Query psy11557
Match_columns 61
No_of_seqs 103 out of 384
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:32:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11557.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11557hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.4 9.6E-13 3.3E-17 75.5 6.2 51 5-57 8-58 (107)
2 3knb_A Titin; IG-like, titin, 99.3 5.8E-12 2E-16 71.2 4.4 47 9-57 4-50 (100)
3 2v5m_A Dscam; neurobiology SPL 99.2 1.8E-11 6.3E-16 79.4 6.0 51 9-59 2-52 (388)
4 3dmk_A DOWN syndrome cell adhe 99.2 3.1E-11 1.1E-15 85.5 5.6 54 7-60 35-88 (816)
5 1g1c_A Immunoglobulin-like dom 99.2 1E-10 3.6E-15 64.0 6.2 46 8-55 3-48 (99)
6 3qp3_A Titin; I-SET IG-like, s 99.1 2.1E-10 7.3E-15 63.2 6.1 47 8-56 6-52 (103)
7 2v9t_A Roundabout homolog 1; s 99.1 1.8E-10 6E-15 65.1 5.8 48 5-54 4-51 (117)
8 2cqv_A MLCK, myosin light chai 99.1 1.7E-10 5.9E-15 65.1 5.7 47 7-55 4-50 (114)
9 3caf_A Fibroblast growth facto 99.1 8.5E-11 2.9E-15 64.6 4.3 47 8-55 2-51 (100)
10 3kld_A Contactin 4, axcam, BIG 99.1 1.1E-10 3.7E-15 76.9 5.1 47 8-55 3-51 (384)
11 1wit_A Twitchin 18TH IGSF modu 99.1 2.3E-10 7.9E-15 62.5 5.6 43 10-54 2-46 (93)
12 2kdg_A Myotilin; immonoglobuli 99.1 2E-10 6.8E-15 63.0 5.3 47 8-56 3-49 (100)
13 1u2h_A APEG-1, aortic preferen 99.1 4.1E-10 1.4E-14 61.6 6.2 45 8-54 3-47 (99)
14 2edj_A Roundabout homolog 2; K 99.0 5.9E-10 2E-14 61.3 6.1 47 6-54 4-50 (100)
15 3puc_A Titin; I-SET IG-like do 99.0 6.4E-10 2.2E-14 60.6 6.1 46 8-55 4-49 (99)
16 2yr3_A Myosin light chain kina 99.0 4.2E-10 1.4E-14 61.8 5.2 47 6-54 7-53 (99)
17 3irg_B Obscurin-like protein 1 99.0 7.6E-10 2.6E-14 61.2 6.2 48 6-55 9-56 (107)
18 2dm3_A KIAA0992 protein, palla 99.0 3.4E-10 1.2E-14 63.1 4.6 48 5-54 4-51 (110)
19 2dm2_A Palladin; beta-sandwich 99.0 4.8E-10 1.6E-14 62.7 4.9 48 6-55 4-51 (110)
20 2e7c_A Myosin-binding protein 99.0 7.5E-10 2.6E-14 62.9 5.5 48 6-54 17-66 (118)
21 3bfo_A Mucosa-associated lymph 99.0 2.2E-09 7.5E-14 58.5 7.1 45 9-55 2-46 (91)
22 2cr6_A KIAA1556 protein, obscu 99.0 9.7E-10 3.3E-14 62.4 5.7 45 9-55 12-56 (115)
23 3irg_A Titin; IG-like, titin, 99.0 7E-10 2.4E-14 60.3 4.4 45 8-54 3-47 (100)
24 2lvc_A Obscurin-like protein 1 99.0 5.2E-10 1.8E-14 62.7 3.8 48 9-58 2-51 (91)
25 2eo9_A Roundabout homolog 1; b 99.0 6.1E-10 2.1E-14 63.1 4.1 47 6-54 4-50 (118)
26 2kkq_A Myotilin; unknown funct 99.0 6.9E-10 2.4E-14 63.5 4.3 46 7-54 12-57 (116)
27 1fhg_A Telokin; immunoglobulin 99.0 2.1E-09 7.2E-14 63.8 6.5 47 7-55 38-84 (154)
28 3qr2_A Basigin; CD147, EMMPRIN 99.0 1.1E-09 3.7E-14 63.6 5.0 43 7-51 18-60 (137)
29 2yuv_A Myosin-binding protein 98.9 2.5E-09 8.6E-14 59.1 5.8 46 8-55 5-50 (100)
30 2bk8_A Connectin, M1, titin he 98.9 3.3E-09 1.1E-13 58.1 6.0 42 13-55 3-45 (97)
31 1waa_A Titin; metal binding pr 98.9 2.8E-09 9.5E-14 59.5 5.8 46 8-56 3-48 (93)
32 1nct_A Titin; cell adhesion, g 98.9 9.3E-10 3.2E-14 62.1 3.2 47 7-55 11-57 (106)
33 2yd1_A Tyrosine-protein phosph 98.9 6.9E-09 2.4E-13 62.8 7.3 47 6-54 2-48 (212)
34 1pd6_A Cardiac MYBP-C;, myosin 98.9 1.7E-09 5.7E-14 61.3 4.3 47 7-55 12-58 (104)
35 2yd6_A PTPRD protein; hydrolas 98.9 4.1E-09 1.4E-13 64.0 6.1 47 6-54 2-48 (212)
36 2ckn_A Basic fibroblast growth 98.9 1.3E-09 4.6E-14 59.9 3.5 47 6-55 5-51 (95)
37 2edk_A Myosin-binding protein 98.9 3.1E-09 1.1E-13 58.8 4.9 49 6-57 4-52 (101)
38 2e6p_A Obscurin-like protein 1 98.9 1.5E-09 5E-14 60.2 3.6 47 7-55 4-52 (104)
39 3cx2_A Myosin-binding protein 98.9 2.9E-09 1E-13 59.8 4.8 40 9-49 3-45 (108)
40 3kvq_A Vascular endothelial gr 98.9 1E-09 3.6E-14 60.7 2.8 45 8-54 8-52 (108)
41 2j8h_A Titin, connectin; cardi 98.9 1E-08 3.5E-13 60.8 7.0 45 8-54 2-46 (197)
42 2dlt_A Myosin binding protein 98.9 4.5E-09 1.5E-13 58.6 5.1 47 6-55 4-50 (106)
43 2a38_A Titin; Z1Z2, structural 98.9 6.9E-09 2.3E-13 61.3 6.1 47 7-55 2-48 (194)
44 2vr9_A Roundabout 1, ROBO; imm 98.8 1.2E-08 4.1E-13 61.5 7.1 49 5-55 4-52 (217)
45 1cs6_A Axonin-1; neural cell a 98.8 4.1E-09 1.4E-13 68.3 5.2 48 8-56 2-51 (382)
46 2nzi_A Titin; IG-domain, FNIII 98.8 1.4E-08 4.7E-13 63.9 7.2 45 8-54 2-46 (305)
47 4fa8_A Secreted protein BARF1; 98.8 1.3E-09 4.5E-14 67.9 2.4 43 10-53 106-148 (203)
48 1x44_A Myosin-binding protein 98.8 4.5E-09 1.6E-13 58.3 4.3 47 8-57 4-51 (103)
49 2r15_A Myomesin-1; sarcomeric 98.8 1.8E-08 6.2E-13 60.2 6.9 45 10-55 116-160 (212)
50 2ens_A Advanced glycosylation 98.8 2.3E-09 8E-14 58.9 2.7 47 6-54 6-52 (96)
51 2e7b_A Obscurin; IG-like domai 98.8 4.9E-09 1.7E-13 57.9 3.9 45 7-54 5-49 (103)
52 2edf_A Obscurin; beta-sandwich 98.8 7.3E-09 2.5E-13 57.2 4.6 47 6-55 4-50 (103)
53 2yd9_A Receptor-type tyrosine- 98.8 9.5E-09 3.3E-13 65.0 5.7 46 6-53 2-47 (304)
54 3rbs_A Myomesin-1; immunoglobu 98.8 1.6E-08 5.6E-13 62.6 6.6 44 9-55 116-160 (207)
55 2c5d_C AXL oncogene, tyrosine- 98.8 1.2E-08 4E-13 60.8 5.6 45 9-55 1-46 (195)
56 3lcy_A Titin; A-BAND, IG tande 98.8 1.8E-08 6.2E-13 59.3 6.2 48 6-55 3-50 (197)
57 2yuz_A Myosin-binding protein 98.8 6.1E-09 2.1E-13 58.6 3.9 46 7-56 4-49 (100)
58 2iep_A Muscle-specific kinase 98.8 8.8E-09 3E-13 60.8 4.5 48 5-54 2-49 (192)
59 3b43_A Titin; I-SET IG fold, e 98.8 1.9E-08 6.5E-13 69.5 6.8 47 8-56 3-49 (570)
60 2rik_A Titin; I-SET IG fold, p 98.8 3E-08 1E-12 61.7 7.1 46 8-55 3-48 (284)
61 1itb_B Type 1 interleukin-1 re 98.8 1.5E-08 5.2E-13 64.1 5.8 48 8-56 206-253 (315)
62 3mtr_A N-CAM-1, NCAM-1, neural 98.8 2.2E-08 7.4E-13 60.9 6.2 46 7-55 16-61 (215)
63 2v9r_A Roundabout homolog 1; p 98.8 1.6E-08 5.6E-13 60.3 5.5 48 5-54 4-51 (212)
64 2lu7_A Obscurin-like protein 1 98.7 7.8E-09 2.7E-13 57.1 3.5 37 19-57 4-40 (84)
65 1gl4_B Basement membrane-speci 98.7 3.4E-08 1.2E-12 54.0 5.8 42 8-49 7-49 (98)
66 2y25_A Myomesin; structural pr 98.7 3.1E-08 1.1E-12 62.2 6.2 46 9-55 220-265 (317)
67 2cry_A KIN of IRRE-like protei 98.7 7.6E-09 2.6E-13 58.9 3.1 44 8-54 12-56 (122)
68 3so5_A LIG-3, leucine-rich rep 98.7 9.7E-08 3.3E-12 52.0 7.2 45 8-54 8-54 (112)
69 3kld_A Contactin 4, axcam, BIG 98.7 2.5E-08 8.7E-13 65.6 5.7 45 9-55 294-338 (384)
70 2v5t_A NCAM2, N-CAM 2, neural 98.7 4.5E-08 1.6E-12 57.4 5.9 43 10-54 2-44 (189)
71 3p3y_A Neurofascin; IG domains 98.7 1.9E-08 6.3E-13 65.1 4.6 48 6-54 12-59 (404)
72 1rhf_A Tyrosine-protein kinase 98.7 2.3E-08 8E-13 58.8 4.6 44 10-55 2-45 (182)
73 2eny_A Obscurin; beta-sandwich 98.7 9.3E-09 3.2E-13 57.9 2.6 47 8-56 6-53 (104)
74 2k1m_A Myosin-binding protein 98.7 3.3E-08 1.1E-12 54.2 4.5 44 9-55 7-50 (95)
75 1wwb_X Protein (brain derived 98.7 3.6E-08 1.2E-12 55.3 4.6 30 26-56 16-45 (103)
76 2yd6_A PTPRD protein; hydrolas 98.7 9.6E-08 3.3E-12 57.8 6.9 45 9-55 107-151 (212)
77 1gxe_A Myosin binding protein 98.6 1.6E-08 5.4E-13 60.6 3.2 32 18-49 25-56 (139)
78 2va4_A NCAM2, N-CAM 2, neural 98.6 4.6E-08 1.6E-12 57.5 5.2 45 10-55 2-47 (192)
79 3m45_A Cell adhesion molecule 98.6 4.2E-08 1.4E-12 53.7 4.7 42 8-50 4-45 (108)
80 4fqp_A Poliovirus receptor; im 98.6 4.9E-08 1.7E-12 62.1 5.5 44 9-53 215-259 (313)
81 3ojm_B Fibroblast growth facto 98.6 1.9E-08 6.6E-13 60.5 3.5 49 6-55 11-62 (231)
82 1he7_A High affinity nerve gro 98.6 3.2E-08 1.1E-12 59.3 4.4 32 26-58 15-46 (126)
83 1bih_A Hemolin; insect immunit 98.6 4.1E-08 1.4E-12 63.5 5.1 45 9-54 307-351 (395)
84 2c5d_C AXL oncogene, tyrosine- 98.6 1.2E-07 4E-12 56.4 6.8 45 9-55 105-150 (195)
85 1rhf_A Tyrosine-protein kinase 98.6 1.5E-07 5.2E-12 55.2 7.0 44 9-54 97-141 (182)
86 2dku_A KIAA1556 protein; beta- 98.6 2.7E-08 9.3E-13 54.9 3.5 45 8-55 6-50 (103)
87 3s97_C Contactin-1; carbonic a 98.6 8.2E-08 2.8E-12 56.6 5.7 45 8-54 111-155 (201)
88 2yd9_A Receptor-type tyrosine- 98.6 8E-08 2.7E-12 60.7 5.9 46 8-55 203-248 (304)
89 1epf_A NCAM, protein (neural c 98.6 9.9E-08 3.4E-12 56.3 5.9 44 9-54 99-142 (191)
90 3s35_X Vascular endothelial gr 98.6 1.1E-07 3.8E-12 53.6 5.7 41 10-50 7-49 (122)
91 2wv3_A Neuroplastin; igcam, me 98.6 1.4E-07 4.6E-12 56.1 6.2 45 9-54 91-136 (190)
92 2a38_A Titin; Z1Z2, structural 98.6 9.1E-08 3.1E-12 56.4 5.4 45 9-55 102-146 (194)
93 1vca_A VCAM-D1,2, human vascul 98.6 1.1E-07 3.7E-12 58.3 5.9 38 12-49 2-39 (202)
94 2edh_A Obscurin; structural ge 98.6 1.3E-07 4.6E-12 52.9 5.8 44 8-55 17-60 (113)
95 2e6q_A Obscurin-like protein 1 98.6 8.2E-08 2.8E-12 56.1 5.0 44 10-57 8-51 (112)
96 3grw_A Fibroblast growth facto 98.6 4.3E-08 1.5E-12 59.8 3.9 48 7-55 8-58 (241)
97 2cr3_A Basic fibroblast growth 98.6 2.6E-08 8.9E-13 55.1 2.6 36 17-54 9-44 (99)
98 2rik_A Titin; I-SET IG fold, p 98.6 1.9E-07 6.5E-12 58.1 6.8 46 9-55 97-142 (284)
99 1wwc_A Protein (NT-3 growth fa 98.6 5.5E-08 1.9E-12 55.0 3.9 42 9-55 7-48 (118)
100 2jll_A NCAM2, neural cell adhe 98.6 1.7E-07 5.7E-12 60.7 6.6 44 10-55 1-45 (389)
101 2yd1_A Tyrosine-protein phosph 98.6 1.7E-07 5.9E-12 56.6 6.0 44 10-55 110-153 (212)
102 3k0w_A Mucosa-associated lymph 98.6 2.2E-07 7.6E-12 56.7 6.5 46 7-54 15-60 (218)
103 3rbg_A Cytotoxic and regulator 98.6 6.6E-08 2.2E-12 55.4 3.9 41 13-53 3-43 (124)
104 2edn_A Myosin-binding protein 98.5 6.2E-08 2.1E-12 57.4 3.6 44 4-48 6-52 (118)
105 3k0w_A Mucosa-associated lymph 98.5 3.9E-07 1.3E-11 55.6 7.3 45 9-55 117-161 (218)
106 3p3y_A Neurofascin; IG domains 98.5 2.3E-07 8E-12 60.0 6.4 45 9-55 311-355 (404)
107 2y25_A Myomesin; structural pr 98.5 1.7E-07 6E-12 58.8 5.6 47 7-56 4-51 (317)
108 2v44_A NCAM2, neural cell adhe 98.5 1.3E-07 4.6E-12 55.8 4.8 43 10-54 96-138 (189)
109 2v5m_A Dscam; neurobiology SPL 98.5 2E-07 7E-12 60.2 6.0 44 10-55 307-350 (388)
110 2fbo_J V1V2;, variable region- 98.5 7.3E-08 2.5E-12 58.8 3.5 43 10-53 135-177 (250)
111 2cpc_A KIAA0657 protein; immun 98.5 2.4E-07 8.3E-12 51.6 5.4 48 6-55 6-55 (113)
112 2dm7_A KIAA1556 protein; beta- 98.5 9E-08 3.1E-12 53.1 3.6 44 7-54 5-48 (108)
113 2dav_A SLOW MYBP-C, myosin-bin 98.5 1.2E-07 4.1E-12 56.8 4.3 38 10-48 7-47 (126)
114 1epf_A NCAM, protein (neural c 98.5 3.3E-07 1.1E-11 54.0 6.2 44 10-54 2-46 (191)
115 3rjd_A High affinity immunoglo 98.5 2.9E-07 1E-11 56.3 5.9 43 10-54 1-44 (262)
116 2iep_A Muscle-specific kinase 98.5 2.5E-07 8.4E-12 54.5 5.3 44 10-55 100-143 (192)
117 1cs6_A Axonin-1; neural cell a 98.5 2.6E-07 9E-12 59.7 5.8 45 9-55 293-337 (382)
118 3b43_A Titin; I-SET IG fold, e 98.5 2.2E-07 7.5E-12 64.2 5.7 48 8-56 288-335 (570)
119 1qz1_A Neural cell adhesion mo 98.5 4.6E-07 1.6E-11 56.4 6.5 44 10-54 2-46 (291)
120 1bih_A Hemolin; insect immunit 98.5 1.4E-07 4.7E-12 61.0 4.2 46 8-55 4-50 (395)
121 2eo1_A OBSCN protein, cDNA FLJ 98.5 6.9E-08 2.4E-12 53.1 2.4 45 9-55 7-53 (102)
122 3grw_A Fibroblast growth facto 98.5 8.5E-07 2.9E-11 53.9 7.2 47 8-54 111-160 (241)
123 2id5_A Lingo-1, leucine rich r 98.4 9.9E-08 3.4E-12 64.4 3.2 46 6-51 380-425 (477)
124 3sgj_C Human FCG3A receptor; r 98.4 4.9E-07 1.7E-11 55.5 6.0 46 8-55 5-51 (204)
125 3nl4_L Antigen binding fragmen 98.4 2.9E-07 9.8E-12 55.4 4.7 45 8-54 112-157 (213)
126 2v5t_A NCAM2, N-CAM 2, neural 98.4 2.7E-07 9.3E-12 54.0 4.5 44 10-54 96-140 (189)
127 4hwu_A Fibroblast growth facto 98.4 2.9E-07 9.8E-12 50.1 4.2 37 16-55 6-42 (95)
128 2wv3_A Neuroplastin; igcam, me 98.4 6.4E-07 2.2E-11 53.1 5.9 44 9-55 2-48 (190)
129 1qz1_A Neural cell adhesion mo 98.4 7E-07 2.4E-11 55.5 6.2 44 9-54 99-142 (291)
130 3ry4_A Low affinity immunoglob 98.4 6.5E-07 2.2E-11 52.1 5.4 46 8-55 2-48 (170)
131 3sbw_C Programmed cell death 1 98.4 4.5E-07 1.5E-11 54.5 4.9 33 22-54 127-159 (222)
132 3laf_A Deleted in colorectal c 98.4 4.3E-07 1.5E-11 58.8 4.9 44 9-54 311-354 (403)
133 3qs7_E FL cytokine receptor; i 98.4 4.5E-07 1.5E-11 61.5 5.0 44 10-54 324-368 (423)
134 1nbq_A JAM, junctional adhesio 98.4 2.8E-07 9.6E-12 54.6 3.4 41 11-51 4-44 (209)
135 3p2t_A Leukocyte immunoglobuli 98.4 9.5E-07 3.3E-11 52.9 5.8 42 8-53 3-44 (196)
136 1fnl_A Low affinity immunoglob 98.4 7.9E-07 2.7E-11 52.6 5.3 46 7-54 4-50 (175)
137 2j8h_A Titin, connectin; cardi 98.4 5.6E-07 1.9E-11 53.2 4.6 35 20-55 113-147 (197)
138 3b5h_A Cervical EMMPRIN, HAB18 98.4 1.2E-06 4.1E-11 51.5 6.0 44 9-53 82-129 (184)
139 3u83_A Poliovirus receptor-rel 98.4 5.1E-07 1.7E-11 57.2 4.6 44 9-53 230-274 (331)
140 3zyj_A Leucine-rich repeat-con 98.3 9.4E-07 3.2E-11 59.5 6.1 48 5-54 336-383 (440)
141 3s97_C Contactin-1; carbonic a 98.3 2.3E-07 7.8E-12 54.7 2.7 44 9-53 6-51 (201)
142 1jhl_L IGG1-kappa D11.15 FV (l 98.3 6.9E-07 2.4E-11 49.9 4.6 36 13-49 4-39 (108)
143 4fom_A Poliovirus receptor-rel 98.3 1.5E-07 5.3E-12 59.4 2.0 43 8-50 209-252 (308)
144 2rgs_A I, IG gamma-2B heavy ch 98.3 3.5E-07 1.2E-11 56.3 3.5 46 7-53 6-56 (218)
145 3lcy_A Titin; A-BAND, IG tande 98.3 1E-06 3.6E-11 51.6 5.3 36 19-55 111-146 (197)
146 3laf_A Deleted in colorectal c 98.3 1.9E-06 6.5E-11 55.8 6.9 48 5-54 16-64 (403)
147 3ojm_B Fibroblast growth facto 98.3 1.2E-06 4.1E-11 52.5 5.5 45 9-53 116-163 (231)
148 3r08_E T-cell surface glycopro 98.3 3.6E-07 1.2E-11 51.3 2.9 34 17-54 6-39 (82)
149 2y23_A Myomesin; structural pr 98.3 6.5E-07 2.2E-11 56.0 4.4 46 10-56 106-152 (312)
150 1l6x_A Immunoglobulin gamma-1 98.3 6.4E-07 2.2E-11 54.5 4.3 43 11-54 2-49 (207)
151 2rgs_A I, IG gamma-2B heavy ch 98.3 1E-06 3.5E-11 54.2 5.1 46 7-54 114-161 (218)
152 3ejj_X Macrophage colony-stimu 98.3 2E-06 6.8E-11 53.4 6.4 44 9-54 185-229 (289)
153 1f97_A Junction adhesion molec 98.3 7.2E-07 2.5E-11 52.9 4.2 39 12-51 3-41 (212)
154 2pet_A Lutheran blood group gl 98.3 1.3E-06 4.6E-11 52.6 5.4 46 9-56 117-164 (231)
155 2v44_A NCAM2, neural cell adhe 98.3 1.8E-06 6.3E-11 50.8 5.9 42 12-55 4-45 (189)
156 2jll_A NCAM2, neural cell adhe 98.3 1.2E-06 4E-11 56.6 5.4 44 10-55 100-143 (389)
157 2y23_A Myomesin; structural pr 98.3 1.1E-06 3.9E-11 54.9 5.1 42 10-54 222-264 (312)
158 1ry7_B FGFR-3, fibroblast grow 98.3 2.8E-07 9.4E-12 58.7 2.3 45 9-53 220-267 (334)
159 2d3v_A Leukocyte immunoglobuli 98.3 1.7E-06 5.8E-11 51.9 5.6 42 8-53 3-44 (196)
160 2v9r_A Roundabout homolog 1; p 98.3 9.1E-07 3.1E-11 52.6 4.3 43 11-55 112-155 (212)
161 3rbs_A Myomesin-1; immunoglobu 98.3 7.2E-07 2.5E-11 55.1 3.9 44 10-56 3-47 (207)
162 2vr9_A Roundabout 1, ROBO; imm 98.3 8.3E-07 2.8E-11 53.3 4.0 43 10-54 108-151 (217)
163 3v2a_R Vascular endothelial gr 98.3 1E-07 3.6E-12 66.5 0.0 47 8-56 664-710 (772)
164 3nl4_L Antigen binding fragmen 98.3 1.5E-06 5E-11 52.2 5.0 37 11-48 2-38 (213)
165 2wim_A N-CAM 2, NCAM2, neural 98.3 1.5E-06 5E-11 54.0 5.1 45 9-55 3-47 (291)
166 3mjg_X Beta-type platelet-deri 98.3 8.8E-07 3E-11 55.3 4.0 38 9-47 180-217 (289)
167 2ifg_A High affinity nerve gro 98.3 9.2E-07 3.1E-11 57.6 4.3 44 7-51 155-198 (347)
168 2x1w_L Vascular endothelial gr 98.3 1.9E-06 6.5E-11 52.4 5.4 43 9-52 103-147 (213)
169 3uto_A Twitchin; kinase, muscl 98.3 2.4E-06 8.2E-11 60.7 6.7 47 8-56 480-526 (573)
170 2gi7_A GPVI protein; IG-like d 98.2 2.7E-06 9.2E-11 50.8 5.9 40 7-49 5-44 (184)
171 1e07_A Carcinoembryonic antige 98.2 1.4E-06 4.8E-11 60.2 5.2 43 11-55 560-602 (642)
172 3d9a_L Light chain of hyhel10 98.2 1.4E-06 4.9E-11 52.3 4.7 35 13-48 4-38 (213)
173 1bec_A 14.3.D T cell antigen r 98.2 1.1E-06 3.9E-11 54.4 4.2 44 10-54 120-165 (238)
174 4dzb_B Vbeta2 (MAIT T cell rec 98.2 4.5E-07 1.5E-11 55.8 2.3 45 10-55 124-170 (246)
175 2o26_X MAST/stem cell growth f 98.2 1.3E-06 4.6E-11 54.6 4.3 43 8-51 186-229 (290)
176 3tv3_L PGT128 light chain, IG 98.2 1.5E-06 5.3E-11 52.2 4.3 44 9-54 110-155 (211)
177 3mj8_L Stimulatory hamster ant 98.2 1.2E-06 4.2E-11 52.5 3.8 44 9-54 113-158 (213)
178 1ugn_A LIR1, leukocyte immunog 98.2 3.3E-06 1.1E-10 50.6 5.7 42 8-53 3-44 (198)
179 4i0k_A CD276 antigen; immunogl 98.2 2.6E-06 9E-11 51.2 5.2 43 10-54 111-154 (222)
180 1lk3_L 9D7 light chain; antige 98.2 1.5E-06 5.1E-11 52.3 4.0 43 10-54 111-155 (210)
181 2d3v_A Leukocyte immunoglobuli 98.2 1.5E-06 5.2E-11 52.2 3.9 40 10-53 100-139 (196)
182 1ow0_A IG alpha-1 chain C regi 98.2 2.1E-06 7.3E-11 52.6 4.5 46 8-54 104-151 (214)
183 1uct_A Immunoglobulin alpha FC 98.2 1.4E-06 4.7E-11 54.1 3.6 42 8-53 7-48 (218)
184 4frw_A Poliovirus receptor-rel 98.2 1.9E-06 6.4E-11 50.7 4.1 34 19-53 126-159 (218)
185 1f2q_A High affinity immunoglo 98.2 9.7E-07 3.3E-11 52.1 2.8 45 8-54 2-47 (176)
186 1c1e_H Catalytic antibody 1E9 98.2 1.3E-06 4.5E-11 52.9 3.4 42 9-52 123-166 (219)
187 2oz4_A Intercellular adhesion 98.2 2.9E-07 9.8E-12 57.4 0.4 33 18-50 192-224 (265)
188 1z7z_I Intercellular adhesion 98.2 4.5E-07 1.5E-11 60.0 1.4 42 9-51 367-409 (450)
189 1l6x_A Immunoglobulin gamma-1 98.2 3.5E-06 1.2E-10 51.1 5.3 45 8-54 107-153 (207)
190 3r06_A Anti-mouse CD3epsilon a 98.2 3.8E-06 1.3E-10 50.4 5.3 37 11-48 2-38 (213)
191 1hng_A CD2; T lymphocyte adhes 98.2 2.7E-06 9.4E-11 51.0 4.6 29 26-55 110-138 (176)
192 1i1c_A IGG2A, IG gamma-2A chai 98.2 1.5E-06 5.1E-11 54.8 3.6 43 9-51 14-61 (239)
193 3r4d_A CEA-related cell adhesi 98.2 6.1E-06 2.1E-10 49.0 6.1 41 10-55 112-152 (208)
194 3auv_A SC-DSFV derived from th 98.2 3.2E-06 1.1E-10 53.4 5.1 41 8-49 10-50 (276)
195 3bp6_B Programmed cell death 1 98.2 4.6E-06 1.6E-10 49.7 5.5 38 14-51 5-47 (202)
196 3d9a_L Light chain of hyhel10 98.1 1.6E-06 5.4E-11 52.1 3.4 44 10-55 112-157 (213)
197 2wim_A N-CAM 2, NCAM2, neural 98.1 1.8E-06 6.1E-11 53.6 3.8 44 10-55 98-141 (291)
198 2q20_A VK1 O18/O8 germline lig 98.1 3.3E-06 1.1E-10 47.3 4.5 38 11-49 4-41 (109)
199 3qs9_E FL cytokine receptor; i 98.1 2.3E-06 7.8E-11 59.7 4.6 45 10-55 324-369 (527)
200 3zyi_A Leucine-rich repeat-con 98.1 1.5E-06 5.2E-11 58.7 3.6 46 6-54 348-393 (452)
201 1z7z_I Intercellular adhesion 98.1 3.2E-06 1.1E-10 55.9 5.1 43 10-54 85-131 (450)
202 1nkr_A P58-CL42 KIR; inhibitor 98.1 3.5E-06 1.2E-10 50.8 4.9 41 8-52 6-46 (201)
203 2w59_A IGY FCU3-4; immunoglobu 98.1 1.4E-06 4.7E-11 54.2 3.1 43 9-53 11-57 (231)
204 3s96_B 3B5H10 FAB light chain; 98.1 1.8E-06 6.2E-11 51.8 3.5 45 9-55 120-166 (218)
205 2ghw_B Anti-SARS SCFV antibody 98.1 5.8E-06 2E-10 50.8 5.8 38 10-48 135-172 (247)
206 2xzc_L FAB A.17 light chain; i 98.1 1.7E-06 5.8E-11 52.3 3.3 44 9-54 113-158 (216)
207 1lk3_L 9D7 light chain; antige 98.1 4.4E-06 1.5E-10 50.2 5.2 31 18-48 7-37 (210)
208 2wng_A Tyrosine-protein phosph 98.1 3.1E-06 1.1E-10 54.0 4.6 37 12-49 5-42 (327)
209 2p1y_A Bispecific alpha/beta T 98.1 3.1E-06 1.1E-10 51.6 4.5 37 12-49 129-165 (238)
210 1hzh_H IGG, immunoglobulin hea 98.1 2.9E-06 9.9E-11 56.7 4.7 46 7-54 352-399 (457)
211 1dr9_A B7-1 (CD80), T lymphocy 98.1 2E-06 6.8E-11 51.3 3.5 29 25-54 120-149 (201)
212 2vol_A Murine IGG FC; FC, zinc 98.1 3.5E-06 1.2E-10 51.3 4.6 45 8-54 107-153 (207)
213 3esu_F Antibody 14B7* light ch 98.1 4.8E-06 1.6E-10 51.3 5.2 37 11-48 5-41 (250)
214 1q0x_L FAB 9B1, light chain; a 98.1 2.9E-06 9.8E-11 51.0 4.1 44 9-54 114-159 (212)
215 3q5y_A TCR N15 beta; IG, T cel 98.1 1.4E-06 4.8E-11 53.5 2.7 45 9-54 120-166 (240)
216 3r06_A Anti-mouse CD3epsilon a 98.1 3.5E-06 1.2E-10 50.5 4.4 45 8-54 110-156 (213)
217 2ec8_A MAST/stem cell growth f 98.1 4.5E-06 1.5E-10 56.4 5.4 46 9-55 309-357 (524)
218 2wng_A Tyrosine-protein phosph 98.1 3E-06 1E-10 54.0 4.2 43 8-54 220-264 (327)
219 3dmk_A DOWN syndrome cell adhe 98.1 1E-05 3.6E-10 57.3 7.3 46 8-55 427-472 (816)
220 1nbq_A JAM, junctional adhesio 98.1 2.3E-06 7.8E-11 50.6 3.4 33 22-55 118-151 (209)
221 2rcj_C Light chain; immunoglob 98.1 4.4E-06 1.5E-10 56.5 5.2 45 8-54 423-469 (523)
222 4ei6_B Vbeta16 XV19 type II na 98.1 1.6E-06 5.4E-11 53.3 2.7 45 10-55 123-169 (245)
223 1oll_A NK receptor; immune sys 98.1 1.1E-05 3.8E-10 48.2 6.4 42 8-53 2-43 (188)
224 2wqr_A IG epsilon chain C regi 98.1 3.3E-06 1.1E-10 54.1 4.4 45 10-54 112-160 (323)
225 1nfd_E H57 FAB; complex (immun 98.1 1E-06 3.4E-11 53.0 1.8 44 9-54 112-157 (212)
226 1e07_A Carcinoembryonic antige 98.1 3.8E-06 1.3E-10 58.1 4.9 35 19-54 389-423 (642)
227 1dee_B IGM RF 2A2; FAB-IBP com 98.1 4.7E-06 1.6E-10 51.2 4.8 31 24-54 139-171 (223)
228 2fbo_J V1V2;, variable region- 98.1 3.9E-06 1.3E-10 51.0 4.3 37 13-49 4-43 (250)
229 1f97_A Junction adhesion molec 98.1 2.9E-06 9.9E-11 50.2 3.6 32 22-54 115-148 (212)
230 3qs7_E FL cytokine receptor; i 98.1 5.1E-06 1.7E-10 56.3 5.2 39 11-50 49-87 (423)
231 3pl6_D MBP peptide / T-cell re 98.1 1.3E-06 4.4E-11 54.6 2.1 45 10-55 145-191 (268)
232 3qib_D 2B4 beta chain; IG doma 98.1 1.4E-06 4.7E-11 54.6 2.2 45 10-55 148-194 (270)
233 1z9m_A GAPA225; nectin-like, I 98.1 6.5E-06 2.2E-10 48.0 5.0 37 12-49 40-76 (145)
234 2va4_A NCAM2, N-CAM 2, neural 98.1 9.8E-06 3.3E-10 47.3 5.8 43 10-54 95-138 (192)
235 2vol_A Murine IGG FC; FC, zinc 98.1 3.9E-06 1.3E-10 51.1 4.1 40 12-53 4-48 (207)
236 2znx_A SCFV; fluorotryptohpan, 98.1 6.5E-06 2.2E-10 51.0 5.2 37 12-49 3-39 (242)
237 1q9r_B S25-2 FAB (IGG1K) heavy 98.1 2.9E-06 9.9E-11 51.6 3.5 43 9-53 126-170 (222)
238 2ny1_B T-cell surface glycopro 98.1 4.9E-06 1.7E-10 49.1 4.4 33 17-50 104-136 (184)
239 1qfw_M FV, antibody (anti beta 98.1 5.7E-06 1.9E-10 46.2 4.5 36 13-49 4-39 (108)
240 4dep_C Interleukin-1 receptor 98.1 1.4E-06 4.9E-11 55.8 2.1 45 10-55 224-273 (349)
241 1i8k_A Epidermal growth factor 98.1 5.5E-06 1.9E-10 46.2 4.4 36 13-49 4-39 (107)
242 3s96_B 3B5H10 FAB light chain; 98.1 6.1E-06 2.1E-10 49.5 4.7 36 11-48 2-38 (218)
243 3to4_D NKT vbeta2 (mouse varia 98.1 1.8E-06 6E-11 53.9 2.3 46 9-55 122-169 (253)
244 3sob_L Antibody light chain; b 98.0 7.8E-06 2.7E-10 49.5 5.1 39 9-48 23-61 (237)
245 2nzi_A Titin; IG-domain, FNIII 98.0 7.7E-06 2.6E-10 51.2 5.2 35 20-55 113-147 (305)
246 2wbj_D OB TCR; transmembrane, 98.0 1.2E-06 4E-11 55.6 1.5 44 10-54 149-194 (279)
247 1gsm_A Madcam-1, mucosal addre 98.0 9.6E-06 3.3E-10 51.8 5.7 36 13-49 8-46 (210)
248 3bqu_C 3H6 FAB light chain; be 98.0 2E-06 6.7E-11 52.4 2.4 41 8-49 21-61 (233)
249 3bp6_B Programmed cell death 1 98.0 3.1E-06 1.1E-10 50.5 3.2 28 23-50 115-142 (202)
250 4frw_A Poliovirus receptor-rel 98.0 4.4E-06 1.5E-10 49.1 3.8 33 17-49 5-40 (218)
251 1pz5_B Heavy chain of FAB (SYA 98.0 5.3E-06 1.8E-10 50.3 4.3 41 9-50 124-166 (220)
252 1uct_A Immunoglobulin alpha FC 98.0 8E-06 2.7E-10 50.6 5.2 42 9-53 105-146 (218)
253 4f80_A Butyrophilin subfamily 98.0 3.6E-06 1.2E-10 51.3 3.4 34 21-54 128-162 (226)
254 2xot_A Amphoterin-induced prot 98.0 3.7E-06 1.3E-10 55.6 3.7 35 18-53 253-287 (361)
255 1mqk_L Antibody 7E2 FV fragmen 98.0 7.6E-06 2.6E-10 47.0 4.6 36 13-49 4-39 (120)
256 1igt_B IGG2A intact antibody - 98.0 6.8E-06 2.3E-10 54.6 4.9 46 7-54 343-390 (444)
257 1oga_E TRBC1, T-cell receptor 98.0 2.4E-06 8.2E-11 53.4 2.6 44 10-54 122-167 (252)
258 3d9a_H Heavy chain of hyhel10 98.0 3.7E-06 1.3E-10 50.7 3.3 42 9-52 117-160 (210)
259 3b5h_A Cervical EMMPRIN, HAB18 98.0 6.2E-06 2.1E-10 48.4 4.1 32 23-55 10-43 (184)
260 1dn0_B IGM-kappa cold agglutin 98.0 1.1E-05 3.8E-10 50.0 5.5 30 25-54 139-171 (232)
261 3bkj_L WO2 IGG2A FAB fragment 98.0 9.5E-06 3.3E-10 50.3 5.1 40 9-49 33-77 (252)
262 3umt_A SCFV heavy chain and li 98.0 1.1E-05 3.8E-10 50.1 5.4 38 10-48 138-175 (256)
263 2rcj_C Light chain; immunoglob 98.0 9.1E-06 3.1E-10 54.9 5.3 44 9-54 113-158 (523)
264 2ifg_A High affinity nerve gro 98.0 5E-06 1.7E-10 54.1 3.8 30 25-55 260-289 (347)
265 4fmk_A Poliovirus receptor-rel 98.0 6.3E-06 2.1E-10 48.6 3.9 38 14-52 5-45 (225)
266 2e27_L Anti-ciguatoxin antibod 98.0 9.3E-06 3.2E-10 46.6 4.5 37 12-49 5-41 (119)
267 3sob_L Antibody light chain; b 98.0 4.6E-06 1.6E-10 50.5 3.3 45 8-54 133-179 (237)
268 2c1o_A IGK-C protein; FAB frag 98.0 1.1E-05 3.8E-10 49.7 5.1 38 10-48 38-80 (254)
269 3mj8_L Stimulatory hamster ant 98.0 5.2E-06 1.8E-10 49.7 3.5 34 12-47 3-36 (213)
270 3sgj_C Human FCG3A receptor; r 98.0 1.8E-05 6.3E-10 48.3 6.0 41 10-53 89-130 (204)
271 1fnl_A Low affinity immunoglob 98.0 2.5E-05 8.6E-10 46.0 6.4 31 22-53 99-130 (175)
272 3nfj_J T cell receptor beta ch 98.0 2.8E-06 9.6E-11 52.3 2.2 45 10-55 123-169 (245)
273 2jju_A Signal regulatory prote 98.0 1.2E-05 4E-10 46.3 4.7 36 15-50 7-43 (127)
274 1nqb_A Single-chain antibody f 98.0 1.3E-05 4.5E-10 50.3 5.3 40 11-51 122-167 (256)
275 2yz1_A Tyrosine-protein phosph 98.0 1.3E-05 4.4E-10 45.2 4.7 38 12-50 9-47 (120)
276 3qs9_E FL cytokine receptor; i 98.0 8.5E-06 2.9E-10 56.8 4.7 36 17-53 233-269 (527)
277 1iga_A IGA1; immunoglobulin; N 98.0 9.9E-06 3.4E-10 54.6 4.9 46 8-54 347-394 (475)
278 3bqu_C 3H6 FAB light chain; be 98.0 3.4E-06 1.2E-10 51.3 2.3 43 10-54 134-178 (233)
279 1nkr_A P58-CL42 KIR; inhibitor 98.0 1.4E-05 4.9E-10 48.1 5.1 41 9-53 107-147 (201)
280 1ugn_A LIR1, leukocyte immunog 98.0 1.6E-05 5.6E-10 47.5 5.3 40 10-53 101-140 (198)
281 3pv7_A B7-H6, IG-like domain-c 98.0 8.6E-06 2.9E-10 50.1 4.1 39 11-49 3-46 (248)
282 2oz4_A Intercellular adhesion 98.0 1.4E-05 4.9E-10 49.6 5.2 42 8-54 4-48 (265)
283 1i1r_A GP130, interleukin-6 re 98.0 5.8E-06 2E-10 52.8 3.4 38 15-54 9-53 (303)
284 1i3g_L Antibody FV fragment; a 97.9 2.1E-05 7.3E-10 44.1 5.3 38 11-49 5-42 (111)
285 3vh8_G Killer cell immunoglobu 97.9 1.3E-05 4.5E-10 50.9 4.9 42 7-52 21-62 (316)
286 1i1c_A IGG2A, IG gamma-2A chai 97.9 1.5E-05 5E-10 50.2 5.1 46 7-54 120-167 (239)
287 3o4o_C Interleukin-1 receptor 97.9 5.3E-06 1.8E-10 52.9 3.0 43 8-52 16-65 (339)
288 4f80_A Butyrophilin subfamily 97.9 2.7E-05 9.1E-10 47.3 6.1 37 13-49 5-45 (226)
289 1ry7_B FGFR-3, fibroblast grow 97.9 9E-06 3.1E-10 51.6 4.1 34 21-55 133-166 (334)
290 2wqr_A IG epsilon chain C regi 97.9 1.1E-05 3.6E-10 51.7 4.4 44 9-54 218-263 (323)
291 4dzb_B Vbeta2 (MAIT T cell rec 97.9 1.6E-05 5.5E-10 48.8 5.1 36 11-47 2-37 (246)
292 1moe_A Anti-CEA MAB T84.66; an 97.9 7.8E-06 2.7E-10 49.9 3.6 37 12-49 3-43 (240)
293 2j6e_L IGM, FAB light chain; a 97.9 3.2E-06 1.1E-10 51.3 1.8 44 9-54 134-179 (234)
294 1f2q_A High affinity immunoglo 97.9 1.4E-05 4.8E-10 47.0 4.5 31 23-54 97-128 (176)
295 2v5y_A Receptor-type tyrosine- 97.9 1.3E-05 4.3E-10 57.0 5.0 43 9-53 164-208 (731)
296 1qok_A MFE-23 recombinant anti 97.9 1.3E-05 4.5E-10 50.9 4.6 37 10-48 162-198 (282)
297 2ywz_A NEW antigen receptor va 97.9 3.2E-05 1.1E-09 43.4 5.8 36 12-48 2-39 (111)
298 2o26_X MAST/stem cell growth f 97.9 7.8E-06 2.7E-10 51.1 3.4 37 18-55 98-135 (290)
299 2w59_A IGY FCU3-4; immunoglobu 97.9 1.3E-05 4.6E-10 49.7 4.4 44 9-54 117-162 (231)
300 1nfd_E H57 FAB; complex (immun 97.9 7.9E-06 2.7E-10 49.0 3.2 31 18-48 6-36 (212)
301 2gi7_A GPVI protein; IG-like d 97.9 1.7E-05 5.8E-10 47.3 4.7 41 9-53 93-133 (184)
302 1c1e_H Catalytic antibody 1E9 97.9 1.5E-05 5E-10 48.2 4.4 37 14-51 4-43 (219)
303 1q0x_L FAB 9B1, light chain; a 97.9 1.1E-05 3.9E-10 48.3 3.8 35 13-49 4-41 (212)
304 3juy_B 3B3 single chain varian 97.9 3E-05 1E-09 48.1 5.8 38 10-48 149-187 (256)
305 3bkj_L WO2 IGG2A FAB fragment 97.9 6.7E-06 2.3E-10 51.0 2.7 43 10-54 150-194 (252)
306 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.9 1.7E-05 5.7E-10 49.5 4.5 36 12-48 5-40 (256)
307 1f3r_B FV antibody fragment; I 97.9 7.1E-06 2.4E-10 51.2 2.7 36 12-48 141-176 (257)
308 3nfj_J T cell receptor beta ch 97.9 1.9E-05 6.7E-10 48.5 4.6 34 13-47 4-37 (245)
309 3jz7_A MCAR, CAR, coxsackievir 97.9 6.4E-06 2.2E-10 48.6 2.3 27 23-49 133-160 (214)
310 2ec8_A MAST/stem cell growth f 97.9 2.7E-05 9.1E-10 52.6 5.6 43 8-52 209-252 (524)
311 3ry4_A Low affinity immunoglob 97.9 3.7E-05 1.3E-09 44.5 5.6 32 22-54 96-128 (170)
312 1za6_B IGG heavy chain; immuno 97.9 1.4E-05 4.7E-10 51.7 4.0 45 8-54 240-286 (344)
313 3omz_A Human vdelta1 gamma del 97.9 9.9E-06 3.4E-10 50.4 3.2 37 10-47 2-38 (259)
314 2c1o_A IGK-C protein; FAB frag 97.9 8.8E-06 3E-10 50.2 2.9 43 10-54 154-198 (254)
315 1c5d_H Monoclonal antibody aga 97.9 1.2E-05 4E-10 49.0 3.4 41 10-52 122-164 (215)
316 2d9c_A Signal-regulatory prote 97.8 2.4E-05 8.1E-10 45.2 4.5 37 14-50 11-48 (136)
317 1qgc_4 Protein (immunoglobulin 97.8 1.3E-05 4.6E-10 52.5 3.8 44 10-55 116-161 (438)
318 1qgc_4 Protein (immunoglobulin 97.8 1.2E-05 4E-10 52.8 3.5 44 9-54 342-387 (438)
319 1svz_A Immunoglobulin;, single 97.8 2E-05 6.7E-10 48.5 4.3 37 12-49 3-44 (247)
320 3oq3_B IFN-alpha/beta binding 97.8 5.7E-06 2E-10 53.1 2.0 30 23-53 140-170 (329)
321 2ny1_B T-cell surface glycopro 97.8 1.8E-05 6E-10 46.6 3.9 31 20-50 4-34 (184)
322 1h5b_A Murine T cell receptor 97.8 2.8E-05 9.5E-10 43.6 4.5 35 13-49 4-38 (113)
323 1igt_B IGG2A intact antibody - 97.8 2.6E-05 8.8E-10 51.8 5.1 44 10-54 238-286 (444)
324 3pv7_A B7-H6, IG-like domain-c 97.8 1.7E-05 5.7E-10 48.8 3.8 39 10-51 119-159 (248)
325 2if7_A SLAM family member 6; N 97.8 3.6E-05 1.2E-09 46.4 5.2 28 25-53 122-151 (193)
326 1hzh_H IGG, immunoglobulin hea 97.8 1.8E-05 6.1E-10 52.8 4.1 43 10-54 247-295 (457)
327 4hwn_A FC receptor-like A; FCR 97.8 4.5E-05 1.6E-09 43.0 5.2 43 8-53 6-53 (108)
328 1oll_A NK receptor; immune sys 97.8 2.1E-05 7.3E-10 47.0 4.1 40 10-53 99-138 (188)
329 2vsd_A CHIR AB1; immune system 97.8 3.3E-05 1.1E-09 43.3 4.5 42 8-53 3-44 (105)
330 3mj6_A Junctional adhesion mol 97.8 1.7E-05 6E-10 48.8 3.5 35 17-51 124-161 (268)
331 2x1w_L Vascular endothelial gr 97.8 9.6E-06 3.3E-10 49.3 2.3 36 18-54 14-53 (213)
332 1op3_H FAB 2G12, heavy chain; 97.8 1.4E-05 4.6E-10 49.1 3.0 28 24-52 141-170 (225)
333 3o4o_C Interleukin-1 receptor 97.8 9.4E-06 3.2E-10 51.7 2.3 44 9-54 225-272 (339)
334 3oq3_B IFN-alpha/beta binding 97.8 5.7E-05 2E-09 48.4 6.0 35 18-53 235-273 (329)
335 1x9q_A SCFV, 4M5.3 anti-fluore 97.8 2.9E-05 9.9E-10 48.7 4.4 43 6-49 11-58 (268)
336 2wbj_D OB TCR; transmembrane, 97.8 3.4E-05 1.2E-09 48.7 4.8 40 9-49 23-62 (279)
337 2p1y_A Bispecific alpha/beta T 97.8 4.3E-05 1.5E-09 46.5 5.0 35 12-48 2-36 (238)
338 2znx_A SCFV; fluorotryptohpan, 97.8 3E-05 1E-09 48.0 4.3 37 11-48 123-161 (242)
339 3bae_H WO2 IGG2A FAB fragment 97.8 1.9E-05 6.6E-10 48.5 3.4 42 9-52 129-172 (228)
340 1svz_A Immunoglobulin;, single 97.8 3.7E-05 1.3E-09 47.2 4.7 39 10-49 127-167 (247)
341 1igy_B IGG1 intact antibody MA 97.8 2E-05 6.7E-10 52.3 3.6 45 8-54 334-380 (434)
342 2ghw_B Anti-SARS SCFV antibody 97.8 2E-05 7E-10 48.3 3.4 28 21-48 12-41 (247)
343 3eow_R Poliovirus receptor; im 97.8 2.2E-05 7.6E-10 47.4 3.5 37 10-48 116-154 (221)
344 1bii_B Beta-2 microglobulin, M 97.8 6.6E-05 2.2E-09 44.1 5.4 46 6-54 20-67 (119)
345 1lk2_B Beta-2-microglobulin; c 97.7 6.5E-05 2.2E-09 42.4 5.2 43 9-54 3-47 (99)
346 3gkz_A Anti-methamphetamine si 97.7 5.9E-05 2E-09 46.7 5.4 38 10-48 141-179 (257)
347 3rjd_A High affinity immunoglo 97.7 5.7E-05 1.9E-09 46.0 5.2 40 13-54 85-125 (262)
348 3sbw_C Programmed cell death 1 97.7 5.4E-05 1.8E-09 45.3 5.0 34 15-48 5-43 (222)
349 3p2t_A Leukocyte immunoglobuli 97.7 3.6E-05 1.2E-09 45.9 4.2 41 9-53 99-139 (196)
350 4dep_C Interleukin-1 receptor 97.7 2.9E-05 9.8E-10 49.6 4.0 40 10-49 6-56 (349)
351 2fbj_H IGA-kappa J539 FAB (hea 97.7 2E-05 6.8E-10 48.3 3.1 42 9-53 122-166 (220)
352 3uzq_A Anti-dengue MAB 4E11; d 97.7 3.6E-05 1.2E-09 47.7 4.3 38 10-48 133-174 (253)
353 2ocw_A Polymeric-immunoglobuli 97.7 3.1E-05 1.1E-09 52.7 4.2 34 19-53 450-487 (585)
354 2gjj_A A21 single-chain antibo 97.7 3.7E-05 1.3E-09 48.5 4.4 39 9-48 4-48 (264)
355 1sy6_A T-cell surface glycopro 97.7 3.8E-05 1.3E-09 47.0 4.3 39 11-54 115-153 (204)
356 1k5n_B Beta-2-microglobulin, l 97.7 9E-05 3.1E-09 41.9 5.6 43 9-54 4-48 (100)
357 4acp_A IG gamma-1 chain C regi 97.7 3.7E-05 1.3E-09 48.9 4.3 43 10-54 23-70 (240)
358 2d9q_B Granulocyte colony-stim 97.7 1.8E-05 6.3E-10 50.7 2.9 32 21-53 10-46 (313)
359 4fa8_A Secreted protein BARF1; 97.7 1.2E-05 4.3E-10 49.7 2.0 29 21-50 3-34 (203)
360 3ejj_X Macrophage colony-stimu 97.7 2.2E-05 7.4E-10 48.6 3.0 41 13-54 92-133 (289)
361 3m8o_H Immunoglobulin A1 heavy 97.7 3.3E-05 1.1E-09 46.9 3.8 42 9-53 123-167 (221)
362 1vca_A VCAM-D1,2, human vascul 97.7 1.6E-05 5.5E-10 48.5 2.3 31 23-54 103-136 (202)
363 3auv_A SC-DSFV derived from th 97.7 2.9E-05 9.9E-10 49.0 3.6 38 11-49 135-174 (276)
364 1u3h_A T-cell receptor alpha-c 96.9 5.3E-06 1.8E-10 46.6 0.0 35 14-49 3-37 (110)
365 1moe_A Anti-CEA MAB T84.66; an 97.7 4.3E-05 1.5E-09 46.5 4.1 37 11-48 120-158 (240)
366 1ccz_A Protein (CD58); LFA-3, 97.7 3E-05 1E-09 46.4 3.3 26 29-55 108-133 (171)
367 1j05_L T84.66 antibody, anti-C 97.7 3.5E-05 1.2E-09 43.0 3.4 35 13-48 4-42 (111)
368 1sq2_N Novel antigen receptor; 97.7 6.8E-05 2.3E-09 42.4 4.6 35 13-48 3-39 (113)
369 4acp_A IG gamma-1 chain C regi 97.7 6.6E-05 2.3E-09 47.7 5.1 46 7-54 127-174 (240)
370 2pet_A Lutheran blood group gl 97.7 1.8E-05 6.1E-10 47.6 2.3 34 17-50 6-40 (231)
371 1mju_H Immunoglobulin MS6-12; 97.7 3.4E-05 1.2E-09 47.5 3.6 42 9-52 120-163 (227)
372 1zvo_C Myeloma immunoglobulin 97.7 6E-05 2.1E-09 51.8 5.2 45 9-54 295-341 (512)
373 2zg1_A Sialic acid-binding IG- 97.7 3.9E-05 1.3E-09 45.8 3.7 37 13-49 2-45 (214)
374 1gsm_A Madcam-1, mucosal addre 97.7 9.6E-05 3.3E-09 47.1 5.7 29 25-55 109-142 (210)
375 1sy6_A T-cell surface glycopro 97.7 3.4E-05 1.2E-09 47.2 3.3 27 24-54 16-42 (204)
376 1p6f_A NKP46, natural cytotoxi 97.7 0.00016 5.4E-09 45.7 6.5 43 7-53 4-46 (242)
377 3esu_F Antibody 14B7* light ch 97.7 5.5E-05 1.9E-09 46.4 4.2 38 10-48 131-170 (250)
378 1pko_A Myelin oligodendrocyte 97.6 0.00016 5.5E-09 41.4 5.9 37 13-49 8-47 (139)
379 1jbj_A CD3 epsilon and gamma e 97.6 3E-05 1E-09 46.5 2.9 26 25-54 121-146 (186)
380 1hnf_A CD2; T lymphocyte adhes 97.6 3.9E-05 1.3E-09 46.9 3.2 26 27-53 116-141 (182)
381 2zg1_A Sialic acid-binding IG- 97.6 5.8E-05 2E-09 45.0 3.9 27 23-49 135-165 (214)
382 1jbj_A CD3 epsilon and gamma e 97.6 4.1E-05 1.4E-09 45.9 3.3 34 18-55 7-40 (186)
383 4dkd_C Macrophage colony-stimu 97.6 2.9E-05 9.9E-10 48.1 2.6 40 13-54 92-133 (292)
384 3uzq_A Anti-dengue MAB 4E11; d 97.6 9E-05 3.1E-09 45.9 4.8 34 13-47 4-39 (253)
385 3gkz_A Anti-methamphetamine si 97.6 0.0001 3.5E-09 45.6 5.1 40 8-48 6-47 (257)
386 1eeq_A Kappa-4 immunoglobulin 97.6 6.1E-05 2.1E-09 42.3 3.7 36 13-49 4-45 (114)
387 1nez_G T-cell surface glycopro 97.6 0.00015 5.2E-09 42.3 5.5 39 9-48 3-41 (128)
388 3gbl_A BETA2-microglobulin; im 97.6 0.0002 7E-09 40.3 5.8 29 25-54 17-47 (97)
389 2coq_A NEW antigen receptor va 97.6 7.7E-05 2.6E-09 41.6 3.9 35 13-48 3-39 (108)
390 1wio_A CD4, T-cell surface gly 97.6 4.9E-05 1.7E-09 49.1 3.5 30 21-50 4-33 (363)
391 3juy_B 3B3 single chain varian 97.6 5.5E-05 1.9E-09 46.9 3.6 38 10-48 6-45 (256)
392 2ptt_A CD48 antigen; CD244, CD 97.6 9E-05 3.1E-09 41.1 4.1 35 17-51 9-44 (110)
393 1mju_H Immunoglobulin MS6-12; 97.6 0.00011 3.8E-09 45.2 4.8 35 14-49 4-40 (227)
394 2gki_A Nuclease; anti-DNA anti 97.6 6.5E-05 2.2E-09 48.0 3.8 38 11-49 160-203 (291)
395 1nqb_A Single-chain antibody f 97.6 6.9E-05 2.4E-09 47.0 3.9 34 14-48 4-39 (256)
396 2yc1_B Single chain antibody f 97.6 0.00011 3.9E-09 44.0 4.7 38 11-49 17-54 (146)
397 2aty_A Complement receptor chi 97.6 9.5E-05 3.3E-09 49.1 4.7 45 8-54 272-318 (376)
398 4ei6_B Vbeta16 XV19 type II na 97.6 0.00012 4E-09 44.8 4.7 35 11-47 3-37 (245)
399 4fom_A Poliovirus receptor-rel 97.6 6.1E-05 2.1E-09 47.3 3.5 35 18-53 121-156 (308)
400 1za6_B IGG heavy chain; immuno 97.6 8.7E-05 3E-09 47.9 4.3 35 14-49 4-40 (344)
401 2dru_A Chimera of CD48 antigen 97.6 7.7E-05 2.6E-09 45.0 3.9 27 26-54 115-142 (180)
402 1hxm_B Gamma-delta T-cell rece 97.6 4E-05 1.4E-09 47.5 2.6 30 24-53 145-176 (242)
403 4ffy_L DENV1-E111 single chain 97.6 7.2E-05 2.5E-09 42.9 3.6 36 12-48 3-42 (126)
404 1itb_B Type 1 interleukin-1 re 97.6 5E-05 1.7E-09 47.7 3.1 32 22-54 114-151 (315)
405 3ux9_B SCFV antibody; five hel 97.6 0.00011 3.8E-09 45.3 4.6 34 14-48 138-173 (256)
406 1xt5_A Variable region-contain 97.6 0.00014 4.9E-09 41.1 4.7 36 15-50 8-46 (135)
407 1ypz_F T-cell receptor gamma c 97.5 1.9E-05 6.4E-10 48.9 1.0 30 25-54 144-175 (230)
408 1dlf_L Anti-dansyl immunoglobu 97.5 0.00013 4.4E-09 40.9 4.4 36 13-49 4-44 (113)
409 3p73_B Beta-2-microglobulin; I 97.5 0.00026 8.8E-09 40.0 5.7 43 9-54 3-47 (99)
410 2z35_A T-cell receptor alpha-c 97.5 0.00013 4.6E-09 40.7 4.4 35 14-49 4-38 (112)
411 1f3r_B FV antibody fragment; I 97.5 3.9E-05 1.3E-09 47.8 2.4 33 15-48 5-39 (257)
412 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.5 0.00014 4.8E-09 45.2 4.9 38 9-48 136-173 (256)
413 1qok_A MFE-23 recombinant anti 97.5 0.00012 4.1E-09 46.3 4.7 37 12-49 28-66 (282)
414 3o3u_N Maltose-binding peripla 97.5 0.00016 5.3E-09 49.5 5.5 26 29-55 490-516 (581)
415 2r15_A Myomesin-1; sarcomeric 97.5 7.2E-05 2.5E-09 44.3 3.4 31 25-56 16-47 (212)
416 1igy_B IGG1 intact antibody MA 97.5 6.6E-05 2.3E-09 49.8 3.4 41 10-52 119-161 (434)
417 2gki_A Nuclease; anti-DNA anti 97.5 0.00014 4.9E-09 46.4 4.8 35 13-48 25-61 (291)
418 3c5j_A HLA class II histocompa 97.5 0.00025 8.5E-09 43.8 5.7 43 9-54 85-129 (181)
419 1wio_A CD4, T-cell surface gly 97.5 8.3E-05 2.8E-09 48.0 3.6 29 23-51 108-136 (363)
420 1xau_A B- and T-lymphocyte att 97.5 0.00012 4.1E-09 44.2 3.9 33 19-51 22-55 (122)
421 1n26_A IL-6 receptor alpha cha 97.5 8.7E-05 3E-09 48.1 3.5 36 16-51 11-47 (325)
422 3ux9_B SCFV antibody; five hel 97.5 8.3E-05 2.9E-09 45.9 3.3 33 15-48 7-41 (256)
423 3c5j_B MHC class II antigen; H 97.5 0.00015 5.2E-09 44.5 4.5 43 9-54 95-139 (190)
424 3omz_A Human vdelta1 gamma del 97.5 0.00015 5.2E-09 44.9 4.5 38 10-48 136-174 (259)
425 1b6u_A KIR2DL3, P58 killer cel 97.5 0.00014 4.9E-09 46.5 4.5 41 9-53 106-146 (257)
426 1b6u_A KIR2DL3, P58 killer cel 97.5 0.0001 3.6E-09 47.1 3.8 40 8-51 5-44 (257)
427 1hxm_B Gamma-delta T-cell rece 97.5 0.0002 6.9E-09 44.3 5.0 37 12-49 3-41 (242)
428 3mj6_A Junctional adhesion mol 97.5 5.6E-05 1.9E-09 46.5 2.4 39 11-50 6-47 (268)
429 1op3_H FAB 2G12, heavy chain; 97.5 0.00014 4.7E-09 44.5 4.1 35 14-49 4-40 (225)
430 3to4_D NKT vbeta2 (mouse varia 97.4 9.4E-05 3.2E-09 46.0 3.3 31 17-47 7-37 (253)
431 3moq_A NEW antigen receptor va 97.4 0.00022 7.5E-09 41.8 4.7 35 13-48 3-39 (126)
432 2fbj_H IGA-kappa J539 FAB (hea 97.4 0.00016 5.6E-09 44.1 4.3 35 14-49 4-40 (220)
433 3jz7_A MCAR, CAR, coxsackievir 97.4 7.3E-05 2.5E-09 44.0 2.6 33 16-48 5-41 (214)
434 2aty_A Complement receptor chi 97.4 0.00017 5.9E-09 47.9 4.7 40 12-51 169-212 (376)
435 1uvq_B HLA class II histocompa 97.4 0.00021 7E-09 44.3 4.8 43 9-54 93-137 (198)
436 3q5y_A TCR N15 beta; IG, T cel 97.4 0.0002 6.8E-09 43.7 4.6 34 12-47 4-37 (240)
437 3khq_A B-cell antigen receptor 97.4 0.00019 6.6E-09 41.9 4.3 35 11-48 18-52 (133)
438 4fqp_A Poliovirus receptor; im 97.4 0.00013 4.5E-09 46.1 3.8 36 12-48 2-42 (313)
439 2xqy_G A13-D6.3 monoclonal ant 97.4 0.00011 3.7E-09 46.8 3.5 42 10-53 129-172 (261)
440 1q9r_B S25-2 FAB (IGG1K) heavy 97.4 0.00014 4.9E-09 43.9 3.9 35 14-49 4-40 (222)
441 3nl4_H Antigen binding fragmen 97.4 7.2E-05 2.5E-09 45.2 2.5 41 9-51 119-161 (215)
442 3noi_A Natural cytotoxicity tr 97.4 0.00015 5E-09 41.1 3.7 39 10-49 7-49 (120)
443 4dkd_C Macrophage colony-stimu 97.4 0.00015 5.1E-09 44.9 4.0 43 9-53 185-228 (292)
444 1fo0_B Protein (BM3.3 T cell r 97.4 0.00025 8.7E-09 39.8 4.7 36 13-49 4-39 (112)
445 3o81_A Beta-2-microglobulin; I 97.4 0.00041 1.4E-08 40.6 5.7 46 6-54 20-67 (119)
446 1fo0_A Protein (BM3.3 T cell r 97.4 0.00025 8.5E-09 39.9 4.6 32 17-48 6-38 (116)
447 3u83_A Poliovirus receptor-rel 97.4 4.1E-05 1.4E-09 48.3 1.4 40 9-48 12-55 (331)
448 1pz5_B Heavy chain of FAB (SYA 97.4 0.00023 7.8E-09 43.0 4.6 35 14-49 4-40 (220)
449 2ocw_A Polymeric-immunoglobuli 97.4 0.00017 5.9E-09 49.0 4.4 41 10-51 331-376 (585)
450 2if7_A SLAM family member 6; N 97.4 0.00016 5.5E-09 43.5 3.9 35 18-53 5-40 (193)
451 2gjj_A A21 single-chain antibo 97.4 0.00018 6.1E-09 45.3 4.1 35 14-49 142-178 (264)
452 3r4d_A CEA-related cell adhesi 97.4 0.00015 5.2E-09 42.9 3.5 28 22-49 10-37 (208)
453 2xqy_G A13-D6.3 monoclonal ant 97.4 0.0002 6.7E-09 45.5 4.2 37 12-49 8-46 (261)
454 1uvq_A HLA class II histocompa 97.4 0.00041 1.4E-08 43.5 5.7 43 9-54 88-132 (197)
455 3jts_B Beta-2-microglobulin; a 97.4 0.00044 1.5E-08 40.5 5.5 45 6-53 20-66 (119)
456 3d9a_H Heavy chain of hyhel10 97.4 0.00011 3.9E-09 44.0 3.0 33 15-48 5-39 (210)
457 3vh8_G Killer cell immunoglobu 97.4 0.00032 1.1E-08 44.4 5.2 41 9-53 218-258 (316)
458 3liz_H 4C3 monoclonal antibody 97.4 0.0002 6.7E-09 44.7 4.1 41 9-51 123-165 (253)
459 3udw_C Poliovirus receptor; PV 97.4 0.00033 1.1E-08 38.2 4.5 34 14-48 4-42 (118)
460 3umt_A SCFV heavy chain and li 97.4 0.00019 6.6E-09 44.4 3.9 34 14-48 6-41 (256)
461 1pew_A JTO2, A lambda-6 type i 97.4 0.00021 7.3E-09 39.7 3.7 32 18-49 7-40 (109)
462 1ow0_A IG alpha-1 chain C regi 97.3 1.6E-05 5.5E-10 48.6 -1.3 33 12-45 6-41 (214)
463 1tvd_A T cell receptor, ES204 97.3 0.00032 1.1E-08 39.3 4.2 36 13-49 3-39 (116)
464 3bn9_D E2 FAB heavy chain; ant 97.3 4.7E-05 1.6E-09 48.6 0.7 41 10-52 133-175 (257)
465 2atp_B T-cell surface glycopro 97.3 0.00032 1.1E-08 39.2 4.0 34 15-49 3-37 (115)
466 1iak_A MHC class II I-AK; hist 97.3 0.00061 2.1E-08 42.7 5.5 43 9-54 89-133 (199)
467 1dee_B IGM RF 2A2; FAB-IBP com 97.3 0.00028 9.7E-09 43.1 3.9 35 14-49 4-40 (223)
468 3bae_H WO2 IGG2A FAB fragment 97.3 0.00018 6.2E-09 44.0 2.9 34 15-49 5-42 (228)
469 1c5d_H Monoclonal antibody aga 97.3 0.00026 8.7E-09 43.0 3.6 33 16-49 6-40 (215)
470 3tv3_L PGT128 light chain, IG 97.3 0.00025 8.4E-09 42.3 3.5 30 16-48 6-35 (211)
471 1ypz_F T-cell receptor gamma c 97.3 0.00041 1.4E-08 42.8 4.5 35 13-48 4-40 (230)
472 2i24_N NEW antigen receptor PB 97.2 0.00033 1.1E-08 40.4 3.8 36 13-49 3-40 (121)
473 1x9q_A SCFV, 4M5.3 anti-fluore 97.2 0.00044 1.5E-08 43.2 4.7 35 13-48 154-190 (268)
474 3v2a_R Vascular endothelial gr 97.2 0.00063 2.2E-08 47.4 5.9 42 10-52 223-266 (772)
475 1zvo_C Myeloma immunoglobulin 97.2 0.00059 2E-08 46.9 5.6 41 10-55 403-446 (512)
476 3qib_D 2B4 beta chain; IG doma 97.2 0.00032 1.1E-08 43.7 3.9 35 11-47 28-62 (270)
477 1eaj_A Coxsackie virus and ade 97.2 0.00026 8.9E-09 38.7 3.0 34 16-49 10-47 (126)
478 3u6r_L Antibody 1:7 (light cha 97.2 0.00058 2E-08 40.7 4.6 35 13-48 3-37 (143)
479 2otu_A FV light chain variable 97.2 0.00075 2.6E-08 37.8 4.9 34 13-48 5-39 (115)
480 1nko_A Sialic acid binding IG- 97.2 0.00038 1.3E-08 39.7 3.6 37 12-49 8-51 (132)
481 1oaq_L Light chain; antibody, 97.2 0.00029 1E-08 39.8 3.1 31 17-48 7-40 (120)
482 2dru_A Chimera of CD48 antigen 97.2 0.00027 9.3E-09 42.5 3.1 33 18-50 6-39 (180)
483 2qhl_A Novel immune-type recep 97.2 0.00015 5E-09 40.6 1.7 31 18-48 6-37 (111)
484 1ncn_A T lymphocyte activation 97.2 0.00059 2E-08 37.6 4.1 30 21-50 4-38 (110)
485 1p6f_A NKP46, natural cytotoxi 97.2 0.00059 2E-08 43.0 4.5 40 10-53 102-141 (242)
486 1bec_A 14.3.D T cell antigen r 97.2 0.00064 2.2E-08 41.8 4.6 35 13-49 2-36 (238)
487 3fku_X Neutralizing antibody F 97.1 0.0005 1.7E-08 43.6 4.2 35 12-48 3-39 (280)
488 1ccz_A Protein (CD58); LFA-3, 97.1 0.00026 8.8E-09 42.3 2.7 29 21-50 5-33 (171)
489 1ypz_E T cell receptor delta, 97.1 0.00087 3E-08 40.9 5.0 35 13-49 4-38 (207)
490 1hng_A CD2; T lymphocyte adhes 97.1 0.00022 7.6E-09 42.5 2.3 32 21-53 6-39 (176)
491 3mjg_X Beta-type platelet-deri 97.1 0.00031 1.1E-08 43.5 2.9 30 19-53 8-37 (289)
492 1dn0_B IGM-kappa cold agglutin 97.1 0.00062 2.1E-08 42.0 4.2 35 14-49 4-40 (232)
493 1dr9_A B7-1 (CD80), T lymphocy 97.1 0.00018 6.1E-09 42.7 1.7 32 21-53 4-39 (201)
494 2xzc_L FAB A.17 light chain; i 97.1 0.00044 1.5E-08 41.5 3.3 32 18-49 7-40 (216)
495 2j6e_L IGM, FAB light chain; a 97.1 0.00018 6.2E-09 43.5 1.5 37 11-49 21-59 (234)
496 3bj9_1 Immunoglobulin IOTA cha 97.1 0.00081 2.8E-08 37.5 4.1 33 15-48 3-38 (116)
497 1iga_A IGA1; immunoglobulin; N 97.1 0.00059 2E-08 45.9 4.0 37 9-45 245-284 (475)
498 2hp4_A T-cell surface glycopro 97.0 0.00095 3.2E-08 37.7 4.3 35 13-48 3-38 (114)
499 4i0k_A CD276 antigen; immunogl 97.0 0.00034 1.2E-08 41.8 2.5 30 21-50 5-39 (222)
500 3r0n_A Poliovirus receptor-rel 97.0 0.00079 2.7E-08 37.9 3.9 34 14-48 6-43 (128)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.38 E-value=9.6e-13 Score=75.50 Aligned_cols=51 Identities=22% Similarity=0.560 Sum_probs=41.0
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCC
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 57 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~ 57 (61)
.....+|.|+..|. ++.+.+|+.+.|.|.+.|+|.|+|+|++ ||..|....
T Consensus 8 ~~~~~pP~f~~~p~-~~~v~~G~~~~l~C~~~G~P~p~v~W~k-~g~~l~~~~ 58 (107)
T 3knb_B 8 GDQGSPPCFLRFPR-PVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASE 58 (107)
T ss_dssp --CCEEEEEEECCC-CEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred CCCCCCCEEEeCCC-cEEEeCCCcEEEEEEEEEecCCEEEEEE-Cccccccee
Confidence 34556899999865 4567789899999999999999999998 888876543
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.26 E-value=5.8e-12 Score=71.19 Aligned_cols=47 Identities=23% Similarity=0.494 Sum_probs=39.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 57 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~ 57 (61)
.+|.|+.. +.++.+.+|+.++|.|.+.|+|.|+|+|++ ||..|....
T Consensus 4 ~PP~i~~~-p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k-~g~~i~~~~ 50 (100)
T 3knb_A 4 IPPKIEAL-PSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQE 50 (100)
T ss_dssp EEEEECCC-CSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTG
T ss_pred CCCEEEeC-CCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CceEeeeec
Confidence 47899876 456677889999999999999999999998 888775443
No 3
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.22 E-value=1.8e-11 Score=79.36 Aligned_cols=51 Identities=78% Similarity=1.400 Sum_probs=45.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCCCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGL 59 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~~~ 59 (61)
.+|.|+.+|++.+.+.+|..++|.|.|.|+|.|+|+|++.||.++...++.
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~ 52 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGL 52 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTT
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCc
Confidence 589999999888888889899999999999999999999889888765544
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.17 E-value=3.1e-11 Score=85.53 Aligned_cols=54 Identities=78% Similarity=1.381 Sum_probs=46.9
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCCCCC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGLR 60 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~~~~ 60 (61)
...+|.|+.+|.+.+.+.+|..++|.|.|.|.|.|+|+|+++||..+.+.++++
T Consensus 35 ~~~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~ 88 (816)
T 3dmk_A 35 DQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLR 88 (816)
T ss_dssp -CEEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTB
T ss_pred ccCCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceE
Confidence 355799999998888899999999999999999999999998999887666543
No 5
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1e-10 Score=63.99 Aligned_cols=46 Identities=17% Similarity=0.411 Sum_probs=38.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..|.+ +.+..|..+.|.|.+.|.|.|.|+|++ ||..+..
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~ 48 (99)
T 1g1c_A 3 MEAPKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYK-NGVKIER 48 (99)
T ss_dssp CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCCceEecCcc-eEEcCCCcEEEEEEEEEeCCCEEEEEE-CCEECCC
Confidence 468999998655 456788889999999999999999998 7777654
No 6
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.11 E-value=2.1e-10 Score=63.25 Aligned_cols=47 Identities=11% Similarity=0.239 Sum_probs=38.6
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+..|. .+.+..|..+.|.|.+.|+|.|.|+|++ ||..+...
T Consensus 6 ~~~P~~~~~~~-~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~ 52 (103)
T 3qp3_A 6 DHAPRITLRMR-SHRVPCGQNTRFILNVQSKPTAEVKWYH-NGVELQES 52 (103)
T ss_dssp CEEEEEEECCC-CEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCC
T ss_pred CCCCEEEeCCc-ceEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCC
Confidence 35789998864 4566788899999999999999999998 77776543
No 7
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.11 E-value=1.8e-10 Score=65.15 Aligned_cols=48 Identities=27% Similarity=0.625 Sum_probs=39.8
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.....+|.|+..|. .+.+..|..++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 4 ~~~~~pP~i~~~p~-~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~ 51 (117)
T 2v9t_A 4 RQEDFPPRIVEHPS-DLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVE 51 (117)
T ss_dssp CCCCEEEEEEECCC-CEEECTTCCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred ccccCCCeeEcCCC-CEEEcCCCcEEEEEECCccCCCeEEEEE-CCEecc
Confidence 45567899999865 4557788899999999999999999998 676664
No 8
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.10 E-value=1.7e-10 Score=65.08 Aligned_cols=47 Identities=13% Similarity=0.278 Sum_probs=38.4
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.|+..| ..+.+..|..++|.|.+.|+|.|+|+|++ ||..+..
T Consensus 4 ~~~pp~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~ 50 (114)
T 2cqv_A 4 GSSGPQIIQFP-EDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQE 50 (114)
T ss_dssp CCCCCEESCCC-CSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCC
T ss_pred CCCCCEEEeCC-CCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcC
Confidence 44688998764 55667889899999999999999999998 6666643
No 9
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.10 E-value=8.5e-11 Score=64.60 Aligned_cols=47 Identities=17% Similarity=0.482 Sum_probs=39.0
Q ss_pred CCcceEEEcC---CCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEP---PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~P---p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..| +..+.+..|..+.|.|.+.|.|.|.|+|++ ||..+..
T Consensus 2 ~~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~~~~ 51 (100)
T 3caf_A 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQ 51 (100)
T ss_dssp CEEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEE-TTEECCG
T ss_pred CCCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEE-CCEEccc
Confidence 4589999776 356677889999999999999999999998 7776643
No 10
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.09 E-value=1.1e-10 Score=76.91 Aligned_cols=47 Identities=32% Similarity=0.685 Sum_probs=39.2
Q ss_pred CCcceEEEcCCCcEEe--cCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDF--SNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~--~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|+|+++|.+.+.. .+|..+.|.|.|.|+|.|+|+|++ ||.+|..
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k-~g~~l~~ 51 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKL-NGTDVDI 51 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEE-CCEECcC
Confidence 5689999997776532 467779999999999999999998 8888754
No 11
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.09 E-value=2.3e-10 Score=62.51 Aligned_cols=43 Identities=19% Similarity=0.419 Sum_probs=35.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCC--eeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG--TAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg--~~i~ 54 (61)
+|.|... +..+.+..|..+.|.|.|.|+|.|.|+|++ || ..+.
T Consensus 2 ~P~i~~~-~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~~~~~~~~ 46 (93)
T 1wit_A 2 KPKILTA-SRKIKIKAGFTHNLEVDFIGAPDPTATWTV-GDSGAALA 46 (93)
T ss_dssp CCEECCC-CCEEEECTTBCCEEEEEEECCSSCEEEEEC-STTTCBCS
T ss_pred CCeEEcC-CCceEEeCCCEEEEEEEEEEcCCCEEEEEE-CCCCcccC
Confidence 6888655 567778899999999999999999999998 55 6553
No 12
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=62.95 Aligned_cols=47 Identities=21% Similarity=0.471 Sum_probs=38.5
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+..| ..+.+..|..++|.|.+.|+|.|.|+|++ ||..+...
T Consensus 3 ~~~P~~~~~p-~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~ 49 (100)
T 2kdg_A 3 MGPPRFIQVP-ENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSD 49 (100)
T ss_dssp CEEEECCCCC-CCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCC
T ss_pred CCCCeEEeCC-CCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCC
Confidence 4578888875 45566788899999999999999999998 77777543
No 13
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.07 E-value=4.1e-10 Score=61.58 Aligned_cols=45 Identities=18% Similarity=0.384 Sum_probs=37.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+|.|+..|.. +.+..|..++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~ 47 (99)
T 1u2h_A 3 KAPPTFKVSLMD-QSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVR 47 (99)
T ss_dssp CEEEEEEECCCC-EEEETTCCEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred CCCCEEEEcCCc-eEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 357899988655 456788899999999999999999998 776664
No 14
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=5.9e-10 Score=61.30 Aligned_cols=47 Identities=28% Similarity=0.595 Sum_probs=38.3
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|+..|.. +.+..|..++|.|.|.|+|.|.|+|++ ||..+.
T Consensus 4 ~~~~~P~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 50 (100)
T 2edj_A 4 GSSGPPIILQGPAN-QTLAVDGTALLKCKATGDPLPVISWLK-EGFTFP 50 (100)
T ss_dssp SCCSSCEEEECCCC-EEEESSSEEEECCEEECSSCCEEEEEE-SSSEES
T ss_pred CCCCCCEEEeCcCC-EEEcCCCcEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 34568899988655 456778889999999999999999998 666664
No 15
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.04 E-value=6.4e-10 Score=60.63 Aligned_cols=46 Identities=26% Similarity=0.563 Sum_probs=38.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..|.+ +.+..|..+.|.|.+.|.|.|.|+|++ ||..+..
T Consensus 4 ~~~P~i~~~~~~-~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~ 49 (99)
T 3puc_A 4 SSKPVIVTGLQD-TTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQ 49 (99)
T ss_dssp CEEEEEEECCCC-EEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCS
T ss_pred CCCCEEEecCcc-EEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcC
Confidence 457899988654 456788889999999999999999998 7777644
No 16
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.03 E-value=4.2e-10 Score=61.80 Aligned_cols=47 Identities=21% Similarity=0.501 Sum_probs=38.7
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|+..|. .+.+..|+.+.|.|.+.|.|.|.|+|++ ||..+.
T Consensus 7 ~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~ 53 (99)
T 2yr3_A 7 GMEVAPSFSSVLK-DCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQ 53 (99)
T ss_dssp CCCEEEEEEECCC-CEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCS
T ss_pred CcccCCceeecCC-CCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECc
Confidence 4456889998865 4567889899999999999999999998 666654
No 17
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.03 E-value=7.6e-10 Score=61.22 Aligned_cols=48 Identities=23% Similarity=0.610 Sum_probs=38.9
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|+..|. .+.+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 9 ~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~ 56 (107)
T 3irg_B 9 DQGSPPCFLRFPR-PVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAA 56 (107)
T ss_dssp -CCEEEEEEECCC-CEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCCCCeeEcCCc-cEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCC
Confidence 3456889998865 4566788899999999999999999998 7777654
No 18
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=3.4e-10 Score=63.08 Aligned_cols=48 Identities=23% Similarity=0.619 Sum_probs=39.4
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.....+|.|+..| ..+.+..|..++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 4 ~~~~~~P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~ 51 (110)
T 2dm3_A 4 GSSGFRPHFLQAP-GDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVR 51 (110)
T ss_dssp SCCCCCCEEEECC-CEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCC
T ss_pred CCCCCCCcEEeCC-CcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 4456789999985 55567788899999999999999999998 666654
No 19
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=4.8e-10 Score=62.73 Aligned_cols=48 Identities=21% Similarity=0.522 Sum_probs=38.7
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|+..|. .+.+..|..+.|.|.|.|+|.|.|+|++ ||..+..
T Consensus 4 ~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~ 51 (110)
T 2dm2_A 4 GSSGAPFFEMKLK-HYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQISP 51 (110)
T ss_dssp CCSCCCCBSSCCC-CEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCCT
T ss_pred CCCCCCEEEecCc-CeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCC
Confidence 3456888988864 4556788889999999999999999998 7766643
No 20
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=7.5e-10 Score=62.86 Aligned_cols=48 Identities=13% Similarity=0.255 Sum_probs=38.8
Q ss_pred CCCCcceEEEc--CCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKE--PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~--Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|... ++..+.+..|..+.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 17 ~v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~g~~l~ 66 (118)
T 2e7c_A 17 EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTK-GGAPLD 66 (118)
T ss_dssp CCSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred eeccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEE-CCEECC
Confidence 34557888653 4566777889999999999999999999998 777764
No 21
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.00 E-value=2.2e-09 Score=58.47 Aligned_cols=45 Identities=20% Similarity=0.384 Sum_probs=36.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.++.|...|.. ..+..|..+.|.|.|.|+|.|.|+|++ ||..+..
T Consensus 2 ~~~~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~ 46 (91)
T 3bfo_A 2 SKLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTH 46 (91)
T ss_dssp CCCEEEECCCC-EEECTTSCEEEECEEECSSCCEEEEEE-TTEECTT
T ss_pred CceEEEECCCc-cEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCc
Confidence 35778888655 456788899999999999999999998 7776643
No 22
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=9.7e-10 Score=62.40 Aligned_cols=45 Identities=16% Similarity=0.295 Sum_probs=36.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.++.|+..| .++.+.+|..++|.|.+.|.|.|.|+|++ ||..+..
T Consensus 12 ~p~~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~ 56 (115)
T 2cr6_A 12 RRVHIIEDL-EDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHA 56 (115)
T ss_dssp SCCEEEECC-CEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECC
T ss_pred CCCeEeccC-ccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCC
Confidence 345777775 56677889999999999999999999998 7777654
No 23
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.97 E-value=7e-10 Score=60.28 Aligned_cols=45 Identities=24% Similarity=0.519 Sum_probs=37.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+|.|+..| ..+.+..|..+.|.|.+.|.|.|.|+|++ ||..+.
T Consensus 3 ~~pP~i~~~~-~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 47 (100)
T 3irg_A 3 GIPPKIEALP-SDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIH 47 (100)
T ss_dssp CEEEEECCCC-SEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred CCCCeeecCC-CcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEee
Confidence 3578888774 55667788899999999999999999998 777764
No 24
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.96 E-value=5.2e-10 Score=62.74 Aligned_cols=48 Identities=17% Similarity=0.362 Sum_probs=37.0
Q ss_pred CcceEEEcCCCcEE--ecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCCC
Q psy11557 9 LGPIFIKEPPNRID--FSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 58 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~--~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~~ 58 (61)
+-|.++..|++++. ..+|+.++|.|.+.| |.|.|+|++ ||.+|.....
T Consensus 2 ~~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k-~g~~i~~~~~ 51 (91)
T 2lvc_A 2 HMPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYK-DGQEVEESDF 51 (91)
T ss_dssp CCCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEE-TTSCCCCCSS
T ss_pred CCCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEE-CCEEeeeeee
Confidence 34667777777643 357888999999987 999999998 8888765443
No 25
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=6.1e-10 Score=63.11 Aligned_cols=47 Identities=30% Similarity=0.564 Sum_probs=38.5
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|+..|.+ +.+..|..++|.|.|.|+|.|.|+|++ ||..+.
T Consensus 4 ~~~~pP~i~~~p~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k-~g~~~~ 50 (118)
T 2eo9_A 4 GSSGPPVIRQGPVN-QTVAVDGTFVLSCVATGSPVPTILWRK-DGVLVS 50 (118)
T ss_dssp SCCCSCCCSBCCCC-EEEETTCEEEEECBCCCSSCCEEEEEE-SSSBCC
T ss_pred CCCCCCEEEcCCCC-EEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECc
Confidence 45678999888555 556778889999999999999999998 776664
No 26
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.96 E-value=6.9e-10 Score=63.48 Aligned_cols=46 Identities=24% Similarity=0.583 Sum_probs=38.1
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
...+|.|++.|.+ +.+..|..++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 12 ~~~~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~ 57 (116)
T 2kkq_A 12 HKRAPMFIYKPQS-KKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQ 57 (116)
T ss_dssp CCBCCCBSSCCCC-EEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECC
T ss_pred CCCCCeEEeCCCc-EEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECc
Confidence 3457899998665 456788889999999999999999998 776664
No 27
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.96 E-value=2.1e-09 Score=63.80 Aligned_cols=47 Identities=26% Similarity=0.696 Sum_probs=38.7
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.|+..|.. +.+..|..++|.|.|.|+|.|.|+|++ ||..+..
T Consensus 38 v~~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~ 84 (154)
T 1fhg_A 38 PHVKPYFTKTILD-MEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKE 84 (154)
T ss_dssp CCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCCCeEEccCCc-EEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCC
Confidence 3458899988655 567788899999999999999999998 7776654
No 28
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.95 E-value=1.1e-09 Score=63.59 Aligned_cols=43 Identities=28% Similarity=0.467 Sum_probs=34.3
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
...+|.|++.|.+ +.+..|..++|.|.+.|+|.|.|+|++ +|.
T Consensus 18 ~~~pP~~~~~p~~-~~v~~G~~v~L~C~~~g~P~p~i~W~k-~~~ 60 (137)
T 3qr2_A 18 GSHMAGFVQAPLS-QQRWVGGSVELHCEAVGSPVPEIQWWF-EGQ 60 (137)
T ss_dssp ---CCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEE-EES
T ss_pred CCCCCeEEcCCCC-EEEeCCCCEEEEEEEeeecCCeEEEEE-CCC
Confidence 4568999999655 456788899999999999999999999 444
No 29
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.93 E-value=2.5e-09 Score=59.09 Aligned_cols=46 Identities=15% Similarity=0.303 Sum_probs=38.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..+.+.+.+..|..++|.|.+. .|.|.|+|++ ||..+..
T Consensus 5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k-~g~~i~~ 50 (100)
T 2yuv_A 5 SSGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYK-NGQEIRP 50 (100)
T ss_dssp SSSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEE-SSCBCCC
T ss_pred CCCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEE-CCEECCC
Confidence 46899999987766777888899999999 7999999998 7776643
No 30
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.92 E-value=3.3e-09 Score=58.09 Aligned_cols=42 Identities=5% Similarity=0.093 Sum_probs=35.0
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCCeeecC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg~~i~~ 55 (61)
++..++.++.+.+|..++|.|.+.|. |.|.|+|++ +|..+..
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~-~~~~~~~ 45 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYF-GVRQLEN 45 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEE-TTEECCS
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEE-CCEECcC
Confidence 45566777888899999999999997 999999998 7766643
No 31
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.92 E-value=2.8e-09 Score=59.51 Aligned_cols=46 Identities=13% Similarity=0.049 Sum_probs=36.9
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|++.|.+ +.+.+|..++|.|.+.| |.|.|+|++ ||.+|...
T Consensus 3 ~~~~~~~~~~~~-~~v~~G~~v~l~C~v~~-~~~~v~W~k-~g~~i~~~ 48 (93)
T 1waa_A 3 MALIEVEKPLYG-VEVFVGETAHFEIELSE-PDVHGQWKL-KGQPLAAS 48 (93)
T ss_dssp CCCCCEEECCCC-EEEETTSCEEEEEEESS-SSCCCEEEE-TTEECCCB
T ss_pred CCCcEeeccCcc-eEEeCCCCEEEEEEECC-CCCeEEEEE-CCEECcCC
Confidence 457888888554 56778889999999998 558999998 88887653
No 32
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.90 E-value=9.3e-10 Score=62.08 Aligned_cols=47 Identities=23% Similarity=0.615 Sum_probs=38.1
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....|.|+..|. .+.+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 11 ~~~~~~i~~~p~-~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~g~~l~~ 57 (106)
T 1nct_A 11 TTLAARILTKPR-SMTVYEGESARFSCDTDGEPVPTVTWLR-KGQVLST 57 (106)
T ss_dssp SSCCCEEEECCC-CEEESSSSCEECCEEEECSSCCBCCBCS-SSSCCTT
T ss_pred CCCCCEEEECCC-CEEEeCCCcEEEEEEEEEcCCCEEEEEE-CCEECCC
Confidence 445788988865 4567889899999999999999999998 6766543
No 33
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.90 E-value=6.9e-09 Score=62.83 Aligned_cols=47 Identities=32% Similarity=0.620 Sum_probs=38.0
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|+..|.+ +.+..|+.++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 2 ~g~~pP~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~ 48 (212)
T 2yd1_A 2 TGAHPPEIIRKPQN-QGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVS 48 (212)
T ss_dssp ---CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred CCCCCCEEEcCCCc-eEEecCCEEEEEEEEccCCCCeEEEEE-CCEECC
Confidence 35678999999655 456788899999999999999999998 777764
No 34
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.89 E-value=1.7e-09 Score=61.28 Aligned_cols=47 Identities=13% Similarity=0.300 Sum_probs=40.0
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.|+..+++.+.+..|..++|.|.+ +.|.|.|+|++ ||..|..
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k-~g~~l~~ 58 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLK-NGQEIQM 58 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEE-SSSEECC
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEE-CCEECCC
Confidence 34678999998886778889999999999 89999999998 7777754
No 35
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.89 E-value=4.1e-09 Score=64.00 Aligned_cols=47 Identities=28% Similarity=0.539 Sum_probs=38.1
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|+..|.+ +.+.+|+.+.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 2 ~~~~~P~~~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~~~ 48 (212)
T 2yd6_A 2 TGETPPRFTRTPVD-QTGVSGGVASFICQATGDPRPKIVWNK-KGKKVS 48 (212)
T ss_dssp --CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred CCCCCCeEEeCcce-eEEecCCeEEEEEEEeeCCCCEEEEEE-CCcCCC
Confidence 35678999999665 456788899999999999999999998 676654
No 36
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.88 E-value=1.3e-09 Score=59.86 Aligned_cols=47 Identities=19% Similarity=0.247 Sum_probs=37.6
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|...| ..+.+..|..+.|.|.+.|.| |.|+|++ ||..+..
T Consensus 5 ~~~~pp~~~~~~-~~~~v~~G~~v~l~C~~~g~p-p~i~W~k-~g~~~~~ 51 (95)
T 2ckn_A 5 EQAQPWGVPVEV-ESLLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLVE 51 (95)
T ss_dssp TSSCSCCBTTBB-CCEEECTTSCEEEECCEESSC-CEEEEEB-TTBCCCC
T ss_pred CCCCCCEEEcCc-ceEEEcCCCeEEEEEECCCCC-CceEEEE-CCEecCC
Confidence 345677887774 455678898999999999998 8999998 8877653
No 37
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=3.1e-09 Score=58.83 Aligned_cols=49 Identities=4% Similarity=0.167 Sum_probs=38.5
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 57 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~ 57 (61)
....+|.|++.|. ++.+..|..++|.|.+.|.| |.|+|++ ||..+....
T Consensus 4 v~~~p~~~~~~~~-~~~v~~G~~v~l~C~~~~~~-~~v~W~k-~g~~i~~~~ 52 (101)
T 2edk_A 4 GSSGPVLIVTPLE-DQQVFVGDRVEMAVEVSEEG-AQVMWMK-NGVELTRED 52 (101)
T ss_dssp SCCCCCCEEECCC-CEEEESSCCCBCCEEESCSS-CCCEEEE-SSCBCCCSC
T ss_pred cccCCCEEEecCC-ceEEcCCCCEEEEEEEeCCC-CEEEEEE-CCEECCCCC
Confidence 3445678888754 46677888999999999999 9999998 777765443
No 38
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-09 Score=60.19 Aligned_cols=47 Identities=23% Similarity=0.613 Sum_probs=38.5
Q ss_pred CCCcceEEEcCCCc--EEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNR--IDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~--~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.|+..|... +.+..|+.++|.|.+.|.|.| |+|++ ||..+..
T Consensus 4 ~~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~g~~~~~ 52 (104)
T 2e6p_A 4 GSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYK-DGQKVEE 52 (104)
T ss_dssp CCSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEE-TTEECCC
T ss_pred CCCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEee-CCEECCC
Confidence 35688898887664 566788899999999999999 99998 7777653
No 39
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.88 E-value=2.9e-09 Score=59.79 Aligned_cols=40 Identities=13% Similarity=0.325 Sum_probs=32.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCC---CeEEEEeCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIWIRSD 49 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~---P~I~W~~~d 49 (61)
-.|.|+..|.+ +.+..|+.++|.|.+.|.|. |.|+|++++
T Consensus 3 p~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~ 45 (108)
T 3cx2_A 3 PIGLFVMRPQD-GEVTVGGSITFSARVAGASLLKPPVVKWFKGK 45 (108)
T ss_dssp CCCSCSBCCCC-EEEETTCCEEEEEEEECC-CCSCCEEEEEETT
T ss_pred CccEEEeCCCc-EEEeCCCCEEEEEEECCCccCCCcEEEEccCC
Confidence 35889998654 55678889999999999999 999999843
No 40
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.87 E-value=1e-09 Score=60.73 Aligned_cols=45 Identities=29% Similarity=0.575 Sum_probs=30.7
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+|.|+..|.. +.+..|..+.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 8 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~ 52 (108)
T 3kvq_A 8 RVAPTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFK-DNETLV 52 (108)
T ss_dssp ---CCCBSCCCC-EEEETTCCEEEECBCC----CCEEEEE-SSSBCC
T ss_pred cCCCceecCCCC-eEEeCCCeEEEEEECcCcCCCeEEEEE-CCeEcc
Confidence 457888887544 556778899999999999999999998 665554
No 41
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.85 E-value=1e-08 Score=60.83 Aligned_cols=45 Identities=27% Similarity=0.622 Sum_probs=37.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+|.|+..|.+ +.+..|+.+.|.|.+.|.|.|.|+|++ ||..+.
T Consensus 2 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 46 (197)
T 2j8h_A 2 AMAPHFKEELRN-LNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEII 46 (197)
T ss_dssp -CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred CCCCEEEEcCCc-cEEcCCCEEEEEEEEeecCCCEEEEEE-CCEECc
Confidence 468999998654 567788899999999999999999998 776654
No 42
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.85 E-value=4.5e-09 Score=58.59 Aligned_cols=47 Identities=11% Similarity=0.229 Sum_probs=37.9
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|++.|.+ +.+..|..+.|.|.+.|.|.| |+|++ ||..+..
T Consensus 4 ~~~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~-v~W~k-~g~~~~~ 50 (106)
T 2dlt_A 4 GSSGQLEVLQDIAD-LTVKAAEQAVFKCEVSDEKVT-GKWYK-NGVEVRP 50 (106)
T ss_dssp SSCCCCCEEECCCC-EEEESSCCEECCCEESCSSCE-EEEEE-SSCBCCC
T ss_pred CCCCCCEEecCCCC-eEEeCCCeEEEEEEEcCCCcc-eEEEc-CCEECcC
Confidence 34567899988655 556788899999999999998 99998 7776654
No 43
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.85 E-value=6.9e-09 Score=61.33 Aligned_cols=47 Identities=28% Similarity=0.528 Sum_probs=38.7
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.|+..|.. +.+.+|+.++|.|.+.|.|.|.|+|++ ||..+..
T Consensus 2 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 48 (194)
T 2a38_A 2 TTQAPTFTQPLQS-VVVLEGSTATFEAHISGFPVPEVSWFR-DGQVIST 48 (194)
T ss_dssp CCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-SSSBCCT
T ss_pred CCCCCeEEccCCc-eEEECCCEEEEEEEEEecCCCEEEEEE-CCEEccc
Confidence 4568999998655 556788899999999999999999998 7766643
No 44
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.84 E-value=1.2e-08 Score=61.50 Aligned_cols=49 Identities=27% Similarity=0.638 Sum_probs=39.8
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.....+|.|+..|.. +.+.+|+.++|.|.+.|+|.|.|+|++ ||..+..
T Consensus 4 ~~~~~~P~i~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~ 52 (217)
T 2vr9_A 4 AGQYQSPRIIEHPTD-LVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVST 52 (217)
T ss_dssp --CCCCCEEEECCCC-EEECTTSCEEECCEEECSSCCEEEEEE-TTEECCC
T ss_pred ccccCCCEEecCCCc-eEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccC
Confidence 445678999998654 567889899999999999999999998 7777644
No 45
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.84 E-value=4.1e-09 Score=68.30 Aligned_cols=48 Identities=25% Similarity=0.488 Sum_probs=39.2
Q ss_pred CCcceEEEcCCCcEE--ecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRID--FSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~--~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+.+|.+.+. ..+|+.++|.|.+.|+|.|+|+|++ ||..+...
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k-~g~~~~~~ 51 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKM-NGTELKMG 51 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEE-TTEECCCS
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEE-CCEECCcC
Confidence 468999999766543 1577789999999999999999998 78777543
No 46
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.83 E-value=1.4e-08 Score=63.86 Aligned_cols=45 Identities=24% Similarity=0.596 Sum_probs=38.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+|.|+..|. ++.+..|+.++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 2 ~~~P~~~~~p~-~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~ 46 (305)
T 2nzi_A 2 AMAPHFKEELR-NLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEII 46 (305)
T ss_dssp CCCCEEEECCC-CEEECTTCCEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred CCCCeeeeccc-ceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCEEcc
Confidence 46899999965 4567889899999999999999999998 666654
No 47
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.82 E-value=1.3e-09 Score=67.95 Aligned_cols=43 Identities=21% Similarity=0.470 Sum_probs=31.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
+|.|... +....+.+|+.++|.|.|.|+|.|+|+|+++||...
T Consensus 106 p~~~~~~-~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~ 148 (203)
T 4fa8_A 106 PLTLSVH-SERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEP 148 (203)
T ss_dssp EEEEEEE-EEECCSSCSCCEEEEEEEEEESCCEEEECCC-----
T ss_pred Cceeeec-ceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeec
Confidence 4566655 444556788889999999999999999998777553
No 48
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.82 E-value=4.5e-09 Score=58.32 Aligned_cols=47 Identities=15% Similarity=0.311 Sum_probs=36.1
Q ss_pred CCcce-EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCC
Q psy11557 8 TLGPI-FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 57 (61)
Q Consensus 8 ~~~P~-f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~ 57 (61)
..+|. |+.. +.++.+..|..++|.|.+.| |.|.|+|++ ||..+....
T Consensus 4 g~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~l~~~~ 51 (103)
T 1x44_A 4 GSSGIMVTKQ-LEDTTAYCGERVELECEVSE-DDANVKWFK-NGEEIIPGP 51 (103)
T ss_dssp CCSSCCCSBC-CCCEEEETTEEEEEEEECSS-SSCCCEEEE-TTEECCCST
T ss_pred CCCCceeecc-CCCEEEECCCCEEEEEEecC-CCCeEEEEE-CCEECCCCC
Confidence 45565 6665 45566778889999999999 889999998 887775443
No 49
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.81 E-value=1.8e-08 Score=60.21 Aligned_cols=45 Identities=18% Similarity=0.541 Sum_probs=37.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.|.+...++....+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 116 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~ 160 (212)
T 2r15_A 116 RARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALAQ 160 (212)
T ss_dssp SCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEE-TTEEECC
T ss_pred CCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEE-CCeECcc
Confidence 56677776777777889899999999999999999998 7777754
No 50
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=2.3e-09 Score=58.85 Aligned_cols=47 Identities=19% Similarity=0.466 Sum_probs=38.3
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|+..|.... +..|..++|.|.+.|.|.|.|+|++ ||..+.
T Consensus 6 ~~~~~~~i~~~p~~~~-v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~ 52 (96)
T 2ens_A 6 SGLEEVQLVVEPEGGA-VAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLP 52 (96)
T ss_dssp CCCCSCCCEEESTTSE-ECTTCEEEEECCCSSCSSCCCCCEE-SSSBCS
T ss_pred CCCCCCEEEECCCCCE-EcCCCeEEEEEEEccCCCCEEEEEE-CCEECc
Confidence 3456788988865654 6778889999999999999999998 777664
No 51
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.80 E-value=4.9e-09 Score=57.91 Aligned_cols=45 Identities=11% Similarity=0.250 Sum_probs=36.1
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
...+|.|+..|. ++.+.+|+.++|.|.+.|.|.| |+|++ ||..+.
T Consensus 5 ~~~pp~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~ 49 (103)
T 2e7b_A 5 SSGPVRFQEALK-DLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLR 49 (103)
T ss_dssp CCCCCCCTBCCC-CEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCC
T ss_pred CCCCCEEEecCc-cEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECC
Confidence 445788877754 4567788899999999999999 99998 666654
No 52
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=7.3e-09 Score=57.20 Aligned_cols=47 Identities=13% Similarity=0.268 Sum_probs=37.1
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|+..|.+ +.+..|..++|.|.+.| |.|.|+|++ ||..+..
T Consensus 4 ~~~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~~~~ 50 (103)
T 2edf_A 4 GSSGPAAIIKPLED-QWVAPGEDVELRCELSR-AGTPVHWLK-DRKAIRK 50 (103)
T ss_dssp SCCCCCCEEECCCC-EEECTTSCEEECCEESS-SSCCCCEEE-SSCBCCC
T ss_pred CCCCCcEEEecCCc-cEEcCCCCEEEEEEEeC-CCCcEEEEE-CCEEccC
Confidence 34457788877554 56778989999999999 999999998 7776643
No 53
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.80 E-value=9.5e-09 Score=65.03 Aligned_cols=46 Identities=33% Similarity=0.552 Sum_probs=33.4
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
....+|.|+..|.+ +.+.+|+.++|.|.+.|+|.|.|+|++ ||..+
T Consensus 2 ~~~~~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~i~W~k-~g~~i 47 (304)
T 2yd9_A 2 TGEEPPRFIKEPKD-QIGVSGGVASFVCQATGDPKPRVTWNK-KGKKV 47 (304)
T ss_dssp --CCCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEC-------
T ss_pred CCccCCeeeecCCc-eEecCCCeEEEEEEEEEeCCCeEEEEE-CCEEC
Confidence 34578999999655 456778899999999999999999998 66655
No 54
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.79 E-value=1.6e-08 Score=62.64 Aligned_cols=44 Identities=16% Similarity=0.455 Sum_probs=36.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..+ + ..+.+|..++|.|.+.|. |.|+|+|++ ||.+|..
T Consensus 116 ~~P~~~~~~-~-~~v~~g~~v~l~C~v~g~~P~p~i~W~k-~g~~l~~ 160 (207)
T 3rbs_A 116 QGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYK-DEREISV 160 (207)
T ss_dssp TSSEEEEEE-E-EEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECC
T ss_pred CCCceEecC-C-cEEcCCCcEEEEEEEeCCCCCCEEEEEE-CCEECCC
Confidence 378998875 3 556788889999999999 999999998 8887754
No 55
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.78 E-value=1.2e-08 Score=60.79 Aligned_cols=45 Identities=24% Similarity=0.478 Sum_probs=37.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEec-ccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~-G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..|.+ +.+..|+.+.|.|.+. |.|.|.|+|++ ||..+..
T Consensus 1 e~~~~~~~p~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~ 46 (195)
T 2c5d_C 1 EESPFVGNPGN-ITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILEL 46 (195)
T ss_dssp -CCSEEECCCC-EEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCS
T ss_pred CCCeeccChhh-eEEecCCcEEEecccccCCCCcEEEEEE-CCEEccc
Confidence 36899998654 5677888999999999 99999999998 7877654
No 56
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.78 E-value=1.8e-08 Score=59.33 Aligned_cols=48 Identities=27% Similarity=0.378 Sum_probs=39.3
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|+..|. .+.+..|+.+.|.|.+.|.|.|.|+|++ +|..+..
T Consensus 3 ~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 50 (197)
T 3lcy_A 3 MSGEAPGIRKEMK-DVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQ 50 (197)
T ss_dssp CCCEEEEEEECCC-CEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECC
T ss_pred ccCCCCcccccCC-ceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCC
Confidence 3457899999865 5567788899999999999999999998 7766643
No 57
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=6.1e-09 Score=58.56 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=36.8
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
...+|.|++.+ .++.+.+|+.++|.|.+ .|.|.|+|++ ||..|...
T Consensus 4 ~~~p~~~~~~~-~~~~v~~G~~v~l~C~v--~p~p~v~W~k-~g~~l~~~ 49 (100)
T 2yuz_A 4 GSSGLKILTPL-TDQTVNLGKEICLKCEI--SENIPGKWTK-NGLPVQES 49 (100)
T ss_dssp SSCCCCCSBCC-CCEEEETTSCCCEEEEC--SSCCCEEEEE-TTEECCCC
T ss_pred CCCCCEEeccC-CceEEcCCCCEEEEEEe--CCCCeEEEEE-CCEECCCC
Confidence 44577888775 45567788899999999 8999999998 88887543
No 58
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.76 E-value=8.8e-09 Score=60.77 Aligned_cols=48 Identities=23% Similarity=0.406 Sum_probs=38.3
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
+....+|.|+.. +..+.+..|+.++|.|.+.|.|.|.|+|++ +|..+.
T Consensus 2 ~~~~~~P~i~~~-~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~ 49 (192)
T 2iep_A 2 EKLPKAPVITTP-LETVDALVEEVATFMCAVESYPQPEISWTR-NKILIK 49 (192)
T ss_dssp --CCEEEEESSC-CCEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECC
T ss_pred CccCCCceeecC-ccceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEcc
Confidence 455678888776 456667788899999999999999999998 777664
No 59
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.76 E-value=1.9e-08 Score=69.51 Aligned_cols=47 Identities=19% Similarity=0.458 Sum_probs=39.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+.. ..++.+..|+.++|.|.+.|+|.|.|+|++ ||..|...
T Consensus 3 ~~pP~f~~~-~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~g~~l~~~ 49 (570)
T 3b43_A 3 MEPPYFIEP-LEHVEAAIGEPITLQCKVDGTPEIRIAWYK-EHTKLRSA 49 (570)
T ss_dssp CCCCEEEEC-CCCEEECTTSCEEEEEEEESSSSCEEEEEC-SSSBCCCC
T ss_pred CCCCcceEE-CCceEEcCCCEEEEEEEEccCCCCEEEEEE-CCEEccCC
Confidence 468999875 566778889999999999999999999998 77766543
No 60
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.76 E-value=3e-08 Score=61.74 Aligned_cols=46 Identities=20% Similarity=0.480 Sum_probs=38.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|...|.+ +.+..|+.++|.|.+.|.|.|.|+|++ ||..+..
T Consensus 3 ~~pP~~~~~p~~-~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~ 48 (284)
T 2rik_A 3 MAPPFFDLKPVS-VDLALGESGTFKCHVTGTAPIKITWAK-DNREIRP 48 (284)
T ss_dssp CCCCEEEECCCC-EEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCS
T ss_pred cCCCEEEccccc-eEecCCCcEEEEEEEEcCCCCEEEEEE-CCEECcC
Confidence 468999998654 556788899999999999999999998 7776643
No 61
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.76 E-value=1.5e-08 Score=64.05 Aligned_cols=48 Identities=13% Similarity=0.361 Sum_probs=39.5
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+..+...+.+..|..++|.|.|.|+|.|.|+|++ ||..+...
T Consensus 206 ~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~i~~~ 253 (315)
T 1itb_B 206 PTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-NGSVIDED 253 (315)
T ss_dssp CCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEE-TTEECCTT
T ss_pred CCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEE-CCEECCcc
Confidence 5678887665545667789899999999999999999998 88877543
No 62
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.76 E-value=2.2e-08 Score=60.87 Aligned_cols=46 Identities=20% Similarity=0.434 Sum_probs=37.2
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.| ..| .++.+..|+.++|.|.|.|+|.|.|+|++ ||..+..
T Consensus 16 ~~~~P~~-~~p-~~~~~~~G~~v~l~C~~~g~p~p~i~W~~-~g~~l~~ 61 (215)
T 3mtr_A 16 HMYAPKL-QGP-VAVYTWEGNQVNITCEVFAYPSATISWFR-DGQLLPS 61 (215)
T ss_dssp CCEEEEE-ECC-SEEEECTTCCEEEEEEEEEESCCEEEEEE-TTEESSC
T ss_pred eecCCcc-cCC-ceEEEECCCCEEEEEEEeecCCCEEEEEE-CCeECCC
Confidence 3457888 554 44677889899999999999999999998 7877654
No 63
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.75 E-value=1.6e-08 Score=60.27 Aligned_cols=48 Identities=27% Similarity=0.625 Sum_probs=38.5
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.....+|.|+..|. .+.+.+|+.+.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 4 ~~~~~pp~i~~~p~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 51 (212)
T 2v9r_A 4 RQEDFPPRIVEHPS-DLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVE 51 (212)
T ss_dssp --CCEEEEEEECCC-CEEECTTCCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred CcccCCcceecCCC-ceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEee
Confidence 34556899999865 4567788899999999999999999998 676654
No 64
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.74 E-value=7.8e-09 Score=57.10 Aligned_cols=37 Identities=16% Similarity=0.381 Sum_probs=31.5
Q ss_pred CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCC
Q psy11557 19 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 57 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~ 57 (61)
.++....|..+.|.|.+.| |.|.|+|++ ||.+|....
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k-~g~~l~~~~ 40 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYK-DGERLASQG 40 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEE-TTEECCCCS
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEE-CCEEccccc
Confidence 4567788999999999988 999999998 888886543
No 65
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.72 E-value=3.4e-08 Score=54.03 Aligned_cols=42 Identities=19% Similarity=0.319 Sum_probs=34.0
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEec-ccCCCeEEEEeCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSD 49 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~-G~P~P~I~W~~~d 49 (61)
..+|.+..+++..+.+..|+.++|.|.+. |.|.|.|+|++++
T Consensus 7 ~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~ 49 (98)
T 1gl4_B 7 SKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLH 49 (98)
T ss_dssp --CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGG
T ss_pred CCCcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCC
Confidence 44566777767777788999999999999 7999999999853
No 66
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.72 E-value=3.1e-08 Score=62.24 Aligned_cols=46 Identities=17% Similarity=0.505 Sum_probs=39.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..|.|+..++..+.+..|..++|.|.+.|+|.|.|+|++ ||..+..
T Consensus 220 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~~~~ 265 (317)
T 2y25_A 220 NRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALAS 265 (317)
T ss_dssp TSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEE-SSSEECC
T ss_pred CCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEE-CCEeCCC
Confidence 467888887887778889999999999999999999998 7766654
No 67
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.72 E-value=7.6e-09 Score=58.91 Aligned_cols=44 Identities=20% Similarity=0.408 Sum_probs=35.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~i~ 54 (61)
..+|.|.. +.. +.+..|..+.|.|.|.|+|.|. |+|++ +|..|.
T Consensus 12 ~~~P~i~~-~~~-~~~~~G~~v~l~C~~~g~P~p~~i~W~~-~~~~l~ 56 (122)
T 2cry_A 12 NGPPIISS-TQT-QHALHGEKGQIKCFIRSTPPPDRIAWSW-KENVLE 56 (122)
T ss_dssp CSSCCEEE-ECC-CCCCTTSCCCCCEEECCSSCCSEEEEES-SSCEEC
T ss_pred ecCCCccC-CCe-EEEecCCCEEEEEEEeecCCCcEeEEEE-CCEEcc
Confidence 45788888 444 4567888999999999999998 99998 666654
No 68
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.70 E-value=9.7e-08 Score=51.99 Aligned_cols=45 Identities=18% Similarity=0.315 Sum_probs=35.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~dg~~i~ 54 (61)
..+|.|+..|... .+..|..++|.|.+.|.| .|.|+|++ +|..+.
T Consensus 8 ~~~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~i~W~k-~~~~~~ 54 (112)
T 3so5_A 8 FPXPQITVQPETQ-SAIXGSDVSFTCSAASSSDSPMTFAWXX-DNEALQ 54 (112)
T ss_dssp CCSCEEEECCCCE-EECTTCCEEEEEEEEESCCCCCEEEEEE-TTEECT
T ss_pred CCCCeEEeCCCCc-EEECCCCEEEEEEEecCCCCCEEEEEcc-CCcccc
Confidence 5688999986555 567788899999999664 68999998 776654
No 69
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.70 E-value=2.5e-08 Score=65.56 Aligned_cols=45 Identities=22% Similarity=0.491 Sum_probs=37.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..+. ++.+..|..+.|.|.|.|+|.|+|+|++ ||.++..
T Consensus 294 ~~P~~~~~~~-~~~v~~g~~v~l~C~~~g~P~p~i~W~k-~g~~l~~ 338 (384)
T 3kld_A 294 AQPNWVQIIN-DIHVAMEESVFWECKANGRPKPTYRWLK-NGDPLLT 338 (384)
T ss_dssp EEEEEEECCC-CEEECTTCCEEEECEEEEESCCEEEEEE-TTEECCC
T ss_pred cCCccccCCC-ceEecCCCCEEEEeECCccCCCeEEEEE-CCEECCC
Confidence 3688888754 4556788889999999999999999998 7877643
No 70
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.69 E-value=4.5e-08 Score=57.39 Aligned_cols=43 Identities=23% Similarity=0.465 Sum_probs=33.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
+|.|+..|... .+.+|+.+.|.|.+.|.|.|.|+|++ +|..+.
T Consensus 2 ~~~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 44 (189)
T 2v5t_A 2 MLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 44 (189)
T ss_dssp CCEEEECCSSE-EEETTSCEEECCEEECSSCCEEEEEC------C
T ss_pred CceeeccCCCE-EEeCCCcEEEEEEEcCCCCCEEEEEE-CCccce
Confidence 68999996665 56778899999999999999999998 555554
No 71
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.69 E-value=1.9e-08 Score=65.15 Aligned_cols=48 Identities=23% Similarity=0.463 Sum_probs=40.1
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+|.|...++..+.+.+|+.++|.|.+.|+|.|+|+|++ ||..+.
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~l~ 59 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR-NSRFFN 59 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEE-TTEECC
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEE-CCEEee
Confidence 345789999877777778889999999999999999999998 776653
No 72
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.68 E-value=2.3e-08 Score=58.77 Aligned_cols=44 Identities=25% Similarity=0.679 Sum_probs=32.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.|+..|. .+.+..|+.++|.|.+.|.|.|.|+|++ ||..+..
T Consensus 2 ~~~~~~~p~-~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~ 45 (182)
T 1rhf_A 2 GLKLMGAPV-KLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQN 45 (182)
T ss_dssp -----CCCE-EEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCS
T ss_pred CCEEEeCCc-ceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCC
Confidence 578888854 4567788899999999999999999998 7776643
No 73
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=9.3e-09 Score=57.94 Aligned_cols=47 Identities=15% Similarity=0.267 Sum_probs=36.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCC-CeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~-P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+..| .++.+.+|+.++|.|.+.|.|. |.|+|++ ||..|...
T Consensus 6 ~~p~~~~~~~-~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k-~g~~i~~~ 53 (104)
T 2eny_A 6 SGHVGITKRL-KTMEVLEGESCSFECVLSHESASDPAMWTV-GGKTVGSS 53 (104)
T ss_dssp CCCCCCSBCC-CCEEEESSCCEEEEEECSSCCCSSCBCCBS-SSSBCSBC
T ss_pred cCCCEEEecC-CCcEEcCCCcEEEEEEEcCCCCCceeEEEE-CCEECCCC
Confidence 3456677765 5556778889999999999985 4899998 88877543
No 74
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.66 E-value=3.3e-08 Score=54.18 Aligned_cols=44 Identities=18% Similarity=0.382 Sum_probs=35.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..|.|++.| .++.+..|..++|.|.+ |.|.|.|+|++ ||..|..
T Consensus 7 ~~~~~~~~~-~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~ 50 (95)
T 2k1m_A 7 PVSAFSKKP-RSVEVAAGSPAVFEAET-ERAGVKVRWQR-GGSDISA 50 (95)
T ss_dssp CCCCCSBCC-CCEEEETTSCEEEEEEC-SSSSCCCEEEC-SSSEECS
T ss_pred CCCeeEeCC-CcEEEeCCCcEEEEEEe-CCCCCeEEEEE-CCEECCC
Confidence 346787775 44567788899999999 89999999998 7777654
No 75
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.65 E-value=3.6e-08 Score=55.28 Aligned_cols=30 Identities=20% Similarity=0.553 Sum_probs=25.7
Q ss_pred CCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 26 TTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 26 g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
+..+.|.|.|.|+|.|+|+|++ ||..|...
T Consensus 16 ~~~~~~~c~v~G~P~P~i~W~k-~g~~l~~~ 45 (103)
T 1wwb_X 16 DHHWCIPFTVKGNPKPALQWFY-NGAILNES 45 (103)
T ss_dssp CCEEEEEEEEECSSCCEEEEEE-TTEEECCC
T ss_pred CcEEEEEEEEEEeCCCEEEEEE-CCEECCCC
Confidence 4558999999999999999998 88877643
No 76
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.65 E-value=9.6e-08 Score=57.84 Aligned_cols=45 Identities=31% Similarity=0.452 Sum_probs=35.3
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..|.|...|.. ..+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 107 ~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~l~~ 151 (212)
T 2yd6_A 107 GFPTIDMGPQL-KVVERTRTATMLCAASGNPDPEITWFK-DFLPVDT 151 (212)
T ss_dssp TCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEE-TTEEC--
T ss_pred CcceeecCCcc-eeEecCCCEEEEEEecCCCCCeEEEEE-CCccccC
Confidence 45788887554 456678889999999999999999998 7776643
No 77
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.65 E-value=1.6e-08 Score=60.65 Aligned_cols=32 Identities=22% Similarity=0.553 Sum_probs=28.8
Q ss_pred CCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
|.++.+..|..++|.|.|.|+|.|.|+|++++
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g 56 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAI 56 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEEC
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECC
Confidence 56777889999999999999999999999955
No 78
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.65 E-value=4.6e-08 Score=57.47 Aligned_cols=45 Identities=24% Similarity=0.513 Sum_probs=36.6
Q ss_pred cceEEEcCCC-cEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPN-RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~-~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.|...+.. .+.+.+|+.++|.|.+.|.|.|.|+|++ ||..+..
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 47 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEE 47 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCC
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCC
Confidence 6888776443 5667789899999999999999999998 7776654
No 79
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.64 E-value=4.2e-08 Score=53.70 Aligned_cols=42 Identities=12% Similarity=0.154 Sum_probs=32.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
..+|.|+..|.+ +.+..|..++|.|.+.|.|.|.|+|++.++
T Consensus 4 ~~~p~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~ 45 (108)
T 3m45_A 4 KGSQGQFPLTQN-VTVVEGGTAILTCRVDQNDNTSLQWSNPAQ 45 (108)
T ss_dssp ----CCCEECCC-EEEETTSCEEEEEEESSCSSCCEEEECTTC
T ss_pred ccCCCccccCCe-eEEEeCCcEEEEeEEcCCCccEEEEEcCCC
Confidence 356788888655 456778899999999999999999998554
No 80
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.64 E-value=4.9e-08 Score=62.07 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=35.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i 53 (61)
.+|.|...+.....+.+|..++|.|.|.|+|.| .|+|++ ||..+
T Consensus 215 ~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~-~~~~l 259 (313)
T 4fqp_A 215 YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWST-TMGPL 259 (313)
T ss_dssp EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEE-CCEEC
Confidence 467887776666667788889999999999999 699998 55544
No 81
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.64 E-value=1.9e-08 Score=60.49 Aligned_cols=49 Identities=16% Similarity=0.492 Sum_probs=38.2
Q ss_pred CCCCcceEEEcCC---CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPP---NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp---~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.|+..|. ..+.+..|+.+.|.|.+.|.|.|.|+|++ ||..+..
T Consensus 11 ~~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~ 62 (231)
T 3ojm_B 11 NNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQ 62 (231)
T ss_dssp --CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCG
T ss_pred CCccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccc
Confidence 3445788987752 55567789999999999999999999998 7776643
No 82
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.64 E-value=3.2e-08 Score=59.35 Aligned_cols=32 Identities=16% Similarity=0.432 Sum_probs=27.1
Q ss_pred CCCeEEEEEecccCCCeEEEEeCCCeeecCCCC
Q psy11557 26 TTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 58 (61)
Q Consensus 26 g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~~ 58 (61)
+..+.|.|.|.|+|+|+|+|++ ||.+|...+.
T Consensus 15 ~~~~~l~c~v~G~P~P~I~W~k-nG~~l~~~~~ 46 (126)
T 1he7_A 15 MHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSF 46 (126)
T ss_dssp CCEEEEEEEECCSSCCEEEEEE-TTEECCCCSS
T ss_pred CccEEEEEEEeeeCCCeEEEEE-CCEECCCCCc
Confidence 4458999999999999999998 8988876543
No 83
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.64 E-value=4.1e-08 Score=63.52 Aligned_cols=45 Identities=18% Similarity=0.555 Sum_probs=38.1
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.+|.|...|...+.+..|..++|.|.|.|+|.|.|+|++ ||..+.
T Consensus 307 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~ 351 (395)
T 1bih_A 307 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH-NAKPLS 351 (395)
T ss_dssp EEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEE-TTEECC
T ss_pred cCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEE-CCEECC
Confidence 468888887664667889899999999999999999998 777764
No 84
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.63 E-value=1.2e-07 Score=56.39 Aligned_cols=45 Identities=27% Similarity=0.707 Sum_probs=36.4
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i~~ 55 (61)
.+|.|...|.. ..+..|..++|.|.+.|.|.| +|+|++ ||..+..
T Consensus 105 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~ 150 (195)
T 2c5d_C 105 GLPYFLEEPED-RTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPLAT 150 (195)
T ss_dssp CSCEEEECCCC-EEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBSSS
T ss_pred cCCeEEcCCCc-EEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEeccC
Confidence 46888887554 556778889999999999999 999998 6766643
No 85
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.63 E-value=1.5e-07 Score=55.23 Aligned_cols=44 Identities=34% Similarity=0.699 Sum_probs=36.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.|...|.. ..+..|..+.|.|.+.|+|.| .|+|++ +|..+.
T Consensus 97 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~ 141 (182)
T 1rhf_A 97 GVPFFTVEPKD-LAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTKIG 141 (182)
T ss_dssp CSCEEEECCCC-EEECTTCCEEEEEEEECSSSCCEEEEEE-TTEECS
T ss_pred cCCeEEecCcc-eEecCCCEEEEEeEecCCCCCCEEEEEc-CCeECC
Confidence 36788887554 557788889999999999999 999998 776653
No 86
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=2.7e-08 Score=54.86 Aligned_cols=45 Identities=13% Similarity=0.289 Sum_probs=35.6
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..| .++.+.+|..++|.|. .|.|.|.|+|++ ||..+..
T Consensus 6 ~~pp~~~~~~-~~~~v~~G~~v~l~C~-~~~p~~~v~W~k-~~~~l~~ 50 (103)
T 2dku_A 6 SGANCFTEEL-TNLQVEEKGTAVFTCK-TEHPAATVTWRK-GLLELRA 50 (103)
T ss_dssp CCCCCCSSCC-CCEEEETTSEEEEEEE-CSSCCSCCEEEE-SSCBCCS
T ss_pred CCCCEeEecC-CcEEEeCCCcEEEEEE-eCCCCCeEEEEe-CCEECCC
Confidence 3577888875 4556778889999999 599999999998 6666643
No 87
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.62 E-value=8.2e-08 Score=56.61 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=36.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+|.|...++ .+.+..|..++|.|.+.|+|.|.|+|++ +|..+.
T Consensus 111 ~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 155 (201)
T 3s97_C 111 PYPADIVVQFK-DVYALMGQNVTLECFALGNPVPDIRWRK-VLEPMP 155 (201)
T ss_dssp CEEEEEEEECC-CEEEETTCCEEEEEEEEEESCCEEEEEE-TTBCCC
T ss_pred CCCCceEecCC-ceEEecCCcEEEEEEccCCCCCceEEEe-CCCcCC
Confidence 35677888866 5556778889999999999999999998 555554
No 88
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.61 E-value=8e-08 Score=60.72 Aligned_cols=46 Identities=22% Similarity=0.479 Sum_probs=37.6
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|...|.. ..+..|..++|.|.|.|+|.|+|+|++ ||..+..
T Consensus 203 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~l~~ 248 (304)
T 2yd9_A 203 NVAPRFSILPMS-HEIMPGGNVNITCVAVGSPMPYVKWMQ-GAEDLTP 248 (304)
T ss_dssp CEEEEEEECCCC-BCCCTTCCEEEEEEEEEESCCEEEEEE-TTEECSC
T ss_pred ccCCcEEecCCc-eEEcCCCeEEEEEEEeeeCCCEEEEEE-CCEECCC
Confidence 357888888655 456778889999999999999999998 7777653
No 89
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.61 E-value=9.9e-08 Score=56.28 Aligned_cols=44 Identities=27% Similarity=0.474 Sum_probs=35.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.+|.|...|. ...+..|..+.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 99 ~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~ 142 (191)
T 1epf_A 99 QKLMFKNAPT-PQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVI 142 (191)
T ss_dssp CCSEEEECCS-SEECCTTSCEEECCEEECSSCCEEEEEE-TTEEGG
T ss_pred cCceEecCCC-cEeecCCCeEEEEEEECCCCCCEEEEEE-CCEEee
Confidence 4577777754 4456788889999999999999999998 776664
No 90
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.60 E-value=1.1e-07 Score=53.62 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=32.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc--cCCCeEEEEeCCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG--SPNPEIIWIRSDG 50 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G--~P~P~I~W~~~dg 50 (61)
-..+...|+..+.+..|+.++|.|.|.| .|.+.|+|+++++
T Consensus 7 i~~v~i~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~ 49 (122)
T 3s35_X 7 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSS 49 (122)
T ss_dssp EEEEEEESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCT
T ss_pred EEEEEEcCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCc
Confidence 3445667788767778989999999999 5567899998544
No 91
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.59 E-value=1.4e-07 Score=56.05 Aligned_cols=45 Identities=20% Similarity=0.401 Sum_probs=35.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC-CCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS-DGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~-dg~~i~ 54 (61)
.+|.|...+.. ..+..|..+.|.|.|.|+|.|.|+|++. ||.++.
T Consensus 91 ~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 91 AAPDITGHKRS-ENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp CCCEEEEECSE-EEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred cCCcccccCCc-ceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 36778777544 4567788899999999999999999986 666653
No 92
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.59 E-value=9.1e-08 Score=56.41 Aligned_cols=45 Identities=18% Similarity=0.448 Sum_probs=36.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|...+. ...+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 102 ~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~ 146 (194)
T 2a38_A 102 APPNFVQRLQ-SMTVRQGSQVRLQVRVTGIPTPVVKFYR-DGAEIQS 146 (194)
T ss_dssp EEEEEEECCC-CEEECTTEEEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCEEEeCCc-cEEEcCCCEEEEEEEEEEecCCeEEEEE-CCEECCC
Confidence 5677887754 4556778889999999999999999998 7777653
No 93
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.59 E-value=1.1e-07 Score=58.34 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=32.0
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
.+..+|++.+.+.+|..++|.|.|.|.|.|.|+|++..
T Consensus 2 ~v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~ 39 (202)
T 1vca_A 2 KIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQI 39 (202)
T ss_dssp EEEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETT
T ss_pred eEEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCC
Confidence 35677777776668889999999999999999999854
No 94
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.59 E-value=1.3e-07 Score=52.89 Aligned_cols=44 Identities=16% Similarity=0.289 Sum_probs=34.5
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..|.+. .+.+|..+.|.|.+.|. |.|+|++ ||..|..
T Consensus 17 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~l~~ 60 (113)
T 2edh_A 17 ALPIKFTEGLRNE-EATEGATAVLRCELSKM--APVEWWK-GHETLRD 60 (113)
T ss_dssp CSCCCEEECCCCC-EECTTSCEEEEEEESSC--CCCEEEE-SSSBCCC
T ss_pred cCCCcccccCCce-EEeCCCeEEEEEEECCC--CcEEEEE-CCEECCC
Confidence 3457898886554 57788899999999986 7899998 7776643
No 95
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.59 E-value=8.2e-08 Score=56.12 Aligned_cols=44 Identities=7% Similarity=0.085 Sum_probs=35.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 57 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~~ 57 (61)
+|.|++.+ .++.+.+|+.++|+|.++| .|.|+|++ ||.+|....
T Consensus 8 ~~~~~~~l-~d~~v~eG~~a~f~C~vs~--~p~v~W~k-nG~~l~~~~ 51 (112)
T 2e6q_A 8 TARLVAGL-EDVQVYDGEDAVFSLDLST--IIQGTWFL-NGEELKSNE 51 (112)
T ss_dssp CCCEEECC-CCEEEETTCEEEEEEEESS--CCCCEEEE-SSCBCCSSC
T ss_pred CcEEecCC-CCeEEcCCCcEEEEEEECC--CCeEEEEE-CCEECccCc
Confidence 46788775 4556778989999999999 78999998 888886543
No 96
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.58 E-value=4.3e-08 Score=59.75 Aligned_cols=48 Identities=23% Similarity=0.585 Sum_probs=36.7
Q ss_pred CCCcceEEEcC---CCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 7 DTLGPIFIKEP---PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 7 ~~~~P~f~~~P---p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
...+|.|+..+ +..+.+.+|+.++|.|.+.|+|.|.|+|++ ||..+..
T Consensus 8 ~~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~ 58 (241)
T 3grw_A 8 DTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRG 58 (241)
T ss_dssp ---CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECCG
T ss_pred cCCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccCC
Confidence 45688887543 445677889999999999999999999998 7776643
No 97
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=2.6e-08 Score=55.07 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=29.0
Q ss_pred CCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
++..+.+..|..++|.|.+.|.| |.|+|++ ||..+.
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k-~g~~~~ 44 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLA 44 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEE-SSSBCC
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEE-CCEECC
Confidence 34555667888999999999988 8999998 666664
No 98
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.58 E-value=1.9e-07 Score=58.07 Aligned_cols=46 Identities=26% Similarity=0.502 Sum_probs=38.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..++....+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 97 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~ 142 (284)
T 2rik_A 97 EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQE 142 (284)
T ss_dssp CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCC
T ss_pred CCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEE-CCEECcC
Confidence 467888877766667788899999999999999999998 7776644
No 99
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.57 E-value=5.5e-08 Score=54.98 Aligned_cols=42 Identities=19% Similarity=0.502 Sum_probs=30.9
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..+...+ .....|.|.|.|+|.|.|+|++ ||..+..
T Consensus 7 ~pP~i~~~~~~~~----~~~~~l~C~~~g~P~p~i~W~k-~g~~l~~ 48 (118)
T 1wwc_A 7 YPPRVVSLEEPEL----RLEHCIEFVVRGNPPPTLHWLH-NGQPLRE 48 (118)
T ss_dssp CCCCCCCCCCCCC----CCEEEEEEEEECSSCCEEEEEE-TTEECCC
T ss_pred cCCceeccCCCee----ccceEEEEEeeeeCCCeEEEEE-CCEECCC
Confidence 4666665533332 2457999999999999999998 7877754
No 100
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.57 E-value=1.7e-07 Score=60.66 Aligned_cols=44 Identities=32% Similarity=0.581 Sum_probs=34.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC-CCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS-DGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~-dg~~i~~ 55 (61)
+|.|+. |++.. +.+|+.+.|.|.|.|+|.|.|+|+++ +|..|..
T Consensus 1 ~P~i~~-~~~~~-~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~ 45 (389)
T 2jll_A 1 QPHIIQ-LKNET-TYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 45 (389)
T ss_dssp CCEEEE-CCCEE-EETTSEEEEEEEEECSSCCEEEEEETTTTEEECC
T ss_pred CCeEEe-cCceE-EeCCCeEEEEEEeecccCCeEEEEeCCCCceecc
Confidence 478887 45554 45688899999999999999999995 2777643
No 101
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.55 E-value=1.7e-07 Score=56.57 Aligned_cols=44 Identities=27% Similarity=0.516 Sum_probs=35.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.|.|...|.. ..+..|..++|.|.+.|+|.|.|+|++ ||..+..
T Consensus 110 ~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~-~~~~~~~ 153 (212)
T 2yd1_A 110 FPVITQGPGT-RVIEVGHTVLMTCKAIGNPTPNIYWIK-NQTKVDM 153 (212)
T ss_dssp CCEEEECCCC-EEEETTCCEEECCEEECSSCCEEEEEE-TTEECCT
T ss_pred CCeeEeCCCc-eEeecCCeEEEEEEeccCCCCeEEEEE-CCeEccc
Confidence 4788887544 456678889999999999999999998 7776643
No 102
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.55 E-value=2.2e-07 Score=56.68 Aligned_cols=46 Identities=15% Similarity=0.259 Sum_probs=35.5
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+.|+..|.+ +.+..|+.+.|.|.+.|+|.|.|+|++ +|..+.
T Consensus 15 ~~~~~~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~ 60 (218)
T 3k0w_A 15 VPRGSKITVNPES-KAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIP 60 (218)
T ss_dssp ----CCEEECCCC-EEEETTSBEEEECEETTTTSSEEEEEE-TTEECT
T ss_pred cCCCCEEEECCCC-eEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECC
Confidence 3457789999655 456778899999999999999999998 676654
No 103
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.55 E-value=6.6e-08 Score=55.44 Aligned_cols=41 Identities=12% Similarity=0.353 Sum_probs=32.9
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
|+..++..+.+.+|..++|.|.+.|.|.|.|+|++.++..+
T Consensus 3 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~ 43 (124)
T 3rbg_A 3 SLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTI 43 (124)
T ss_dssp -CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEE
T ss_pred cccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEE
Confidence 34445666778889999999999999999999998666544
No 104
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=6.2e-08 Score=57.38 Aligned_cols=44 Identities=20% Similarity=0.500 Sum_probs=35.4
Q ss_pred ccCCCCcceEEEcCCCcEEecCCCCeEEEEEeccc---CCCeEEEEeC
Q psy11557 4 AEDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGS---PNPEIIWIRS 48 (61)
Q Consensus 4 ~~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~---P~P~I~W~~~ 48 (61)
.+.....+.|+..| .++.+.+|..++|+|.+.|. |.|.|+|+++
T Consensus 6 ~~~~~~~~~f~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kg 52 (118)
T 2edn_A 6 SGAEEPTGVFLKKP-DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKG 52 (118)
T ss_dssp CCCCCCSSSCSBCC-CCCEEETTSCEECCEEEETTTSSSCCCCEEEET
T ss_pred CCccCCcceEEECC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeC
Confidence 34445567899996 55567889999999999986 8999999983
No 105
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.53 E-value=3.9e-07 Score=55.57 Aligned_cols=45 Identities=20% Similarity=0.384 Sum_probs=36.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.+...|.. ..+..|..++|.|.+.|+|.|.|+|++ ||..+..
T Consensus 117 ~~p~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~v~W~~-~~~~~~~ 161 (218)
T 3k0w_A 117 SKLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTH 161 (218)
T ss_dssp SSCEEEECCCC-EEECTTCCEEEECEEEBSSCCEEEEEE-TTEECTT
T ss_pred CCceEEECCCc-eeecCCCcEEEEEEecccCCCeEEEEE-CCEECCC
Confidence 34788887544 456778889999999999999999998 7776643
No 106
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.53 E-value=2.3e-07 Score=59.95 Aligned_cols=45 Identities=24% Similarity=0.690 Sum_probs=36.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..|.+ ..+..|+.++|.|.|.|+|.|.|+|++ ||..+..
T Consensus 311 ~~p~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~ 355 (404)
T 3p3y_A 311 AAPYWLDEPKN-LILAPGEDGRLVCRANGNPKPTVQWMV-NGEPLQS 355 (404)
T ss_dssp EEEEEEECCCC-EEECTTCCEEEECEEEEESCCEEEEEE-TTEEGGG
T ss_pred CCCeeeccCCc-ceeecCCcEEEEEEccccCCCceEEEE-CCEecCC
Confidence 36778877544 556788899999999999999999998 7877754
No 107
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.52 E-value=1.7e-07 Score=58.76 Aligned_cols=47 Identities=15% Similarity=0.379 Sum_probs=37.8
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCCeeecCC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg~~i~~~ 56 (61)
...+|.|+.. . ++.+.+|+.++|.|.+.|. |.|.|+|++ ||..+...
T Consensus 4 ~~~~P~~~~~-~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~ 51 (317)
T 2y25_A 4 PFTGPHFVEY-L-SWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVD 51 (317)
T ss_dssp SSSCCEEEEE-E-EEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCS
T ss_pred ccCCCcEeee-e-eEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCC
Confidence 3468999854 4 4677889899999999998 889999998 77777543
No 108
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.52 E-value=1.3e-07 Score=55.77 Aligned_cols=43 Identities=23% Similarity=0.458 Sum_probs=31.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
+|.|...+.. ..+..|..+.|.|.+.|+|.|.|+|++ +|..+.
T Consensus 96 ~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 138 (189)
T 2v44_A 96 KLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 138 (189)
T ss_dssp CCEEESCCCS-EEEETTSCEEECCEEECSSCCEEEEEE-EC--CE
T ss_pred CCceeecCCc-EEEeCCCCEEEEEEECcCCCCcEEEEE-CCcEEe
Confidence 4666655444 456678889999999999999999998 555443
No 109
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.52 E-value=2e-07 Score=60.22 Aligned_cols=44 Identities=25% Similarity=0.489 Sum_probs=35.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.+...|. ...+..|+.++|.|.|.|+|.|.|+|++ ||..|..
T Consensus 307 ~p~~~~~~~-~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~i~~ 350 (388)
T 2v5m_A 307 PLSAKIDPP-TQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGH 350 (388)
T ss_dssp EEEEEEESS-EEEECTTSCEEEEEEEEEECCCEEEEEE-TTEECSC
T ss_pred CCccccCCC-cEEecCCCCEEEEEEeccccCCeEEEEE-CCEECcc
Confidence 566666654 4556788899999999999999999998 7877643
No 110
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.51 E-value=7.3e-08 Score=58.83 Aligned_cols=43 Identities=9% Similarity=0.235 Sum_probs=34.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
+|.+...++..+.+.+|..++|.|.|.|.|.|.|+|++ +|..+
T Consensus 135 ~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k-~~~~~ 177 (250)
T 2fbo_J 135 SNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYT-GPTFF 177 (250)
T ss_dssp CSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEE-EEECS
T ss_pred CCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEe-CCCcc
Confidence 45555565666667778899999999999999999998 66554
No 111
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=2.4e-07 Score=51.57 Aligned_cols=48 Identities=21% Similarity=0.370 Sum_probs=36.9
Q ss_pred CCCCcceEEEcCCCc--EEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 6 DDTLGPIFIKEPPNR--IDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~--~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+|.++..|... +....|..+.|.|.+. .|.|.|+|++ ||..+..
T Consensus 6 ~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~ 55 (113)
T 2cpc_A 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTK-DGEEVVE 55 (113)
T ss_dssp CCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEE-TTEECCC
T ss_pred ccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEE-CCEECcc
Confidence 345577888776552 4456788899999996 8999999998 8877654
No 112
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.51 E-value=9e-08 Score=53.11 Aligned_cols=44 Identities=11% Similarity=0.238 Sum_probs=34.6
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
...+|.|++.| ..+.+..|..++|.|.+.|. |.|+|++ ||..+.
T Consensus 5 ~~~pp~~~~~~-~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~~~ 48 (108)
T 2dm7_A 5 SSGPARFTQDL-KTKEASEGATATLQCELSKV--APVEWKK-GPETLR 48 (108)
T ss_dssp SCCCCCBCSCC-BCCEEETTSCEEEEEEBSSS--CCCEEES-SSSBCC
T ss_pred cCCCCeeeecC-CcEEEeCCCcEEEEEEeCCC--CeeEEEE-CCEECC
Confidence 34678898875 44567788899999999987 7899998 666654
No 113
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.51 E-value=1.2e-07 Score=56.76 Aligned_cols=38 Identities=18% Similarity=0.424 Sum_probs=32.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc---CCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS---PNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~---P~P~I~W~~~ 48 (61)
-|.|+++| .++.+.+|..++|+|.+.|. |.|+|+|+|+
T Consensus 7 ~~~F~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kg 47 (126)
T 2dav_A 7 GILFIEKP-QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKG 47 (126)
T ss_dssp SCSCCSCC-CCCEEETTCCEEEEEEEECCCSSSCCEEEEEES
T ss_pred ccEEEEcC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeC
Confidence 47899997 55567889999999999886 9999999993
No 114
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.51 E-value=3.3e-07 Score=54.01 Aligned_cols=44 Identities=16% Similarity=0.282 Sum_probs=35.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC-CCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-~P~I~W~~~dg~~i~ 54 (61)
++.|...|.+ +.+..|+.++|.|.+.|.| .|.|+|++.||..+.
T Consensus 2 p~~v~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~ 46 (191)
T 1epf_A 2 VLQVDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS 46 (191)
T ss_dssp -CCEEEESSS-EEEETTCCEEEEEEECCCSCCCEEEEECTTSCEEC
T ss_pred ceEEEecCCC-cEEcCCCCEEEEEECCCCCCCceEEEEeCCCcccc
Confidence 4567777655 4567888999999999988 999999997887765
No 115
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.49 E-value=2.9e-07 Score=56.33 Aligned_cols=43 Identities=19% Similarity=0.363 Sum_probs=36.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i~ 54 (61)
+|.|+..|.... +.+|+.++|.|.+.|.|.| .|+|++ ||..+.
T Consensus 1 kP~i~~~p~~~~-v~~G~~v~l~C~~~~~~~~~~~~W~~-~g~~~~ 44 (262)
T 3rjd_A 1 KAVITLQPPWVS-VFQEETVTLHCEVLHLPGSSSTQWFL-NGTATQ 44 (262)
T ss_dssp CCEEEESSCCSE-EETTCCEEEEEECSSCCCTTCEEEEE-TTEECS
T ss_pred CCeEecCCCcEE-eeCCCeEEEEEECCCCCCCceEEEEE-CCEEee
Confidence 589999977754 5678889999999999999 999998 887764
No 116
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.49 E-value=2.5e-07 Score=54.45 Aligned_cols=44 Identities=25% Similarity=0.613 Sum_probs=35.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.|...| ....+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 100 ~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~ 143 (192)
T 2iep_A 100 KPKITRPP-INVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSALRE 143 (192)
T ss_dssp EEEEEECC-CCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred CCccccCC-cceEEeCCCcEEEEEEEeccCCceEEEEe-CCEEccC
Confidence 56677664 45556778889999999999999999998 7776643
No 117
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.49 E-value=2.6e-07 Score=59.73 Aligned_cols=45 Identities=22% Similarity=0.556 Sum_probs=36.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|.|+..+.. ..+..|..++|.|.|.|+|.|.|+|++ ||..+..
T Consensus 293 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~ 337 (382)
T 1cs6_A 293 AQPDWLDVITD-TEADIGSDLRWSCVASGKPRPAVRWLR-DGQPLAS 337 (382)
T ss_dssp EEEEEEECCCC-EEEETTCCEEEECEEEEESCCEEEEEE-TTEECCC
T ss_pred cCCCcccCCCc-cEEcCCCeEEEEEEeeeecCCEEEEEE-CCEECCC
Confidence 36788877554 456778889999999999999999998 7877654
No 118
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.48 E-value=2.2e-07 Score=64.19 Aligned_cols=48 Identities=25% Similarity=0.474 Sum_probs=38.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+..+.....+.+|..+.|.|.|.|+|.|.|+|++ ||..+...
T Consensus 288 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k-~~~~l~~~ 335 (570)
T 3b43_A 288 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQES 335 (570)
T ss_dssp BCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEE-TTEECCCS
T ss_pred ecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeE-CCEECCCC
Confidence 3578888876555445678889999999999999999998 77776543
No 119
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.47 E-value=4.6e-07 Score=56.35 Aligned_cols=44 Identities=16% Similarity=0.308 Sum_probs=36.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC-CCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-~P~I~W~~~dg~~i~ 54 (61)
+|.|..+|.+. .+..|+.++|.|.+.|.| .|.|+|++.||..+.
T Consensus 2 ~~~v~~~p~~~-~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~ 46 (291)
T 1qz1_A 2 VLQVDIVPSQG-EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS 46 (291)
T ss_dssp CCCEEEESSSE-EEETTCCEEEEEEESSCCSCCEEEEECTTSCBCC
T ss_pred CcceEecCCCc-eEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECc
Confidence 56788886554 567888999999999998 799999997887765
No 120
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.47 E-value=1.4e-07 Score=61.03 Aligned_cols=46 Identities=20% Similarity=0.445 Sum_probs=38.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|+..| ..+.+.+|+.++|.|.+.| .|.|.|+|++ ||..+..
T Consensus 4 ~~~P~~~~~p-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~ 50 (395)
T 1bih_A 4 DKYPVLKDQP-AEVLFRENNPTVLECIIEGNDQGVKYSWKK-DGKSYNW 50 (395)
T ss_dssp -CCCEECCCC-SEEEEETTSCEEECCCEESCCSSCEEEEEE-SSSBCCT
T ss_pred CCCCEeecCC-CceEEeCCCEEEEEEEEecCCCCceEEEEE-CCcCccc
Confidence 4689999885 4566778989999999999 9999999998 7776654
No 121
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=6.9e-08 Score=53.10 Aligned_cols=45 Identities=22% Similarity=0.527 Sum_probs=33.8
Q ss_pred CcceEEEcCC--CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPP--NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp--~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.++.|+...+ .++.+..|..++|.|.+. .|.|.|+|++ ||..+..
T Consensus 7 pp~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~ 53 (102)
T 2eo1_A 7 GKVVFAKEQPAHREVQAEAGASATLSCEVA-QAQTEVTWYK-DGKKLSS 53 (102)
T ss_dssp CCCCSCSSCCSCEEEEEETTCCEEECCBCS-CSSSCCEEEE-TTEECCC
T ss_pred CCEEecCcCCCcccEEEeCCCcEEEEEEec-CCCCceEEEE-CCEECCC
Confidence 3445655533 344667888999999999 8999999998 7877654
No 122
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.45 E-value=8.5e-07 Score=53.89 Aligned_cols=47 Identities=21% Similarity=0.490 Sum_probs=37.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC---CCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS---DGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~---dg~~i~ 54 (61)
...|.+...++....+..|..+.|.|.+.|.|.|.|+|++. ||..+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~ 160 (241)
T 3grw_A 111 PHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVG 160 (241)
T ss_dssp CCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSC
T ss_pred CCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccC
Confidence 34566777666777777888999999999999999999984 555543
No 123
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.45 E-value=9.9e-08 Score=64.42 Aligned_cols=46 Identities=17% Similarity=0.340 Sum_probs=37.9
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
..+..|.+....+..+.+.+|..++|.|.|.|+|.|.|+|+++++.
T Consensus 380 ~~C~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~ 425 (477)
T 2id5_A 380 FTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKH 425 (477)
T ss_dssp SCCEEEEESCCSCEEEEEETTCCEEECCCEEEESCCEEEEECTTSC
T ss_pred eEeccccccccccccEEEeCCCeEEEEEeccccCCCEEEEEECCcc
Confidence 4566787777666777788999999999999999999999984433
No 124
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.44 E-value=4.9e-07 Score=55.48 Aligned_cols=46 Identities=13% Similarity=0.317 Sum_probs=37.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~i~~ 55 (61)
...|.+..+|+.. .+.+|+.++|.|.+.|.|.|. |+|++ ||..+..
T Consensus 5 ~p~p~i~~~p~~~-~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~ 51 (204)
T 3sgj_C 5 LPKAVVFLEPQWY-RVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISS 51 (204)
T ss_dssp -CBCEEEEESCCS-EEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESC
T ss_pred CCCCeEEEcCCCe-EEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEccc
Confidence 4578899997764 456788899999999999987 99998 7877653
No 125
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.44 E-value=2.9e-07 Score=55.36 Aligned_cols=45 Identities=24% Similarity=0.462 Sum_probs=34.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~~i~ 54 (61)
..+|.+...++... ...|..++|.|.|.| .|.|.|+|++ ||..+.
T Consensus 112 ~~~p~v~~~~~~~~-~~~g~~v~l~C~~~g~~P~~~v~W~k-~g~~~~ 157 (213)
T 3nl4_L 112 PVAPTVLIFPPSAD-LVATGTVTIVCVANKYFPDVTVTWEV-DGTTQT 157 (213)
T ss_dssp CBCCEEEEECCCHH-HHTTSEEEEEEEEEEEBSCCEEEEEE-TTEECC
T ss_pred CcCCeEEEeCCchh-hccCCcEeEEEEEecccCCcEEEEEe-CCccCC
Confidence 45677766655543 345778999999999 9999999998 777764
No 126
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.43 E-value=2.7e-07 Score=54.00 Aligned_cols=44 Identities=25% Similarity=0.519 Sum_probs=32.3
Q ss_pred cceEEEcCCC-cEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPN-RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~-~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
+|.+...+.. ...+..|..+.|.|.+.|+|.|.|+|++ ||..+.
T Consensus 96 ~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~~~~ 140 (189)
T 2v5t_A 96 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIE 140 (189)
T ss_dssp EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEE-TTEECC
T ss_pred CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEE-CCEECc
Confidence 3444443222 3455678889999999999999999998 777664
No 127
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.43 E-value=2.9e-07 Score=50.08 Aligned_cols=37 Identities=19% Similarity=0.497 Sum_probs=29.3
Q ss_pred cCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 16 EPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 16 ~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+|..+.+..|..+.|.|.+.| .|.|+|++ ||..+..
T Consensus 6 ~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k-~g~~~~~ 42 (95)
T 4hwu_A 6 SQPEAYVVAPGESLELQCMLKD--AAVISWTK-DGVHLGP 42 (95)
T ss_dssp --CEEEEECTTSCEEEECCCCT--TCEEEEEE-TTEEECC
T ss_pred cCCCcEEECCCCEEEEEEEeCC--CCEEEEEE-CCEECCC
Confidence 3456667788999999999998 58999998 8877754
No 128
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.42 E-value=6.4e-07 Score=53.08 Aligned_cols=44 Identities=11% Similarity=0.271 Sum_probs=33.8
Q ss_pred CcceEEEcCCCcEEecC-CCCeEEEEEecccCC--CeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSN-TTGAQVECTARGSPN--PEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~-g~~v~L~C~A~G~P~--P~I~W~~~dg~~i~~ 55 (61)
.+|.|+.. ++. .+.+ |+.+.|.|.+.|.|. |.|+|++ ||..+..
T Consensus 2 ~~P~i~~~-~~~-~v~~~G~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~~ 48 (190)
T 2wv3_A 2 NEPRIVTS-EEV-IIRDSLLPVTLQCNLTSSSHTLMYSYWTK-NGVELTA 48 (190)
T ss_dssp -CCEEEEC-CCE-ECCCSSSCEEEEEEEEECSSCEEEEEEEE-TTEECTT
T ss_pred CCCccccc-ceE-EEccCCceEEEEEEeccCCCCceEEEEEE-CCEECcc
Confidence 36788774 443 4555 888999999999998 8999998 7777643
No 129
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.41 E-value=7e-07 Score=55.50 Aligned_cols=44 Identities=27% Similarity=0.474 Sum_probs=34.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.+|.|...|. ...+.+|+.+.|.|.+.|.|.|.|+|++ +|..+.
T Consensus 99 ~~~~~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~ 142 (291)
T 1qz1_A 99 QKLMFKNAPT-PQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVI 142 (291)
T ss_dssp CCSEEEECCS-SEEEETTSCEEECCEEECSSCCEEEEEE-TTSCSS
T ss_pred ccccccCCCC-cccccCCCeEEEEEEeccCCCCEEEEEE-CCEEcc
Confidence 3567777754 4456788899999999999999999998 665543
No 130
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.39 E-value=6.5e-07 Score=52.09 Aligned_cols=46 Identities=20% Similarity=0.413 Sum_probs=36.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccC-CCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-~P~I~W~~~dg~~i~~ 55 (61)
.-.|.+..+|+... +.+|+.++|.|.+.|.| .+.|+|++ ||..+..
T Consensus 2 ~p~p~i~~~p~~~~-v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~ 48 (170)
T 3ry4_A 2 PPKAVLKLEPPWIN-VLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPT 48 (170)
T ss_dssp CCBCEEEEESCCSE-EETTCEEEEEEESCCCSSSSCEEEEE-TTEECTT
T ss_pred CCCCEEEeCCCCeE-EECCCcEEEEEEecCCCCcceEEEEE-CCeEccc
Confidence 34678888876554 55788899999999998 78999998 8877654
No 131
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.39 E-value=4.5e-07 Score=54.54 Aligned_cols=33 Identities=30% Similarity=0.568 Sum_probs=27.8
Q ss_pred EecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 22 DFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 22 ~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....|..++|.|.|.|.|.|.|+|++++|..+.
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 345677899999999999999999997677654
No 132
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.38 E-value=4.3e-07 Score=58.79 Aligned_cols=44 Identities=25% Similarity=0.657 Sum_probs=35.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.+|.|...|. .+.+..|..++|.|.+.|+|.|.|+|++ ||..+.
T Consensus 311 ~~p~~~~~~~-~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~~~ 354 (403)
T 3laf_A 311 VPPWFLNHPS-NLYAYESMDIEFECAVSGKPVPTVNWMK-NGDVVI 354 (403)
T ss_dssp EEEEEEECCC-CEECCTTCCEEECCEEEEESCCEEEEEE-TTEECC
T ss_pred CCCcEeecCc-ceEEecCCeEEEEEEEeeccCCEEEEEE-CCEECC
Confidence 3677877754 4556778889999999999999999998 777654
No 133
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.37 E-value=4.5e-07 Score=61.47 Aligned_cols=44 Identities=5% Similarity=0.047 Sum_probs=33.7
Q ss_pred cceEEEcCC-CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPP-NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp-~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
+|.+...|. ..+.+.+|..+.|.|.|.|+|.|+|+|++ ||..|.
T Consensus 324 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k-~g~~l~ 368 (423)
T 3qs7_E 324 KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFP 368 (423)
T ss_dssp SCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEE
T ss_pred CCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE-CCEECC
Confidence 455655543 34556678889999999999999999998 788774
No 134
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.36 E-value=2.8e-07 Score=54.57 Aligned_cols=41 Identities=12% Similarity=0.430 Sum_probs=32.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
+.++..++..+.+.+|+.+.|.|.+.|.|.|.|+|+++++.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~ 44 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGD 44 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETT
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCc
Confidence 44455556667777898999999999999999999995543
No 135
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.36 E-value=9.5e-07 Score=52.93 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=34.0
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+|.|..+|.. .+..|+.++|.|.|.| |.|.++|++ ||..+
T Consensus 3 ~~~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 44 (196)
T 3p2t_A 3 LPKPTLWAEPGS--VISWGNSVTIWCQGTL-EAREYRLDK-EESPA 44 (196)
T ss_dssp BCCCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEE-TTSCS
T ss_pred CCCCEEEccCCC--cCCCCCcEEEEeeCCC-CCCEEEEEE-CCCCC
Confidence 457899999765 3567888999999999 889999998 55544
No 136
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.36 E-value=7.9e-07 Score=52.57 Aligned_cols=46 Identities=15% Similarity=0.331 Sum_probs=36.8
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~i~ 54 (61)
...+|.+..+|.... +.+|+.++|.|.+.|.|.|. ++|++ ||..+.
T Consensus 4 ~~~~p~i~~~p~~~~-v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~ 50 (175)
T 1fnl_A 4 DLPKAVVFLEPQWYS-VLEKDSVTLKCQGAYSPEDNSTQWFH-NESLIS 50 (175)
T ss_dssp CCCCCEEEEESCCSE-EETTCCEEEEEECCCBTTBCCCEEEE-TTEEEE
T ss_pred CCCCCEEEEcCCcee-eeCCCcEEEEeeCCCCCCCcceEEEE-CCEEcc
Confidence 346789999976643 56788899999999999888 89998 776654
No 137
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.36 E-value=5.6e-07 Score=53.22 Aligned_cols=35 Identities=14% Similarity=0.376 Sum_probs=29.1
Q ss_pred cEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 20 RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 20 ~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+.+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~ 147 (197)
T 2j8h_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDN 147 (197)
T ss_dssp EEEEETTCCCEEEEEEEEESCCEEEEEE-SSCEECS
T ss_pred eEEEeCCCEEEEEEEEEecCCCcEEEEE-CCEEeec
Confidence 3456678889999999999999999998 7777653
No 138
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.35 E-value=1.2e-06 Score=51.53 Aligned_cols=44 Identities=16% Similarity=0.290 Sum_probs=34.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccC-CCeEEEEe---CCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIR---SDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-~P~I~W~~---~dg~~i 53 (61)
.+|.|...+ ....+..|..++|.|.+.|+| .|.|+|++ +++..+
T Consensus 82 ~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~ 129 (184)
T 3b5h_A 82 GPPRVKAVK-SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKAL 129 (184)
T ss_dssp CSCCCEESC-SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEEC
T ss_pred cCCceeecC-CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEe
Confidence 467777775 444567788999999999999 89999999 455444
No 139
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.35 E-value=5.1e-07 Score=57.22 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=35.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~i 53 (61)
.+|.|...++....+..|..+.|.|.|.|+|.|. |+|++ +|..+
T Consensus 230 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~-~~~~~ 274 (331)
T 3u83_A 230 YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTT-LNGSL 274 (331)
T ss_dssp EEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred cCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEE-CCCcc
Confidence 4677776666666677888999999999999999 99998 44443
No 140
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.35 E-value=9.4e-07 Score=59.54 Aligned_cols=48 Identities=19% Similarity=0.512 Sum_probs=38.9
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
...+.+|.+...| ..+.+.+|..++|.|.| |.|.|.|+|++.+|..+.
T Consensus 336 ~~~C~~P~i~~~~-~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~ 383 (440)
T 3zyj_A 336 YFTCYAPVIVEPP-ADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMT 383 (440)
T ss_dssp CSCCCCCCEEECC-CCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEE
T ss_pred hccCCCCcccccc-cceeeccCceEEEEeec-CCCCCceEEEeCCCceee
Confidence 3456789998874 55667889999999999 679999999997877654
No 141
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.34 E-value=2.3e-07 Score=54.66 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=36.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEE-ecccCC-CeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECT-ARGSPN-PEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~-A~G~P~-P~I~W~~~dg~~i 53 (61)
..|.|..+++..+.+.+|+.+.|.|. +.|.|. |.|+|++ ||..+
T Consensus 6 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~-~~~~~ 51 (201)
T 3s97_C 6 YLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLL-NEFPV 51 (201)
T ss_dssp EECCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEE-SSTTC
T ss_pred cCCccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEE-CCcee
Confidence 34667777778888889999999999 999999 9999998 55444
No 142
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.34 E-value=6.9e-07 Score=49.87 Aligned_cols=36 Identities=17% Similarity=0.370 Sum_probs=29.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+...+|..++|.|.+.|.|.|.|.|++.+
T Consensus 4 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (108)
T 1jhl_L 4 LTQS-PSYLVASPGETITINCRASKSISKSLAWYQEK 39 (108)
T ss_dssp EEEE-CSEEEECTTSCEEEEEEESSCCTTCEEEEEEC
T ss_pred eecc-CCeeEEcCCCCEEEEeEECCCCCceEEEEEEC
Confidence 4555 45566778999999999999999999999854
No 143
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.34 E-value=1.5e-07 Score=59.36 Aligned_cols=43 Identities=26% Similarity=0.510 Sum_probs=34.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDG 50 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg 50 (61)
..+|.|...+.....+.+|+.++|.|.|.|+|+| .|+|+++++
T Consensus 209 ~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~ 252 (308)
T 4fom_A 209 QYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDG 252 (308)
T ss_dssp CEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSS
T ss_pred ecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCe
Confidence 3467777777776677788889999999999999 699998544
No 144
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.34 E-value=3.5e-07 Score=56.30 Aligned_cols=46 Identities=24% Similarity=0.354 Sum_probs=33.0
Q ss_pred CCCcceEEEcCCCcEE-ecCCCCeEEEEEeccc---CC-CeEEEEeCCCeee
Q psy11557 7 DTLGPIFIKEPPNRID-FSNTTGAQVECTARGS---PN-PEIIWIRSDGTAV 53 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~-~~~g~~v~L~C~A~G~---P~-P~I~W~~~dg~~i 53 (61)
...+|.+...|++... +..|+.++|.|.|.|. |. |.|+|++ +|..+
T Consensus 6 ~~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~ 56 (218)
T 2rgs_A 6 LEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFV-NNVEV 56 (218)
T ss_dssp ---CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEE-TTEEE
T ss_pred CCCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEE-CCccc
Confidence 4567777666777543 5678899999999998 44 8999999 55544
No 145
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.33 E-value=1e-06 Score=51.62 Aligned_cols=36 Identities=11% Similarity=0.265 Sum_probs=29.7
Q ss_pred CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 19 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
....+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 111 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~-~~~~~~~ 146 (197)
T 3lcy_A 111 EKYYGAVGSTLRLHVMYIGRPVPAMTWFH-GQKLLQN 146 (197)
T ss_dssp SEEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred cceeecCCCeEEEEEEEeeeeCCeeEEeE-CCEECCC
Confidence 34455678889999999999999999998 7777654
No 146
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.33 E-value=1.9e-06 Score=55.77 Aligned_cols=48 Identities=21% Similarity=0.396 Sum_probs=36.6
Q ss_pred cCCCCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCCeEEEEeCCCeeec
Q psy11557 5 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 5 ~~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~~i~ 54 (61)
........|..+|++. .+.+|+.++|.|.+.| .|.|.|+|++ ||..+.
T Consensus 16 ~~~~~~~~~~~~P~~~-~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~ 64 (403)
T 3laf_A 16 HGGRRSLHFVSEPSDA-VTMRGGNVLLNCSAESDRGVPVIKWKK-DGLILA 64 (403)
T ss_dssp ---CCSSEEEECCCCE-EECTTCCEEECCEEECTTCCCEEEEEE-TTEECC
T ss_pred cCCceeEEEEeCCCce-EEecCCcEEEEEEcCCCCCCceEEEEE-CCEECc
Confidence 3445566888886655 5667889999999987 6899999998 887764
No 147
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.32 E-value=1.2e-06 Score=52.52 Aligned_cols=45 Identities=20% Similarity=0.420 Sum_probs=34.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC---CCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS---DGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~---dg~~i 53 (61)
.+|.+....+....+..|..+.|.|.+.|+|.|.|+|++. ||..+
T Consensus 116 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~ 163 (231)
T 3ojm_B 116 HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKY 163 (231)
T ss_dssp CCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSB
T ss_pred CCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccc
Confidence 3455555555666677888899999999999999999983 56554
No 148
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.32 E-value=3.6e-07 Score=51.33 Aligned_cols=34 Identities=15% Similarity=0.464 Sum_probs=26.6
Q ss_pred CCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
|+..+.. .|+.++|+|.|.|.|. |+|++ ||..|.
T Consensus 6 p~~~v~~-~G~~v~L~C~~~g~P~--i~W~k-dg~~l~ 39 (82)
T 3r08_E 6 IEYKVSI-SGTSVELTCPLDSDEN--LKWEK-NGQELP 39 (82)
T ss_dssp CCCEEEE-ETTEEEEECSSCCCSS--CEEEE-TTEECT
T ss_pred CceeEEE-cCCeEEEEEECCCCCc--EEEEE-CCEECc
Confidence 4445544 5778999999999984 99998 787774
No 149
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.31 E-value=6.5e-07 Score=56.02 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=36.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEec-ccCCCeEEEEeCCCeeecCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~-G~P~P~I~W~~~dg~~i~~~ 56 (61)
.|.|...++....+..|..+.|.|.+. |.|.|.|+|++ ||..+...
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~i~~~ 152 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEG 152 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEE-TTEEECSS
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEE-CCEECeeC
Confidence 555555544466677888999999999 99999999998 77777543
No 150
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.31 E-value=6.4e-07 Score=54.47 Aligned_cols=43 Identities=26% Similarity=0.497 Sum_probs=30.9
Q ss_pred ceEEEcCCCcEE-ecCCCCeEEEEEecccCC--C--eEEEEeCCCeeec
Q psy11557 11 PIFIKEPPNRID-FSNTTGAQVECTARGSPN--P--EIIWIRSDGTAVG 54 (61)
Q Consensus 11 P~f~~~Pp~~~~-~~~g~~v~L~C~A~G~P~--P--~I~W~~~dg~~i~ 54 (61)
|.+...|++... +..|+.++|.|.+.|.|+ | .|+|++ ||..+.
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k-~~~~~~ 49 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVH 49 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEE-TTEEEC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEE-CCcccc
Confidence 444445566544 357888999999999863 4 999998 666553
No 151
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.31 E-value=1e-06 Score=54.15 Aligned_cols=46 Identities=17% Similarity=0.369 Sum_probs=33.8
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
...+|.+...++.... ..|..++|.|.|.| .|.| +|+|++ ||..+.
T Consensus 114 ~~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 161 (218)
T 2rgs_A 114 LVRAPQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVEWTS-NGHTEE 161 (218)
T ss_dssp CCBCCEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCCCCEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEEEEE-CCEecc
Confidence 3456777666555443 34777999999999 6877 999998 777663
No 152
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.30 E-value=2e-06 Score=53.39 Aligned_cols=44 Identities=23% Similarity=0.230 Sum_probs=35.4
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~~i~ 54 (61)
.+|.|...|... .+..|..+.|.|.+.| .|.|.|+|++ +|..+.
T Consensus 185 ~~p~i~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~~ 229 (289)
T 3ejj_X 185 EPPQIKLEPSKL-VRIRGEAAQIVCSATNAEVGFNVILKR-GDTKLE 229 (289)
T ss_dssp CCCEEEEESSSE-ECCSSSCEEEEEEEEESSSCCEEEEEE-TTEECC
T ss_pred CCCeEEecCCce-EEEeCCcEEEEEEeCCCCCceEEEEEE-CCEEee
Confidence 578888885554 4567888999999999 8999999998 666553
No 153
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.30 E-value=7.2e-07 Score=52.87 Aligned_cols=39 Identities=15% Similarity=0.417 Sum_probs=31.4
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
.|... +..+.+.+|+.+.|.|.+.|.|.|.|+|+++++.
T Consensus 3 ~v~~~-~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~ 41 (212)
T 1f97_A 3 SVYTA-QSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGS 41 (212)
T ss_dssp EEECS-CSEEEEETTCCEEEECEEESCSSEEEEEEEEETT
T ss_pred eEEec-CCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCc
Confidence 34444 6666778899999999999999999999995443
No 154
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.30 E-value=1.3e-06 Score=52.56 Aligned_cols=46 Identities=17% Similarity=0.430 Sum_probs=33.6
Q ss_pred CcceEEEcCCCcEEecCCCCe-EEEEEe-cccCCCeEEEEeCCCeeecCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGA-QVECTA-RGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v-~L~C~A-~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..|.|...+ ..+.+..|..+ +|.|.| .|.|.|.|+|++ ||..+...
T Consensus 117 ~~~~~~~~~-~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~~~~~~~ 164 (231)
T 2pet_A 117 EATEVSPNK-GTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NGQRLEVP 164 (231)
T ss_dssp CCCEEEECC-SSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TTEECCCC
T ss_pred CCcEEecCC-cceeecCCCceEEEEEEeECcccCCEEEEEE-CCccCccc
Confidence 346666664 33344566666 999999 999999999998 77776543
No 155
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.30 E-value=1.8e-06 Score=50.77 Aligned_cols=42 Identities=21% Similarity=0.406 Sum_probs=34.0
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.|+.. +..+.+..|+.+.|.|.+.|.|. .|+|++.||..+..
T Consensus 4 ~~~~~-~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~ 45 (189)
T 2v44_A 4 QVTIS-LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIS 45 (189)
T ss_dssp EEEES-CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCC
T ss_pred EEEec-CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCC
Confidence 45666 55666778989999999999998 99999978877644
No 156
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.29 E-value=1.2e-06 Score=56.63 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=34.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.|... +..+.+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 100 ~P~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~l~~ 143 (389)
T 2jll_A 100 APKFISN-QTIYYSWEGNPINISCDVKSNPPASIHWRR-DKLVLPA 143 (389)
T ss_dssp EEEECCS-CCEEEECTTCCEEEEECEEEESCCEEEEEE-TTEESSC
T ss_pred CCEEecC-cceEEeccCCEEEEEEEEEecCCCeEEEEE-CCccCCc
Confidence 5666654 444456678889999999999999999998 7777653
No 157
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.29 E-value=1.1e-06 Score=54.89 Aligned_cols=42 Identities=17% Similarity=0.502 Sum_probs=33.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i~ 54 (61)
+|.|+..+. ..+..|..+.|.|.+.|.|.| .|+|++ ||..+.
T Consensus 222 ~p~~~~~~~--~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~g~~~~ 264 (312)
T 2y23_A 222 GPHFVEYLS--WEVTGECNVLLKCKVANIKKETHIVWYK-DEREIS 264 (312)
T ss_dssp SSEEEEEEE--EEEETTTEEEEEEEEESCCSSCEEEEEE-TTEEEE
T ss_pred CCceeecce--EEEeCCCEEEEEEEEcCCCCCCEEEEee-CCEECC
Confidence 477775433 456688889999999999999 999998 887775
No 158
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.29 E-value=2.8e-07 Score=58.65 Aligned_cols=45 Identities=20% Similarity=0.462 Sum_probs=34.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC---CCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS---DGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~---dg~~i 53 (61)
.+|.|....+....+..|..+.|.|.|.|+|.|.|+|++. ||..+
T Consensus 220 ~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~ 267 (334)
T 1ry7_B 220 HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKV 267 (334)
T ss_dssp SSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSB
T ss_pred CCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccc
Confidence 3455655545556677888899999999999999999985 55554
No 159
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.28 E-value=1.7e-06 Score=51.94 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=34.0
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+|.|...|.. .+.+|+.++|.|.|.|.|. .|+|++ ||..+
T Consensus 3 ~~~P~i~~~p~~--~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~ 44 (196)
T 2d3v_A 3 LSKATLWAEPGS--VISRGNSVTIRCQGTLEAQ-EYRLVK-EGSPE 44 (196)
T ss_dssp CCBCEEEEESCS--EEETTCCEEEEEECCTTCC-EEEEEE-TTCSS
T ss_pred CCCCEEEeCCCC--cccCCCeEEEEEeCCCCCc-EEEEEE-CCCCC
Confidence 457999999764 4567889999999999886 999998 66544
No 160
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.28 E-value=9.1e-07 Score=52.56 Aligned_cols=43 Identities=33% Similarity=0.688 Sum_probs=32.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEe-cccCCCeEEEEeCCCeeecC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~~ 55 (61)
|.|...| ....+..|..++|.|.+ .|.|.|.|+|++ ||..+..
T Consensus 112 ~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~l~~ 155 (212)
T 2v9r_A 112 DDFRQNP-SDVMVAVGEPAVMECQPPRGHPEPTISWKK-DGSPLDD 155 (212)
T ss_dssp SSCSBCC-CCEEEETTSCEEEECBCCCEESCCEEEEEE-TTEEECT
T ss_pred ccceeCC-CceEecCCCcEEEEEecCCCCCCCEEEEEE-CCccCCC
Confidence 3344443 34456778889999999 999999999998 7777653
No 161
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.27 E-value=7.2e-07 Score=55.14 Aligned_cols=44 Identities=14% Similarity=0.105 Sum_probs=33.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEec-ccCCCeEEEEeCCCeeecCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~-G~P~P~I~W~~~dg~~i~~~ 56 (61)
.|.|+... ++.+.+|..+.|.|.+. |+|.|+|+|++ ||.+|...
T Consensus 3 ~p~~~~~~--~~~v~eg~~v~l~c~~~~~~P~p~i~W~k-ng~~l~~~ 47 (207)
T 3rbs_A 3 DPFTKSEL--AVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEG 47 (207)
T ss_dssp ---CCEEE--EEEECGGGCEEEEEECSCCCSCCEEEEEE-TTEEECSS
T ss_pred CCeeecCC--ceEEEeCCeEEEEEEEecCCCCCEEEEEE-CCEECccC
Confidence 46777753 45677888899999996 58999999998 88888543
No 162
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.27 E-value=8.3e-07 Score=53.31 Aligned_cols=43 Identities=33% Similarity=0.694 Sum_probs=33.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEe-cccCCCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~ 54 (61)
+|.|...| ....+..|..++|.|.+ .|.|.|.|+|++ ||..+.
T Consensus 108 ~~~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~g~~~~ 151 (217)
T 2vr9_A 108 RDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWIK-DGVPLD 151 (217)
T ss_dssp CCSCSBCC-CCEEECTTSCEEECCBCCCEESCCEEEEEE-TTEEEC
T ss_pred CCCcEECC-CccEEcCCCeEEEEEECCCCCCCCeEEEEE-CCcCCC
Confidence 34455554 34556788889999999 999999999998 787776
No 163
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.27 E-value=1e-07 Score=66.47 Aligned_cols=47 Identities=28% Similarity=0.549 Sum_probs=0.0
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
..+|.|+..+.+ ..+..|..+.|.|.|.|+|.|+|+|++ ||..|...
T Consensus 664 ~~~P~~~~~~~~-~~v~~g~~~~l~C~~~g~P~p~v~W~k-~g~~l~~~ 710 (772)
T 3v2a_R 664 RVAPTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVED 710 (772)
T ss_dssp -------------------------------------------------
T ss_pred cCCCEeecCCCc-eEEeCCCCEEEEEEeCccCCCeEEEEE-CCeECcCC
Confidence 457888887654 456678889999999999999999998 77766543
No 164
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.26 E-value=1.5e-06 Score=52.20 Aligned_cols=37 Identities=14% Similarity=0.343 Sum_probs=30.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
|.+++.| ..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 2 ~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3nl4_L 2 VVMTQTP-ASVSEPVGGTVTIKCQASQSISSYLAWYQQ 38 (213)
T ss_dssp CCEEEEC-SEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ccEEeCC-CeEEEcCCCCEEEEEEecCCCCceEEEEEE
Confidence 4566664 555677898999999999999999999984
No 165
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.26 E-value=1.5e-06 Score=54.05 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=36.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..|.|+..|. .+.+..|+.++|.|.+.|.|. .|+|++.||..+..
T Consensus 3 ~~p~v~~~~~-~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~ 47 (291)
T 2wim_A 3 ALLQVTISLS-KVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIIS 47 (291)
T ss_dssp CCCEEEESCS-EEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCC
T ss_pred CCceEEEecc-ceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccC
Confidence 4688998854 556778889999999999985 99999988877643
No 166
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.26 E-value=8.8e-07 Score=55.27 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=31.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
.+|.+...|... .+..|+.+.|.|.|.|+|.|.|+|++
T Consensus 180 ~~p~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~v~W~~ 217 (289)
T 3mjg_X 180 SSINVSVNAVQT-VVRQGENITLMCIVIGNEVVNFEWTY 217 (289)
T ss_dssp CCCCCEEEESCS-EEETTSCEEEEEEEESCSSBEEEEEC
T ss_pred CCCCcEEeCCcc-eeEcCCCEEEEEEECCCCCcceEEEc
Confidence 466777775554 45678899999999999999999997
No 167
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.26 E-value=9.2e-07 Score=57.60 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=36.5
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
.+.+|.|...|... .+.+|+.++|.|.|.|.|.|.|+|+++++.
T Consensus 155 ~c~~P~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~ 198 (347)
T 2ifg_A 155 SCGVPTLKVQVPNA-SVDVGDDVLLRCQVEGRGLEQAGWILTELE 198 (347)
T ss_dssp TCCCCEEEEECCSS-CCBTTCCEEEEEEEECSSCCCCCEEESCCC
T ss_pred cCCCCceeccCCce-EEeCCCcEEEEEEEecCCCCEEEEEcCCce
Confidence 45689999886554 567888999999999999999999996544
No 168
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.25 E-value=1.9e-06 Score=52.45 Aligned_cols=43 Identities=21% Similarity=0.256 Sum_probs=33.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCC--CeEEEEeCCCee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSDGTA 52 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~--P~I~W~~~dg~~ 52 (61)
..|.+...|+..+.+..|+.++|.|.|.|.|. +.|+|++ +|..
T Consensus 103 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~g~~ 147 (213)
T 2x1w_L 103 RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSK 147 (213)
T ss_dssp CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEEC-SCSS
T ss_pred cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEe-cCCc
Confidence 35667777777766778989999999999664 5899998 4443
No 169
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.25 E-value=2.4e-06 Score=60.72 Aligned_cols=47 Identities=21% Similarity=0.423 Sum_probs=39.0
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~~ 56 (61)
...|.|+..+. ++....|.++.|.|...|.|.|+|+|++ ||..|...
T Consensus 480 ~~~P~~~~~~~-~~~v~~G~~~~~~~~v~g~P~P~v~W~k-~~~el~~s 526 (573)
T 3uto_A 480 EAQPRFIVKPY-GTEVGEGQSANFYCRVIASSPPVVTWHK-DDRELKQS 526 (573)
T ss_dssp GGSCEEEECCC-CEEECTTSCEEEEEEEECSSCCEEEEEE-TTEECCSS
T ss_pred ccCCccccCCC-CcEEeCCCcEEEEEEEEccCCCeEEEEE-CCEEcccC
Confidence 45789998854 4567889999999999999999999998 77777643
No 170
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.25 E-value=2.7e-06 Score=50.81 Aligned_cols=40 Identities=8% Similarity=-0.021 Sum_probs=32.8
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
...+|.|...|.. .+.+|+.++|.|.+.| |.|.++|++++
T Consensus 5 ~~~~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~W~k~g 44 (184)
T 2gi7_A 5 PLPKPSLQALPSS--LVPLEKPVTLRCQGPP-GVDLYRLEKLS 44 (184)
T ss_dssp CBCCCEEEEESCS--EEETTCCEEEEEECST-TCSEEEEEETT
T ss_pred CCCCCeEEeCCCc--cccCCCcEEEEEeCCC-CCCEEEEEECC
Confidence 4567899988664 4567889999999999 89999999843
No 171
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.25 E-value=1.4e-06 Score=60.21 Aligned_cols=43 Identities=16% Similarity=0.400 Sum_probs=33.5
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+.+...| ....+..|..++|.|.|.|+|.|.|+|++ ||.+|..
T Consensus 560 ~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~i~~ 602 (642)
T 1e07_A 560 DTPIISP-PDSSYLSGANLNLSCHSASNPSPQYSWRI-NGIPQQH 602 (642)
T ss_pred CcceecC-CceeEEcCCcEEEEEEeccCCCCeEEEEE-CCEECcc
Confidence 3455554 34556678889999999999999999998 8887653
No 172
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.24 E-value=1.4e-06 Score=52.26 Aligned_cols=35 Identities=14% Similarity=0.426 Sum_probs=29.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
+++. |..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 4 v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3d9a_L 4 LTQS-PATLSVTPGNSVSLSCRASQSIGNNLHWYQQ 38 (213)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred EEeC-CccEEEeCCCcEEEEEECCCCCCCCEEEEEe
Confidence 4454 4556678899999999999999999999974
No 173
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.24 E-value=1.1e-06 Score=54.35 Aligned_cols=44 Identities=30% Similarity=0.544 Sum_probs=31.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
+|.+...++....+..|..++|.|.|.|. |.| .|+|++ ||..+.
T Consensus 120 ~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~~~ 165 (238)
T 1bec_A 120 PPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV-NGKEVH 165 (238)
T ss_dssp CCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE-TTEEEC
T ss_pred CCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEE-CCEECC
Confidence 56555443443334567789999999996 766 999998 887764
No 174
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.23 E-value=4.5e-07 Score=55.82 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=31.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~~ 55 (61)
.|.+...++....+..|..++|.|.|.|.|+| .|+|++ ||..|..
T Consensus 124 ~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 170 (246)
T 4dzb_B 124 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 170 (246)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE-CCEECCC
Confidence 45444443444334457789999999998865 899998 8887753
No 175
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.22 E-value=1.3e-06 Score=54.58 Aligned_cols=43 Identities=12% Similarity=0.251 Sum_probs=34.5
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCe
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGT 51 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~ 51 (61)
..+|.|...|... .+..|+.++|.|.|.|.|.|. |+|++++..
T Consensus 186 ~~~P~i~~~~~~~-~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 186 KAIPVVSVPETSH-LLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp CSCCEEECSCSBC-CCCTTCCEEEEEEEEESSTTCEEEEEEESSS
T ss_pred CCCCccccCCCcc-eEecCCcEEEEEEEecCCcceeEEEecCCCC
Confidence 3678888776554 567888999999999999997 999994443
No 176
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.21 E-value=1.5e-06 Score=52.16 Aligned_cols=44 Identities=18% Similarity=0.344 Sum_probs=33.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~dg~~i~ 54 (61)
.+|.+...|+..... .|..++|.|.|.|. |.|.|+|++ ||..+.
T Consensus 110 ~~P~v~~~~~~~~~~-~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 155 (211)
T 3tv3_L 110 AAPSVTLFPPSSEEL-QANKATLVCLISDFYPGAVTVAWKA-DSSPVK 155 (211)
T ss_dssp BCCEEEEECCCHHHH-HTTCEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred cCCeeEecCCchhhh-cCCCeEEEEEeeeecCCCeEEEEEE-CCeecC
Confidence 577777776555433 57789999999996 468999998 888774
No 177
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.21 E-value=1.2e-06 Score=52.54 Aligned_cols=44 Identities=27% Similarity=0.506 Sum_probs=33.1
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
.+|.+...++.... ..|..++|.|.|.|. |+ +.|+|++ ||..+.
T Consensus 113 ~~P~i~~~~~~~~~-~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 158 (213)
T 3mj8_L 113 AAPSVTLFPPSSEE-LKTNQATLVCMINGFYPADVAVTWEA-DGTPIT 158 (213)
T ss_dssp BCCEEEEECCCHHH-HTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCCeEEccCCCccc-ccCCcEEEEEEeeceeCCCeEEEEEc-CCcccC
Confidence 56777777655543 367789999999997 44 3999998 888774
No 178
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.20 E-value=3.3e-06 Score=50.60 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=33.7
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+|.|...|.. .+.+|+.++|.|.|.|.|. .|+|++ ||..+
T Consensus 3 ~~~P~i~~~p~~--~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~ 44 (198)
T 1ugn_A 3 LPKPTLWAEPGS--VITQGSPVTLRCQGGQETQ-EYRLYR-EKKTA 44 (198)
T ss_dssp CCCCEEEEESCS--EEETTCCEEEEEECCTTCC-CEEEEE-SSSCC
T ss_pred CCCCeEeccCCC--cccCCCcEEEEEEecCCCc-EEEEEE-CCccc
Confidence 457899988753 4567888999999999986 799998 66554
No 179
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.20 E-value=2.6e-06 Score=51.25 Aligned_cols=43 Identities=23% Similarity=0.596 Sum_probs=31.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEe-cccCCCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~ 54 (61)
.|.+...+.. .+..|..++|.|.+ .|.|.|.|+|++++|..+.
T Consensus 111 ~p~i~~~~~~--~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~ 154 (222)
T 4i0k_A 111 KPSMTLEPNK--DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLT 154 (222)
T ss_dssp CCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred CCcEEeCCCc--eecCCceEEEEEecccccCCCeEEEEcCCCccCC
Confidence 4677666533 34567789999999 8999999999987777653
No 180
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.19 E-value=1.5e-06 Score=52.31 Aligned_cols=43 Identities=30% Similarity=0.504 Sum_probs=31.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
+|.+...++..... .|..++|.|.|.| .|.| +|+|++ ||..+.
T Consensus 111 ~P~v~~~~~~~~~~-~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~~~ 155 (210)
T 1lk3_L 111 APTVSIFPPSTEQL-ATGGASVVCLMNNFYPRDISVKWKI-DGTERR 155 (210)
T ss_dssp CCEEEEECCCHHHH-TTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCeEEEECCchhhc-cCCcEEEEEEEEeEeCCceEEEEEe-CCccCC
Confidence 56666655554333 5667999999998 4554 899998 787764
No 181
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.19 E-value=1.5e-06 Score=52.15 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=22.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
+|.|...| .. .+.+|..++|.|.|.|.| |.|+|++ ||..+
T Consensus 100 ~p~i~~~~-~~-~v~~G~~v~L~C~~~~~p-~~~~W~k-~g~~~ 139 (196)
T 2d3v_A 100 KPTLSALP-SP-VVTSGENVTLQCGSRLRF-DRFILTE-EGDHK 139 (196)
T ss_dssp CCEEEC-------------CEEEEEESSCC-SEEEEEE-C---C
T ss_pred CCeEEccC-Cc-cccCCCcEEEEEEcCCCC-CEEEEEc-cCCcc
Confidence 56665553 32 356788899999999999 9999998 66544
No 182
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.18 E-value=2.1e-06 Score=52.58 Aligned_cols=46 Identities=22% Similarity=0.423 Sum_probs=31.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
..+|.+...++....+..|..++|.|.|.|. |. ++|+|++ ||..|.
T Consensus 104 ~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 151 (214)
T 1ow0_A 104 TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELP 151 (214)
T ss_dssp CCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEE-TTEECC
T ss_pred CCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEE-CCEECC
Confidence 3567665544443234467679999999995 54 4999998 777764
No 183
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.18 E-value=1.4e-06 Score=54.14 Aligned_cols=42 Identities=7% Similarity=-0.005 Sum_probs=33.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+|.|...|. . .+.+|+.++|.|.|.| |.|.|+|++ ||..+
T Consensus 7 ~~~P~i~~~p~-~-~v~~G~~vtL~C~~~~-~~~~~~W~k-~g~~~ 48 (218)
T 1uct_A 7 FPMPFISAKSS-P-VIPLDGSVKIQCQAIR-EAYLTQLMI-IKNST 48 (218)
T ss_dssp SCCCCEEESSC-S-EEETTCCEEEEECCCT-TCSEEEEEE-EETTE
T ss_pred CCCCEEEecCC-C-ccCCCCCEEEEEEcCC-CCCEEEEEE-CCCcc
Confidence 46789999976 3 3567889999999999 789999998 55443
No 184
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.18 E-value=1.9e-06 Score=50.69 Aligned_cols=34 Identities=24% Similarity=0.491 Sum_probs=26.4
Q ss_pred CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 19 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.......+..+.|.|.+.|.|.|.|+|++ ||..+
T Consensus 126 ~~~~~~~~~~~~~~c~~~g~p~p~i~W~~-~~~~~ 159 (218)
T 4frw_A 126 PALEEGQGLTLAASCTAEGSPAPSVTWDT-EVKGT 159 (218)
T ss_dssp SCEETTCCSEEEEEEEEEEBSCCEEEEEE-SSCCE
T ss_pred eeeeeeeccccceeeeccCCcCceEEEEE-CCccc
Confidence 33445567679999999999999999998 44433
No 185
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.18 E-value=9.7e-07 Score=52.10 Aligned_cols=45 Identities=13% Similarity=0.282 Sum_probs=32.5
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i~ 54 (61)
..+|.|...|... .+.+|+.++|.|.+.|.|.| .|+|++ ||..+.
T Consensus 2 ~~~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~ 47 (176)
T 1f2q_A 2 PQKPKVSLNPPWN-RIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSE 47 (176)
T ss_dssp --CCCCEEESSCS-EEETTCCEEEECCTTCC----CCEEEE-TTEECS
T ss_pred CCCCEEEcCCCCc-ceecCCcEEEEEeCCCCCCcceEEEEE-CCeECC
Confidence 3578888887664 45678889999999999987 699998 776654
No 186
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.17 E-value=1.3e-06 Score=52.88 Aligned_cols=42 Identities=17% Similarity=0.406 Sum_probs=30.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTA 52 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~ 52 (61)
.+|.+...++... +..|..++|.|.|.| .|.| +|+|++ ||..
T Consensus 123 ~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 166 (219)
T 1c1e_H 123 TPPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 166 (219)
T ss_dssp BCCEEEEECCCSS-SCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred CCCeEEEecCccc-cccCCeEEEEEEcccccCCCeEEEEEe-CCcc
Confidence 3465555444432 346778999999999 9999 999998 5654
No 187
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.17 E-value=2.9e-07 Score=57.41 Aligned_cols=33 Identities=21% Similarity=0.493 Sum_probs=27.5
Q ss_pred CCcEEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
+....+.+|..++|.|.|.|+|.|.|+|++++.
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 345556788889999999999999999999544
No 188
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.17 E-value=4.5e-07 Score=60.04 Aligned_cols=42 Identities=29% Similarity=0.587 Sum_probs=32.7
Q ss_pred CcceEEEcC-CCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 9 LGPIFIKEP-PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 9 ~~P~f~~~P-p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
.+|.|...+ +..+.+.+|..++|.|.|.|+|.|.|+|++ ||.
T Consensus 367 ~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~-~g~ 409 (450)
T 1z7z_I 367 YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK-DGT 409 (450)
T ss_dssp EEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEE-TTT
T ss_pred cCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEE-CCc
Confidence 356666553 355567788889999999999999999999 544
No 189
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.16 E-value=3.5e-06 Score=51.12 Aligned_cols=45 Identities=20% Similarity=0.497 Sum_probs=30.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
..+|.+...++....+.++ .++|.|.|.|. |. ++|+|++ ||..+.
T Consensus 107 ~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 153 (207)
T 1l6x_A 107 PREPQVYTLPPSRDELTKN-QVSLTCLVKGFYPSDIAVEWES-NGQPEN 153 (207)
T ss_dssp CBCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CcCCEEEEECCChHHhcCC-cEEEEEEEeCeECCCeEEEEEE-CCeecc
Confidence 4567665554544333444 49999999995 54 3999998 787764
No 190
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.16 E-value=3.8e-06 Score=50.38 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=30.7
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
|.+++. +..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 2 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3r06_A 2 IQMTQS-PSSLPASLGDRVTINCQASQDISNYLNWYQQ 38 (213)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CeeEeC-CCEEEecCCCcEEEEEEeCCCcCceEEEEEE
Confidence 456666 4556678899999999999999999999983
No 191
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.16 E-value=2.7e-06 Score=51.01 Aligned_cols=29 Identities=10% Similarity=0.217 Sum_probs=24.9
Q ss_pred CCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 26 TTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 26 g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+..++|.|.|.|.|.|+|+|++ ||.+|..
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~-~g~~l~~ 138 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQ-GKEHLRS 138 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEE-TTEEEEE
T ss_pred CCcEEEEEEecCCCCcEEEEEE-CCEECCC
Confidence 4459999999999999999998 8877753
No 192
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.16 E-value=1.5e-06 Score=54.83 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=30.4
Q ss_pred CcceEEEcCCCcEE-ecCCCCeEEEEEeccc---CCC-eEEEEeCCCe
Q psy11557 9 LGPIFIKEPPNRID-FSNTTGAQVECTARGS---PNP-EIIWIRSDGT 51 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~-~~~g~~v~L~C~A~G~---P~P-~I~W~~~dg~ 51 (61)
.+|.....|+.... +..|+.++|.|.|.|. |.| .|+|+++++.
T Consensus 14 ~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~ 61 (239)
T 1i1c_A 14 EVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVE 61 (239)
T ss_dssp ---CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCE
T ss_pred cCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCcc
Confidence 44544444566543 5678889999999998 988 9999996644
No 193
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.15 E-value=6.1e-06 Score=49.04 Aligned_cols=41 Identities=10% Similarity=0.274 Sum_probs=30.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.|.+...+.. +..|..+.|.|.+.|.| |.|+|++ ||..+..
T Consensus 112 ~p~i~~~~~~---~~~g~~v~l~C~~~~~p-p~i~W~~-~g~~l~~ 152 (208)
T 3r4d_A 112 QPFLQVTNTT---VKELDSVTLTCLSNDIG-ANIQWLF-NSQSLQL 152 (208)
T ss_dssp CCEEEESCSS---CCTTCCEEEEEECSCTT-CEEEEEE-TTEECCC
T ss_pred CCEEecCCce---EeeCCCEEEEEECCCCC-CceEEEE-CCEeCCC
Confidence 3555555333 45688899999999977 8999998 7777653
No 194
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.15 E-value=3.2e-06 Score=53.43 Aligned_cols=41 Identities=12% Similarity=0.293 Sum_probs=32.6
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
...+.|++.| ..+.+.+|+.++|.|.+.|.|.|.|.|++.+
T Consensus 10 ~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~ 50 (276)
T 3auv_A 10 SGDIQMTQSP-SSLSASVGDRVTITCRASQDVSTAVAWYQQK 50 (276)
T ss_dssp --CCCEEEEC-SEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred ccceeEEeCC-CeEEEcCCCCEEEEeEcCCCCCCcEEEEEEC
Confidence 3456777774 5556778989999999999999999999854
No 195
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.15 E-value=4.6e-06 Score=49.72 Aligned_cols=38 Identities=8% Similarity=0.143 Sum_probs=29.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccCC-----CeEEEEeCCCe
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSPN-----PEIIWIRSDGT 51 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P~-----P~I~W~~~dg~ 51 (61)
+..|+..+.+..|+.+.|.|.+.|.|. |.|+|++.++.
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~ 47 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVEND 47 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCc
Confidence 345667777888999999999999998 99999995444
No 196
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.15 E-value=1.6e-06 Score=52.06 Aligned_cols=44 Identities=25% Similarity=0.499 Sum_probs=32.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~~ 55 (61)
+|.+...++..... .|..++|.|.|.| .|.| .|+|++ ||..+..
T Consensus 112 ~p~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~ 157 (213)
T 3d9a_L 112 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 157 (213)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred CceeEeECCChhhc-CCCcEEEEEEEeeecCCceEEEEEc-CCCcCcc
Confidence 56666655554433 4667999999998 7776 899998 7877653
No 197
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.15 E-value=1.8e-06 Score=53.65 Aligned_cols=44 Identities=23% Similarity=0.451 Sum_probs=30.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.|...+ ....+..|..+.|.|.+.|.|.|.|+|++ +|..+..
T Consensus 98 ~~~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 141 (291)
T 2wim_A 98 KLTFREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTT 141 (291)
T ss_dssp CCBCCSCC-CSEEEETTSCEEECCCCBCSSCCEEEEEC-C----CB
T ss_pred CcceEeCC-CChhhcCCCCEEEEEEEccCCCCEEEEEE-CCccccc
Confidence 34454443 34456788889999999999999999998 5555543
No 198
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.15 E-value=3.3e-06 Score=47.29 Aligned_cols=38 Identities=13% Similarity=0.283 Sum_probs=31.0
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+.+++.| ..+...+|..++|+|.+.|.|.+.|.|++.+
T Consensus 4 ~~v~q~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 41 (109)
T 2q20_A 4 IQMTQSP-SSLSASVGDRVTITCQASQDISNYLNWYQQK 41 (109)
T ss_dssp CCEEEEC-SEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred ccEEeeC-CEEEecCCCcEEEEEeeccCCCCcEEEEEEC
Confidence 4556664 5566788999999999999999999999864
No 199
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.15 E-value=2.3e-06 Score=59.70 Aligned_cols=45 Identities=4% Similarity=0.022 Sum_probs=33.8
Q ss_pred cceEEEcCC-CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPP-NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp-~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.+...|. ..+.+..|..+.|.|.|.|+|.|+|+|++ ||.+|..
T Consensus 324 ~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~g~~l~~ 369 (527)
T 3qs9_E 324 KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPC 369 (527)
T ss_dssp -CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEEC
T ss_pred cCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcC
Confidence 455554443 23556678889999999999999999998 8887743
No 200
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.14 E-value=1.5e-06 Score=58.69 Aligned_cols=46 Identities=20% Similarity=0.528 Sum_probs=38.2
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
..+.+|.|+..| ..+.+.+|+.++|.|.|. |.|+|+|++++|..+.
T Consensus 348 ~~C~~P~i~~~~-~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~ 393 (452)
T 3zyi_A 348 FQCSAPFIMDAP-RDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLS 393 (452)
T ss_dssp CCCCCCCCSBCC-CCEECCTTSCCEECCBCC--TTSEEEEECTTSCEEC
T ss_pred hcccCccccccc-ccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEec
Confidence 456788888774 456678899999999999 9999999998887765
No 201
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.14 E-value=3.2e-06 Score=55.90 Aligned_cols=43 Identities=12% Similarity=0.194 Sum_probs=33.1
Q ss_pred cceEE-EcCCCcEEecCCCCeEEEEEecccCCC---eEEEEeCCCeeec
Q psy11557 10 GPIFI-KEPPNRIDFSNTTGAQVECTARGSPNP---EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~-~~Pp~~~~~~~g~~v~L~C~A~G~P~P---~I~W~~~dg~~i~ 54 (61)
+|.+. ..| ....+.+|+.++|.|.+.|.|+| +|+|++ ||..|.
T Consensus 85 ~P~~~~~~~-~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~ 131 (450)
T 1z7z_I 85 TPERVELAP-LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELK 131 (450)
T ss_dssp CCSEEEECC-CCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEE
T ss_pred CCCcceecC-CCceEeeCCeEEEEEEecCCCCCcCcEEEEee-CCEEee
Confidence 45555 443 43446778889999999999999 999998 777764
No 202
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.14 E-value=3.5e-06 Score=50.81 Aligned_cols=41 Identities=12% Similarity=0.177 Sum_probs=32.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTA 52 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~ 52 (61)
..+|.|...|. . .+.+|+.++|.|.|.+ |.|.++|+| ||..
T Consensus 6 ~~~P~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~ 46 (201)
T 1nkr_A 6 HRKPSLLAHPG-P-LVKSEETVILQCWSDV-MFEHFLLHR-EGMF 46 (201)
T ss_dssp -CCCEEEEESC-S-EEETTCCEEEEEEESS-CCSEEEEEE-ESSS
T ss_pred CCCCeEEEEcC-C-ccCCCCcEEEEEeccC-CCCEEEEEE-CCCc
Confidence 45789998865 3 3567888999999986 889999998 5554
No 203
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.14 E-value=1.4e-06 Score=54.22 Aligned_cols=43 Identities=12% Similarity=0.273 Sum_probs=31.3
Q ss_pred Ccce-EEEcCCCcEEecCCCCeEEEEEeccc-CC-C-eEEEEeCCCeee
Q psy11557 9 LGPI-FIKEPPNRIDFSNTTGAQVECTARGS-PN-P-EIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~-f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P-~I~W~~~dg~~i 53 (61)
.+|. |+.. |..+.+..|..++|.|.|.|. |. | .|+|++ ||..+
T Consensus 11 ~~P~v~~~~-p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~-~g~~~ 57 (231)
T 2w59_A 11 SPIQLYAIP-PSPGELYISLDAKLRCLVVNLPSDSSLSVTWTR-EKSGN 57 (231)
T ss_dssp -CCEEEEEC-CCHHHHHTSCCCEEEEEEEEESCCTTCEEEEEC-SSSSC
T ss_pred CCCEEEEeC-cChhhcccCCceEEEEEEeCccCCCCeEEEEEc-CCeec
Confidence 3455 4455 555556678889999999995 75 6 999996 77765
No 204
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.14 E-value=1.8e-06 Score=51.85 Aligned_cols=45 Identities=22% Similarity=0.496 Sum_probs=32.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~~ 55 (61)
.+|.+...++..... .+..++|.|.|.| .|.| +|+|++ ||.++..
T Consensus 120 ~~P~~~~~~~~~~~~-~~~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 166 (218)
T 3s96_B 120 STPTLTVFPPSSEEL-KENKATLVCLISNFSPSGVTVAWKA-NGTPITQ 166 (218)
T ss_dssp BCCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-TTEEC--
T ss_pred CCceEEeeCCCcccc-cCCcEEEEEEECcccCCCeEEEEEE-CCEECcC
Confidence 566666655554433 3467999999999 6888 999998 8887743
No 205
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.13 E-value=5.8e-06 Score=50.81 Aligned_cols=38 Identities=18% Similarity=0.434 Sum_probs=30.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
+|.|.+. +..+.+.+|..++|.|.+.|.|.|.|+|++.
T Consensus 135 ~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 135 ETTLTQS-PATLSLSPGERATLSCRASQSVRSNLAWYQQ 172 (247)
T ss_dssp CCCEEEE-CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred ceEEEcc-CCEEEecCCCcEEEEEEeCCCccceEEEEEE
Confidence 4556666 4455567888999999999999999999983
No 206
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.13 E-value=1.7e-06 Score=52.28 Aligned_cols=44 Identities=20% Similarity=0.391 Sum_probs=31.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.+...++..... .|..++|.|.|.| .|.| +|+|++ ||..+.
T Consensus 113 ~~P~v~~~~~~~~~~-~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~ 158 (216)
T 2xzc_L 113 AAPSVFIFPPSDEQL-KSGTASVVCLLNNFYPREAKVQWKV-DNALQS 158 (216)
T ss_dssp BCCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCceEEeCCChhhc-cCCcEEEEEEEEeEcCCceEEEEEE-CCeecC
Confidence 456666654544333 3557999999999 5665 899998 777764
No 207
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.13 E-value=4.4e-06 Score=50.23 Aligned_cols=31 Identities=19% Similarity=0.434 Sum_probs=27.2
Q ss_pred CCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
|..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 37 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQ 37 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEE
Confidence 4556678899999999999999999999984
No 208
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.13 E-value=3.1e-06 Score=53.99 Aligned_cols=37 Identities=22% Similarity=0.425 Sum_probs=30.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~d 49 (61)
.|++. +..+.+.+|+.++|.|.+.|. |.|.|+|++++
T Consensus 5 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~ 42 (327)
T 2wng_A 5 QVIQP-DKSVSVAAGESAILHCTVTSLIPVGPIQWFRGA 42 (327)
T ss_dssp CEECC-CSEEEEETTSCEEECCEESCCCSCCCEEEEESC
T ss_pred EEEcC-CCceEEecCCcEEEEEEccCcCCCceEEEEECC
Confidence 45554 666677889999999999998 99999999944
No 209
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.13 E-value=3.1e-06 Score=51.64 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=29.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
.|++.| ..+.+.+|..++|.|.+.|.|.|.|+|++.+
T Consensus 129 ~v~~~p-~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 129 QVRQSP-QSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp CCEEEC-SEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred eEEccC-ceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 566664 4455678889999999999999999999853
No 210
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.13 E-value=2.9e-06 Score=56.71 Aligned_cols=46 Identities=17% Similarity=0.432 Sum_probs=34.4
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
...+|.+...++....+.+|. ++|.|.|.|.|+| .|+|++ ||..+.
T Consensus 352 ~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k-~g~~l~ 399 (457)
T 1hzh_H 352 QPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWES-NGQPEN 399 (457)
T ss_dssp CCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEE-CCEECc
Confidence 345787777766654455666 9999999998655 999998 788774
No 211
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.12 E-value=2e-06 Score=51.31 Aligned_cols=29 Identities=21% Similarity=0.716 Sum_probs=24.5
Q ss_pred CCCCeEEEEEec-ccCCCeEEEEeCCCeeec
Q psy11557 25 NTTGAQVECTAR-GSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 25 ~g~~v~L~C~A~-G~P~P~I~W~~~dg~~i~ 54 (61)
.|..++|.|.|. |+|.|+|+|++ ||..+.
T Consensus 120 ~g~~~~l~C~~~~g~P~p~i~W~k-~g~~l~ 149 (201)
T 1dr9_A 120 TSNIRRIICSTSGGFPEPHLSWLE-NGEELN 149 (201)
T ss_dssp STTEEEEEEEEEEESSCEEEEEEE-SSCEEC
T ss_pred CCCeEEEEEecCCccCCCEEEEEE-CCEECc
Confidence 455689999995 99999999998 677765
No 212
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.12 E-value=3.5e-06 Score=51.25 Aligned_cols=45 Identities=16% Similarity=0.375 Sum_probs=32.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
..+|.+...++.... ..|..++|.|.|.|. |+| +|+|++ ||..+.
T Consensus 107 ~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 153 (207)
T 2vol_A 107 PKAPQVYTLPPPKEQ-MAKDKVSLTCMITDFFPEDITVEWES-NGQPAE 153 (207)
T ss_dssp CBCCEEEEECCCTGG-GSSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CcCCeEEEeCCCHHH-hcCCceEEEEEEeeEECCCCEEEEEE-CCEecc
Confidence 456777666555432 246779999999995 553 999998 787764
No 213
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.12 E-value=4.8e-06 Score=51.27 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=30.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
..+++. |..+.+.+|+.++|.|.+.|.|.|.|.|++.
T Consensus 5 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~ 41 (250)
T 3esu_F 5 IVLIQS-TSSLSASLGDRVTISCRASQDIRNYLNWYQQ 41 (250)
T ss_dssp CCEECS-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred eeEEec-CCEEEeeCCCcEEEEEEecccCCceEEEEEE
Confidence 345555 5666678899999999999999999999984
No 214
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.12 E-value=2.9e-06 Score=51.01 Aligned_cols=44 Identities=27% Similarity=0.366 Sum_probs=32.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
.+|.+...++.... ..|..++|.|.|.|.|+| .|+|++ ||..+.
T Consensus 114 ~~P~v~~~~~~~~~-~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~ 159 (212)
T 1q0x_L 114 SSPTVTLFPPSSEE-LSTAKATLVCTITDFYPGVVTVDWKV-DGTPVT 159 (212)
T ss_dssp BCCEEEEECCCHHH-HTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCCeeEEeCCCHHH-ccCCcEEEEEEEEEEeCCCeEEEEEE-CCEeCC
Confidence 46777666555433 346679999999996544 899998 787764
No 215
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.11 E-value=1.4e-06 Score=53.53 Aligned_cols=45 Identities=29% Similarity=0.522 Sum_probs=31.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.+...++....+..|..++|.|.|.| .|.| +|+|++ ||..+.
T Consensus 120 ~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~l~ 166 (240)
T 3q5y_A 120 TPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV-NGKEVH 166 (240)
T ss_dssp BCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred CCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEE-CCEECc
Confidence 44555444444433445677999999999 7777 799998 888774
No 216
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.11 E-value=3.5e-06 Score=50.51 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=33.3
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
..+|.+...++.... ..|..++|.|.|.|.|+| +|+|++ ||..+.
T Consensus 110 ~~~p~v~~~~~~~~~-~~~~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 156 (213)
T 3r06_A 110 DAKPTVSIFPPSSEQ-LGTGSATLVCFVNNFYPKDINVKWKV-DGSEKR 156 (213)
T ss_dssp CBCCEEEEECCCHHH-HTTTEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred CCCceeeeeCCCcee-cCCCCcEEEEEEeeecCCceEEEEEE-CCcccC
Confidence 456777776665543 345569999999998753 999998 787775
No 217
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.11 E-value=4.5e-06 Score=56.42 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=35.4
Q ss_pred CcceEEEcCC--CcEEecCCCCeEEEEEecccCCCe-EEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPP--NRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp--~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~i~~ 55 (61)
.+|.+...|. ..+.+..|..++|.|.+.|+|.|. |+|++ ||..+..
T Consensus 309 ~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k-~g~~~~~ 357 (524)
T 2ec8_A 309 DKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY-MNRTFTD 357 (524)
T ss_dssp SSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES-SSCBCSS
T ss_pred ccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE-CCeeccC
Confidence 3466655543 356677888999999999999999 99998 6766644
No 218
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.10 E-value=3e-06 Score=54.03 Aligned_cols=43 Identities=14% Similarity=0.331 Sum_probs=32.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCC-C-eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPN-P-EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~-P-~I~W~~~dg~~i~ 54 (61)
..+|.|...+.. +.+|..++|.|.|.|.|+ | +|+|++ ||..+.
T Consensus 220 ~~~P~i~~~~~~---~~~G~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 264 (327)
T 2wng_A 220 RVPPTLEVTQQP---VRAENQVNVTCQVRKFYPQRLQLTWLE-NGNVSR 264 (327)
T ss_dssp CBCCEEEEEEEC---CSSTTCCEEEEEEEEEBSSCEEEEEEE-TTEEEE
T ss_pred CCCCEEEEecCC---cCCCCcEEEEEEEccccCCCcEEEEEE-CCeEcc
Confidence 456777766444 457888999999999654 4 899998 787764
No 219
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.10 E-value=1e-05 Score=57.29 Aligned_cols=46 Identities=24% Similarity=0.502 Sum_probs=37.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+|.|...+... .+..|..++|.|.+.|+|.|.|+|++ ||..+..
T Consensus 427 ~~~p~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~v~W~~-~g~~l~~ 472 (816)
T 3dmk_A 427 FDPPVIRQAFQEE-TMEPGPSVFLKCVAGGNPTPEISWEL-DGKKIAN 472 (816)
T ss_dssp SCCCEEEEECCCE-EECSSSCEEEEEEEECSSCCEEEEEE-TTEECCS
T ss_pred cCCCceEecCcce-EEcCCCCEEEEEEEecCCCCEEEEEE-CCEECCC
Confidence 4578888775544 56778889999999999999999998 7776643
No 220
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.10 E-value=2.3e-06 Score=50.57 Aligned_cols=33 Identities=27% Similarity=0.581 Sum_probs=27.4
Q ss_pred EecCCCCeEEEEEe-cccCCCeEEEEeCCCeeecC
Q psy11557 22 DFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 22 ~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+..|..++|.|.| .|+|.|.|+|++ ||..+..
T Consensus 118 ~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~~~~ 151 (209)
T 1nbq_A 118 SATIGNRAVLTCSEQDGSPPSEYTWFK-DGIVMPT 151 (209)
T ss_dssp EEETTSCEEECCCCCSCBSCCEEEEEE-TTCCCCS
T ss_pred ceecCCEEEEEEeCCCCCCCceeEEEE-CCeeCCC
Confidence 35678889999998 999999999998 6666654
No 221
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.10 E-value=4.4e-06 Score=56.45 Aligned_cols=45 Identities=18% Similarity=0.440 Sum_probs=33.7
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
..+|.+...++....+.++. ++|.|.|.|.|+| .|+|++ ||.++.
T Consensus 423 ~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k-~g~~~~ 469 (523)
T 2rcj_C 423 PREPQVYTLPPSREEMTKNQ-VSLTCLVKGFYPSDIAVEWES-NGQPEN 469 (523)
T ss_pred CCCCEEEEeCCChHHccCCc-eEEEEEEEeeECCCCEEEEEE-CCEECC
Confidence 45677666655544444554 9999999999887 999998 788775
No 222
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.10 E-value=1.6e-06 Score=53.33 Aligned_cols=45 Identities=29% Similarity=0.502 Sum_probs=30.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~~ 55 (61)
.|.+...++....+..|..++|.|.|.| .|.| .|+|++ ||..+..
T Consensus 123 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~-~g~~l~~ 169 (245)
T 4ei6_B 123 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEE-CCEECCC
Confidence 4544433334333445777999999999 5556 899998 8888753
No 223
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.10 E-value=1.1e-05 Score=48.23 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=33.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+|.|...|.. .+..|+.++|.|.|.|. .+.++|++ ||..+
T Consensus 2 l~~P~i~~~p~~--~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~ 43 (188)
T 1oll_A 2 LPKPFIWAEPHF--MVPKEKQVTICCQGNYG-AVEYQLHF-EGSLF 43 (188)
T ss_dssp CCCCEEEEESCS--EEETTCCEEEEEECCTT-CCEEEEEE-TTEEE
T ss_pred CCCCEEEeecCC--cCCCCCCEEEEEecCCC-CCEEEEEE-CCCcc
Confidence 357899999765 35678889999999984 58999998 66654
No 224
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.10 E-value=3.3e-06 Score=54.09 Aligned_cols=45 Identities=20% Similarity=0.431 Sum_probs=33.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC---eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP---EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P---~I~W~~~dg~~i~ 54 (61)
.|.+...++..+.+..|..++|.|.|.|. |.| .|+|++++|..+.
T Consensus 112 ~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~ 160 (323)
T 2wqr_A 112 GVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVN 160 (323)
T ss_dssp GCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCC
T ss_pred CCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccc
Confidence 45443444555556678889999999996 577 9999997777654
No 225
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.10 E-value=1e-06 Score=53.02 Aligned_cols=44 Identities=20% Similarity=0.447 Sum_probs=31.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
.+|.+...++.... ..|..++|.|.|.|. |+ |.|+|++ ||..+.
T Consensus 112 ~~p~v~~~~~~~~~-~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~ 157 (212)
T 1nfd_E 112 SSPKVTVFPPSPEE-LRTNKATLVCLVNDFYPGSATVTWKA-NGATIN 157 (212)
T ss_dssp BCCEEECCCCCHHH-HHTTEECCCEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCCEEEeeCCchHh-ccCCceEEEEEEEeeECCccEEEEEE-CCeEcC
Confidence 45666655444432 346679999999998 55 8999998 787764
No 226
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.10 E-value=3.8e-06 Score=58.07 Aligned_cols=35 Identities=17% Similarity=0.416 Sum_probs=29.4
Q ss_pred CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 19 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
....+..|..++|.|.|.|+|.|.|+|++ ||..+.
T Consensus 389 ~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~~~ 423 (642)
T 1e07_A 389 SYTYYRPGVNLSLSCHAASNPPAQYSWLI-DGNIQQ 423 (642)
T ss_pred CceEecCCCcEEEEEEcCccCCCeEEEEE-CCEEcC
Confidence 34456778889999999999999999998 787764
No 227
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.09 E-value=4.7e-06 Score=51.19 Aligned_cols=31 Identities=16% Similarity=0.461 Sum_probs=26.3
Q ss_pred cCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 24 SNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 24 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
..|..++|.|.|.|. |.| +|+|++.||..+.
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~ 171 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKNNSDIS 171 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCS
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccCCCccc
Confidence 467779999999998 888 9999997887764
No 228
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.08 E-value=3.9e-06 Score=51.05 Aligned_cols=37 Identities=11% Similarity=0.403 Sum_probs=31.9
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecc---cCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARG---SPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G---~P~P~I~W~~~d 49 (61)
.+..|+..+.+.+|+.++|.|.+.| .|.|.|+|++.+
T Consensus 4 ~v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~ 43 (250)
T 2fbo_J 4 TVRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGA 43 (250)
T ss_dssp EEECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEE
T ss_pred EEEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCC
Confidence 4566677788889999999999999 999999999954
No 229
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.08 E-value=2.9e-06 Score=50.22 Aligned_cols=32 Identities=28% Similarity=0.603 Sum_probs=26.7
Q ss_pred EecCCCCeEEEEE-ecccCCCeEEEEeCCCe-eec
Q psy11557 22 DFSNTTGAQVECT-ARGSPNPEIIWIRSDGT-AVG 54 (61)
Q Consensus 22 ~~~~g~~v~L~C~-A~G~P~P~I~W~~~dg~-~i~ 54 (61)
.+..|..++|.|. +.|+|.|.|+|++ ||. .+.
T Consensus 115 ~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~ 148 (212)
T 1f97_A 115 SVTIGNRAVLTCSEHDGSPPSEYSWFK-DGISMLT 148 (212)
T ss_dssp EEETTSCEEEEEECSCCBSCCEEEEEE-TTEESBC
T ss_pred ccCCCCeEEEEEEcccCcCCCEEEEEe-CCccccc
Confidence 3456888999999 8999999999998 666 654
No 230
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.08 E-value=5.1e-06 Score=56.27 Aligned_cols=39 Identities=8% Similarity=0.204 Sum_probs=28.5
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
+.++.+|. .+.+.+|..+.|.|.+.|.|.|.|+|+++++
T Consensus 49 ~~~~~~~~-~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~ 87 (423)
T 3qs7_E 49 SGTVYEAA-AVEVDVSASITLQVLVDAPGNISCLWVFKHS 87 (423)
T ss_dssp -------C-EEEECSSCCEEEEEECSCCSSCEEEEEETTE
T ss_pred Ccceeccc-cEEEecCCcEEEEEEEEcCCCCeEEEEECCC
Confidence 45667754 7788899999999999999999999998543
No 231
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.08 E-value=1.3e-06 Score=54.61 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=31.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~~ 55 (61)
+|.+...++....+..|..++|.|.|.|.|+| +|+|++ ||..+..
T Consensus 145 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~-~g~~l~~ 191 (268)
T 3pl6_D 145 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 191 (268)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-SSSEECT
T ss_pred CCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE-CCEECCC
Confidence 45444333443334457789999999997765 899998 7887743
No 232
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.08 E-value=1.4e-06 Score=54.65 Aligned_cols=45 Identities=29% Similarity=0.502 Sum_probs=30.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~~ 55 (61)
+|.+...++....+..|..++|.|.|.| .|.| .|+|++ ||..+..
T Consensus 148 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 194 (270)
T 3qib_D 148 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 194 (270)
T ss_dssp CCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEE-CCEECCC
Confidence 4443333333323334677999999999 7878 899998 8888753
No 233
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.08 E-value=6.5e-06 Score=47.97 Aligned_cols=37 Identities=5% Similarity=0.110 Sum_probs=29.4
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
.|... +..+.+..|..++|.|.+.|.|.|.|.|++.+
T Consensus 40 ~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~ 76 (145)
T 1z9m_A 40 DSQPW-TSDETVVAGGTVVLKCQVKDHEDSSLQWSNPA 76 (145)
T ss_dssp TTCCB-CCCEEEETTSCEEEEEECSCCTTCCEEEECTT
T ss_pred ceecC-CceEEEEcCCCEEEEEEEcCCCCcEEEEECCC
Confidence 34444 45566778889999999999999999999643
No 234
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.07 E-value=9.8e-06 Score=47.34 Aligned_cols=43 Identities=30% Similarity=0.516 Sum_probs=31.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC-Ceeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD-GTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d-g~~i~ 54 (61)
+|.+... +.. .+..|..+.|.|.+.|+|.|.|+|++++ |..+.
T Consensus 95 ~p~~~~~-~~~-~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~ 138 (192)
T 2va4_A 95 QPHIIQL-KNE-TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFT 138 (192)
T ss_dssp EEEEEEE-CCE-EECTTSEEEEEEEEEEESCCEEEEEETTTTEEEC
T ss_pred cCccccc-Ccc-eEEeCCeEEEEEEecCCCCCcEEEEeCCCCceee
Confidence 4555554 333 3456878999999999999999999952 55543
No 235
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.07 E-value=3.9e-06 Score=51.07 Aligned_cols=40 Identities=25% Similarity=0.471 Sum_probs=28.7
Q ss_pred eEEEcCCCcEE-ecCCCCeEEEEEecccC----CCeEEEEeCCCeee
Q psy11557 12 IFIKEPPNRID-FSNTTGAQVECTARGSP----NPEIIWIRSDGTAV 53 (61)
Q Consensus 12 ~f~~~Pp~~~~-~~~g~~v~L~C~A~G~P----~P~I~W~~~dg~~i 53 (61)
+|+.. |.... +..|+.++|.|.|.|.| .+.|+|++++ ..+
T Consensus 4 v~~~~-P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~ 48 (207)
T 2vol_A 4 VFIFP-PKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDD-VEV 48 (207)
T ss_dssp EEEEC-CCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETT-EEE
T ss_pred EEEeC-cChhhhhccCCceEEEEEEeCcccCCCceEEEEEECC-ccc
Confidence 45554 55322 56788999999999995 2499999954 444
No 236
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.07 E-value=6.5e-06 Score=51.01 Aligned_cols=37 Identities=11% Similarity=0.288 Sum_probs=30.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
.+++.| ..+.+.+|+.++|.|.+.|.|.|.|.|++.+
T Consensus 3 ~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~ 39 (242)
T 2znx_A 3 VLTQSP-ATLSVTPGNSVSLSCRASQSIGNNLHXYQQK 39 (242)
T ss_dssp CEEEEC-SEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred cEEEcC-CeEEEcCCCcEEEEEEeCCCCCceEEEEEeC
Confidence 466664 4556788999999999999999999999853
No 237
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.07 E-value=2.9e-06 Score=51.56 Aligned_cols=43 Identities=16% Similarity=0.396 Sum_probs=30.4
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i 53 (61)
..|.+...++... +..|..++|.|.|.|. |.| +|+|++ ||..+
T Consensus 126 ~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~~ 170 (222)
T 1q9r_B 126 TPPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLSS 170 (222)
T ss_dssp BCCEEEEECCCSC-CCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBCT
T ss_pred CCCeEEEcccccc-ccCCCcEEEEEEEccEECCCCEEEEec-CCeEc
Confidence 3455554444432 3467789999999996 999 999998 66543
No 238
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.07 E-value=4.9e-06 Score=49.09 Aligned_cols=33 Identities=6% Similarity=0.134 Sum_probs=26.5
Q ss_pred CCCcEEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
++.. .+..|..++|.|.+.|.|.|.|+|+++++
T Consensus 104 ~~~~-~v~~g~~~~l~C~~~~~p~~~v~W~~~~~ 136 (184)
T 2ny1_B 104 NSDT-HLLQGQSLTLTLESPPGSSPSVQCRSPRG 136 (184)
T ss_dssp SSCS-EEETTCCEEEEEECCTTCCCEEEEECTTS
T ss_pred CCCc-eeecCCCEEEEEEcCCCCCCEEEEEeCCC
Confidence 4443 35678889999999999999999998544
No 239
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.07 E-value=5.7e-06 Score=46.24 Aligned_cols=36 Identities=14% Similarity=0.410 Sum_probs=29.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+...+|..++|.|.+.+.|.+.|.|++.+
T Consensus 4 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (108)
T 1qfw_M 4 LTQS-PKSMSMSVGERVTLSCKASETVDSFVSWYQQK 39 (108)
T ss_dssp EEEE-CSCEECCTTCCEEEEEEESSCCCSCEEEEEEC
T ss_pred EEEe-CCeEEEcCCCCEEEEeeeCCCCCcEEEEEEEC
Confidence 4455 45556788999999999999999999999853
No 240
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.07 E-value=1.4e-06 Score=55.76 Aligned_cols=45 Identities=18% Similarity=0.327 Sum_probs=22.6
Q ss_pred cceEEEcCCCcE-EecCCCCeEEEEEec----ccCCCeEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRI-DFSNTTGAQVECTAR----GSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~-~~~~g~~v~L~C~A~----G~P~P~I~W~~~dg~~i~~ 55 (61)
+|.|+..+...+ .+..|..++|.|.|. |+|.|.|+|++ ||..+..
T Consensus 224 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~-~g~~l~~ 273 (349)
T 4dep_C 224 PPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTI-DGKKPDD 273 (349)
T ss_dssp SCEEC----------------CCCEEEEECCCTTCCCEEEEES-SCC----
T ss_pred CCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEE-CCEEccc
Confidence 567665544332 566788899999999 78999999998 7776654
No 241
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.06 E-value=5.5e-06 Score=46.24 Aligned_cols=36 Identities=8% Similarity=0.410 Sum_probs=29.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+.+.+|..++|.|.+.|.|.+.|.|++.+
T Consensus 4 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (107)
T 1i8k_A 4 LTQS-PASLSVATGEKVTIRCMTSTDIDDDMNWYQQK 39 (107)
T ss_dssp EEEE-CSEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eEeC-CCeEEecCCCCEEEEEEECCCCCCcEEEEEEC
Confidence 4455 45566788999999999999999999999853
No 242
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.06 E-value=6.1e-06 Score=49.50 Aligned_cols=36 Identities=19% Similarity=0.403 Sum_probs=29.9
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 48 (61)
|.+++. + .+.+..|+.++|.|.+.|. |.|.|+|++.
T Consensus 2 ~~v~~~-p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 38 (218)
T 3s96_B 2 LVLTQS-S-SASFSLGASAKLTCTLNSQHSTYTIEWYQQ 38 (218)
T ss_dssp CSEECC-S-EEEEETTSCEEEEEEECGGGTTCCEEEEEE
T ss_pred CeEEeC-C-cEEECCCCcEEEEEECCCCCCCcEEEEEEE
Confidence 445555 4 6677889999999999999 9999999983
No 243
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.05 E-value=1.8e-06 Score=53.93 Aligned_cols=46 Identities=28% Similarity=0.505 Sum_probs=31.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeecC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~~ 55 (61)
.+|.+...++....+..|..++|.|.|.| .|.| +|+|++ ||..+..
T Consensus 122 ~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~l~~ 169 (253)
T 3to4_D 122 FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 169 (253)
T ss_dssp BCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEE-CCEECCC
Confidence 34444443333333334567999999999 7778 899998 8888753
No 244
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.05 E-value=7.8e-06 Score=49.47 Aligned_cols=39 Identities=13% Similarity=0.319 Sum_probs=31.1
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
..+.+++.| ..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 23 ~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 61 (237)
T 3sob_L 23 ADIQMTQSP-SSLSASVGDRVTITCRASQDVSTAVAWYQQ 61 (237)
T ss_dssp -CCCEEEEC-SEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ccceEEeCC-CeEEEeCCCcEEEEEecCCCCCceEEEEEE
Confidence 345666664 455677888999999999999999999984
No 245
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.05 E-value=7.7e-06 Score=51.19 Aligned_cols=35 Identities=14% Similarity=0.376 Sum_probs=28.8
Q ss_pred cEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 20 RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 20 ~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
.+.+..|..+.|.|.+.|.|.|.|+|++ ||..+..
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~ 147 (305)
T 2nzi_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDN 147 (305)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEE-SSSBCCS
T ss_pred cEEecCCCEEEEEEEECCCCCCEEEEEE-CCEECCC
Confidence 4455678889999999999999999998 6666543
No 246
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.05 E-value=1.2e-06 Score=55.55 Aligned_cols=44 Identities=30% Similarity=0.497 Sum_probs=29.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
+|.+...++....+..|..++|.|.|.|. |. |+|+|++ ||..+.
T Consensus 149 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~ 194 (279)
T 2wbj_D 149 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 194 (279)
T ss_dssp CCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEE-TTEECC
T ss_pred CCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEE-CCEECC
Confidence 45444333333223356779999999998 54 7999998 787764
No 247
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.05 E-value=9.6e-06 Score=51.79 Aligned_cols=36 Identities=19% Similarity=0.455 Sum_probs=29.1
Q ss_pred EEEcCCCc-EEecCCCCeEEEEEecccCCC--eEEEEeCC
Q psy11557 13 FIKEPPNR-IDFSNTTGAQVECTARGSPNP--EIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~-~~~~~g~~v~L~C~A~G~P~P--~I~W~~~d 49 (61)
|..+|+.. +.+..|++++|+|.| |.|.| .|+|++.+
T Consensus 8 ~~V~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~ 46 (210)
T 1gsm_A 8 LQVEPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLD 46 (210)
T ss_dssp EEEESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESST
T ss_pred EEEeCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeecc
Confidence 44446655 667788899999999 99999 99999865
No 248
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.04 E-value=2e-06 Score=52.41 Aligned_cols=41 Identities=10% Similarity=0.324 Sum_probs=25.7
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
...+.+++.|.. +.+..|+.++|.|.+.|.|.|.|+|++.+
T Consensus 21 ~~~~~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~~~~ 61 (233)
T 3bqu_C 21 GAETTVTQSPAS-LSMSIGEKVTIRCITSTDIDDDMNWYQQK 61 (233)
T ss_dssp --CCCEEEECSB-C-------CCEEEEEEEEESSCEEEEEEC
T ss_pred ccceeEEEcCCe-EEEecCCCEEEEEecCCcCCCeEEEEEEC
Confidence 345566666544 45677888999999999999999999854
No 249
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.04 E-value=3.1e-06 Score=50.48 Aligned_cols=28 Identities=32% Similarity=0.571 Sum_probs=23.9
Q ss_pred ecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 23 FSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 23 ~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
..+|..+.|.|.|.|.|.|.|+|+++++
T Consensus 115 ~~~g~~v~l~C~~~g~P~p~v~W~~~~~ 142 (202)
T 3bp6_B 115 VPGTGEVQLTCQARGYPLAEVSWQNVSV 142 (202)
T ss_dssp CTTTCCEEEEEEEEEBSCCEEEETTCCS
T ss_pred cCCCCeEEEEEEccccCCceEEEEeCCC
Confidence 3567789999999999999999998433
No 250
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.04 E-value=4.4e-06 Score=49.06 Aligned_cols=33 Identities=21% Similarity=0.497 Sum_probs=27.3
Q ss_pred CCCcEEecCCCCeEEEEEecccCCCe---EEEEeCC
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSPNPE---IIWIRSD 49 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P~P~---I~W~~~d 49 (61)
.+..+.+..|+.++|.|.+.|.|.|. |+|++.+
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~ 40 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVD 40 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEEC
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECC
Confidence 35667778899999999999999875 8999843
No 251
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.04 E-value=5.3e-06 Score=50.29 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=30.3
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDG 50 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg 50 (61)
..|.+...++... ..+|..++|.|.|.|. |.| +|+|+++++
T Consensus 124 ~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 124 TAPSVYPLVPGCS-DTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp BCCEEEEECCCSC-CSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCCeEEEcccccc-cCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 4566555544433 3567789999999998 999 999998544
No 252
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.04 E-value=8e-06 Score=50.63 Aligned_cols=42 Identities=10% Similarity=0.176 Sum_probs=32.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.+|.|...| +. .+.+|+.++|.|.+.+.|.|.++|++ ||..+
T Consensus 105 ~~P~i~~~p-~~-~v~~G~~v~L~C~~~~~~~~~~~W~k-~g~~~ 146 (218)
T 1uct_A 105 GKPFLSADR-GL-VLMPGENISLTCSSAHIPFDRFSLAK-EGELS 146 (218)
T ss_dssp CCCEEEESS-CS-EECTTCCCEEEEECSSSCCSEEEEEE-TTCSS
T ss_pred cCCEEEeCC-CC-ccCCCCCEEEEEeCCCCCCCEEEEEE-CCCcc
Confidence 467777765 33 35678889999988899999999998 66544
No 253
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.04 E-value=3.6e-06 Score=51.25 Aligned_cols=34 Identities=26% Similarity=0.657 Sum_probs=27.5
Q ss_pred EEecCCCCeEEEEEecc-cCCCeEEEEeCCCeeec
Q psy11557 21 IDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~~i~ 54 (61)
....+|..+.|.|.+.| .|.|+|+|++++|..+.
T Consensus 128 ~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~ 162 (226)
T 4f80_A 128 VKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIP 162 (226)
T ss_dssp EEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred eeeccCCceeeEEEeccCCCCCEEEEEECCceEcC
Confidence 34456778999999999 59999999997777653
No 254
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.03 E-value=3.7e-06 Score=55.64 Aligned_cols=35 Identities=9% Similarity=0.281 Sum_probs=29.1
Q ss_pred CCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
+.++.+.+|..++|.|.|.| |.|.|+|+++++..+
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~ 287 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQV 287 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBC
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeE
Confidence 44556778989999999999 999999999766544
No 255
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.03 E-value=7.6e-06 Score=46.96 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=29.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+.+.+|..++|.|.+.|.|.+.|.|++.+
T Consensus 4 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (120)
T 1mqk_L 4 LTQT-PVSLSASVGETVTITCRASENIYSYLAWYQQK 39 (120)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eEec-CCeEEEcCCCcEEEEEEeCCCCCceEEEEEEC
Confidence 4455 45566788999999999999999999999853
No 256
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.03 E-value=6.8e-06 Score=54.61 Aligned_cols=46 Identities=15% Similarity=0.378 Sum_probs=33.1
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
...+|.+...++....+.+|. ++|.|.|.| .|.| +|+|++ ||..+.
T Consensus 343 ~~~~P~v~~~~~~~~~~~~~~-~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 390 (444)
T 1igt_B 343 SVRAPQVYVLPPPEEEMTKKQ-VTLTCMVTDFMPEDIYVEWTN-NGKTEL 390 (444)
T ss_dssp CCBCCEEEEECCCGGGTTSSE-EEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCCCCEEEEeCCChHHccCCe-EEEEEEEEeeeCCCCEEEEEE-CCEEcc
Confidence 446777776655543344554 999999999 5666 999998 777663
No 257
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.03 E-value=2.4e-06 Score=53.40 Aligned_cols=44 Identities=30% Similarity=0.502 Sum_probs=30.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
+|.+...++....+..|..++|.|.|.|. |.| +|+|++ ||..+.
T Consensus 122 ~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~l~ 167 (252)
T 1oga_E 122 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 167 (252)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEEC
T ss_pred CCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEE-CCEECC
Confidence 45444433333333346779999999996 764 999998 887764
No 258
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.02 E-value=3.7e-06 Score=50.69 Aligned_cols=42 Identities=17% Similarity=0.413 Sum_probs=30.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
.+|.+...++... ...|..++|.|.|.|. |.| +|+|++ ||..
T Consensus 117 ~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~~ 160 (210)
T 3d9a_H 117 TPPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 160 (210)
T ss_dssp BCCEEEEECCTTS-CCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred CCCEEEEecCCcc-cccCCcEEEEEEEeeEecCCcEEEEee-CCcc
Confidence 4566655544433 3567789999999998 999 999998 5553
No 259
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.02 E-value=6.2e-06 Score=48.40 Aligned_cols=32 Identities=13% Similarity=0.329 Sum_probs=27.4
Q ss_pred ecCCCCeEEEEEecccCCC--eEEEEeCCCeeecC
Q psy11557 23 FSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 55 (61)
Q Consensus 23 ~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~~ 55 (61)
+.+|+.+.|.|.+.|.|.| .|+|++ ||..+..
T Consensus 10 v~~G~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~ 43 (184)
T 3b5h_A 10 EDLGSKILLTCSLNDSATEVTGHRWLK-GGVVLKE 43 (184)
T ss_dssp EEETTEEEEEEEEESCSSCCCEEEEES-SSEEEEC
T ss_pred EecCCCEEEEEECCCCCCCceEEEEEe-CCEEeec
Confidence 4568889999999999999 999998 8887754
No 260
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.02 E-value=1.1e-05 Score=49.98 Aligned_cols=30 Identities=17% Similarity=0.487 Sum_probs=24.3
Q ss_pred CC-CCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 25 NT-TGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 25 ~g-~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
.| ..++|.|.|.|. |.| .|+|++.||..+.
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~ 171 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDIS 171 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEEC
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCcee
Confidence 45 779999999997 888 9999987787764
No 261
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.01 E-value=9.5e-06 Score=50.31 Aligned_cols=40 Identities=13% Similarity=0.254 Sum_probs=31.4
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccC-----CCeEEEEeCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 49 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 49 (61)
..+.+++.| ..+.+..|+.++|.|.+.|.| .|.|+|++.+
T Consensus 33 ~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 77 (252)
T 3bkj_L 33 SDVLMTQTP-LSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQR 77 (252)
T ss_dssp -CCCEEEEC-SEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred cccEEEeCC-ceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEEC
Confidence 345666664 556677898999999999999 7999999854
No 262
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.01 E-value=1.1e-05 Score=50.12 Aligned_cols=38 Identities=13% Similarity=0.344 Sum_probs=31.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
+|.+++.| ..+.+.+|..++|.|.+.|.|.|.|+|++.
T Consensus 138 ~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 175 (256)
T 3umt_A 138 DIQLTQSP-SSLSASLGERVSITCRASQDIGSNLNWLQQ 175 (256)
T ss_dssp CCCEEEEC-SEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ccEEEcCC-CeEEEECCCCEEEEEEEecCCCcEEEEEEE
Confidence 66777774 445677898999999999999999999984
No 263
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.00 E-value=9.1e-06 Score=54.90 Aligned_cols=44 Identities=20% Similarity=0.304 Sum_probs=33.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
.+|.|...|.... ...|..++|.|.|.|.|+| +|+|++ ||..+.
T Consensus 113 ~~P~~~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 158 (523)
T 2rcj_C 113 ANPTVTLFPPSSE-ELQANKATLVCLISDFYPGAVTVAWKA-DGSPVK 158 (523)
T ss_pred cCCeEEecCCccc-ccCCCceEEEEEeccccCCceEEEEec-CCCCCC
Confidence 5677777765543 4457789999999999875 999998 776653
No 264
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.00 E-value=5e-06 Score=54.07 Aligned_cols=30 Identities=17% Similarity=0.524 Sum_probs=26.1
Q ss_pred CCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 25 NTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 25 ~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+|+.++|.|.|.|.|.|+|+|++ ||..+..
T Consensus 260 ~g~~v~l~C~~~g~P~p~i~W~~-~g~~l~~ 289 (347)
T 2ifg_A 260 EMHHWCIPFSVDGQPAPSLRWLF-NGSVLNE 289 (347)
T ss_dssp ESSSEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred cCceEEEEEEeeecCCCcEEEEe-CCEECCC
Confidence 46779999999999999999997 8877653
No 265
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.00 E-value=6.3e-06 Score=48.62 Aligned_cols=38 Identities=18% Similarity=0.371 Sum_probs=29.4
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccCCCe---EEEEeCCCee
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSPNPE---IIWIRSDGTA 52 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~---I~W~~~dg~~ 52 (61)
++.|+ .+....|+.++|.|.+.|.|.|. |+|+|.++..
T Consensus 5 V~vp~-~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~ 45 (225)
T 4fmk_A 5 VRVLP-EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTV 45 (225)
T ss_dssp EECCS-EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCE
T ss_pred EEeCC-EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcc
Confidence 45554 45566788999999999999875 8999976654
No 266
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=97.99 E-value=9.3e-06 Score=46.62 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=30.1
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
.+++. |..+.+.+|..++|.|.+.|.|.+.|.|++.+
T Consensus 5 ~v~q~-p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~ 41 (119)
T 2e27_L 5 QMTQS-PSSLSASLGGKVTITCKANQDIKKKIAWYQHK 41 (119)
T ss_dssp CEEEE-CSEEEEETTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eeEec-CCeEEEeCCCCEEEEEEeCCCCCceEEEEEEC
Confidence 45566 45566778999999999999999999999853
No 267
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.99 E-value=4.6e-06 Score=50.47 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=31.9
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEeccc-C-CCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-P-NPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P-~P~I~W~~~dg~~i~ 54 (61)
..+|.+...++..... .|..++|.|.|.|. | .|+|+|++ ||..+.
T Consensus 133 ~~~p~v~~~~~~~~~~-~g~~v~l~C~~~~~~p~~~~v~W~k-~g~~~~ 179 (237)
T 3sob_L 133 VAAPSVFIFPPSDEQL-KSGTASVVCLLNNFYPREAKVQWKV-DNALQS 179 (237)
T ss_dssp CBCCEEEEECCCHHHH-HHTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCCceEEeCCChhhc-cCCceEEEEEEcccCCCceEEEEEE-CCCCCC
Confidence 4566666655554332 35569999999994 5 59999998 777664
No 268
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.99 E-value=1.1e-05 Score=49.72 Aligned_cols=38 Identities=13% Similarity=0.326 Sum_probs=31.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC-----CCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-----~P~I~W~~~ 48 (61)
+|.|++.| ..+.+.+|+.++|.|.+.|.| .|.|+|++.
T Consensus 38 ~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 38 ELVMTQSP-LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp CCCEEEEC-SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred ceeEEeCC-ceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 56677764 456678899999999999999 599999974
No 269
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.99 E-value=5.2e-06 Score=49.75 Aligned_cols=34 Identities=12% Similarity=0.356 Sum_probs=28.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
.+++. + .+.+..|+.++|.|.+.|.|.|.|+|++
T Consensus 3 ~v~~~-~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k 36 (213)
T 3mj8_L 3 TLTQP-P-LVSVALGQKATITCSGDKLSDVYVHWYQ 36 (213)
T ss_dssp CBBCC-S-EEEEETTSCEEEEEECSSTTTSCEEEEE
T ss_pred eEEeC-C-cEEEeCCCCEEEEEEcCCCCCceEEEEE
Confidence 34444 4 6677889999999999999999999998
No 270
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=97.99 E-value=1.8e-05 Score=48.34 Aligned_cols=41 Identities=12% Similarity=0.392 Sum_probs=30.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg~~i 53 (61)
+|.++..|. . .+.+|..++|.|.+.+. |.|.|+|++ ||..+
T Consensus 89 ~p~~~~~~~-~-~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~ 130 (204)
T 3sgj_C 89 GWLLLQAPR-W-VFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKGR 130 (204)
T ss_dssp SSEEEECSC-S-EEETTCCEEEEEEEGGGCCCEEEEEEE-TTEEE
T ss_pred CceEecCCc-e-eEeCCCcEEEEEEecCCCCCceEEEEE-CCcEe
Confidence 455555544 3 35578889999999766 679999998 77665
No 271
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=97.98 E-value=2.5e-05 Score=45.96 Aligned_cols=31 Identities=10% Similarity=0.353 Sum_probs=25.7
Q ss_pred EecCCCCeEEEEEecccCCC-eEEEEeCCCeee
Q psy11557 22 DFSNTTGAQVECTARGSPNP-EIIWIRSDGTAV 53 (61)
Q Consensus 22 ~~~~g~~v~L~C~A~G~P~P-~I~W~~~dg~~i 53 (61)
.+.+|..++|.|.+.|.|++ .|+|++ ||..+
T Consensus 99 ~~~~g~~~~l~C~~~~~~~~~~~~W~k-~g~~~ 130 (175)
T 1fnl_A 99 VFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKDR 130 (175)
T ss_dssp EEETTCCEEEEEEECTTCCCEEEEEEE-TTEEE
T ss_pred eecCCCCEEEEEEcCCCCCceEEEEEE-CCeEc
Confidence 35678889999999998765 999998 77665
No 272
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=97.98 E-value=2.8e-06 Score=52.31 Aligned_cols=45 Identities=29% Similarity=0.495 Sum_probs=30.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~~ 55 (61)
.|.+...++....+..|..++|.|.|.|. |.| .|+|++ ||..|..
T Consensus 123 ~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 169 (245)
T 3nfj_J 123 PPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp CCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE-CCEECCC
Confidence 45444443443333446779999999995 555 789998 8888754
No 273
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.97 E-value=1.2e-05 Score=46.28 Aligned_cols=36 Identities=22% Similarity=0.570 Sum_probs=29.4
Q ss_pred EcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDG 50 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg 50 (61)
.+++..+.+.+|..++|.|.+.|. |.+.|.|++.+|
T Consensus 7 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~ 43 (127)
T 2jju_A 7 IQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 43 (127)
T ss_dssp ECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSS
T ss_pred EeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCC
Confidence 444566677889999999999987 788999999654
No 274
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.97 E-value=1.3e-05 Score=50.29 Aligned_cols=40 Identities=18% Similarity=0.247 Sum_probs=30.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCC-----eEEEEeC-CCe
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRS-DGT 51 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-----~I~W~~~-dg~ 51 (61)
|.+++. +..+.+..|..++|.|.+.|.|.| .|+|++. +|.
T Consensus 122 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~ 167 (256)
T 1nqb_A 122 IELTQT-PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQ 167 (256)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTS
T ss_pred ccEEec-CcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCC
Confidence 455555 445567788899999999999986 9999984 344
No 275
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.97 E-value=1.3e-05 Score=45.21 Aligned_cols=38 Identities=18% Similarity=0.374 Sum_probs=30.0
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDG 50 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg 50 (61)
.+++. +..+.+..|..++|.|.+.+. |.+.|.|++.+|
T Consensus 9 ~v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~ 47 (120)
T 2yz1_A 9 KVTQP-EKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVG 47 (120)
T ss_dssp CEECC-SSEEEECTTCCEEECCEESCCCSCCCEEEEESSS
T ss_pred EEECC-CceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCC
Confidence 34444 566677889999999999986 788999999654
No 276
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.96 E-value=8.5e-06 Score=56.83 Aligned_cols=36 Identities=11% Similarity=0.156 Sum_probs=30.3
Q ss_pred CCCcEEecCCCCeEEEEEec-ccCCCeEEEEeCCCeee
Q psy11557 17 PPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~-G~P~P~I~W~~~dg~~i 53 (61)
|+..+.+..|+.+.|.|.|. |.|.|.|+|++ ||..+
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k-~g~~l 269 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKAL 269 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEEC-SSSCC
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEE-CCEEC
Confidence 45667788899999999997 99999999998 55544
No 277
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.96 E-value=9.9e-06 Score=54.56 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=33.6
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCC--CeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~--P~I~W~~~dg~~i~ 54 (61)
..+|.+...++....+.+|..++|.|.|.|.++ ++|+|++ ||..+.
T Consensus 347 ~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 394 (475)
T 1iga_A 347 TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELP 394 (475)
T ss_pred CCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEE-CCEECC
Confidence 456776666555433456777999999999743 5999998 788764
No 278
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=97.96 E-value=3.4e-06 Score=51.34 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=27.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC-CC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-NP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-~P-~I~W~~~dg~~i~ 54 (61)
+|.+...++..... .|..++|.|.|.|.+ .| +|+|++ ||..+.
T Consensus 134 ~p~v~~~~~~~~~~-~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~ 178 (233)
T 3bqu_C 134 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQ 178 (233)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCEEEEEEE-C-----
T ss_pred CCEEEEeCCCHHhh-cCCceEEEEEEccccCCceEEEEEE-CCeeCC
Confidence 56666655554333 466799999999964 44 799998 776653
No 279
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.96 E-value=1.4e-05 Score=48.09 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=30.9
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.+|.+...|. . .+.+|..++|.|.|.| |.|.++|++ ||..+
T Consensus 107 ~~p~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 147 (201)
T 1nkr_A 107 EKPSLSAQPG-P-TVLAGENVTLSCSSRS-SYDMYHLSR-EGEAH 147 (201)
T ss_dssp CCCEEEEESC-S-EECTTCEEEEEEEESS-CCSEEEEEE-TTCSS
T ss_pred CCCceecCCC-C-ccCCCCeEEEEEeCCC-CCceEEEEE-CCccc
Confidence 3567777654 3 3567888999999998 679999998 55543
No 280
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.96 E-value=1.6e-05 Score=47.50 Aligned_cols=40 Identities=13% Similarity=0.302 Sum_probs=27.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.|.+...| .. .+.+|..++|.|.|.|. .|.|+|++ ||..+
T Consensus 101 ~p~i~~~~-~~-~v~~G~~v~L~C~~~~~-~~~v~W~k-~g~~~ 140 (198)
T 1ugn_A 101 KPTLSAQP-SP-VVNSGGNVTLQCDSQVA-FDGFILCK-EGEDE 140 (198)
T ss_dssp CCEEEEES-CS-EEETTCCEEEEEECSSC-CSEEEEEE-C----
T ss_pred CCccccCC-cc-ccCCCCcEEEEEecCCC-CcEEEEEE-CCCcc
Confidence 45665553 33 35578889999999999 89999998 55544
No 281
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.96 E-value=8.6e-06 Score=50.07 Aligned_cols=39 Identities=10% Similarity=-0.002 Sum_probs=30.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCe-----EEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-----IIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-----I~W~~~d 49 (61)
|.+...++..+.+..|+.++|.|.+.|.|.|. |+|++.+
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~ 46 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKS 46 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEEC
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEc
Confidence 34444556666677898999999999999997 9999854
No 282
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.96 E-value=1.4e-05 Score=49.60 Aligned_cols=42 Identities=14% Similarity=0.246 Sum_probs=31.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC--eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P--~I~W~~~dg~~i~ 54 (61)
...|.+... . .+.+|+.++|.|.+.| .|.| +|+|++ ||..+.
T Consensus 4 ~~~p~~~~~--~--~v~~G~~v~l~C~~~g~~p~p~~~v~W~k-~~~~l~ 48 (265)
T 2oz4_A 4 ATPPQLVSP--R--VLEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRLN 48 (265)
T ss_dssp SSCCEEECC--S--EEETTEEEEEEEEEESCSCGGGCEEEEEE-TTEECC
T ss_pred CCCCccccC--c--eEecCCCEEEEEEccCCCCCcceEEEEEe-CCEECC
Confidence 345655532 2 3467888999999999 8988 999998 776653
No 283
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=97.95 E-value=5.8e-06 Score=52.77 Aligned_cols=38 Identities=11% Similarity=0.200 Sum_probs=30.0
Q ss_pred EcCCCcEEecCCCCeEEEEEeccc-------CCCeEEEEeCCCeeec
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGS-------PNPEIIWIRSDGTAVG 54 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~-------P~P~I~W~~~dg~~i~ 54 (61)
..|.+ ..+..|+.++|.|.|.|+ |.|.|+|++ ||..|.
T Consensus 9 i~P~~-~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~-~g~~i~ 53 (303)
T 1i1r_A 9 ISPES-PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKT-NHFTIP 53 (303)
T ss_dssp EESSS-CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEE-TTEECC
T ss_pred EccCC-ceEeCCCCEEEEEEECCccccccCCChhheEEEE-CCEECC
Confidence 34444 446788899999999974 999999998 787763
No 284
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.94 E-value=2.1e-05 Score=44.13 Aligned_cols=38 Identities=11% Similarity=0.283 Sum_probs=30.9
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
..+++.| ..+...+|..++|.|.+.+.+.+.|.|++.+
T Consensus 5 ~~v~q~p-~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~ 42 (111)
T 1i3g_L 5 IVLTQSH-KFMSTSVGDRVSITCKASQDVGTAVAWYQQK 42 (111)
T ss_dssp CCEEESC-SEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred ceEEEeC-CEEEEcCCCCEEEEEEeCCCCCCCEEEEEEC
Confidence 4556664 4566788999999999999999999999854
No 285
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.94 E-value=1.3e-05 Score=50.90 Aligned_cols=42 Identities=10% Similarity=0.198 Sum_probs=32.2
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCee
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTA 52 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~ 52 (61)
...+|.|...|. .+ +..|+.++|.|.|.|. .|.++|++ ||..
T Consensus 21 ~~~~P~i~~~p~-~~-v~~G~~v~L~C~~~~~-~~~~~W~k-~g~~ 62 (316)
T 3vh8_G 21 GQDKPFLSAWPS-AV-VPRGGHVTLRCHYRHR-FNNFMLYK-EDRI 62 (316)
T ss_dssp ---CCEEEEESC-SE-EETTSCEEEEEEBTTB-CCSEEEEE-SSCS
T ss_pred CCCCCEeeccCC-Cc-cCCCCCEEEEEEccCC-CceEEEEe-CCCc
Confidence 345889999976 43 4578889999999998 79999998 5544
No 286
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.94 E-value=1.5e-05 Score=50.24 Aligned_cols=46 Identities=17% Similarity=0.414 Sum_probs=32.5
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecc-cCC-CeEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~-P~I~W~~~dg~~i~ 54 (61)
...+|.+...++....+ .|..++|.|.|.| .|. .+|+|++ ||..+.
T Consensus 120 ~~~~P~v~v~~~~~~~~-~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 167 (239)
T 1i1c_A 120 TPRGPQVYTMAPPKEEM-TQSQVSITCMVKGFYPPDIYTEWKM-NGQPQE 167 (239)
T ss_dssp CCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCcCCEEEEECCChHHh-cCCcEEEEEEEeeeECCCeEEEEEE-CCEECC
Confidence 34567776665554333 3556999999999 555 3899998 888764
No 287
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.94 E-value=5.3e-06 Score=52.89 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=34.4
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEec-------ccCCCeEEEEeCCCee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTAR-------GSPNPEIIWIRSDGTA 52 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~-------G~P~P~I~W~~~dg~~ 52 (61)
...|.|...|.+. .+.+|+.++|.|.+. |.|.|.|+|++ +|..
T Consensus 16 ~~~p~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k-~~~~ 65 (339)
T 3o4o_C 16 RSCRFRGRHYKRE-FRLEGEPVALRCPQVPYWLWASVSPRINLTWHK-NDSA 65 (339)
T ss_dssp --CEEEEECSCCE-EEETTBCCEEECTTSCSSCCSTTSSCCBCCCEE-SSCC
T ss_pred hhhHhhCcCceEE-EEECCccEEEEeccccccccccCCCCceEEEEE-CCCC
Confidence 4568899996554 567888999999998 99999999999 5554
No 288
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=97.94 E-value=2.7e-05 Score=47.33 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=29.3
Q ss_pred EEE-cCCCcEEecCCCCeEEEEEecccCCC---eEEEEeCC
Q psy11557 13 FIK-EPPNRIDFSNTTGAQVECTARGSPNP---EIIWIRSD 49 (61)
Q Consensus 13 f~~-~Pp~~~~~~~g~~v~L~C~A~G~P~P---~I~W~~~d 49 (61)
|.+ .|.+.+.+..|+.++|.|.+.|.|.| .|+|++++
T Consensus 5 f~V~~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~ 45 (226)
T 4f80_A 5 FSVLGPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSS 45 (226)
T ss_dssp CEEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETT
T ss_pred EEEECCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECC
Confidence 544 35555777889999999999998877 69999854
No 289
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.94 E-value=9e-06 Score=51.59 Aligned_cols=34 Identities=24% Similarity=0.699 Sum_probs=28.6
Q ss_pred EEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 21 IDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..+..|..+.|.|.+.|+|.|.|+|++ ||..+..
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~-~~~~~~~ 166 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRG 166 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCB-TTBCCCT
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEE-CCEECcc
Confidence 456678889999999999999999998 7766643
No 290
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.93 E-value=1.1e-05 Score=51.74 Aligned_cols=44 Identities=9% Similarity=0.232 Sum_probs=29.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.+...++..... .|..++|.|.|.| .|.+ +|+|++ ||.+|.
T Consensus 218 ~~P~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~ 263 (323)
T 2wqr_A 218 AAPEVYAFATPEWPG-SRDKRTLACLIQNFMPEDISVQWLH-NEVQLP 263 (323)
T ss_dssp BCCEEEEEECCCCTT-CTTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCEEEEeCCChHHh-cCCcEEEEEEeeeeeCCCcEEEEEE-CCEECC
Confidence 466655443332222 3778999999999 4544 899998 887764
No 291
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=97.93 E-value=1.6e-05 Score=48.75 Aligned_cols=36 Identities=17% Similarity=0.434 Sum_probs=29.9
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
+.+++. +..+.+.+|+.++|.|.+.|.|.|.|+|++
T Consensus 2 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (246)
T 4dzb_B 2 AVVSQH-PSWVISKSGTSVKIECRSLDFQATTMFWYR 37 (246)
T ss_dssp CCEEEE-CSEEEEETTSCEEEEEEESSSCCCSEEEEE
T ss_pred CccEEC-CcEEEEeCCCcEEEEeEecCCCceEEEEEE
Confidence 345666 455667789999999999999999999998
No 292
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.93 E-value=7.8e-06 Score=49.90 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=30.4
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccC----CCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P----~P~I~W~~~d 49 (61)
.|++. |..+.+.+|+.++|.|.+.|.| .|.|+|++.+
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~ 43 (240)
T 1moe_A 3 VLTQS-PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQK 43 (240)
T ss_dssp CEEEE-CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEEC
T ss_pred ceEee-CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEEC
Confidence 45565 5556678899999999999999 8999999853
No 293
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.93 E-value=3.2e-06 Score=51.33 Aligned_cols=44 Identities=20% Similarity=0.364 Sum_probs=30.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
.+|.+...++..... .|..++|.|.|.|.++| +|+|++ ||..+.
T Consensus 134 ~~p~v~~~~~~~~~~-~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~ 179 (234)
T 2j6e_L 134 AAPSVTLFPPSSEEL-QANKATLVCLISDFFPGAVTVAWKA-DGAPVK 179 (234)
T ss_dssp CCCCCCEECCCHHHH-TTSCCCEEECCCBCSSCCCEEEEEE-TTEECC
T ss_pred CCCcccccCCChhHh-cCCceEEEEEEEEEcCCceEEEEEE-CCEECC
Confidence 355555544443333 46679999999996543 899998 887763
No 294
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.93 E-value=1.4e-05 Score=47.01 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=26.2
Q ss_pred ecCCCCeEEEEEe-cccCCCeEEEEeCCCeeec
Q psy11557 23 FSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 23 ~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~ 54 (61)
+..|..+.|.|.+ .|.|.|.|+|++ ||..+.
T Consensus 97 ~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (176)
T 1f2q_A 97 VMEGQPLFLRCHGWRNWDVYKVIYYK-DGEALK 128 (176)
T ss_dssp EETTSCEEEEEEEGGGCCEEEEEEEE-TTEECC
T ss_pred eeCCCCEEEEEEecCCCCceEEEEEE-CCEEEe
Confidence 4578889999999 578889999998 887764
No 295
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=97.92 E-value=1.3e-05 Score=56.99 Aligned_cols=43 Identities=19% Similarity=0.331 Sum_probs=34.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEE-EEe-CCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEII-WIR-SDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~-W~~-~dg~~i 53 (61)
.+|.|. .|+ ++.+..|..++|.|.|.|+|.|.|+ |++ .||..+
T Consensus 164 ~~p~~~-~~~-~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l 208 (731)
T 2v5y_A 164 RTPHFL-RIQ-NVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDA 208 (731)
T ss_dssp SSCEEC-CCC-CEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCE
T ss_pred cccccc-ccc-ceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccc
Confidence 578888 544 4567788899999999999999999 874 477665
No 296
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.92 E-value=1.3e-05 Score=50.85 Aligned_cols=37 Identities=16% Similarity=0.390 Sum_probs=29.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
.+.+++. +..+.+.+|..++|.|.+.|.| |.|+|++.
T Consensus 162 ~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~ 198 (282)
T 1qok_A 162 ENVLTQS-PAIMSASPGEKVTITCSASSSV-SYMHWFQQ 198 (282)
T ss_dssp CCCEEEE-CSEEEECTTCCEEEEEEESSCC-SCCEEEEE
T ss_pred ceEEecC-CCEEEEcCCCcEEEEEEecCCC-ceEEEEEE
Confidence 3455665 4455577888999999999999 99999984
No 297
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=97.91 E-value=3.2e-05 Score=43.45 Aligned_cols=36 Identities=14% Similarity=0.323 Sum_probs=28.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
.+++. |..+.+.+|+.++|.|.+.|. |.+.|.|++.
T Consensus 2 ~v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (111)
T 2ywz_A 2 WVDQT-PRTITKETGESLTIKCVLKDHSCGLSSTTWYRT 39 (111)
T ss_dssp EEEEE-CSEEEECTTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred eeEEC-CCcEEEccCCCEEEEeEECCCCCCCCEEEEEEe
Confidence 35565 455667889999999999987 6899999985
No 298
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.91 E-value=7.8e-06 Score=51.06 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=29.4
Q ss_pred CCcEEecCCCCeEEEEEecccCC-CeEEEEeCCCeeecC
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDGTAVGD 55 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~-P~I~W~~~dg~~i~~ 55 (61)
+..+.+.+|..+.|.|.+.| |. |.|+|++.||..+..
T Consensus 98 ~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~ 135 (290)
T 2o26_X 98 GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPT 135 (290)
T ss_dssp CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCT
T ss_pred ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCC
Confidence 33455667888999999997 88 999997778887743
No 299
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=97.91 E-value=1.3e-05 Score=49.69 Aligned_cols=44 Identities=32% Similarity=0.573 Sum_probs=28.9
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-C-CCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-P-NPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P-~P~I~W~~~dg~~i~ 54 (61)
.+|.+...++....+..+ .++|.|.|.|. | .++|+|++ ||..|.
T Consensus 117 ~~P~v~v~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 162 (231)
T 2w59_A 117 TPPLIYPFAPHPEELSLS-RVTLSCLVRGFRPRDIEIRWLR-DHRAVP 162 (231)
T ss_dssp BCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred cCCEEEEeCCCHHHhccC-ceEEEEEEEeccCCCcEEEEEE-CCEECC
Confidence 456544333332223334 59999999996 4 47999998 887764
No 300
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.90 E-value=7.9e-06 Score=49.05 Aligned_cols=31 Identities=13% Similarity=0.418 Sum_probs=26.8
Q ss_pred CCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
|..+.+..|..++|.|.+.|.|.|.|+|++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 36 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQ 36 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEE
Confidence 4555677898999999999999999999985
No 301
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=97.90 E-value=1.7e-05 Score=47.27 Aligned_cols=41 Identities=15% Similarity=0.295 Sum_probs=30.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.+|.+...|.. .+..|..++|.|.+.|.| |.++|++ ||..+
T Consensus 93 ~~p~i~~~p~~--~v~~G~~v~l~C~~~~~~-~~~~w~k-~g~~~ 133 (184)
T 2gi7_A 93 AKPSLSAQPGP--AVSSGGDVTLQCQTRYGF-DQFALYK-EGDPA 133 (184)
T ss_dssp CCCEEEEECCC--SSCCTTCEEEEEECSSCC-CEEEEEE-CCCCT
T ss_pred CCCEEEeCCCc--eecCCCcEEEEEEcCCCC-cEEEEEE-CCCcC
Confidence 46777777532 345788899999999866 7999998 66554
No 302
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.90 E-value=1.5e-05 Score=48.18 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=28.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC-Ce
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD-GT 51 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d-g~ 51 (61)
+.+|+. +.+..|..++|.|.+.|.| .|.|+|++.+ |.
T Consensus 4 ~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~ 43 (219)
T 1c1e_H 4 LVQSGP-ELKKPGETVKISCKASGYMFTNYGMNWVKQAPGK 43 (219)
T ss_dssp EEECCC-EEECTTCCEEEEEEEESSCGGGSEEEEEEECTTS
T ss_pred EeCCCC-eEecCCCcEEEEEEEeCcccccceEEEEEeCCCC
Confidence 344444 5577888999999999986 8999999864 44
No 303
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.90 E-value=1.1e-05 Score=48.33 Aligned_cols=35 Identities=9% Similarity=0.261 Sum_probs=28.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC---CCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP---NPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P---~P~I~W~~~d 49 (61)
+++ | ..+.+..|..++|.|.+.|.| .|.|+|++.+
T Consensus 4 v~~-p-~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~ 41 (212)
T 1q0x_L 4 VTQ-E-SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEK 41 (212)
T ss_dssp EEE-C-SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEE
T ss_pred EEC-C-CeEeecCCCCEEEEEEecccccCCCCeEEEEEeC
Confidence 455 4 455677888999999999998 5899999853
No 304
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.89 E-value=3e-05 Score=48.09 Aligned_cols=38 Identities=16% Similarity=0.394 Sum_probs=31.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCC-CeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN-PEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~-P~I~W~~~ 48 (61)
+|.+++.| ..+.+.+|..++|.|.+.|.|. |.|+|++.
T Consensus 149 ~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 187 (256)
T 3juy_B 149 EIVLTQAP-GTLSLSPGERATFSCRSSHSIRSRRVAWYQH 187 (256)
T ss_dssp CCCEEEEC-SEEEECTTSCEEEEEEESSCCTTCCEEEEEE
T ss_pred eeEEEecC-CeEEEeCCCCEEEEEEECCCcCCeeEEEEEE
Confidence 55677775 4556778989999999999997 99999883
No 305
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.89 E-value=6.7e-06 Score=51.02 Aligned_cols=43 Identities=26% Similarity=0.486 Sum_probs=29.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
+|.+...++..... .|..++|.|.|.|. |.| +|+|++ ||..+.
T Consensus 150 ~P~v~~~~~~~~~~-~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~ 194 (252)
T 3bkj_L 150 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQ 194 (252)
T ss_dssp CCEEEEECCCHHHH-HHTEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CcEEEEeCCChhhc-CCCcEEEEEEEeeEeCCCcEEEEEE-CCeecC
Confidence 46666554443322 46679999999994 554 799998 777664
No 306
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.88 E-value=1.7e-05 Score=49.53 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=29.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
.+++. +..+.+.+|+.++|.|.+.|.|.|.|.|++.
T Consensus 5 ~v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 40 (256)
T 3tf7_C 5 SVTQP-DARVTVSEGASLQLRCKYSYSATPYLFWYVQ 40 (256)
T ss_dssp EEECS-CSEEEEETTSCEEECCEEECSSCCEEEEEEE
T ss_pred EEEec-CceEEecCCCeEEEEEEeCCCCCceEEEEEE
Confidence 45555 5566678899999999999999999999983
No 307
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.87 E-value=7.1e-06 Score=51.25 Aligned_cols=36 Identities=14% Similarity=0.325 Sum_probs=28.7
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
.+++. +..+.+.+|..++|.|.+.|.|.|.|+|++.
T Consensus 141 ~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 176 (257)
T 1f3r_B 141 KLTQS-PSLLSASVGDRVTLSCKGSQNINNYLAWYQQ 176 (257)
T ss_dssp CSCEE-TSEECCCTTCCEEEEEECSSCCBTCEEEEEE
T ss_pred EEEcc-CCEEEEcCCCCEEEEEEECCcCCCcEEEEEE
Confidence 34444 4455567888999999999999999999984
No 308
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=97.87 E-value=1.9e-05 Score=48.48 Aligned_cols=34 Identities=26% Similarity=0.563 Sum_probs=28.8
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
+++. +..+.+..|..++|.|.+.|.|.+.|+|++
T Consensus 4 v~~~-p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k 37 (245)
T 3nfj_J 4 IHQW-PATLVQPVGSPLSLECTVEGTSNPNLYWYR 37 (245)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEEESCSSCEEEEEE
T ss_pred eeCC-CceEEecCCCCEEEEEEecCCCCceEEEEE
Confidence 3444 566667789999999999999999999998
No 309
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.87 E-value=6.4e-06 Score=48.62 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=23.6
Q ss_pred ecCCCCeEEEEEe-cccCCCeEEEEeCC
Q psy11557 23 FSNTTGAQVECTA-RGSPNPEIIWIRSD 49 (61)
Q Consensus 23 ~~~g~~v~L~C~A-~G~P~P~I~W~~~d 49 (61)
+..|..++|.|.+ .|.|.|.|+|++++
T Consensus 133 ~~~g~~v~l~C~~~~g~p~~~v~W~~~~ 160 (214)
T 3jz7_A 133 EEIGNDFKLKCEPKEGSLPLQFEWQKLS 160 (214)
T ss_dssp CBTTCCEEEEEECSBCCSSCEEEEEECS
T ss_pred eecCCcEEEEecCCCCCCCCEEEEEECC
Confidence 4567789999999 89999999999953
No 310
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.87 E-value=2.7e-05 Score=52.61 Aligned_cols=43 Identities=14% Similarity=0.259 Sum_probs=35.0
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTA 52 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~ 52 (61)
..+|.|...|... .+..|+.++|.|.+.|.|.|. |+|++ +|..
T Consensus 209 ~~~p~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~~i~W~~-~~~~ 252 (524)
T 2ec8_A 209 KAVPVVSVSKASY-LLREGEEFTVTCTIKDVSSSVYSTWKR-ENSQ 252 (524)
T ss_dssp CSCCEEECSCSEE-EEETTSCEEEEEEEEESSTTCEEEEEE-TTCS
T ss_pred CCCCcEEecCCcc-eEEcCCcEEEEEEEecCCCcEEEEEEe-CCCC
Confidence 4678888886554 567888999999999999998 99999 4444
No 311
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=97.87 E-value=3.7e-05 Score=44.47 Aligned_cols=32 Identities=13% Similarity=0.460 Sum_probs=26.1
Q ss_pred EecCCCCeEEEEEe-cccCCCeEEEEeCCCeeec
Q psy11557 22 DFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 22 ~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~ 54 (61)
.+.+|..+.|.|.+ .|.|.|.|+|++ ||..+.
T Consensus 96 ~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (170)
T 3ry4_A 96 EFQEGETIMLRCHSWKDKPLVKVTFFQ-NGKSQK 128 (170)
T ss_dssp EECTTCCEEEEEEEGGGCCEEEEEEEE-TTEEEE
T ss_pred eeecCCeEEEEEECCCCCCCceEEEEE-CCeEcc
Confidence 35678889999999 567789999998 777654
No 312
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.86 E-value=1.4e-05 Score=51.73 Aligned_cols=45 Identities=20% Similarity=0.502 Sum_probs=30.9
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEeccc-C-CCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-P-NPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P-~P~I~W~~~dg~~i~ 54 (61)
..+|.+...++....+. +..++|.|.|.|. | .+.|+|++ ||..+.
T Consensus 240 ~~~P~v~~~~~~~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 286 (344)
T 1za6_B 240 PREPQVYTLPPSRDELT-KNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 286 (344)
T ss_dssp CBCCEEEEECCCGGGGG-SSSEEEEEEEEEEBSSCCEEEEES-SSSCCC
T ss_pred CcCCEEEEeCCChHhcc-CCcEEEEEEEeeEECCCeEEEEEE-CCeECC
Confidence 35676665555443334 4459999999996 4 46999998 777664
No 313
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.86 E-value=9.9e-06 Score=50.42 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=20.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
.|.+.+.| ..+.+.+|+.++|.|.+.|.|.|.|.|++
T Consensus 2 s~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 38 (259)
T 3omz_A 2 SSNLEGRT-KSVIRQTGSSAEITCDLAEGSTGYIHWYL 38 (259)
T ss_dssp ----------CEEEETTCCEEEECCC-----CEEEEEE
T ss_pred ccccccCC-ceeEecCCCcEEEEEEEccCCCcEEEEEE
Confidence 35666664 44567788899999999999999999998
No 314
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.85 E-value=8.8e-06 Score=50.18 Aligned_cols=43 Identities=26% Similarity=0.479 Sum_probs=29.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
+|.+...++...... |..++|.|.|.|. |. +.|+|++ ||..+.
T Consensus 154 ~P~v~~~~~~~~~~~-g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 198 (254)
T 2c1o_A 154 APTVSIFPPSSEQLT-SGGASVVCFLNNFYPKDINVKWKI-DGSERQ 198 (254)
T ss_dssp CCEEEEECCCHHHHH-TTEEEEEEEEEEEBSSCCEEEEEE-SSSEEC
T ss_pred CCeeEeecCChhhcc-CCcEEEEEEEecccCCCcEEEEEE-CCCccc
Confidence 566666555543333 4479999999995 44 4699998 777664
No 315
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=97.85 E-value=1.2e-05 Score=49.05 Aligned_cols=41 Identities=17% Similarity=0.425 Sum_probs=28.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
.|.+...++... ...|..++|.|.|.|. |.| .|+|++ ||..
T Consensus 122 ~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 164 (215)
T 1c5d_H 122 APSVYPLAPGCG-DTTSSTVTLGCLVKGYFPEPVTVTWNS-GALS 164 (215)
T ss_dssp CCCEEEECCCSS-CCCCSSEEEEEEEEEEBSSCCEEEEGG-GTTC
T ss_pred CCeEEeccCChh-hccCCcEEEEEEEeeeEcCCcEEEEcc-CCcc
Confidence 454444333332 3467789999999998 999 999998 5554
No 316
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=2.4e-05 Score=45.17 Aligned_cols=37 Identities=22% Similarity=0.583 Sum_probs=29.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDG 50 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~dg 50 (61)
+.+++..+.+..|..++|.|.+.+. |.+.|.|++.++
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~ 48 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 48 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecC
Confidence 3444566677889999999999987 688999999664
No 317
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.85 E-value=1.3e-05 Score=52.50 Aligned_cols=44 Identities=25% Similarity=0.499 Sum_probs=32.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~~ 55 (61)
+|.+...++....+ .|..+.|.|.|.| .|.| +|+|++ ||..+..
T Consensus 116 ~P~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~ 161 (438)
T 1qgc_4 116 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 161 (438)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCEEEecCCChhhc-cCCceEEEEEEccccCCCcEEEEEE-CCEEcCC
Confidence 56666655554333 3557999999998 7888 999998 8877643
No 318
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.85 E-value=1.2e-05 Score=52.78 Aligned_cols=44 Identities=18% Similarity=0.438 Sum_probs=31.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
.+|.+...++... ...|..++|.|.|.|. |.| .|+|++ ||..+.
T Consensus 342 ~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~~~ 387 (438)
T 1qgc_4 342 TPPSVYPLAPGSA-AAAASMVTLGCLVKGYFPEPVTVTWNS-GSLSSG 387 (438)
T ss_dssp BCCEEEEECCCGG-GCCSSEEEEEEEEESCBSSCCEEEEGG-GTCCSS
T ss_pred CCCeEEEcCcccc-cccCCcEEEEEEeccccCCCcEEEEec-CCCCCc
Confidence 3555554444432 3467789999999998 999 999987 776653
No 319
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.84 E-value=2e-05 Score=48.52 Aligned_cols=37 Identities=16% Similarity=0.331 Sum_probs=30.1
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccC-----CCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 49 (61)
.+++. |..+.+.+|+.++|.|.+.|.| .|.|.|++.+
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~ 44 (247)
T 1svz_A 3 LMTQT-PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQK 44 (247)
T ss_dssp CEEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred cEEec-CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEEC
Confidence 45666 4556678899999999999999 7999999853
No 320
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.84 E-value=5.7e-06 Score=53.12 Aligned_cols=30 Identities=13% Similarity=0.338 Sum_probs=25.9
Q ss_pred ecCCCCeEEEEEecccC-CCeEEEEeCCCeee
Q psy11557 23 FSNTTGAQVECTARGSP-NPEIIWIRSDGTAV 53 (61)
Q Consensus 23 ~~~g~~v~L~C~A~G~P-~P~I~W~~~dg~~i 53 (61)
..+|..+.|.|.+.|.| .|.|+|++ ||..+
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k-~~~~l 170 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYK-NNQEL 170 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEE-TTEEC
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEE-CCccC
Confidence 34577899999999999 99999998 77666
No 321
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=97.84 E-value=1.8e-05 Score=46.64 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=26.6
Q ss_pred cEEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 20 RIDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 20 ~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
.+.+.+|+.++|.|.+.|.|.|.|+|++++.
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~ 34 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQ 34 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTC
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCc
Confidence 3456788899999999999999999999654
No 322
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=97.83 E-value=2.8e-05 Score=43.59 Aligned_cols=35 Identities=14% Similarity=0.457 Sum_probs=27.4
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+.+.+|..++|.|.+.+.+ +.|.|++.+
T Consensus 4 v~q~-p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~ 38 (113)
T 1h5b_A 4 VEQS-PSALSLHEGTDSALRCNFTTTM-RSVQWFRQN 38 (113)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEESSCC-SEEEEEEEC
T ss_pred eEEC-CCEEEEecCCcEEEEEEECCCC-ceEEEEEEC
Confidence 4555 4555677888999999999976 899999853
No 323
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.83 E-value=2.6e-05 Score=51.78 Aligned_cols=44 Identities=23% Similarity=0.418 Sum_probs=31.9
Q ss_pred cceEEEcCCCcEE-ecCCCCeEEEEEecccC----CCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRID-FSNTTGAQVECTARGSP----NPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~-~~~g~~v~L~C~A~G~P----~P~I~W~~~dg~~i~ 54 (61)
+|.+...|+.... +..|+.++|.|.|.|.| .+.|+|++ ||..+.
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k-~~~~~~ 286 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFV-NNVEVH 286 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEECS
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEE-CCcccc
Confidence 6665444555433 46788899999999994 36999998 666553
No 324
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.83 E-value=1.7e-05 Score=48.76 Aligned_cols=39 Identities=15% Similarity=0.293 Sum_probs=24.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCe
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGT 51 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~ 51 (61)
+|.+...+... . ..+..+.|.|.|.| .|.| .|+|++ ||.
T Consensus 119 ~P~v~~~~~~~-~-~~~~~~~L~C~~~g~~P~pi~v~W~k-~g~ 159 (248)
T 3pv7_A 119 SPASRLLLDQV-G-MKENEDKYMCESSGFYPEAINITWEK-QTQ 159 (248)
T ss_dssp CCEEEEECC----------CEEEEEEEEEBSSCCEEEEEE-ECS
T ss_pred CCceEEecCCc-c-ccCCCcEEEEEEccEECCCeEEEEEE-CCc
Confidence 56666654432 2 24556889999999 8999 999998 553
No 325
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.82 E-value=3.6e-05 Score=46.42 Aligned_cols=28 Identities=21% Similarity=0.451 Sum_probs=22.8
Q ss_pred CCC-CeEEEEEeccc-CCCeEEEEeCCCeee
Q psy11557 25 NTT-GAQVECTARGS-PNPEIIWIRSDGTAV 53 (61)
Q Consensus 25 ~g~-~v~L~C~A~G~-P~P~I~W~~~dg~~i 53 (61)
+|. .++|.|.|.|. |.|+|+|++ ||..+
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~-~g~~l 151 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEA-LGNTL 151 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEE-TTEEE
T ss_pred CCCceEEEEEEEecCCCceEEEEEe-CCEEc
Confidence 454 69999999995 589999998 77665
No 326
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=97.81 E-value=1.8e-05 Score=52.85 Aligned_cols=43 Identities=26% Similarity=0.520 Sum_probs=30.7
Q ss_pred cceE-EEcCCCcEE-ecCCCCeEEEEEecccCCC----eEEEEeCCCeeec
Q psy11557 10 GPIF-IKEPPNRID-FSNTTGAQVECTARGSPNP----EIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f-~~~Pp~~~~-~~~g~~v~L~C~A~G~P~P----~I~W~~~dg~~i~ 54 (61)
+|.+ +. |+.... +..|..++|.|.|.|.|++ .|+|++ ||..+.
T Consensus 247 ~p~v~~~-~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k-~~~~~~ 295 (457)
T 1hzh_H 247 GPSVFLF-PPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVH 295 (457)
T ss_dssp SCEEEEE-CCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEE-TTEEEC
T ss_pred CceEEeE-CcCchhhcccCCceEEEEEEEcccCCCCceEEEEEe-CCcccc
Confidence 5654 55 444332 4568889999999999654 999998 666553
No 327
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=97.81 E-value=4.5e-05 Score=42.99 Aligned_cols=43 Identities=16% Similarity=0.259 Sum_probs=28.9
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCC-----eEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-----~I~W~~~dg~~i 53 (61)
..+|.+...|... +.+|+.++|.|.+.+.|.+ +++|++ ||..+
T Consensus 6 ~~kP~l~~~p~~~--v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k-~g~~l 53 (108)
T 4hwn_A 6 FPAPILRAVPSAE--PQAGSPMTLSCQTKLPLQRSAARLLFSFYK-DGRIV 53 (108)
T ss_dssp CCCCEEEEESCSS--CBTTCCEEEEEEC---------CCEEEEEE-TTEEE
T ss_pred CCCCEEEecCCCc--CCCCCcEEEEEcccCCCCCcCcceEEEEEE-CCcCc
Confidence 4578888886543 4578889999999988766 499998 77665
No 328
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.81 E-value=2.1e-05 Score=46.96 Aligned_cols=40 Identities=10% Similarity=0.246 Sum_probs=29.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
+|.+...| +.. +.+|+.++|.|.|.| +.|.++|++ ||..+
T Consensus 99 ~p~i~~~p-~~~-v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 138 (188)
T 1oll_A 99 TPTLSVHP-GPE-VISGEKVTFYCRLDT-ATSMFLLLK-EGRSS 138 (188)
T ss_dssp CCEEEEES-CSE-EETTCEEEEEEECSS-SCSEEEEEE-ESSSC
T ss_pred CCeEEECC-CCc-cccCCEEEEEEEcCC-CCCEEEEEE-CCccc
Confidence 67777665 433 457888999999988 568999998 55443
No 329
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=97.80 E-value=3.3e-05 Score=43.32 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=32.3
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+|.+...|.. .+..|+.++|.|.+.+.+ +.+.|++ +|..+
T Consensus 3 ~~kP~i~~~p~~--~v~~G~~VtL~C~~~~~~-~~~~w~k-~g~~~ 44 (105)
T 2vsd_A 3 LPQPSLSLHPSQ--GVSLGDTVTLRCHLPRMA-AWVQLWL-NGTLR 44 (105)
T ss_dssp CCCCEEEEESCS--SCCTTCEEEEEEECCSSC-EEEEEEE-TTEEE
T ss_pred CCCCEEEeCCCC--CcCcCCCEEEEEEcCCCC-cEEEEEE-CCccc
Confidence 346888888765 356788899999999874 7899998 66543
No 330
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.80 E-value=1.7e-05 Score=48.81 Aligned_cols=35 Identities=17% Similarity=0.431 Sum_probs=28.9
Q ss_pred CCCcEEecCCCCeEEEEEe---cccCCCeEEEEeCCCe
Q psy11557 17 PPNRIDFSNTTGAQVECTA---RGSPNPEIIWIRSDGT 51 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A---~G~P~P~I~W~~~dg~ 51 (61)
++..+.+..|..++|.|.+ .|.|.|.|+|++.+|.
T Consensus 124 ~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~ 161 (268)
T 3mj6_A 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGS 161 (268)
T ss_dssp CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTT
T ss_pred CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCC
Confidence 4555667788899999999 7889999999996554
No 331
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.80 E-value=9.6e-06 Score=49.27 Aligned_cols=36 Identities=8% Similarity=0.096 Sum_probs=29.4
Q ss_pred CCcEEecCC--CCeEEEEEecccCCCeEEEEeC--CCeeec
Q psy11557 18 PNRIDFSNT--TGAQVECTARGSPNPEIIWIRS--DGTAVG 54 (61)
Q Consensus 18 p~~~~~~~g--~~v~L~C~A~G~P~P~I~W~~~--dg~~i~ 54 (61)
+..+.+.+| +.++|.|.+.| |.|.|+|.++ ||..+.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~ 53 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVP 53 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCcccc
Confidence 356677888 89999999998 8899999886 676654
No 332
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=97.80 E-value=1.4e-05 Score=49.07 Aligned_cols=28 Identities=18% Similarity=0.500 Sum_probs=23.2
Q ss_pred cCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 24 SNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 24 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
..|..++|.|.|.|. |.| .|+|++ ||..
T Consensus 141 ~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~~ 170 (225)
T 1op3_H 141 TSGGTAALGCLVKDYFPEPVTVSWNS-GALT 170 (225)
T ss_dssp CCCCEEEEEEEEEEEBSSCCEEECCT-TSCC
T ss_pred cCCCcEEEEEEEEeEECCCeEEEEec-CCCc
Confidence 457779999999997 888 999998 5544
No 333
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.79 E-value=9.4e-06 Score=51.71 Aligned_cols=44 Identities=20% Similarity=0.426 Sum_probs=34.4
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEe---cccC-CCeEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTA---RGSP-NPEIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A---~G~P-~P~I~W~~~dg~~i~ 54 (61)
.+|.|+.. +..+.+..|..+.|.|.| .|+| .|.|.|++ ||..+.
T Consensus 225 ~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~-~g~~~~ 272 (339)
T 3o4o_C 225 TIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA-NDTHIE 272 (339)
T ss_dssp CCCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEES-SSSCSS
T ss_pred CCCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEE-CCeecc
Confidence 36677666 555556778889999999 9999 99999997 666543
No 334
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.79 E-value=5.7e-05 Score=48.40 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=28.6
Q ss_pred CCcEEecCCCCeEEEEEecccC---CC-eEEEEeCCCeee
Q psy11557 18 PNRIDFSNTTGAQVECTARGSP---NP-EIIWIRSDGTAV 53 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P---~P-~I~W~~~dg~~i 53 (61)
+..+.+..|..+.|.|.|.|.| .| .|+|++ ||..+
T Consensus 235 ~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~-~g~~i 273 (329)
T 3oq3_B 235 DPKINVTIGEPANITCTAVSTSLLVDDVLIDWEN-PSGWI 273 (329)
T ss_dssp CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEEC-TTSCB
T ss_pred CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEE-CCeee
Confidence 4456678898999999999999 88 899998 55553
No 335
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.78 E-value=2.9e-05 Score=48.71 Aligned_cols=43 Identities=19% Similarity=0.325 Sum_probs=32.3
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccC-----CCeEEEEeCC
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 49 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 49 (61)
.....+.|++.| ..+.+.+|+.++|.|.+.|.| .+.|.|++.+
T Consensus 11 ~~~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 58 (268)
T 1x9q_A 11 DKASDVVMTQTP-LSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQK 58 (268)
T ss_dssp ---CCCCEEEEC-SEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred CccccceEEeeC-CeEEecCCCCEEEEeEecCCcccccCCceEEEEEEC
Confidence 334456777875 445577898999999999998 5999999853
No 336
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=97.78 E-value=3.4e-05 Score=48.74 Aligned_cols=40 Identities=18% Similarity=0.374 Sum_probs=32.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
..+.+++. +..+.+..|+.++|.|.+.|.|.+.|+|++.+
T Consensus 23 ~~~~v~~~-p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 62 (279)
T 2wbj_D 23 GGAVVSQH-PSWVISKSGTSVKIECRSLDFQATTMFWYRQF 62 (279)
T ss_dssp CCCCEEEE-CSEEEEETTSCEEEEEEESSSCEEEEEEEEEC
T ss_pred ccceEEeC-CCeEEecCCCeEEEEEEeCCCCCCeEEEEEeC
Confidence 45677777 45566778989999999999999999999854
No 337
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.77 E-value=4.3e-05 Score=46.52 Aligned_cols=35 Identities=11% Similarity=0.320 Sum_probs=28.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
.+++. |..+.+.+|+.++|.|. .|.|.|.|+|++.
T Consensus 2 ~v~q~-p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~ 36 (238)
T 2p1y_A 2 AVTQS-PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQ 36 (238)
T ss_dssp CEEEE-CSEEEEETTCCEEEEEE-ECSCCSEEEEEEE
T ss_pred cceEC-ccceEEeCCCEEEEEee-cCCCCccEEEEEE
Confidence 45665 45566778989999999 8999999999984
No 338
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.77 E-value=3e-05 Score=47.99 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=29.1
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+.++..|+... +.+|..++|.|.+.|.| .|.|+|++.
T Consensus 123 ~~~~~~~~~~~-v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 123 DIQLQESGPSL-VKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp CCEEEEECCSE-ECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceeeecCCcce-ecCCCeEEEEEEEEccccCCcceeeEee
Confidence 34556655554 67888999999999987 589999985
No 339
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=97.76 E-value=1.9e-05 Score=48.46 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=27.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
..|.+...++... ...|..++|.|.|.|. |.| +|+|++ +|..
T Consensus 129 ~~P~i~~~~~~~~-~~~g~~~~l~C~~~g~~P~p~~v~W~~-~~~~ 172 (228)
T 3bae_H 129 TAPSVYPLAPVCG-DTTGSSVTLGCLVKGYFPEPVTLTWNS-GSLS 172 (228)
T ss_dssp BCCEEEEECC------CCSEEEEEEEEEEEBSSCCEEEEGG-GTCC
T ss_pred CCCEEEEeccccc-ccCCCCEEEEEEEccEeCCCEEEEEee-CCcc
Confidence 4565554444433 3467789999999997 888 999998 4543
No 340
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.76 E-value=3.7e-05 Score=47.25 Aligned_cols=39 Identities=8% Similarity=0.327 Sum_probs=29.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
++.++..++..+ +..|..++|.|.+.|.| .|.|+|++.+
T Consensus 127 ~~~~~~~~~~~~-v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 167 (247)
T 1svz_A 127 SEVQLQQSGPEL-KKPGETVKISCKATNYAFTDYSMHWVKQA 167 (247)
T ss_dssp -CCEEEECCCEE-ECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CceEEeCCCcee-ecCCCcEEEEEEEcCcccCCcEEEEEEeC
Confidence 344555555554 67888999999999986 6799999853
No 341
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.76 E-value=2e-05 Score=52.34 Aligned_cols=45 Identities=18% Similarity=0.327 Sum_probs=30.6
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
..+|.+...++..... .+..++|.|.|.|.++| +|+|++ ||..+.
T Consensus 334 ~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 380 (434)
T 1igy_B 334 PRAPQVYTIPPPKEQM-AKDKVSLTCMITDFFPEDITVEWQS-DGQAPE 380 (434)
T ss_dssp CBCCCCEEECCCSSSS-SSSEEEEEEEEEEEBCSCEEEEEEE-TTSCCS
T ss_pred CcCCEEEEECCCHHHh-cCCcEEEEEEEEeeECCCeEEEEEE-CCEecC
Confidence 3467666665543323 34469999999996433 899998 777664
No 342
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.76 E-value=2e-05 Score=48.32 Aligned_cols=28 Identities=18% Similarity=0.387 Sum_probs=24.8
Q ss_pred EEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 21 IDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+.+.+|+.++|.|.+.|.| .|.|+|++.
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 41 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQ 41 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEecCCcEEEEEEeccccCCCceEEEEEe
Confidence 5677899999999999998 789999984
No 343
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=97.75 E-value=2.2e-05 Score=47.43 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=27.5
Q ss_pred cceEEEcCCCcEEecCCCCe-EEEEEec-ccCCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGA-QVECTAR-GSPNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v-~L~C~A~-G~P~P~I~W~~~ 48 (61)
+|.+...+.... ..|..+ .|.|.|. |.|.|.|+|+++
T Consensus 116 ~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p~v~W~k~ 154 (221)
T 3eow_R 116 KPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPAQITWHSD 154 (221)
T ss_dssp CCEEEEEEECCC--CCSSSCCEEEEEEESCSSCCCEEEECS
T ss_pred CCCceeecCCcc--cCCceEEEEEEECCCccCCCeeEEEeC
Confidence 666665544443 456667 5999998 999999999874
No 344
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=97.75 E-value=6.6e-05 Score=44.06 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=31.1
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
....+|.....|.+.. ..|..++|.|.|.|..++ +|+|++ ||+.+.
T Consensus 20 ~~~~~P~V~v~~~~~~--~~~~~~tL~C~a~gFyP~~I~v~W~k-nG~~i~ 67 (119)
T 1bii_B 20 AIQKTPQIQVYSRHPP--ENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 67 (119)
T ss_dssp -CCBCCEEEEEESSCC--CSSSCEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCCcCCEEEEEcCCcc--cCCCCEEEEEEEEeecCCCeEEEEEE-CCEECC
Confidence 3446676665433332 345579999999996444 899998 888774
No 345
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=97.75 E-value=6.5e-05 Score=42.42 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=29.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
.+|.....+... ...|..++|.|.|.|..++ +|+|++ ||+.+.
T Consensus 3 ~~P~V~v~~~~~--~~~~~~~~L~C~~~gfyP~~i~v~W~k-~g~~~~ 47 (99)
T 1lk2_B 3 KTPQIQVYSRHP--PENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 47 (99)
T ss_dssp BCCEEEEEESSC--CCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred cCCEEEEEcCCc--ccCCCCEEEEEEEEEEECCCcEEEEEE-CCEECC
Confidence 356555543333 2345579999999996433 899998 888764
No 346
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.74 E-value=5.9e-05 Score=46.69 Aligned_cols=38 Identities=16% Similarity=0.387 Sum_probs=30.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCC-eEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-~I~W~~~ 48 (61)
.|.+++. +..+.+.+|+.++|.|.+.|.|.| .|+|++.
T Consensus 141 ~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 179 (257)
T 3gkz_A 141 QIVLTQS-PAIMSASPGEKVTLTCSASSSVSSSHLYWYQQ 179 (257)
T ss_dssp CCCEECS-CSEEEECTTCCEEEEEEESSCCCGGGEEEEEE
T ss_pred ceEEEcC-CceEEEeCCCcEEEEEEEccCccceEEEEEEE
Confidence 4566666 455567889999999999999988 9999983
No 347
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.74 E-value=5.7e-05 Score=45.98 Aligned_cols=40 Identities=18% Similarity=0.394 Sum_probs=30.3
Q ss_pred EEEcCCCcEEecCCCCeEEEEEe-cccCCCeEEEEeCCCeeec
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~ 54 (61)
+...|+.. .+.+|..+.|.|.+ .|.|.|.|+|++ ||..+.
T Consensus 85 ~~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~ 125 (262)
T 3rjd_A 85 LLLQVSSR-VFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFK 125 (262)
T ss_dssp EEEEESCS-EEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEE
T ss_pred eEecCCCe-EEecCCeEEEEEEccCCCCCceEEEEE-CCcccc
Confidence 33443444 35678889999999 899999999998 777653
No 348
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.74 E-value=5.4e-05 Score=45.28 Aligned_cols=34 Identities=12% Similarity=0.199 Sum_probs=28.0
Q ss_pred EcCCCcEEecCCCCeEEEEEecccCCC-----eEEEEeC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRS 48 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~P~P-----~I~W~~~ 48 (61)
..|+..+.+..|+.++|.|.+.|.|.+ .|+|++.
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~ 43 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEME 43 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEET
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEEC
Confidence 346677777789999999999999854 9999985
No 349
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.74 E-value=3.6e-05 Score=45.91 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=30.3
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.+|.+...|.. .+..|..++|.|.|.| +.+.++|++ ||..+
T Consensus 99 ~~p~~~~~~~~--~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 139 (196)
T 3p2t_A 99 SKPTLSALPSP--LVTSGKSVTLLCQSRS-PMDTFLLCK-ERAAH 139 (196)
T ss_dssp CCCEEEEESCS--EECTTCCEEEEEEEEE-EEEEEEEEE-TTCCC
T ss_pred CCCEEEeCCcc--eecCCCeEEEEEecCC-CCCEEEEEe-CCCcc
Confidence 45677766543 3467888999999999 457999998 55543
No 350
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=97.74 E-value=2.9e-05 Score=49.62 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=33.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCC-----------CeEEEEeCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN-----------PEIIWIRSD 49 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~-----------P~I~W~~~d 49 (61)
-+.|...+..++.+.+|+.+.|.|.+.|.|. |.|+|++++
T Consensus 6 c~~~~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~ 56 (349)
T 4dep_C 6 CDDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTR 56 (349)
T ss_dssp CEEEEECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEE
T ss_pred ccccccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECC
Confidence 3467777777887889999999999998775 999999954
No 351
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.74 E-value=2e-05 Score=48.27 Aligned_cols=42 Identities=12% Similarity=0.280 Sum_probs=29.3
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CC--CeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN--PEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~--P~I~W~~~dg~~i 53 (61)
.+|.+...+... +..|..++|.|.|.|. |. |.|+|++ ||..+
T Consensus 122 ~~P~v~~~~~~~--~~~g~~v~L~C~~~g~~P~~~~~v~W~~-~~~~~ 166 (220)
T 2fbj_H 122 RNPTIYPLTLPP--ALSSDPVIIGCLIHDYFPSGTMNVTWGK-SGKDI 166 (220)
T ss_dssp BCCEEEEECCCS--SSCCSSEEEEEEEEEEBSCCCEEEEESC-CCSSC
T ss_pred CCCEEEEeeccc--ccCCCcEEEEEEEEeEECCCcEEEEEec-CCEec
Confidence 345555443222 3467789999999998 87 7999998 55543
No 352
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.74 E-value=3.6e-05 Score=47.66 Aligned_cols=38 Identities=16% Similarity=0.349 Sum_probs=30.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCC----eEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP----EIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P----~I~W~~~ 48 (61)
.|.+++.| ..+.+.+|..++|.|.+.|.|.| .|+|++.
T Consensus 133 ~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 133 ELVMTQTP-ASLAVSLGQRATISCRASENVDRYGNSFMHWYQQ 174 (253)
T ss_dssp -CCEEEEC-SEEEECTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred cceEECcC-CeEEEeCCCCEEEEEEecCccccCCCcEEEEEEE
Confidence 56777774 44567789999999999999988 9999984
No 353
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.73 E-value=3.1e-05 Score=52.74 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=27.7
Q ss_pred CcEEecCCCCeEEEEEec----ccCCCeEEEEeCCCeee
Q psy11557 19 NRIDFSNTTGAQVECTAR----GSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~----G~P~P~I~W~~~dg~~i 53 (61)
..+.+..|..+.|.|.|. |.|.|.|+|++ ||..+
T Consensus 450 ~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k-~g~~~ 487 (585)
T 2ocw_A 450 GNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNN-TGCQA 487 (585)
T ss_pred CceeEecCCcEEEEEEecCCCCCCccEEEEEee-cCcee
Confidence 445567788899999997 89999999998 66544
No 354
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.73 E-value=3.7e-05 Score=48.51 Aligned_cols=39 Identities=10% Similarity=0.319 Sum_probs=31.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccC------CCeEEEEeC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP------NPEIIWIRS 48 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P------~P~I~W~~~ 48 (61)
..+.+++.| ..+.+.+|..++|.|.+.|.| .|.|.|++.
T Consensus 4 ~~~~v~q~p-~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 48 (264)
T 2gjj_A 4 ADIVLTQTP-SSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQ 48 (264)
T ss_dssp CCCCEEEEC-SEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred cccceEecC-CeEEecCCCcEEEEeEcCCcccccccCCceEEEEEE
Confidence 346677774 555677898999999999999 799999985
No 355
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.73 E-value=3.8e-05 Score=47.00 Aligned_cols=39 Identities=21% Similarity=0.483 Sum_probs=26.5
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
|.+.+. +..+ ..+|+.++|.|. |.|.|.|+|++ ||..+.
T Consensus 115 ~~~~~~-p~~v-~~~G~~v~L~C~--g~p~p~i~W~k-~~~~l~ 153 (204)
T 1sy6_A 115 GGITQT-PYKV-SISGTTVILTCP--QYPGSEILWQH-NDKNIG 153 (204)
T ss_dssp ----CC-CCEE-EEETTEEEEECS--CCCSSCEEEEE-TTEEES
T ss_pred cceecC-Ccee-eecCCcEEEEcC--CCCCCceEEEE-CCEECC
Confidence 334443 4443 336778999999 89999999998 777664
No 356
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=97.73 E-value=9e-05 Score=41.89 Aligned_cols=43 Identities=16% Similarity=0.287 Sum_probs=29.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
.+|.....+... ...|..++|.|.|.|. |.. .|+|++ ||+.+.
T Consensus 4 ~~P~V~v~~~~~--~~~~~~~~L~C~~~gFyP~~i~v~W~k-~g~~~~ 48 (100)
T 1k5n_B 4 RTPKIQVYSRHP--AENGKSNFLNCYVSGFHPSDIEVDLLK-NGERIE 48 (100)
T ss_dssp BCCEEEEEESSC--CCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred CCCEEEEEeCCc--ccCCCcEEEEEEEEeeECCceEEEEEE-CCEECC
Confidence 456655543333 2345579999999996 544 899998 888774
No 357
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.72 E-value=3.7e-05 Score=48.93 Aligned_cols=43 Identities=21% Similarity=0.417 Sum_probs=29.9
Q ss_pred cceEEEcCCCcEE-ecCCCCeEEEEEecccC----CCeEEEEeCCCeeec
Q psy11557 10 GPIFIKEPPNRID-FSNTTGAQVECTARGSP----NPEIIWIRSDGTAVG 54 (61)
Q Consensus 10 ~P~f~~~Pp~~~~-~~~g~~v~L~C~A~G~P----~P~I~W~~~dg~~i~ 54 (61)
+++|+.. |+... +..|..++|.|.|.|.+ ..+|+|++ ||..+.
T Consensus 23 P~v~i~~-ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k-~g~~l~ 70 (240)
T 4acp_A 23 PSVFLFP-PKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVH 70 (240)
T ss_dssp CEEEEEC-CCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEE-TTEEEC
T ss_pred CEEEEEC-cChHHhcccCCCcEEEEEEeccccCCCccEEEEEE-CCcccC
Confidence 3345544 55444 44577899999999974 23799998 777663
No 358
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=97.72 E-value=1.8e-05 Score=50.74 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=27.0
Q ss_pred EEecCCCCeEEEEEeccc-----CCCeEEEEeCCCeee
Q psy11557 21 IDFSNTTGAQVECTARGS-----PNPEIIWIRSDGTAV 53 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~-----P~P~I~W~~~dg~~i 53 (61)
..+..|+.++|.|.|.|+ |.|.|.|++ ||..|
T Consensus 10 ~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~-~g~~l 46 (313)
T 2d9q_B 10 PIVHLGDPITASCIIKQNCSHLDPEPQILWRL-GAELQ 46 (313)
T ss_dssp SEECTTCCEEEEECCCTTSCSSCSCSCCEEES-SSCBC
T ss_pred cEEcCCCCEEEEEEECCCCCCCCcccceEEEe-CCEEC
Confidence 346788899999999998 789999998 77665
No 359
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=97.72 E-value=1.2e-05 Score=49.74 Aligned_cols=29 Identities=14% Similarity=0.251 Sum_probs=24.4
Q ss_pred EEecCCCCeEEEE---EecccCCCeEEEEeCCC
Q psy11557 21 IDFSNTTGAQVEC---TARGSPNPEIIWIRSDG 50 (61)
Q Consensus 21 ~~~~~g~~v~L~C---~A~G~P~P~I~W~~~dg 50 (61)
+....|+.++|+| .+.|.|.|.|+|++ +|
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k-~g 34 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFK-LG 34 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEE-EE
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEE-cC
Confidence 4556788999999 57899999999998 44
No 360
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.71 E-value=2.2e-05 Score=48.63 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=33.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCe-EEEEeCCCeeec
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVG 54 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~-I~W~~~dg~~i~ 54 (61)
|+..+ ..+.+..|+.+.|.|.+.|.|.|. |+|++.||..+.
T Consensus 92 ~~~~~-~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~ 133 (289)
T 3ejj_X 92 WNLLA-QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVL 133 (289)
T ss_dssp EEESC-SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECC
T ss_pred eeccc-ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecC
Confidence 56664 556677888999999999998876 999987887764
No 361
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=97.71 E-value=3.3e-05 Score=46.86 Aligned_cols=42 Identities=19% Similarity=0.446 Sum_probs=28.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCC-C-eEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPN-P-EIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~-P-~I~W~~~dg~~i 53 (61)
..|.+...++... ..|..++|.|.|.| .|. | .|+|++ ||..+
T Consensus 123 ~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~-~g~~~ 167 (221)
T 3m8o_H 123 TSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSE-SGQGV 167 (221)
T ss_dssp BCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESC-CSTTC
T ss_pred CCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEE-CCEEC
Confidence 4455542223332 46778999999999 887 4 999997 77654
No 362
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=97.71 E-value=1.6e-05 Score=48.52 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=24.6
Q ss_pred ecCCCCeEEEEEecccCC---CeEEEEeCCCeeec
Q psy11557 23 FSNTTGAQVECTARGSPN---PEIIWIRSDGTAVG 54 (61)
Q Consensus 23 ~~~g~~v~L~C~A~G~P~---P~I~W~~~dg~~i~ 54 (61)
+..|..++|.|.|.|.|+ ++|+|++ ||..|.
T Consensus 103 ~~~G~~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~ 136 (202)
T 1vca_A 103 LEAGKPITVKCSVADVYPFDRLEIDLLK-GDHLMK 136 (202)
T ss_dssp EETTSCEEEEEEEEEEBSGGGEEEEEEE-TTEEEE
T ss_pred EcCCCCEEEEEEECCcCCCCCeEEEEEe-CCeECc
Confidence 457888999999999753 4899998 776653
No 363
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.71 E-value=2.9e-05 Score=49.01 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=29.7
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.++..|+ .+.+.+|+.++|.|.+.|.| .|.|+|++.+
T Consensus 135 ~~~~~~p~-~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 174 (276)
T 3auv_A 135 EVQLVESG-GGLVQPGGSLRLSCAASGFTISDYWIHWVRQA 174 (276)
T ss_dssp CCEEEEEC-CEEECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred ceEEECCC-ceEecCCCeEEEEEEecCccCCCCEEEEEEcC
Confidence 34555544 45677888999999999988 6999999853
No 364
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.87 E-value=5.3e-06 Score=46.61 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=28.3
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
++. |..+.+.+|..++|.|.+.+.|.+.|.|++.+
T Consensus 3 ~Q~-p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 37 (110)
T 1u3h_A 3 RQS-PQSLTVWEGETAILNCSYENSAFDYFPWYQQF 37 (110)
Confidence 344 44556778889999999999999999999853
No 365
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.69 E-value=4.3e-05 Score=46.54 Aligned_cols=37 Identities=14% Similarity=0.316 Sum_probs=28.9
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCC--CeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~--P~I~W~~~ 48 (61)
+.++..|.. ..+.+|..++|.|.+.|.|. |.|+|++.
T Consensus 120 ~~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 120 EVQLQQSGA-ELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp CCEEEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred eEEEeCCCc-eEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 346666554 45678889999999999984 69999985
No 366
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=97.69 E-value=3e-05 Score=46.45 Aligned_cols=26 Identities=12% Similarity=0.224 Sum_probs=22.7
Q ss_pred eEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 29 AQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 29 v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
..|.|.|.|.|.|+|+|++ ||..+..
T Consensus 108 ~~L~C~~~~~p~p~i~W~~-~~~~l~~ 133 (171)
T 1ccz_A 108 ATLTCEVLEGTDVELKLYQ-GKEHLRS 133 (171)
T ss_dssp TEEEEECSSCSSCEEEEEE-TTEEEEE
T ss_pred cEEEEEeCCCCCcEEEEEE-CCEECcC
Confidence 5899999999999999998 8877643
No 367
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=97.69 E-value=3.5e-05 Score=43.03 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=28.4
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC----CCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P----~P~I~W~~~ 48 (61)
+++. |..+.+.+|..++|.|.+.+.+ .+.|.|++.
T Consensus 4 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (111)
T 1j05_L 4 LTQS-PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQ 42 (111)
T ss_dssp EEEE-CSEEECCTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred EEEe-CCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEe
Confidence 4455 4556678899999999999988 689999985
No 368
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.69 E-value=6.8e-05 Score=42.39 Aligned_cols=35 Identities=14% Similarity=0.351 Sum_probs=28.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+++. |..+.+.+|..++|.|.+.+.+ .+.|.|++.
T Consensus 3 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (113)
T 1sq2_N 3 VDQT-PRSVTKETGESLTINCVLRDASYALGSTCWYRK 39 (113)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEECSCSSCCCCEEEEEE
T ss_pred eEeC-CccEEEecCCCEEEEEEECCCcCCCCEEEEEEe
Confidence 4555 4556678899999999999987 689999985
No 369
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.69 E-value=6.6e-05 Score=47.72 Aligned_cols=46 Identities=20% Similarity=0.501 Sum_probs=33.0
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
...+|.+...++..... .|..++|.|.|.| +|.+ .|+|++ ||..+.
T Consensus 127 ~~~~P~V~v~~~~~~~~-~g~~~~L~C~~~gf~P~~i~v~W~k-~g~~~~ 174 (240)
T 4acp_A 127 QPREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 174 (240)
T ss_dssp CCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCCCCEEEEECCChHHh-cCCceEEEEEEeEEeCCCcEEEEEE-CCEECC
Confidence 34567777666654333 3667999999999 6765 899998 777654
No 370
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.68 E-value=1.8e-05 Score=47.57 Aligned_cols=34 Identities=18% Similarity=0.453 Sum_probs=28.1
Q ss_pred CCCcEEecCCCCeEEEEEecccCC-CeEEEEeCCC
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDG 50 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P~-P~I~W~~~dg 50 (61)
.|..+.+..|+.+.|.|.+.|.|. |.|+|++.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~ 40 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDR 40 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECT
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCC
Confidence 355666778889999999999995 9999998543
No 371
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.68 E-value=3.4e-05 Score=47.53 Aligned_cols=42 Identities=17% Similarity=0.376 Sum_probs=25.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
..|.+...++... +..|..++|.|.|.|. |.| +|+|++ ||..
T Consensus 120 ~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 163 (227)
T 1mju_H 120 TAPSVYPLAPVCG-DTSGSSVTLGCLVKGYFPEPVTLTWNS-GSLS 163 (227)
T ss_dssp BCCEEEEECCCC-------CEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred CCCEEEEecCCcc-ccCCCcEEEEEEeecEeCCCeEEEEec-CCCc
Confidence 3454443333332 3457789999999996 888 999998 5554
No 372
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.68 E-value=6e-05 Score=51.83 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=32.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
.+|.+...|+....+..|..++|.|.|.|.+++ .|+|++ ||..+.
T Consensus 295 ~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~ 341 (512)
T 1zvo_C 295 QPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEV-AGKVPT 341 (512)
T ss_pred CCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEE-CCEecc
Confidence 456655555554445568889999999997444 999998 666554
No 373
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.68 E-value=3.9e-05 Score=45.78 Aligned_cols=37 Identities=14% Similarity=0.302 Sum_probs=28.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc-------CCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS-------PNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~-------P~P~I~W~~~d 49 (61)
|..+.|..+.+.+|+.++|.|.+.+. |.+.|.|++.+
T Consensus 2 ~~~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~ 45 (214)
T 2zg1_A 2 YELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDG 45 (214)
T ss_dssp CEEECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETT
T ss_pred ceeeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecC
Confidence 33344566677889899999999975 68999999854
No 374
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=97.68 E-value=9.6e-05 Score=47.11 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=23.0
Q ss_pred CCCCeEEEEEeccc-CC----CeEEEEeCCCeeecC
Q psy11557 25 NTTGAQVECTARGS-PN----PEIIWIRSDGTAVGD 55 (61)
Q Consensus 25 ~g~~v~L~C~A~G~-P~----P~I~W~~~dg~~i~~ 55 (61)
.|..+ |.|.|.|. |. |+|+|++ ||.+|..
T Consensus 109 ~g~~~-l~C~a~g~~P~~~~~lti~Wlk-~~~~L~~ 142 (210)
T 1gsm_A 109 PGDPE-VACTAHKVTPVDPNALSFSLLV-GGQELEG 142 (210)
T ss_dssp TTCCE-EEEEEEEEBCCCTTTEEEEEEE-TTEECTT
T ss_pred eCCce-EEEEeCCCCCCCCCCcEEEEEE-CCEEccc
Confidence 45567 99999996 74 4999998 8888753
No 375
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.66 E-value=3.4e-05 Score=47.19 Aligned_cols=27 Identities=26% Similarity=0.688 Sum_probs=23.1
Q ss_pred cCCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 24 SNTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 24 ~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.+|+.++|.|.| |.|.|+|++ ||..+.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k-~g~~l~ 42 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFK-DGKMIG 42 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEE-TTEEEE
T ss_pred cCCCeEEEEEcC---CCCEEEEEE-CCEECC
Confidence 467789999999 899999998 887764
No 376
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.66 E-value=0.00016 Score=45.67 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=33.6
Q ss_pred CCCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 7 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 7 ~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
...+|.|..+|.. + +..|+.++|.|.+.+ +.+.++|+| ||..+
T Consensus 4 ~~~kP~i~~~P~~-~-v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~ 46 (242)
T 1p6f_A 4 TLPKPFIWAEPHF-M-VPKEKQVTICCQGNY-GAVEYQLHF-EGSLF 46 (242)
T ss_dssp CCCCCEEEEESCS-E-EETTCCEEEEEECCT-TCCEEEEEE-TTEEE
T ss_pred CCCCCEEEeeCCC-c-cCCCCcEEEEEeeCC-CCcEEEEEE-CCCcc
Confidence 3567899999765 3 567888999999987 467999998 66554
No 377
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.65 E-value=5.5e-05 Score=46.44 Aligned_cols=38 Identities=8% Similarity=0.333 Sum_probs=28.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
++.++..|+.. .+.+|..++|.|.+.|.| .|.|.|++.
T Consensus 131 ~~~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 131 SEVQLQQSGPE-LVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp ----CEECCCE-EECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred cceEEecCCce-EEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 44566665554 467888999999999988 899999985
No 378
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=97.65 E-value=0.00016 Score=41.43 Aligned_cols=37 Identities=24% Similarity=0.323 Sum_probs=28.8
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCC---CeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~---P~I~W~~~d 49 (61)
.+..|+..+....|+.++|.|.+.+.+. +.|+|++.+
T Consensus 8 ~V~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~ 47 (139)
T 1pko_A 8 RVIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSP 47 (139)
T ss_dssp EEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC-
T ss_pred EEECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECC
Confidence 3455666677788999999999998764 899999965
No 379
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.65 E-value=3e-05 Score=46.53 Aligned_cols=26 Identities=19% Similarity=0.613 Sum_probs=23.3
Q ss_pred CCCCeEEEEEecccCCCeEEEEeCCCeeec
Q psy11557 25 NTTGAQVECTARGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 25 ~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~ 54 (61)
.|..++|.|.| |.|+|+|++ ||..|.
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k-~g~~i~ 146 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLK-DGSIIS 146 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEE-TTEECC
T ss_pred CCCeEEEEeeC---CCCeEEEEE-CCEECc
Confidence 78789999999 999999998 888875
No 380
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=97.63 E-value=3.9e-05 Score=46.91 Aligned_cols=26 Identities=19% Similarity=0.497 Sum_probs=23.0
Q ss_pred CCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 27 TGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 27 ~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..++|.|.|.|.|.|+|+|++ ||..+
T Consensus 116 ~~v~L~C~~~~~p~~~~~W~~-~g~~l 141 (182)
T 1hnf_A 116 INTTLTCEVMNGTDPELNLYQ-DGKHL 141 (182)
T ss_dssp TTTEEEEECSSCSSCEEEEEE-SSCEE
T ss_pred CcEEEEeEccCCCCCEEEEEE-CCEEC
Confidence 369999999999999999998 77665
No 381
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.63 E-value=5.8e-05 Score=45.01 Aligned_cols=27 Identities=19% Similarity=0.503 Sum_probs=22.8
Q ss_pred ecCCCCeEEEEEeccc----CCCeEEEEeCC
Q psy11557 23 FSNTTGAQVECTARGS----PNPEIIWIRSD 49 (61)
Q Consensus 23 ~~~g~~v~L~C~A~G~----P~P~I~W~~~d 49 (61)
+.+|..++|.|.|.|. |.|.|+|++++
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~ 165 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNA 165 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESST
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCC
Confidence 3468889999999985 99999999844
No 382
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.62 E-value=4.1e-05 Score=45.93 Aligned_cols=34 Identities=12% Similarity=0.427 Sum_probs=25.9
Q ss_pred CCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeeecC
Q psy11557 18 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i~~ 55 (61)
+-.+. ..|+.++|.|.+.| |.+ |+|++ ||..|..
T Consensus 7 ~~~v~-~~G~~v~L~C~~~~-~~~-i~W~k-~g~~l~~ 40 (186)
T 1jbj_A 7 EYKVS-ISGTSVELTCPLDS-DEN-LKWEK-NGQELPQ 40 (186)
T ss_dssp CCEEE-EETTEEEEECSSCC-CTT-CEEEE-TTEEECS
T ss_pred EEEEE-eCCcEEEEEEeCCC-CCc-eEEEE-CCEECCC
Confidence 34444 45778999999999 554 99998 8887754
No 383
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.62 E-value=2.9e-05 Score=48.13 Aligned_cols=40 Identities=13% Similarity=0.204 Sum_probs=30.8
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCC--CeEEEEeCCCeeec
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSDGTAVG 54 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~--P~I~W~~~dg~~i~ 54 (61)
|...+ ..+.+.+|..++|.|.+.| |. |.|+|++++|..+.
T Consensus 92 ~~~~~-~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~ 133 (292)
T 4dkd_C 92 WNVLA-QEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLM 133 (292)
T ss_dssp EEESC-SEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCC
T ss_pred ccccC-CeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccc
Confidence 45553 4556678889999999999 65 88999997777654
No 384
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.62 E-value=9e-05 Score=45.86 Aligned_cols=34 Identities=15% Similarity=0.407 Sum_probs=27.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEe
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIR 47 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~ 47 (61)
++++|. .+.+.+|+.++|.|.+.|.+ .|.|.|++
T Consensus 4 ~~~~p~-~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r 39 (253)
T 3uzq_A 4 LLEQSG-AELVKPGASVRLSCTASGFNIKDTYMSWVK 39 (253)
T ss_dssp CEEECC-CEEECTTCCEEEEEEECSSCGGGSCEEEEE
T ss_pred eEecCC-CeeecCCCcEEEEEEeeCCcccCceEEEEE
Confidence 456644 45678899999999999965 89999998
No 385
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.61 E-value=0.0001 Score=45.57 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=29.8
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
..+++.+++|+... +.+|+.++|.|.+.|. |.+.|.|++.
T Consensus 6 ~~~~v~~~~p~~~~-v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 47 (257)
T 3gkz_A 6 DDKEVQLQESGPSL-VKPSQTLSLTCSVTGDSVTSGYWSWIRQ 47 (257)
T ss_dssp ---CEEEEEECCSE-ECTTCCEEEEEEEEESCCSSCEEEEEEE
T ss_pred CCccEEEECCCCeE-EcCCCcEEEEEEEEcccccceEEEEEEE
Confidence 34556667766554 6789899999999994 5899999984
No 386
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=97.61 E-value=6.1e-05 Score=42.30 Aligned_cols=36 Identities=17% Similarity=0.422 Sum_probs=28.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC------CCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP------NPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P------~P~I~W~~~d 49 (61)
+++. |..+.+.+|..++|.|.+.+.+ .+.|.|++.+
T Consensus 4 v~q~-p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~ 45 (114)
T 1eeq_A 4 LTQS-PDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQK 45 (114)
T ss_dssp EEEE-CSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEEC
T ss_pred eEec-CCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEEC
Confidence 4455 4556678899999999999988 3899999853
No 387
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=97.61 E-value=0.00015 Score=42.28 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=31.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
.++.+++.|.. +...+|..++|.|.+.+.....|.|++-
T Consensus 3 ~~~~v~Q~p~~-~~v~~G~~vtL~C~~s~~~~~~v~WyrQ 41 (128)
T 1nez_G 3 QAPELRIFPKK-MDAELGQKVDLVCEVLGSVSQGCSWLFQ 41 (128)
T ss_dssp -CCEEEEESSC-EEECTTCCEEEEEEEESCCSSCEEEEEE
T ss_pred cCCeeEECCCe-EEEcCCCCEEEEEEeCccCCCcEEEEEe
Confidence 46778888665 4578898999999999887789999984
No 388
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=97.61 E-value=0.0002 Score=40.26 Aligned_cols=29 Identities=17% Similarity=0.388 Sum_probs=23.3
Q ss_pred CCCCeEEEEEeccc-CCC-eEEEEeCCCeeec
Q psy11557 25 NTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 25 ~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i~ 54 (61)
.|..++|.|.|.|. |.. +|+|++ ||..+.
T Consensus 17 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 47 (97)
T 3gbl_A 17 YGKENTLICYVSGFHPPDISIELLK-NGEVIA 47 (97)
T ss_dssp TTCCEEEEEEEECCBSSCEEEEEEE-TTEECT
T ss_pred CCCcEEEEEEEcceeCCccEEEEEE-CCccCc
Confidence 35569999999996 554 899998 888764
No 389
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.59 E-value=7.7e-05 Score=41.60 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=27.9
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+++. |..+.+.+|+.++|.|.+.|.+ .+.|.|++.
T Consensus 3 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (108)
T 2coq_A 3 VDQT-PRIATKETGESLTINCVLRDTACALDSTNWYRT 39 (108)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEECCSSEEEEEEEEEEE
T ss_pred eEeC-CceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEc
Confidence 4555 4555677899999999999874 789999985
No 390
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.59 E-value=4.9e-05 Score=49.13 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=26.1
Q ss_pred EEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 21 IDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
+.+.+|+.++|.|.+.|.|.|.|+|++++.
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~ 33 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQ 33 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSCCEEEEETTC
T ss_pred EEEeCCCeEEEEEEecCCCceEEEEEeCCc
Confidence 456678899999999999999999999554
No 391
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.59 E-value=5.5e-05 Score=46.93 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=29.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
.|.|... +..+.+.+|+.++|.|.+.|. |.|.|.|++.
T Consensus 6 ~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 45 (256)
T 3juy_B 6 HQVQLVQ-SGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQ 45 (256)
T ss_dssp -CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceEEEEe-cCCceecCCCeEEEEEEeecccccCceEEEEEE
Confidence 4455555 566678889999999999994 7899999973
No 392
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=97.59 E-value=9e-05 Score=41.07 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=28.6
Q ss_pred CCCcEEecCCCCeEEEEEe-cccCCCeEEEEeCCCe
Q psy11557 17 PPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGT 51 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~ 51 (61)
++..+....|..++|.|.. .+.+.+.|.|++.+|.
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~ 44 (110)
T 2ptt_A 9 SIPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQ 44 (110)
T ss_dssp CCCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTB
T ss_pred CCCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCc
Confidence 3445667789899999999 8889999999996555
No 393
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.58 E-value=0.00011 Score=45.19 Aligned_cols=35 Identities=20% Similarity=0.416 Sum_probs=28.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+++|+ .+.+..|+.++|.|.+.|.| .+.|+|++.+
T Consensus 4 l~qp~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (227)
T 1mju_H 4 LQQPG-AELVKPGASVKLSCKASGYTFTNYWINWVKQR 40 (227)
T ss_dssp EECCS-EEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EcCCC-CeEEcCCCCEEEEEEecCCccccceEEEEEeC
Confidence 45544 55678899999999999998 8999999864
No 394
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.57 E-value=6.5e-05 Score=48.00 Aligned_cols=38 Identities=13% Similarity=0.327 Sum_probs=29.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCC------eEEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNP------EIIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P------~I~W~~~d 49 (61)
+.+.+. +..+.+.+|+.++|.|.+.|.|.| .|+|++.+
T Consensus 160 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~ 203 (291)
T 2gki_A 160 LVMSQS-PSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQK 203 (291)
T ss_dssp CCEECS-CSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEEC
T ss_pred ceEEcC-CCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEEC
Confidence 344444 455567789899999999999987 99999953
No 395
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.57 E-value=6.9e-05 Score=46.96 Aligned_cols=34 Identities=12% Similarity=0.327 Sum_probs=27.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+++|+. +.+.+|..++|.|.+.|.| .|.|+|++.
T Consensus 4 l~~p~~-~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~ 39 (256)
T 1nqb_A 4 LQQSGA-ELVKPGASVKLSCKASGYTFTSYWMHWVKQ 39 (256)
T ss_dssp EEECCC-EEECTTCCEEEEEEECSSCGGGSCEEEEEE
T ss_pred EECCCC-eeecCCCcEEEEEEeccccCCCceEEEEEE
Confidence 455544 5677898999999999996 789999985
No 396
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.57 E-value=0.00011 Score=44.05 Aligned_cols=38 Identities=18% Similarity=0.406 Sum_probs=30.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+.+++. +..+.+.+|..++|.|.+.+.+.+.|.|++.+
T Consensus 17 ~~v~q~-p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~ 54 (146)
T 2yc1_B 17 IVLTQS-PATLSVSPGERATLSCRASQSVRSYLAWYQQK 54 (146)
T ss_dssp CCEEEE-CSEEEECTTSCEEEEEEESSCCTTCEEEEEEC
T ss_pred ceEEEe-CCEEEEecCCCEEEEEEECCCCCCEEEEEEEC
Confidence 445565 45566788999999999999999999999853
No 397
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.56 E-value=9.5e-05 Score=49.13 Aligned_cols=45 Identities=13% Similarity=0.296 Sum_probs=32.1
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCCCeeec
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSDGTAVG 54 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~dg~~i~ 54 (61)
..+|.+...++.... ..|..++|.|.|.|.+ .++|+|++ ||..+.
T Consensus 272 ~~~P~v~v~~~~~~~-~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~~~ 318 (376)
T 2aty_A 272 PKAPQLYTIPPPKEQ-MAKDKVSLTCMITDFFPEDITVEWQW-NGQPAE 318 (376)
T ss_pred CcCCeEEeeCCCHHH-hcCCceEEEEEEEEeECCCcEEEEEE-CCEECC
Confidence 456777766555432 3466799999999963 56899998 777653
No 398
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.56 E-value=0.00012 Score=44.83 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=28.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
+.+++. +..+.+..|+.++|.| +.|.|.+.|+|++
T Consensus 3 ~~v~~~-p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r 37 (245)
T 4ei6_B 3 PKVLQI-PSHQIIDMGQMVTLNC-DPVSNHLYFYWYK 37 (245)
T ss_dssp CCCEEE-CSEEEEETTCCEEEEE-ECCTTCCEEEEEE
T ss_pred cceEeC-CceEEecCCCCEEEEE-EcCCCCCEEEEEE
Confidence 456666 4555677898999999 8899999999998
No 399
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=97.56 E-value=6.1e-05 Score=47.30 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=25.6
Q ss_pred CCcEEecCCCCeEEEEEe-cccCCCeEEEEeCCCeee
Q psy11557 18 PNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A-~G~P~P~I~W~~~dg~~i 53 (61)
+..+....+..+.|.|.+ .|+|.|.|+|++ ||..+
T Consensus 121 ~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~-~~~~~ 156 (308)
T 4fom_A 121 PDSLIDGGNETVAAICIAATGKPVAHIDWEG-DLGEM 156 (308)
T ss_dssp SSCCCTTCSCEEEEEEEEEEEBSCCEEEECC-CSSBC
T ss_pred cceeEEcCCceEEEEEEecCCcCCceEEEEE-CCccc
Confidence 333344556679999974 799999999998 55544
No 400
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.56 E-value=8.7e-05 Score=47.92 Aligned_cols=35 Identities=14% Similarity=0.417 Sum_probs=27.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.+|+. +.+..|+.++|.|.+.|.+ .|.|+|++.+
T Consensus 4 l~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 40 (344)
T 1za6_B 4 LVQSGA-EVVKPGASVKISCKASGYTFTDHAIHWVKQN 40 (344)
T ss_dssp EEECCC-EEECTTCCEEEEEEEESSCTTSSCEEEEEEC
T ss_pred eeCCCC-eEEeCCCcEEEEEEcCCccccccEEEEEEEC
Confidence 455444 5677898999999999984 7899999853
No 401
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.56 E-value=7.7e-05 Score=44.98 Aligned_cols=27 Identities=15% Similarity=0.345 Sum_probs=22.2
Q ss_pred CCCeEEEEEe-cccCCCeEEEEeCCCeeec
Q psy11557 26 TTGAQVECTA-RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 26 g~~v~L~C~A-~G~P~P~I~W~~~dg~~i~ 54 (61)
+..++|.|.| .| |.|+|+|++ ||..+.
T Consensus 115 ~~~v~L~C~~~~g-p~p~i~W~~-~~~~l~ 142 (180)
T 2dru_A 115 CSNATLTCEVLEG-TDVELKLYQ-GKEHLR 142 (180)
T ss_dssp GGGTEEEEECSSC-TTCEEEEEE-TTEEEE
T ss_pred CCCEEEEEEeCCC-CCCEEEEEE-CCeECc
Confidence 3469999999 77 999999998 666653
No 402
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.56 E-value=4e-05 Score=47.53 Aligned_cols=30 Identities=13% Similarity=0.303 Sum_probs=23.4
Q ss_pred cCCCCeEEEEEeccc-CC-CeEEEEeCCCeee
Q psy11557 24 SNTTGAQVECTARGS-PN-PEIIWIRSDGTAV 53 (61)
Q Consensus 24 ~~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i 53 (61)
..|..++|.|.|.|. |. |.|+|+++++..+
T Consensus 145 ~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l 176 (242)
T 1hxm_B 145 KLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTI 176 (242)
T ss_dssp GSSSCEEEEEEEEEESSCCEEEEEEESSSCCC
T ss_pred ccCCCceEEEEEeeEECCCeEEEEEcCCCEee
Confidence 357789999999997 75 7999999544244
No 403
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.56 E-value=7.2e-05 Score=42.93 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=29.1
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccC----CCeEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P----~P~I~W~~~ 48 (61)
.+++. |..+.+.+|..++|.|.+.+.+ .+.|.|++.
T Consensus 3 ~v~q~-p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (126)
T 4ffy_L 3 VLTQS-PASLAVSLGQRATISCRASESVDHYGNSFIYWYQQ 42 (126)
T ss_dssp CEEEE-CSEEEEETTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred cEEeC-CCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEE
Confidence 45555 4556677899999999999998 788999985
No 404
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.56 E-value=5e-05 Score=47.73 Aligned_cols=32 Identities=13% Similarity=0.352 Sum_probs=27.4
Q ss_pred EecCCCCeEEEEEe------cccCCCeEEEEeCCCeeec
Q psy11557 22 DFSNTTGAQVECTA------RGSPNPEIIWIRSDGTAVG 54 (61)
Q Consensus 22 ~~~~g~~v~L~C~A------~G~P~P~I~W~~~dg~~i~ 54 (61)
.+..|..+.|.|.+ .|+|.|.|+|++ ||..+.
T Consensus 114 ~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~ 151 (315)
T 1itb_B 114 KLPVAGDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLL 151 (315)
T ss_dssp EEETTSCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECC
T ss_pred EEecCCCeEEEEecccccccCCCCCCEEEEEE-CCEECC
Confidence 45578889999999 999999999998 777763
No 405
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.55 E-value=0.00011 Score=45.30 Aligned_cols=34 Identities=18% Similarity=0.437 Sum_probs=26.9
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+..++... +.+|..++|.|.+.|.| .|.|+|++.
T Consensus 138 ~~~~~~~~-v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 138 LVESGGGL-VQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp EEEECCEE-ECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEcCCCeE-EcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 33434443 67888999999999988 899999985
No 406
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=97.55 E-value=0.00014 Score=41.08 Aligned_cols=36 Identities=11% Similarity=0.451 Sum_probs=28.3
Q ss_pred EcCCCcEEecCCCCeEEEEEec---ccCCCeEEEEeCCC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTAR---GSPNPEIIWIRSDG 50 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~---G~P~P~I~W~~~dg 50 (61)
..++..+....|+.++|.|.+. +.+.+.|.|++.+.
T Consensus 8 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~ 46 (135)
T 1xt5_A 8 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGAS 46 (135)
T ss_dssp ECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESS
T ss_pred eCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCC
Confidence 3445666777899999999975 47899999999643
No 407
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.55 E-value=1.9e-05 Score=48.90 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=24.5
Q ss_pred CCCCeEEEEEeccc-CC-CeEEEEeCCCeeec
Q psy11557 25 NTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 54 (61)
Q Consensus 25 ~g~~v~L~C~A~G~-P~-P~I~W~~~dg~~i~ 54 (61)
.|..++|.|.|.|. |. ++|+|++.||..|.
T Consensus 144 ~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~ 175 (230)
T 1ypz_F 144 LHKTGTYLCLLEAFFPDVIRVYWKEKDGNTIL 175 (230)
T ss_dssp HHSCEEEEEEEEEESSCCCEEEEECTTSSCBC
T ss_pred cCCcceEEEEEeeecCCCeEEEEEccCCeEcc
Confidence 35679999999997 86 69999987887663
No 408
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.55 E-value=0.00013 Score=40.86 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=28.4
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC-----CCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 49 (61)
+++. |..+...+|..++|.|.+++.+ .+.|.|++..
T Consensus 4 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~ 44 (113)
T 1dlf_L 4 MTQT-PLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQK 44 (113)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred EEEe-CCEEEEcCCCCEEEEEEccccccccCCCceEEEEEEC
Confidence 4455 4556678899999999999987 5899999853
No 409
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} SCOP: b.1.1.0 PDB: 3p77_B* 4g43_B 4g42_B 4e0r_B 3bev_B 3bew_B 3jvg_C* 2yez_B 2yf5_B 2yf6_B 2yf1_B*
Probab=97.55 E-value=0.00026 Score=39.96 Aligned_cols=43 Identities=26% Similarity=0.319 Sum_probs=28.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
.+|.....++... ..|..++|.|.|.|.-++ +|+|++ ||..+.
T Consensus 3 v~P~V~v~~~~~~--~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 47 (99)
T 3p73_B 3 LTPKVQVYSRFPA--SAGTKNVLNCFAAGFHPPKISITLMK-DGVPME 47 (99)
T ss_dssp CCCEEEEEESSCC--CTTSCEEEEEEEEEESSSCCEEEEEE-TTEECT
T ss_pred CCCEEEEEeCCcc--cCCCCEEEEEEEeeeECCCeEEEEEE-CCeeCC
Confidence 4565444323322 235569999999996443 899998 887763
No 410
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.54 E-value=0.00013 Score=40.74 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=28.4
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
++. |..+.+.+|..++|.|.+.+.+.+.|.|++.+
T Consensus 4 ~q~-p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~ 38 (112)
T 2z35_A 4 TQT-GGQVALSEEDFLTIHCNYSASGYPALFWYVQY 38 (112)
T ss_dssp ECS-CSEEEEETTCCEEECCEEECSSCCEEEEEEEC
T ss_pred EeC-CCcEEEcCCCCEEEEEEECCCCCCeEEEEEEC
Confidence 344 45566778999999999999888999999853
No 411
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.54 E-value=3.9e-05 Score=47.82 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=26.6
Q ss_pred EcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
.+|+.. .+.+|..++|.|.+.|.| .|.|+|++.
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 39 (257)
T 1f3r_B 5 LESGPG-LVRPSETLSLTCTVSGFSLTSFSVSWVRH 39 (257)
T ss_dssp EEECCS-EECTTSEEEEEEEEESSCTTTSCCEEEEE
T ss_pred ECCCCc-cccCCceEEEEEEEecccCCCccEEEEEe
Confidence 444444 467888999999999996 899999985
No 412
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.54 E-value=0.00014 Score=45.23 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=29.1
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
.+|.+++.| ..+.+..|..++|.|.+.|. .|.|+|++.
T Consensus 136 ~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~ 173 (256)
T 3tf7_C 136 SEAAVTQSP-RNKVTVTGENVTLSCRQTNS-HNYMYWYRQ 173 (256)
T ss_dssp --CCEEESC-SEEEEETTCCEEECEEECSC-CSEEEEEEE
T ss_pred CccEEEecC-CEEEEeCCCcEEEEEEcCCC-ceEEEEEEE
Confidence 456777774 44556678899999999998 899999983
No 413
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.54 E-value=0.00012 Score=46.34 Aligned_cols=37 Identities=19% Similarity=0.407 Sum_probs=29.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
.++++|+. +.+.+|+.++|.|.+.|.| .|.|.|++.+
T Consensus 28 ~~~~~p~~-~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~ 66 (282)
T 1qok_A 28 VKLQQSGA-ELVRSGTSVKLSCTASGFNIKDSYMHWLRQG 66 (282)
T ss_dssp CEEEECCC-EEEETTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EEEECCCC-EEEeCCCeEEEEEeccCCCCCCceEEEEEeC
Confidence 45667554 4567888999999999996 7999999854
No 414
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=97.54 E-value=0.00016 Score=49.53 Aligned_cols=26 Identities=23% Similarity=0.492 Sum_probs=22.1
Q ss_pred eEEEEEecc-cCCCeEEEEeCCCeeecC
Q psy11557 29 AQVECTARG-SPNPEIIWIRSDGTAVGD 55 (61)
Q Consensus 29 v~L~C~A~G-~P~P~I~W~~~dg~~i~~ 55 (61)
+.|.|.|.| .|.|+|+|++ ||.++..
T Consensus 490 ~~l~C~~~~~~P~~~i~W~~-~g~~l~~ 516 (581)
T 3o3u_N 490 KVGTCVSEGSYPAGTLSWHL-DGKPLVP 516 (581)
T ss_dssp EEEEEEEEEEBSCCEEEEEE-TTEECCT
T ss_pred eEEEEECCCCCCCCeEEEEE-CCEECCC
Confidence 567999999 5999999998 8887754
No 415
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=97.53 E-value=7.2e-05 Score=44.31 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=24.4
Q ss_pred CCCCeEEEEEeccc-CCCeEEEEeCCCeeecCC
Q psy11557 25 NTTGAQVECTARGS-PNPEIIWIRSDGTAVGDV 56 (61)
Q Consensus 25 ~g~~v~L~C~A~G~-P~P~I~W~~~dg~~i~~~ 56 (61)
.+.++.|.|.+.|. |.|.|+|++ ||..+...
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~-~g~~i~~~ 47 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSH-NGSAIRYS 47 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEE-TTEECCCC
T ss_pred cCceEEEEEEEeccCCCceEEEEE-CCEEccCC
Confidence 45568899999995 599999998 78777543
No 416
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.52 E-value=6.6e-05 Score=49.78 Aligned_cols=41 Identities=17% Similarity=0.434 Sum_probs=28.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
+|.+...++... ...|..++|.|.|.|. |.| .|+|++ ||..
T Consensus 119 ~P~i~~~~~~~~-~~~G~~v~L~C~~~g~~P~p~~v~W~k-~~~~ 161 (434)
T 1igy_B 119 PPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 161 (434)
T ss_dssp CCCEEEECCCCC-CCCTTEEEEEEEEEEEBSSCCEEEETT-TTBC
T ss_pred CCeEEEcCCccc-cCCCCcEEEEEEEeeecCCCeEEEEee-CCcC
Confidence 454443333332 3567789999999997 887 999987 5553
No 417
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.51 E-value=0.00014 Score=46.36 Aligned_cols=35 Identities=11% Similarity=0.308 Sum_probs=28.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
.+++|+ .+.+.+|+.++|.|.+.|.| .|.|.|++.
T Consensus 25 ~v~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 61 (291)
T 2gki_A 25 QLQQSG-PELVKPGASVKMSCKASGYTFTSYVMHWVKQ 61 (291)
T ss_dssp EEEECC-CEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEcCC-cEEecCCCCEEEEEeccCCcccccEEEEEEE
Confidence 445555 46678899999999999998 799999985
No 418
>3c5j_A HLA class II histocompatibility antigen, DR alpha; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 1d5x_A* 1d5z_A* 1d6e_A* 1d5m_A 1fyt_A* 1hqr_A 1j8h_A* 1r5i_A 1seb_A 1zgl_A 2seb_A* 1fv1_A* 2ipk_A* 3pdo_A 3pgc_A 3pgd_A 1ymm_A* 1aqd_A 2g9h_A* 1h15_A ...
Probab=97.50 E-value=0.00025 Score=43.75 Aligned_cols=43 Identities=16% Similarity=0.351 Sum_probs=29.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.....++... ..+..++|.|.|.| .|.+ +|+|++ ||..+.
T Consensus 85 ~~P~v~v~~~~~~--~~~~~~~L~C~a~gFyP~~i~v~W~k-~g~~~~ 129 (181)
T 3c5j_A 85 VPPEVTVLTNSPV--ELREPNVLICFIDKFTPPVVNVTWLR-NGKPVT 129 (181)
T ss_dssp BCCEEEEEESSCC--CTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred cCCceecccCChh--hcCCCCeEEEEEeEEECCCCEEEEEE-CCEECC
Confidence 4565555433322 33556999999999 6654 899998 888774
No 419
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.50 E-value=8.3e-05 Score=48.01 Aligned_cols=29 Identities=7% Similarity=0.132 Sum_probs=24.7
Q ss_pred ecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 23 FSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 23 ~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
+.+|+.++|.|.+.|.|.|.|+|+++++.
T Consensus 108 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~ 136 (363)
T 1wio_A 108 LLQGQSLTLTLESPPGSSPSVQCRSPRGK 136 (363)
T ss_dssp EESBSCEEEEEECCTTCCCCEEEECSSSC
T ss_pred EecCCCEEEEEEcCCCCCCeEEEEcCCCc
Confidence 45788899999999999999999985443
No 420
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=97.49 E-value=0.00012 Score=44.21 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=26.9
Q ss_pred CcEEecCCCCeEEEEEecc-cCCCeEEEEeCCCe
Q psy11557 19 NRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGT 51 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~ 51 (61)
+...+..|....|+|.|.| .|+|+|+|.|-+|.
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~ 55 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGT 55 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSS
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCe
Confidence 3345678889999999966 78999999997763
No 421
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=97.48 E-value=8.7e-05 Score=48.07 Aligned_cols=36 Identities=8% Similarity=0.210 Sum_probs=27.6
Q ss_pred cCCCcEEecCCCCeEEEEEecccC-CCeEEEEeCCCe
Q psy11557 16 EPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGT 51 (61)
Q Consensus 16 ~Pp~~~~~~~g~~v~L~C~A~G~P-~P~I~W~~~dg~ 51 (61)
.|+..+....|+.++|.|.|.|.| .|.|+|+++++.
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~ 47 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPA 47 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSS
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCcc
Confidence 345555446788999999999876 899999995543
No 422
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.48 E-value=8.3e-05 Score=45.87 Aligned_cols=33 Identities=15% Similarity=0.454 Sum_probs=27.5
Q ss_pred EcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
.+|+ .+.+.+|+.++|.|.+.|. |.|.|.|++.
T Consensus 7 ~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3ux9_B 7 TQPP-SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQ 41 (256)
T ss_dssp BCCS-EEEECTTCCEEEEEECCTTTTTTSCCEEEEE
T ss_pred ecCC-cEEEcCCCcEEEEEecCCCCCCCceEEEEEE
Confidence 3444 4667889999999999998 8999999984
No 423
>3c5j_B MHC class II antigen; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 2q6w_B 1a6a_B* 1d5m_B* 1j8h_B* 1d5z_B* 1d5x_B* 1d6e_B* 2seb_B* 2wbj_B* 1ymm_B* 3l6f_B* 3s4s_B 3s5l_B 1fyt_B* 1seb_B 1bx2_B* 1zgl_B 1fv1_B 1h15_B* 1hqr_B ...
Probab=97.48 E-value=0.00015 Score=44.52 Aligned_cols=43 Identities=21% Similarity=0.447 Sum_probs=28.2
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.....++... ..+..++|.|.|.| .|.+ +|+|++ ||+.+.
T Consensus 95 ~~P~v~v~~~~~~--~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 139 (190)
T 3c5j_B 95 VHPQVTVYPAKTQ--PLQHHNLLVCSVSGFYPGSIEVRWFR-NGQEEK 139 (190)
T ss_dssp BCCEEEEEEEC-------CCCEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred cCceEEEEeCCcc--ccCCceEEEEEEeeEECCceEEEEEE-CCeEcC
Confidence 4565555543332 23456899999999 5765 899998 888764
No 424
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.48 E-value=0.00015 Score=44.94 Aligned_cols=38 Identities=11% Similarity=0.233 Sum_probs=29.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 48 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 48 (61)
.|.+++.|. .+.+.+|..++|.|.+.+. |.|.|.|++.
T Consensus 136 ~~~v~~~p~-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 136 AQKVTQAQS-SVSMPVRKAVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp -CEEECCCC-CEEEETTCCEEECCEEECCCSSCEEEEEEE
T ss_pred CeeeEEeCC-EEEEcCCCCEEEEEECCCccCCceEEEeee
Confidence 456676654 4556788899999999996 8999999984
No 425
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.48 E-value=0.00014 Score=46.49 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=30.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.+|.+...|... +.+|+.++|.|.+.|.| +.++|+| ||..+
T Consensus 106 ~~P~l~~~p~~~--V~~G~~vtL~C~~~~~~-~~~~w~k-~g~~~ 146 (257)
T 1b6u_A 106 EKPSLSAQPGPT--VLAGESVTLSCSSRSSY-DMYHLSR-EGEAH 146 (257)
T ss_dssp CCCEEECSSCTT--CBTTCEEEEEEECSSCC-SEEEEEE-TTSSC
T ss_pred CCcceEccCCCc--cCCCCEEEEEEeCCCCC-cEEEEEE-CCccc
Confidence 356676665433 46788899999999975 7999998 55443
No 426
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.47 E-value=0.0001 Score=47.15 Aligned_cols=40 Identities=13% Similarity=0.278 Sum_probs=31.2
Q ss_pred CCcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCe
Q psy11557 8 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 51 (61)
Q Consensus 8 ~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~ 51 (61)
..+|.|...|. .+ +..|+.++|.|.+.+ +.+.++|+| ||.
T Consensus 5 ~~kP~i~~~P~-~~-V~~G~~VtL~C~~~~-~~~~~~W~k-~g~ 44 (257)
T 1b6u_A 5 HRKPSLLAHPG-PL-VKSEETVILQCWSDV-RFQHFLLHR-EGK 44 (257)
T ss_dssp CCCCEECCBSC-SE-EESSCCEEEEEEESS-CCSEEEEEE-EST
T ss_pred CCCCEEEEcCC-CE-ecCCCCEEEEEecCC-CCcEEEEEE-CCC
Confidence 45788888864 33 557888999999986 679999998 544
No 427
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.47 E-value=0.0002 Score=44.27 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=29.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~d 49 (61)
.+++. +..+.+..|..++|.|.+.|. +.+.|.|++.+
T Consensus 3 ~v~q~-p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 41 (242)
T 1hxm_B 3 HLEQP-QISSTKTLSKTARLECVVSGITISATSVYWYRER 41 (242)
T ss_dssp EEECC-CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEEC
T ss_pred ccCcC-CceEEecCCCcEEEEEEeCCccccCceEEEEEeC
Confidence 45555 555667789899999999997 78999999853
No 428
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.47 E-value=5.6e-05 Score=46.49 Aligned_cols=39 Identities=10% Similarity=0.236 Sum_probs=27.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEec---ccCCCeEEEEeCCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTAR---GSPNPEIIWIRSDG 50 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~---G~P~P~I~W~~~dg 50 (61)
+.++.. +..+.+.+|+.++|.|.+. |.|.|.|+|++.++
T Consensus 6 ~~v~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~ 47 (268)
T 3mj6_A 6 PGLTVS-SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKD 47 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESS
T ss_pred cccccC-CCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCC
Confidence 345555 4456677898999999999 99999999999543
No 429
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=97.46 E-value=0.00014 Score=44.51 Aligned_cols=35 Identities=11% Similarity=0.159 Sum_probs=27.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.+|+. +.+..|+.++|.|.+.|.| .+.|.|++.+
T Consensus 4 l~qp~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (225)
T 1op3_H 4 LVESGG-GLVKAGGSLILSCGVSNFRISAHTMNWVRRV 40 (225)
T ss_dssp EEEECC-EEEETTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EEcCCC-eEecCCCCEEEEEEecCcccCCceEEEEEeC
Confidence 344444 4567888999999999988 8999999854
No 430
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.45 E-value=9.4e-05 Score=45.99 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=27.0
Q ss_pred CCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
+|..+.+..|+.++|.|.+.+.+.+.|.|++
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQ 37 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEE
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEE
Confidence 3556667789899999999999999999997
No 431
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.45 E-value=0.00022 Score=41.75 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=28.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
++|. |..+...+|+.++|+|.+++. +.+.+.|++.
T Consensus 3 V~Q~-p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq 39 (126)
T 3moq_A 3 VDQT-PRTATKETGESLTINCVLRDASFELKDTGWYRT 39 (126)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred eEEC-CceEEEeCCCCEEEEEEeecCccCCceEEEEEe
Confidence 4555 455667889999999999987 6789999984
No 432
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.45 E-value=0.00016 Score=44.10 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=27.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.+|+. +.+..|..++|.|.+.|.| .+.|.|++.+
T Consensus 4 ~~q~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (220)
T 2fbj_H 4 LLESGG-GLVQPGGSLKLSCAASGFDFSKYWMSWVRQA 40 (220)
T ss_dssp EEEECC-EEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EecCCC-eEecCCCcEEEEEEecCccCCCceEEEEEEC
Confidence 344444 5677898999999999987 7999999853
No 433
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.44 E-value=7.3e-05 Score=43.99 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=27.3
Q ss_pred cCCCcEEecCCCCeEEEEEecccC----CCeEEEEeC
Q psy11557 16 EPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRS 48 (61)
Q Consensus 16 ~Pp~~~~~~~g~~v~L~C~A~G~P----~P~I~W~~~ 48 (61)
.|+..+.+.+|+.++|.|.+.|.| .|.|+|++.
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~ 41 (214)
T 3jz7_A 5 TPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS 41 (214)
T ss_dssp -CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEE
T ss_pred cCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEec
Confidence 345667778899999999999998 689999984
No 434
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.44 E-value=0.00017 Score=47.88 Aligned_cols=40 Identities=20% Similarity=0.360 Sum_probs=27.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEeccc-CCC---eEEEEeCCCe
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGS-PNP---EIIWIRSDGT 51 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P---~I~W~~~dg~ 51 (61)
+|+..|.....+..|..++|.|.|.|. |.| .|+|+++++.
T Consensus 169 v~~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~ 212 (376)
T 2aty_A 169 VFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE 212 (376)
T ss_pred EEEeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCcc
Confidence 445543322225667789999999999 544 6999996644
No 435
>1uvq_B HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_B* 1jk8_B* 2nna_B 1s9v_B 2iad_B 1muj_B* 1d9k_D* 1iak_B* 1jl4_B 1f3j_B* 2pxy_D 1k2d_B* 1u3h_D 2z31_D 3mbe_B* 1aqd_B 3pdo_B 3pgc_B 3pgd_B 1klu_B ...
Probab=97.44 E-value=0.00021 Score=44.32 Aligned_cols=43 Identities=14% Similarity=0.357 Sum_probs=26.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.....++... ..+..++|.|.|.| +|.+ .|+|++ ||..+.
T Consensus 93 ~~P~V~v~~~~~~--~~~~~~~L~C~v~gFyP~~i~v~W~~-~g~~~~ 137 (198)
T 1uvq_B 93 VEPTVTISPSRTE--ALNHHNLLVCSVTDFYPGQIKVRWFR-NDQEET 137 (198)
T ss_dssp BCCEEEEEEC----------CEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred ccceEEEEecCcc--cCCCCcEEEEEEeeEeCCceEEEEEE-CCEecc
Confidence 4666665544432 23456999999999 5765 899998 887763
No 436
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.44 E-value=0.0002 Score=43.74 Aligned_cols=34 Identities=12% Similarity=0.356 Sum_probs=27.8
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
.+++. +..+.+..|+.++|.|.+.| |.+.|+|++
T Consensus 4 ~v~~~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k 37 (240)
T 3q5y_A 4 GVVQS-PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQ 37 (240)
T ss_dssp CCEEE-CSEEEEETTCCEEEEEECCT-TCCEEEEEE
T ss_pred ccccC-cceeeecCCCcEEEEEEeCC-CCceEEEEE
Confidence 45555 45566778989999999998 999999998
No 437
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=97.43 E-value=0.00019 Score=41.93 Aligned_cols=35 Identities=14% Similarity=0.323 Sum_probs=28.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
..+++.| ..+.+.+|..++|+|.+.|. +.|.|++.
T Consensus 18 ~~v~q~p-~~~~v~~G~~v~L~C~~~~~--~~v~W~r~ 52 (133)
T 3khq_A 18 SQIWQHP-RFAAKKRSSMVKFHCYTNHS--GALTWFRK 52 (133)
T ss_dssp CSEEEEC-SEEEECTTCCEEEEEEESSS--SCEEEEEE
T ss_pred CceEEcC-ceEEEeCCCeEEEEEEeCCC--CEEEEEEe
Confidence 3566764 55567889999999999998 99999986
No 438
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=97.43 E-value=0.00013 Score=46.09 Aligned_cols=36 Identities=11% Similarity=0.323 Sum_probs=28.3
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCCC-----eEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P-----~I~W~~~ 48 (61)
++++.| ..+....|+.++|.|.+.|.|.| .|+|+++
T Consensus 2 Vvv~~P-~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~ 42 (313)
T 4fqp_A 2 VVVQAP-TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH 42 (313)
T ss_dssp CEEECC-SEECCBTTSCEEECCEEECCTTSCCCCCEEEEEET
T ss_pred eEEcCC-CEEEEecCCCEEEEEEEECCCCCccceEEEEEEEC
Confidence 356675 45556678899999999999888 4999984
No 439
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.43 E-value=0.00011 Score=46.77 Aligned_cols=42 Identities=17% Similarity=0.375 Sum_probs=27.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~i 53 (61)
+|.+...++... +..|..++|.|.|.|. |.| .|+|++ ||..+
T Consensus 129 ~P~v~~~~p~~~-v~~g~~v~L~C~~~g~~P~~i~v~W~k-~g~~~ 172 (261)
T 2xqy_G 129 APSVYPLAPVCG-DTTGSSVTLGCLVKGYFPEPVTLTWNS-GSLSS 172 (261)
T ss_dssp CCEEEEECCCCC---CCSEEEEEEEEEEEBSSCCEEEEGG-GTCCT
T ss_pred CCeEEEeCCCcc-ccCCCcEEEEEEEEeEeCCCCEEEEec-CCCcC
Confidence 454443333332 3457789999999995 888 999998 55543
No 440
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=97.43 E-value=0.00014 Score=43.92 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=27.2
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.+|+. +.+..|..++|.|.+.|.| .+.|+|++.+
T Consensus 4 ~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (222)
T 1q9r_B 4 LVESGG-GLVQSGGSLRLSCATSGFTFTDYYMSWVRQP 40 (222)
T ss_dssp EEEECC-CEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EecCCc-eeEcCCCEEEEEEEecCccCCCCcEEEEEEC
Confidence 344444 4567888999999999987 8999999853
No 441
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=97.43 E-value=7.2e-05 Score=45.18 Aligned_cols=41 Identities=12% Similarity=0.211 Sum_probs=26.4
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCe
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGT 51 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~ 51 (61)
..|.+...++... +..|..++|.|.|.|.|++ .|+|++ ||.
T Consensus 119 ~~P~i~~~~~~~~-~~~g~~v~l~C~~~~~~p~~~~v~W~~-~g~ 161 (215)
T 3nl4_H 119 KAPSVFPLAPCCG-DTPSSTVTLGCLVKGYLPEPVTVTWNS-GTL 161 (215)
T ss_dssp BCCEEEEECCCTT-CCC--CEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred CCCEEEEecCCcc-ccCCCcEEEEEEEeeeeCCCeEEEEee-CCE
Confidence 4566664444442 3457789999999997544 577987 665
No 442
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=97.43 E-value=0.00015 Score=41.10 Aligned_cols=39 Identities=21% Similarity=0.534 Sum_probs=30.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccC----CCeEEEEeCC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRSD 49 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P----~P~I~W~~~d 49 (61)
+-.++..| ..+.+..|..++|.|.+++.+ .+.|.|++.+
T Consensus 7 ~~~~v~~p-~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~ 49 (120)
T 3noi_A 7 GALWVSQP-PEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDE 49 (120)
T ss_dssp CBCCEECC-SEEEEETTSCEEECCEECCCTTSCCCEEEEEEESS
T ss_pred EEEEEcCC-CEEEEEcCCCEEEEeeecCCCCCCceeEEEEEecc
Confidence 33556665 456677899999999999877 6789999975
No 443
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.43 E-value=0.00015 Score=44.86 Aligned_cols=43 Identities=16% Similarity=0.219 Sum_probs=32.1
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCC-CeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~-P~I~W~~~dg~~i 53 (61)
.+|.|...|.... +..|..+.|.|.+.|.|. +.+.|++ ||..+
T Consensus 185 ~~p~i~~~~~~~~-~~~g~~v~l~C~~~~~~~~~~~~w~~-~~~~~ 228 (292)
T 4dkd_C 185 GPPALTLVPAELV-RIRGEAAQIVCSASSVDVNFDVFLQH-NNTKL 228 (292)
T ss_dssp SSCEEEEESSCBC-CCSSSCEEEEEEEEESSSCCEEECCB-SSCCC
T ss_pred CCCeEEccCCcee-EecCCCEEEEEEecCCCCceEEEEeC-CCccc
Confidence 4788888865543 457888999999999885 5688887 55433
No 444
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.43 E-value=0.00025 Score=39.82 Aligned_cols=36 Identities=17% Similarity=0.391 Sum_probs=28.9
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+...+|..++|.|.+++.+.+.|.|++..
T Consensus 4 v~q~-p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~ 39 (112)
T 1fo0_B 4 LEQN-PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQD 39 (112)
T ss_dssp EEEE-CSEEECCTTCCEEEEEEESCTTCCEEEEEEEC
T ss_pred EEeC-CCeEEEecCCcEEEEEEeCCCCCceEEEEEEC
Confidence 4555 45556788999999999988889999999853
No 445
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=97.43 E-value=0.00041 Score=40.63 Aligned_cols=46 Identities=24% Similarity=0.303 Sum_probs=30.0
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeeec
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 54 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i~ 54 (61)
....+|.....+++.. ..|..++|.|.|.|.-++ +|+|++ ||+.+.
T Consensus 20 ~~~~~P~V~v~~~~~~--~~g~~~~L~C~v~gFyP~~I~v~W~k-nG~~~~ 67 (119)
T 3o81_A 20 QADLTPKVQVYSRFPA--SAGTKNVLNCFAAGFHPPKISITLMK-DGVPME 67 (119)
T ss_dssp -CCCSCEEEEEESSCC--CTTSCEEEEEEEEEESSSCCEEEEEE-TTEECT
T ss_pred CCccCCceEEEcCCcc--cCCCcEEEEEEEecccCCCcEEEEEE-CCEECC
Confidence 3445665554333322 235569999999997655 799998 888763
No 446
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.43 E-value=0.00025 Score=39.91 Aligned_cols=32 Identities=13% Similarity=0.350 Sum_probs=26.7
Q ss_pred CCCcEEecCCCCeEEEEEeccc-CCCeEEEEeC
Q psy11557 17 PPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 48 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 48 (61)
+|..+.+.+|..++|.|.+.+. +.+.|.|++.
T Consensus 6 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq 38 (116)
T 1fo0_A 6 TQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQ 38 (116)
T ss_dssp CCCEEEEETTCCEEECCEECCCCSSCEEEEEEE
T ss_pred CCCcEEEecCCcEEEEeEecCCCCCeEEEEEEe
Confidence 3555667889999999999998 7789999985
No 447
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.42 E-value=4.1e-05 Score=48.33 Aligned_cols=40 Identities=13% Similarity=0.199 Sum_probs=26.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEeccc----CCCeEEEEeC
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGS----PNPEIIWIRS 48 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~----P~P~I~W~~~ 48 (61)
..|.+....+..+.+.+|+.++|.|.+.|. |.+.|+|+++
T Consensus 12 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~ 55 (331)
T 3u83_A 12 RDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKS 55 (331)
T ss_dssp ---------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEE
T ss_pred CCCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEc
Confidence 345554454666777889999999999998 6678999994
No 448
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=97.41 E-value=0.00023 Score=42.97 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=27.8
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.+|+ .+.+..|..++|.|.+.|.| .+.|+|++.+
T Consensus 4 v~~p~-~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (220)
T 1pz5_B 4 VEESG-GGLVQPGGSMKLSCVASGFTFSNYWMEWVRQS 40 (220)
T ss_dssp EEEEC-CEEECTTCCEEEEEEEESSCGGGSEEEEEEEE
T ss_pred EeccC-CEEEcCCCeEEEEEEEcCCccCCccEEEEEeC
Confidence 34444 45677888999999999988 8999999853
No 449
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.41 E-value=0.00017 Score=49.05 Aligned_cols=41 Identities=15% Similarity=0.332 Sum_probs=31.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeE----EEEeC-CCe
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEI----IWIRS-DGT 51 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I----~W~~~-dg~ 51 (61)
+|.|...| ..+.+.+|..+.|.|.+.|.|.|.+ +|++. ||.
T Consensus 331 ~p~~~~~~-~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~ 376 (585)
T 2ocw_A 331 ESTIPRSP-TVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGR 376 (585)
T ss_pred ccccccCC-cceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCC
Confidence 45565554 4555667888999999999999998 89973 554
No 450
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.41 E-value=0.00016 Score=43.51 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=27.6
Q ss_pred CCcEEecCCCCeEEEEEecc-cCCCeEEEEeCCCeee
Q psy11557 18 PNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAV 53 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg~~i 53 (61)
|..+....|+.++|.|.+.+ .|.+.|+|++ +|..+
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~-~~~~i 40 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLF-NETSL 40 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEE-TTEEE
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEE-CCEEE
Confidence 45566778989999999986 5678999998 55544
No 451
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.39 E-value=0.00018 Score=45.34 Aligned_cols=35 Identities=14% Similarity=0.375 Sum_probs=27.1
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccCC--CeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P~--P~I~W~~~d 49 (61)
+..++.. .+.+|+.++|.|.+.|.|. |.|.|++.+
T Consensus 142 ~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 178 (264)
T 2gjj_A 142 LQQSGPE-VVKTGASVKISCKASGYSFTGYFINWVKKN 178 (264)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred EeCCCCE-EEcCCCcEEEEEEEeCCccCCeEEEEEEEC
Confidence 3343444 4678889999999999985 899999853
No 452
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.39 E-value=0.00015 Score=42.87 Aligned_cols=28 Identities=4% Similarity=0.116 Sum_probs=24.3
Q ss_pred EecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 22 DFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 22 ~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
.+.+|+.++|.|.+.|.|.+.|+|++.+
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~ 37 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGN 37 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESS
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCC
Confidence 3557888999999999999999999853
No 453
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.38 E-value=0.0002 Score=45.53 Aligned_cols=37 Identities=14% Similarity=0.360 Sum_probs=29.7
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
..+++|+ .+.+..|..++|.|.+.|.| .+.|.|++.+
T Consensus 8 ~~~~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 46 (261)
T 2xqy_G 8 VQLQQPG-AELVKPGASVKMSCKASGYSFTSYWMNWVKQR 46 (261)
T ss_dssp CEEECCS-EEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred eeEECCC-CEEEcCCCCEEEEEEeCCcccCCceEEEEEeC
Confidence 3455654 55678899999999999998 7999999864
No 454
>1uvq_A HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_A* 4d8p_A 1s9v_A 2nna_A 1jk8_A*
Probab=97.38 E-value=0.00041 Score=43.53 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=29.6
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.....+.... ..+..++|.|.|.| +|.+ +|+|++ ||+.+.
T Consensus 88 ~~P~V~v~~~~~~--~~~~~~tL~C~a~gFyP~~i~v~W~k-ng~~~~ 132 (197)
T 1uvq_A 88 EVPEVTVFSKSPV--TLGQPNTLICLVDNIFPPVVNITWLS-NGQSVT 132 (197)
T ss_dssp CCCEEEEEESSCC--CTTSCEEEEEEEEEECSSCCEEEEEE-TTEEEC
T ss_pred CCCCcccccCCcc--ccCCccEEEEEEEeEcCCCCEEEEEE-CCEEcc
Confidence 4565554433322 23556999999999 6754 899998 888774
No 455
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=97.38 E-value=0.00044 Score=40.51 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=29.6
Q ss_pred CCCCcceEEEcCCCcEEecCCCCeEEEEEecccCCC--eEEEEeCCCeee
Q psy11557 6 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAV 53 (61)
Q Consensus 6 ~~~~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P--~I~W~~~dg~~i 53 (61)
....+|.....+++.. ..|..++|.|.|.|.-++ +|+|++ ||+.+
T Consensus 20 ~~~~~P~V~v~~~~~~--~~g~~~~L~C~~~gFyP~~I~v~W~k-nG~~~ 66 (119)
T 3jts_B 20 AIQRTPKIQVYSRHPA--ENGKSNFLNCYVSGFHPSDIEVDLLK-NGERI 66 (119)
T ss_dssp -CCBCCEEEEEESSCC--CTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CCccCCEEEEEccCcc--cCCCcEEEEEEEeCccCCCEEEEEEE-CCEEC
Confidence 3445666555333322 245569999999996444 899998 88876
No 456
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=97.38 E-value=0.00011 Score=44.03 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=26.2
Q ss_pred EcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
.+|+.. .+..|..++|.|.+.|.| .|.|+|++.
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (210)
T 3d9a_H 5 QESGPS-LVKPSQTLSLTCSVTGDSITSDYWSWIRK 39 (210)
T ss_dssp EEESCS-EECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ecCCCE-EecCCCcEEEEEEEecccCCCCcEEEEEe
Confidence 344444 567888999999999986 499999985
No 457
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.37 E-value=0.00032 Score=44.41 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=30.5
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
.+|.+...|.. .+..|..++|.|.|.+ |.+.++|++ ||..+
T Consensus 218 ~~p~i~~~~~~--~v~~G~~v~L~C~~~~-~~~~~~W~k-~g~~~ 258 (316)
T 3vh8_G 218 EKPSLSAQPGP--KVQAGESVTLSCSSRS-SYDMYHLSR-EGGAH 258 (316)
T ss_dssp CCCEEEEESCS--CCCTTSCCEEEEEESS-CCSEEEEEE-TTSSC
T ss_pred CCCeEEeCCCC--eecCCCcEEEEEECCC-CCcEEEEEE-CCCcC
Confidence 45667666443 2467888999999985 889999998 55543
No 458
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=97.37 E-value=0.0002 Score=44.70 Aligned_cols=41 Identities=17% Similarity=0.407 Sum_probs=26.8
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCe
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGT 51 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~ 51 (61)
..|.+...++... ...|..++|.|.|.| .|.| +|+|++ ||.
T Consensus 123 ~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~W~~-~~~ 165 (253)
T 3liz_H 123 TPPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSL 165 (253)
T ss_dssp BCCEEEEECC-------CCEEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred CCCeEEEecCCcc-cCCCCcEEEEEEEeeEeCCCeEEEEEe-CCe
Confidence 4565554434432 335777999999999 8888 999998 554
No 459
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=97.36 E-value=0.00033 Score=38.21 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=26.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEe-cccCCCe----EEEEeC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTA-RGSPNPE----IIWIRS 48 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A-~G~P~P~----I~W~~~ 48 (61)
++.|+. +....|+.++|.|.+ .+.+.+. |.|++.
T Consensus 4 v~~p~~-v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 42 (118)
T 3udw_C 4 VQAPTQ-VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH 42 (118)
T ss_dssp EECCSE-EEEETTSCEEECCEEECCTTCCCEEEEEEEEET
T ss_pred EeCCCe-EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEc
Confidence 455555 667789899999999 6677665 999995
No 460
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.36 E-value=0.00019 Score=44.41 Aligned_cols=34 Identities=9% Similarity=0.337 Sum_probs=26.8
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 48 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 48 (61)
+.+|+. +.+.+|+.++|.|.+.|.| .+.|.|++.
T Consensus 6 v~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3umt_A 6 LQQSGL-ELVKPGASVKISCKTSGYTFTEYTMHWVKQ 41 (256)
T ss_dssp EEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEccCc-eEEcCCCCEEEEEEEecccccccEEEEEEE
Confidence 344444 4477899999999999987 899999974
No 461
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=97.35 E-value=0.00021 Score=39.71 Aligned_cols=32 Identities=19% Similarity=0.460 Sum_probs=26.3
Q ss_pred CCcEEecCCCCeEEEEE-ecccC-CCeEEEEeCC
Q psy11557 18 PNRIDFSNTTGAQVECT-ARGSP-NPEIIWIRSD 49 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~-A~G~P-~P~I~W~~~d 49 (61)
|..+.+.+|..++|.|. +++.+ .+.|.|++.+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~ 40 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQR 40 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEEC
Confidence 35667788999999999 99887 5899999865
No 462
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=97.33 E-value=1.6e-05 Score=48.62 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=25.6
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEecccCC---CeEEE
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIW 45 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~---P~I~W 45 (61)
+|++. |..+.+..|..++|.|.|.|.+. +.|+|
T Consensus 6 v~~~~-P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W 41 (214)
T 1ow0_A 6 LSLHR-PALEDLLLGSEANLTCTLTGLRDASGVTFTW 41 (214)
T ss_dssp CEEEC-CCHHHHHHCSSCCCEEEETTCCSCCCCCCCB
T ss_pred EEEEC-cChHHhccCCCcEEEEEEeeeECCCCeEEEE
Confidence 44555 45555677889999999999865 79999
No 463
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.32 E-value=0.00032 Score=39.28 Aligned_cols=36 Identities=17% Similarity=0.386 Sum_probs=27.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~d 49 (61)
+++. |..+.+.+|..++|.|.+.+. +.+.|.|++..
T Consensus 3 v~q~-p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~ 39 (116)
T 1tvd_A 3 VTQS-SPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIR 39 (116)
T ss_dssp EECC-SCCEEEETTCCEEECCEEECCSSSCCEEEEEEC
T ss_pred eecC-CCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeC
Confidence 3444 455567789999999999876 67899998853
No 464
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=97.32 E-value=4.7e-05 Score=48.63 Aligned_cols=41 Identities=20% Similarity=0.454 Sum_probs=21.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEeccc-CCC-eEEEEeCCCee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 52 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dg~~ 52 (61)
+|.+...++... ...|..++|.|.|.|. |.| +|+|++ ||..
T Consensus 133 ~P~v~~~~p~~~-~~~g~~v~L~C~~~g~~P~pi~v~W~k-~g~~ 175 (257)
T 3bn9_D 133 GPSVFPLAPSSK-STSGGTAALGCLVKDYFPEPVTVSWNS-GALT 175 (257)
T ss_dssp CCEECCCCC------------CCCEEEEEBSSCCEEEETT-TTCC
T ss_pred CCcEEEecCccc-ccCCCcEEEEEEEeeEECCCcEEEEee-CCCc
Confidence 454443333332 2456779999999996 888 999998 5554
No 465
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=97.30 E-value=0.00032 Score=39.22 Aligned_cols=34 Identities=18% Similarity=0.476 Sum_probs=27.1
Q ss_pred EcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeCC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSD 49 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~d 49 (61)
+. |..+...+|..++|.|.+++. +.+.|.|++..
T Consensus 3 Q~-p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~ 37 (115)
T 2atp_B 3 QT-PSSLLVQTNHTAKMSCEVKSISKLTSIYWLRER 37 (115)
T ss_dssp EE-CSEEEECTTSCEEEEEECCSSCCSSEEEEEEEE
T ss_pred cC-CCCEEEcCCCcEEEEEEecCCCCcccEEEEEeC
Confidence 44 455667889999999999986 67899999853
No 466
>1iak_A MHC class II I-AK; histocompatibility antigen, peptide complex, histocompa antigen I-AK; HET: NAG; 1.90A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1d9k_C* 1k2d_A* 1jl4_A 2pxy_C 1u3h_C 2z31_C 1muj_A* 1lnu_A* 3c5z_C 3c60_C 3c6l_C 3rdt_C 2iad_A 1iao_A 1es0_A 3cup_A* 3mbe_A* 1f3j_A*
Probab=97.27 E-value=0.00061 Score=42.74 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=29.0
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecc-cCCC-eEEEEeCCCeeec
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 54 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dg~~i~ 54 (61)
.+|.....++... ..+..++|.|.|.| +|.+ +|+|++ ||+.+.
T Consensus 89 ~~P~V~v~~~~~~--~~~~~~tL~C~a~gFyP~~i~v~W~k-ng~~~~ 133 (199)
T 1iak_A 89 EAPQATVFPKSPV--LLGQPNTLICFVDNIFPPVINITWLR-NSKSVT 133 (199)
T ss_dssp CCCEEEEEESSCC--CTTSCEEEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred cCCCcccccCCcc--ccCCCcEEEEEEeeEeCCCcEEEEEE-CCEEcc
Confidence 4565444433322 23556999999999 5754 899998 888764
No 467
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=97.27 E-value=0.00028 Score=43.10 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=27.3
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+.+|+ .+.+..|..++|.|.+.|.| .+.|.|++.+
T Consensus 4 v~qp~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (223)
T 1dee_B 4 LVESG-GGVVQPGKSLRLSCAASGFTFSGYGMHWVRQA 40 (223)
T ss_dssp EEEEC-CCEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EEcCC-CEEEcCCCcEEEEEEecCcccCCceEEEEEEC
Confidence 34444 45567898999999999987 5899999853
No 468
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=97.26 E-value=0.00018 Score=44.02 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.1
Q ss_pred EcCCCcEEecCCCCeEEEEEecccCC----CeEEEEeCC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGSPN----PEIIWIRSD 49 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~P~----P~I~W~~~d 49 (61)
.+|+. +.+..|..++|.|.+.|.|. +.|+|++.+
T Consensus 5 ~qp~~-~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~ 42 (228)
T 3bae_H 5 KESGP-GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQP 42 (228)
T ss_dssp EEECC-SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEE
T ss_pred eCCCc-eeecCCCeEEEEEEEeCcccCCCceeEEEEEEC
Confidence 34444 45678889999999999986 999998853
No 469
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=97.26 E-value=0.00026 Score=43.00 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=26.2
Q ss_pred cCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 16 EPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 16 ~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+|+. +.+..|..++|.|.+.|.| .+.|.|++.+
T Consensus 6 qp~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (215)
T 1c5d_H 6 ESGP-GLVQPSQTLSLTCTVSGFPLTTNGVSWVRQP 40 (215)
T ss_dssp EECC-CEECTTCCEEEEEEECSSCTTSCCEEEEEEC
T ss_pred cCCC-eeecCCCcEEEEEEECCCcCCCCeEEEEEEC
Confidence 3444 4567888999999999986 6899999853
No 470
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.26 E-value=0.00025 Score=42.35 Aligned_cols=30 Identities=23% Similarity=0.495 Sum_probs=25.8
Q ss_pred cCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 16 EPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 16 ~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
+|+ .+.+.+|+.++|.|.+. |.|.|+|++.
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~ 35 (211)
T 3tv3_L 6 QPP-SASGSPGQSITISCTGT--SNNFVSWYQQ 35 (211)
T ss_dssp CCS-EEEECTTCEEEEEEECC--CSSCEEEEEE
T ss_pred eCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEE
Confidence 345 67788899999999999 9999999984
No 471
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.25 E-value=0.00041 Score=42.78 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=28.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
+++. |..+.+..|..++|.|.+.+. +.+.|.|++.
T Consensus 4 v~q~-p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 40 (230)
T 1ypz_F 4 LEQP-EISISRPRDETAQISCKVFIESFRSVTIHWYRQ 40 (230)
T ss_dssp EECS-CSEEEEETTSCEEEEEEECCGGGGGCCEEEEEE
T ss_pred cccc-CCEEEEeCCCcEEEEEEeeccccCccEEEEEEE
Confidence 3444 556667789999999999986 7899999985
No 472
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=97.25 E-value=0.00033 Score=40.44 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=27.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~d 49 (61)
+++.| ..+.+.+|..++|.|.+++. +.+.|.|++..
T Consensus 3 v~Q~p-~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~ 40 (121)
T 2i24_N 3 VDQTP-QRITKETGESLTINCVVRDSRCVLSTGYWYRKP 40 (121)
T ss_dssp EEEEC-SEEEEETTCCEEEEEEECSCCCCEEEEEEEEEC
T ss_pred cEECC-cEEEEecCCcEEEEeEccCCCCCCCEEEEEEeC
Confidence 45554 45567789899999999987 46789999853
No 473
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.25 E-value=0.00044 Score=43.21 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=27.4
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCC--CeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~--P~I~W~~~ 48 (61)
++..|. ...+.+|..++|.|.+.|.|. |.|+|++.
T Consensus 154 ~~~~~~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 154 KLDETG-GGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp EEEEEC-CEEECTTCCEEEEEEEESSCGGGCEEEEEEE
T ss_pred EEECCC-ceEecCCCcEEEEEEecCccccccEEEEEEe
Confidence 445543 345778889999999999874 99999984
No 474
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.25 E-value=0.00063 Score=47.39 Aligned_cols=42 Identities=19% Similarity=0.262 Sum_probs=30.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecc--cCCCeEEEEeCCCee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARG--SPNPEIIWIRSDGTA 52 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G--~P~P~I~W~~~dg~~ 52 (61)
.|.+...|+..+.+..|+.++|.|.+.| .|.+.|+|++ +|..
T Consensus 223 ~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~-~~~~ 266 (772)
T 3v2a_R 223 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSK 266 (772)
T ss_dssp EEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEEC-C---
T ss_pred cceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEec-CCcc
Confidence 4555666666566778989999999999 5577899998 4443
No 475
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.24 E-value=0.00059 Score=46.90 Aligned_cols=41 Identities=17% Similarity=0.335 Sum_probs=28.0
Q ss_pred cceEEEcCCCcEEecCCCCeE-EEEEecccCCC--eEEEEeCCCeeecC
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQ-VECTARGSPNP--EIIWIRSDGTAVGD 55 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~-L~C~A~G~P~P--~I~W~~~dg~~i~~ 55 (61)
+|.+...++.. .|..++ |.|.|.|.++| .|+|++ ||.++..
T Consensus 403 ~p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~k-~g~~~~~ 446 (512)
T 1zvo_C 403 KLSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWLE-DQREVNT 446 (512)
T ss_pred CCEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEEE-CCeECcC
Confidence 45444443333 466689 99999996544 589998 8887743
No 476
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.23 E-value=0.00032 Score=43.69 Aligned_cols=35 Identities=17% Similarity=0.414 Sum_probs=28.2
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEe
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 47 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~ 47 (61)
..+++. +..+.+..|..++|.|.+.+ |.+.|+|++
T Consensus 28 ~~v~~~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k 62 (270)
T 3qib_D 28 MKVIQT-PRYLVKGQGQKAKMRCIPEK-GHPVVFWYQ 62 (270)
T ss_dssp CCCEEE-CSEEEEETTSCEEEEEECCT-TCCEEEEEE
T ss_pred eeEEeC-CCeEEEcCCCCEEEEEEecC-CCceEEEEE
Confidence 345555 56566778999999999987 889999998
No 477
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=97.21 E-value=0.00026 Score=38.71 Aligned_cols=34 Identities=26% Similarity=0.452 Sum_probs=26.9
Q ss_pred cCCCcEEecCCCCeEEEEEecccCCC----eEEEEeCC
Q psy11557 16 EPPNRIDFSNTTGAQVECTARGSPNP----EIIWIRSD 49 (61)
Q Consensus 16 ~Pp~~~~~~~g~~v~L~C~A~G~P~P----~I~W~~~d 49 (61)
.++..+....|+.++|.|.+.+.|.+ .|.|++.+
T Consensus 10 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~ 47 (126)
T 1eaj_A 10 TPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISP 47 (126)
T ss_dssp SSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEE
T ss_pred CCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeC
Confidence 44556667789999999999998764 59999854
No 478
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=97.20 E-value=0.00058 Score=40.71 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=29.0
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~ 48 (61)
+++. |..+.+.+|..++|.|.+.+.+.+.|.|++.
T Consensus 3 v~Q~-p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq 37 (143)
T 3u6r_L 3 LTQS-PATLSLSPGERATLSCRASQSVNKYLAWYQQ 37 (143)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred EEEC-CCEEEEeCCCCEEEEEEECCCCceeeEEEEE
Confidence 4555 5556678899999999999998899999985
No 479
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=97.19 E-value=0.00075 Score=37.82 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=27.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 48 (61)
.++ |+ .+...+|..++|.|...+. +.+.|.|++.
T Consensus 5 v~q-p~-~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 39 (115)
T 2otu_A 5 LTQ-SS-SASFSLGASAKLTCTLSSQHSTYTIEWYQQ 39 (115)
T ss_dssp EEE-CC-CEECCTTCCEEEEEEECGGGTTCCEEEEEE
T ss_pred EEc-CC-CEEECCCCCEEEEEEecCCCCCeEEEEEEe
Confidence 345 54 4567889999999999987 7889999984
No 480
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=97.19 E-value=0.00038 Score=39.70 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=28.0
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEec-------ccCCCeEEEEeCC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTAR-------GSPNPEIIWIRSD 49 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~-------G~P~P~I~W~~~d 49 (61)
.+++. |..+....|..++|.|... +.+.+.|.|++.+
T Consensus 8 ~~~q~-p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~ 51 (132)
T 1nko_A 8 YSLTM-QSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAG 51 (132)
T ss_dssp CEEEE-CSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-
T ss_pred eEEeC-CCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECC
Confidence 34455 4566778898999999998 4567899999964
No 481
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=97.19 E-value=0.00029 Score=39.84 Aligned_cols=31 Identities=10% Similarity=0.276 Sum_probs=26.3
Q ss_pred CCCcEEecCCCCeEEEEEecccC---CCeEEEEeC
Q psy11557 17 PPNRIDFSNTTGAQVECTARGSP---NPEIIWIRS 48 (61)
Q Consensus 17 Pp~~~~~~~g~~v~L~C~A~G~P---~P~I~W~~~ 48 (61)
|+. +...+|..++|.|.+.+.+ .+.|.|++.
T Consensus 7 ~~~-~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq 40 (120)
T 1oaq_L 7 ESA-LTTSPGETVTLTCRSSTGAVTTSNYANWVQE 40 (120)
T ss_dssp CSE-EEECTTCEEEEEEEETTBCCCGGGCCEEEEE
T ss_pred CCc-EEEcCCCCEEEEEEeCCCccCCCCEEEEEEe
Confidence 455 6778899999999999987 689999984
No 482
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.18 E-value=0.00027 Score=42.53 Aligned_cols=33 Identities=3% Similarity=0.205 Sum_probs=25.7
Q ss_pred CCcEEecCCCCeEEEEEecc-cCCCeEEEEeCCC
Q psy11557 18 PNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDG 50 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~G-~P~P~I~W~~~dg 50 (61)
...+...+|++++|+|.+.+ .+.+.|+|++.++
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~ 39 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTN 39 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSS
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCC
Confidence 34566778999999999976 3489999999533
No 483
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=97.16 E-value=0.00015 Score=40.59 Aligned_cols=31 Identities=13% Similarity=0.321 Sum_probs=26.5
Q ss_pred CCcEEecCCCCeEEEEEec-ccCCCeEEEEeC
Q psy11557 18 PNRIDFSNTTGAQVECTAR-GSPNPEIIWIRS 48 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A~-G~P~P~I~W~~~ 48 (61)
|..+...+|..++|.|.++ +.+.+.|.|++.
T Consensus 6 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 37 (111)
T 2qhl_A 6 LHVKTVKRGENVTMECSMSKVKDKDKLAWYRQ 37 (111)
T ss_dssp CEEEECCTTCCEEECCBCTTCSCGGGEEEEEE
T ss_pred CceEEEeCCCCEEEEEEccCCcccceEEEEEe
Confidence 4456677899999999999 988999999984
No 484
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=97.16 E-value=0.00059 Score=37.55 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=24.0
Q ss_pred EEecCCCCeEEEEEecccCCCe-----EEEEeCCC
Q psy11557 21 IDFSNTTGAQVECTARGSPNPE-----IIWIRSDG 50 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~P~P~-----I~W~~~dg 50 (61)
+....|+.++|.|...+.|.+. |.|++.+.
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 38 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQEN 38 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTC
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCC
Confidence 4456788899999999888664 99999653
No 485
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.15 E-value=0.00059 Score=43.01 Aligned_cols=40 Identities=10% Similarity=0.253 Sum_probs=29.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 10 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 10 ~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
+|.+...| ... +.+|+.++|.|.+.+. .+.++|++ ||..+
T Consensus 102 ~P~i~~~p-~~~-v~~G~~vtL~C~~~~~-~~~~~w~k-~g~~~ 141 (242)
T 1p6f_A 102 TPTLSVHP-GPE-VISGEKVTFYCRLDTA-TSMFLLLK-EGRSS 141 (242)
T ss_dssp CCEEEEES-CSE-EETTCEEEEEEECTTS-CSEEEEEE-CSSSC
T ss_pred CCceEccC-CCc-cCCCCcEEEEEecCCC-CCEEEEEE-CCCcc
Confidence 57777665 333 4578889999999985 57999998 55443
No 486
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=97.15 E-value=0.00064 Score=41.79 Aligned_cols=35 Identities=14% Similarity=0.355 Sum_probs=27.4
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. |..+.+..|..++|.|.+.+ +.+.|+|++.+
T Consensus 2 v~q~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~ 36 (238)
T 1bec_A 2 VTQS-PRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQD 36 (238)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEESS-CCSEEEEEEEC
T ss_pred cccC-CCeeEEeCCCcEEEEEEeCC-CCceEEEEEEC
Confidence 4555 45566778989999999965 78999999854
No 487
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.15 E-value=0.0005 Score=43.58 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=27.4
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEeccc--CCCeEEEEeC
Q psy11557 12 IFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 48 (61)
Q Consensus 12 ~f~~~Pp~~~~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 48 (61)
.+++ |+. +.+.+|..++|.|.+.|. |.+.|.|++.
T Consensus 3 ~v~q-p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (280)
T 3fku_X 3 QLVQ-SGA-EVKKPGSSVKVSCTSSEVTFSSFAISWVRQ 39 (280)
T ss_dssp CEEC-CCC-CEECTTCCEEEEEEECCSCCTTSCEEECCB
T ss_pred eEEc-CCC-EEECCCCcEEEEEEeeccCCCCeEEEEEEe
Confidence 3445 544 557789899999999997 6799999974
No 488
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=97.14 E-value=0.00026 Score=42.31 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=23.8
Q ss_pred EEecCCCCeEEEEEecccCCCeEEEEeCCC
Q psy11557 21 IDFSNTTGAQVECTARGSPNPEIIWIRSDG 50 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg 50 (61)
+....|++++|+|.+.+ |.|.|+|++.+.
T Consensus 5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~ 33 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKD 33 (171)
T ss_dssp EEEETTCCEEECCCCSS-CCSCEEEEETTE
T ss_pred EEEEcCCCEEEcCCCCC-CcceEEEEeCCc
Confidence 45567889999999966 999999998543
No 489
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.13 E-value=0.00087 Score=40.92 Aligned_cols=35 Identities=14% Similarity=0.457 Sum_probs=27.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEecccCCCeEEEEeCC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 49 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~d 49 (61)
+++. +..+.+..|..++|.|.+.+.+ +.|.|++.+
T Consensus 4 v~q~-p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~ 38 (207)
T 1ypz_E 4 VEQS-PSALSLHEGTDSALRCNFTTTM-RSVQWFRQN 38 (207)
T ss_dssp EEES-CSEEEEETTCCEEEEEEESSCC-SEEEEEEEC
T ss_pred cEEC-CCeEEEccCCcEEEEEEEeCCC-eEEEEEEeC
Confidence 3454 5556677898999999999865 699999853
No 490
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.12 E-value=0.00022 Score=42.50 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=24.7
Q ss_pred EEecCCCCeEEEEEecc--cCCCeEEEEeCCCeee
Q psy11557 21 IDFSNTTGAQVECTARG--SPNPEIIWIRSDGTAV 53 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G--~P~P~I~W~~~dg~~i 53 (61)
+...+|..++|.|.+.+ .|.|.|+|++ +|..|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k-~~~~i 39 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWER-GSTLV 39 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEE-TTEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEe-CCcee
Confidence 45567888999997655 7789999998 55443
No 491
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=97.11 E-value=0.00031 Score=43.54 Aligned_cols=30 Identities=10% Similarity=0.358 Sum_probs=24.0
Q ss_pred CcEEecCCCCeEEEEEecccCCCeEEEEeCCCeee
Q psy11557 19 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 19 ~~~~~~~g~~v~L~C~A~G~P~P~I~W~~~dg~~i 53 (61)
..+.+.+|+.++|.|.+.|. |+|++ +|..+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~----v~W~~-~~~~~ 37 (289)
T 3mjg_X 8 PELVLNVSSTFVLTCSGSAP----VVWER-MSQEP 37 (289)
T ss_dssp SEEECCTTCCEEEEEEESSC----CEEEB-TTBCC
T ss_pred CeEEEeCCCcEEEEEeccce----EEEEC-CCCCc
Confidence 44567789899999999995 99998 55543
No 492
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=97.11 E-value=0.00062 Score=41.98 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=27.4
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccC--CCeEEEEeCC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 49 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 49 (61)
+++|+. +.+..|..++|.|.+.|.| .+.|.|++.+
T Consensus 4 l~qp~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (232)
T 1dn0_B 4 LQQWGA-GLLKPSETLSLTCAVYGGSFSDYYWSWIRQP 40 (232)
T ss_dssp EEEECC-CEECTTSCEEEEEEEESSCCSSCCEEEEEEC
T ss_pred EECCCC-EEEeCCCcEEEEEEEccccCCCceEEEEEeC
Confidence 344444 4567888999999999986 7899999853
No 493
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=97.10 E-value=0.00018 Score=42.66 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=26.2
Q ss_pred EEecCCCCeEEEEEec----ccCCCeEEEEeCCCeee
Q psy11557 21 IDFSNTTGAQVECTAR----GSPNPEIIWIRSDGTAV 53 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~----G~P~P~I~W~~~dg~~i 53 (61)
+.+..|+.++|.|.+. |.|.|.+.|.+ +|..+
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~-~~~~i 39 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQK-EKKMV 39 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEE-TTEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEe-CCcEE
Confidence 4566788999999995 67899999998 66655
No 494
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=97.08 E-value=0.00044 Score=41.45 Aligned_cols=32 Identities=13% Similarity=0.354 Sum_probs=24.7
Q ss_pred CCcEEecCCCCeEEEEEe-cccC-CCeEEEEeCC
Q psy11557 18 PNRIDFSNTTGAQVECTA-RGSP-NPEIIWIRSD 49 (61)
Q Consensus 18 p~~~~~~~g~~v~L~C~A-~G~P-~P~I~W~~~d 49 (61)
|..+.+.+|+.++|.|.+ .+.| .|.|+|++.+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~ 40 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQL 40 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEEC
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeC
Confidence 345667889999999995 5553 6899999854
No 495
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.07 E-value=0.00018 Score=43.47 Aligned_cols=37 Identities=14% Similarity=0.383 Sum_probs=27.1
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEecccCC-C-eEEEEeCC
Q psy11557 11 PIFIKEPPNRIDFSNTTGAQVECTARGSPN-P-EIIWIRSD 49 (61)
Q Consensus 11 P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~-P-~I~W~~~d 49 (61)
+.+++ |.. +.+..|+.++|.|.+.|.|. + .|+|++.+
T Consensus 21 ~~v~~-p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 59 (234)
T 2j6e_L 21 SVLTQ-PPS-ASGTPGQRVTISCSGSSSNIGSNYVYWYQQL 59 (234)
T ss_dssp CCCBC-CSC-CCBCTTCEEEEEEECCTTTTTTSCCEEEEEC
T ss_pred cEEeC-CCc-EEeeCCCcEEEEEEecCCCCCCCeEEEEEec
Confidence 44445 444 45677888999999999764 5 79999853
No 496
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.07 E-value=0.00081 Score=37.48 Aligned_cols=33 Identities=21% Similarity=0.481 Sum_probs=26.2
Q ss_pred EcCCCcEEecCCCCeEEEEEeccc---CCCeEEEEeC
Q psy11557 15 KEPPNRIDFSNTTGAQVECTARGS---PNPEIIWIRS 48 (61)
Q Consensus 15 ~~Pp~~~~~~~g~~v~L~C~A~G~---P~P~I~W~~~ 48 (61)
.+|+. +...+|..++|.|...+. +.+.|.|++.
T Consensus 3 ~q~~~-~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq 38 (116)
T 3bj9_1 3 HQPPA-MSSALGTTIRLTCTLRNDHDIGVYSVYWYQQ 38 (116)
T ss_dssp ECCSE-EEEETTCCEEEEEEECSSSCGGGCCEEEEEE
T ss_pred ecCCc-EEEcCCCcEEEEEEeecCccCCCceEEEEEe
Confidence 34554 667889999999999865 6788999984
No 497
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.05 E-value=0.00059 Score=45.85 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=26.7
Q ss_pred CcceEEEcCCCcEEecCCCCeEEEEEecccCC---CeEEE
Q psy11557 9 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIW 45 (61)
Q Consensus 9 ~~P~f~~~Pp~~~~~~~g~~v~L~C~A~G~P~---P~I~W 45 (61)
.+|.+...|+....+..|..++|.|.|.|.|+ +.|+|
T Consensus 245 ~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 245 CHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred CCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE
Confidence 35555344455444567888999999999865 79999
No 498
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=97.04 E-value=0.00095 Score=37.66 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=27.5
Q ss_pred EEEcCCCcEEecCCCCeEEEEEeccc-CCCeEEEEeC
Q psy11557 13 FIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 48 (61)
Q Consensus 13 f~~~Pp~~~~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 48 (61)
|++.|.. +.+.+|..++|.|.+++. +...|.|++.
T Consensus 3 ~~q~p~~-v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq 38 (114)
T 2hp4_A 3 FRVSPLD-RTWNLGETVELKCQVLLSNPTSGASWLFQ 38 (114)
T ss_dssp EEEECCS-CCCCTTCCEEEEEEECCSSCCSCEEEEEE
T ss_pred cEeCCCE-EEEcCCCCEEEEEEeecCCCCceEEEEEE
Confidence 5677555 456788899999999965 4789999974
No 499
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=97.04 E-value=0.00034 Score=41.82 Aligned_cols=30 Identities=23% Similarity=0.429 Sum_probs=25.0
Q ss_pred EEecCCCCeEEEEEecccCC-----CeEEEEeCCC
Q psy11557 21 IDFSNTTGAQVECTARGSPN-----PEIIWIRSDG 50 (61)
Q Consensus 21 ~~~~~g~~v~L~C~A~G~P~-----P~I~W~~~dg 50 (61)
+.+..|+.++|.|.+.|.|. +.|+|++.+.
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~ 39 (222)
T 4i0k_A 5 VVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDT 39 (222)
T ss_dssp CCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTT
T ss_pred EEEECCCCeEEEEEecCCCCCCCCceEEEEEECCC
Confidence 44567889999999999976 8999999653
No 500
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=97.04 E-value=0.00079 Score=37.86 Aligned_cols=34 Identities=9% Similarity=0.138 Sum_probs=27.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEecccCCC----eEEEEeC
Q psy11557 14 IKEPPNRIDFSNTTGAQVECTARGSPNP----EIIWIRS 48 (61)
Q Consensus 14 ~~~Pp~~~~~~~g~~v~L~C~A~G~P~P----~I~W~~~ 48 (61)
++. +..+....|..++|.|...+.+.+ .|.|++.
T Consensus 6 v~~-p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~ 43 (128)
T 3r0n_A 6 VQV-LPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRP 43 (128)
T ss_dssp EEC-CSEEECCTTSCEEECCEEESCCTTCEEEEEEEECT
T ss_pred Eec-CCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEe
Confidence 444 445667789899999999998887 8999995
Done!