consensus 203 ~~~~~~~~~~l~~~l~~~~-~~Vlv~~Gs~~~----~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~ 277 (404)
T 3h4t_A 203 LPDQRPLSAELEGFLRAGS-PPVYVGFGSGPA----PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVN 277 (404)
T ss_dssp CCCCCCCCHHHHHHHHTSS-CCEEECCTTSCC----CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCC
T ss_pred cCCCCCCCHHHHHHHhcCC-CeEEEECCCCCC----cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCC
Confidence 7666778899999998654 899999999942 6778999999999999999999886432 34578999999999
Q ss_pred cccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 314 QRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 314 q~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
|.+++ +++++||||||+||+.||+++|+|+|++|+++||..||+++++.|+|+.++.++++.++|.++|+++++ ++|
T Consensus 278 ~~~ll--~~~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~ 354 (404)
T 3h4t_A 278 HQVLF--GRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGI 354 (404)
T ss_dssp HHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHH
T ss_pred HHHHH--hhCcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHH
Confidence 99999 789999999999999999999999999999999999999999999999999888999999999999998 999
Q ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcC
Q psy11555 394 KKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHG 426 (484)
Q Consensus 394 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~ 426 (484)
+++|+++++.+.+ ++.++++++||++++.+
T Consensus 355 ~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 355 RARAAAVAGTIRT---DGTTVAAKLLLEAISRQ 384 (404)
T ss_dssp HHHHHHHHTTCCC---CHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhh---hHHHHHHHHHHHHHhhC
Confidence 9999999998877 79999999999999864
No 9
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-36 Score=307.47 Aligned_cols=378 Identities=18% Similarity=0.195 Sum_probs=254.8
Q ss_pred ChhhhcCCeEEEEeecCCCC--CCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQSS--KIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|++|||+||++++..... ...+++++.++....+. .. . .. ............+...
T Consensus 34 ~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~-------~---~~------~~~~~~~~~~~~~~~~ 93 (424)
T 2iya_A 34 QELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKE----SN-------P---EE------SWPEDQESAMGLFLDE 93 (424)
T ss_dssp HHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCCCSCCT----TC-------T---TC------CCCSSHHHHHHHHHHH
T ss_pred HHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCcccccc----cc-------c---hh------hcchhHHHHHHHHHHH
Confidence 36899999999999853211 12367777776431100 00 0 00 0000011111222233
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhH-hhhCCCCCCC----ccCccccC
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAA-ERFGIPDNPS----YIPNAFLS 153 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~-~~~g~p~~~s----~~P~~~~~ 153 (484)
+.... +.+.++++ +.+||+||+|.+ ..|+..+|+.+|||++.+++.+...... ...+...++. +.+.....
T Consensus 94 ~~~~~--~~l~~~l~-~~~pD~VI~d~~-~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (424)
T 2iya_A 94 AVRVL--PQLEDAYA-DDRPDLIVYDIA-SWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAG 169 (424)
T ss_dssp HHHHH--HHHHHHTT-TSCCSEEEEETT-CTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC-----------
T ss_pred HHHHH--HHHHHHHh-ccCCCEEEEcCc-ccHHHHHHHhcCCCEEEEecccccccccccccccccccccccccccccccc
Confidence 33222 35777786 789999999987 4688889999999999888765422111 0110000000 00000000
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-CCCCCceEEEc
Q psy11555 154 YDSDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-RPYPNNVIEVA 232 (484)
Q Consensus 154 ~~~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-~p~~p~v~~vG 232 (484)
..+...+..+... ...+. ...++.+++ .|.+ ..........+.+++++.+.++++ .++++++++||
T Consensus 170 ~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~-~g~~-~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~vG 236 (424)
T 2iya_A 170 TGDAEEGAEAEDG----------LVRFF-TRLSAFLEE-HGVD-TPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFVG 236 (424)
T ss_dssp ----------HHH----------HHHHH-HHHHHHHHH-TTCC-SCHHHHHHCCSSEEESSCTTTSTTGGGCCTTEEECC
T ss_pred cccchhhhccchh----------HHHHH-HHHHHHHHH-cCCC-CCHHHhccCCCcEEEEcchhhCCCccCCCCCEEEeC
Confidence 0111111111000 00111 233344444 3544 445556556788999999999988 56888999999
Q ss_pred ccccCCCCCCccchHHHhhh-cCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC----CCCCCCcEE
Q psy11555 233 GLHVKSPQPLPNDIKKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKIL 307 (484)
Q Consensus 233 ~~~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~----~~~~~~nv~ 307 (484)
++.... ++..+|++. .++++||+++||.. ....+.+..+++++++.+.+++|.++... +...++|++
T Consensus 237 p~~~~~-----~~~~~~~~~~~~~~~v~v~~Gs~~---~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 308 (424)
T 2iya_A 237 PTYGDR-----SHQGTWEGPGDGRPVLLIALGSAF---TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVE 308 (424)
T ss_dssp CCCCCC-----GGGCCCCCCCSSCCEEEEECCSSS---CCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEE
T ss_pred CCCCCc-----ccCCCCCccCCCCCEEEEEcCCCC---cchHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeE
Confidence 864321 112345543 34689999999995 24678889999999888889988877522 234678999
Q ss_pred EecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHH
Q psy11555 308 LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 387 (484)
Q Consensus 308 ~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~ 387 (484)
+.+|+||.++| +++++||||||+||++||+++|+|+|++|.+.||..||+++++.|+|+.++.++++.++|.++|+++
T Consensus 309 ~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 386 (424)
T 2iya_A 309 VHQWVPQLDIL--TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAV 386 (424)
T ss_dssp EESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHH
T ss_pred EecCCCHHHHH--hhCCEEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence 99999999999 5689999999999999999999999999999999999999999999999987788999999999999
Q ss_pred hCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCC
Q psy11555 388 LGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGG 427 (484)
Q Consensus 388 l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~ 427 (484)
++|++++++++++++.+++ .++.++++++||.+++..|
T Consensus 387 l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~ 424 (424)
T 2iya_A 387 ASDPGVAERLAAVRQEIRE--AGGARAAADILEGILAEAG 424 (424)
T ss_dssp HHCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHC-
T ss_pred HcCHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHhccC
Confidence 9999999999999999988 5899999999999887643
No 10
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.1e-35 Score=298.89 Aligned_cols=168 Identities=20% Similarity=0.264 Sum_probs=139.7
Q ss_pred HHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC---CCCCCCcEEEecccCcccccccCc
Q psy11555 247 KKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILDHPN 322 (484)
Q Consensus 247 ~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~---~~~~~~nv~~~~~~pq~~ll~h~~ 322 (484)
.+|++.. ++++|||+|||....+ ...+.+..+++++++.+.+++|..++.. ....++|+++.+|+||.++| ++
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL--~~ 304 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALS-GGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALL--ET 304 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--C-CSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHH--TT
T ss_pred cccccccCCCcEEEEeCCcccccC-ccHHHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHh--hh
Confidence 3455554 3789999999986422 2335678889999999999999887643 34578999999999999999 66
Q ss_pred eeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 323 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 323 ~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
+++||||||+||++||+++|||+|++|+++||+.||+++++.|+|+.++..+++.+ +|+++|+|++||++|+++++
T Consensus 305 ~~~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~~~~~----al~~lL~d~~~r~~a~~l~~ 380 (400)
T 4amg_A 305 CDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGSLGAE----QCRRLLDDAGLREAALRVRQ 380 (400)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTTCSHH----HHHHHHHCHHHHHHHHHHHH
T ss_pred hhheeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCCchHH----HHHHHHcCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999988777654 67788999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHHH
Q psy11555 403 LFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 403 ~~~~~~~~~~~~~~~~ie~~~ 423 (484)
.++++| +.+.+++++|.++
T Consensus 381 ~~~~~~--~~~~~a~~le~lA 399 (400)
T 4amg_A 381 EMSEMP--PPAETAAXLVALA 399 (400)
T ss_dssp HHHTSC--CHHHHHHHHHHHC
T ss_pred HHHcCC--CHHHHHHHHHHhh
Confidence 999964 5677889999763
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.3e-32 Score=277.85 Aligned_cols=360 Identities=17% Similarity=0.182 Sum_probs=246.6
Q ss_pred ChhhhcCCeEEEEeecCCC--CCCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQS--SKIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|.+|||+|+++++.... ....+++++.++............ .. ...... +.......
T Consensus 42 ~~L~~~Gh~V~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~---~~~~~~~~ 102 (415)
T 3rsc_A 42 TELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDADAAEVF------------GS----DDLGVR---PHLMYLRE 102 (415)
T ss_dssp HHHHHTTCEEEEEECGGGHHHHHHTTCEEEECCCSTTTCCHHHHH------------HS----SSSCHH---HHHHHHHH
T ss_pred HHHHHCCCEEEEEeCHHHHHHHHhcCCEEEeccccccccccchhh------------cc----ccHHHH---HHHHHHHH
Confidence 4789999999999974211 112467777776431100000000 00 011111 11101222
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccC--ccccCC-C
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIP--NAFLSY-D 155 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P--~~~~~~-~ 155 (484)
....+ +.+.+.++ ..+||+||+|.....++..+|+++|||++.+.+...... .+.+ ...... .
T Consensus 103 ~~~~~--~~l~~~l~-~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-----------~~~~~~~~~~~~~~ 168 (415)
T 3rsc_A 103 NVSVL--RATAEALD-GDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE-----------HYSFSQDMVTLAGT 168 (415)
T ss_dssp HHHHH--HHHHHHHS-SSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-----------SCCHHHHHHHHHTC
T ss_pred HHHHH--HHHHHHHh-ccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-----------cccccccccccccc
Confidence 22222 35777787 889999999933357788899999999998775432110 0000 000000 0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccc-cEEEEeccCCCCCCCC-CCCceEEEcc
Q psy11555 156 SDMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNT-SLVLVNSHFTFIGSRP-YPNNVIEVAG 233 (484)
Q Consensus 156 ~~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-~l~l~ns~~~l~~~~p-~~p~v~~vG~ 233 (484)
.....+.+.. ...++.++++ |.+ +......... +..++...+.++++.. ++.++.++|+
T Consensus 169 ~~p~~~~~~~-----------------~~~~~~~~~~-g~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp 229 (415)
T 3rsc_A 169 IDPLDLPVFR-----------------DTLRDLLAEH-GLS-RSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDRFVFVGP 229 (415)
T ss_dssp CCGGGCHHHH-----------------HHHHHHHHHT-TCC-CCHHHHHTCCCSEEEESSCTTTSTTGGGCCTTEEECCC
T ss_pred CChhhHHHHH-----------------HHHHHHHHHc-CCC-CChhhhhcCCCCeEEEEcCcccCCCcccCCCceEEeCC
Confidence 0000111110 1222333333 433 3344445544 7888888888887754 5778999998
Q ss_pred cccCCCCCCccchHHHhhh-cCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----CCCCCCCcEEE
Q psy11555 234 LHVKSPQPLPNDIKKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILL 308 (484)
Q Consensus 234 ~~~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~~~~~~nv~~ 308 (484)
..... .+..+|... .++++||+++||... ...+.+..+++++++.+.+++|.+++. .+...++|+++
T Consensus 230 ~~~~~-----~~~~~~~~~~~~~~~v~v~~Gs~~~---~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~ 301 (415)
T 3rsc_A 230 CFDDR-----RFLGEWTRPADDLPVVLVSLGTTFN---DRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEA 301 (415)
T ss_dssp CCCCC-----GGGCCCCCCSSCCCEEEEECTTTSC---CCHHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEE
T ss_pred CCCCc-----ccCcCccccCCCCCEEEEECCCCCC---ChHHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEE
Confidence 65432 112223322 346899999999853 356788999999999999999988753 23456889999
Q ss_pred ecccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 309 KSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 309 ~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
.+|+|+.++| +.++++|||||.||+.||+++|+|+|++|...||..||+++++.|+|+.+..++++.++|.++|++++
T Consensus 302 ~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll 379 (415)
T 3rsc_A 302 HRWVPHVKVL--EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVA 379 (415)
T ss_dssp ESCCCHHHHH--HHEEEEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHH
T ss_pred EecCCHHHHH--hhCCEEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHH
Confidence 9999999999 77999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred CCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 389 GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 389 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+|++++++++++++.+.+ .++.++++++||.+++
T Consensus 380 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 380 ADPALLARVEAMRGHVRR--AGGAARAADAVEAYLA 413 (415)
T ss_dssp TCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHhh
Confidence 999999999999999988 5899999999998875
No 12
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.5e-33 Score=281.74 Aligned_cols=276 Identities=16% Similarity=0.206 Sum_probs=210.4
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCCCHHHHHHH
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDMNFVQRMFN 166 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~sf~~R~~n 166 (484)
++.+.++ +.+||+||+|.+ ..++..+|+.+|||+|.+...+. . + + .+.+++.
T Consensus 98 ~l~~~l~-~~~pD~Vi~~~~-~~~~~~~a~~~giP~v~~~~~~~------------~----~---~------~~~~~~~- 149 (384)
T 2p6p_A 98 RMLDFSR-AWRPDLIVGGTM-SYVAPLLALHLGVPHARQTWDAV------------D----A---D------GIHPGAD- 149 (384)
T ss_dssp HHHHHHH-HHCCSEEEEETT-CTHHHHHHHHHTCCEEEECCSSC------------C----C---T------TTHHHHH-
T ss_pred HHHHHHh-ccCCcEEEECcc-hhhHHHHHHhcCCCEEEeccCCc------------c----c---c------hhhHHHH-
Confidence 4666676 678999999986 46788899999999987753221 0 0 0 0111110
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCCCC-CceEEEcccccCCCCCCccc
Q psy11555 167 SITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRPYP-NNVIEVAGLHVKSPQPLPND 245 (484)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p~~-p~v~~vG~~~~~~~~~l~~~ 245 (484)
...++.+++ +|.+.. +..+.+++++.+.++.+++++ +++.+++. . .+.+
T Consensus 150 ----------------~~~~~~~~~-~g~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~ 199 (384)
T 2p6p_A 150 ----------------AELRPELSE-LGLERL------PAPDLFIDICPPSLRPANAAPARMMRHVAT---S----RQCP 199 (384)
T ss_dssp ----------------HHTHHHHHH-TTCSSC------CCCSEEEECSCGGGSCTTSCCCEECCCCCC---C----CCCB
T ss_pred ----------------HHHHHHHHH-cCCCCC------CCCCeEEEECCHHHCCCCCCCCCceEecCC---C----CCCC
Confidence 112233333 343211 126789999999988776554 23444421 1 1245
Q ss_pred hHHHhhh-cCceEEEEeecceeccCCC--ChHHHHHHHHHHhcCCcEEEEEecCCC---CCCCCCcEEEecccCcccccc
Q psy11555 246 IKKFLDE-SVNGVIYFSMGSIIQGKSF--PSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILD 319 (484)
Q Consensus 246 l~~~l~~-~~~~~v~vs~Gs~~~~~~~--~~~~~~~~~~a~~~~~~~~i~~~~~~~---~~~~~~nv~~~~~~pq~~ll~ 319 (484)
+.+|++. .++++||+++||....... +.+.+..+++++.+.+.+++|+.++.. +...++|+.+ +|+||.++|
T Consensus 200 ~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~~~~l- 277 (384)
T 2p6p_A 200 LEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPLDVVA- 277 (384)
T ss_dssp CCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCCHHHHG-
T ss_pred CCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCCHHHHH-
Confidence 6678876 3468999999999542001 446788899999988899999877522 1235789999 999999999
Q ss_pred cCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 320 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 320 h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
+++++||||||.||+.||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|+++++|++++++|++
T Consensus 278 -~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 356 (384)
T 2p6p_A 278 -PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQD 356 (384)
T ss_dssp -GGCSEEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -hhCCEEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred HHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 400 VARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
+++.+++. ++.+++++|||.++.|
T Consensus 357 ~~~~~~~~--~~~~~~~~~i~~~~~~ 380 (384)
T 2p6p_A 357 LSREISGM--PLPATVVTALEQLAHH 380 (384)
T ss_dssp HHHHHHTS--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHhC--CCHHHHHHHHHHHhhh
Confidence 99999994 7899999999999876
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.2e-33 Score=283.75 Aligned_cols=297 Identities=14% Similarity=0.167 Sum_probs=202.7
Q ss_pred HHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCCCHHHHHHHH
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDMNFVQRMFNS 167 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~sf~~R~~n~ 167 (484)
+.+.++ +.+||+||+|.++ .++..+|+.+|||+|.....+.. +.....+.+..+++.|. ..+.+++.+.
T Consensus 136 l~~~~~-~~~pDlVv~d~~~-~~~~~aA~~lgiP~v~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 204 (441)
T 2yjn_A 136 MVSFCR-KWRPDLVIWEPLT-FAAPIAAAVTGTPHARLLWGPDI-TTRARQNFLGLLPDQPE--------EHREDPLAEW 204 (441)
T ss_dssp HHHHHH-HHCCSEEEECTTC-THHHHHHHHHTCCEEEECSSCCH-HHHHHHHHHHHGGGSCT--------TTCCCHHHHH
T ss_pred HHHHHH-hcCCCEEEecCcc-hhHHHHHHHcCCCEEEEecCCCc-chhhhhhhhhhcccccc--------ccccchHHHH
Confidence 444455 6799999999874 78888999999999888543321 10000000000111121 0112232221
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHhcCC-CCCCHHHhhccccEEEEeccCCCCCCCCCCCceEEEcccccCCCCCCccch
Q psy11555 168 ITTLSINLMRKYYYDPKHHKVATKYFGE-DLPPLDQLARNTSLVLVNSHFTFIGSRPYPNNVIEVAGLHVKSPQPLPNDI 246 (484)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~l~~~~~l~l~ns~~~l~~~~p~~p~v~~vG~~~~~~~~~l~~~l 246 (484)
+ ++..++ +|. ... .++. ..+..+..+.+.++.+..++. ..++..... .+.++
T Consensus 205 l-----------------~~~~~~-~g~~~~~--~~~~-~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~ 257 (441)
T 2yjn_A 205 L-----------------TWTLEK-YGGPAFD--EEVV-VGQWTIDPAPAAIRLDTGLKT--VGMRYVDYN----GPSVV 257 (441)
T ss_dssp H-----------------HHHHHH-TTCCCCC--GGGT-SCSSEEECSCGGGSCCCCCCE--EECCCCCCC----SSCCC
T ss_pred H-----------------HHHHHH-cCCCCCC--cccc-CCCeEEEecCccccCCCCCCC--CceeeeCCC----CCccc
Confidence 1 122222 232 211 1222 345666666666665444431 112221111 13445
Q ss_pred HHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC---CCCCCCcEEEecccCcccccccCc
Q psy11555 247 KKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRDILDHPN 322 (484)
Q Consensus 247 ~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~---~~~~~~nv~~~~~~pq~~ll~h~~ 322 (484)
.+|++.. ++++|||++||.........+.+..+++++.+.+.+++|.+++.. +...++|+++.+|+||.++| ++
T Consensus 258 ~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ 335 (441)
T 2yjn_A 258 PEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALL--PT 335 (441)
T ss_dssp CGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHG--GG
T ss_pred chHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHH--hh
Confidence 6788743 468999999998541001335567788888888899999888643 22457899999999999998 89
Q ss_pred eeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 323 VKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 323 ~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
+++||||||.||++||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|+++++|++++++|+++++
T Consensus 336 ad~~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~ 415 (441)
T 2yjn_A 336 CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGAARMRD 415 (441)
T ss_dssp CSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHhCCCCChHHHHHHHHHHHHHcC
Q psy11555 403 LFQDRPMPPLDTAIYWIEHVIRHG 426 (484)
Q Consensus 403 ~~~~~~~~~~~~~~~~ie~~~~~~ 426 (484)
.+.+ .++.+++++.||.+++..
T Consensus 416 ~~~~--~~~~~~~~~~i~~~~~~~ 437 (441)
T 2yjn_A 416 DMLA--EPSPAEVVGICEELAAGR 437 (441)
T ss_dssp HHHT--SCCHHHHHHHHHHHHHC-
T ss_pred HHHc--CCCHHHHHHHHHHHHHhc
Confidence 9988 478999999999988753
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7e-32 Score=273.84 Aligned_cols=362 Identities=15% Similarity=0.135 Sum_probs=246.3
Q ss_pred ChhhhcCCeEEEEeecCCC--CCCCCceEEeeccchHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQS--SKIPNYNDISVEGSMKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGEDT 78 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (484)
++|.++||+||++++.... ....+++++.++....... . .. .............+...
T Consensus 29 ~~L~~~G~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~-------------~~---~~~~~~~~~~~~~~~~~ 88 (430)
T 2iyf_A 29 RELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGPD----A-------------DP---EAWGSTLLDNVEPFLND 88 (430)
T ss_dssp HHHHHTTCEEEEEECGGGHHHHHTTSCEEEECCCCSCCTT----S-------------CG---GGGCSSHHHHHHHHHHH
T ss_pred HHHHHCCCeEEEEeCHHHHHHHHhCCCEEEEcCCcCcccc----c-------------cc---cccchhhHHHHHHHHHH
Confidence 3689999999999986421 1235777777764311000 0 00 00000001111122223
Q ss_pred HHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCC
Q psy11555 79 CEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDM 158 (484)
Q Consensus 79 c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~ 158 (484)
|...+ +.+.++++ +.+||+||+|.+ ..++..+|+.+|||+|.+.+........ .+. +. .
T Consensus 89 ~~~~~--~~l~~~l~-~~~pD~Vi~d~~-~~~~~~~A~~~giP~v~~~~~~~~~~~~--~~~-------~~--------~ 147 (430)
T 2iyf_A 89 AIQAL--PQLADAYA-DDIPDLVLHDIT-SYPARVLARRWGVPAVSLSPNLVAWKGY--EEE-------VA--------E 147 (430)
T ss_dssp HHHHH--HHHHHHHT-TSCCSEEEEETT-CHHHHHHHHHHTCCEEEEESSCCCCTTH--HHH-------TH--------H
T ss_pred HHHHH--HHHHHHhh-ccCCCEEEECCc-cHHHHHHHHHcCCCEEEEeccccccccc--ccc-------cc--------c
Confidence 33332 35778887 789999999976 3678889999999999887654311100 000 00 0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCC-CCCCCc-eEEEccccc
Q psy11555 159 NFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGS-RPYPNN-VIEVAGLHV 236 (484)
Q Consensus 159 sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~-~p~~p~-v~~vG~~~~ 236 (484)
.+++++.+... ...+. ...++.++++ |.+ .+..+.....+.+++++.+.++.+ .+++++ +++||+...
T Consensus 148 ~~~~~~~~~~~-------~~~~~-~~~~~~~~~~-g~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~vG~~~~ 217 (430)
T 2iyf_A 148 PMWREPRQTER-------GRAYY-ARFEAWLKEN-GIT-EHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGACQG 217 (430)
T ss_dssp HHHHHHHHSHH-------HHHHH-HHHHHHHHHT-TCC-SCHHHHHHCCSSEEECSCGGGSTTGGGSCTTTEEECCCCC-
T ss_pred chhhhhccchH-------HHHHH-HHHHHHHHHh-CCC-CCHHHHhcCCCcEEEeCcHHhCCCcccCCCccEEEeCCcCC
Confidence 11233222100 00010 2334444443 544 455556556788999999988877 567778 999997432
Q ss_pred CCCCCCccchHHHhh-hcCceEEEEeecceeccCCCChHHHHHHHHHHhcC-CcEEEEEecCCC----CCCCCCcEEEec
Q psy11555 237 KSPQPLPNDIKKFLD-ESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGEN----MSGKIDKILLKS 310 (484)
Q Consensus 237 ~~~~~l~~~l~~~l~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~----~~~~~~nv~~~~ 310 (484)
... . ..+|.. ..++++||+++||.. ....+.+..++++++++ +.+++|.+|... +...++|+++.+
T Consensus 218 ~~~-~----~~~~~~~~~~~~~v~v~~Gs~~---~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~ 289 (430)
T 2iyf_A 218 DRA-E----EGGWQRPAGAEKVVLVSLGSAF---TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHD 289 (430)
T ss_dssp ---------CCCCCCCTTCSEEEEEECTTTC---C-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEES
T ss_pred CCC-C----CCCCccccCCCCeEEEEcCCCC---CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEe
Confidence 111 1 112333 234689999999995 25678889999999886 678888776521 334678999999
Q ss_pred ccCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 311 WAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 311 ~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
|+||.++| +.+++||+|||+||++||+++|+|+|++|..+||..||+++++.|+|+.++.++++.++|.++|.++++|
T Consensus 290 ~~~~~~~l--~~ad~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 290 WVPQLAIL--RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDD 367 (430)
T ss_dssp SCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHC
T ss_pred cCCHHHHh--hccCEEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcC
Confidence 99999999 5689999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 391 PSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 391 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
++++++++++++.+.+. .+.+.++++|+.+++.
T Consensus 368 ~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~ 400 (430)
T 2iyf_A 368 PEVARRLRRIQAEMAQE--GGTRRAADLIEAELPA 400 (430)
T ss_dssp HHHHHHHHHHHHHHHHH--CHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHhhc
Confidence 99999999999988873 6899999999887764
No 15
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.7e-31 Score=266.78 Aligned_cols=296 Identities=17% Similarity=0.202 Sum_probs=217.3
Q ss_pred HHHHHHhhcCCCccEEEEc-ccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccC--ccccC-CCCCCCHH
Q psy11555 86 KAALDLLHSSKKYDLIITE-VFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIP--NAFLS-YDSDMNFV 161 (484)
Q Consensus 86 ~~l~~~l~~~~~~DlvI~d-~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P--~~~~~-~~~~~sf~ 161 (484)
+.+.+.++ ..+||+||+| .+ ..++..+|+++|||+|.+.+...... .+.+ ..... .......+
T Consensus 92 ~~l~~~l~-~~~pD~Vi~d~~~-~~~~~~aA~~~giP~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 158 (402)
T 3ia7_A 92 RAAEEALG-DNPPDLVVYDVFP-FIAGRLLAARWDRPAVRLTGGFAANE-----------HYSLFKELWKSNGQRHPADV 158 (402)
T ss_dssp HHHHHHHT-TCCCSEEEEESTT-HHHHHHHHHHHTCCEEEEESSCCCBT-----------TBCHHHHHHHHHTCCCGGGS
T ss_pred HHHHHHHh-ccCCCEEEECchH-HHHHHHHHHhhCCCEEEEecccccCc-----------cccccccccccccccChhhH
Confidence 35777787 8899999999 54 57788899999999998765433211 0000 00000 00000001
Q ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccc-cEEEEeccCCCCCCCC-CCCceEEEcccccCCC
Q psy11555 162 QRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNT-SLVLVNSHFTFIGSRP-YPNNVIEVAGLHVKSP 239 (484)
Q Consensus 162 ~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-~l~l~ns~~~l~~~~p-~~p~v~~vG~~~~~~~ 239 (484)
.++. ...++.++++ |.. +....+.... +..++...+.++.+.. ++.++.++|+......
T Consensus 159 ~~~~-----------------~~~~~~~~~~-g~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~vGp~~~~~~ 219 (402)
T 3ia7_A 159 EAVH-----------------SVLVDLLGKY-GVD-TPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLTGRD 219 (402)
T ss_dssp HHHH-----------------HHHHHHHHTT-TCC-SCHHHHHTCCCSCEEESSCGGGSTTGGGCCTTEEECCCCCCC--
T ss_pred HHHH-----------------HHHHHHHHHc-CCC-CChhhhhcCCCCeEEEEcChHhCCccccCCCCeEEeCCCCCCcc
Confidence 1100 1122333333 432 2344444444 6778888888877654 5778999998654321
Q ss_pred CCCccchHHHhh-hcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----CCCCCCCcEEEecccCc
Q psy11555 240 QPLPNDIKKFLD-ESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSWAPQ 314 (484)
Q Consensus 240 ~~l~~~l~~~l~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~~~~~~nv~~~~~~pq 314 (484)
+...|.. ..++++||+++||... ...+.+..+++++.+.+.+++|.+++. .+...++|+++.+|+|+
T Consensus 220 -----~~~~~~~~~~~~~~v~v~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~ 291 (402)
T 3ia7_A 220 -----GQPGWQPPRPDAPVLLVSLGNQFN---EHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPF 291 (402)
T ss_dssp -------CCCCCSSTTCCEEEEECCSCSS---CCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCH
T ss_pred -----cCCCCcccCCCCCEEEEECCCCCc---chHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCH
Confidence 1112322 2346899999999953 345788999999998888999988753 23456889999999999
Q ss_pred ccccccCceeEEEecCCcchHHHHHhcCCceeeccC-CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH
Q psy11555 315 RDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY 393 (484)
Q Consensus 315 ~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~ 393 (484)
.+++ +.++++|||||.||+.||+++|+|+|++|. ..||..||+++++.|+|..+..++++.++|.++|+++++|+++
T Consensus 292 ~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~ 369 (402)
T 3ia7_A 292 HSVL--AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAV 369 (402)
T ss_dssp HHHH--TTEEEEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHH
T ss_pred HHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHH
Confidence 9999 679999999999999999999999999999 9999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 394 KKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 394 ~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
+++++++++.+.+ ..+.+++++.||.+++.
T Consensus 370 ~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 370 RERVRRMQRDILS--SGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHHHHHHHHHT--SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh--CChHHHHHHHHHHHHhh
Confidence 9999999999988 48999999999998763
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.97 E-value=3.1e-29 Score=251.75 Aligned_cols=274 Identities=19% Similarity=0.220 Sum_probs=182.0
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCCCHHHHHHH
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDMNFVQRMFN 166 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~sf~~R~~n 166 (484)
.+.++++ +.+||+|++|.. ..++..+|+.+|||+|.+....... .....
T Consensus 114 ~l~~~~~-~~~pDlVv~d~~-~~~~~~~a~~~giP~v~~~~~~~~~-----------------------------~~~~~ 162 (398)
T 4fzr_A 114 EALALAE-RWKPDLVLTETY-SLTGPLVAATLGIPWIEQSIRLASP-----------------------------ELIKS 162 (398)
T ss_dssp HHHHHHH-HHCCSEEEEETT-CTHHHHHHHHHTCCEEEECCSSCCC-----------------------------HHHHH
T ss_pred HHHHHHH-hCCCCEEEECcc-ccHHHHHHHhhCCCEEEeccCCCCc-----------------------------hhhhH
Confidence 4667776 779999999975 4678889999999998766443110 00000
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCCCC-CceEEEcccccCCCCCCccc
Q psy11555 167 SITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRPYP-NNVIEVAGLHVKSPQPLPND 245 (484)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p~~-p~v~~vG~~~~~~~~~l~~~ 245 (484)
. ...+ ....++++ +.. . ....+..+..+.+.+..+.... ..+.+++. ...+.+
T Consensus 163 ~--------~~~~-----l~~~~~~~-~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 216 (398)
T 4fzr_A 163 A--------GVGE-----LAPELAEL-GLT--D----FPDPLLSIDVCPPSMEAQPKPGTTKMRYVPY------NGRNDQ 216 (398)
T ss_dssp H--------HHHH-----THHHHHTT-TCS--S----CCCCSEEEECSCGGGC----CCCEECCCCCC------CCSSCC
T ss_pred H--------HHHH-----HHHHHHHc-CCC--C----CCCCCeEEEeCChhhCCCCCCCCCCeeeeCC------CCCCCC
Confidence 0 0011 11222332 321 1 1223455555555555442111 11112211 101334
Q ss_pred hHHHhhhc-CceEEEEeecceeccCCC-----ChHHHHHHHHHHhcCCcEEEEEecCCC---CCCCCCcEEEecccCccc
Q psy11555 246 IKKFLDES-VNGVIYFSMGSIIQGKSF-----PSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSWAPQRD 316 (484)
Q Consensus 246 l~~~l~~~-~~~~v~vs~Gs~~~~~~~-----~~~~~~~~~~a~~~~~~~~i~~~~~~~---~~~~~~nv~~~~~~pq~~ 316 (484)
+.+|+... ++++||+++|+....... ..+.+..+++++.+.+.+++|..++.. +...++|+++.+|+|+.+
T Consensus 217 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ 296 (398)
T 4fzr_A 217 VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSA 296 (398)
T ss_dssp CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCHHH
T ss_pred CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHH
Confidence 55666654 468999999999642210 446688999999998999999888642 345689999999999999
Q ss_pred ccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHH
Q psy11555 317 ILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKR 396 (484)
Q Consensus 317 ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~ 396 (484)
++ +.+++||||||.||+.||+++|+|+|++|...||..|++++++.|+|+.++.++++.++|.++|.++++|++++++
T Consensus 297 ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~ 374 (398)
T 4fzr_A 297 IM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVGN 374 (398)
T ss_dssp HG--GGCSEEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHHHH
T ss_pred HH--hhCCEEEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHH
Confidence 99 6699999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhCCCCChHHHHHHHHHH
Q psy11555 397 AEKVARLFQDRPMPPLDTAIYWIEH 421 (484)
Q Consensus 397 a~~~~~~~~~~~~~~~~~~~~~ie~ 421 (484)
|++.++.+.++ .+.++++..+|.
T Consensus 375 ~~~~~~~~~~~--~~~~~~~~~l~~ 397 (398)
T 4fzr_A 375 ARRLAAEMATL--PTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHHTTS--CCHHHHHHHHTC
T ss_pred HHHHHHHHHcC--CCHHHHHHHHhc
Confidence 99999999985 677888887763
No 17
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.6e-29 Score=221.49 Aligned_cols=166 Identities=36% Similarity=0.766 Sum_probs=147.3
Q ss_pred CCCCccchHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccc
Q psy11555 239 PQPLPNDIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDI 317 (484)
Q Consensus 239 ~~~l~~~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~l 317 (484)
++++|+++.+|++.. ++++||+++||... ..+.+.+..+++++++.+.+++|++++......++|+++.+|+|+.++
T Consensus 4 ~~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~--~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~ 81 (170)
T 2o6l_A 4 AKPLPKEMEDFVQSSGENGVVVFSLGSMVS--NMTEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDL 81 (170)
T ss_dssp CCCCCHHHHHHHHTTTTTCEEEEECCSCCT--TCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHH
T ss_pred CCCCCHHHHHHHHcCCCCCEEEEECCCCcc--cCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHH
Confidence 457889999999865 46899999999952 357788999999999889999999887554557889999999999999
Q ss_pred cccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHH
Q psy11555 318 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 397 (484)
Q Consensus 318 l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a 397 (484)
+.|+++++||||||.+|++||+++|+|+|++|...||..||+++++.|+|+.++.++++.++|.++|.++++|++|+++|
T Consensus 82 l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~a 161 (170)
T 2o6l_A 82 LGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKENV 161 (170)
T ss_dssp HTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred hcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred HHHHHHHhC
Q psy11555 398 EKVARLFQD 406 (484)
Q Consensus 398 ~~~~~~~~~ 406 (484)
+++++.+++
T Consensus 162 ~~~~~~~~~ 170 (170)
T 2o6l_A 162 MKLSRIQHD 170 (170)
T ss_dssp HHHC-----
T ss_pred HHHHHHhhC
Confidence 999988864
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.96 E-value=1e-28 Score=247.24 Aligned_cols=276 Identities=16% Similarity=0.137 Sum_probs=198.4
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCCCHHHHHHH
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDMNFVQRMFN 166 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~sf~~R~~n 166 (484)
.+.++++ ..+||+|++|.. ..++..+|+.+|||++.+........ . ....
T Consensus 105 ~l~~~l~-~~~PD~Vv~~~~-~~~~~~aa~~~giP~v~~~~~~~~~~-------------------------~---~~~~ 154 (391)
T 3tsa_A 105 EYLRLAE-AWRPSVLLVDVC-ALIGRVLGGLLDLPVVLHRWGVDPTA-------------------------G---PFSD 154 (391)
T ss_dssp HHHHHHH-HHCCSEEEEETT-CHHHHHHHHHTTCCEEEECCSCCCTT-------------------------T---HHHH
T ss_pred HHHHHHH-hcCCCEEEeCcc-hhHHHHHHHHhCCCEEEEecCCcccc-------------------------c---cccc
Confidence 4667776 779999999975 46777789999999988764331100 0 0001
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCC-CCCceEEEcccccCCCCCCccc
Q psy11555 167 SITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRP-YPNNVIEVAGLHVKSPQPLPND 245 (484)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p-~~p~v~~vG~~~~~~~~~l~~~ 245 (484)
.+ .. ..+...+++ +.... ...+..+..+.+.++.+.. ....+.+++ .. -+..
T Consensus 155 ~~--------~~-----~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~----~~~~ 207 (391)
T 3tsa_A 155 RA--------HE-----LLDPVCRHH-GLTGL------PTPELILDPCPPSLQASDAPQGAPVQYVP---YN----GSGA 207 (391)
T ss_dssp HH--------HH-----HHHHHHHHT-TSSSS------CCCSEEEECSCGGGSCTTSCCCEECCCCC---CC----CCEE
T ss_pred hH--------HH-----HHHHHHHHc-CCCCC------CCCceEEEecChhhcCCCCCccCCeeeec---CC----CCcC
Confidence 00 00 111222333 32111 1235566666666655432 111122221 00 1223
Q ss_pred hHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcC-CcEEEEEecCC---CCCCCCCcEEEecccCccccccc
Q psy11555 246 IKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-PQRVIWKWEGE---NMSGKIDKILLKSWAPQRDILDH 320 (484)
Q Consensus 246 l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~---~~~~~~~nv~~~~~~pq~~ll~h 320 (484)
..+|+... ++++|++++||.......+.+.++.++++ .+. +.+++|..++. .+...++|+++.+|+|+.+++
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll-- 284 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFL-- 284 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTG--
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHHHH--
Confidence 34555543 46899999999854222346788889998 888 56899988763 344568899999999999999
Q ss_pred CceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecC--CCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 321 PNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY--DQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~--~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
+++++||||||.||+.||+++|+|+|++|...||..|+.++++.|+|+.++. ++.+.+.|.++|.++++|++++++++
T Consensus 285 ~~ad~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~ 364 (391)
T 3tsa_A 285 RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAI 364 (391)
T ss_dssp GGCSEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHHHHHH
T ss_pred hhCCEEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999987 66899999999999999999999999
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++++.+.+. ++.++++++||.+++
T Consensus 365 ~~~~~~~~~--~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 365 KLSDEITAM--PHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHTS--CCHHHHHHHHHHC--
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHh
Confidence 999999884 778999999998765
No 19
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.96 E-value=2.9e-28 Score=244.66 Aligned_cols=345 Identities=13% Similarity=0.133 Sum_probs=222.7
Q ss_pred ChhhhcCCeEEEEeecCCC--CCCCCceEEeeccc--hHHHHHHHhhhccccCCCCccchhccccCcccccccchhHHHH
Q psy11555 1 MGLTDHGHVVDILSHFPQS--SKIPNYNDISVEGS--MKLQTNDLLLSDISYYNPLSDFFFIHQMESPVSNNPLLPISGE 76 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~~~--~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (484)
++|.+|||+|+|+++ ... ....+++++.++.. +...+........ .+..... .........+.....
T Consensus 42 ~~L~~~GheV~v~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~ 112 (398)
T 3oti_A 42 WGFRTAGHDVLIAVA-EHADRAAAAGLEVVDVAPDYSAVKVFEQVAKDNP-------RFAETVA-TRPAIDLEEWGVQIA 112 (398)
T ss_dssp HHHHHTTCEEEEEES-SCHHHHHTTTCEEEESSTTCCHHHHHHHHHHHCH-------HHHHTGG-GSCCCSGGGGHHHHH
T ss_pred HHHHHCCCEEEEecc-chHHHHHhCCCeeEecCCccCHHHHhhhcccCCc-------ccccccc-CChhhhHHHHHHHHH
Confidence 378999999999998 321 12368888888743 2211111100000 0000000 000111122222222
Q ss_pred HHHHHHhCCHHHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCC
Q psy11555 77 DTCEAVMSTKAALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDS 156 (484)
Q Consensus 77 ~~c~~~l~~~~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~ 156 (484)
..+... -..+.++++ ..+||+|++|.. ..++..+|+.+|||+|.........
T Consensus 113 ~~~~~~--~~~l~~~l~-~~~pDlVv~d~~-~~~~~~aA~~~giP~v~~~~~~~~~------------------------ 164 (398)
T 3oti_A 113 AVNRPL--VDGTMALVD-DYRPDLVVYEQG-ATVGLLAADRAGVPAVQRNQSAWRT------------------------ 164 (398)
T ss_dssp HHHGGG--HHHHHHHHH-HHCCSEEEEETT-CHHHHHHHHHHTCCEEEECCTTCCC------------------------
T ss_pred HHHHHH--HHHHHHHHH-HcCCCEEEECch-hhHHHHHHHHcCCCEEEEeccCCCc------------------------
Confidence 222222 235777777 778999999966 4677889999999998765321100
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCC-CCCceEEEcccc
Q psy11555 157 DMNFVQRMFNSITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRP-YPNNVIEVAGLH 235 (484)
Q Consensus 157 ~~sf~~R~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p-~~p~v~~vG~~~ 235 (484)
..+.... ..+ .+...+++ +.. ....+..+....+.+..+.. ....+.++..
T Consensus 165 -~~~~~~~------------~~~-----l~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 216 (398)
T 3oti_A 165 -RGMHRSI------------ASF-----LTDLMDKH-QVS-------LPEPVATIESFPPSLLLEAEPEGWFMRWVPY-- 216 (398)
T ss_dssp -TTHHHHH------------HTT-----CHHHHHHT-TCC-------CCCCSEEECSSCGGGGTTSCCCSBCCCCCCC--
T ss_pred -cchhhHH------------HHH-----HHHHHHHc-CCC-------CCCCCeEEEeCCHHHCCCCCCCCCCccccCC--
Confidence 0011110 001 11223332 321 11234555555555554421 1111111110
Q ss_pred cCCCCCCccchHHHhhh-cCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC---CCCCCCcEEEecc
Q psy11555 236 VKSPQPLPNDIKKFLDE-SVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN---MSGKIDKILLKSW 311 (484)
Q Consensus 236 ~~~~~~l~~~l~~~l~~-~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~---~~~~~~nv~~~~~ 311 (484)
.. +....+|+.. .++++||+++||..... ...+.+..+++++++.+.+++|.+++.. +...++|+++.+|
T Consensus 217 -~~----~~~~~~~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~ 290 (398)
T 3oti_A 217 -GG----GAVLGDRLPPVPARPEVAITMGTIELQA-FGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGW 290 (398)
T ss_dssp -CC----CEECCSSCCCCCSSCEEEECCTTTHHHH-HCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESS
T ss_pred -CC----CcCCchhhhcCCCCCEEEEEcCCCcccc-CcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEcc
Confidence 11 2233344443 34689999999995421 1456688899999988889999988743 3456889999999
Q ss_pred cCcccccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHH--HHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 312 APQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANI--RVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 312 ~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na--~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
+|+.++| +.+++||||||.||+.||+++|+|+|++|.++||..|| +++++.|+|+.++.++.+.+.|. ++++
T Consensus 291 ~~~~~ll--~~ad~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~ 364 (398)
T 3oti_A 291 TPLHTLL--RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIG 364 (398)
T ss_dssp CCHHHHH--TTCSEEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHH
T ss_pred CCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHc
Confidence 9999999 66999999999999999999999999999999999999 99999999999988888888777 7888
Q ss_pred CHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 390 NPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 390 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
|++++++|+++++.+.+. ++.+++++++|.+++
T Consensus 365 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~ 397 (398)
T 3oti_A 365 DESLRTAAREVREEMVAL--PTPAETVRRIVERIS 397 (398)
T ss_dssp CHHHHHHHHHHHHHHHTS--CCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHhc
Confidence 999999999999999984 778999999998764
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.95 E-value=6.6e-27 Score=235.69 Aligned_cols=282 Identities=21% Similarity=0.272 Sum_probs=201.8
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEeCCCCchhhHhhhCCCCCCCccCccccCCCCCCCHHHHHHH
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAAHIIPTAAERFGIPDNPSYIPNAFLSYDSDMNFVQRMFN 166 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~~~~~~~~~~~g~p~~~s~~P~~~~~~~~~~sf~~R~~n 166 (484)
.+.++++ +.+||+|+++.. ..++..+|+.+|||+|......... + ++..++..
T Consensus 121 ~l~~~l~-~~~pDvVv~~~~-~~~~~~aa~~~giP~v~~~~~~~~~---------------~----------~~~~~~~~ 173 (412)
T 3otg_A 121 ELQPVIE-RLRPDLVVQEIS-NYGAGLAALKAGIPTICHGVGRDTP---------------D----------DLTRSIEE 173 (412)
T ss_dssp HHHHHHH-HHCCSEEEEETT-CHHHHHHHHHHTCCEEEECCSCCCC---------------S----------HHHHHHHH
T ss_pred HHHHHHH-hcCCCEEEECch-hhHHHHHHHHcCCCEEEecccccCc---------------h----------hhhHHHHH
Confidence 4667776 779999999976 3567778999999998765432110 0 01111111
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHhcCCCCCCHHHhhccccEEEEeccCCCCCCCC-CCCceEEEcccccCCCCCCccc
Q psy11555 167 SITTLSINLMRKYYYDPKHHKVATKYFGEDLPPLDQLARNTSLVLVNSHFTFIGSRP-YPNNVIEVAGLHVKSPQPLPND 245 (484)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~l~ns~~~l~~~~p-~~p~v~~vG~~~~~~~~~l~~~ 245 (484)
..++..+++ |.+. .........+..+..+...++.+.. +......+-.. +.....+
T Consensus 174 -----------------~~~~~~~~~-g~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 230 (412)
T 3otg_A 174 -----------------EVRGLAQRL-GLDL-PPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPV----PFAEQGD 230 (412)
T ss_dssp -----------------HHHHHHHHT-TCCC-CSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCC----CCCCCCC
T ss_pred -----------------HHHHHHHHc-CCCC-CcccccCCCCeEEeeCCHHhcCCcccCCCCcceeecc----CCCCCCC
Confidence 111222332 3221 1111234556677776666665421 11111111111 0111223
Q ss_pred hHHH--hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCC----CCCCCCcEEEecccCcccccc
Q psy11555 246 IKKF--LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSWAPQRDILD 319 (484)
Q Consensus 246 l~~~--l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~----~~~~~~nv~~~~~~pq~~ll~ 319 (484)
..+| ....++++|++++|+.. ....+.+..+++++++.+.+++|..++.. +...++|+.+.+|+|..+++
T Consensus 231 ~~~~~~~~~~~~~~vlv~~G~~~---~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l- 306 (412)
T 3otg_A 231 LPAWLSSRDTARPLVYLTLGTSS---GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALL- 306 (412)
T ss_dssp CCGGGGGSCTTSCEEEEECTTTT---CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHG-
T ss_pred CCCccccccCCCCEEEEEcCCCC---cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHH-
Confidence 4455 32344689999999994 35678888999999888889999887643 33467899999999999999
Q ss_pred cCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHH
Q psy11555 320 HPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEK 399 (484)
Q Consensus 320 h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~ 399 (484)
+.+++||+|||.+|+.||+++|+|+|++|..+||..|+..+++.|.|..++.+++++++|.++|.++++|+++++++++
T Consensus 307 -~~ad~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~~~~~~ 385 (412)
T 3otg_A 307 -PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARA 385 (412)
T ss_dssp -GGCSEEEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -hcCcEEEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 6799999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 400 VARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
.++.+.+. .+.+++++.++.+++.
T Consensus 386 ~~~~~~~~--~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 386 VAAEIAAM--PGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHS--CCHHHHHTTHHHHHC-
T ss_pred HHHHHhcC--CCHHHHHHHHHHHhcc
Confidence 99999884 5789999999888753
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.90 E-value=4.3e-22 Score=196.97 Aligned_cols=161 Identities=17% Similarity=0.185 Sum_probs=132.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC----cEEEEEecCCCC-------CCCCCcEEEecccCcc-cccccCc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP----QRVIWKWEGENM-------SGKIDKILLKSWAPQR-DILDHPN 322 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~-------~~~~~nv~~~~~~pq~-~ll~h~~ 322 (484)
++.|++..||.. .....+.+.+++..++ ..++|.+|.... ...+.++.+.+|+++. +++ ..
T Consensus 180 ~~~ilv~gGs~g-----~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l--~~ 252 (365)
T 3s2u_A 180 RVNLLVLGGSLG-----AEPLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAY--AW 252 (365)
T ss_dssp CCEEEECCTTTT-----CSHHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHH--HH
T ss_pred CcEEEEECCcCC-----ccccchhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhh--cc
Confidence 578888888873 3455566777777654 367887775321 2256789999999986 566 78
Q ss_pred eeEEEecCCcchHHHHHhcCCceeeccCC----CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 323 VKVFISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 323 ~~~~IthgG~~s~~Eal~~gvP~i~~P~~----~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
+|++|||+|.+|+.|++++|+|+|++|+. ++|..||+.+++.|+|+.++.+++++++|.++|.++++|++.+++|.
T Consensus 253 aDlvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~ 332 (365)
T 3s2u_A 253 ADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMA 332 (365)
T ss_dssp CSEEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHH
T ss_pred ceEEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHH
Confidence 99999999999999999999999999873 58999999999999999999899999999999999999999999998
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+.++.+.. .++.+++++.|+.++|
T Consensus 333 ~~a~~~~~--~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 333 DQARSLAK--PEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHHTCC--TTHHHHHHHHHHHHC-
T ss_pred HHHHhcCC--ccHHHHHHHHHHHHHc
Confidence 88887766 4789999999998886
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.76 E-value=3.3e-17 Score=161.69 Aligned_cols=160 Identities=14% Similarity=0.071 Sum_probs=128.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC--cEEEEEecCCCCC-------CC-CCcEEEecccCc-ccccccCce
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP--QRVIWKWEGENMS-------GK-IDKILLKSWAPQ-RDILDHPNV 323 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~--~~~i~~~~~~~~~-------~~-~~nv~~~~~~pq-~~ll~h~~~ 323 (484)
++.|+++.|+. .+.+..+.+++++..+. .++++..|+.... +. .+||.+.+|+++ .+++ ..+
T Consensus 183 ~~~il~~~g~~-----~~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~--~~a 255 (364)
T 1f0k_A 183 PVRVLVVGGSQ-----GARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWA 255 (364)
T ss_dssp SEEEEEECTTT-----CCHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHC
T ss_pred CcEEEEEcCch-----HhHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHH--HhC
Confidence 46677777777 34566677778777653 5666766653311 11 258999999955 4566 789
Q ss_pred eEEEecCCcchHHHHHhcCCceeeccCC---CchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGIPMF---GDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAEKV 400 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~P~~---~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~ 400 (484)
+++|+++|.+++.||+++|+|+|+.|.. +||..|++.+.+.|.|..++.++++.++|.++|.++ |++.++++.+.
T Consensus 256 d~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~ 333 (364)
T 1f0k_A 256 DVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAER 333 (364)
T ss_dssp SEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHH
T ss_pred CEEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHH
Confidence 9999999988999999999999999987 799999999999999999988777799999999998 99999988888
Q ss_pred HHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 401 ARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
++.... ..+.+++++.++.+.+.
T Consensus 334 ~~~~~~--~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 334 ARAASI--PDATERVANEVSRVARA 356 (364)
T ss_dssp HHHTCC--TTHHHHHHHHHHHHHTT
T ss_pred HHHhhc--cCHHHHHHHHHHHHHHH
Confidence 877765 46788888888888876
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.55 E-value=3.8e-15 Score=134.57 Aligned_cols=123 Identities=13% Similarity=0.117 Sum_probs=94.5
Q ss_pred CceEEEEeecceeccCCCChHHHHHH-----HHHHhcCC-cEEEEEecCCCC---CC-------------CC--------
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAF-----LRAFEQIP-QRVIWKWEGENM---SG-------------KI-------- 303 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~---~~-------------~~-------- 303 (484)
+++.|||+.||.. .+ .+.+..+ ++++...+ .++++.+|.... .. .|
T Consensus 27 ~~~~VlVtgGS~~---~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 102 (224)
T 2jzc_A 27 EEKALFVTCGATV---PF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGD 102 (224)
T ss_dssp CSCCEEEECCSCC---SC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTC
T ss_pred CCCEEEEEcCCch---HH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccc
Confidence 3689999999982 12 3444444 37787777 689999887432 11 02
Q ss_pred -----------CcEEEecccCcc-cccccC-ceeEEEecCCcchHHHHHhcCCceeeccCC----CchHHHHHHHHHcCc
Q psy11555 304 -----------DKILLKSWAPQR-DILDHP-NVKVFISHGGFLGTTEALYSGVPIIGIPMF----GDQKANIRVVEKAGF 366 (484)
Q Consensus 304 -----------~nv~~~~~~pq~-~ll~h~-~~~~~IthgG~~s~~Eal~~gvP~i~~P~~----~dQ~~na~~~~~~G~ 366 (484)
-++.+.+|+++. +++ + +++++|||||.||++|++++|+|+|++|.. .||..||+++++.|+
T Consensus 103 ~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~ 180 (224)
T 2jzc_A 103 TARQYVLMNGKLKVIGFDFSTKMQSII--RDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGY 180 (224)
T ss_dssp SCEEEESTTTSSEEEECCSSSSHHHHH--HHHCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSC
T ss_pred cccccccccCCceEEEeeccchHHHHH--HhcCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCC
Confidence 155677888886 667 8 999999999999999999999999999984 469999999999999
Q ss_pred EEEecCCCCCHHHHHHHHHHH
Q psy11555 367 GVTLPYDQITEETVLVALRTV 387 (484)
Q Consensus 367 g~~l~~~~~~~~~l~~ai~~~ 387 (484)
|+.+ +.++|.++|+++
T Consensus 181 ~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSC-----APTETGLIAGLR 196 (224)
T ss_dssp CCEE-----CSCTTTHHHHHH
T ss_pred EEEc-----CHHHHHHHHHHH
Confidence 9877 345566777766
No 24
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.27 E-value=1.6e-09 Score=109.26 Aligned_cols=170 Identities=15% Similarity=0.091 Sum_probs=104.6
Q ss_pred hHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC----C---cEEEEEec----CCCC---------CCCCCc
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P---QRVIWKWE----GENM---------SGKIDK 305 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~---~~~i~~~~----~~~~---------~~~~~n 305 (484)
+++-++..++..+++..|+... .+....+++++..+ + .++++..+ +... .++.++
T Consensus 233 ~r~~~~~~~~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~ 307 (438)
T 3c48_A 233 SRRELGIPLHTKVVAFVGRLQP-----FKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKR 307 (438)
T ss_dssp HHHHTTCCSSSEEEEEESCBSG-----GGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTT
T ss_pred hHHhcCCCCCCcEEEEEeeecc-----cCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCc
Confidence 3333433334567788888743 33344455554433 2 34544433 1111 124579
Q ss_pred EEEecccCccc---ccccCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHH
Q psy11555 306 ILLKSWAPQRD---ILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEE 378 (484)
Q Consensus 306 v~~~~~~pq~~---ll~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~ 378 (484)
|.+.+++|+.+ ++ ..++++|... ..+++.||+++|+|+|+.+.. .....+++.+.|+.++.. +.+
T Consensus 308 v~~~g~~~~~~~~~~~--~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~e~i~~~~~g~~~~~~--d~~ 379 (438)
T 3c48_A 308 IRFLDPRPPSELVAVY--RAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG----GLPIAVAEGETGLLVDGH--SPH 379 (438)
T ss_dssp EEEECCCCHHHHHHHH--HHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCT----THHHHSCBTTTEEEESSC--CHH
T ss_pred EEEcCCCChHHHHHHH--HhCCEEEECccccCCchHHHHHHHcCCCEEecCCC----ChhHHhhCCCcEEECCCC--CHH
Confidence 99999998754 44 6788888653 245899999999999997653 355566666789999765 789
Q ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhCC--CCChHHHHHHHHHHHHHcCCC
Q psy11555 379 TVLVALRTVLGNPSYKKRAEKVARLFQDR--PMPPLDTAIYWIEHVIRHGGG 428 (484)
Q Consensus 379 ~l~~ai~~~l~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~ie~~~~~~~~ 428 (484)
++.++|.++++|++.++++.+.+.....+ ...-.+.....++.+++....
T Consensus 380 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 380 AWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhccc
Confidence 99999999999987665554444333222 012234444555666655433
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.23 E-value=2.2e-10 Score=113.62 Aligned_cols=166 Identities=13% Similarity=0.163 Sum_probs=104.6
Q ss_pred HHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC-----CcEEEEEecCCC-------CCCCCCcEEEecccCc
Q psy11555 247 KKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI-----PQRVIWKWEGEN-------MSGKIDKILLKSWAPQ 314 (484)
Q Consensus 247 ~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~-------~~~~~~nv~~~~~~pq 314 (484)
++.++..++..+++..|+... .+....+++++..+ +.++++..++.. ..+..++|.+.+++|+
T Consensus 189 ~~~~~~~~~~~~i~~~G~~~~-----~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~ 263 (394)
T 3okp_A 189 RKKLGFTDTTPVIACNSRLVP-----RKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEY 263 (394)
T ss_dssp HHHTTCCTTCCEEEEESCSCG-----GGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCH
T ss_pred HHhcCCCcCceEEEEEecccc-----ccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCH
Confidence 333333344577888888732 34455555555443 346666544321 1224589999999987
Q ss_pred ccccc-cCceeEEEe-----------cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHH
Q psy11555 315 RDILD-HPNVKVFIS-----------HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLV 382 (484)
Q Consensus 315 ~~ll~-h~~~~~~It-----------hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ 382 (484)
.++.. ...++++|. -|..+++.||+++|+|+|+.+..+ ....+.+ |.|..++.. +.+++.+
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i~~-~~g~~~~~~--d~~~l~~ 336 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETVTP-ATGLVVEGS--DVDKLSE 336 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGCCT-TTEEECCTT--CHHHHHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHHhc-CCceEeCCC--CHHHHHH
Confidence 65432 167888886 555678999999999999987643 2222333 489988765 7899999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 383 ALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 383 ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
+|.++++|++.++++.+-+.....+..+ .+..+.-++.+++.
T Consensus 337 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 337 LLIELLDDPIRRAAMGAAGRAHVEAEWS-WEIMGERLTNILQS 378 (394)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHTB-HHHHHHHHHHHHHS
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHH
Confidence 9999999988776666555443221134 34444444444543
No 26
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.22 E-value=2.1e-09 Score=110.50 Aligned_cols=160 Identities=11% Similarity=0.125 Sum_probs=103.9
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCc-----EEEEEecC--CC--------------C---------CCCCC
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ-----RVIWKWEG--EN--------------M---------SGKID 304 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~-----~~i~~~~~--~~--------------~---------~~~~~ 304 (484)
+..++++.|.. .+.+....+++|+..+.. ..++.+|+ +. . .++.+
T Consensus 261 ~~~~i~~vGrl-----~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~ 335 (499)
T 2r60_A 261 ELPAIIASSRL-----DQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRG 335 (499)
T ss_dssp TSCEEEECSCC-----CGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBT
T ss_pred CCcEEEEeecC-----ccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCc
Confidence 35677888887 345667788888877632 23444554 11 0 12467
Q ss_pred cEEEecccCcccccc-cCce----eEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCC
Q psy11555 305 KILLKSWAPQRDILD-HPNV----KVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQI 375 (484)
Q Consensus 305 nv~~~~~~pq~~ll~-h~~~----~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~ 375 (484)
+|.+.+++|+.++.. ...+ +++|.. |-.+++.||+++|+|+|+.... .....+.+.+.|..++..
T Consensus 336 ~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~g~l~~~~-- 409 (499)
T 2r60_A 336 KVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEILDGGKYGVLVDPE-- 409 (499)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHTGGGTSSEEECTT--
T ss_pred eEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHhcCCceEEEeCCC--
Confidence 899999998765332 1667 888843 3346899999999999997643 355566666689999765
Q ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCC---hHHHHHHHHHHHHHc
Q psy11555 376 TEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMP---PLDTAIYWIEHVIRH 425 (484)
Q Consensus 376 ~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~ie~~~~~ 425 (484)
+.+++.++|.++++|++.++++.+-+.....+..+ -.+......+.+++.
T Consensus 410 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 410 DPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999999987666655444332221123 233344445555544
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.19 E-value=4.6e-10 Score=112.93 Aligned_cols=164 Identities=12% Similarity=0.027 Sum_probs=102.1
Q ss_pred HHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC------C-cEEEEEecCCCC---------CCCCCcEEEec
Q psy11555 247 KKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI------P-QRVIWKWEGENM---------SGKIDKILLKS 310 (484)
Q Consensus 247 ~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~------~-~~~i~~~~~~~~---------~~~~~nv~~~~ 310 (484)
++-++..++ .+++..|+... +.+....+++++..+ + .++++..++... ...++++.+.+
T Consensus 243 ~~~~~~~~~-~~i~~~G~~~~----~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g 317 (439)
T 3fro_A 243 LSKFGMDEG-VTFMFIGRFDR----GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITE 317 (439)
T ss_dssp HHHHTCCSC-EEEEEECCSSC----TTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECS
T ss_pred HHHcCCCCC-cEEEEEccccc----ccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcC
Confidence 333333444 78888898840 233445555555443 3 355554443211 11346677889
Q ss_pred ccCcccccc-cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH
Q psy11555 311 WAPQRDILD-HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALR 385 (484)
Q Consensus 311 ~~pq~~ll~-h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~ 385 (484)
|+|+.++.. ...++++|.- |-.+++.||+++|+|+|+.+.. .....+ +.|.|..++.. +.+++.++|.
T Consensus 318 ~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~----~~~e~~-~~~~g~~~~~~--d~~~la~~i~ 390 (439)
T 3fro_A 318 MLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TNETGILVKAG--DPGELANAIL 390 (439)
T ss_dssp CCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESST----HHHHHC-CTTTCEEECTT--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCC----CcceeE-EcCceEEeCCC--CHHHHHHHHH
Confidence 999865421 1678888844 3346899999999999997543 333333 35699999765 7899999999
Q ss_pred HHhC-CHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 386 TVLG-NPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 386 ~~l~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++++ |++.++++.+.+.....+ .+... .+.-++.+++
T Consensus 391 ~ll~~~~~~~~~~~~~~~~~~~~-~s~~~-~~~~~~~~~~ 428 (439)
T 3fro_A 391 KALELSRSDLSKFRENCKKRAMS-FSWEK-SAERYVKAYT 428 (439)
T ss_dssp HHHHHTTTTTHHHHHHHHHHHHT-SCHHH-HHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHhh-CcHHH-HHHHHHHHHH
Confidence 9998 877766666666555433 55444 4444444454
No 28
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.17 E-value=5.7e-09 Score=102.61 Aligned_cols=161 Identities=14% Similarity=0.191 Sum_probs=107.2
Q ss_pred hHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCc------EEEEEecCCCCC---------CCCCcEEEec
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ------RVIWKWEGENMS---------GKIDKILLKS 310 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~------~~i~~~~~~~~~---------~~~~nv~~~~ 310 (484)
+++-+...++..+++..|+. .+.+....+++++..+.. ++++ +|++... ++.++|.+.+
T Consensus 186 ~~~~~~~~~~~~~i~~~G~~-----~~~K~~~~li~a~~~l~~~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~~v~~~g 259 (374)
T 2iw1_A 186 YRQKNGIKEQQNLLLQVGSD-----FGRKGVDRSIEALASLPESLRHNTLLFV-VGQDKPRKFEALAEKLGVRSNVHFFS 259 (374)
T ss_dssp HHHHTTCCTTCEEEEEECSC-----TTTTTHHHHHHHHHTSCHHHHHTEEEEE-ESSSCCHHHHHHHHHHTCGGGEEEES
T ss_pred HHHHhCCCCCCeEEEEeccc-----hhhcCHHHHHHHHHHhHhccCCceEEEE-EcCCCHHHHHHHHHHcCCCCcEEECC
Confidence 33334333446778888887 334567778888877642 4444 4432211 1357999999
Q ss_pred ccCc-ccccccCceeEEEe----cCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEec-CCCCCHHHHHHHH
Q psy11555 311 WAPQ-RDILDHPNVKVFIS----HGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLP-YDQITEETVLVAL 384 (484)
Q Consensus 311 ~~pq-~~ll~h~~~~~~It----hgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~-~~~~~~~~l~~ai 384 (484)
+..+ .+++ ..++++|. -|..+++.||+++|+|+|+.+..+ +...+++.+.|..++ .. +.+++.++|
T Consensus 260 ~~~~~~~~~--~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~e~i~~~~~g~~~~~~~--~~~~l~~~i 331 (374)
T 2iw1_A 260 GRNDVSELM--AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG----YAHYIADANCGTVIAEPF--SQEQLNEVL 331 (374)
T ss_dssp CCSCHHHHH--HHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTST----TTHHHHHHTCEEEECSSC--CHHHHHHHH
T ss_pred CcccHHHHH--HhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCC----chhhhccCCceEEeCCCC--CHHHHHHHH
Confidence 8544 2455 67888886 455678999999999999977643 456778889999996 44 789999999
Q ss_pred HHHhCCHHHHHHHHHHHHHHhCC--CCChHHHHHHHHH
Q psy11555 385 RTVLGNPSYKKRAEKVARLFQDR--PMPPLDTAIYWIE 420 (484)
Q Consensus 385 ~~~l~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~ie 420 (484)
.++++|++.++++.+.++....+ ..+..+.+..+++
T Consensus 332 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (374)
T 2iw1_A 332 RKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIIT 369 (374)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHcChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999987666655554443322 2445555555554
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.15 E-value=1.5e-09 Score=107.93 Aligned_cols=165 Identities=16% Similarity=0.158 Sum_probs=100.2
Q ss_pred hHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC----CcEEEEEecCCC---------CCCCCCcEEEeccc
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGEN---------MSGKIDKILLKSWA 312 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~---------~~~~~~nv~~~~~~ 312 (484)
+++-+...++..+++..|+.. +.+....+++++..+ +.++++..++.. ..++.++|.+.++.
T Consensus 201 ~~~~~~~~~~~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~ 275 (394)
T 2jjm_A 201 LKKEYGISESEKILIHISNFR-----KVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ 275 (394)
T ss_dssp HHHHTTCC---CEEEEECCCC-----GGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC
T ss_pred HHHHcCCCCCCeEEEEeeccc-----cccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch
Confidence 333333323356777788873 234455555655543 345555443321 11235789988875
Q ss_pred Cc-ccccccCceeEEE----ecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHH
Q psy11555 313 PQ-RDILDHPNVKVFI----SHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTV 387 (484)
Q Consensus 313 pq-~~ll~h~~~~~~I----thgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~ 387 (484)
.+ .+++ ..++++| .-|..+++.||+++|+|+|+.+..+ ....+++.+.|..++.. +.+++.++|.++
T Consensus 276 ~~~~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~~--d~~~la~~i~~l 347 (394)
T 2jjm_A 276 DNVAELL--AMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEVG--DTTGVADQAIQL 347 (394)
T ss_dssp SCTHHHH--HTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECTT--CHHHHHHHHHHH
T ss_pred hhHHHHH--HhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCCC--CHHHHHHHHHHH
Confidence 44 2455 6788888 4555678999999999999987643 22334445689998765 789999999999
Q ss_pred hCCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 388 LGNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 388 l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++|++.++++.+-+.....+..+... .+.-++.+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~ 383 (394)
T 2jjm_A 348 LKDEELHRNMGERARESVYEQFRSEK-IVSQYETIYY 383 (394)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHSCHHH-HHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHH
Confidence 99988776665555444311144333 3333333443
No 30
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.07 E-value=7.4e-09 Score=103.00 Aligned_cols=147 Identities=14% Similarity=0.155 Sum_probs=98.4
Q ss_pred eEEEEeecce-eccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCC------CCCCCCcEEEecccCcc---ccccc
Q psy11555 256 GVIYFSMGSI-IQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN------MSGKIDKILLKSWAPQR---DILDH 320 (484)
Q Consensus 256 ~~v~vs~Gs~-~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~------~~~~~~nv~~~~~~pq~---~ll~h 320 (484)
..+++..|+. .. .+....+++++..+ + .++++..++.. ..+..++|.+.+++|+. +++
T Consensus 208 ~~~i~~~G~~~~~-----~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~-- 280 (406)
T 2gek_A 208 GRTVLFLGRYDEP-----RKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAM-- 280 (406)
T ss_dssp SCEEEEESCTTSG-----GGCHHHHHHHHHHHHTTSTTCEEEEESCSCHHHHHHHTGGGGGGEEECCSCCHHHHHHHH--
T ss_pred CeEEEEEeeeCcc-----ccCHHHHHHHHHHHHHHCCCeEEEEEcCCcHHHHHHHHHhccCcEEEEecCCHHHHHHHH--
Confidence 3567777877 43 23344455554433 3 46555444322 11125789999999975 555
Q ss_pred CceeEEEecC----C-cchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 321 PNVKVFISHG----G-FLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 321 ~~~~~~Ithg----G-~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
.+++++|... | .+++.||+++|+|+|+.+. ......+.+.+.|..++.. +.+++.++|.++++|++.++
T Consensus 281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~ 354 (406)
T 2gek_A 281 RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPVD--DADGMAAALIGILEDDQLRA 354 (406)
T ss_dssp HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCTT--CHHHHHHHHHHHHHCHHHHH
T ss_pred HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCCC--CHHHHHHHHHHHHcCHHHHH
Confidence 6788888553 3 3489999999999999655 4566677777889998765 78999999999999998777
Q ss_pred HHHHHHHHHhCCCCChHHHHH
Q psy11555 396 RAEKVARLFQDRPMPPLDTAI 416 (484)
Q Consensus 396 ~a~~~~~~~~~~~~~~~~~~~ 416 (484)
++.+.+..... ..+....+.
T Consensus 355 ~~~~~~~~~~~-~~s~~~~~~ 374 (406)
T 2gek_A 355 GYVARASERVH-RYDWSVVSA 374 (406)
T ss_dssp HHHHHHHHHGG-GGBHHHHHH
T ss_pred HHHHHHHHHHH-hCCHHHHHH
Confidence 76666655544 244433333
No 31
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.07 E-value=3.4e-10 Score=106.42 Aligned_cols=109 Identities=14% Similarity=0.085 Sum_probs=86.0
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC--C------CCCCcEEEecccCccc-ccccCceeE
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM--S------GKIDKILLKSWAPQRD-ILDHPNVKV 325 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~--~------~~~~nv~~~~~~pq~~-ll~h~~~~~ 325 (484)
.+.|+|++|+. .+......+++++.... ++.+..|.... . ...+|+.+.+|+++.. ++ .++++
T Consensus 157 ~~~ILv~~GG~-----d~~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m--~~aDl 228 (282)
T 3hbm_A 157 KYDFFICMGGT-----DIKNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLM--NESNK 228 (282)
T ss_dssp CEEEEEECCSC-----CTTCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHH--HTEEE
T ss_pred CCeEEEEECCC-----chhhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHH--HHCCE
Confidence 46899999987 23446677888887654 34444554221 0 1234899999999874 66 78999
Q ss_pred EEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecC
Q psy11555 326 FISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPY 372 (484)
Q Consensus 326 ~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~ 372 (484)
+||+|| +|++|+++.|+|+|++|...+|..||+.+++.|+|..+..
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY 274 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECGG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcch
Confidence 999999 7999999999999999999999999999999999999863
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.02 E-value=3.2e-09 Score=105.84 Aligned_cols=156 Identities=13% Similarity=0.121 Sum_probs=106.8
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhc----CC-cEEEEEecCC-C----C---CCCCCcEEEecccCcc---cc
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGE-N----M---SGKIDKILLKSWAPQR---DI 317 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~----~~-~~~i~~~~~~-~----~---~~~~~nv~~~~~~pq~---~l 317 (484)
+++.++++.|.... .. +.++.+++++.. .+ .++++..+++ . + ....+++++.+++++. .+
T Consensus 223 ~~~~vlv~~~r~~~---~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l 298 (403)
T 3ot5_A 223 DNRLILMTAHRREN---LG-EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNF 298 (403)
T ss_dssp TCEEEEECCCCHHH---HT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred CCCEEEEEeCcccc---cC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHH
Confidence 34677777664311 11 123455555443 33 3677765532 1 0 1134689999998743 34
Q ss_pred cccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHH
Q psy11555 318 LDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRA 397 (484)
Q Consensus 318 l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a 397 (484)
+ ..++++|+..|. ...||+++|+|+|++|-.+++.. +.+.|.|+.+.. +.++|.+++.++++|+..++++
T Consensus 299 ~--~~ad~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~~~~~m 368 (403)
T 3ot5_A 299 L--RKSYLVFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKESHDKM 368 (403)
T ss_dssp H--HHEEEEEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHHHHHHH
T ss_pred H--HhcCEEEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHHHHHHH
Confidence 4 679999998753 33699999999999976565543 347788988853 7899999999999999988888
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 398 EKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
.+.+..+.+ .++.++.++.|+..+..
T Consensus 369 ~~~~~~~g~--~~aa~rI~~~l~~~l~~ 394 (403)
T 3ot5_A 369 AQAANPYGD--GFAANRILAAIKSHFEE 394 (403)
T ss_dssp HHSCCTTCC--SCHHHHHHHHHHHHHTC
T ss_pred HhhcCcccC--CcHHHHHHHHHHHHhCC
Confidence 766555654 47888888888887754
No 33
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.01 E-value=3.8e-10 Score=109.94 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=88.3
Q ss_pred EEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-------CCCCcEEEecccCcc---cccccCceeEEE
Q psy11555 258 IYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------GKIDKILLKSWAPQR---DILDHPNVKVFI 327 (484)
Q Consensus 258 v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-------~~~~nv~~~~~~pq~---~ll~h~~~~~~I 327 (484)
+++..|+. .+.+....++++++.++.++++..++.... ...++|++.+|+|+. +++ .+++++|
T Consensus 164 ~i~~vG~~-----~~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~--~~adv~v 236 (342)
T 2iuy_A 164 FLLFMGRV-----SPHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLL--ASAHAVL 236 (342)
T ss_dssp CEEEESCC-----CGGGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHH--HHCSEEE
T ss_pred EEEEEecc-----ccccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHH--HhCCEEE
Confidence 45667877 345667788888877776766654432110 123799999999976 455 6778887
Q ss_pred ec--------------CCcchHHHHHhcCCceeeccCCCchHHHHHHHHH--cCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 328 SH--------------GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEK--AGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 328 th--------------gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~--~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.. |..+++.||+++|+|+|+.+..+ ....+++ .+.|..++ . +.+++.++|.++++
T Consensus 237 ~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~~~~~~g~~~~--~-d~~~l~~~i~~l~~-- 307 (342)
T 2iuy_A 237 AMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGC----LAEIVPSVGEVVGYGTD--F-APDEARRTLAGLPA-- 307 (342)
T ss_dssp ECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTT----HHHHGGGGEEECCSSSC--C-CHHHHHHHHHTSCC--
T ss_pred ECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCC----hHHHhcccCCCceEEcC--C-CHHHHHHHHHHHHH--
Confidence 32 22457999999999999977643 5666666 56777775 3 88999999999996
Q ss_pred HHHHHHHHHH
Q psy11555 392 SYKKRAEKVA 401 (484)
Q Consensus 392 ~~~~~a~~~~ 401 (484)
.+++++..
T Consensus 308 --~~~~~~~~ 315 (342)
T 2iuy_A 308 --SDEVRRAA 315 (342)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHH
Confidence 55555544
No 34
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.01 E-value=1e-08 Score=109.87 Aligned_cols=158 Identities=10% Similarity=0.009 Sum_probs=103.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCC-----cEEEEEecCCC--------------------CCCCCCcEEEe
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-----QRVIWKWEGEN--------------------MSGKIDKILLK 309 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~--------------------~~~~~~nv~~~ 309 (484)
+..++++.|.. .+.+.+..+++|+..+. .++++..++.. ..++.++|.+.
T Consensus 571 ~~~vIl~vGRl-----~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 571 KKPILFTMARL-----DRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp TSCEEEEECCC-----CTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CCeEEEEEccC-----cccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 46678888988 34566788888887764 35565554441 01246899999
Q ss_pred cccC----ccccccc-C-ceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHH
Q psy11555 310 SWAP----QRDILDH-P-NVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEET 379 (484)
Q Consensus 310 ~~~p----q~~ll~h-~-~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~ 379 (484)
++.+ +.++... . .+++||.. |-..++.||+++|+|+|+....+ ....+.+.+.|+.++.. +.++
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG----~~EiV~dg~~Gllv~p~--D~e~ 719 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVHGKSGFHIDPY--HGDQ 719 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBT----HHHHCCBTTTBEEECTT--SHHH
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCC----hHHHHccCCcEEEeCCC--CHHH
Confidence 8554 3454421 1 35778743 33468999999999999965443 55566666789999766 7899
Q ss_pred HHHHHHHHh----CCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 380 VLVALRTVL----GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 380 l~~ai~~~l----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++++|.+++ .|++.++++.+-+.....+..+....+..+ +.+.+
T Consensus 720 LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~l-l~lY~ 767 (816)
T 3s28_A 720 AADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRL-LTLTG 767 (816)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHH-HHHHH
Confidence 999997766 888887777776665442225544444443 33443
No 35
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.95 E-value=1.3e-08 Score=101.71 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=91.5
Q ss_pred CceEEEEeecceeccCCCChHHHHHHHHHHhc----C-CcEEEEEecCCCC--------------CCCCCcEEEecccC-
Q psy11555 254 VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----I-PQRVIWKWEGENM--------------SGKIDKILLKSWAP- 313 (484)
Q Consensus 254 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~----~-~~~~i~~~~~~~~--------------~~~~~nv~~~~~~p- 313 (484)
++..+++..|.... .+....+++++.. . +.++++..++... .+..++|.+.+|++
T Consensus 229 ~~~~~i~~vGrl~~-----~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~ 303 (416)
T 2x6q_A 229 PEKPIITQVSRFDP-----WKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIG 303 (416)
T ss_dssp TTSCEEEEECCCCT-----TSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGT
T ss_pred CCCcEEEEEecccc-----ccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCC
Confidence 34567777888732 2334444444443 3 3466666554210 12457999999876
Q ss_pred --cc---cccccCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHH
Q psy11555 314 --QR---DILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVAL 384 (484)
Q Consensus 314 --q~---~ll~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 384 (484)
+. +++ ..++++|... ..+++.||+++|+|+|+.+. ..+...+++.+.|..++ +.+++.++|
T Consensus 304 ~~~~~~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~----d~~~la~~i 373 (416)
T 2x6q_A 304 VHAREVNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR----DANEAVEVV 373 (416)
T ss_dssp CCHHHHHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES----SHHHHHHHH
T ss_pred CCHHHHHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC----CHHHHHHHH
Confidence 22 344 6788888654 34689999999999999764 34666666677899885 789999999
Q ss_pred HHHhCCHHHHHHHHHHHHH
Q psy11555 385 RTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 385 ~~~l~~~~~~~~a~~~~~~ 403 (484)
.++++|++.++++.+-+..
T Consensus 374 ~~ll~~~~~~~~~~~~a~~ 392 (416)
T 2x6q_A 374 LYLLKHPEVSKEMGAKAKE 392 (416)
T ss_dssp HHHHHCHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHH
Confidence 9999998877666655443
No 36
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.95 E-value=7.9e-10 Score=110.02 Aligned_cols=150 Identities=13% Similarity=0.122 Sum_probs=100.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCC-C-------CCCCCCcEEEecccCcc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGE-N-------MSGKIDKILLKSWAPQR---DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~-~-------~~~~~~nv~~~~~~pq~---~ll 318 (484)
++.++++.|-... .. +.++.+++|+..+ + .++++..+.+ . .....+++++.+++++. .++
T Consensus 230 ~~~vlv~~hR~~~---~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 230 KKLILVTGHRRES---FG-GGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp SEEEEEECSCBCC---CT-THHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEECCccc---ch-hHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 4677666532211 11 2256666666543 3 4677765421 1 11234689998887643 444
Q ss_pred ccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 319 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 319 ~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
..++++|+.+| |.+.||+++|+|+|+.+-.+++. .+.+.|.++.+.. +.++|.+++.++++|++.++++.
T Consensus 306 --~~ad~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~~~~~~m~ 375 (396)
T 3dzc_A 306 --DRAHIILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDPQAYQAMS 375 (396)
T ss_dssp --HHCSEEEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --HhcCEEEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCHHHHHHHh
Confidence 68999999987 55679999999999985555542 2456788877753 68999999999999999888887
Q ss_pred HHHHHHhCCCCChHHHHHHHHH
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIE 420 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie 420 (484)
+.+..+.+ .++.+++++.|+
T Consensus 376 ~~~~~~~~--~~aa~ri~~~l~ 395 (396)
T 3dzc_A 376 QAHNPYGD--GKACQRIADILA 395 (396)
T ss_dssp TSCCTTCC--SCHHHHHHHHHH
T ss_pred hccCCCcC--ChHHHHHHHHHh
Confidence 76655544 466777766654
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.86 E-value=4.9e-09 Score=103.63 Aligned_cols=164 Identities=16% Similarity=0.112 Sum_probs=108.3
Q ss_pred hHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcC----CcEEEEEecCC------CC---CCCCCcEEEeccc
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----PQRVIWKWEGE------NM---SGKIDKILLKSWA 312 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~------~~---~~~~~nv~~~~~~ 312 (484)
+.+-++-.+++.++++.|.... ....+.++.+++++.++ +..+++..++. .. ....+|+++.+.+
T Consensus 194 ~~~~lgl~~~~~iLvt~hr~e~--~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~l 271 (385)
T 4hwg_A 194 ILDKLSLTPKQYFLISSHREEN--VDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAF 271 (385)
T ss_dssp HHHHTTCCTTSEEEEEECCC-------CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCC
T ss_pred HHHHcCCCcCCEEEEEeCCchh--cCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 3444443335688888776521 12235566777776654 45677765431 11 1124688887766
Q ss_pred Ccc---cccccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 313 PQR---DILDHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 313 pq~---~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
+.. .++ ..++++|+-.|. .+.||.++|+|+|+++-..+-.. ..+.|.++.+.. +.++|.+++.++++
T Consensus 272 g~~~~~~l~--~~adlvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~~---d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 272 SFTDYVKLQ--MNAFCILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMSGF---KAERVLQAVKTITE 341 (385)
T ss_dssp CHHHHHHHH--HHCSEEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECCS---SHHHHHHHHHHHHT
T ss_pred CHHHHHHHH--HhCcEEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcCC---CHHHHHHHHHHHHh
Confidence 543 455 678999999875 57999999999999987554111 356788887753 78999999999999
Q ss_pred CHHHHHHHHHHHHHH-hCCCCChHHHHHHHHHHHH
Q psy11555 390 NPSYKKRAEKVARLF-QDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 390 ~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~ie~~~ 423 (484)
|+..++++.+.+..+ .+ .++.++.++.|+..+
T Consensus 342 d~~~~~~m~~~~~~~~g~--g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 342 EHDNNKRTQGLVPDYNEA--GLVSKKILRIVLSYV 374 (385)
T ss_dssp TCBTTBCCSCCCHHHHTC--CCHHHHHHHHHHHHH
T ss_pred ChHHHHHhhccCCCCCCC--ChHHHHHHHHHHHHh
Confidence 887655554444456 55 478888888887654
No 38
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.82 E-value=2.2e-08 Score=102.33 Aligned_cols=151 Identities=13% Similarity=0.075 Sum_probs=98.0
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC-----C----CCCCCcEE-EecccCcc---cccc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKIL-LKSWAPQR---DILD 319 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~-----~----~~~~~nv~-~~~~~pq~---~ll~ 319 (484)
..++++.|... +.+....+++|+..+ +.++++..+++. + ...+++|. +.++ +.. +++
T Consensus 291 ~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~- 363 (485)
T 1rzu_A 291 SPLFCVISRLT-----WQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQ- 363 (485)
T ss_dssp SCEEEEESCBS-----TTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHH-
T ss_pred CeEEEEEccCc-----cccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHH-
Confidence 45778888883 344556666665544 456666555421 0 11347887 6777 443 345
Q ss_pred cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc---------CcEEEecCCCCCHHHHHHHHHH
Q psy11555 320 HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA---------GFGVTLPYDQITEETVLVALRT 386 (484)
Q Consensus 320 h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~---------G~g~~l~~~~~~~~~l~~ai~~ 386 (484)
..++++|.. |..+++.||+++|+|+|+... ......+.+. +.|..++.. +.++|.++|.+
T Consensus 364 -~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ 436 (485)
T 1rzu_A 364 -AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFSPV--TLDGLKQAIRR 436 (485)
T ss_dssp -HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEESSC--SHHHHHHHHHH
T ss_pred -hcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeCCC--CHHHHHHHHHH
Confidence 678888843 335689999999999999654 3455555554 689999765 78999999999
Q ss_pred Hh---CCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 387 VL---GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 387 ~l---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
++ +|++.++++.+-+.. +..+. +..+.-++.+.+
T Consensus 437 ll~~~~~~~~~~~~~~~~~~---~~fs~-~~~~~~~~~~y~ 473 (485)
T 1rzu_A 437 TVRYYHDPKLWTQMQKLGMK---SDVSW-EKSAGLYAALYS 473 (485)
T ss_dssp HHHHHTCHHHHHHHHHHHHT---CCCBH-HHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHH---HhCCh-HHHHHHHHHHHH
Confidence 99 788877776655532 33554 444443444443
No 39
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.78 E-value=9.5e-09 Score=90.03 Aligned_cols=133 Identities=20% Similarity=0.259 Sum_probs=96.3
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC-cEEEEEecCCCCC-----------CCCCcEEEecccCcc---ccccc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP-QRVIWKWEGENMS-----------GKIDKILLKSWAPQR---DILDH 320 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~-~~~i~~~~~~~~~-----------~~~~nv~~~~~~pq~---~ll~h 320 (484)
..+++..|+.. +.+....+++++..++ .++++..++.... .+++||.+.+|+++. +++
T Consensus 23 ~~~i~~~G~~~-----~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~-- 95 (177)
T 2f9f_A 23 GDFWLSVNRIY-----PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY-- 95 (177)
T ss_dssp CSCEEEECCSS-----GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH--
T ss_pred CCEEEEEeccc-----cccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH--
Confidence 45667788873 4566788888888885 4666655443211 145699999999984 455
Q ss_pred CceeEEEe---cCCc-chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHH-HH
Q psy11555 321 PNVKVFIS---HGGF-LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSY-KK 395 (484)
Q Consensus 321 ~~~~~~It---hgG~-~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~-~~ 395 (484)
..++++|. +.|. .++.||+++|+|+|+.+. ..+...+++.+.|..+ .. +.+++.++|.++++|++. ++
T Consensus 96 ~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~~--d~~~l~~~i~~l~~~~~~~~~ 168 (177)
T 2f9f_A 96 SRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-NA--DVNEIIDAMKKVSKNPDKFKK 168 (177)
T ss_dssp HHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-CS--CHHHHHHHHHHHHHCTTTTHH
T ss_pred HhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-CC--CHHHHHHHHHHHHhCHHHHHH
Confidence 67888886 2333 489999999999999653 4556666667789888 44 789999999999988875 66
Q ss_pred HHHHHHH
Q psy11555 396 RAEKVAR 402 (484)
Q Consensus 396 ~a~~~~~ 402 (484)
++++.++
T Consensus 169 ~~~~~a~ 175 (177)
T 2f9f_A 169 DCFRRAK 175 (177)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666554
No 40
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.73 E-value=3.6e-07 Score=91.06 Aligned_cols=151 Identities=14% Similarity=0.133 Sum_probs=96.9
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCCC---------------CCCCCc-------EE
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGENM---------------SGKIDK-------IL 307 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~~---------------~~~~~n-------v~ 307 (484)
+..++++.|... +.+....+++|+..+ + .++++..++... .++.++ +.
T Consensus 183 ~~~~il~vGr~~-----~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNT-----ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSS-----GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCc-----hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceee
Confidence 467888889873 345556666665543 3 466665554321 114444 77
Q ss_pred EecccCcccccc-cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCc---------------E
Q psy11555 308 LKSWAPQRDILD-HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGF---------------G 367 (484)
Q Consensus 308 ~~~~~pq~~ll~-h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~---------------g 367 (484)
+.+|+|+.++.. ..+++++|.- |..+++.||+++|+|+|+... ......+.+... |
T Consensus 258 ~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 258 NRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGDCVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTTTSEEECCCEEEECTTTCS
T ss_pred ccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccCcccccccccccccccccC
Confidence 889999655431 2678888843 334589999999999999653 334444443332 5
Q ss_pred E--EecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCChHHHHHH
Q psy11555 368 V--TLPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQDRPMPPLDTAIY 417 (484)
Q Consensus 368 ~--~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 417 (484)
. .++.. +.+++.++| ++++|++.++++.+.+.....+..+....+..
T Consensus 334 ~~gl~~~~--d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~ 382 (413)
T 3oy2_A 334 IGGIEGII--DVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSD 382 (413)
T ss_dssp SCCEEEEC--CHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred cceeeCCC--CHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 5 66544 899999999 99999998888777776664333554443333
No 41
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.70 E-value=2.2e-08 Score=98.91 Aligned_cols=160 Identities=10% Similarity=0.091 Sum_probs=106.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhc----CC-cEEEEEecCCC-----C---CCCCCcEEEecccCcc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQ----IP-QRVIWKWEGEN-----M---SGKIDKILLKSWAPQR---DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~----~~-~~~i~~~~~~~-----~---~~~~~nv~~~~~~pq~---~ll 318 (484)
++.++++.|.... . .+.+..+++++.. .+ .++++..+.+. + ....++|.+.++++.. +++
T Consensus 205 ~~~vl~~~gr~~~---~-~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 205 KKMILVTGHRRES---F-GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp SEEEEEECCCBSS---C-CHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCCccc---c-chHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 4678888887631 1 1345556666544 33 46666444221 0 0123689998777653 445
Q ss_pred ccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 319 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 319 ~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
..+++||+.+|. .+.||+++|+|+|+.|..++.. .+.+.|.|+.++. +.++|.++|.++++|++.++++.
T Consensus 281 --~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~g~g~lv~~---d~~~la~~i~~ll~d~~~~~~~~ 350 (384)
T 1vgv_A 281 --NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTAGTVRLVGT---DKQRIVEEVTRLLKDENEYQAMS 350 (384)
T ss_dssp --HHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHHTSEEEECS---SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred --HhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhCCceEEeCC---CHHHHHHHHHHHHhChHHHhhhh
Confidence 789999999864 5889999999999998754432 2456679999964 78999999999999998877776
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHcCCCCC
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIEHVIRHGGGAH 430 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~ 430 (484)
+.++.+.. ....++.+..++.+++.-|..|
T Consensus 351 ~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 351 RAHNPYGD--GQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp SSCCTTCC--SCHHHHHHHHHHHTCCCC----
T ss_pred hccCCCcC--CCHHHHHHHHHHHHHHhhcccc
Confidence 65544433 4667777887777666544444
No 42
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.63 E-value=6.8e-08 Score=95.15 Aligned_cols=155 Identities=14% Similarity=0.113 Sum_probs=105.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCC-C-------CCCCCcEEEecccCcc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN-M-------SGKIDKILLKSWAPQR---DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~-~-------~~~~~nv~~~~~~pq~---~ll 318 (484)
++.|+++.|.... .+.+..+++|++.+ + .++++..+++. . ....++|++.++++.. +++
T Consensus 198 ~~~vl~~~gr~~~-----~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 198 GPYVTVTMHRREN-----WPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SCEEEECCCCGGG-----GGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCEEEEEeCcccc-----hHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 4567777775522 11345555655432 3 46666545321 0 0123589999666553 566
Q ss_pred ccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 319 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 319 ~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
..+++||+.+| |.+.||+++|+|+|+.|..+++.. +.+.|.|+.++ .+.++|.++|.++++|++.++++.
T Consensus 273 --~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~~~~~~~~ 342 (376)
T 1v4v_A 273 --RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKAGILKLAG---TDPEGVYRVVKGLLENPEELSRMR 342 (376)
T ss_dssp --HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHHTSEEECC---SCHHHHHHHHHHHHTCHHHHHHHH
T ss_pred --HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcCCceEECC---CCHHHHHHHHHHHHhChHhhhhhc
Confidence 78999999884 446699999999999887666654 34678898885 289999999999999998777777
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHcC
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIEHVIRHG 426 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie~~~~~~ 426 (484)
+.++.+.+ ..+.++.++.++.+++..
T Consensus 343 ~~~~~~~~--~~~~~~i~~~i~~~~~~~ 368 (376)
T 1v4v_A 343 KAKNPYGD--GKAGLMVARGVAWRLGLG 368 (376)
T ss_dssp HSCCSSCC--SCHHHHHHHHHHHHTTSS
T ss_pred ccCCCCCC--ChHHHHHHHHHHHHhccc
Confidence 64444433 467888888888877643
No 43
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.45 E-value=2.3e-05 Score=78.01 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=78.6
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHH-hcCCc-EEEEEecCC-CCCCCCCcEEEecccCcccccc-cCceeEEEec---
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAF-EQIPQ-RVIWKWEGE-NMSGKIDKILLKSWAPQRDILD-HPNVKVFISH--- 329 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~-~~~~~-~~i~~~~~~-~~~~~~~nv~~~~~~pq~~ll~-h~~~~~~Ith--- 329 (484)
.++++.|.... .+.+ +.++ +..+. ++++..++. ...++.+||.+.+++|+.++.. ...++++|.-
T Consensus 223 ~~i~~vGrl~~-----~Kg~---~~~l~~~~~~~~l~ivG~g~~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 223 IHAVAVGSMLF-----DPEF---FVVASKAFPQVTFHVIGSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp EEEEEECCTTB-----CHHH---HHHHHHHCTTEEEEEESCSSCCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred cEEEEEecccc-----ccCH---HHHHHHhCCCeEEEEEeCchHHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCc
Confidence 67788888832 2322 3333 33443 555543332 1123568999999998765321 1668888742
Q ss_pred -CCcchHHHHH-------hcCCceeeccCCCchHHHHHHHHHcCcEEE-ecCCCCCHHHHHHHHHHHhCCHH
Q psy11555 330 -GGFLGTTEAL-------YSGVPIIGIPMFGDQKANIRVVEKAGFGVT-LPYDQITEETVLVALRTVLGNPS 392 (484)
Q Consensus 330 -gG~~s~~Eal-------~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~-l~~~~~~~~~l~~ai~~~l~~~~ 392 (484)
|..+++.||+ ++|+|+|+... +.....|.. ++.+ +.++|.++|.++++|+.
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred ccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 3346789999 99999999765 455567888 8766 78999999999998876
No 44
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.31 E-value=1e-06 Score=86.53 Aligned_cols=153 Identities=14% Similarity=0.162 Sum_probs=101.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC----C-cEEEEEecCCC--------CCCCCCcEEEecccCcc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI----P-QRVIWKWEGEN--------MSGKIDKILLKSWAPQR---DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~----~-~~~i~~~~~~~--------~~~~~~nv~~~~~~pq~---~ll 318 (484)
++.++++.|.... . .+.+..+++++..+ + .++++..+.+. .....++|++.+++++. +++
T Consensus 205 ~~~vl~~~gr~~~---~-~K~~~~li~a~~~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 205 NRLVLMTAHRREN---L-GEPMRNMFRAIKRLVDKHEDVQVVYPVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp SEEEEEECCCGGG---T-THHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCeEEEEeccccc---c-hhHHHHHHHHHHHHHhhCCCeEEEEeCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 4667777776521 1 14466677766543 3 35554323211 00123689998887765 444
Q ss_pred ccCceeEEEecCCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 319 DHPNVKVFISHGGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 319 ~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
..++++|+.+| +.+.||+++|+|+|+.+..++. ..+.+.|.|+.++. +.++|.++|.++++|++.++++.
T Consensus 281 --~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~~---d~~~la~~i~~ll~~~~~~~~~~ 350 (375)
T 3beo_A 281 --ARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAGT---DEETIFSLADELLSDKEAHDKMS 350 (375)
T ss_dssp --HTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECCS---CHHHHHHHHHHHHHCHHHHHHHC
T ss_pred --HhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcCC---CHHHHHHHHHHHHhChHhHhhhh
Confidence 67999999875 4589999999999998654433 23456789988863 78999999999999998877766
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
+.++.+.+ ....++.++.++.++
T Consensus 351 ~~~~~~~~--~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 351 KASNPYGD--GRASERIVEAILKHF 373 (375)
T ss_dssp CCCCTTCC--SCHHHHHHHHHHHHT
T ss_pred hcCCCCCC--CcHHHHHHHHHHHHh
Confidence 55544433 356777777666554
No 45
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.20 E-value=3.7e-06 Score=74.58 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=88.4
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcC------C-cEEEEEecCC--CCC-------CCCCcEEE-ecccCcc---
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI------P-QRVIWKWEGE--NMS-------GKIDKILL-KSWAPQR--- 315 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~------~-~~~i~~~~~~--~~~-------~~~~nv~~-~~~~pq~--- 315 (484)
..+++..|+... +.+....+++++..+ + .++++..++. ... ..+ +|++ .+++++.
T Consensus 36 ~~~i~~~G~~~~----~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~ 110 (200)
T 2bfw_A 36 GVTFMFIGRFDR----GQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVR 110 (200)
T ss_dssp CEEEEEESCBCS----SSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHH
T ss_pred CCEEEEeecccc----ccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHH
Confidence 347778888740 223344444544433 2 3555544332 110 122 8999 9999854
Q ss_pred cccccCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC-C
Q psy11555 316 DILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG-N 390 (484)
Q Consensus 316 ~ll~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~-~ 390 (484)
+++ ..++++|... ...++.||+++|+|+|+... ......+ ..+.|..++.. +.+++.++|.++++ |
T Consensus 111 ~~~--~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~~~--~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 111 ELY--GSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVKAG--DPGELANAILKALELS 181 (200)
T ss_dssp HHH--TTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEECTT--CHHHHHHHHHHHHHCC
T ss_pred HHH--HHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEecCC--CHHHHHHHHHHHHhcC
Confidence 445 6788888543 24579999999999998654 3455666 66789988765 78999999999999 9
Q ss_pred HHHHHHHHHHHHH
Q psy11555 391 PSYKKRAEKVARL 403 (484)
Q Consensus 391 ~~~~~~a~~~~~~ 403 (484)
+..++++.+-+..
T Consensus 182 ~~~~~~~~~~a~~ 194 (200)
T 2bfw_A 182 RSDLSKFRENCKK 194 (200)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8877666655544
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.11 E-value=4.1e-06 Score=71.91 Aligned_cols=135 Identities=10% Similarity=0.127 Sum_probs=82.8
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCC---c-EEEEEecCCCCC-------CCCCcEEEecccCcccccc-cCce
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIP---Q-RVIWKWEGENMS-------GKIDKILLKSWAPQRDILD-HPNV 323 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~---~-~~i~~~~~~~~~-------~~~~nv~~~~~~pq~~ll~-h~~~ 323 (484)
+++++..|+. .+.+....+++++..+. . ++++...+.... ....++.+ +|+|+.++.. ..++
T Consensus 2 ~~~i~~~G~~-----~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRY-----SNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCC-----STTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEecc-----chhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 5677888887 33455777777777763 2 444433322111 12237888 9998754321 2678
Q ss_pred eEEEec----CCcchHHHHHhcCC-ceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 324 KVFISH----GGFLGTTEALYSGV-PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 324 ~~~Ith----gG~~s~~Eal~~gv-P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
+++|.. |...++.||+++|+ |+|+....+.- ...+.+.+. .++.. +.+++.++|.++++|++.++++.
T Consensus 76 dv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~---~~~~~~~~~--~~~~~--~~~~l~~~i~~l~~~~~~~~~~~ 148 (166)
T 3qhp_A 76 TLYVHAANVESEAIACLEAISVGIVPVIANSPLSAT---RQFALDERS--LFEPN--NAKDLSAKIDWWLENKLERERMQ 148 (166)
T ss_dssp SEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGG---GGGCSSGGG--EECTT--CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCch---hhhccCCce--EEcCC--CHHHHHHHHHHHHhCHHHHHHHH
Confidence 888863 33458999999996 99994321111 111112222 45444 78999999999999987666665
Q ss_pred HHHHH
Q psy11555 399 KVARL 403 (484)
Q Consensus 399 ~~~~~ 403 (484)
+-+..
T Consensus 149 ~~~~~ 153 (166)
T 3qhp_A 149 NEYAK 153 (166)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 47
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.00 E-value=7.1e-05 Score=77.76 Aligned_cols=168 Identities=11% Similarity=0.188 Sum_probs=102.7
Q ss_pred hhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEec-CCC----------CCCCC-CcEEEecccCcccc
Q psy11555 250 LDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWE-GEN----------MSGKI-DKILLKSWAPQRDI 317 (484)
Q Consensus 250 l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~-~~~----------~~~~~-~nv~~~~~~pq~~l 317 (484)
++..++.+|+ ..|.... +....+++.+....++.+.-.++..| ++. ..++. ++|++.+++|+.++
T Consensus 371 ~~~~~~~~v~-~~g~~~~--K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~ 447 (568)
T 2vsy_A 371 CGLPEQGVVL-CCFNNSY--KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQY 447 (568)
T ss_dssp GTCCTTSCEE-EECCCGG--GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHH
T ss_pred cCCCCCCEEE-EeCCccc--cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHH
Confidence 3333334444 5566643 34455566665555555553344444 321 11234 89999999986543
Q ss_pred cc-cCceeEEEe---cCCcchHHHHHhcCCceeeccCCCc-hHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHH
Q psy11555 318 LD-HPNVKVFIS---HGGFLGTTEALYSGVPIIGIPMFGD-QKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPS 392 (484)
Q Consensus 318 l~-h~~~~~~It---hgG~~s~~Eal~~gvP~i~~P~~~d-Q~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~ 392 (484)
.. ...+++||. .|+.+++.||+++|+|+|++|-..- -..-+..+...|+...+.. +.+++.+++.++++|++
T Consensus 448 ~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~~la~~i~~l~~~~~ 524 (568)
T 2vsy_A 448 LARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDAAFVAKAVALASDPA 524 (568)
T ss_dssp HHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHHHCHH
T ss_pred HHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHHHHHHHHHHHhcCHH
Confidence 21 267888883 2566789999999999999764211 1112455666677766643 78999999999999998
Q ss_pred HHHHHHHHHHHHh--CCCCChHHHHHHHHHHHHH
Q psy11555 393 YKKRAEKVARLFQ--DRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 393 ~~~~a~~~~~~~~--~~~~~~~~~~~~~ie~~~~ 424 (484)
.++++++-++... .+..+ .+..+.-++.+.+
T Consensus 525 ~~~~~~~~~~~~~~~~~~f~-~~~~~~~~~~~y~ 557 (568)
T 2vsy_A 525 ALTALHARVDVLRRASGVFH-MDGFADDFGALLQ 557 (568)
T ss_dssp HHHHHHHHHHHHHHHSSTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCCC-HHHHHHHHHHHHH
Confidence 8888776665544 33244 4444444444443
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.99 E-value=6.2e-05 Score=80.34 Aligned_cols=173 Identities=11% Similarity=0.188 Sum_probs=120.7
Q ss_pred hHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC------------CCCCCcEEEecccC
Q psy11555 246 IKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM------------SGKIDKILLKSWAP 313 (484)
Q Consensus 246 l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~------------~~~~~nv~~~~~~p 313 (484)
.++..+-+++.+||.+|.... +...+.++...+.+++.|..++|....... .-.++.+.+.+..|
T Consensus 513 ~R~~~gLp~~~v~f~~fN~~~---Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~ 589 (723)
T 4gyw_A 513 TRSQYGLPEDAIVYCNFNQLY---KIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAP 589 (723)
T ss_dssp EGGGGTCCTTSEEEECCSCGG---GCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCC
T ss_pred chhhcCCCCCCEEEEeCCccc---cCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCC
Confidence 344455555678888887774 488999999999999999999988765321 11357899999998
Q ss_pred ccccc-ccCceeEEEe---cCCcchHHHHHhcCCceeeccC-CCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 314 QRDIL-DHPNVKVFIS---HGGFLGTTEALYSGVPIIGIPM-FGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 314 q~~ll-~h~~~~~~It---hgG~~s~~Eal~~gvP~i~~P~-~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
..+-| .+..+|+++. .+|.+|+.|||++|||+|.+|- ..--..-+..+...|+...+-. +.++-.+..-++-
T Consensus 590 ~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~---~~~~Y~~~a~~la 666 (723)
T 4gyw_A 590 KEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK---NRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS---SHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC---CHHHHHHHHHHHh
Confidence 77655 3577899974 7888999999999999999983 1222334566777788766643 5666555555677
Q ss_pred CCHHHHHHHHH-HHHHHhCCCCChHHHHHHHHHHHHH
Q psy11555 389 GNPSYKKRAEK-VARLFQDRPMPPLDTAIYWIEHVIR 424 (484)
Q Consensus 389 ~~~~~~~~a~~-~~~~~~~~~~~~~~~~~~~ie~~~~ 424 (484)
+|++.+.+.++ +.+.....|.--.+..+.-+|.+++
T Consensus 667 ~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~ 703 (723)
T 4gyw_A 667 TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYL 703 (723)
T ss_dssp HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHH
Confidence 78876666653 4444444444445666777777665
No 49
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.86 E-value=6.6e-05 Score=76.32 Aligned_cols=151 Identities=11% Similarity=0.071 Sum_probs=98.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC-----C----CCCCCcEE-EecccCcc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN-----M----SGKIDKIL-LKSWAPQR---DIL 318 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~-----~----~~~~~nv~-~~~~~pq~---~ll 318 (484)
+..++++.|... +.+....+++|+..+ +.++++..+++. + .+.++++. +.++ +.. +++
T Consensus 291 ~~~~i~~vGrl~-----~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~ 364 (485)
T 2qzs_A 291 KVPLFAVVSRLT-----SQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIM 364 (485)
T ss_dssp TSCEEEEEEEES-----GGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHH
T ss_pred CCeEEEEeccCc-----cccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHH
Confidence 356777888873 345556666666554 456666554421 1 11346886 7777 433 445
Q ss_pred ccCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHc---------CcEEEecCCCCCHHHHHHHHH
Q psy11555 319 DHPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA---------GFGVTLPYDQITEETVLVALR 385 (484)
Q Consensus 319 ~h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~---------G~g~~l~~~~~~~~~l~~ai~ 385 (484)
..++++|.. |..+++.||+++|+|+|+... ......+.+. +.|..++.. +.+++.++|.
T Consensus 365 --~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~ 436 (485)
T 2qzs_A 365 --GGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIR 436 (485)
T ss_dssp --HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHH
T ss_pred --HhCCEEEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCC--CHHHHHHHHH
Confidence 678888843 335689999999999999754 3455555554 689999765 7899999999
Q ss_pred HHh---CCHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH
Q psy11555 386 TVL---GNPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVI 423 (484)
Q Consensus 386 ~~l---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~ 423 (484)
+++ +|++.++++.+-+.. +..+....+..+ +.+.
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~-~~ly 473 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSY-RELY 473 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHH-HHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHH-HHHH
Confidence 999 788877777665542 235544444443 3344
No 50
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.84 E-value=2.9e-05 Score=76.28 Aligned_cols=94 Identities=20% Similarity=0.224 Sum_probs=66.4
Q ss_pred CcEEEecccCcc-cccccCceeEEEec-----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCH
Q psy11555 304 DKILLKSWAPQR-DILDHPNVKVFISH-----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITE 377 (484)
Q Consensus 304 ~nv~~~~~~pq~-~ll~h~~~~~~Ith-----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~ 377 (484)
.++.+.++..+. +++ ..+++++.- +|..++.||+++|+|+|+-|..++.......+.+.|.++.. + +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~--~--d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEV--K--NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEEC--C--SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEe--C--CH
Confidence 356666654432 344 678886642 24478999999999999877777666666666677887766 3 68
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH
Q psy11555 378 ETVLVALRTVLGNPSYKKRAEKVARLF 404 (484)
Q Consensus 378 ~~l~~ai~~~l~~~~~~~~a~~~~~~~ 404 (484)
++|.++|.++++| +.++++.+.++..
T Consensus 334 ~~La~ai~~ll~d-~~r~~mg~~ar~~ 359 (374)
T 2xci_A 334 TELVTKLTELLSV-KKEIKVEEKSREI 359 (374)
T ss_dssp HHHHHHHHHHHHS-CCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhH-HHHHHHHHHHHHH
Confidence 9999999999988 7555555444433
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.70 E-value=0.00015 Score=69.98 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=86.0
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccC-ceeEEEec--CCc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHP-NVKVFISH--GGF 332 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~-~~~~~Ith--gG~ 332 (484)
+.+++..|+... .+.+. .+ ..+.+++...++... ..+ ||.+.+|+|..++...= +++.-+.. +..
T Consensus 178 ~~~i~yaG~l~k-----~~~L~----~l-~~~~~f~ivG~G~~~-~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~ 245 (339)
T 3rhz_A 178 KREIHFPGNPER-----FSFVK----EW-KYDIPLKVYTWQNVE-LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKD 245 (339)
T ss_dssp EEEEEECSCTTT-----CGGGG----GC-CCSSCEEEEESCCCC-CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGG
T ss_pred CcEEEEeCCcch-----hhHHH----hC-CCCCeEEEEeCCccc-CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCch
Confidence 566778888842 11111 11 123465554444332 455 99999999998765322 23333322 221
Q ss_pred ---------chHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC--HHHHHHHHHHH
Q psy11555 333 ---------LGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN--PSYKKRAEKVA 401 (484)
Q Consensus 333 ---------~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~--~~~~~~a~~~~ 401 (484)
+-+.|+|++|+|+|+.+ ...++..+++.|+|+.++ +.+++.++|.++..+ ..+++++++.+
T Consensus 246 ~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~~----~~~e~~~~i~~l~~~~~~~m~~na~~~a 317 (339)
T 3rhz_A 246 KEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIVK----DVEEAIMKVKNVNEDEYIELVKNVRSFN 317 (339)
T ss_dssp HHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEES----SHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred hHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEeC----CHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 34889999999999855 345778899999999996 468899999887533 24677788887
Q ss_pred HHHhCC
Q psy11555 402 RLFQDR 407 (484)
Q Consensus 402 ~~~~~~ 407 (484)
+.++..
T Consensus 318 ~~~~~~ 323 (339)
T 3rhz_A 318 PILRKG 323 (339)
T ss_dssp HHHHTT
T ss_pred HHhhcc
Confidence 777764
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.66 E-value=0.00022 Score=73.18 Aligned_cols=140 Identities=9% Similarity=0.029 Sum_probs=98.3
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEE--ecCC-CCC----------CCCCcEEEecccCccccc-ccC
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK--WEGE-NMS----------GKIDKILLKSWAPQRDIL-DHP 321 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~--~~~~-~~~----------~~~~nv~~~~~~pq~~ll-~h~ 321 (484)
.++|.+|+.. .+...+.++...+.+++.|..++|. .+.. ... ++.+.+.+.+.+|..+.+ .+.
T Consensus 441 ~v~Fg~fn~~---~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 441 VVNIGIASTT---MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp EEEEEEEECS---TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred eEEEEECCcc---ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 5677777665 4578899999999999999887774 3321 111 134688899999877644 246
Q ss_pred ceeEEEe---cCCcchHHHHHhcCCceeeccCCC-chHHHHHHHHHcCcEE-EecCCCCCHHHHHHHHHHHhCCHHHHHH
Q psy11555 322 NVKVFIS---HGGFLGTTEALYSGVPIIGIPMFG-DQKANIRVVEKAGFGV-TLPYDQITEETVLVALRTVLGNPSYKKR 396 (484)
Q Consensus 322 ~~~~~It---hgG~~s~~Eal~~gvP~i~~P~~~-dQ~~na~~~~~~G~g~-~l~~~~~~~~~l~~ai~~~l~~~~~~~~ 396 (484)
.+|+|+. .+|.+|+.||+++|||+|+.+--. .-..-+..+...|+.. .+.. +.++..+...++.+|++.+++
T Consensus 518 ~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D~~~l~~ 594 (631)
T 3q3e_A 518 NCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAENHQERLE 594 (631)
T ss_dssp TCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHCHHHHHH
T ss_pred cCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCCHHHHHH
Confidence 7888873 377789999999999999987432 1122334456678764 2322 678888888899999988777
Q ss_pred HHHHH
Q psy11555 397 AEKVA 401 (484)
Q Consensus 397 a~~~~ 401 (484)
+++-.
T Consensus 595 LR~~L 599 (631)
T 3q3e_A 595 LRRYI 599 (631)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 53
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.48 E-value=8.7e-05 Score=73.87 Aligned_cols=88 Identities=15% Similarity=-0.030 Sum_probs=62.2
Q ss_pred CCCcEEEecccCcccccc-cCceeEEEec----CCcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCC
Q psy11555 302 KIDKILLKSWAPQRDILD-HPNVKVFISH----GGFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 376 (484)
Q Consensus 302 ~~~nv~~~~~~pq~~ll~-h~~~~~~Ith----gG~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~ 376 (484)
..++|.+.+++|+.++.. ...+++|+.. |=.+++.|||++|+|+|+ -..+ ....+++.+.|+.+++. +
T Consensus 293 ~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~~~G~lv~~~--d 365 (413)
T 2x0d_A 293 KGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWHSNIVSLEQL--N 365 (413)
T ss_dssp TTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTBTTEEEESSC--S
T ss_pred CcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcCCCEEEeCCC--C
Confidence 356899999998775432 2678898853 223568999999999998 3322 12334455689989766 7
Q ss_pred HHHHHHHHHHHhCCHHHHHH
Q psy11555 377 EETVLVALRTVLGNPSYKKR 396 (484)
Q Consensus 377 ~~~l~~ai~~~l~~~~~~~~ 396 (484)
+++|+++|.++++|++.+++
T Consensus 366 ~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 366 PENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHcCHHHHHH
Confidence 89999999999988876665
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=96.46 E-value=0.0059 Score=62.69 Aligned_cols=155 Identities=12% Similarity=0.110 Sum_probs=95.2
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcC---CcEEEEEecCCC---------CCCCCCcEEEecccCccc---ccc
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQI---PQRVIWKWEGEN---------MSGKIDKILLKSWAPQRD---ILD 319 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~---------~~~~~~nv~~~~~~pq~~---ll~ 319 (484)
+.++++..|... +.+.+..+++|+.++ +.++++...++. ....+.++.+....++.+ ++
T Consensus 326 ~~p~i~~vgRl~-----~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~- 399 (536)
T 3vue_A 326 KIPLIAFIGRLE-----EQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM- 399 (536)
T ss_dssp TSCEEEEECCBS-----GGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH-
T ss_pred CCcEEEEEeecc-----ccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH-
Confidence 456778888883 456677777777654 335655544421 112567888888877643 34
Q ss_pred cCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCC--------CCCHHHHHHHHHHH
Q psy11555 320 HPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYD--------QITEETVLVALRTV 387 (484)
Q Consensus 320 h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~--------~~~~~~l~~ai~~~ 387 (484)
..+++|+.-. -..+++||+++|+|+|+.... .....+.+...|...... ..+.+.|.++|+++
T Consensus 400 -~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 400 -AGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp -HHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred -HhhheeecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 6788888542 235899999999999996543 355666666677654322 12578899999887
Q ss_pred hC---CHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHc
Q psy11555 388 LG---NPSYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRH 425 (484)
Q Consensus 388 l~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~ 425 (484)
++ ++.+++.+++. ++. ..+-...|..+ +.+.+.
T Consensus 475 l~~~~~~~~~~~~~~a---m~~-~fSW~~~A~~y-~~ly~~ 510 (536)
T 3vue_A 475 IKVVGTPAYEEMVRNC---MNQ-DLSWKGPAKNW-ENVLLG 510 (536)
T ss_dssp HHHTTSHHHHHHHHHH---HHS-CCSSHHHHHHH-HHHHHT
T ss_pred HHhcCcHHHHHHHHHH---HHh-cCCHHHHHHHH-HHHHHH
Confidence 63 45554433322 222 25544444444 445543
No 55
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=94.60 E-value=0.28 Score=49.37 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=59.1
Q ss_pred EE-EecccCcccccc-cCceeEEEecC---Cc-chHHHHHhcCC-----ceeeccCCC--chHHHHHHHHHcCcEEEecC
Q psy11555 306 IL-LKSWAPQRDILD-HPNVKVFISHG---GF-LGTTEALYSGV-----PIIGIPMFG--DQKANIRVVEKAGFGVTLPY 372 (484)
Q Consensus 306 v~-~~~~~pq~~ll~-h~~~~~~Ithg---G~-~s~~Eal~~gv-----P~i~~P~~~--dQ~~na~~~~~~G~g~~l~~ 372 (484)
++ +.+.+++.++.+ ...+++|+.-. |. .++.||+++|+ |+|+-...+ ++. ..|+.+++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l---------~~g~lv~p 403 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL---------TSALIVNP 403 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC---------TTSEEECT
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh---------CCeEEECC
Confidence 45 457888776543 36788888533 44 47899999998 777655433 222 25788877
Q ss_pred CCCCHHHHHHHHHHHhCC-HHHH-HHHHHHHHHHhC
Q psy11555 373 DQITEETVLVALRTVLGN-PSYK-KRAEKVARLFQD 406 (484)
Q Consensus 373 ~~~~~~~l~~ai~~~l~~-~~~~-~~a~~~~~~~~~ 406 (484)
. +.++++++|.++|++ +..+ +..++..+..+.
T Consensus 404 ~--d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~ 437 (482)
T 1uqt_A 404 Y--DRDEVAAALDRALTMSLAERISRHAEMLDVIVK 437 (482)
T ss_dssp T--CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 6 789999999999985 4433 334444444444
No 56
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=92.63 E-value=0.91 Score=45.54 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=63.7
Q ss_pred cEEEecccCcccccc-cCceeEEEec---CCcc-hHHHHHhcC---CceeeccCCCchHHHHHHHHHcCcEEEecCCCCC
Q psy11555 305 KILLKSWAPQRDILD-HPNVKVFISH---GGFL-GTTEALYSG---VPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQIT 376 (484)
Q Consensus 305 nv~~~~~~pq~~ll~-h~~~~~~Ith---gG~~-s~~Eal~~g---vP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~ 376 (484)
.|++.+.+|+.++.+ ...+++|+.- =|.| +..||+++| .|+|+--+.+ .+..+. ..|+.+++. +
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~--~~allVnP~--D 424 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG--EYCRSVNPF--D 424 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG--GGSEEECTT--B
T ss_pred CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC--CCEEEECCC--C
Confidence 578888888765543 2567787743 4665 469999996 6666655443 222221 258899877 7
Q ss_pred HHHHHHHHHHHhCCH--HHHHHHHHHHHHHhC
Q psy11555 377 EETVLVALRTVLGNP--SYKKRAEKVARLFQD 406 (484)
Q Consensus 377 ~~~l~~ai~~~l~~~--~~~~~a~~~~~~~~~ 406 (484)
.++++++|.++|+++ +-+++++++.+..+.
T Consensus 425 ~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~ 456 (496)
T 3t5t_A 425 LVEQAEAISAALAAGPRQRAEAAARRRDAARP 456 (496)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 899999999999764 455666666666655
No 57
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=92.53 E-value=0.36 Score=50.15 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=55.1
Q ss_pred ecccCccc---------ccccCceeEEEecC----CcchHHHHHhcCCceeeccCCCchHHHHHHHHHc-------CcEE
Q psy11555 309 KSWAPQRD---------ILDHPNVKVFISHG----GFLGTTEALYSGVPIIGIPMFGDQKANIRVVEKA-------GFGV 368 (484)
Q Consensus 309 ~~~~pq~~---------ll~h~~~~~~Ithg----G~~s~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~-------G~g~ 368 (484)
-.|++..+ ++ ..+++||... -..+++||+++|+|+|+.-..+ -...+.+. +.|+
T Consensus 498 P~~L~~~d~lf~~d~~~~~--~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~ 571 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFV--RGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGI 571 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHH--HHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTE
T ss_pred ccccCCCCccchhHHHHHH--hhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceE
Confidence 46777654 34 5788998654 2358999999999999965543 22333321 3576
Q ss_pred Eec-CCCCCHHHHHHHHHHHh----C-CHHHHHHHHHHHHHHhC
Q psy11555 369 TLP-YDQITEETVLVALRTVL----G-NPSYKKRAEKVARLFQD 406 (484)
Q Consensus 369 ~l~-~~~~~~~~l~~ai~~~l----~-~~~~~~~a~~~~~~~~~ 406 (484)
.+. .+..+.+++.++|.+.+ . ++..+.++++.++....
T Consensus 572 lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~ 615 (725)
T 3nb0_A 572 YIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD 615 (725)
T ss_dssp EEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 663 33345555555555444 2 55556666655544443
No 58
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=80.91 E-value=20 Score=30.20 Aligned_cols=128 Identities=14% Similarity=0.155 Sum_probs=65.8
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC--CCCC-CCCcEEEecccCcc-ccccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE--NMSG-KIDKILLKSWAPQR-DILDH 320 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~--~~~~-~~~nv~~~~~~pq~-~ll~h 320 (484)
++-++|... +..+||-|... -.+....++..+.+-+++-+.... +..+ .-....+.+.+++. .++.
T Consensus 36 ~lg~~La~~--g~~lVsGGg~~-------Gim~aa~~gAl~~gG~tigVlP~~~~~~~~~~~~~~i~~~~~~~Rk~~m~- 105 (176)
T 2iz6_A 36 ELGKQIATH--GWILLTGGRSL-------GVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINA- 105 (176)
T ss_dssp HHHHHHHHT--TCEEEEECSSS-------SHHHHHHHHHHHTTCCEEEEECC-----CCTTCSEEEECCCCSSSCCCCG-
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHhHHHHHHHHHcCCEEEEEeCchhhhhhccCCceeEEcCCHHHHHHHHH-
Confidence 444455544 56677777631 234555555544554444444421 1111 11234556666653 4443
Q ss_pred CceeEE-EecCCcchH---HHHHhcCCceeeccCCCchHHHHHHHHHcCcE-EEecCCCCCHHHHHHHHHHHh
Q psy11555 321 PNVKVF-ISHGGFLGT---TEALYSGVPIIGIPMFGDQKANIRVVEKAGFG-VTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 321 ~~~~~~-IthgG~~s~---~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g-~~l~~~~~~~~~l~~ai~~~l 388 (484)
..+++| +--||.||+ .|++.+++|++++|.+. .....+...-.. +.+. + +++++.+.+.+.+
T Consensus 106 ~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~-~--~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 106 LSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA-A--DVAGAIAAVKQLL 172 (176)
T ss_dssp GGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE-S--SHHHHHHHHHHHH
T ss_pred HhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc-C--CHHHHHHHHHHHH
Confidence 334444 467888875 45577999999999832 111222222221 2221 2 6777777776655
No 59
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=75.01 E-value=3.8 Score=40.67 Aligned_cols=34 Identities=3% Similarity=-0.130 Sum_probs=22.3
Q ss_pred CCccEEEEcccchhh-HHHHH-HHhCCCEEEEeCCC
Q psy11555 96 KKYDLIITEVFNTDC-FLGFV-YKFKVPYIAVSAAH 129 (484)
Q Consensus 96 ~~~DlvI~d~~~~~~-~~~~A-~~l~iP~i~~~~~~ 129 (484)
.+||+|++....... +..++ ...++|+|...+..
T Consensus 128 ~~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~ 163 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNL 163 (485)
T ss_dssp CCCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCT
T ss_pred CCCCEEEeeccchhHHHHHHhhccCCCCEEEEecCc
Confidence 689999998653222 22234 46799998766654
No 60
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=71.72 E-value=3.8 Score=39.02 Aligned_cols=131 Identities=18% Similarity=0.245 Sum_probs=76.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-------CCCCc-EEEecccC---cccccccCce
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-------GKIDK-ILLKSWAP---QRDILDHPNV 323 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-------~~~~n-v~~~~~~p---q~~ll~h~~~ 323 (484)
++.|.+.-|+.......+.+...++++.+.+.+.++++..++++.. ..+.+ +.+.+-.+ -.+++ .++
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali--~~a 262 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAM--NRC 262 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHH--HTC
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHH--HhC
Confidence 5788888898765667888888888888876677877643332211 12222 22323222 23455 679
Q ss_pred eEEEecCCcchHHHHHhcCCceeec--cCC-------Cch------HHHHHHHHH---cCc--EEEecCCCCCHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSGVPIIGI--PMF-------GDQ------KANIRVVEK---AGF--GVTLPYDQITEETVLVA 383 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~gvP~i~~--P~~-------~dQ------~~na~~~~~---~G~--g~~l~~~~~~~~~l~~a 383 (484)
+++|+.-. |.++=|.+.|+|+|++ |.. +++ ...+. +.. ..+ |-.--.++++++++.++
T Consensus 263 ~~~i~~Ds-G~~HlAaa~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~a 340 (349)
T 3tov_A 263 NLLITNDS-GPMHVGISQGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIKA 340 (349)
T ss_dssp SEEEEESS-HHHHHHHTTTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHHH
T ss_pred CEEEECCC-CHHHHHHhcCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHHH
Confidence 99999843 3444488899999986 221 111 11122 222 111 10111246789999999
Q ss_pred HHHHhC
Q psy11555 384 LRTVLG 389 (484)
Q Consensus 384 i~~~l~ 389 (484)
++++|+
T Consensus 341 ~~~lL~ 346 (349)
T 3tov_A 341 AETLLL 346 (349)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988873
No 61
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=71.65 E-value=2.7 Score=39.46 Aligned_cols=126 Identities=13% Similarity=0.146 Sum_probs=75.1
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC-C------CCCCCCcEEEecccC--c-ccccccCcee
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE-N------MSGKIDKILLKSWAP--Q-RDILDHPNVK 324 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~-~------~~~~~~nv~~~~~~p--q-~~ll~h~~~~ 324 (484)
++.|.+.-|+.......+.+.+.++++.+.+.+.++++.++++ + .....+++.+.+-.+ + ..++ .+++
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali--~~a~ 255 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVL--AGAK 255 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHH--HTCS
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHH--HhCC
Confidence 4678888888765567888888888888766667776654431 1 111112443333222 2 3455 6799
Q ss_pred EEEec-CCcchHHHHHhcCCceeec--cCCCchHHHHHHHHHcCc-EEEec-----CCCCCHHHHHHHHHHHhCC
Q psy11555 325 VFISH-GGFLGTTEALYSGVPIIGI--PMFGDQKANIRVVEKAGF-GVTLP-----YDQITEETVLVALRTVLGN 390 (484)
Q Consensus 325 ~~Ith-gG~~s~~Eal~~gvP~i~~--P~~~dQ~~na~~~~~~G~-g~~l~-----~~~~~~~~l~~ai~~~l~~ 390 (484)
++|+. .|. ++=|.+.|+|+|++ |... ..++ =.|- ...+. .++++++++.+++.++|++
T Consensus 256 l~I~~DSG~--~HlAaa~g~P~v~lfg~t~p--~~~~----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 FVVSVDTGL--SHLTAALDRPNITVYGPTDP--GLIG----GYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEEEESSHH--HHHHHHTTCCEEEEESSSCH--HHHC----CCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred EEEecCCcH--HHHHHHcCCCEEEEECCCCh--hhcC----CCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 99999 543 33366699999987 3211 0100 0111 11111 2467999999999999864
No 62
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=70.21 E-value=6.8 Score=36.87 Aligned_cols=92 Identities=12% Similarity=0.075 Sum_probs=58.9
Q ss_pred CceEEEEeecc-eeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCC-------CCCC----CcE-EEecccC--c-ccc
Q psy11555 254 VNGVIYFSMGS-IIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENM-------SGKI----DKI-LLKSWAP--Q-RDI 317 (484)
Q Consensus 254 ~~~~v~vs~Gs-~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~-------~~~~----~nv-~~~~~~p--q-~~l 317 (484)
+++.|.+.-|+ .......+.+.+..+++.+.+.+.++++..++++. ...+ .++ .+.+..+ + .++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~al 258 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVIL 258 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHH
Confidence 35788888888 32335688888888888887667787775443221 1111 133 2333322 1 355
Q ss_pred cccCceeEEEecCCcchHHHHHhcCCceeec
Q psy11555 318 LDHPNVKVFISHGGFLGTTEALYSGVPIIGI 348 (484)
Q Consensus 318 l~h~~~~~~IthgG~~s~~Eal~~gvP~i~~ 348 (484)
+ .+++++|+.-+ |.++-|.+.|+|+|++
T Consensus 259 i--~~a~l~I~~Ds-g~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 259 I--AACKAIVTNDS-GLMHVAAALNRPLVAL 286 (348)
T ss_dssp H--HTSSEEEEESS-HHHHHHHHTTCCEEEE
T ss_pred H--HhCCEEEecCC-HHHHHHHHcCCCEEEE
Confidence 6 67999999842 4567788999999986
No 63
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=63.10 E-value=31 Score=29.59 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=50.9
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEe--cccC-cccccccC
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLK--SWAP-QRDILDHP 321 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~--~~~p-q~~ll~h~ 321 (484)
++-+.|.+. +..+|+ |.. .-.+.+..++....+-+++-+...+........+.+. ..++ .+.++. .
T Consensus 49 ~lg~~LA~~--G~~vVs-Gg~-------~GiM~aa~~gAl~~GG~~iGVlP~e~~~~~~~~~~~~~~~~f~~Rk~~m~-~ 117 (195)
T 1rcu_A 49 ELGRTLAKK--GYLVFN-GGR-------DGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLL-R 117 (195)
T ss_dssp HHHHHHHHT--TCEEEE-CCS-------SHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHH-T
T ss_pred HHHHHHHHC--CCEEEe-CCH-------HHHHHHHHHHHHHcCCcEEEEeCCcccCCCCcceeeecCCCHHHHHHHHH-H
Confidence 344445443 566666 433 1355666666555554555555543222222233333 2344 344443 2
Q ss_pred cee-EEEecCCcchH---HHHHhcCCceeeccC
Q psy11555 322 NVK-VFISHGGFLGT---TEALYSGVPIIGIPM 350 (484)
Q Consensus 322 ~~~-~~IthgG~~s~---~Eal~~gvP~i~~P~ 350 (484)
.++ .++.-||.||+ .|++.+++|+++++.
T Consensus 118 ~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 118 NADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp TCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred hCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 333 44567888885 456779999999964
No 64
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=57.47 E-value=3.8 Score=37.17 Aligned_cols=54 Identities=19% Similarity=0.247 Sum_probs=41.3
Q ss_pred CceeEEEecCCcchHHHHHhc---CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 321 PNVKVFISHGGFLGTTEALYS---GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~---gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
..++++|+-||=||+.+++.. ++|+++++. + -.|... ++.++++.++++.+++.
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G------------~~Gfl~---~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-G------------RLGFLT---SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-S------------SCCSSC---CBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C------------CCCccC---cCCHHHHHHHHHHHHcC
Confidence 468999999999999999877 899999974 3 123332 24578888999888854
No 65
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=55.51 E-value=5.1 Score=36.64 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=39.9
Q ss_pred CceeEEEecCCcchHHHHHhc------CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 321 PNVKVFISHGGFLGTTEALYS------GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~------gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
..++++|+-||=||+.+++.. ++|++++|... .|. + .++.++++.++++.+++.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~-------------lgf-l--~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH-------------LGF-Y--ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS-------------CCS-S--CCBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC-------------CCc-C--CcCCHHHHHHHHHHHHcC
Confidence 467899999999999998765 89999998621 232 1 233567788888888754
No 66
>2hac_A T-cell surface glycoprotein CD3 zeta chain; transmembrane, alpha helix, membrane protein; NMR {Homo sapiens}
Probab=53.62 E-value=16 Score=21.05 Aligned_cols=19 Identities=26% Similarity=0.329 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy11555 444 ILLDVIIALILLIAAMVWS 462 (484)
Q Consensus 444 ~~lDv~~~~~~~~~~~~~~ 462 (484)
|-||.++++..+++.+++.
T Consensus 6 YiLDgiL~iYgii~T~Ly~ 24 (33)
T 2hac_A 6 YLLDGILFIYGVILTALFL 24 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHH
Confidence 6799998877666555443
No 67
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=49.07 E-value=80 Score=27.46 Aligned_cols=129 Identities=11% Similarity=0.074 Sum_probs=67.0
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecC-----CCCCCCCCcEEEecccCc-cccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG-----ENMSGKIDKILLKSWAPQ-RDIL 318 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~-----~~~~~~~~nv~~~~~~pq-~~ll 318 (484)
++-+.+... +..+|+-|... -.+.+..++....+-+++=.... +...+...++.+.+.++. ..++
T Consensus 32 ~lg~~LA~~--g~~lV~GGg~~-------GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~ 102 (216)
T 1ydh_A 32 ELGNELVKR--KIDLVYGGGSV-------GLMGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAM 102 (216)
T ss_dssp HHHHHHHHT--TCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSCCSEEEEESSHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------cHhHHHHHHHHHcCCcEEEEechhcCccccccCCCCcccccCCHHHHHHHH
Confidence 344445544 45566665541 34666666665555444444332 111111233555555553 3333
Q ss_pred ccCceeEE-EecCCcchHHHHH---------hcCCceeeccC--CCchHHH-HHHHHHcCcE-------EEecCCCCCHH
Q psy11555 319 DHPNVKVF-ISHGGFLGTTEAL---------YSGVPIIGIPM--FGDQKAN-IRVVEKAGFG-------VTLPYDQITEE 378 (484)
Q Consensus 319 ~h~~~~~~-IthgG~~s~~Eal---------~~gvP~i~~P~--~~dQ~~n-a~~~~~~G~g-------~~l~~~~~~~~ 378 (484)
. ..+++| +-.||.||+-|.. .+++|++++-. +.|...+ ...+.+.|.- +.+- + +++
T Consensus 103 ~-~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~~~~~~~~-d--~~e 178 (216)
T 1ydh_A 103 A-QEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSA-P--TAK 178 (216)
T ss_dssp H-HHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHHHTTEEEE-S--SHH
T ss_pred H-HhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHHcCeEEEe-C--CHH
Confidence 2 334454 5688899987776 47999999853 4443332 2455555531 1221 2 567
Q ss_pred HHHHHHHH
Q psy11555 379 TVLVALRT 386 (484)
Q Consensus 379 ~l~~ai~~ 386 (484)
++.+.|.+
T Consensus 179 e~~~~l~~ 186 (216)
T 1ydh_A 179 ELMEKMEE 186 (216)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766654
No 68
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=45.93 E-value=1e+02 Score=24.31 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=59.4
Q ss_pred CChHHHHHHHHHHhcCCcEEEEEec-CCC----CCCCCCcEEEecc-cCcccccccCceeEEEecCCcchHHHHHh----
Q psy11555 271 FPSDKRKAFLRAFEQIPQRVIWKWE-GEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---- 340 (484)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~i~~~~-~~~----~~~~~~nv~~~~~-~pq~~ll~h~~~~~~IthgG~~s~~Eal~---- 340 (484)
......+.+...++..++.++.... +.+ ....+..+.+.+| +|..+ |. .+.+.+.
T Consensus 20 D~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~md--------------G~-el~~~ir~~~~ 84 (134)
T 3to5_A 20 DFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQ--------------GI-DLLKNIRADEE 84 (134)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSC--------------HH-HHHHHHHHSTT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCC--------------HH-HHHHHHHhCCC
Confidence 4445555566667777765443332 211 1112345666665 45443 11 3444443
Q ss_pred -cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 341 -SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 341 -~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
..+|+|++--..+. .......+.|+--.+. +.++.++|.++|+++++
T Consensus 85 ~~~ipvI~lTa~~~~-~~~~~~~~~Ga~~yl~-KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 85 LKHLPVLMITAEAKR-EQIIEAAQAGVNGYIV-KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTTCCEEEEESSCCH-HHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHCC
T ss_pred CCCCeEEEEECCCCH-HHHHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHh
Confidence 46898887655544 4556666778765554 46799999999999873
No 69
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=45.14 E-value=1.4e+02 Score=25.24 Aligned_cols=111 Identities=14% Similarity=0.133 Sum_probs=56.9
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----CC-CCCCCcEEEecccCc-cccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NM-SGKIDKILLKSWAPQ-RDIL 318 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~-~~~~~nv~~~~~~pq-~~ll 318 (484)
++-+.+... +..+|+-|... -.+.+..++....+-+++=..... +. .+..++..+...++. +.++
T Consensus 24 ~lg~~La~~--g~~lV~GGg~~-------GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~~~~~~~~~~Rk~~~ 94 (191)
T 1t35_A 24 ELGVYMAEQ--GIGLVYGGSRV-------GLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKM 94 (191)
T ss_dssp HHHHHHHHT--TCEEEECCCCS-------HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSEEEEESHHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------cHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCccccCCCHHHHHHHH
Confidence 344445444 56666665431 346666666655555544444321 11 111233444555554 3444
Q ss_pred ccCceeEE-EecCCcchHHH---HH------hcCCceeeccC--CCchHH-HHHHHHHcC
Q psy11555 319 DHPNVKVF-ISHGGFLGTTE---AL------YSGVPIIGIPM--FGDQKA-NIRVVEKAG 365 (484)
Q Consensus 319 ~h~~~~~~-IthgG~~s~~E---al------~~gvP~i~~P~--~~dQ~~-na~~~~~~G 365 (484)
. ..+++| +-.||.||+-| ++ .+++|++++.. +.|... ....+.+.|
T Consensus 95 ~-~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~G 153 (191)
T 1t35_A 95 S-ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEG 153 (191)
T ss_dssp H-HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTT
T ss_pred H-HHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCC
Confidence 3 334444 57788888655 55 37899999854 333322 223455554
No 70
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=44.97 E-value=9.3 Score=30.11 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=25.6
Q ss_pred HHHHhhcCCCccEEEEcccch-hhHHHHHHH---hCCCEEEEeCC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT-DCFLGFVYK---FKVPYIAVSAA 128 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~-~~~~~~A~~---l~iP~i~~~~~ 128 (484)
-.+.++ +.+||+||.|..+. .-|..+++. .++|+|.++..
T Consensus 45 Al~~~~-~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa~ 88 (123)
T 2lpm_A 45 ALDIAR-KGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATGY 88 (123)
T ss_dssp HHHHHH-HCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCTT
T ss_pred HHHHHH-hCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEecC
Confidence 345565 67899999997642 123444444 47998776654
No 71
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=44.20 E-value=8.2 Score=37.62 Aligned_cols=17 Identities=6% Similarity=-0.054 Sum_probs=15.0
Q ss_pred ChhhhcCCeEEEEeecC
Q psy11555 1 MGLTDHGHVVDILSHFP 17 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~~ 17 (484)
++|+++||+|+|+|+..
T Consensus 73 ~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 73 EQFDNKKFKKRIILTDA 89 (413)
T ss_dssp TTSCTTTCEEEEEESSC
T ss_pred HHHHHcCCceEEEEecC
Confidence 57999999999999863
No 72
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=44.14 E-value=21 Score=33.71 Aligned_cols=38 Identities=16% Similarity=0.004 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCccEEEEccc--chhhHHHHHHHhCCCEEEE
Q psy11555 87 AALDLLHSSKKYDLIITEVF--NTDCFLGFVYKFKVPYIAV 125 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~--~~~~~~~~A~~l~iP~i~~ 125 (484)
.+.++++ ..+||+|++... ....+..+|...|+|++.+
T Consensus 82 ~l~~~l~-~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~ 121 (376)
T 1v4v_A 82 QAARALK-EMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHV 121 (376)
T ss_dssp HHHHHHH-HTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHH-HcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEE
Confidence 3667776 779999999432 1223345778889998754
No 73
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=43.12 E-value=48 Score=26.24 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=30.8
Q ss_pred cCCceeeccCCCchHHHHHHHHHcC-c-EEEecCCCCCHHHHHHHHHHHhCCHH
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAG-F-GVTLPYDQITEETVLVALRTVLGNPS 392 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G-~-g~~l~~~~~~~~~l~~ai~~~l~~~~ 392 (484)
..+|+|++--..+ ........+.| + +... +.++.++|.++|+.++....
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~~l~--kP~~~~~L~~~i~~~~~~~~ 128 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNRGKISRFLL--KPWEDEDVFKVVEKGLQLAF 128 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHTTCCSEEEE--SSCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhccchheeee--CCCCHHHHHHHHHHHHHHHH
Confidence 3678887644333 33444555555 5 4444 35689999999999884433
No 74
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=42.75 E-value=18 Score=36.37 Aligned_cols=35 Identities=9% Similarity=0.003 Sum_probs=26.6
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.+.++ ..++|++|..+ ....+|+++|||++.++
T Consensus 363 el~~~i~-~~~pDl~ig~~----~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIA-RVEPAAIFGTQ----MERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHH-HHCCSEEEECH----HHHHHHHHHTCCEEECS
T ss_pred HHHHHHH-hcCCCEEEecc----chHHHHHhcCCCeEecc
Confidence 4566666 66899999873 35567899999998765
No 75
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=42.00 E-value=1.2e+02 Score=23.67 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=34.5
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHH
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKK 395 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~ 395 (484)
..+|+|++--..+ ......+.+.|+--.+. +.++.++|.++|+.++.....+.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~L~~~i~~~~~~~~~~~ 126 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFIA-KPFAADRLVQSARRAEEKRRLVM 126 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEEe-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 4788888744433 34445556677654543 46689999999999985444433
No 76
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=40.29 E-value=56 Score=28.05 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=50.6
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecC----CCCC-CCCCcEEEecccCc-cccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG----ENMS-GKIDKILLKSWAPQ-RDIL 318 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~----~~~~-~~~~nv~~~~~~pq-~~ll 318 (484)
++-+++... +..+|+-|+.. -.+.+..++....+-+++=.... .+.+ ..-+...+.+.+.. ..++
T Consensus 44 ~lg~~La~~--g~~lV~GGG~~-------GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m 114 (199)
T 3qua_A 44 EVGSSIAAR--GWTLVSGGGNV-------SAMGAVAQAARAKGGHTVGVIPKALVHRELADVDAAELIVTDTMRERKREM 114 (199)
T ss_dssp HHHHHHHHT--TCEEEECCBCS-------HHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTTSSEEEEESSHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEeCchhhhccccCCCCCeeEEcCCHHHHHHHH
Confidence 344455544 45556655431 35666777666665554444332 1111 11234455555443 3333
Q ss_pred ccCceeEEE-ecCCcchHHHHHh---------cCCceeecc
Q psy11555 319 DHPNVKVFI-SHGGFLGTTEALY---------SGVPIIGIP 349 (484)
Q Consensus 319 ~h~~~~~~I-thgG~~s~~Eal~---------~gvP~i~~P 349 (484)
. ..+++|| -.||.||+-|... +++|++.+-
T Consensus 115 ~-~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 115 E-HRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp H-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred H-HhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 3 3455554 6777898777643 689999874
No 77
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=40.17 E-value=1.2e+02 Score=23.12 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 342 GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 342 gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
.+|+|++--..+.. ......+.|+--.+. +.++.++|.++|++++...
T Consensus 78 ~~pii~~t~~~~~~-~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 78 TLPILMLTAQGDIS-AKIAGFEAGANDYLA-KPFEPQELVYRVKNILART 125 (136)
T ss_dssp TCCEEEEECTTCHH-HHHHHHHHTCSEEEE-TTCCHHHHHHHHHHHHHC-
T ss_pred CccEEEEecCCCHH-HHHHHHhcCcceEEe-CCCCHHHHHHHHHHHHhcc
Confidence 67888775544443 344455566544443 4678999999999988543
No 78
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=39.71 E-value=54 Score=24.72 Aligned_cols=43 Identities=23% Similarity=0.233 Sum_probs=27.6
Q ss_pred HHHHhhcCCCccEEEEcccch-hhHHHHHHHh-------CCCEEEEeCCCCc
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT-DCFLGFVYKF-------KVPYIAVSAAHII 131 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~-~~~~~~A~~l-------~iP~i~~~~~~~~ 131 (484)
..+.++ ..+||+||.|..+. .-+..+.+.+ ++|+|.++.....
T Consensus 38 al~~l~-~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~ 88 (122)
T 3gl9_A 38 ALEKLS-EFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGE 88 (122)
T ss_dssp HHHHHT-TBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSH
T ss_pred HHHHHH-hcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCch
Confidence 445565 67899999997542 1244444433 5899888876543
No 79
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=39.58 E-value=32 Score=27.31 Aligned_cols=43 Identities=14% Similarity=0.262 Sum_probs=28.2
Q ss_pred HHHhhcCCCccEEEEcccch-hhHHHHHHHh-------CCCEEEEeCCCCch
Q psy11555 89 LDLLHSSKKYDLIITEVFNT-DCFLGFVYKF-------KVPYIAVSAAHIIP 132 (484)
Q Consensus 89 ~~~l~~~~~~DlvI~d~~~~-~~~~~~A~~l-------~iP~i~~~~~~~~~ 132 (484)
.+.++ +.+||+||.|..+. .-|..+++.+ ++|+|.+++.....
T Consensus 50 l~~~~-~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~ 100 (134)
T 3to5_A 50 LPMLK-KGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKRE 100 (134)
T ss_dssp HHHHH-HHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHH
T ss_pred HHHHH-hCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHH
Confidence 34554 56899999998642 2345555543 58998888766443
No 80
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=39.08 E-value=51 Score=22.75 Aligned_cols=33 Identities=18% Similarity=0.040 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 440 WWQYILLDVIIALILLIAAMVWSIQWLVRYALI 472 (484)
Q Consensus 440 ~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
+|.|..|-+-.++++.+++++-++..+.+++..
T Consensus 10 ~YDY~tLRiGGLifA~vLfi~GI~iilS~KckC 42 (72)
T 2jo1_A 10 TYDYQSLQIGGLVIAGILFILGILIVLSRRCRC 42 (72)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHhhccchHHHHHHHHHHHHHHHcCcccc
Confidence 467888888877777666666666555555533
No 81
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=37.54 E-value=11 Score=38.22 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=14.4
Q ss_pred ChhhhcCCeEEEEeec
Q psy11555 1 MGLTDHGHVVDILSHF 16 (484)
Q Consensus 1 ~~L~~rGH~Vtvvt~~ 16 (484)
++|+++||+|+|++|.
T Consensus 37 ~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 37 PAMAANGHRVMVISPR 52 (536)
T ss_dssp HHHHTTTCEEEEEEEC
T ss_pred HHHHHcCCeEEEEecC
Confidence 4799999999999984
No 82
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=37.03 E-value=1.4e+02 Score=22.82 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=55.0
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEecCCC----CCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHH---hcCCc
Q psy11555 272 PSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEAL---YSGVP 344 (484)
Q Consensus 272 ~~~~~~~~~~a~~~~~~~~i~~~~~~~----~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal---~~gvP 344 (484)
.......+...++..++.+.......+ +......+.+.+++|..+ |. .+.+.+ ...+|
T Consensus 13 ~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~~~~--------------g~-~~~~~l~~~~~~~p 77 (142)
T 2qxy_A 13 SRITFLAVKNALEKDGFNVIWAKNEQEAFTFLRREKIDLVFVDVFEGEE--------------SL-NLIRRIREEFPDTK 77 (142)
T ss_dssp CHHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTTSCCSEEEEECTTTHH--------------HH-HHHHHHHHHCTTCE
T ss_pred CHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhccCCCEEEEeCCCCCc--------------HH-HHHHHHHHHCCCCC
Confidence 345566666777777777664332211 122233444444432211 11 122222 23688
Q ss_pred eeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 345 IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 345 ~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
+|++--..+ ......+.+.|+--.+. +.++.++|.++|++++...
T Consensus 78 ii~ls~~~~-~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 78 VAVLSAYVD-KDLIINSVKAGAVDYIL-KPFRLDYLLERVKKIISST 122 (142)
T ss_dssp EEEEESCCC-HHHHHHHHHHTCSCEEE-SSCCHHHHHHHHHHHHHC-
T ss_pred EEEEECCCC-HHHHHHHHHCCcceeEe-CCCCHHHHHHHHHHHHhhc
Confidence 888754444 33445555666544443 3668999999999988543
No 83
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=36.43 E-value=48 Score=22.67 Aligned_cols=31 Identities=6% Similarity=-0.070 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11555 440 WWQYILLDVIIALILLIAAMVWSIQWLVRYA 470 (484)
Q Consensus 440 ~~~~~~lDv~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
+|.|..|-+-.++++.+++++-++..+.+++
T Consensus 11 ~YDY~tLRigGLifA~vLfi~GI~iilS~kc 41 (67)
T 2jp3_A 11 YYDWESLQLGGLIFGGLLCIAGIALALSGKC 41 (67)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred ccchHHheecchhhHHHHHHHHHHHHHcCcc
Confidence 4778888888777766666665555455544
No 84
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=36.33 E-value=1.4e+02 Score=22.68 Aligned_cols=104 Identities=12% Similarity=0.097 Sum_probs=56.4
Q ss_pred CChHHHHHHHHHHhcCCcEEEEEecCC----CCCCCCCcEEEecc-cCc--ccccccCceeEEEecCCcchHHHHHh---
Q psy11555 271 FPSDKRKAFLRAFEQIPQRVIWKWEGE----NMSGKIDKILLKSW-APQ--RDILDHPNVKVFISHGGFLGTTEALY--- 340 (484)
Q Consensus 271 ~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~~~~~~nv~~~~~-~pq--~~ll~h~~~~~~IthgG~~s~~Eal~--- 340 (484)
........+...++..++.+....... .+...+..+.+.++ +|. .+ |. .+.+.+.
T Consensus 14 d~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~--------------g~-~~~~~l~~~~ 78 (136)
T 3kto_A 14 HQKDARAALSKLLSPLDVTIQCFASAESFMRQQISDDAIGMIIEAHLEDKKDS--------------GI-ELLETLVKRG 78 (136)
T ss_dssp SCHHHHHHHHHHHTTSSSEEEEESSHHHHTTSCCCTTEEEEEEETTGGGBTTH--------------HH-HHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEeCcCCCCCcc--------------HH-HHHHHHHhCC
Confidence 344556667777777777776543321 12222233333332 222 11 11 2233332
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..+|+|++--..+. ..+....+.|+--.+. +.++.++|.++|++++...
T Consensus 79 ~~~~ii~~s~~~~~-~~~~~~~~~ga~~~l~-KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 79 FHLPTIVMASSSDI-PTAVRAMRASAADFIE-KPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp CCCCEEEEESSCCH-HHHHHHHHTTCSEEEE-SSBCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCH-HHHHHHHHcChHHhee-CCCCHHHHHHHHHHHHhcc
Confidence 36788877554444 3344555667655554 4578999999999988543
No 85
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=35.40 E-value=1.5e+02 Score=22.63 Aligned_cols=53 Identities=11% Similarity=0.001 Sum_probs=33.2
Q ss_pred hcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHH
Q psy11555 340 YSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYK 394 (484)
Q Consensus 340 ~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 394 (484)
...+|+|++--..+. .....+.+.|+--.+. +.++.++|.++|++++....+.
T Consensus 79 ~~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~~~ 131 (140)
T 3lua_A 79 TANTPVIIATKSDNP-GYRHAALKFKVSDYIL-KPYPTKRLENSVRSVLKICQRF 131 (140)
T ss_dssp GTTCCEEEEESCCCH-HHHHHHHHSCCSEEEE-SSCCTTHHHHHHHHHHCC----
T ss_pred cCCCCEEEEeCCCCH-HHHHHHHHcCCCEEEE-CCCCHHHHHHHHHHHHHhcccc
Confidence 347888887554444 3445555667554543 3568899999999999765443
No 86
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=35.37 E-value=1.9e+02 Score=23.88 Aligned_cols=138 Identities=12% Similarity=0.109 Sum_probs=71.1
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcchH
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGT 335 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~ 335 (484)
+.|-|-+||. ...+..+...+.++.++..+-..+-+ ....|+. ..+|..+ +....+++||.-+|.-.-
T Consensus 6 p~V~IimgS~-----SD~~v~~~a~~~l~~~gi~~ev~V~S--aHRtp~~--l~~~~~~---~~~~g~~ViIa~AG~aa~ 73 (166)
T 3oow_A 6 VQVGVIMGSK-----SDWSTMKECCDILDNLGIGYECEVVS--AHRTPDK--MFDYAET---AKERGLKVIIAGAGGAAH 73 (166)
T ss_dssp EEEEEEESSG-----GGHHHHHHHHHHHHHTTCEEEEEECC--TTTCHHH--HHHHHHH---TTTTTCCEEEEEECSSCC
T ss_pred CeEEEEECcH-----HhHHHHHHHHHHHHHcCCCEEEEEEc--CcCCHHH--HHHHHHH---HHhCCCcEEEEECCcchh
Confidence 5677778887 23577888888888887644333222 1111111 1111111 112346889987775433
Q ss_pred HHHH---hcCCceeeccCCCchH--HHH-HHHHHc--CcEEE-ecCC---CCCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy11555 336 TEAL---YSGVPIIGIPMFGDQK--ANI-RVVEKA--GFGVT-LPYD---QITEETVLVALRTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 336 ~Eal---~~gvP~i~~P~~~dQ~--~na-~~~~~~--G~g~~-l~~~---~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~ 403 (484)
+-.+ ..-+|+|++|...... ..+ --+.+. |+++. +..+ -.+..-+...|.. +.|+.++++.+..++.
T Consensus 74 LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~~l~~kl~~~r~~ 152 (166)
T 3oow_A 74 LPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQ-HTDINIAKALAEFRAE 152 (166)
T ss_dssp HHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGCHHHHHHHHHHHHH
T ss_pred hHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 2222 2358999999843211 111 112222 44443 3232 1223333333332 4688898888887766
Q ss_pred HhC
Q psy11555 404 FQD 406 (484)
Q Consensus 404 ~~~ 406 (484)
+++
T Consensus 153 ~~~ 155 (166)
T 3oow_A 153 QTR 155 (166)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 87
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=35.34 E-value=12 Score=36.14 Aligned_cols=54 Identities=11% Similarity=0.186 Sum_probs=38.8
Q ss_pred CceeEEEecCCcchHHHHHhc----CC-ceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 321 PNVKVFISHGGFLGTTEALYS----GV-PIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~----gv-P~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
..++++|+-||=||+..|+.. ++ |+++++... +|... +++.+++.+++++++++
T Consensus 113 ~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G~-------------lGFLt---~~~~~~~~~al~~il~g 171 (388)
T 3afo_A 113 NRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGT-------------LGFLS---PFDFKEHKKVFQEVISS 171 (388)
T ss_dssp HHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECSS-------------CCSSC---CEEGGGHHHHHHHHHTT
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECCC-------------cccCC---cCChHHHHHHHHHHhcC
Confidence 468999999999999998654 57 799987431 23222 23457788888888754
No 88
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=35.09 E-value=48 Score=25.59 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=30.8
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCH
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNP 391 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~ 391 (484)
..+|+|++--..+...-...+.+.|+--.+. +.++.++|.++|++++...
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPLAVSTWLE-KPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTTCCCEEEC-SSCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhcCCCEEEe-CCCCHHHHHHHHHHHHHhc
Confidence 3678887654443322222444556554554 4578999999999998543
No 89
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=34.88 E-value=25 Score=37.01 Aligned_cols=139 Identities=9% Similarity=0.031 Sum_probs=84.4
Q ss_pred HHHHHHHHhcCCcEEEEEecC---C--CCCCCCCcEE-EecccCcccccccCceeEEEecCCcchHHHHHhcCCceeecc
Q psy11555 276 RKAFLRAFEQIPQRVIWKWEG---E--NMSGKIDKIL-LKSWAPQRDILDHPNVKVFISHGGFLGTTEALYSGVPIIGIP 349 (484)
Q Consensus 276 ~~~~~~a~~~~~~~~i~~~~~---~--~~~~~~~nv~-~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~gvP~i~~P 349 (484)
++.+.+.+.. ++.++.+.-. . ......+.+. +.++.+-.+++ ..+|+.||=-. ..+.|.+..++|+|...
T Consensus 566 ~~~l~~~l~~-~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~~di~~ll--~~aD~lITDyS-Sv~fD~~~l~kPiif~~ 641 (729)
T 3l7i_A 566 LDNLYKELGD-DYVILLRMHYLISNALDLSGYENFAIDVSNYNDVSELF--LISDCLITDYS-SVMFDYGILKRPQFFFA 641 (729)
T ss_dssp HHHHHHHHTT-TEEEEECCCHHHHTTCCCTTCTTTEEECTTCSCHHHHH--HTCSEEEESSC-THHHHHGGGCCCEEEEC
T ss_pred HHHHHHHcCC-CeEEEEecCcchhccccccccCCcEEeCCCCcCHHHHH--HHhCEEEeech-HHHHhHHhhCCCEEEec
Confidence 4555555542 4455554322 1 1122333333 33344446777 67999999875 47899999999999886
Q ss_pred CCCchHHHHHHHHHcCcEEEecCC-------CCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHhC-CCCChHHHHHHHHH
Q psy11555 350 MFGDQKANIRVVEKAGFGVTLPYD-------QITEETVLVALRTVLG-NPSYKKRAEKVARLFQD-RPMPPLDTAIYWIE 420 (484)
Q Consensus 350 ~~~dQ~~na~~~~~~G~g~~l~~~-------~~~~~~l~~ai~~~l~-~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~ie 420 (484)
.-.|+..+ . --|...+.. --+.++|.++|.+... +..|+++.++..+.+-. ..-++.+++++.|.
T Consensus 642 ~D~~~Y~~-----~-~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~ 715 (729)
T 3l7i_A 642 YDIDKYDK-----G-LRGFYMNYMEDLPGPIYTEPYGLAKELKNLDKVQQQYQEKIDAFYDRFCSVDNGKASQYIGDLIH 715 (729)
T ss_dssp TTTTTTTS-----S-CCSBSSCTTSSSSSCEESSHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHH
T ss_pred CCHHHHhh-----c-cCCcccChhHhCCCCeECCHHHHHHHHhhhhccchhHHHHHHHHHHHhCCccCChHHHHHHHHHH
Confidence 65444322 0 022233221 1278999999988775 35678888888887753 22467788777776
Q ss_pred HHHH
Q psy11555 421 HVIR 424 (484)
Q Consensus 421 ~~~~ 424 (484)
...+
T Consensus 716 ~~~~ 719 (729)
T 3l7i_A 716 KDIK 719 (729)
T ss_dssp HHHH
T ss_pred hcCc
Confidence 5444
No 90
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=34.56 E-value=18 Score=33.28 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEecC-CCCCCCCCcEEEecccCcccccccCceeEEEecCCcchHHHHHhc----CCceeec
Q psy11555 274 DKRKAFLRAFEQIPQRVIWKWEG-ENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLGTTEALYS----GVPIIGI 348 (484)
Q Consensus 274 ~~~~~~~~a~~~~~~~~i~~~~~-~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s~~Eal~~----gvP~i~~ 348 (484)
+..+.+.+.+.+.+..+.+.... +... .+. . ......++- ..++++|+-||=||+.|++.. ++|++++
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~~~~~-~~~-~---~~~~~~~~~--~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI 93 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIAHELQ-LKN-V---PTGTLAEIG--QQADLAVVVGGDGNMLGAARTLARYDINVIGI 93 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHHHHTT-CSS-C---CEECHHHHH--HHCSEEEECSCHHHHHHHHHHHTTSSCEEEEB
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhcc-ccc-c---cccchhhcc--cCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEE
Confidence 45677777777777765543211 0000 000 0 000111111 468999999999999999843 7899999
Q ss_pred cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 349 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 349 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
|... .|...+ +.++++.++++.+++.
T Consensus 94 ~~Gt-------------~gfla~---~~~~~~~~al~~i~~g 119 (292)
T 2an1_A 94 NRGN-------------LGFLTD---LDPDNALQQLSDVLEG 119 (292)
T ss_dssp CSSS-------------CCSSCC---BCTTSHHHHHHHHHTT
T ss_pred ECCC-------------cccCCc---CCHHHHHHHHHHHHcC
Confidence 8421 222221 2345677778777754
No 91
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=33.93 E-value=56 Score=28.51 Aligned_cols=94 Identities=15% Similarity=0.062 Sum_probs=47.9
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEE---ecCCCCCC-CCCcEEEecccCc-ccccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWK---WEGENMSG-KIDKILLKSWAPQ-RDILD 319 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~---~~~~~~~~-~~~nv~~~~~~pq-~~ll~ 319 (484)
++-+.+... +..+|+-|.. -.+.+..++....+-+++-+ +..++..+ ..+.....+.+++ +.++.
T Consensus 60 ~lg~~La~~--g~~lVsGGg~--------GiM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~~t~~~~~~~f~~Rk~~m~ 129 (217)
T 1wek_A 60 RLGRALAEA--GFGVVTGGGP--------GVMEAVNRGAYEAGGVSVGLNIELPHEQKPNPYQTHALSLRYFFVRKVLFV 129 (217)
T ss_dssp HHHHHHHHH--TCEEEECSCS--------HHHHHHHHHHHHTTCCEEEEEECCTTCCCCCSCCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEeCChh--------hHHHHHHHHHHHcCCCEEEEeeCCcchhhccccCCcCcccCCHHHHHHHHH
Confidence 344444443 5667776653 34566666554444433332 32222111 1122233445554 33443
Q ss_pred cCceeEE-EecCCcchHHHHH---h-------cCCceeecc
Q psy11555 320 HPNVKVF-ISHGGFLGTTEAL---Y-------SGVPIIGIP 349 (484)
Q Consensus 320 h~~~~~~-IthgG~~s~~Eal---~-------~gvP~i~~P 349 (484)
..+++| +-.||.||+.|.. . +++|++.+.
T Consensus 130 -~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 130 -RYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp -HTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred -HhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 334554 5678899876653 3 579999875
No 92
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=33.14 E-value=53 Score=25.21 Aligned_cols=63 Identities=22% Similarity=0.267 Sum_probs=44.0
Q ss_pred CceeEEEecCCcch---------HHHHHhcCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 321 PNVKVFISHGGFLG---------TTEALYSGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 321 ~~~~~~IthgG~~s---------~~Eal~~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
..++++|.-.|..| +..|...|+|++++=..+.+. --..+++.+..+ +.. +.+.|.+||+..+
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~i-V~W---n~~~I~~aI~~~~ 108 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEV-VGW---NPHCIRDALEDAL 108 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEE-ECS---CHHHHHHHHHHHH
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCcee-ccC---CHHHHHHHHHhcc
Confidence 56888888888777 677889999999985555431 122244444443 323 7899999998876
No 93
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=33.12 E-value=1.3e+02 Score=25.44 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=50.6
Q ss_pred chHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCC----CCC-CCCCcEEEecccCc-cccc
Q psy11555 245 DIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGE----NMS-GKIDKILLKSWAPQ-RDIL 318 (484)
Q Consensus 245 ~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~----~~~-~~~~nv~~~~~~pq-~~ll 318 (484)
++-+++... +..+|+-|+.. -++++..++....+-+++=..... +.. ..-+.....+.+.. ..++
T Consensus 35 ~lg~~la~~--g~~lv~GGG~~-------GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~~~~i~~~~~~~Rk~~m 105 (189)
T 3sbx_A 35 AVGAAIAAR--GWTLVWGGGHV-------SAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVM 105 (189)
T ss_dssp HHHHHHHHT--TCEEEECCBCS-------HHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTCSEEEEESSHHHHHHHH
T ss_pred HHHHHHHHC--CCEEEECCCcc-------CHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCCCCeeEEcCCHHHHHHHH
Confidence 344455544 45556555441 356777777666655544433321 111 11123344455443 3333
Q ss_pred ccCceeEEE-ecCCcchHHHHH---------hcCCceeecc
Q psy11555 319 DHPNVKVFI-SHGGFLGTTEAL---------YSGVPIIGIP 349 (484)
Q Consensus 319 ~h~~~~~~I-thgG~~s~~Eal---------~~gvP~i~~P 349 (484)
. ..+++|| -.||.||+-|.. .+++|++++-
T Consensus 106 ~-~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 106 E-DRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp H-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred H-HHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 3 3456665 677789987764 2589999874
No 94
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=30.94 E-value=19 Score=30.64 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=32.0
Q ss_pred HHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC-------HHHHHHHHHHHHHHhC
Q psy11555 356 ANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN-------PSYKKRAEKVARLFQD 406 (484)
Q Consensus 356 ~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~-------~~~~~~a~~~~~~~~~ 406 (484)
..+..=+..|+|+.+ |++++.++|.+.++. ..|+ ++..+-..++.
T Consensus 103 d~~~Fe~~cGVGV~V-----T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 103 TKMGMNENSGVGIEI-----TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp CHHHHHHTTTTTCCC-----CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred CHHHHHHHCCCCeEe-----CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 345556678999888 889999999998843 2355 66666666655
No 95
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=30.82 E-value=91 Score=23.49 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=27.3
Q ss_pred HHHHhhcCC-CccEEEEcccch--hhHHHHHHHh-----CCCEEEEeCCCCc
Q psy11555 88 ALDLLHSSK-KYDLIITEVFNT--DCFLGFVYKF-----KVPYIAVSAAHII 131 (484)
Q Consensus 88 l~~~l~~~~-~~DlvI~d~~~~--~~~~~~A~~l-----~iP~i~~~~~~~~ 131 (484)
..+.++ .. +||+||.|..+. ..+..+.+.+ ++|+|.++.....
T Consensus 41 a~~~l~-~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 91 (132)
T 2rdm_A 41 AIEMLK-SGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAAL 91 (132)
T ss_dssp HHHHHH-TTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCT
T ss_pred HHHHHH-cCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccH
Confidence 445565 55 899999997643 2344444432 6899888776543
No 96
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=30.76 E-value=79 Score=27.68 Aligned_cols=86 Identities=12% Similarity=0.160 Sum_probs=55.8
Q ss_pred ccchHHHhhhcCceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCc
Q psy11555 243 PNDIKKFLDESVNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPN 322 (484)
Q Consensus 243 ~~~l~~~l~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~ 322 (484)
.+.+++|+... ..++++-.|+.. .........+.+++++++..+...-. .++ +. +.+ .+
T Consensus 21 ~~~l~~~~~~~-~~i~iI~~a~~~---~~~~~~~~~~~~al~~lG~~~~~v~~-------~~d-------~~-~~l--~~ 79 (229)
T 1fy2_A 21 LPLIANQLNGR-RSAVFIPFAGVT---QTWDEYTDKTAEVLAPLGVNVTGIHR-------VAD-------PL-AAI--EK 79 (229)
T ss_dssp HHHHHHHHTTC-CEEEEECTTCCS---SCHHHHHHHHHHHHGGGTCEEEETTS-------SSC-------HH-HHH--HH
T ss_pred HHHHHHHhcCC-CeEEEEECCCCC---CCHHHHHHHHHHHHHHCCCEEEEEec-------ccc-------HH-HHH--hc
Confidence 35577888643 478888888741 23567788899999998876544211 000 11 233 46
Q ss_pred eeEEEecCCcch--------------HHHHHhcCCceeecc
Q psy11555 323 VKVFISHGGFLG--------------TTEALYSGVPIIGIP 349 (484)
Q Consensus 323 ~~~~IthgG~~s--------------~~Eal~~gvP~i~~P 349 (484)
++.++--||..+ +.|++..|+|++++-
T Consensus 80 ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 80 AEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp CSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred CCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 788888888432 556667899998865
No 97
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=30.72 E-value=33 Score=32.26 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=26.5
Q ss_pred HHHHHhhcCCCccEEEEccc-c-hhhHHHHHHHhCCCEEEEeC
Q psy11555 87 AALDLLHSSKKYDLIITEVF-N-TDCFLGFVYKFKVPYIAVSA 127 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~-~-~~~~~~~A~~l~iP~i~~~~ 127 (484)
.+.++++ ..+||+|++... . ...+..+|...++|+|.+..
T Consensus 77 ~l~~~l~-~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~ 118 (384)
T 1vgv_A 77 GLKPILA-EFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA 118 (384)
T ss_dssp HHHHHHH-HHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred HHHHHHH-HhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence 4667776 678999998532 1 22334467778999886543
No 98
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=30.43 E-value=92 Score=23.99 Aligned_cols=43 Identities=14% Similarity=0.060 Sum_probs=27.1
Q ss_pred HHHHhhcCCCccEEEEcccch--hhHHHHHHH----hCCCEEEEeCCCC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT--DCFLGFVYK----FKVPYIAVSAAHI 130 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~--~~~~~~A~~----l~iP~i~~~~~~~ 130 (484)
..+.++...+||+||.|..+. ..+..+++. -++|+|.++...-
T Consensus 41 a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 89 (140)
T 3h5i_A 41 AVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTE 89 (140)
T ss_dssp HHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSS
T ss_pred HHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCC
Confidence 444554237899999997642 234444433 3789988877654
No 99
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=30.40 E-value=2.2e+02 Score=23.13 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=30.4
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCc-EEEecCCCCCHHHHHHHHHHHhC
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGF-GVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~-g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
..+|+|++--..+.. .+..+.+.|+ +... +.++.++|.++|+.++.
T Consensus 78 ~~~~ii~lt~~~~~~-~~~~a~~~Ga~~~l~--KP~~~~~L~~~i~~~~~ 124 (184)
T 3rqi_A 78 PDARILVLTGYASIA-TAVQAVKDGADNYLA--KPANVESILAALQTNAS 124 (184)
T ss_dssp TTCEEEEEESSCCHH-HHHHHHHHTCSEEEE--SSCCHHHHHHHTSTTHH
T ss_pred CCCCEEEEeCCCCHH-HHHHHHHhCHHHhee--CCCCHHHHHHHHHHHHH
Confidence 468888776555443 3444555665 5555 45689999999988773
No 100
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=30.10 E-value=1.7e+02 Score=21.72 Aligned_cols=47 Identities=11% Similarity=0.251 Sum_probs=32.1
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
..+|+|++--..+ ...+....+.|+--.+. +.++.++|.++|++++.
T Consensus 75 ~~~pii~~s~~~~-~~~~~~~~~~Ga~~~l~-KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGG-EEDESLALSLGARKVMR-KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCS-HHHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCc-hHHHHHHHhcChhhhcc-CCCCHHHHHHHHHHHhc
Confidence 3578887754443 34455666777655554 46789999999998874
No 101
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=29.76 E-value=43 Score=31.29 Aligned_cols=38 Identities=13% Similarity=0.060 Sum_probs=25.2
Q ss_pred HHHHhhcCCCccEEEEcccchh--hHHHHHHHhCCCEEEEe
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTD--CFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~--~~~~~A~~l~iP~i~~~ 126 (484)
+.++++ ..+||+|++...... .+..+|...++|+|.+.
T Consensus 87 l~~~l~-~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~ 126 (375)
T 3beo_A 87 LDKVMK-EAKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVE 126 (375)
T ss_dssp HHHHHH-HHCCSEEEEETTSHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHH-HhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 556676 678999999643112 22346778899998643
No 102
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=29.04 E-value=2.4e+02 Score=23.10 Aligned_cols=100 Identities=9% Similarity=0.085 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecc-cCcccccccCceeEEEecCCcchHHHHHh---cCCceeec
Q psy11555 273 SDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---SGVPIIGI 348 (484)
Q Consensus 273 ~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~-~pq~~ll~h~~~~~~IthgG~~s~~Eal~---~gvP~i~~ 348 (484)
......+...+...++.++....+.........+.+.++ +|..+ | .+.+.+. ..+|+|++
T Consensus 22 ~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~dlvl~D~~mp~~~--------------g--~l~~~~~~~~~~~~ii~l 85 (196)
T 1qo0_D 22 GEVSDALVLQLIRIGCSVRQCWPPPEAFDVPVDVVFTSIFQNRHH--------------D--EIAALLAAGTPRTTLVAL 85 (196)
T ss_dssp THHHHHHHHHHHHHTCEEEEECSCCSSCSSCCSEEEEECCSSTHH--------------H--HHHHHHHHSCTTCEEEEE
T ss_pred hhHHHHHHHHHHHcCCeEEEecCchhhCCCCCCEEEEeCCCCccc--------------h--HHHHHHhccCCCCCEEEE
Confidence 344555666666667777765554332222223333332 22111 2 2444443 46788877
Q ss_pred cCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 349 PMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 349 P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
--..+.. .+..+.+.|+--.+. +.++.++|..+|+.++..
T Consensus 86 t~~~~~~-~~~~a~~~ga~~~l~-KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 86 VEYESPA-VLSQIIELECHGVIT-QPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp ECCCSHH-HHHHHHHHTCSEEEE-SSCCGGGHHHHHHHHHHH
T ss_pred EcCCChH-HHHHHHHcCCCeeEe-cCcCHHHHHHHHHHHHHH
Confidence 5554443 455556666544443 356788899999888743
No 103
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=28.99 E-value=35 Score=34.32 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=25.6
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHh-------CCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKF-------KVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l-------~iP~i~~~ 126 (484)
++.+.++ +.++|++|..+. +..+|+++ |||++.++
T Consensus 429 ~l~~~i~-~~~pDLlig~s~----~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 429 HLRSLVF-TDKPDFMIGNSY----GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHH-HTCCSEEEECTT----HHHHHHHHHHHCGGGCCCEEECS
T ss_pred HHHHHHH-hcCCCEEEECcc----HHHHHHHhhcccccCCCceEEec
Confidence 4566676 779999999854 33467766 99998754
No 104
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=28.23 E-value=89 Score=26.88 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=53.8
Q ss_pred chHHHhhhc-CceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCc--ccccccC
Q psy11555 245 DIKKFLDES-VNGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQ--RDILDHP 321 (484)
Q Consensus 245 ~l~~~l~~~-~~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq--~~ll~h~ 321 (484)
.+.+|+... ...++++-.++.. ....+..+.+.+++++++..+.+.- +.. . -+. .+.+ .
T Consensus 17 ~~~~f~~~~~~~~i~~Ip~As~~---~~~~~~~~s~~~a~~~lG~~v~~~~----i~~-~--------~~~~~~~~l--~ 78 (206)
T 3l4e_A 17 LFTEFESNLQGKTVTFIPTASTV---EEVTFYVEAGKKALESLGLLVEELD----IAT-E--------SLGEITTKL--R 78 (206)
T ss_dssp HHHHHSCCCTTCEEEEECGGGGG---CSCCHHHHHHHHHHHHTTCEEEECC----TTT-S--------CHHHHHHHH--H
T ss_pred HHHHHHHHcCCCEEEEECCCCCC---CCHHHHHHHHHHHHHHcCCeEEEEE----ecC-C--------ChHHHHHHH--H
Confidence 456665332 2578888888763 2345788999999999998765531 000 0 010 0223 4
Q ss_pred ceeEEEecCCcc--------------hHHHHHhcCCceeecc
Q psy11555 322 NVKVFISHGGFL--------------GTTEALYSGVPIIGIP 349 (484)
Q Consensus 322 ~~~~~IthgG~~--------------s~~Eal~~gvP~i~~P 349 (484)
+++.++--||.. .+.|++..|+|++++-
T Consensus 79 ~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 79 KNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp HSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEET
T ss_pred hCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEEC
Confidence 577777777632 2566777899999865
No 105
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=28.03 E-value=1e+02 Score=23.68 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=26.8
Q ss_pred HHHHHhhcCCCccEEEEcccchh-hHHHHHHHh-----CCCEEEEeCCCCc
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTD-CFLGFVYKF-----KVPYIAVSAAHII 131 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~-~~~~~A~~l-----~iP~i~~~~~~~~ 131 (484)
+..+.++ ..+||+||.|. +.. .+..+.+.+ ++|+|.++.....
T Consensus 39 ~a~~~l~-~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~ 87 (142)
T 2qxy_A 39 EAFTFLR-REKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDK 87 (142)
T ss_dssp HHHHHHT-TSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCH
T ss_pred HHHHHHh-ccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCH
Confidence 3455665 67899999997 432 233333332 5888888776543
No 106
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=27.84 E-value=20 Score=33.22 Aligned_cols=54 Identities=17% Similarity=0.258 Sum_probs=37.5
Q ss_pred CceeEEEecCCcchHHHHHhc----CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 321 PNVKVFISHGGFLGTTEALYS----GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Eal~~----gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
..++++|+-||=||+.+++.. ++|+++++... .|... ++.++++.++++.+++.
T Consensus 74 ~~~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-------------~gfl~---~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 74 DGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGR-------------IGFLA---EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp --CCCEEEEECHHHHHHHHHHHHHHTCCEEEEECSS-------------CCSSC---SEEGGGHHHHHHHHHHT
T ss_pred cCCCEEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-------------CccCc---ccCHHHHHHHHHHHHcC
Confidence 568999999999999998754 89999998421 23222 23456777788777743
No 107
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=27.44 E-value=1.7e+02 Score=22.28 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=29.9
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCc-EEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGF-GVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~-g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
...|+|++--..+.......+...|+ +... +.++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~--KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLT--KPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEE--SSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhcc--CCCCHHHHHHHHHHHHHH
Confidence 35677776444444333444444555 5555 356899999999998843
No 108
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=27.22 E-value=2.4e+02 Score=23.48 Aligned_cols=138 Identities=16% Similarity=0.128 Sum_probs=71.6
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcch
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLG 334 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s 334 (484)
++.|-|-+||. ......+.....++.++..+-..+-+ ....|+.+ ..++... ....++++|.-+|.-.
T Consensus 7 ~~~V~IimgS~-----SD~~v~~~a~~~L~~~gi~~ev~V~S--aHR~p~~~--~~~~~~a---~~~g~~ViIa~AG~aa 74 (174)
T 3lp6_A 7 RPRVGVIMGSD-----SDWPVMADAAAALAEFDIPAEVRVVS--AHRTPEAM--FSYARGA---AARGLEVIIAGAGGAA 74 (174)
T ss_dssp CCSEEEEESCG-----GGHHHHHHHHHHHHHTTCCEEEEECC--TTTCHHHH--HHHHHHH---HHHTCCEEEEEEESSC
T ss_pred CCeEEEEECcH-----HhHHHHHHHHHHHHHcCCCEEEEEEC--CCCCHHHH--HHHHHHH---HhCCCCEEEEecCchh
Confidence 35677778887 23567888888888887653322221 11111111 1111000 1134678887777433
Q ss_pred ----HHHHHhcCCceeeccCCCchH--HHHH-HHHH--cCcEEE-ecCCC-CCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy11555 335 ----TTEALYSGVPIIGIPMFGDQK--ANIR-VVEK--AGFGVT-LPYDQ-ITEETVLVALRTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 335 ----~~Eal~~gvP~i~~P~~~dQ~--~na~-~~~~--~G~g~~-l~~~~-~~~~~l~~ai~~~l~~~~~~~~a~~~~~~ 403 (484)
+..++ .-+|+|++|...... ..+- -+.+ .|+++. +..+. .+..-+...|.. +.|+.++++.++..+.
T Consensus 75 ~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~-~~d~~l~~kl~~~r~~ 152 (174)
T 3lp6_A 75 HLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLG-AANPQLRARIVAFQDR 152 (174)
T ss_dssp CHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHh-CCCHHHHHHHHHHHHH
Confidence 33333 569999999753211 1211 1222 253222 33332 233334444433 4689999999888877
Q ss_pred HhC
Q psy11555 404 FQD 406 (484)
Q Consensus 404 ~~~ 406 (484)
.++
T Consensus 153 ~~~ 155 (174)
T 3lp6_A 153 LAD 155 (174)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 109
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=26.42 E-value=2.9e+02 Score=23.18 Aligned_cols=138 Identities=13% Similarity=0.178 Sum_probs=74.8
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFL- 333 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~- 333 (484)
-|.|-|-+||. ...+..+.....++.++..+-..+-+ ....|+.+ ..+..+. ....++++|.=+|.-
T Consensus 13 ~~~V~IimGS~-----SD~~v~~~a~~~L~~~Gi~~dv~V~S--aHR~p~~l--~~~~~~a---~~~g~~ViIa~AG~aa 80 (183)
T 1o4v_A 13 VPRVGIIMGSD-----SDLPVMKQAAEILEEFGIDYEITIVS--AHRTPDRM--FEYAKNA---EERGIEVIIAGAGGAA 80 (183)
T ss_dssp -CEEEEEESCG-----GGHHHHHHHHHHHHHTTCEEEEEECC--TTTCHHHH--HHHHHHT---TTTTCCEEEEEEESSC
T ss_pred CCeEEEEeccH-----HHHHHHHHHHHHHHHcCCCeEEEEEc--ccCCHHHH--HHHHHHH---HhCCCcEEEEecCccc
Confidence 36788888887 34577888888898888764333222 11122211 1111111 113467888777643
Q ss_pred ---hHHHHHhcCCceeeccCCCc--hHHHH-HHHHHc--CcEEE-ecCCC-CCHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q psy11555 334 ---GTTEALYSGVPIIGIPMFGD--QKANI-RVVEKA--GFGVT-LPYDQ-ITEETVLVALRTVLGNPSYKKRAEKVARL 403 (484)
Q Consensus 334 ---s~~Eal~~gvP~i~~P~~~d--Q~~na-~~~~~~--G~g~~-l~~~~-~~~~~l~~ai~~~l~~~~~~~~a~~~~~~ 403 (484)
++..++ .-+|+|++|.... .-..+ --+.+. |+.+. +..++ .+..-++..|. -+.|+.++++.+.....
T Consensus 81 ~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIl-a~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 81 HLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASIL-GIKYPEIARKVKEYKER 158 (183)
T ss_dssp CHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 344333 6699999998542 22222 123444 64332 33332 23344444443 34689999888888776
Q ss_pred HhC
Q psy11555 404 FQD 406 (484)
Q Consensus 404 ~~~ 406 (484)
...
T Consensus 159 ~~~ 161 (183)
T 1o4v_A 159 MKR 161 (183)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 110
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=26.21 E-value=1.6e+02 Score=25.55 Aligned_cols=87 Identities=14% Similarity=0.029 Sum_probs=45.8
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCC-CCC----CcEEEecccCc-ccccccCcee-EEEe
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMS-GKI----DKILLKSWAPQ-RDILDHPNVK-VFIS 328 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-~~~----~nv~~~~~~pq-~~ll~h~~~~-~~It 328 (484)
+..+|+-|... -.+....++....+-+++=+....... +.+ ....+...+++ +.++. ..++ .++-
T Consensus 45 G~~vVsGGg~~-------GiM~aa~~gAl~~GG~tiGVlP~~~~~~e~~~~~~~~~~~~~~f~~Rk~~~~-~~sda~Vvl 116 (215)
T 2a33_A 45 NIDLVYGGGSI-------GLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMA-KHSDAFIAL 116 (215)
T ss_dssp TCEEEECCCSS-------HHHHHHHHHHHHTTCCEEEEEESSCC--------CCEEEEESSHHHHHHHHH-HTCSEEEEC
T ss_pred CCEEEECCChh-------hHhHHHHHHHHHcCCcEEEEcchHhcchhhccCCCCceeecCCHHHHHHHHH-HhCCEEEEe
Confidence 56666665531 245555555555544444444432211 111 12344555554 33333 2334 4457
Q ss_pred cCCcchHHHHHh---------cCCceeeccC
Q psy11555 329 HGGFLGTTEALY---------SGVPIIGIPM 350 (484)
Q Consensus 329 hgG~~s~~Eal~---------~gvP~i~~P~ 350 (484)
.||.||+-|... +++|++++-.
T Consensus 117 pGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 117 PGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp SCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred CCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 889999877763 4899998854
No 111
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.91 E-value=66 Score=22.72 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=32.1
Q ss_pred hcCCceeeccCCCchHHHH---HHHHHcCcEEEecCCCCCHHHHHHHHHHHh
Q psy11555 340 YSGVPIIGIPMFGDQKANI---RVVEKAGFGVTLPYDQITEETVLVALRTVL 388 (484)
Q Consensus 340 ~~gvP~i~~P~~~dQ~~na---~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l 388 (484)
-.|+|++++--.+.|...- ....+.|+..-+- +..++++|.+.+++.|
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvl-kstdpeeltqrvrefl 99 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL-KSTDPEELTQRVREFL 99 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE-ECCCHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh-ccCCHHHHHHHHHHHH
Confidence 4688988876666665422 2344557776553 3447899999988876
No 112
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=25.73 E-value=39 Score=33.31 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=26.9
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEEEe
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~ 126 (484)
++.++++ +.++|++|.... ...+|+++|||++.++
T Consensus 366 ~le~~i~-~~~pDllig~~~----~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAAR-AGQAQLVIGNSH----ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHH-HHTCSEEEECTT----HHHHHHHTTCCEEECS
T ss_pred HHHHHHH-hcCCCEEEEChh----HHHHHHHcCCCEEEec
Confidence 3556676 678999999844 4568999999998654
No 113
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=25.66 E-value=2.3e+02 Score=30.12 Aligned_cols=84 Identities=8% Similarity=0.114 Sum_probs=49.8
Q ss_pred eEEEecCCcchHHHHHhcC-Cc----eeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCCHHHHHHHH
Q psy11555 324 KVFISHGGFLGTTEALYSG-VP----IIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGNPSYKKRAE 398 (484)
Q Consensus 324 ~~~IthgG~~s~~Eal~~g-vP----~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~a~ 398 (484)
.+|+.||-.+.+.|.++-. .| ++++|-+++-..-... +....++.+.|.+++.+++. ..++.
T Consensus 725 ~i~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eL---------l~~~gld~~~Iv~~a~~~l~----~~~~~ 791 (845)
T 3ahc_A 725 VLFAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDM---------VRVNDMDRYALQAAALKLID----ADKYA 791 (845)
T ss_dssp EEEEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHH---------HHTTTCSHHHHHHHHHHHHH----TTTTH
T ss_pred ceeeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHH---------HHHhCcCHHHHHHHHHHHcc----hhhHH
Confidence 3555777666778887766 33 4455655422122222 23456789999999999884 44455
Q ss_pred HHHHHHhCCCCChHHHHHHHHHHHHHcCC
Q psy11555 399 KVARLFQDRPMPPLDTAIYWIEHVIRHGG 427 (484)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~ie~~~~~~~ 427 (484)
.+.+.+.+ ...+.-.|+.+++.
T Consensus 792 ~~~~~~~~-------~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 792 DKIDELNA-------FRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHH-------HHHHHHHHHHHHSS
T ss_pred HHHHHHHH-------HHHHHHHHHHHhCC
Confidence 55555533 34555667777743
No 114
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=25.56 E-value=1.1e+02 Score=25.20 Aligned_cols=29 Identities=24% Similarity=0.527 Sum_probs=23.7
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCc
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 288 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~ 288 (484)
.+|+++||+.. .+.+.++..++++++.+.
T Consensus 3 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLA---MPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSS---SCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchh---hHHHHHHHHHHHHhcCCC
Confidence 58999999964 577888888898888764
No 115
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=25.49 E-value=1.2e+02 Score=23.79 Aligned_cols=44 Identities=20% Similarity=0.163 Sum_probs=27.3
Q ss_pred HHHHHhhcCCCccEEEEcccch-hhHHHHHHH-------hCCCEEEEeCCCCc
Q psy11555 87 AALDLLHSSKKYDLIITEVFNT-DCFLGFVYK-------FKVPYIAVSAAHII 131 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~-~~~~~~A~~-------l~iP~i~~~~~~~~ 131 (484)
+..+.++ ..+||+||.|..+. ..+..+++. -++|+|.++.....
T Consensus 42 ~al~~l~-~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~ 93 (154)
T 3gt7_A 42 EAVRFLS-LTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDP 93 (154)
T ss_dssp HHHHHHT-TCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSH
T ss_pred HHHHHHH-hCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCCh
Confidence 3455665 77899999997532 123333333 36788888765543
No 116
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.27 E-value=1.4e+02 Score=22.78 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=25.7
Q ss_pred HHHHhhcCCCccEEEEcccch-hhHHHHHHHh-------CCCEEEEeCCCC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT-DCFLGFVYKF-------KVPYIAVSAAHI 130 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~-~~~~~~A~~l-------~iP~i~~~~~~~ 130 (484)
..+.++ ..+||+||.|..+. .-+..+.+.+ .+|+|.++....
T Consensus 39 al~~l~-~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~ 88 (138)
T 3c3m_A 39 CLEALN-ATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKPL 88 (138)
T ss_dssp HHHHHH-HSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSCC
T ss_pred HHHHHh-ccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCCC
Confidence 344554 56799999997542 1234444332 578888877653
No 117
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=25.19 E-value=1.9e+02 Score=22.35 Aligned_cols=51 Identities=6% Similarity=-0.055 Sum_probs=32.1
Q ss_pred cCCceeeccCCCchHHHHHHHHHcC-c-EEEecCCCCCHHHHHHHHHHHhCCHHHH
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAG-F-GVTLPYDQITEETVLVALRTVLGNPSYK 394 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G-~-g~~l~~~~~~~~~l~~ai~~~l~~~~~~ 394 (484)
..+|+|++--..+.. ......+.| + +... +.++.++|.++|+.++....+.
T Consensus 75 ~~~~ii~~s~~~~~~-~~~~~~~~g~~~~~l~--KP~~~~~L~~~i~~~l~~~~~~ 127 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLT-TAMEAVNEGQVFRFLN--KPCQMSDIKAAINAGIKQYDLV 127 (151)
T ss_dssp SSCEEEEEECGGGHH-HHHHHHHHTCCSEEEE--SSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHH-HHHHHHHcCCeeEEEc--CCCCHHHHHHHHHHHHHHHHHH
Confidence 467777664444433 334445556 4 5555 4568999999999999654443
No 118
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.18 E-value=76 Score=24.27 Aligned_cols=44 Identities=9% Similarity=0.121 Sum_probs=27.1
Q ss_pred HHHHhhcCCCccEEEEcccch--hhHHHHHHH----hCCCEEEEeCCCCch
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT--DCFLGFVYK----FKVPYIAVSAAHIIP 132 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~--~~~~~~A~~----l~iP~i~~~~~~~~~ 132 (484)
..+.++ ..+||+||.|..+. ..+..+.+. .++|+|.++......
T Consensus 46 a~~~~~-~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~ 95 (140)
T 3cg0_A 46 AVRCAP-DLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVE 95 (140)
T ss_dssp HHHHHH-HHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHH
T ss_pred HHHHHH-hCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHH
Confidence 344454 45799999996542 234444433 378999887765433
No 119
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=25.17 E-value=1.6e+02 Score=24.08 Aligned_cols=136 Identities=10% Similarity=0.077 Sum_probs=70.1
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccC-ceeEEEecCCcch
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHP-NVKVFISHGGFLG 334 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~-~~~~~IthgG~~s 334 (484)
+.|-|-+||. ...+..+...+.++.++..+-..+-+ ....|+.+ ..|..+. .+. .++++|.-+|.-.
T Consensus 3 ~~V~Iimgs~-----SD~~v~~~a~~~l~~~gi~~ev~V~s--aHR~p~~~--~~~~~~a---~~~~~~~ViIa~AG~aa 70 (159)
T 3rg8_A 3 PLVIILMGSS-----SDMGHAEKIASELKTFGIEYAIRIGS--AHKTAEHV--VSMLKEY---EALDRPKLYITIAGRSN 70 (159)
T ss_dssp CEEEEEESSG-----GGHHHHHHHHHHHHHTTCEEEEEECC--TTTCHHHH--HHHHHHH---HTSCSCEEEEEECCSSC
T ss_pred CeEEEEECcH-----HHHHHHHHHHHHHHHcCCCEEEEEEc--ccCCHHHH--HHHHHHh---hhcCCCcEEEEECCchh
Confidence 4566777777 23567888888888888654333222 11111110 1111110 112 3788998887543
Q ss_pred ----HHHHHhcCCceeeccCCCchH--HHHHHHHHc--CcEEE-ecCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q psy11555 335 ----TTEALYSGVPIIGIPMFGDQK--ANIRVVEKA--GFGVT-LPYDQITEETVLVALRTVLGNPSYKKRAEKVARLFQ 405 (484)
Q Consensus 335 ----~~Eal~~gvP~i~~P~~~dQ~--~na~~~~~~--G~g~~-l~~~~~~~~~l~~ai~~~l~~~~~~~~a~~~~~~~~ 405 (484)
+..++ .-+|+|++|...... ..---+.+. |+.+. ++ ...+..-+...|. -+.|+.++++.+...+...
T Consensus 71 ~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv~-~~~nAa~lA~~Il-~~~d~~l~~kl~~~r~~~~ 147 (159)
T 3rg8_A 71 ALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMPSGISPALVL-EPKNAALLAARIF-SLYDKEIADSVKSYMESNA 147 (159)
T ss_dssp CHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCCTTCCCEECC-SHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCCCCCceEEec-CchHHHHHHHHHH-hCCCHHHHHHHHHHHHHHH
Confidence 33333 569999999743211 112222233 55543 31 2123333333333 2468889888888776554
Q ss_pred C
Q psy11555 406 D 406 (484)
Q Consensus 406 ~ 406 (484)
+
T Consensus 148 ~ 148 (159)
T 3rg8_A 148 Q 148 (159)
T ss_dssp H
T ss_pred H
Confidence 3
No 120
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=24.52 E-value=88 Score=25.70 Aligned_cols=29 Identities=34% Similarity=0.620 Sum_probs=22.7
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCc
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 288 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~ 288 (484)
.+|+++||+.. .+.+.++..++++++.+.
T Consensus 2 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 30 (158)
T 1f9y_A 2 VAYIAIGSNLA---SPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecCcc---CHHHHHHHHHHHHhcCCC
Confidence 58999999963 467778888888887754
No 121
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=24.27 E-value=3e+02 Score=22.73 Aligned_cols=139 Identities=13% Similarity=0.124 Sum_probs=74.1
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcch
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLG 334 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s 334 (484)
+|.|-|-+||. ...+..+...+.++.++..+-..+-+ ....|+.+ ..+..+. ....++++|.=+|.-.
T Consensus 11 ~~~V~IimGS~-----SD~~v~~~a~~~L~~~Gi~~dv~V~S--aHR~p~~l--~~~~~~a---~~~g~~ViIa~AG~aa 78 (170)
T 1xmp_A 11 KSLVGVIMGST-----SDWETMKYACDILDELNIPYEKKVVS--AHRTPDYM--FEYAETA---RERGLKVIIAGAGGAA 78 (170)
T ss_dssp CCSEEEEESSG-----GGHHHHHHHHHHHHHTTCCEEEEECC--TTTSHHHH--HHHHHHT---TTTTCCEEEEEEESSC
T ss_pred CCcEEEEECcH-----HHHHHHHHHHHHHHHcCCCEEEEEEe--ccCCHHHH--HHHHHHH---HhCCCcEEEEECCchh
Confidence 57788888888 34577888888888887653332221 11122211 1111111 1123678887777543
Q ss_pred HHHHHh---cCCceeeccCCCc--hHHHH-HHHHH--cCcEEE-ecCC--C-CCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 335 TTEALY---SGVPIIGIPMFGD--QKANI-RVVEK--AGFGVT-LPYD--Q-ITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 335 ~~Eal~---~gvP~i~~P~~~d--Q~~na-~~~~~--~G~g~~-l~~~--~-~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
-+-.+. .-+|+|++|.... .-..+ --+.+ .|+.+. +..+ + .+..-+...|. -+.|+.++++.+...+
T Consensus 79 ~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~~l~~kl~~~r~ 157 (170)
T 1xmp_A 79 HLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHDDIHDALELRRE 157 (170)
T ss_dssp CHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred hhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCHHHHHHHHHHHH
Confidence 333332 3589999998542 22222 22333 455432 3222 1 23344444443 3478999998888877
Q ss_pred HHhC
Q psy11555 403 LFQD 406 (484)
Q Consensus 403 ~~~~ 406 (484)
..++
T Consensus 158 ~~~~ 161 (170)
T 1xmp_A 158 AIEK 161 (170)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 122
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=24.10 E-value=1e+02 Score=28.49 Aligned_cols=23 Identities=9% Similarity=0.268 Sum_probs=17.9
Q ss_pred hCCHHHHHHhhcCCCccEEEEccc
Q psy11555 83 MSTKAALDLLHSSKKYDLIITEVF 106 (484)
Q Consensus 83 l~~~~l~~~l~~~~~~DlvI~d~~ 106 (484)
++++++.+.|+ +.++|++++-.+
T Consensus 67 ~~~~~~~~~l~-~~~~Dliv~~~~ 89 (314)
T 3tqq_A 67 LRDEVEQEKLI-AMNADVMVVVAY 89 (314)
T ss_dssp SSSHHHHHHHH-TTCCSEEEEESC
T ss_pred CCCHHHHHHHH-hcCCCEEEEcCc
Confidence 34556778887 889999999765
No 123
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=23.98 E-value=65 Score=27.55 Aligned_cols=65 Identities=14% Similarity=0.146 Sum_probs=40.7
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcch-
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLG- 334 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s- 334 (484)
.++++=+|+. .+..+.+++++++..+.+... .+.+ ..++.+|-.||..+
T Consensus 4 ~I~iiD~g~~---------n~~si~~al~~~G~~~~v~~~-------------------~~~l--~~~D~lilPG~g~~~ 53 (211)
T 4gud_A 4 NVVIIDTGCA---------NISSVKFAIERLGYAVTISRD-------------------PQVV--LAADKLFLPGVGTAS 53 (211)
T ss_dssp CEEEECCCCT---------THHHHHHHHHHTTCCEEEECC-------------------HHHH--HHCSEEEECCCSCHH
T ss_pred EEEEEECCCC---------hHHHHHHHHHHCCCEEEEECC-------------------HHHH--hCCCEEEECCCCCHH
Confidence 4677777765 256688888989886655311 1123 34567777775322
Q ss_pred -----------HHHHHhcCCceeeccC
Q psy11555 335 -----------TTEALYSGVPIIGIPM 350 (484)
Q Consensus 335 -----------~~Eal~~gvP~i~~P~ 350 (484)
+.++...|+|++++-.
T Consensus 54 ~~~~~~~~~~~i~~~~~~~~PvlGICl 80 (211)
T 4gud_A 54 EAMKNLTERDLIELVKRVEKPLLGICL 80 (211)
T ss_dssp HHHHHHHHTTCHHHHHHCCSCEEEETH
T ss_pred HHHHHHHhcChHHHHHHcCCCEEEEch
Confidence 3345668999998864
No 124
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.40 E-value=1.1e+02 Score=23.59 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=25.2
Q ss_pred HHHHhhcCCCccEEEEcccch-hhHHHHHHHh-----CCCEEEEeCCC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNT-DCFLGFVYKF-----KVPYIAVSAAH 129 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~-~~~~~~A~~l-----~iP~i~~~~~~ 129 (484)
..+.++ ..+||+||.|..+. ..+..+++.+ ++|+|.++...
T Consensus 41 al~~~~-~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~ 87 (141)
T 3cu5_A 41 AIQIAL-KHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYS 87 (141)
T ss_dssp HHHHHT-TSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCST
T ss_pred HHHHHh-cCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCC
Confidence 344555 66899999997542 1344444332 57888777654
No 125
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=22.67 E-value=1e+02 Score=25.35 Aligned_cols=29 Identities=34% Similarity=0.620 Sum_probs=21.9
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCc
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 288 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~ 288 (484)
+.|+++||... .+.+.++..++++++.+.
T Consensus 2 iAyi~lGSNlG---d~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLA---SPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchh---hHHHHHHHHHHHHHcCCC
Confidence 56999999963 456777888888877654
No 126
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.62 E-value=2.2e+02 Score=24.78 Aligned_cols=97 Identities=7% Similarity=-0.011 Sum_probs=50.2
Q ss_pred CceeEEEecCCcchHHHH----HhcCCceeec--cCCCchHHHHHHHHHcCcEEEecCCCCC---HHHHHHHHHHHhCC-
Q psy11555 321 PNVKVFISHGGFLGTTEA----LYSGVPIIGI--PMFGDQKANIRVVEKAGFGVTLPYDQIT---EETVLVALRTVLGN- 390 (484)
Q Consensus 321 ~~~~~~IthgG~~s~~Ea----l~~gvP~i~~--P~~~dQ~~na~~~~~~G~g~~l~~~~~~---~~~l~~ai~~~l~~- 390 (484)
..++++|.--|--.+.+. ...|+|+-++ |-..| +..-..+.+.++-+.+....-+ +..|.+.|++.+..
T Consensus 90 ~~adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p~~~~-f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~lp~~ 168 (223)
T 3dfz_A 90 LNVFFIVVATNDQAVNKFVKQHIKNDQLVNMASSFSDGN-IQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSNYDES 168 (223)
T ss_dssp SSCSEEEECCCCTHHHHHHHHHSCTTCEEEC-----CCS-EECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCcccCe-EEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHHccHH
Confidence 468899888876544333 3357776553 21111 0001112223444445443323 35566667666633
Q ss_pred -HHHHHHHHHHHHHHhCCCCChHHHHHHH
Q psy11555 391 -PSYKKRAEKVARLFQDRPMPPLDTAIYW 418 (484)
Q Consensus 391 -~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 418 (484)
..+-+.+.++.+.++..-.++.++-.+|
T Consensus 169 ~~~~~~~~~~~R~~vk~~~~~~~~Rr~~~ 197 (223)
T 3dfz_A 169 YTQYTQFLYECRVLIHRLNVSKSRKHELL 197 (223)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 3466777777777776545556664444
No 127
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=22.49 E-value=3.4e+02 Score=22.69 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=73.3
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcc-
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFL- 333 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~- 333 (484)
.+.|-|-+||. ......+.....++.++..+-..+-+ ....|+.+ ..|..+. ....++++|.-+|.-
T Consensus 21 ~~~V~IimGS~-----SD~~v~~~a~~~L~~~Gi~~dv~V~S--aHR~p~~l--~~~~~~a---~~~g~~ViIa~AG~aa 88 (182)
T 1u11_A 21 APVVGIIMGSQ-----SDWETMRHADALLTELEIPHETLIVS--AHRTPDRL--ADYARTA---AERGLNVIIAGAGGAA 88 (182)
T ss_dssp CCSEEEEESSG-----GGHHHHHHHHHHHHHTTCCEEEEECC--TTTCHHHH--HHHHHHT---TTTTCCEEEEEEESSC
T ss_pred CCEEEEEECcH-----HHHHHHHHHHHHHHHcCCCeEEEEEc--ccCCHHHH--HHHHHHH---HhCCCcEEEEecCchh
Confidence 35677778887 33577888888888887653332221 11112211 1111111 112367888777643
Q ss_pred ---hHHHHHhcCCceeeccCCCc--hHHHH-HHHHH--cCcEEE-ecCC--C-CCHHHHHHHHHHHhCCHHHHHHHHHHH
Q psy11555 334 ---GTTEALYSGVPIIGIPMFGD--QKANI-RVVEK--AGFGVT-LPYD--Q-ITEETVLVALRTVLGNPSYKKRAEKVA 401 (484)
Q Consensus 334 ---s~~Eal~~gvP~i~~P~~~d--Q~~na-~~~~~--~G~g~~-l~~~--~-~~~~~l~~ai~~~l~~~~~~~~a~~~~ 401 (484)
++..++ .-+|+|++|.... .-..+ --+.+ .|+.+. +..+ + .+..-+...|. -+.|+.++++.+...
T Consensus 89 ~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~~l~~kL~~~r 166 (182)
T 1u11_A 89 HLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASIL-ALYNPALAARLETWR 166 (182)
T ss_dssp CHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-GGGCHHHHHHHHHHH
T ss_pred hhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHH-ccCCHHHHHHHHHHH
Confidence 344333 4799999998542 22222 22334 466532 3332 1 23333444443 346888998888877
Q ss_pred HHHhC
Q psy11555 402 RLFQD 406 (484)
Q Consensus 402 ~~~~~ 406 (484)
+...+
T Consensus 167 ~~~~~ 171 (182)
T 1u11_A 167 ALQTA 171 (182)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 128
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=22.35 E-value=1e+02 Score=25.36 Aligned_cols=29 Identities=28% Similarity=0.523 Sum_probs=22.8
Q ss_pred EEEEeecceeccCCCChHHHHHHHHHHhcCCc
Q psy11555 257 VIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 288 (484)
Q Consensus 257 ~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~ 288 (484)
.+|+++||+.. .+.+.++..++++++.+.
T Consensus 3 ~~~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLN---TPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSS---CHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccch---HHHHHHHHHHHHHhhCCC
Confidence 58999999963 566778888888887754
No 129
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=22.23 E-value=75 Score=28.45 Aligned_cols=38 Identities=13% Similarity=-0.025 Sum_probs=27.8
Q ss_pred HHHHhhcCCCccEEEEcccc-----hhhHHHHHHHhCCCEEEEe
Q psy11555 88 ALDLLHSSKKYDLIITEVFN-----TDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~-----~~~~~~~A~~l~iP~i~~~ 126 (484)
+.+.++ ..+||+|++.... ...+..+|+++|+|.+...
T Consensus 108 La~~i~-~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v 150 (255)
T 1efv_B 108 LAKLAE-KEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFA 150 (255)
T ss_dssp HHHHHH-HHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHH-hcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccce
Confidence 344454 4579999998653 2477889999999988643
No 130
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=22.21 E-value=1.6e+02 Score=21.58 Aligned_cols=50 Identities=6% Similarity=0.088 Sum_probs=34.2
Q ss_pred HHHHhCCH----HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCccc
Q psy11555 384 LRTVLGNP----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHLRP 433 (484)
Q Consensus 384 i~~~l~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~l~~ 433 (484)
+.++.+|. ..|+.|.+..+.+.+...++.-+|+..|..+-+-...+.+-.
T Consensus 23 L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAAtAIs~LDeISnDPNmP~ 76 (94)
T 2qzg_A 23 LEEIVEDTTVPRNIRAAADNAKNALHNEEQELIVRSATAIQYLDDISEDPNMPI 76 (94)
T ss_dssp HHHHHTCTTSCHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHTTCTTCCH
T ss_pred HHHHHcCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCCCh
Confidence 44445563 488888889999988777888887777766555544454433
No 131
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=22.18 E-value=1.3e+02 Score=21.86 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=24.9
Q ss_pred HHHHhhcCCCccEEEEcccchh-hHHHHHHHh-----CCCEEEEeCCC
Q psy11555 88 ALDLLHSSKKYDLIITEVFNTD-CFLGFVYKF-----KVPYIAVSAAH 129 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~~~-~~~~~A~~l-----~iP~i~~~~~~ 129 (484)
..+.++ ..+||+++.|..+.. -+..+.+.+ ++|+|.++...
T Consensus 37 a~~~~~-~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 83 (116)
T 3a10_A 37 ALKKFF-SGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYS 83 (116)
T ss_dssp HHHHHH-HSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCG
T ss_pred HHHHHh-cCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCc
Confidence 344554 568999999975421 233333332 57888887654
No 132
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.69 E-value=2e+02 Score=26.81 Aligned_cols=46 Identities=4% Similarity=0.001 Sum_probs=27.6
Q ss_pred hHHHhhhcC-ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecC
Q psy11555 246 IKKFLDESV-NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEG 296 (484)
Q Consensus 246 l~~~l~~~~-~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 296 (484)
+.+.+..++ .++|+|+.-.. .+....+..++.+++.+..+...+-+
T Consensus 228 ~~~~L~d~~~~~~vlV~~p~~-----~~~~e~~r~~~~l~~~~i~v~gvV~N 274 (349)
T 3ug7_A 228 ARNILSDPERTAFRLVVIPEE-----MSILESERAMKALQKYGIPIDAVIVN 274 (349)
T ss_dssp HHHHHTCTTTEEEEEEECSSH-----HHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHhCCCCceEEEEECCCc-----cHHHHHHHHHHHHHHCCCCeeEEEEc
Confidence 334455544 57788776444 33556677777788877766554443
No 133
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.65 E-value=83 Score=28.30 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=27.8
Q ss_pred HHHHhhcCCCccEEEEcccc-----hhhHHHHHHHhCCCEEEEe
Q psy11555 88 ALDLLHSSKKYDLIITEVFN-----TDCFLGFVYKFKVPYIAVS 126 (484)
Q Consensus 88 l~~~l~~~~~~DlvI~d~~~-----~~~~~~~A~~l~iP~i~~~ 126 (484)
+.+.++ ..+||+|++.... ...+..+|+++|+|.+...
T Consensus 104 La~~i~-~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v 146 (264)
T 1o97_C 104 LTEVIK-KEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVV 146 (264)
T ss_dssp HHHHHH-HHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHH-hcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccce
Confidence 344554 4579999998653 2377889999999988643
No 134
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=21.53 E-value=1.5e+02 Score=21.55 Aligned_cols=50 Identities=6% Similarity=-0.047 Sum_probs=33.3
Q ss_pred HHHHHHhCCH----HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHcCCCCCc
Q psy11555 382 VALRTVLGNP----SYKKRAEKVARLFQDRPMPPLDTAIYWIEHVIRHGGGAHL 431 (484)
Q Consensus 382 ~ai~~~l~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~ie~~~~~~~~~~l 431 (484)
+.+.++.+|. ..|+.|.+..+.+.+...++.-+|+..|..+-+-...+.+
T Consensus 17 ~~L~~I~~D~sVPRNIRraA~ea~~~L~~e~~~~~vRAA~aIs~LDeISnDPNm 70 (89)
T 2qsb_A 17 YLLDELSQDITVPKNVRKVAQDSKAKLSQENESLDLRCATVLSMLDEMANDPNV 70 (89)
T ss_dssp HHHHHHHTCTTSCHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHhhcCCCC
Confidence 3455666664 4889999999999887777777777666554443333434
No 135
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=21.40 E-value=2.6e+02 Score=20.93 Aligned_cols=102 Identities=11% Similarity=0.021 Sum_probs=56.5
Q ss_pred CChHHHHHHHHHHhcCC-cEEEEEecCCC----CCCCCCcEEEecc-cCcccccccCceeEEEecCCcchHHHHHh---c
Q psy11555 271 FPSDKRKAFLRAFEQIP-QRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY---S 341 (484)
Q Consensus 271 ~~~~~~~~~~~a~~~~~-~~~i~~~~~~~----~~~~~~nv~~~~~-~pq~~ll~h~~~~~~IthgG~~s~~Eal~---~ 341 (484)
........+...++..+ +.+.....+.+ +...+..+.+.++ +|..+ |. .+.+.+. .
T Consensus 22 d~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~--------------g~-~~~~~l~~~~~ 86 (135)
T 3snk_A 22 SDPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADTRPGIVILDLGGGDLL--------------GK-PGIVEARALWA 86 (135)
T ss_dssp SCHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGG--------------GS-TTHHHHHGGGT
T ss_pred CCHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhccCCCEEEEeCCCCCch--------------HH-HHHHHHHhhCC
Confidence 34455666777777777 77775444322 2222334444443 33322 22 2223222 2
Q ss_pred CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 342 GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 342 gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
.+|+|++--..+. .....+.+.|+--.+. +.++.++|..+|++++.
T Consensus 87 ~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 87 TVPLIAVSDELTS-EQTRVLVRMNASDWLH-KPLDGKELLNAVTFHDT 132 (135)
T ss_dssp TCCEEEEESCCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHTC-
T ss_pred CCcEEEEeCCCCH-HHHHHHHHcCcHhhcc-CCCCHHHHHHHHHHHhc
Confidence 6788877554444 3445556667655554 46799999999998874
No 136
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.37 E-value=58 Score=32.41 Aligned_cols=33 Identities=18% Similarity=0.141 Sum_probs=25.8
Q ss_pred HHHHHhhcCCCccEEEEcccchhhHHHHHHHhCCCEEE
Q psy11555 87 AALDLLHSSKKYDLIITEVFNTDCFLGFVYKFKVPYIA 124 (484)
Q Consensus 87 ~l~~~l~~~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~ 124 (484)
++.+.++ ..+||++|.... ...+|+++|||++.
T Consensus 408 el~~~i~-~~~pDL~ig~~~----~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 408 EFEEFVK-RIKPDLIGSGIK----EKFIFQKMGIPFRE 440 (492)
T ss_dssp HHHHHHH-HHCCSEEEECHH----HHHHHHHTTCCEEE
T ss_pred HHHHHHH-hcCCcEEEeCcc----hhHHHHHcCCCEEe
Confidence 4566666 679999999743 45689999999985
No 137
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.29 E-value=80 Score=26.88 Aligned_cols=30 Identities=3% Similarity=0.016 Sum_probs=24.5
Q ss_pred CCCccEEEEcccchhhHHHHHHHhCCCEEEEeCC
Q psy11555 95 SKKYDLIITEVFNTDCFLGFVYKFKVPYIAVSAA 128 (484)
Q Consensus 95 ~~~~DlvI~d~~~~~~~~~~A~~l~iP~i~~~~~ 128 (484)
+.++|+||.+.. ...+|+++|+|.+.+.+.
T Consensus 140 ~~G~~vvVG~~~----~~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 140 TENIKIVVSGKT----VTDEAIKQGLYGETINSG 169 (196)
T ss_dssp HTTCCEEEECHH----HHHHHHHTTCEEEECCCC
T ss_pred HCCCeEEECCHH----HHHHHHHcCCcEEEEecC
Confidence 679999999843 456799999999887664
No 138
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=21.16 E-value=1.3e+02 Score=27.81 Aligned_cols=22 Identities=14% Similarity=0.286 Sum_probs=17.5
Q ss_pred CCHHHHHHhhcCCCccEEEEccc
Q psy11555 84 STKAALDLLHSSKKYDLIITEVF 106 (484)
Q Consensus 84 ~~~~l~~~l~~~~~~DlvI~d~~ 106 (484)
+++++.+.|+ +.++|++++-.+
T Consensus 73 ~~~~~~~~l~-~~~~Dliv~~~y 94 (318)
T 3q0i_A 73 KSDESKQQLA-ALNADLMVVVAY 94 (318)
T ss_dssp CSHHHHHHHH-TTCCSEEEESSC
T ss_pred CCHHHHHHHH-hcCCCEEEEeCc
Confidence 3456778887 889999999765
No 139
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=21.09 E-value=1.1e+02 Score=25.28 Aligned_cols=30 Identities=13% Similarity=0.167 Sum_probs=22.9
Q ss_pred eEEEEeecceeccCCCChHHHHHHHHHHhcCCc
Q psy11555 256 GVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQ 288 (484)
Q Consensus 256 ~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~ 288 (484)
..+|+++||+.. .+.+.++..++++++.+.
T Consensus 5 ~~v~i~LGSNlG---d~~~~l~~A~~~L~~~~~ 34 (161)
T 3qbc_A 5 IQAYLGLGSNIG---DRESQLNDAIKILNEYDG 34 (161)
T ss_dssp EEEEEEEEECSS---SHHHHHHHHHHHHHHSTT
T ss_pred cEEEEEEecCcc---CHHHHHHHHHHHHhcCCC
Confidence 479999999953 456778888888887654
No 140
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.86 E-value=94 Score=23.05 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=31.8
Q ss_pred cCCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhCC
Q psy11555 341 SGVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLGN 390 (484)
Q Consensus 341 ~gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~~ 390 (484)
..+|+|++ - .+.........+.|+--.+. +.++.++|.++|++++..
T Consensus 79 ~~~~ii~~-~-~~~~~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII-G-NPDGFAQHRKLKAHADEYVA-KPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE-E-CGGGHHHHHHSTTCCSEEEE-SSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE-e-cCCchhHHHHHHhCcchhee-CCCCHHHHHHHHHHHHcC
Confidence 46899988 3 33444555556667644443 466899999999988754
No 141
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=20.61 E-value=3e+02 Score=21.31 Aligned_cols=101 Identities=12% Similarity=0.239 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEecCCC----CCCCCCcEEEecc-cCcccccccCceeEEEecCCcchHHHHHh-----c
Q psy11555 272 PSDKRKAFLRAFEQIPQRVIWKWEGEN----MSGKIDKILLKSW-APQRDILDHPNVKVFISHGGFLGTTEALY-----S 341 (484)
Q Consensus 272 ~~~~~~~~~~a~~~~~~~~i~~~~~~~----~~~~~~nv~~~~~-~pq~~ll~h~~~~~~IthgG~~s~~Eal~-----~ 341 (484)
.......+.+.++..++.+.......+ +...+..+.+.++ +|..+ |. .+.+.+. .
T Consensus 16 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~--------------g~-~~~~~lr~~~~~~ 80 (154)
T 3gt7_A 16 SPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMD--------------GY-ALCRWLKGQPDLR 80 (154)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSC--------------HH-HHHHHHHHSTTTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCC--------------HH-HHHHHHHhCCCcC
Confidence 345556666677777776654432211 1222334444443 23221 11 2334333 4
Q ss_pred CCceeeccCCCchHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHHHhC
Q psy11555 342 GVPIIGIPMFGDQKANIRVVEKAGFGVTLPYDQITEETVLVALRTVLG 389 (484)
Q Consensus 342 gvP~i~~P~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 389 (484)
.+|+|++--..+.. ....+.+.|+--.+. +.++.++|.++|++++.
T Consensus 81 ~~pii~~s~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~ 126 (154)
T 3gt7_A 81 TIPVILLTILSDPR-DVVRSLECGADDFIT-KPCKDVVLASHVKRLLS 126 (154)
T ss_dssp TSCEEEEECCCSHH-HHHHHHHHCCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChH-HHHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHH
Confidence 67888875544443 344455566544443 45689999999998873
No 142
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=20.19 E-value=69 Score=28.05 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=26.3
Q ss_pred HHHHhhc-CCCccEEEEcccc--hhhHHHHH----HHhCCCEEEEeCCCC
Q psy11555 88 ALDLLHS-SKKYDLIITEVFN--TDCFLGFV----YKFKVPYIAVSAAHI 130 (484)
Q Consensus 88 l~~~l~~-~~~~DlvI~d~~~--~~~~~~~A----~~l~iP~i~~~~~~~ 130 (484)
+.+.++. ..+||++++|... .+-..++| ..+++|.|.+.-...
T Consensus 93 ~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~~l 142 (225)
T 2w36_A 93 FLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRL 142 (225)
T ss_dssp HHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESSCS
T ss_pred HHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEeccc
Confidence 4455542 3479999999752 12233344 445899998876543
No 143
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=20.07 E-value=3.7e+02 Score=22.18 Aligned_cols=139 Identities=13% Similarity=0.138 Sum_probs=72.1
Q ss_pred ceEEEEeecceeccCCCChHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcEEEecccCcccccccCceeEEEecCCcch
Q psy11555 255 NGVIYFSMGSIIQGKSFPSDKRKAFLRAFEQIPQRVIWKWEGENMSGKIDKILLKSWAPQRDILDHPNVKVFISHGGFLG 334 (484)
Q Consensus 255 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~nv~~~~~~pq~~ll~h~~~~~~IthgG~~s 334 (484)
++.|-|-+||. ......+...+.++.++..+-..+-+ ....|+.+ ..|... .....+++||.-+|.-.
T Consensus 6 ~~~V~IimgS~-----SD~~v~~~a~~~l~~~gi~~ev~V~S--aHR~p~~~--~~~~~~---a~~~g~~ViIa~AG~aa 73 (169)
T 3trh_A 6 KIFVAILMGSD-----SDLSTMETAFTELKSLGIPFEAHILS--AHRTPKET--VEFVEN---ADNRGCAVFIAAAGLAA 73 (169)
T ss_dssp CCEEEEEESCG-----GGHHHHHHHHHHHHHTTCCEEEEECC--TTTSHHHH--HHHHHH---HHHTTEEEEEEEECSSC
T ss_pred CCcEEEEECcH-----HhHHHHHHHHHHHHHcCCCEEEEEEc--ccCCHHHH--HHHHHH---HHhCCCcEEEEECChhh
Confidence 35677778887 23567888888888887654332221 11111110 111110 01145788998877543
Q ss_pred HHHHH---hcCCceeeccCCCchH--HHH-HHHHH--cCcEEE-ecCC---CCCHHHHHHHHHHHhCCHHHHHHHHHHHH
Q psy11555 335 TTEAL---YSGVPIIGIPMFGDQK--ANI-RVVEK--AGFGVT-LPYD---QITEETVLVALRTVLGNPSYKKRAEKVAR 402 (484)
Q Consensus 335 ~~Eal---~~gvP~i~~P~~~dQ~--~na-~~~~~--~G~g~~-l~~~---~~~~~~l~~ai~~~l~~~~~~~~a~~~~~ 402 (484)
-+-.+ ..-+|+|++|...... ..+ --+.+ .|+.+. +..+ ..+..-+...|. -+.|+.++++.+...+
T Consensus 74 ~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il-~~~d~~l~~kl~~~r~ 152 (169)
T 3trh_A 74 HLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQII-ALQDKSIAQKLVQQRT 152 (169)
T ss_dssp CHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred hhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 33322 2358999999853221 121 22233 355322 3222 112233333333 2468999999888877
Q ss_pred HHhC
Q psy11555 403 LFQD 406 (484)
Q Consensus 403 ~~~~ 406 (484)
..++
T Consensus 153 ~~~~ 156 (169)
T 3trh_A 153 AKRE 156 (169)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
Done!