Query psy11558
Match_columns 74
No_of_seqs 113 out of 372
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 21:33:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11558.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11558hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3knb_B Obscurin-like protein 1 99.3 1.9E-11 6.4E-16 74.1 7.0 50 14-65 9-58 (107)
2 3knb_A Titin; IG-like, titin, 99.1 4.2E-11 1.4E-15 71.5 4.6 48 17-66 4-51 (100)
3 2v5m_A Dscam; neurobiology SPL 99.1 1.1E-10 3.8E-15 80.1 6.5 52 17-68 2-53 (388)
4 1g1c_A Immunoglobulin-like dom 99.1 5.9E-10 2E-14 64.3 7.7 49 16-66 3-51 (99)
5 3dmk_A DOWN syndrome cell adhe 99.1 1.8E-10 6.3E-15 86.7 6.3 56 14-69 34-89 (816)
6 3qp3_A Titin; I-SET IG-like, s 99.0 1.4E-09 4.7E-14 63.3 7.7 49 16-66 6-54 (103)
7 2kdg_A Myotilin; immonoglobuli 99.0 6.4E-10 2.2E-14 64.3 5.9 48 16-65 3-50 (100)
8 3caf_A Fibroblast growth facto 99.0 3.6E-10 1.2E-14 65.5 4.4 47 16-63 2-51 (100)
9 1u2h_A APEG-1, aortic preferen 99.0 2E-09 6.8E-14 62.0 7.3 47 16-64 3-49 (99)
10 3puc_A Titin; I-SET IG-like do 99.0 2.9E-09 9.9E-14 61.2 7.5 49 15-65 3-51 (99)
11 2cqv_A MLCK, myosin light chai 99.0 1.3E-09 4.5E-14 64.8 6.1 49 15-65 4-52 (114)
12 2v9t_A Roundabout homolog 1; s 99.0 9.8E-10 3.3E-14 65.5 5.5 48 14-63 5-52 (117)
13 3kld_A Contactin 4, axcam, BIG 99.0 1E-09 3.4E-14 76.7 6.0 50 16-66 3-54 (384)
14 1wit_A Twitchin 18TH IGSF modu 99.0 1.4E-09 4.7E-14 62.7 5.4 44 18-63 2-47 (93)
15 2dm3_A KIAA0992 protein, palla 98.9 2.3E-09 7.8E-14 63.0 5.6 50 14-65 5-54 (110)
16 2edj_A Roundabout homolog 2; K 98.9 4.9E-09 1.7E-13 60.7 6.8 46 15-62 5-50 (100)
17 3irg_B Obscurin-like protein 1 98.9 5.6E-09 1.9E-13 60.8 7.0 49 14-64 9-57 (107)
18 2dm2_A Palladin; beta-sandwich 98.9 3.3E-09 1.1E-13 62.5 5.9 48 14-63 4-51 (110)
19 2yr3_A Myosin light chain kina 98.9 2.6E-09 8.8E-14 61.8 5.3 48 14-63 7-54 (99)
20 3irg_A Titin; IG-like, titin, 98.9 4.2E-09 1.4E-13 60.3 5.3 45 17-63 4-48 (100)
21 3bfo_A Mucosa-associated lymph 98.9 1.9E-08 6.5E-13 57.7 8.0 46 17-64 2-47 (91)
22 2lvc_A Obscurin-like protein 1 98.8 3.4E-09 1.2E-13 62.8 4.7 48 18-67 3-52 (91)
23 3qr2_A Basigin; CD147, EMMPRIN 98.8 5.3E-09 1.8E-13 64.1 5.6 46 13-60 16-61 (137)
24 2kkq_A Myotilin; unknown funct 98.8 5.8E-09 2E-13 63.0 5.5 47 15-63 12-58 (116)
25 2bk8_A Connectin, M1, titin he 98.8 2E-08 6.8E-13 58.0 7.3 44 21-65 3-47 (97)
26 2e7c_A Myosin-binding protein 98.8 7.6E-09 2.6E-13 61.9 5.6 47 15-62 18-66 (118)
27 1fhg_A Telokin; immunoglobulin 98.8 1.8E-08 6.1E-13 63.2 7.4 49 15-65 38-86 (154)
28 2cr6_A KIAA1556 protein, obscu 98.8 5.2E-09 1.8E-13 62.7 4.6 44 19-64 14-57 (115)
29 2yuv_A Myosin-binding protein 98.8 2.2E-08 7.5E-13 58.3 7.2 48 16-65 5-52 (100)
30 1waa_A Titin; metal binding pr 98.8 2E-08 6.7E-13 59.2 7.0 48 16-66 3-50 (93)
31 1nct_A Titin; cell adhesion, g 98.8 4.9E-09 1.7E-13 62.4 4.3 51 13-65 9-59 (106)
32 2eo9_A Roundabout homolog 1; b 98.8 7.3E-09 2.5E-13 61.9 5.0 48 14-63 4-51 (118)
33 1itb_B Type 1 interleukin-1 re 98.8 5.2E-08 1.8E-12 65.2 8.8 50 16-66 206-255 (315)
34 1pd6_A Cardiac MYBP-C;, myosin 98.8 9.9E-09 3.4E-13 61.4 4.6 49 14-64 11-59 (104)
35 3kvq_A Vascular endothelial gr 98.7 6.9E-09 2.4E-13 60.5 3.6 46 16-63 8-53 (108)
36 2yd6_A PTPRD protein; hydrolas 98.7 2.3E-08 8E-13 64.1 6.3 48 14-63 2-49 (212)
37 2e6p_A Obscurin-like protein 1 98.7 1.3E-08 4.4E-13 59.4 4.7 49 15-65 4-54 (104)
38 2yd1_A Tyrosine-protein phosph 98.7 6.9E-08 2.4E-12 61.7 8.2 46 15-62 3-48 (212)
39 2ckn_A Basic fibroblast growth 98.7 1.1E-08 3.7E-13 59.3 4.0 46 15-63 6-51 (95)
40 3cx2_A Myosin-binding protein 98.7 2E-08 6.8E-13 59.5 5.1 40 17-57 3-45 (108)
41 4fa8_A Secreted protein BARF1; 98.7 4.1E-09 1.4E-13 69.6 1.9 44 17-61 105-148 (203)
42 2r15_A Myomesin-1; sarcomeric 98.7 9.6E-08 3.3E-12 60.3 8.2 47 18-65 116-162 (212)
43 2dlt_A Myosin binding protein 98.7 3.9E-08 1.3E-12 57.8 5.9 48 15-65 5-52 (106)
44 1cs6_A Axonin-1; neural cell a 98.7 2.9E-08 9.8E-13 68.1 5.8 50 16-66 2-53 (382)
45 1x44_A Myosin-binding protein 98.7 1.5E-08 5.1E-13 59.3 3.8 46 17-65 5-51 (103)
46 3lcy_A Titin; A-BAND, IG tande 98.7 1.1E-07 3.6E-12 59.1 7.8 48 15-64 4-51 (197)
47 2rik_A Titin; I-SET IG fold, p 98.7 1.2E-07 4E-12 62.4 8.4 49 16-66 3-51 (284)
48 2j8h_A Titin, connectin; cardi 98.7 1.4E-07 4.7E-12 59.1 8.2 46 16-63 2-47 (197)
49 3mtr_A N-CAM-1, NCAM-1, neural 98.7 7.9E-08 2.7E-12 61.7 7.1 49 13-64 14-62 (215)
50 2lu7_A Obscurin-like protein 1 98.7 2.8E-08 9.5E-13 58.0 4.5 40 26-67 3-42 (84)
51 2a38_A Titin; Z1Z2, structural 98.7 5.8E-08 2E-12 60.5 6.2 47 16-64 3-49 (194)
52 2edk_A Myosin-binding protein 98.7 3.1E-08 1.1E-12 57.8 4.5 47 16-65 6-52 (101)
53 2e7b_A Obscurin; IG-like domai 98.7 3.8E-08 1.3E-12 57.3 4.9 45 16-63 6-50 (103)
54 2ens_A Advanced glycosylation 98.6 1.9E-08 6.5E-13 58.2 3.5 49 14-64 6-54 (96)
55 2yuz_A Myosin-binding protein 98.6 4.5E-08 1.5E-12 58.1 5.2 48 15-66 4-51 (100)
56 3b43_A Titin; I-SET IG fold, e 98.6 8.3E-08 2.8E-12 70.4 7.6 50 15-66 2-51 (570)
57 2nzi_A Titin; IG-domain, FNIII 98.6 1.7E-07 5.9E-12 62.2 8.4 46 16-63 2-47 (305)
58 3so5_A LIG-3, leucine-rich rep 98.6 1.7E-07 5.9E-12 53.8 7.1 46 16-63 8-55 (112)
59 3rbs_A Myomesin-1; immunoglobu 98.6 8.4E-08 2.9E-12 62.9 6.4 43 18-63 117-160 (207)
60 2vr9_A Roundabout 1, ROBO; imm 98.6 1.1E-07 3.7E-12 60.6 6.7 48 14-63 5-52 (217)
61 2c5d_C AXL oncogene, tyrosine- 98.6 7.4E-08 2.5E-12 60.6 5.7 46 17-64 1-47 (195)
62 2yd9_A Receptor-type tyrosine- 98.6 6.4E-08 2.2E-12 64.8 5.7 46 15-62 3-48 (304)
63 2edf_A Obscurin; beta-sandwich 98.6 5.7E-08 2E-12 56.5 4.8 47 16-65 6-52 (103)
64 2k1m_A Myosin-binding protein 98.6 8.7E-08 3E-12 55.4 5.3 48 16-66 6-53 (95)
65 1wwb_X Protein (brain derived 98.6 9.8E-08 3.4E-12 56.5 5.6 31 34-65 16-46 (103)
66 2y25_A Myomesin; structural pr 98.6 1.5E-07 5E-12 62.6 6.9 47 17-64 220-266 (317)
67 2cry_A KIN of IRRE-like protei 98.6 3.1E-08 1.1E-12 59.5 2.8 45 16-63 12-57 (122)
68 2iep_A Muscle-specific kinase 98.6 1.3E-07 4.3E-12 58.9 5.6 47 15-63 4-50 (192)
69 2v9r_A Roundabout homolog 1; p 98.6 1.4E-07 4.9E-12 59.3 5.8 47 15-63 6-52 (212)
70 1gl4_B Basement membrane-speci 98.5 1.6E-07 5.6E-12 54.1 5.6 41 17-57 8-49 (98)
71 3p3y_A Neurofascin; IG domains 98.5 5.6E-08 1.9E-12 66.6 4.1 47 15-62 13-59 (404)
72 1he7_A High affinity nerve gro 98.5 1.7E-07 6E-12 59.5 6.0 33 34-67 15-47 (126)
73 3ojm_B Fibroblast growth facto 98.5 5.6E-08 1.9E-12 61.8 3.6 52 11-63 8-62 (231)
74 1rhf_A Tyrosine-protein kinase 98.5 1.3E-07 4.3E-12 58.8 5.1 45 18-64 2-46 (182)
75 3kld_A Contactin 4, axcam, BIG 98.5 1.8E-07 6E-12 65.2 6.3 46 17-64 294-339 (384)
76 2wv3_A Neuroplastin; igcam, me 98.5 3.6E-07 1.2E-11 57.3 7.1 45 17-62 91-136 (190)
77 3m45_A Cell adhesion molecule 98.5 1.3E-07 4.5E-12 54.5 4.6 42 16-58 4-45 (108)
78 2v5t_A NCAM2, N-CAM 2, neural 98.5 2.6E-07 8.9E-12 57.1 6.2 46 18-65 2-47 (189)
79 1gxe_A Myosin binding protein 98.5 5.6E-08 1.9E-12 61.7 3.1 32 26-57 25-56 (139)
80 2eny_A Obscurin; beta-sandwich 98.5 7.2E-08 2.5E-12 57.3 3.3 47 18-66 8-55 (104)
81 2dku_A KIAA1556 protein; beta- 98.5 1.1E-07 3.8E-12 55.3 4.0 47 15-64 5-51 (103)
82 1rhf_A Tyrosine-protein kinase 98.5 5.4E-07 1.8E-11 55.8 7.4 45 17-63 97-142 (182)
83 1epf_A NCAM, protein (neural c 98.5 2.8E-07 9.5E-12 57.4 6.1 45 17-63 99-143 (191)
84 2yd6_A PTPRD protein; hydrolas 98.5 5.3E-07 1.8E-11 57.7 7.5 46 17-64 107-152 (212)
85 2va4_A NCAM2, N-CAM 2, neural 98.5 3E-07 1E-11 57.0 5.9 46 18-64 2-48 (192)
86 2c5d_C AXL oncogene, tyrosine- 98.5 8.4E-07 2.9E-11 55.6 8.0 47 16-64 104-151 (195)
87 2a38_A Titin; Z1Z2, structural 98.5 8.4E-07 2.9E-11 55.2 7.9 47 17-65 102-148 (194)
88 1wwc_A Protein (NT-3 growth fa 98.5 1.8E-07 6.3E-12 55.8 4.5 44 17-65 7-50 (118)
89 1bih_A Hemolin; insect immunit 98.5 2.3E-07 7.8E-12 63.5 5.3 46 17-63 307-352 (395)
90 2rik_A Titin; I-SET IG fold, p 98.5 1E-06 3.5E-11 57.9 8.2 50 16-66 96-145 (284)
91 3s35_X Vascular endothelial gr 98.5 4E-07 1.4E-11 54.2 5.8 40 19-58 8-49 (122)
92 1vca_A VCAM-D1,2, human vascul 98.5 4.1E-07 1.4E-11 59.0 6.2 38 21-58 3-40 (202)
93 4fqp_A Poliovirus receptor; im 98.5 2.9E-07 1E-11 61.9 5.6 44 17-61 215-259 (313)
94 3s97_C Contactin-1; carbonic a 98.4 8.8E-07 3E-11 55.1 7.4 45 16-62 111-155 (201)
95 3grw_A Fibroblast growth facto 98.4 1.3E-07 4.3E-12 60.9 3.6 48 15-63 8-58 (241)
96 3k0w_A Mucosa-associated lymph 98.4 7.9E-07 2.7E-11 57.3 7.4 50 13-64 13-62 (218)
97 2cr3_A Basic fibroblast growth 98.4 1.1E-07 3.9E-12 55.4 3.1 37 25-63 9-45 (99)
98 2yd9_A Receptor-type tyrosine- 98.4 4E-07 1.4E-11 60.9 5.7 45 17-63 204-248 (304)
99 2edn_A Myosin-binding protein 98.4 1.1E-07 3.9E-12 59.6 2.8 43 12-55 6-51 (118)
100 3rbg_A Cytotoxic and regulator 98.4 2.3E-07 7.9E-12 56.2 3.9 40 22-61 4-43 (124)
101 2e6q_A Obscurin-like protein 1 98.4 4E-07 1.4E-11 56.3 5.0 44 18-65 8-51 (112)
102 2y25_A Myomesin; structural pr 98.4 5.9E-07 2E-11 59.6 5.9 48 15-65 4-52 (317)
103 2dav_A SLOW MYBP-C, myosin-bin 98.4 2.4E-07 8.3E-12 58.7 3.6 37 18-55 7-46 (126)
104 2jll_A NCAM2, neural cell adhe 98.4 9E-07 3.1E-11 60.6 6.7 44 18-63 1-45 (389)
105 2yd1_A Tyrosine-protein phosph 98.4 3.7E-06 1.3E-10 53.6 9.2 44 18-63 110-153 (212)
106 2cpc_A KIAA0657 protein; immun 98.4 1.3E-06 4.4E-11 51.3 6.5 50 14-65 6-57 (113)
107 2v44_A NCAM2, neural cell adhe 98.4 6E-07 2E-11 55.9 5.1 44 17-62 95-138 (189)
108 3b43_A Titin; I-SET IG fold, e 98.4 1.2E-06 4.1E-11 64.3 7.5 52 16-68 288-339 (570)
109 3p3y_A Neurofascin; IG domains 98.3 8E-07 2.7E-11 60.8 5.9 46 17-64 311-356 (404)
110 3k0w_A Mucosa-associated lymph 98.3 2.8E-06 9.5E-11 54.7 8.2 45 18-64 118-162 (218)
111 2edh_A Obscurin; structural ge 98.3 1.2E-06 4.2E-11 51.6 6.0 44 17-64 18-61 (113)
112 2dm7_A KIAA1556 protein; beta- 98.3 5.9E-07 2E-11 52.5 4.5 45 15-63 5-49 (108)
113 1qz1_A Neural cell adhesion mo 98.3 1.9E-06 6.6E-11 56.6 7.3 45 18-63 2-47 (291)
114 2id5_A Lingo-1, leucine rich r 98.3 2.9E-07 1E-11 65.9 3.5 47 14-61 380-426 (477)
115 2fbo_J V1V2;, variable region- 98.3 5.7E-07 2E-11 58.0 4.6 44 18-62 135-178 (250)
116 1epf_A NCAM, protein (neural c 98.3 8.4E-07 2.9E-11 55.2 5.1 44 18-62 2-46 (191)
117 2iep_A Muscle-specific kinase 98.3 1.4E-06 4.7E-11 54.1 6.1 46 17-64 99-144 (192)
118 2j8h_A Titin, connectin; cardi 98.3 7.4E-07 2.5E-11 55.7 4.9 37 28-65 113-149 (197)
119 2v5m_A Dscam; neurobiology SPL 98.3 1.1E-06 3.8E-11 60.1 6.1 45 17-63 306-350 (388)
120 1cs6_A Axonin-1; neural cell a 98.3 1.6E-06 5.3E-11 59.4 6.7 46 17-64 293-338 (382)
121 1bih_A Hemolin; insect immunit 98.3 7.2E-07 2.5E-11 61.0 5.0 49 15-65 3-52 (395)
122 4hwu_A Fibroblast growth facto 98.3 1.4E-06 4.9E-11 49.9 5.1 39 24-65 6-44 (95)
123 2v5t_A NCAM2, N-CAM 2, neural 98.3 1.5E-06 5E-11 53.7 5.5 46 18-64 96-142 (189)
124 3rjd_A High affinity immunoglo 98.3 1.7E-06 5.8E-11 55.9 5.8 44 18-63 1-45 (262)
125 3ry4_A Low affinity immunoglob 98.3 3.1E-06 1.1E-10 51.9 6.7 48 17-66 3-51 (170)
126 3laf_A Deleted in colorectal c 98.3 2.9E-06 1E-10 58.1 7.2 50 13-64 16-66 (403)
127 3grw_A Fibroblast growth facto 98.3 3.7E-06 1.3E-10 54.0 7.2 47 17-63 112-161 (241)
128 1qz1_A Neural cell adhesion mo 98.3 2.4E-06 8.1E-11 56.2 6.4 45 17-63 99-143 (291)
129 3nl4_L Antigen binding fragmen 98.3 1.3E-06 4.4E-11 55.5 4.9 45 16-62 112-157 (213)
130 3laf_A Deleted in colorectal c 98.3 1.9E-06 6.5E-11 59.0 6.1 45 17-63 311-355 (403)
131 2eo1_A OBSCN protein, cDNA FLJ 98.3 7.5E-07 2.6E-11 51.6 3.5 46 18-65 8-55 (102)
132 3s97_C Contactin-1; carbonic a 98.3 6E-07 2E-11 55.8 3.2 43 18-61 7-51 (201)
133 3sbw_C Programmed cell death 1 98.2 1.4E-06 4.8E-11 55.3 5.0 32 31-62 128-159 (222)
134 2wv3_A Neuroplastin; igcam, me 98.2 2.4E-06 8.2E-11 53.5 5.9 44 17-63 2-48 (190)
135 1jhl_L IGG1-kappa D11.15 FV (l 98.2 1.6E-06 5.4E-11 51.1 4.6 36 21-57 4-39 (108)
136 1nbq_A JAM, junctional adhesio 98.2 8.4E-07 2.9E-11 55.4 3.5 41 19-59 4-44 (209)
137 3sgj_C Human FCG3A receptor; r 98.2 2.6E-06 8.9E-11 55.2 5.9 47 16-64 5-52 (204)
138 2jll_A NCAM2, neural cell adhe 98.2 2.7E-06 9.2E-11 58.2 6.0 47 17-65 99-145 (389)
139 3lcy_A Titin; A-BAND, IG tande 98.2 4.5E-06 1.5E-10 51.6 6.6 38 27-65 111-148 (197)
140 3b5h_A Cervical EMMPRIN, HAB18 98.2 4.1E-06 1.4E-10 52.0 6.3 45 17-62 82-130 (184)
141 3ojm_B Fibroblast growth facto 98.2 3.8E-06 1.3E-10 53.2 6.0 45 18-62 117-164 (231)
142 2v44_A NCAM2, neural cell adhe 98.2 5.8E-06 2E-10 51.4 6.6 44 20-65 4-47 (189)
143 1f97_A Junction adhesion molec 98.2 1.9E-06 6.5E-11 53.9 4.4 37 23-59 5-41 (212)
144 3qs7_E FL cytokine receptor; i 98.2 2.1E-06 7.2E-11 61.7 5.1 47 17-64 323-370 (423)
145 3rbs_A Myomesin-1; immunoglobu 98.2 2.5E-06 8.7E-11 55.8 5.1 46 18-66 3-49 (207)
146 3zyj_A Leucine-rich repeat-con 98.2 4E-06 1.4E-10 59.9 6.4 49 14-64 337-385 (440)
147 2y23_A Myomesin; structural pr 98.2 3.1E-06 1.1E-10 56.0 5.3 47 18-65 106-153 (312)
148 4fom_A Poliovirus receptor-rel 98.2 7.5E-07 2.6E-11 59.5 2.2 43 16-58 209-252 (308)
149 3p2t_A Leukocyte immunoglobuli 98.1 4.2E-06 1.4E-10 53.0 5.6 42 16-61 3-44 (196)
150 1fnl_A Low affinity immunoglob 98.1 6.2E-06 2.1E-10 51.4 6.3 47 15-63 4-51 (175)
151 3uto_A Twitchin; kinase, muscl 98.1 8.3E-06 2.8E-10 61.6 8.0 50 16-67 480-529 (573)
152 2wim_A N-CAM 2, NCAM2, neural 98.1 1.4E-06 4.6E-11 57.3 3.2 34 30-64 205-238 (291)
153 2pet_A Lutheran blood group gl 98.1 8.4E-06 2.9E-10 51.8 6.7 46 18-65 118-165 (231)
154 3d9a_L Light chain of hyhel10 98.1 3.5E-06 1.2E-10 53.4 4.7 35 21-56 4-38 (213)
155 2rgs_A I, IG gamma-2B heavy ch 98.1 4.3E-06 1.5E-10 54.4 5.3 45 16-62 115-161 (218)
156 2wim_A N-CAM 2, NCAM2, neural 98.1 7.3E-06 2.5E-10 53.8 6.4 47 17-65 3-49 (291)
157 2rgs_A I, IG gamma-2B heavy ch 98.1 2.1E-06 7.1E-11 55.9 3.6 47 15-62 6-57 (218)
158 3r08_E T-cell surface glycopro 98.1 1.9E-06 6.3E-11 51.2 2.9 35 25-63 6-40 (82)
159 3sob_L Antibody light chain; b 98.1 5.1E-06 1.8E-10 53.2 5.2 40 16-56 22-61 (237)
160 3u83_A Poliovirus receptor-rel 98.1 3.2E-06 1.1E-10 56.7 4.4 44 17-61 230-274 (331)
161 3nl4_L Antigen binding fragmen 98.1 5.2E-06 1.8E-10 52.6 5.1 37 19-56 2-38 (213)
162 2y23_A Myomesin; structural pr 98.1 4.9E-06 1.7E-10 55.0 5.2 42 18-62 222-264 (312)
163 2d3v_A Leukocyte immunoglobuli 98.1 6.1E-06 2.1E-10 52.3 5.5 42 16-61 3-44 (196)
164 3ejj_X Macrophage colony-stimu 98.1 9.8E-06 3.3E-10 53.1 6.5 45 17-63 185-230 (289)
165 2v9r_A Roundabout homolog 1; p 98.1 6.1E-06 2.1E-10 51.7 5.2 37 27-64 119-156 (212)
166 1l6x_A Immunoglobulin gamma-1 98.1 4E-06 1.4E-10 53.9 4.3 43 19-62 2-49 (207)
167 2ifg_A High affinity nerve gro 98.1 3.4E-06 1.2E-10 58.2 4.2 44 15-59 155-198 (347)
168 1ry7_B FGFR-3, fibroblast grow 98.1 1.2E-06 4.1E-11 59.0 1.8 45 18-62 221-268 (334)
169 3mjg_X Beta-type platelet-deri 98.1 5.3E-06 1.8E-10 54.7 4.9 38 17-55 180-217 (289)
170 2vr9_A Roundabout 1, ROBO; imm 98.0 4E-06 1.4E-10 53.1 3.9 44 18-63 108-152 (217)
171 4dzb_B Vbeta2 (MAIT T cell rec 98.0 2E-06 7E-11 55.9 2.6 45 18-63 124-170 (246)
172 3bp6_B Programmed cell death 1 98.0 1.1E-05 3.7E-10 50.8 5.8 39 22-60 5-48 (202)
173 2o26_X MAST/stem cell growth f 98.0 5.4E-06 1.8E-10 54.8 4.5 42 17-59 187-229 (290)
174 3r06_A Anti-mouse CD3epsilon a 98.0 8.3E-06 2.8E-10 51.7 5.2 37 19-56 2-38 (213)
175 2gi7_A GPVI protein; IG-like d 98.0 1.4E-05 4.6E-10 50.5 6.2 41 15-59 5-45 (184)
176 2q20_A VK1 O18/O8 germline lig 98.0 7.2E-06 2.5E-10 48.5 4.6 38 19-57 4-41 (109)
177 1e07_A Carcinoembryonic antige 98.0 7.6E-06 2.6E-10 60.0 5.6 42 20-63 561-602 (642)
178 2x1w_L Vascular endothelial gr 98.0 1.1E-05 3.7E-10 51.9 5.7 43 17-60 103-147 (213)
179 1bec_A 14.3.D T cell antigen r 98.0 5.2E-06 1.8E-10 54.4 4.3 45 18-63 120-166 (238)
180 3dmk_A DOWN syndrome cell adhe 98.0 2.9E-05 9.8E-10 58.5 8.8 49 16-66 427-475 (816)
181 3v2a_R Vascular endothelial gr 98.0 7E-07 2.4E-11 66.1 0.0 47 16-64 664-710 (772)
182 4frw_A Poliovirus receptor-rel 98.0 5.9E-06 2E-10 51.2 4.3 34 27-61 126-159 (218)
183 4i0k_A CD276 antigen; immunogl 98.0 8.7E-06 3E-10 51.7 5.1 43 18-62 111-154 (222)
184 2wng_A Tyrosine-protein phosph 98.0 7.2E-06 2.5E-10 55.4 4.7 37 20-57 5-42 (327)
185 3bqu_C 3H6 FAB light chain; be 98.0 2.7E-06 9.2E-11 54.8 2.5 41 16-57 21-61 (233)
186 1lk3_L 9D7 light chain; antige 98.0 1.1E-05 3.8E-10 51.2 5.3 31 26-56 7-37 (210)
187 2oz4_A Intercellular adhesion 98.0 1.1E-06 3.9E-11 57.9 0.7 33 26-58 192-224 (265)
188 3mj8_L Stimulatory hamster ant 98.0 5.9E-06 2E-10 52.4 4.0 45 17-63 113-159 (213)
189 1ugn_A LIR1, leukocyte immunog 98.0 1.2E-05 4.1E-10 50.9 5.5 42 16-61 3-44 (198)
190 3tv3_L PGT128 light chain, IG 98.0 7.1E-06 2.4E-10 52.0 4.3 45 17-63 110-156 (211)
191 1f2q_A High affinity immunoglo 98.0 5.3E-06 1.8E-10 51.7 3.6 46 16-63 2-48 (176)
192 1qfw_M FV, antibody (anti beta 98.0 9.1E-06 3.1E-10 48.0 4.4 35 22-57 5-39 (108)
193 3esu_F Antibody 14B7* light ch 98.0 1.2E-05 4E-10 52.4 5.3 37 19-56 5-41 (250)
194 1z7z_I Intercellular adhesion 98.0 2E-06 6.8E-11 60.4 1.6 42 17-58 367-409 (450)
195 1lk3_L 9D7 light chain; antige 98.0 7.1E-06 2.4E-10 52.2 4.1 44 18-63 111-156 (210)
196 2xot_A Amphoterin-induced prot 98.0 6.2E-06 2.1E-10 57.9 4.1 36 26-62 253-288 (361)
197 1dr9_A B7-1 (CD80), T lymphocy 98.0 1.6E-05 5.6E-10 50.0 5.7 30 33-63 120-150 (201)
198 1i8k_A Epidermal growth factor 98.0 9.2E-06 3.2E-10 47.9 4.3 36 21-57 4-39 (107)
199 3r4d_A CEA-related cell adhesi 98.0 5.3E-05 1.8E-09 47.5 8.1 42 18-64 112-153 (208)
200 1ow0_A IG alpha-1 chain C regi 98.0 9.5E-06 3.3E-10 52.6 4.6 47 16-63 104-152 (214)
201 1hng_A CD2; T lymphocyte adhes 98.0 1.1E-05 3.7E-10 51.2 4.7 31 34-65 110-140 (176)
202 2d3v_A Leukocyte immunoglobuli 98.0 7.2E-06 2.5E-10 52.0 3.9 40 18-61 100-139 (196)
203 1c1e_H Catalytic antibody 1E9 97.9 5.7E-06 2E-10 52.9 3.4 41 18-60 124-166 (219)
204 2fbo_J V1V2;, variable region- 97.9 7.9E-06 2.7E-10 52.5 4.1 37 21-57 4-43 (250)
205 2ghw_B Anti-SARS SCFV antibody 97.9 1.9E-05 6.4E-10 51.3 5.8 38 18-56 135-172 (247)
206 3bkj_L WO2 IGG2A FAB fragment 97.9 1.4E-05 4.7E-10 52.5 5.1 41 16-57 32-77 (252)
207 2p1y_A Bispecific alpha/beta T 97.9 1.1E-05 3.7E-10 52.1 4.5 37 20-57 129-165 (238)
208 1q0x_L FAB 9B1, light chain; a 97.9 1E-05 3.6E-10 51.3 4.4 45 17-63 114-160 (212)
209 3zyi_A Leucine-rich repeat-con 97.9 5.7E-06 1.9E-10 59.3 3.4 47 15-64 349-395 (452)
210 3d9a_L Light chain of hyhel10 97.9 7.8E-06 2.7E-10 51.8 3.7 45 18-64 112-158 (213)
211 3qs9_E FL cytokine receptor; i 97.9 1.1E-05 3.7E-10 59.8 5.0 47 17-64 323-370 (527)
212 1z9m_A GAPA225; nectin-like, I 97.9 1.5E-05 5.1E-10 49.1 4.9 36 21-57 41-76 (145)
213 3r06_A Anti-mouse CD3epsilon a 97.9 1.2E-05 4E-10 51.0 4.5 46 16-63 110-157 (213)
214 2xzc_L FAB A.17 light chain; i 97.9 7.4E-06 2.5E-10 52.3 3.5 45 17-63 113-159 (216)
215 1mqk_L Antibody 7E2 FV fragmen 97.9 1.4E-05 4.8E-10 48.5 4.6 36 21-57 4-39 (120)
216 2vol_A Murine IGG FC; FC, zinc 97.9 1.3E-05 4.4E-10 51.5 4.7 45 16-62 107-153 (207)
217 3s96_B 3B5H10 FAB light chain; 97.9 8.9E-06 3E-10 51.6 3.8 45 17-63 120-166 (218)
218 1dee_B IGM RF 2A2; FAB-IBP com 97.9 2.9E-05 9.9E-10 50.4 6.3 32 32-63 139-172 (223)
219 1uct_A Immunoglobulin alpha FC 97.9 8.4E-06 2.9E-10 53.5 3.8 42 16-61 7-48 (218)
220 1l6x_A Immunoglobulin gamma-1 97.9 1.6E-05 5.5E-10 51.0 5.0 45 16-62 107-153 (207)
221 1z7z_I Intercellular adhesion 97.9 1.5E-05 5.1E-10 55.9 5.2 44 18-62 85-131 (450)
222 2va4_A NCAM2, N-CAM 2, neural 97.9 2.2E-05 7.4E-10 48.4 5.3 44 17-62 94-138 (192)
223 1nfd_E H57 FAB; complex (immun 97.9 4E-06 1.4E-10 53.3 2.0 45 17-63 112-158 (212)
224 3qs9_E FL cytokine receptor; i 97.9 1.4E-05 4.6E-10 59.3 5.1 38 25-63 233-271 (527)
225 3q5y_A TCR N15 beta; IG, T cel 97.9 6.4E-06 2.2E-10 53.5 3.0 46 17-63 120-167 (240)
226 2wng_A Tyrosine-protein phosph 97.9 1.2E-05 4.2E-10 54.2 4.4 43 16-62 220-264 (327)
227 2e27_L Anti-ciguatoxin antibod 97.9 1.5E-05 5.3E-10 48.3 4.5 37 20-57 5-41 (119)
228 1hzh_H IGG, immunoglobulin hea 97.9 1.3E-05 4.6E-10 56.7 4.8 45 16-62 353-399 (457)
229 2rcj_C Light chain; immunoglob 97.9 1.8E-05 6.1E-10 56.7 5.4 45 16-62 423-469 (523)
230 4ei6_B Vbeta16 XV19 type II na 97.9 6.9E-06 2.4E-10 53.3 3.0 45 18-63 123-169 (245)
231 2w59_A IGY FCU3-4; immunoglobu 97.9 6.7E-06 2.3E-10 54.1 2.9 45 16-61 10-57 (231)
232 1nbq_A JAM, junctional adhesio 97.9 7.9E-06 2.7E-10 50.9 3.1 33 30-63 118-151 (209)
233 2znx_A SCFV; fluorotryptohpan, 97.9 2.1E-05 7.1E-10 51.6 5.2 37 20-57 3-39 (242)
234 2nzi_A Titin; IG-domain, FNIII 97.9 2.8E-05 9.4E-10 51.5 5.9 36 28-64 113-148 (305)
235 1nkr_A P58-CL42 KIR; inhibitor 97.9 1.8E-05 6.1E-10 50.4 4.8 42 16-61 6-47 (201)
236 2ifg_A High affinity nerve gro 97.9 1.4E-05 4.7E-10 55.1 4.5 32 33-65 260-291 (347)
237 1gsm_A Madcam-1, mucosal addre 97.9 3.5E-05 1.2E-09 52.2 6.4 38 18-57 6-46 (210)
238 4f80_A Butyrophilin subfamily 97.9 9.5E-06 3.3E-10 52.2 3.4 34 29-62 128-162 (226)
239 4fmk_A Poliovirus receptor-rel 97.9 2.1E-05 7.3E-10 48.9 4.9 39 22-61 5-46 (225)
240 3pl6_D MBP peptide / T-cell re 97.9 5.4E-06 1.8E-10 54.8 2.2 45 18-63 145-191 (268)
241 4frw_A Poliovirus receptor-rel 97.9 1.6E-05 5.5E-10 49.3 4.3 33 25-57 5-40 (218)
242 2ec8_A MAST/stem cell growth f 97.9 1.9E-05 6.6E-10 56.5 5.3 48 17-65 309-359 (524)
243 3qib_D 2B4 beta chain; IG doma 97.9 6.3E-06 2.2E-10 54.6 2.5 45 18-63 148-194 (270)
244 2ny1_B T-cell surface glycopro 97.9 1.7E-05 5.8E-10 49.4 4.3 29 30-58 108-136 (184)
245 2wqr_A IG epsilon chain C regi 97.9 1.5E-05 5.2E-10 54.1 4.4 46 18-63 112-161 (323)
246 1pz5_B Heavy chain of FAB (SYA 97.9 1.6E-05 5.4E-10 51.0 4.3 41 17-58 124-166 (220)
247 1e07_A Carcinoembryonic antige 97.9 1.9E-05 6.4E-10 57.9 5.1 36 27-63 389-424 (642)
248 1q9r_B S25-2 FAB (IGG1K) heavy 97.8 1.1E-05 3.9E-10 51.7 3.5 42 18-61 127-170 (222)
249 1f97_A Junction adhesion molec 97.8 1.3E-05 4.4E-10 50.1 3.6 33 30-63 115-149 (212)
250 1oll_A NK receptor; immune sys 97.8 5.4E-05 1.8E-09 47.8 6.5 41 17-61 3-43 (188)
251 2jju_A Signal regulatory prote 97.8 2.6E-05 8.8E-10 47.4 4.8 37 22-58 6-43 (127)
252 2yz1_A Tyrosine-protein phosph 97.8 2.8E-05 9.4E-10 46.3 4.8 36 23-58 11-47 (120)
253 2v5y_A Receptor-type tyrosine- 97.8 4.5E-05 1.5E-09 57.6 7.0 44 17-62 164-209 (731)
254 2vol_A Murine IGG FC; FC, zinc 97.8 1.7E-05 6E-10 50.9 4.2 40 20-61 4-48 (207)
255 3b5h_A Cervical EMMPRIN, HAB18 97.8 2.1E-05 7.2E-10 48.7 4.4 34 31-65 10-45 (184)
256 3qs7_E FL cytokine receptor; i 97.8 1.8E-05 6.3E-10 56.8 4.7 39 19-58 49-87 (423)
257 3to4_D NKT vbeta2 (mouse varia 97.8 7.5E-06 2.6E-10 54.0 2.5 46 17-63 122-169 (253)
258 2wbj_D OB TCR; transmembrane, 97.8 5.3E-06 1.8E-10 55.6 1.6 44 18-62 149-194 (279)
259 3auv_A SC-DSFV derived from th 97.8 2.8E-05 9.7E-10 51.9 5.2 40 17-57 11-50 (276)
260 3pv7_A B7-H6, IG-like domain-c 97.8 2E-05 6.8E-10 51.2 4.3 40 19-58 3-47 (248)
261 1i3g_L Antibody FV fragment; a 97.8 3.1E-05 1E-09 46.0 4.8 38 19-57 5-42 (111)
262 3bp6_B Programmed cell death 1 97.8 1.4E-05 4.7E-10 50.4 3.4 29 31-60 115-143 (202)
263 4dep_C Interleukin-1 receptor 97.8 6.3E-06 2.2E-10 55.8 1.9 45 18-63 224-273 (349)
264 1dn0_B IGM-kappa cold agglutin 97.8 3.7E-05 1.3E-09 50.4 5.5 31 33-63 139-172 (232)
265 1oga_E TRBC1, T-cell receptor 97.8 1.1E-05 3.6E-10 53.4 2.8 45 18-63 122-168 (252)
266 3s96_B 3B5H10 FAB light chain; 97.8 3.5E-05 1.2E-09 48.7 5.2 36 19-56 2-38 (218)
267 4f80_A Butyrophilin subfamily 97.8 5.3E-05 1.8E-09 48.6 6.1 34 24-57 9-45 (226)
268 1igt_B IGG2A intact antibody - 97.8 2.8E-05 9.6E-10 54.7 5.1 45 16-62 344-390 (444)
269 3sob_L Antibody light chain; b 97.8 1.6E-05 5.3E-10 50.9 3.5 45 16-62 133-179 (237)
270 1f2q_A High affinity immunoglo 97.8 7.8E-05 2.7E-09 46.2 6.5 32 31-63 97-129 (176)
271 1moe_A Anti-CEA MAB T84.66; an 97.8 1.9E-05 6.4E-10 51.0 3.7 37 20-57 3-43 (240)
272 3umt_A SCFV heavy chain and li 97.8 4.2E-05 1.4E-09 50.2 5.4 38 18-56 138-175 (256)
273 1i1c_A IGG2A, IG gamma-2A chai 97.8 1.8E-05 6.2E-10 52.8 3.7 42 17-59 14-61 (239)
274 2c1o_A IGK-C protein; FAB frag 97.8 3.8E-05 1.3E-09 50.0 5.1 38 18-56 38-80 (254)
275 1i1r_A GP130, interleukin-6 re 97.8 1.8E-05 6E-10 53.5 3.6 38 23-62 9-53 (303)
276 1nqb_A Single-chain antibody f 97.8 3.8E-05 1.3E-09 51.0 5.2 41 19-60 122-168 (256)
277 1uct_A Immunoglobulin alpha FC 97.8 5.6E-05 1.9E-09 49.5 5.9 42 17-61 105-146 (218)
278 3mj8_L Stimulatory hamster ant 97.8 2.5E-05 8.6E-10 49.4 4.0 31 24-55 6-36 (213)
279 1nfd_E H57 FAB; complex (immun 97.8 1.8E-05 6.1E-10 50.2 3.2 31 26-56 6-36 (212)
280 3nfj_J T cell receptor beta ch 97.7 1.3E-05 4.4E-10 52.2 2.5 45 18-63 123-169 (245)
281 2gki_A Nuclease; anti-DNA anti 97.7 3.8E-05 1.3E-09 52.0 4.9 35 21-56 25-61 (291)
282 2ywz_A NEW antigen receptor va 97.7 5.3E-05 1.8E-09 45.0 5.0 35 21-56 3-39 (111)
283 3bqu_C 3H6 FAB light chain; be 97.7 1.4E-05 4.8E-10 51.3 2.5 43 18-62 134-178 (233)
284 1ry7_B FGFR-3, fibroblast grow 97.7 4.3E-06 1.5E-10 56.2 0.0 37 26-63 15-52 (334)
285 3sgj_C Human FCG3A receptor; r 97.7 7.8E-05 2.7E-09 48.1 6.1 42 18-62 89-131 (204)
286 3d9a_H Heavy chain of hyhel10 97.7 2.5E-05 8.4E-10 49.7 3.6 42 17-60 117-160 (210)
287 1fnl_A Low affinity immunoglob 97.7 0.00011 3.9E-09 45.6 6.5 31 31-62 100-131 (175)
288 1iga_A IGA1; immunoglobulin; N 97.7 3.6E-05 1.2E-09 54.9 4.7 47 16-63 347-395 (475)
289 3o4o_C Interleukin-1 receptor 97.7 2.2E-05 7.5E-10 52.9 3.3 43 16-60 16-65 (339)
290 2wbj_D OB TCR; transmembrane, 97.7 3.2E-05 1.1E-09 51.8 4.1 41 16-57 22-62 (279)
291 1c1e_H Catalytic antibody 1E9 97.7 4.5E-05 1.5E-09 48.6 4.6 37 22-59 4-43 (219)
292 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.7 4.3E-05 1.5E-09 50.4 4.6 36 20-56 5-40 (256)
293 2wqr_A IG epsilon chain C regi 97.7 3.9E-05 1.3E-09 52.0 4.5 45 17-63 218-264 (323)
294 3o4o_C Interleukin-1 receptor 97.7 1.9E-05 6.6E-10 53.2 2.9 44 17-62 225-272 (339)
295 1h5b_A Murine T cell receptor 97.7 5.7E-05 2E-09 44.7 4.7 35 21-57 4-38 (113)
296 4dzb_B Vbeta2 (MAIT T cell rec 97.7 6.3E-05 2.1E-09 48.8 5.2 35 20-55 3-37 (246)
297 1i1c_A IGG2A, IG gamma-2A chai 97.7 5.9E-05 2E-09 50.3 5.2 45 16-62 121-167 (239)
298 3nfj_J T cell receptor beta ch 97.7 5.1E-05 1.8E-09 49.3 4.8 31 25-55 7-37 (245)
299 1nkr_A P58-CL42 KIR; inhibitor 97.7 0.0001 3.4E-09 46.9 6.0 41 17-61 107-147 (201)
300 1qok_A MFE-23 recombinant anti 97.7 4.4E-05 1.5E-09 51.3 4.5 40 19-60 163-203 (282)
301 2j6e_L IGM, FAB light chain; a 97.7 1.2E-05 4.1E-10 51.6 1.7 43 18-62 135-179 (234)
302 1svz_A Immunoglobulin;, single 97.7 4.8E-05 1.6E-09 49.5 4.5 37 20-57 3-44 (247)
303 1q0x_L FAB 9B1, light chain; a 97.7 3.7E-05 1.3E-09 48.7 3.9 32 26-57 7-41 (212)
304 2o26_X MAST/stem cell growth f 97.7 2.9E-05 1E-09 51.3 3.5 37 26-63 98-135 (290)
305 1ugn_A LIR1, leukocyte immunog 97.7 6.7E-05 2.3E-09 47.4 5.0 40 18-61 101-140 (198)
306 2d9c_A Signal-regulatory prote 97.7 6E-05 2E-09 45.9 4.6 37 22-58 11-48 (136)
307 2ny1_B T-cell surface glycopro 97.7 4.1E-05 1.4E-09 47.6 3.9 31 28-58 4-34 (184)
308 3ry4_A Low affinity immunoglob 97.7 0.00012 4.2E-09 44.6 6.0 32 30-62 96-128 (170)
309 1f3r_B FV antibody fragment; I 97.7 2.1E-05 7.3E-10 51.9 2.7 35 21-56 142-176 (257)
310 2x1w_L Vascular endothelial gr 97.7 2.9E-05 1E-09 49.8 3.3 37 26-63 14-54 (213)
311 3oq3_B IFN-alpha/beta binding 97.7 0.00024 8.2E-09 48.2 8.0 35 26-61 235-273 (329)
312 2rcj_C Light chain; immunoglob 97.7 8.3E-05 2.8E-09 53.2 5.8 44 19-63 318-366 (523)
313 3jz7_A MCAR, CAR, coxsackievir 97.6 2.2E-05 7.6E-10 48.9 2.4 27 31-57 133-160 (214)
314 3juy_B 3B3 single chain varian 97.6 0.00011 3.7E-09 48.3 5.8 38 18-56 149-187 (256)
315 2if7_A SLAM family member 6; N 97.6 0.00016 5.5E-09 46.1 6.4 30 33-63 122-153 (193)
316 1moe_A Anti-CEA MAB T84.66; an 97.6 9.7E-05 3.3E-09 47.6 5.4 36 20-56 121-158 (240)
317 3mj6_A Junctional adhesion mol 97.6 3.9E-05 1.3E-09 50.0 3.5 36 24-59 123-161 (268)
318 1igt_B IGG2A intact antibody - 97.6 8.1E-05 2.8E-09 52.4 5.3 45 18-63 238-287 (444)
319 3bkj_L WO2 IGG2A FAB fragment 97.6 3E-05 1E-09 50.9 2.9 44 18-63 150-195 (252)
320 2ec8_A MAST/stem cell growth f 97.6 0.0001 3.5E-09 52.8 5.8 42 17-60 210-252 (524)
321 2ghw_B Anti-SARS SCFV antibody 97.6 5.8E-05 2E-09 48.9 4.1 28 29-56 12-41 (247)
322 3vh8_G Killer cell immunoglobu 97.6 7.2E-05 2.5E-09 50.3 4.7 42 16-61 22-63 (316)
323 3omz_A Human vdelta1 gamma del 97.6 3.7E-05 1.3E-09 50.6 3.2 37 18-55 2-38 (259)
324 2gi7_A GPVI protein; IG-like d 97.6 0.00025 8.5E-09 44.5 6.9 42 17-62 93-134 (184)
325 2oz4_A Intercellular adhesion 97.6 0.00011 3.6E-09 48.3 5.3 31 31-62 15-48 (265)
326 1qgc_4 Protein (immunoglobulin 97.6 5.8E-05 2E-09 52.4 4.1 45 18-64 116-162 (438)
327 2c1o_A IGK-C protein; FAB frag 97.6 3.9E-05 1.3E-09 50.0 3.0 45 18-64 154-200 (254)
328 3ejj_X Macrophage colony-stimu 97.6 6.5E-05 2.2E-09 49.1 4.0 42 21-63 92-134 (289)
329 3oq3_B IFN-alpha/beta binding 97.6 2.6E-05 8.9E-10 53.0 2.1 30 31-61 140-170 (329)
330 1za6_B IGG heavy chain; immuno 97.6 6.5E-05 2.2E-09 51.4 4.1 45 16-62 240-286 (344)
331 1sy6_A T-cell surface glycopro 97.6 7.1E-05 2.4E-09 48.5 4.1 40 19-63 115-154 (204)
332 1qgc_4 Protein (immunoglobulin 97.6 5E-05 1.7E-09 52.7 3.4 43 18-62 343-387 (438)
333 2w59_A IGY FCU3-4; immunoglobu 97.6 9.3E-05 3.2E-09 48.5 4.6 45 17-63 117-163 (231)
334 1k5n_B Beta-2-microglobulin, l 97.6 0.00022 7.5E-09 42.6 5.8 43 17-62 4-48 (100)
335 1qok_A MFE-23 recombinant anti 97.6 0.0001 3.4E-09 49.5 4.7 38 19-57 27-66 (282)
336 1j05_L T84.66 antibody, anti-C 97.6 6.3E-05 2.2E-09 44.4 3.4 35 21-56 4-42 (111)
337 3sbw_C Programmed cell death 1 97.5 0.00011 3.7E-09 46.5 4.5 34 23-56 5-43 (222)
338 1u3h_A T-cell receptor alpha-c 96.7 1.2E-05 4E-10 47.7 0.0 32 26-57 6-37 (110)
339 3eow_R Poliovirus receptor; im 97.5 7E-05 2.4E-09 47.8 3.7 38 17-56 115-154 (221)
340 4dep_C Interleukin-1 receptor 97.5 6.7E-05 2.3E-09 50.7 3.7 40 18-57 6-56 (349)
341 2p1y_A Bispecific alpha/beta T 97.5 0.00011 3.8E-09 47.2 4.6 34 21-56 3-36 (238)
342 1hzh_H IGG, immunoglobulin hea 97.5 8.7E-05 3E-09 52.5 4.3 43 18-62 247-295 (457)
343 1gsm_A Madcam-1, mucosal addre 97.5 0.0002 7E-09 48.3 5.9 41 22-64 93-143 (210)
344 3uzq_A Anti-dengue MAB 4E11; d 97.5 0.00017 5.9E-09 47.2 5.4 38 18-56 133-174 (253)
345 1svz_A Immunoglobulin;, single 97.5 0.00013 4.4E-09 47.4 4.7 38 19-57 128-167 (247)
346 1sq2_N Novel antigen receptor; 97.5 0.00016 5.4E-09 43.2 4.7 35 21-56 3-39 (113)
347 4hwn_A FC receptor-like A; FCR 97.5 0.00024 8.3E-09 42.2 5.5 44 16-62 6-54 (108)
348 1xau_A B- and T-lymphocyte att 97.5 8.9E-05 3E-09 47.5 3.7 34 26-59 21-55 (122)
349 2pet_A Lutheran blood group gl 97.5 5.2E-05 1.8E-09 48.1 2.7 34 25-58 6-40 (231)
350 2znx_A SCFV; fluorotryptohpan, 97.5 0.00011 3.7E-09 48.1 4.3 36 20-56 124-161 (242)
351 1oll_A NK receptor; immune sys 97.5 0.00016 5.5E-09 45.6 4.9 40 18-61 99-138 (188)
352 3gkz_A Anti-methamphetamine si 97.5 0.00019 6.5E-09 47.0 5.3 38 18-56 141-179 (257)
353 3p2t_A Leukocyte immunoglobuli 97.5 0.0002 6.7E-09 45.1 5.2 41 17-61 99-139 (196)
354 1jbj_A CD3 epsilon and gamma e 97.5 4.9E-05 1.7E-09 48.2 2.4 27 33-63 121-147 (186)
355 1eeq_A Kappa-4 immunoglobulin 97.5 0.0001 3.5E-09 43.7 3.7 35 22-57 5-45 (114)
356 2vsd_A CHIR AB1; immune system 97.5 0.00017 5.7E-09 42.7 4.6 41 17-61 4-44 (105)
357 2zg1_A Sialic acid-binding IG- 97.5 0.00011 3.8E-09 46.2 4.0 35 23-57 4-45 (214)
358 1op3_H FAB 2G12, heavy chain; 97.5 0.00018 6.3E-09 46.5 5.1 28 32-60 141-170 (225)
359 3rjd_A High affinity immunoglo 97.5 0.0002 7E-09 46.0 5.3 39 22-62 86-125 (262)
360 4dkd_C Macrophage colony-stimu 97.5 6.8E-05 2.3E-09 49.1 3.0 41 21-63 92-134 (292)
361 1pko_A Myelin oligodendrocyte 97.5 0.00035 1.2E-08 42.3 6.0 38 21-58 8-48 (139)
362 1c5d_H Monoclonal antibody aga 97.5 0.00011 3.6E-09 47.3 3.9 29 32-61 135-165 (215)
363 2gjj_A A21 single-chain antibo 97.5 0.00013 4.6E-09 48.7 4.5 38 18-56 5-48 (264)
364 1vca_A VCAM-D1,2, human vascul 97.5 5.8E-05 2E-09 48.7 2.5 31 31-62 103-136 (202)
365 1igy_B IGG1 intact antibody MA 97.5 8.5E-05 2.9E-09 52.2 3.5 44 17-62 335-380 (434)
366 2zg1_A Sialic acid-binding IG- 97.5 0.00016 5.6E-09 45.5 4.5 27 31-57 135-165 (214)
367 3auv_A SC-DSFV derived from th 97.4 9.7E-05 3.3E-09 49.3 3.6 37 20-57 136-174 (276)
368 2d9q_B Granulocyte colony-stim 97.4 5.7E-05 2E-09 51.3 2.4 32 29-61 10-46 (313)
369 1ccz_A Protein (CD58); LFA-3, 97.4 0.00015 5.1E-09 45.9 4.2 28 37-65 108-135 (171)
370 1hnf_A CD2; T lymphocyte adhes 97.4 0.0003 1E-08 45.5 5.7 26 35-61 116-141 (182)
371 1sy6_A T-cell surface glycopro 97.4 0.00011 3.7E-09 47.6 3.5 27 32-62 16-42 (204)
372 3bae_H WO2 IGG2A FAB fragment 97.4 0.00014 4.6E-09 47.2 4.0 42 17-60 129-172 (228)
373 2ptt_A CD48 antigen; CD244, CD 97.4 0.00017 5.7E-09 42.2 4.0 35 25-59 9-44 (110)
374 1x9q_A SCFV, 4M5.3 anti-fluore 97.4 0.00017 5.8E-09 47.8 4.5 40 17-57 14-58 (268)
375 4fa8_A Secreted protein BARF1; 97.4 6.6E-05 2.3E-09 49.2 2.4 30 28-58 2-34 (203)
376 2fbj_H IGA-kappa J539 FAB (hea 97.4 8.7E-05 3E-09 48.0 3.0 42 17-61 122-166 (220)
377 1lk2_B Beta-2-microglobulin; c 97.4 0.00035 1.2E-08 41.6 5.4 43 17-62 3-47 (99)
378 3juy_B 3B3 single chain varian 97.4 0.00031 1.1E-08 46.0 5.7 38 18-56 6-45 (256)
379 4acp_A IG gamma-1 chain C regi 97.4 0.00016 5.4E-09 48.7 4.3 45 17-62 21-70 (240)
380 2z35_A T-cell receptor alpha-c 97.4 0.00074 2.5E-08 39.8 6.8 33 25-57 6-38 (112)
381 3pv7_A B7-H6, IG-like domain-c 97.4 0.00017 5.8E-09 46.7 4.3 39 18-59 119-159 (248)
382 1mju_H Immunoglobulin MS6-12; 97.4 0.00012 4.1E-09 47.7 3.5 29 32-61 134-164 (227)
383 2ocw_A Polymeric-immunoglobuli 97.4 0.0002 6.9E-09 51.7 5.0 35 27-62 450-488 (585)
384 1xt5_A Variable region-contain 97.4 0.00022 7.5E-09 42.6 4.4 37 22-58 7-46 (135)
385 3m8o_H Immunoglobulin A1 heavy 97.4 0.00013 4.4E-09 46.8 3.6 29 32-61 136-167 (221)
386 3gkz_A Anti-methamphetamine si 97.4 0.00014 4.9E-09 47.6 3.9 39 17-56 7-47 (257)
387 2coq_A NEW antigen receptor va 97.4 0.00018 6.2E-09 42.3 4.0 35 21-56 3-39 (108)
388 1wio_A CD4, T-cell surface gly 97.4 0.00011 3.7E-09 50.3 3.4 31 28-58 3-33 (363)
389 3o3u_N Maltose-binding peripla 97.4 0.00062 2.1E-08 49.4 7.5 28 37-65 490-518 (581)
390 1jbj_A CD3 epsilon and gamma e 97.4 0.0001 3.5E-09 46.7 3.0 35 26-64 7-41 (186)
391 2r15_A Myomesin-1; sarcomeric 97.4 0.00026 8.8E-09 44.3 4.6 35 33-68 16-51 (212)
392 3esu_F Antibody 14B7* light ch 97.4 0.00019 6.4E-09 46.6 4.1 38 18-56 131-170 (250)
393 1fo0_B Protein (BM3.3 T cell r 97.4 0.00084 2.9E-08 39.8 6.7 35 21-56 4-38 (112)
394 4acp_A IG gamma-1 chain C regi 97.4 0.0003 1E-08 47.4 5.2 45 16-62 128-174 (240)
395 3uzq_A Anti-dengue MAB 4E11; d 97.4 0.00021 7.3E-09 46.7 4.3 34 21-55 4-39 (253)
396 1zvo_C Myeloma immunoglobulin 97.4 0.00026 8.8E-09 51.7 5.1 45 17-62 295-341 (512)
397 4ffy_L DENV1-E111 single chain 97.3 0.00018 6.3E-09 43.6 3.7 36 20-56 3-42 (126)
398 1hxm_B Gamma-delta T-cell rece 97.3 0.00011 3.9E-09 48.1 2.9 30 32-61 145-176 (242)
399 1dlf_L Anti-dansyl immunoglobu 97.3 0.00031 1E-08 41.5 4.5 35 22-57 5-44 (113)
400 1ypz_F T-cell receptor gamma c 97.3 5.2E-05 1.8E-09 49.6 1.2 29 34-62 145-175 (230)
401 1bii_B Beta-2 microglobulin, M 97.3 0.00047 1.6E-08 42.7 5.5 45 15-62 21-67 (119)
402 2yc1_B Single chain antibody f 97.3 0.00031 1.1E-08 44.6 4.7 39 18-57 16-54 (146)
403 1nez_G T-cell surface glycopro 97.3 0.00051 1.8E-08 42.3 5.6 39 17-56 3-41 (128)
404 2gki_A Nuclease; anti-DNA anti 97.3 0.0002 6.7E-09 48.5 3.9 37 20-57 161-203 (291)
405 1p6f_A NKP46, natural cytotoxi 97.3 0.00067 2.3E-08 45.3 6.5 43 15-61 4-46 (242)
406 1fo0_A Protein (BM3.3 T cell r 97.3 0.0011 3.7E-08 39.4 6.7 32 25-56 6-38 (116)
407 1mju_H Immunoglobulin MS6-12; 97.3 0.00036 1.2E-08 45.4 4.9 35 22-57 4-40 (227)
408 1nqb_A Single-chain antibody f 97.3 0.00021 7.3E-09 47.4 3.8 34 22-56 4-39 (256)
409 2dru_A Chimera of CD48 antigen 97.3 0.00024 8.1E-09 45.3 3.9 27 34-62 115-142 (180)
410 1za6_B IGG heavy chain; immuno 97.3 0.00025 8.6E-09 48.4 4.2 35 22-57 4-40 (344)
411 3omz_A Human vdelta1 gamma del 97.3 0.00031 1.1E-08 46.1 4.5 38 18-56 136-174 (259)
412 1n26_A IL-6 receptor alpha cha 97.3 0.00018 6.2E-09 49.3 3.5 36 24-59 11-47 (325)
413 2aty_A Complement receptor chi 97.3 0.00032 1.1E-08 49.4 4.8 45 16-62 272-318 (376)
414 3ux9_B SCFV antibody; five hel 97.3 0.00034 1.2E-08 45.6 4.6 34 22-56 138-173 (256)
415 4ei6_B Vbeta16 XV19 type II na 97.3 0.0004 1.4E-08 44.9 4.8 35 19-55 3-37 (245)
416 4fom_A Poliovirus receptor-rel 97.3 0.00023 7.7E-09 47.3 3.7 35 26-61 121-156 (308)
417 1itb_B Type 1 interleukin-1 re 97.3 0.00017 5.8E-09 47.9 3.1 32 30-62 114-151 (315)
418 1f3r_B FV antibody fragment; I 97.3 0.00013 4.3E-09 48.2 2.4 33 23-56 5-39 (257)
419 3gbl_A BETA2-microglobulin; im 97.3 0.00086 2.9E-08 39.8 5.9 29 33-62 17-47 (97)
420 1wio_A CD4, T-cell surface gly 97.3 0.00021 7.1E-09 48.9 3.5 29 31-59 108-136 (363)
421 1hxm_B Gamma-delta T-cell rece 97.3 0.00047 1.6E-08 45.1 5.1 37 20-57 3-41 (242)
422 3jz7_A MCAR, CAR, coxsackievir 97.3 0.00016 5.5E-09 44.9 2.7 33 24-56 5-41 (214)
423 3ux9_B SCFV antibody; five hel 97.3 0.00021 7.1E-09 46.6 3.3 33 23-56 7-41 (256)
424 3d9a_H Heavy chain of hyhel10 97.2 0.00017 5.7E-09 45.8 2.7 33 23-56 5-39 (210)
425 3khq_A B-cell antigen receptor 97.2 0.00038 1.3E-08 43.0 4.3 35 19-56 18-52 (133)
426 3mj6_A Junctional adhesion mol 97.2 0.00014 4.8E-09 47.3 2.4 39 19-58 6-47 (268)
427 1pz5_B Heavy chain of FAB (SYA 97.2 0.00031 1.1E-08 44.8 4.0 35 22-57 4-40 (220)
428 2j6e_L IGM, FAB light chain; a 97.2 0.0001 3.4E-09 47.2 1.5 39 17-57 19-59 (234)
429 3noi_A Natural cytotoxicity tr 97.2 0.0006 2E-08 40.7 4.8 43 18-61 7-56 (120)
430 1eaj_A Coxsackie virus and ade 97.2 0.00019 6.6E-09 41.4 2.5 36 22-57 8-47 (126)
431 3moq_A NEW antigen receptor va 97.2 0.00058 2E-08 42.3 4.9 35 21-56 3-39 (126)
432 3q5y_A TCR N15 beta; IG, T cel 97.2 0.00034 1.1E-08 45.2 3.9 34 20-55 4-37 (240)
433 2ocw_A Polymeric-immunoglobuli 97.2 0.00039 1.3E-08 50.1 4.6 41 18-59 331-376 (585)
434 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.2 0.00056 1.9E-08 45.0 5.0 37 17-55 136-172 (256)
435 3udw_C Poliovirus receptor; PV 97.2 0.00054 1.8E-08 39.4 4.3 34 22-56 4-42 (118)
436 1tvd_A T cell receptor, ES204 97.2 0.0016 5.4E-08 38.4 6.5 34 22-56 4-38 (116)
437 2if7_A SLAM family member 6; N 97.2 0.0004 1.4E-08 44.2 4.0 36 25-61 4-40 (193)
438 3c5j_A HLA class II histocompa 97.2 0.00099 3.4E-08 43.5 5.9 43 17-62 85-129 (181)
439 1op3_H FAB 2G12, heavy chain; 97.2 0.00033 1.1E-08 45.3 3.6 34 23-57 5-40 (225)
440 3u83_A Poliovirus receptor-rel 97.2 0.001 3.5E-08 44.3 6.0 31 26-56 139-173 (331)
441 1b6u_A KIR2DL3, P58 killer cel 97.2 0.00072 2.5E-08 45.8 5.3 41 17-61 106-146 (257)
442 3r4d_A CEA-related cell adhesi 97.1 0.00037 1.3E-08 43.5 3.6 28 30-57 10-37 (208)
443 2otu_A FV light chain variable 97.1 0.0025 8.5E-08 37.7 7.1 31 26-56 8-39 (115)
444 1q9r_B S25-2 FAB (IGG1K) heavy 97.1 0.00033 1.1E-08 44.7 3.3 34 23-57 5-40 (222)
445 2qhl_A Novel immune-type recep 97.1 0.00035 1.2E-08 41.2 3.2 31 26-56 6-37 (111)
446 3qib_D 2B4 beta chain; IG doma 97.1 0.00058 2E-08 45.0 4.6 36 18-55 27-62 (270)
447 3c5j_B MHC class II antigen; H 97.1 0.00062 2.1E-08 44.2 4.6 44 16-62 94-139 (190)
448 3to4_D NKT vbeta2 (mouse varia 97.1 0.00032 1.1E-08 46.1 3.3 31 25-55 7-37 (253)
449 1pew_A JTO2, A lambda-6 type i 97.1 0.00047 1.6E-08 40.5 3.7 32 26-57 7-40 (109)
450 2fbj_H IGA-kappa J539 FAB (hea 97.1 0.00054 1.9E-08 44.2 4.3 33 23-56 5-39 (220)
451 3nl4_H Antigen binding fragmen 97.1 0.00022 7.5E-09 45.5 2.4 41 17-59 119-161 (215)
452 1igy_B IGG1 intact antibody MA 97.1 0.00064 2.2E-08 47.7 4.9 28 32-60 132-161 (434)
453 3umt_A SCFV heavy chain and li 97.1 0.00055 1.9E-08 44.8 4.2 34 22-56 6-41 (256)
454 2xqy_G A13-D6.3 monoclonal ant 97.1 0.00037 1.3E-08 46.9 3.3 42 18-61 129-172 (261)
455 3p73_B Beta-2-microglobulin; I 97.1 0.0016 5.3E-08 38.8 5.7 29 33-62 17-47 (99)
456 4dkd_C Macrophage colony-stimu 97.1 0.00061 2.1E-08 44.5 4.2 42 18-61 186-228 (292)
457 1uvq_B HLA class II histocompa 97.1 0.00086 2.9E-08 43.9 4.9 43 17-62 93-137 (198)
458 2gjj_A A21 single-chain antibo 97.1 0.00057 2E-08 45.5 4.1 34 23-57 143-178 (264)
459 1b6u_A KIR2DL3, P58 killer cel 97.1 0.0005 1.7E-08 46.6 3.8 41 16-60 5-45 (257)
460 1ow0_A IG alpha-1 chain C regi 97.1 4.2E-05 1.5E-09 49.4 -1.5 33 20-53 6-41 (214)
461 2atp_B T-cell surface glycopro 97.1 0.00069 2.4E-08 40.0 4.0 32 26-57 5-37 (115)
462 2xqy_G A13-D6.3 monoclonal ant 97.1 0.00065 2.2E-08 45.7 4.3 37 20-57 8-46 (261)
463 4fqp_A Poliovirus receptor; im 97.1 0.00055 1.9E-08 45.7 4.0 35 21-56 3-42 (313)
464 1ypz_F T-cell receptor gamma c 97.0 0.0026 9E-08 41.4 7.0 32 25-56 7-40 (230)
465 3bj9_1 Immunoglobulin IOTA cha 97.0 0.0023 7.7E-08 37.7 6.0 33 23-56 3-38 (116)
466 3u6r_L Antibody 1:7 (light cha 97.0 0.0026 8.8E-08 40.1 6.6 35 21-56 3-37 (143)
467 3vh8_G Killer cell immunoglobu 97.0 0.0014 5E-08 43.8 5.7 41 17-61 218-258 (316)
468 2i24_N NEW antigen receptor PB 97.0 0.00074 2.5E-08 41.2 3.9 36 21-57 3-40 (121)
469 3pl6_D MBP peptide / T-cell re 97.0 0.00036 1.2E-08 45.9 2.7 37 17-55 25-61 (268)
470 2aty_A Complement receptor chi 97.0 0.00063 2.2E-08 47.9 4.0 39 20-59 169-212 (376)
471 1uvq_A HLA class II histocompa 97.0 0.0017 5.8E-08 43.1 5.9 43 17-62 88-132 (197)
472 3tv3_L PGT128 light chain, IG 97.0 0.00064 2.2E-08 42.8 3.5 30 24-56 6-35 (211)
473 3liz_H 4C3 monoclonal antibody 97.0 0.00078 2.7E-08 44.4 4.0 41 17-59 123-165 (253)
474 3t0v_A Immunoglobulin variable 96.9 0.0033 1.1E-07 38.4 6.5 36 19-56 2-39 (123)
475 1oaq_L Light chain; antibody, 96.9 0.00069 2.3E-08 40.5 3.3 32 24-56 6-40 (120)
476 3o81_A Beta-2-microglobulin; I 96.9 0.0023 7.8E-08 39.6 5.7 45 15-62 21-67 (119)
477 1c5d_H Monoclonal antibody aga 96.9 0.00081 2.8E-08 43.1 3.8 33 24-57 6-40 (215)
478 1ncn_A T lymphocyte activation 96.9 0.0011 3.9E-08 38.4 4.1 30 29-58 4-38 (110)
479 1nko_A Sialic acid binding IG- 96.9 0.00097 3.3E-08 40.1 3.9 37 20-57 8-51 (132)
480 1dee_B IGM RF 2A2; FAB-IBP com 96.9 0.00089 3.1E-08 43.2 3.9 35 22-57 4-40 (223)
481 1a2y_B IGG1-kappa D1.3 FV (hea 96.9 0.0043 1.5E-07 36.6 6.6 33 23-56 5-39 (116)
482 2aw2_A B and T lymphocyte atte 96.9 0.002 6.9E-08 41.0 5.3 32 27-58 19-51 (120)
483 1bec_A 14.3.D T cell antigen r 96.9 0.0014 4.8E-08 42.6 4.7 34 22-57 3-36 (238)
484 2dru_A Chimera of CD48 antigen 96.9 0.00063 2.2E-08 43.3 3.0 33 26-58 6-39 (180)
485 1x9q_A SCFV, 4M5.3 anti-fluore 96.9 0.0015 5.1E-08 43.2 4.8 35 21-56 154-190 (268)
486 3bae_H WO2 IGG2A FAB fragment 96.9 0.00065 2.2E-08 43.9 2.9 34 23-57 5-42 (228)
487 3bp6_A Programmed cell death p 96.9 0.0062 2.1E-07 36.2 7.1 34 22-56 3-37 (117)
488 1ypz_E T cell receptor delta, 96.9 0.0019 6.5E-08 41.7 5.1 33 22-56 5-37 (207)
489 1ccz_A Protein (CD58); LFA-3, 96.9 0.00051 1.7E-08 43.4 2.3 30 28-58 4-33 (171)
490 1iak_A MHC class II I-AK; hist 96.8 0.0024 8.3E-08 42.4 5.7 43 17-62 89-133 (199)
491 3jts_B Beta-2-microglobulin; a 96.8 0.0024 8.1E-08 39.5 5.2 44 15-61 21-66 (119)
492 2eys_A NKT15; natural killer T 96.8 0.0048 1.7E-07 40.7 6.8 35 21-56 6-40 (210)
493 1n4x_H Immunoglobulin heavy ch 96.8 0.0071 2.4E-07 35.8 7.0 34 22-56 4-39 (120)
494 2or8_A Hepatitis A virus cellu 96.8 0.0011 3.7E-08 38.6 3.2 33 25-57 3-36 (116)
495 3v2a_R Vascular endothelial gr 96.8 0.0023 8E-08 47.3 5.7 43 18-61 223-267 (772)
496 1kxv_C Camelid VHH domain CAB1 96.8 0.0063 2.1E-07 36.3 6.7 34 22-56 4-39 (121)
497 1dr9_A B7-1 (CD80), T lymphocy 96.8 0.00053 1.8E-08 42.9 1.9 32 29-61 4-39 (201)
498 1iga_A IGA1; immunoglobulin; N 96.8 0.0015 5E-08 46.6 4.4 36 18-53 246-284 (475)
499 1u9k_A Triggering receptor exp 96.8 0.0028 9.4E-08 37.5 4.9 33 24-56 4-38 (114)
500 3r8b_B G5-8, enterotoxin type 96.8 0.0069 2.4E-07 36.6 6.9 35 21-56 8-42 (125)
No 1
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.26 E-value=1.9e-11 Score=74.07 Aligned_cols=50 Identities=22% Similarity=0.584 Sum_probs=41.2
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
....+|.|+..| +++.+..|+.+.|.|.|.|+|.|+|+|++ ||..|....
T Consensus 9 ~~~~pP~f~~~p-~~~~v~~G~~~~l~C~~~G~P~p~v~W~k-~g~~l~~~~ 58 (107)
T 3knb_B 9 DQGSPPCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASE 58 (107)
T ss_dssp -CCEEEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred CCCCCCEEEeCC-CcEEEeCCCcEEEEEEEEEecCCEEEEEE-Cccccccee
Confidence 345689999986 55667889999999999999999999996 888876544
No 2
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.14 E-value=4.2e-11 Score=71.46 Aligned_cols=48 Identities=23% Similarity=0.477 Sum_probs=40.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
.+|.|+.. ++++.+..|+.+.|.|.|.|+|.|+|+|++ ||.+|....+
T Consensus 4 ~PP~i~~~-p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k-~g~~i~~~~~ 51 (100)
T 3knb_A 4 IPPKIEAL-PSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQ 51 (100)
T ss_dssp EEEEECCC-CSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGG
T ss_pred CCCEEEeC-CCcEEEeCCCeEEEEEEEEEecCCEEEEEE-CceEeeeecc
Confidence 57888876 566778889999999999999999999997 8888865543
No 3
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.12 E-value=1.1e-10 Score=80.14 Aligned_cols=52 Identities=79% Similarity=1.404 Sum_probs=45.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCce
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGLR 68 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~r 68 (74)
.+|.|+.+|++.+.+.+|+.+.|.|.|.|+|.|+|+|++.||.++...++.+
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~ 53 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLR 53 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTB
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCce
Confidence 5899999999888888998999999999999999999988898887655444
No 4
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.09 E-value=5.9e-10 Score=64.28 Aligned_cols=49 Identities=16% Similarity=0.368 Sum_probs=40.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|+..|.+ +.+..|+.+.|.|.|.|.|.|+|+|++ ||..+.....
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~ 51 (99)
T 1g1c_A 3 MEAPKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYK-NGVKIERSDR 51 (99)
T ss_dssp CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSS
T ss_pred CCCCceEecCcc-eEEcCCCcEEEEEEEEEeCCCEEEEEE-CCEECCCCCC
Confidence 468999998654 557788899999999999999999996 7887765443
No 5
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.07 E-value=1.8e-10 Score=86.73 Aligned_cols=56 Identities=75% Similarity=1.338 Sum_probs=47.4
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCceE
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGLRK 69 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~r~ 69 (74)
....+|.|+.+|++.+.+.+|++++|+|.|.|+|.|+|+|+++||..+...++.++
T Consensus 34 ~~~~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~ 89 (816)
T 3dmk_A 34 ADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQ 89 (816)
T ss_dssp --CEEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBE
T ss_pred cccCCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEE
Confidence 34567999999998888999999999999999999999999889998876655443
No 6
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.03 E-value=1.4e-09 Score=63.26 Aligned_cols=49 Identities=10% Similarity=0.233 Sum_probs=40.3
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|+..| ..+.+..|+.+.|.|.+.|+|.|+|+|++ ||..+.....
T Consensus 6 ~~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~ 54 (103)
T 3qp3_A 6 DHAPRITLRM-RSHRVPCGQNTRFILNVQSKPTAEVKWYH-NGVELQESSK 54 (103)
T ss_dssp CEEEEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCCSS
T ss_pred CCCCEEEeCC-cceEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCC
Confidence 4688999886 55567788899999999999999999996 7887765543
No 7
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.02 E-value=6.4e-10 Score=64.26 Aligned_cols=48 Identities=21% Similarity=0.457 Sum_probs=39.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
..+|.|+..| ..+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+....
T Consensus 3 ~~~P~~~~~p-~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~ 50 (100)
T 2kdg_A 3 MGPPRFIQVP-ENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSDD 50 (100)
T ss_dssp CEEEECCCCC-CCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCCS
T ss_pred CCCCeEEeCC-CCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCCC
Confidence 4578888875 55567788899999999999999999997 788776554
No 8
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.01 E-value=3.6e-10 Score=65.50 Aligned_cols=47 Identities=17% Similarity=0.482 Sum_probs=39.4
Q ss_pred CccceEEEcC---CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEP---PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~P---p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
..+|.|+..| ++.+.+..|+.+.|.|.|.|.|.|+|+|++ ||..+..
T Consensus 2 ~~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~~~~ 51 (100)
T 3caf_A 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQ 51 (100)
T ss_dssp CEEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEE-TTEECCG
T ss_pred CCCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEE-CCEEccc
Confidence 4689999876 456777889999999999999999999996 7777654
No 9
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.00 E-value=2e-09 Score=62.03 Aligned_cols=47 Identities=17% Similarity=0.343 Sum_probs=38.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
..+|.|+..|.. +.+..|+.+.|.|.|.|+|.|+|+|++ ||..+...
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~~~ 49 (99)
T 1u2h_A 3 KAPPTFKVSLMD-QSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVRPD 49 (99)
T ss_dssp CEEEEEEECCCC-EEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCB
T ss_pred CCCCEEEEcCCc-eEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCC
Confidence 467899988654 467788899999999999999999997 77776543
No 10
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.98 E-value=2.9e-09 Score=61.17 Aligned_cols=49 Identities=24% Similarity=0.459 Sum_probs=40.0
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.|+..| ..+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+....
T Consensus 3 ~~~~P~i~~~~-~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~ 51 (99)
T 3puc_A 3 ISSKPVIVTGL-QDTTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQGG 51 (99)
T ss_dssp CCEEEEEEECC-CCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCSSS
T ss_pred CCCCCEEEecC-ccEEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcCCC
Confidence 45688999886 45567788899999999999999999997 787775543
No 11
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.97 E-value=1.3e-09 Score=64.82 Aligned_cols=49 Identities=12% Similarity=0.256 Sum_probs=39.4
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.|+.. ++.+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+....
T Consensus 4 ~~~pp~i~~~-~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~ 52 (114)
T 2cqv_A 4 GSSGPQIIQF-PEDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQESE 52 (114)
T ss_dssp CCCCCEESCC-CCSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCCSS
T ss_pred CCCCCEEEeC-CCCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcCCC
Confidence 4468888876 456677889899999999999999999997 676665433
No 12
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.97 E-value=9.8e-10 Score=65.52 Aligned_cols=48 Identities=27% Similarity=0.622 Sum_probs=39.5
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+..+|.|+..|. .+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 5 ~~~~pP~i~~~p~-~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~~ 52 (117)
T 2v9t_A 5 QEDFPPRIVEHPS-DLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVET 52 (117)
T ss_dssp CCCEEEEEEECCC-CEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred cccCCCeeEcCCC-CEEEcCCCcEEEEEECCccCCCeEEEEE-CCEeccc
Confidence 3457899999864 5567888899999999999999999997 6777653
No 13
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.96 E-value=1e-09 Score=76.66 Aligned_cols=50 Identities=30% Similarity=0.607 Sum_probs=39.1
Q ss_pred CccceEEEcCCCcEEe--cCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDF--SNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~--~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|+|+++|++.+.. .+|+.+.|.|.|.|+|.|+|+|++ ||.++....+
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k-~g~~l~~~~~ 54 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKL-NGTDVDIGMD 54 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEE-TTEECCC---
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEE-CCEECcCCCC
Confidence 4689999997766532 467779999999999999999996 8988865443
No 14
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.95 E-value=1.4e-09 Score=62.67 Aligned_cols=44 Identities=18% Similarity=0.404 Sum_probs=36.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCC--eeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG--TAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG--~~i~~ 63 (74)
+|.|... +..+.+..|+.+.|.|.|.|+|.|+|+|++ || .++..
T Consensus 2 ~P~i~~~-~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~~~~~~~~~ 47 (93)
T 1wit_A 2 KPKILTA-SRKIKIKAGFTHNLEVDFIGAPDPTATWTV-GDSGAALAP 47 (93)
T ss_dssp CCEECCC-CCEEEECTTBCCEEEEEEECCSSCEEEEEC-STTTCBCST
T ss_pred CCeEEcC-CCceEEeCCCEEEEEEEEEEcCCCEEEEEE-CCCCcccCC
Confidence 6888655 567778899999999999999999999997 55 66543
No 15
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=2.3e-09 Score=62.98 Aligned_cols=50 Identities=22% Similarity=0.578 Sum_probs=40.3
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
....+|.|+..| ..+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+....
T Consensus 5 ~~~~~P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~ 54 (110)
T 2dm3_A 5 SSGFRPHFLQAP-GDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVRPDS 54 (110)
T ss_dssp CCCCCCEEEECC-CEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCCCCS
T ss_pred CCCCCCcEEeCC-CcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCC
Confidence 345689999985 55667888899999999999999999996 777665443
No 16
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.91 E-value=4.9e-09 Score=60.74 Aligned_cols=46 Identities=26% Similarity=0.582 Sum_probs=37.9
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
...+|.|+..|. .+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+.
T Consensus 5 ~~~~P~i~~~p~-~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 50 (100)
T 2edj_A 5 SSGPPIILQGPA-NQTLAVDGTALLKCKATGDPLPVISWLK-EGFTFP 50 (100)
T ss_dssp CCSSCEEEECCC-CEEEESSSEEEECCEEECSSCCEEEEEE-SSSEES
T ss_pred CCCCCEEEeCcC-CEEEcCCCcEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 457889998864 4557788889999999999999999997 676665
No 17
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.90 E-value=5.6e-09 Score=60.85 Aligned_cols=49 Identities=22% Similarity=0.599 Sum_probs=39.7
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
....+|.|+..| ..+.+..|+.+.|.|.+.|+|.|+|+|++ ||..+...
T Consensus 9 ~~~~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~ 57 (107)
T 3irg_B 9 DQGSPPCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAAS 57 (107)
T ss_dssp -CCEEEEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCC
T ss_pred CCCCCCeeEcCC-ccEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCCC
Confidence 345689999886 45567788899999999999999999997 78776543
No 18
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=3.3e-09 Score=62.54 Aligned_cols=48 Identities=21% Similarity=0.531 Sum_probs=39.1
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
....+|.|+..| ..+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 4 ~~~~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~ 51 (110)
T 2dm2_A 4 GSSGAPFFEMKL-KHYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQISP 51 (110)
T ss_dssp CCSCCCCBSSCC-CCEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCCT
T ss_pred CCCCCCEEEecC-cCeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCC
Confidence 345688888875 55567788899999999999999999996 7777654
No 19
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.90 E-value=2.6e-09 Score=61.85 Aligned_cols=48 Identities=21% Similarity=0.471 Sum_probs=39.2
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
....+|.|+..|. .+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 7 ~~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~ 54 (99)
T 2yr3_A 7 GMEVAPSFSSVLK-DCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQY 54 (99)
T ss_dssp CCCEEEEEEECCC-CEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCSS
T ss_pred CcccCCceeecCC-CCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECcc
Confidence 3457889998864 5567889899999999999999999997 6766643
No 20
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.86 E-value=4.2e-09 Score=60.28 Aligned_cols=45 Identities=24% Similarity=0.530 Sum_probs=37.4
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.|+.. +..+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+..
T Consensus 4 ~pP~i~~~-~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~ 48 (100)
T 3irg_A 4 IPPKIEAL-PSDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHS 48 (100)
T ss_dssp EEEEECCC-CSEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCT
T ss_pred CCCeeecC-CCcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEeec
Confidence 56788776 466677888899999999999999999997 7877753
No 21
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.86 E-value=1.9e-08 Score=57.69 Aligned_cols=46 Identities=20% Similarity=0.354 Sum_probs=36.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.++.|...|. ...+..|+.+.|.|.|.|+|.|+|+|++ ||.++...
T Consensus 2 ~~~~i~~~p~-~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~ 47 (91)
T 3bfo_A 2 SKLQICVEPT-SQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHE 47 (91)
T ss_dssp CCCEEEECCC-CEEECTTSCEEEECEEECSSCCEEEEEE-TTEECTTC
T ss_pred CceEEEECCC-ccEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCcC
Confidence 3567777754 4457788899999999999999999997 78776543
No 22
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.85 E-value=3.4e-09 Score=62.76 Aligned_cols=48 Identities=17% Similarity=0.388 Sum_probs=37.4
Q ss_pred cceEEEcCCCcEE--ecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCc
Q psy11558 18 GPIFIKEPPNRID--FSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGL 67 (74)
Q Consensus 18 ~P~fv~~Pp~~v~--~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~ 67 (74)
-|.++.+|++++. ...|+.+.|.|.+.| |.|+|+|++ ||.+|......
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k-~g~~i~~~~~~ 52 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYK-DGQEVEESDFV 52 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEE-TTSCCCCCSSC
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEE-CCEEeeeeeee
Confidence 4666777777644 357888999999987 999999997 88888765543
No 23
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.84 E-value=5.3e-09 Score=64.08 Aligned_cols=46 Identities=26% Similarity=0.426 Sum_probs=34.8
Q ss_pred cCCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCee
Q psy11558 13 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTA 60 (74)
Q Consensus 13 ~~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~ 60 (74)
.....+|.|++.|. .+.+..|+.+.|.|.|.|+|.|+|+|++ +|..
T Consensus 16 ~~~~~pP~~~~~p~-~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~~~~ 61 (137)
T 3qr2_A 16 PRGSHMAGFVQAPL-SQQRWVGGSVELHCEAVGSPVPEIQWWF-EGQG 61 (137)
T ss_dssp -----CCEEEECCC-CEEEETTSCEEEEEEEECSSCCEEEEEE-EESS
T ss_pred CCCCCCCeEEcCCC-CEEEeCCCCEEEEEEEeeecCCeEEEEE-CCCC
Confidence 34477999999864 5567788899999999999999999998 4443
No 24
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.84 E-value=5.8e-09 Score=62.99 Aligned_cols=47 Identities=23% Similarity=0.539 Sum_probs=38.9
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
...+|.|++.|.+ +.+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 12 ~~~~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~~ 58 (116)
T 2kkq_A 12 HKRAPMFIYKPQS-KKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQF 58 (116)
T ss_dssp CCBCCCBSSCCCC-EEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECCC
T ss_pred CCCCCeEEeCCCc-EEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECcC
Confidence 3568899998655 567788899999999999999999997 6776653
No 25
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.82 E-value=2e-08 Score=57.95 Aligned_cols=44 Identities=5% Similarity=0.077 Sum_probs=36.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCCeeecCCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG~~i~~~~ 65 (74)
++..|+..+.+..|+.+.|.|.+.|. |.|+|+|++ ||..+....
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~-~~~~~~~~~ 47 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYF-GVRQLENSE 47 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEE-TTEECCSSS
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEE-CCEECcCCC
Confidence 35567778888899999999999997 999999997 777765443
No 26
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=7.6e-09 Score=61.94 Aligned_cols=47 Identities=13% Similarity=0.241 Sum_probs=38.4
Q ss_pred CCccceEEEc--CCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKE--PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~--Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
...+|.|... +++.+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+.
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~g~~l~ 66 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTK-GGAPLD 66 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECC
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEE-CCEECC
Confidence 3457888643 4567778889999999999999999999996 787775
No 27
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.81 E-value=1.8e-08 Score=63.19 Aligned_cols=49 Identities=24% Similarity=0.655 Sum_probs=40.0
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.|+..|.. +.+..|..+.|.|.|.|+|.|+|+|++ ||..+....
T Consensus 38 v~~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~~~ 86 (154)
T 1fhg_A 38 PHVKPYFTKTILD-MEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKESR 86 (154)
T ss_dssp CCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCSS
T ss_pred CCCCCeEEccCCc-EEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCCCC
Confidence 3468899988654 567888899999999999999999997 787775543
No 28
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=5.2e-09 Score=62.70 Aligned_cols=44 Identities=16% Similarity=0.309 Sum_probs=36.2
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
+.|+.. ++++.+.+|+.+.|.|.+.|.|.|+|+|++ ||..+...
T Consensus 14 ~~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~~ 57 (115)
T 2cr6_A 14 VHIIED-LEDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHAN 57 (115)
T ss_dssp CEEEEC-CCEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECCS
T ss_pred CeEecc-CccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCCC
Confidence 467666 466678889999999999999999999997 77777543
No 29
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.81 E-value=2.2e-08 Score=58.33 Aligned_cols=48 Identities=15% Similarity=0.284 Sum_probs=39.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
..+|.|+..|++.+.+..|+.+.|.|.+. .|.|+|+|++ ||..+....
T Consensus 5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k-~g~~i~~~~ 52 (100)
T 2yuv_A 5 SSGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYK-NGQEIRPST 52 (100)
T ss_dssp SSSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEE-SSCBCCCBT
T ss_pred CCCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEE-CCEECCCCC
Confidence 46899999987766778888999999999 7999999997 777765443
No 30
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.81 E-value=2e-08 Score=59.21 Aligned_cols=48 Identities=15% Similarity=0.102 Sum_probs=38.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|+..| +++.+.+|+.+.|.|.+.| |.|+|+|++ ||.+|.....
T Consensus 3 ~~~~~~~~~~-~~~~v~~G~~v~l~C~v~~-~~~~v~W~k-~g~~i~~~~~ 50 (93)
T 1waa_A 3 MALIEVEKPL-YGVEVFVGETAHFEIELSE-PDVHGQWKL-KGQPLAASPD 50 (93)
T ss_dssp CCCCCEEECC-CCEEEETTSCEEEEEEESS-SSCCCEEEE-TTEECCCBTT
T ss_pred CCCcEeeccC-cceEEeCCCCEEEEEEECC-CCCeEEEEE-CCEECcCCCC
Confidence 4567888875 5567888999999999998 568999996 8988876543
No 31
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.80 E-value=4.9e-09 Score=62.43 Aligned_cols=51 Identities=22% Similarity=0.567 Sum_probs=40.5
Q ss_pred cCCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 13 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 13 ~~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
......|.|+..|. .+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+....
T Consensus 9 ~~~~~~~~i~~~p~-~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~g~~l~~~~ 59 (106)
T 1nct_A 9 SKTTLAARILTKPR-SMTVYEGESARFSCDTDGEPVPTVTWLR-KGQVLSTSA 59 (106)
T ss_dssp CCSSCCCEEEECCC-CEEESSSSCEECCEEEECSSCCBCCBCS-SSSCCTTCS
T ss_pred CCCCCCCEEEECCC-CEEEeCCCcEEEEEEEEEcCCCEEEEEE-CCEECCCCC
Confidence 34456788988854 5567889999999999999999999986 777665433
No 32
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=7.3e-09 Score=61.88 Aligned_cols=48 Identities=27% Similarity=0.525 Sum_probs=38.7
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
....+|.|+..| ..+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 4 ~~~~pP~i~~~p-~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~g~~~~~ 51 (118)
T 2eo9_A 4 GSSGPPVIRQGP-VNQTVAVDGTFVLSCVATGSPVPTILWRK-DGVLVST 51 (118)
T ss_dssp SCCCSCCCSBCC-CCEEEETTCEEEEECBCCCSSCCEEEEEE-SSSBCCT
T ss_pred CCCCCCEEEcCC-CCEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcC
Confidence 345688888875 44567788899999999999999999997 7776643
No 33
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.76 E-value=5.2e-08 Score=65.20 Aligned_cols=50 Identities=12% Similarity=0.331 Sum_probs=41.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|+..+.+.+.+..|+.+.|.|.|.|+|.|+|+|++ ||.++.....
T Consensus 206 ~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~-~g~~i~~~~~ 255 (315)
T 1itb_B 206 PTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW-NGSVIDEDDP 255 (315)
T ss_dssp CCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEE-TTEECCTTCS
T ss_pred CCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEE-CCEECCcccc
Confidence 4678887765555667889899999999999999999997 8988876543
No 34
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.75 E-value=9.9e-09 Score=61.37 Aligned_cols=49 Identities=14% Similarity=0.313 Sum_probs=41.7
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
....+|.|+..+++.+.+..|+.+.|.|.+ ++|.|+|+|++ ||..+...
T Consensus 11 ~~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k-~g~~l~~~ 59 (104)
T 1pd6_A 11 DEKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLK-NGQEIQMS 59 (104)
T ss_dssp CCSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEE-SSSEECCC
T ss_pred CccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEE-CCEECCCC
Confidence 446788999998887778899999999999 79999999997 78777654
No 35
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.74 E-value=6.9e-09 Score=60.55 Aligned_cols=46 Identities=26% Similarity=0.567 Sum_probs=31.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
..+|.|+..| ..+....|+.+.|.|.+.|+|.|+|+|++ ||..+..
T Consensus 8 ~~~P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~ 53 (108)
T 3kvq_A 8 RVAPTITGNL-ENQTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVE 53 (108)
T ss_dssp ---CCCBSCC-CCEEEETTCCEEEECBCC----CCEEEEE-SSSBCCC
T ss_pred cCCCceecCC-CCeEEeCCCeEEEEEECcCcCCCeEEEEE-CCeEccc
Confidence 4578888875 45567788899999999999999999997 6665543
No 36
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.74 E-value=2.3e-08 Score=64.11 Aligned_cols=48 Identities=27% Similarity=0.543 Sum_probs=38.8
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
....+|.|+..|.+ +.+..|+.+.|.|.+.|+|.|+|+|++ ||..+..
T Consensus 2 ~~~~~P~~~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~k-~~~~~~~ 49 (212)
T 2yd6_A 2 TGETPPRFTRTPVD-QTGVSGGVASFICQATGDPRPKIVWNK-KGKKVSN 49 (212)
T ss_dssp --CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCCCCeEEeCcce-eEEecCCeEEEEEEEeeCCCCEEEEEE-CCcCCCC
Confidence 34678999998655 567788899999999999999999997 7776643
No 37
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=1.3e-08 Score=59.43 Aligned_cols=49 Identities=22% Similarity=0.578 Sum_probs=39.5
Q ss_pred CCccceEEEcCCCc--EEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNR--IDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~--v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.++..|... +.+..|+.+.|.|.+.|.|.| |+|++ ||..+....
T Consensus 4 ~~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~g~~~~~~~ 54 (104)
T 2e6p_A 4 GSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYK-DGQKVEESE 54 (104)
T ss_dssp CCSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEE-TTEECCCBT
T ss_pred CCCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEee-CCEECCCCC
Confidence 34678888887664 567788899999999999999 99996 788775543
No 38
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.73 E-value=6.9e-08 Score=61.72 Aligned_cols=46 Identities=33% Similarity=0.633 Sum_probs=38.1
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
...+|.|+..|.+ +.+..|+.+.|.|.+.|+|.|+|+|++ ||..+.
T Consensus 3 g~~pP~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~ 48 (212)
T 2yd1_A 3 GAHPPEIIRKPQN-QGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVS 48 (212)
T ss_dssp --CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred CCCCCEEEcCCCc-eEEecCCEEEEEEEEccCCCCeEEEEE-CCEECC
Confidence 3578999998655 567788899999999999999999997 787775
No 39
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.72 E-value=1.1e-08 Score=59.29 Aligned_cols=46 Identities=20% Similarity=0.233 Sum_probs=36.6
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
+..+|.|... +..+.+..|+.+.|.|.|.|.| |+|+|++ ||..+..
T Consensus 6 ~~~pp~~~~~-~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k-~g~~~~~ 51 (95)
T 2ckn_A 6 QAQPWGVPVE-VESLLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLVE 51 (95)
T ss_dssp SSCSCCBTTB-BCCEEECTTSCEEEECCEESSC-CEEEEEB-TTBCCCC
T ss_pred CCCCCEEEcC-cceEEEcCCCeEEEEEECCCCC-CceEEEE-CCEecCC
Confidence 3456777766 4556678898999999999998 8999997 8877654
No 40
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.72 E-value=2e-08 Score=59.51 Aligned_cols=40 Identities=13% Similarity=0.311 Sum_probs=32.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCC---CeEEEEeCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIWIRSD 57 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~---P~I~W~~~d 57 (74)
-.|.|+..| +.+.+..|+.++|.|.+.|.|. |+|+|++++
T Consensus 3 p~p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~ 45 (108)
T 3cx2_A 3 PIGLFVMRP-QDGEVTVGGSITFSARVAGASLLKPPVVKWFKGK 45 (108)
T ss_dssp CCCSCSBCC-CCEEEETTCCEEEEEEEECC-CCSCCEEEEEETT
T ss_pred CccEEEeCC-CcEEEeCCCCEEEEEEECCCccCCCcEEEEccCC
Confidence 458898886 4556788989999999999999 999999843
No 41
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.70 E-value=4.1e-09 Score=69.61 Aligned_cols=44 Identities=20% Similarity=0.444 Sum_probs=31.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
.+|.+... +....+.+|+.+.|.|.|.|.|.|+|+|+++||...
T Consensus 105 ~p~~~~~~-~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~ 148 (203)
T 4fa8_A 105 KPLTLSVH-SERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEP 148 (203)
T ss_dssp EEEEEEEE-EEECCSSCSCCEEEEEEEEEESCCEEEECCC-----
T ss_pred CCceeeec-ceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeec
Confidence 35556555 445556788889999999999999999998777553
No 42
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.70 E-value=9.6e-08 Score=60.27 Aligned_cols=47 Identities=17% Similarity=0.513 Sum_probs=39.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.|.+...++....+..|+.+.|.|.+.|+|.|+|+|++ ||.++....
T Consensus 116 ~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~ 162 (212)
T 2r15_A 116 RARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALAQTD 162 (212)
T ss_dssp SCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEE-TTEEECCCS
T ss_pred CCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEE-CCeECccCC
Confidence 56677777777778889899999999999999999996 788876544
No 43
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.70 E-value=3.9e-08 Score=57.79 Aligned_cols=48 Identities=10% Similarity=0.192 Sum_probs=38.6
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.|+..| .++.+..|+.+.|.|.+.|.|.| |+|++ ||..+....
T Consensus 5 ~~~~p~~~~~~-~~~~v~~G~~v~l~C~~~~~~~~-v~W~k-~g~~~~~~~ 52 (106)
T 2dlt_A 5 SSGQLEVLQDI-ADLTVKAAEQAVFKCEVSDEKVT-GKWYK-NGVEVRPSK 52 (106)
T ss_dssp SCCCCCEEECC-CCEEEESSCCEECCCEESCSSCE-EEEEE-SSCBCCCCS
T ss_pred CCCCCEEecCC-CCeEEeCCCeEEEEEEEcCCCcc-eEEEc-CCEECcCCC
Confidence 45678888885 45567888899999999999998 99997 777765544
No 44
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.69 E-value=2.9e-08 Score=68.09 Aligned_cols=50 Identities=26% Similarity=0.519 Sum_probs=40.2
Q ss_pred CccceEEEcCCCcEE--ecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRID--FSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~--~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|+.+|.+.+. ..+|+.+.|.|.+.|+|.|+|+|++ ||..+...++
T Consensus 2 ~~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k-~g~~~~~~~~ 53 (382)
T 1cs6_A 2 SYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKM-NGTELKMGPD 53 (382)
T ss_dssp CEEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEE-TTEECCCSTT
T ss_pred CCCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEE-CCEECCcCCC
Confidence 468999999876653 1577789999999999999999997 7888765443
No 45
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.68 E-value=1.5e-08 Score=59.33 Aligned_cols=46 Identities=15% Similarity=0.326 Sum_probs=36.1
Q ss_pred ccce-EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 17 LGPI-FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 17 ~~P~-fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.+|. |+.. +..+.+..|+.+.|.|.+.| |.|+|+|++ ||..+....
T Consensus 5 ~~p~~~~~~-~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~l~~~~ 51 (103)
T 1x44_A 5 SSGIMVTKQ-LEDTTAYCGERVELECEVSE-DDANVKWFK-NGEEIIPGP 51 (103)
T ss_dssp CSSCCCSBC-CCCEEEETTEEEEEEEECSS-SSCCCEEEE-TTEECCCST
T ss_pred CCCceeecc-CCCEEEECCCCEEEEEEecC-CCCeEEEEE-CCEECCCCC
Confidence 4555 5555 55667788989999999999 889999996 788876554
No 46
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.68 E-value=1.1e-07 Score=59.13 Aligned_cols=48 Identities=27% Similarity=0.391 Sum_probs=39.7
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
...+|.|+..|. .+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+...
T Consensus 4 ~~~~P~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~ 51 (197)
T 3lcy_A 4 SGEAPGIRKEMK-DVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQS 51 (197)
T ss_dssp CCEEEEEEECCC-CEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECCC
T ss_pred cCCCCcccccCC-ceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCCC
Confidence 457899998864 5567888899999999999999999997 77776543
No 47
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.68 E-value=1.2e-07 Score=62.44 Aligned_cols=49 Identities=18% Similarity=0.413 Sum_probs=40.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|...|. .+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+.....
T Consensus 3 ~~pP~~~~~p~-~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~ 51 (284)
T 2rik_A 3 MAPPFFDLKPV-SVDLALGESGTFKCHVTGTAPIKITWAK-DNREIRPGGN 51 (284)
T ss_dssp CCCCEEEECCC-CEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCSSSS
T ss_pred cCCCEEEcccc-ceEecCCCcEEEEEEEEcCCCCEEEEEE-CCEECcCCCc
Confidence 46899999865 5567788899999999999999999997 7877765443
No 48
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.67 E-value=1.4e-07 Score=59.08 Aligned_cols=46 Identities=24% Similarity=0.590 Sum_probs=37.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
..+|.|+..| ..+.+..|+.+.|.|.+.|.|.|.|+|++ ||..+..
T Consensus 2 ~~~P~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 47 (197)
T 2j8h_A 2 AMAPHFKEEL-RNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIA 47 (197)
T ss_dssp -CCCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCC
T ss_pred CCCCEEEEcC-CccEEcCCCEEEEEEEEeecCCCEEEEEE-CCEECcc
Confidence 3679999886 45567888899999999999999999997 7777653
No 49
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.66 E-value=7.9e-08 Score=61.71 Aligned_cols=49 Identities=18% Similarity=0.398 Sum_probs=39.0
Q ss_pred cCCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 13 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 13 ~~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.....+|.| ..| ..+.+..|+.+.|.|.|.|+|.|+|+|.+ ||..+...
T Consensus 14 ~~~~~~P~~-~~p-~~~~~~~G~~v~l~C~~~g~p~p~i~W~~-~g~~l~~~ 62 (215)
T 3mtr_A 14 GSHMYAPKL-QGP-VAVYTWEGNQVNITCEVFAYPSATISWFR-DGQLLPSS 62 (215)
T ss_dssp -CCCEEEEE-ECC-SEEEECTTCCEEEEEEEEEESCCEEEEEE-TTEESSCS
T ss_pred cceecCCcc-cCC-ceEEEECCCCEEEEEEEeecCCCEEEEEE-CCeECCCC
Confidence 344567888 454 45778889999999999999999999997 78877654
No 50
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.66 E-value=2.8e-08 Score=57.98 Aligned_cols=40 Identities=15% Similarity=0.339 Sum_probs=33.2
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCc
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGL 67 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~ 67 (74)
..++....|+.+.|.|.+.| |.|.|+|++ ||.+|......
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k-~g~~l~~~~~~ 42 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYK-DGERLASQGRV 42 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEE-TTEECCCCSSE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEE-CCEEccccccE
Confidence 35677889999999999988 999999996 89988765443
No 51
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.66 E-value=5.8e-08 Score=60.52 Aligned_cols=47 Identities=28% Similarity=0.514 Sum_probs=38.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
..+|.|+..|. .+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+...
T Consensus 3 ~~~P~~~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~ 49 (194)
T 2a38_A 3 TQAPTFTQPLQ-SVVVLEGSTATFEAHISGFPVPEVSWFR-DGQVISTS 49 (194)
T ss_dssp CEEEEEEECCC-CEEEETTSCEEEEEEEEEESCCEEEEEE-SSSBCCTT
T ss_pred CCCCeEEccCC-ceEEECCCEEEEEEEEEecCCCEEEEEE-CCEEcccc
Confidence 46899998864 4567788899999999999999999997 77766544
No 52
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=3.1e-08 Score=57.79 Aligned_cols=47 Identities=4% Similarity=0.180 Sum_probs=37.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
..+|.|+..| .++.+..|+.+.|.|.+.|.| |+|+|++ ||..+....
T Consensus 6 ~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~-~~v~W~k-~g~~i~~~~ 52 (101)
T 2edk_A 6 SGPVLIVTPL-EDQQVFVGDRVEMAVEVSEEG-AQVMWMK-NGVELTRED 52 (101)
T ss_dssp CCCCCEEECC-CCEEEESSCCCBCCEEESCSS-CCCEEEE-SSCBCCCSC
T ss_pred cCCCEEEecC-CceEEcCCCCEEEEEEEeCCC-CEEEEEE-CCEECCCCC
Confidence 3467787764 556778898999999999999 9999997 787776544
No 53
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.65 E-value=3.8e-08 Score=57.32 Aligned_cols=45 Identities=11% Similarity=0.251 Sum_probs=36.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
..+|.|+..| ..+.+..|+.+.|.|.+.|.|.| |+|++ ||..+..
T Consensus 6 ~~pp~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~~ 50 (103)
T 2e7b_A 6 SGPVRFQEAL-KDLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLRP 50 (103)
T ss_dssp CCCCCCTBCC-CCEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCCC
T ss_pred CCCCEEEecC-ccEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECCC
Confidence 4567887764 55667889899999999999999 99997 6766643
No 54
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=1.9e-08 Score=58.20 Aligned_cols=49 Identities=18% Similarity=0.411 Sum_probs=39.1
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
....+|.|...|... .+..|+.+.|.|.|.|+|.|+|+|++ ||..+...
T Consensus 6 ~~~~~~~i~~~p~~~-~v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~ 54 (96)
T 2ens_A 6 SGLEEVQLVVEPEGG-AVAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLPLP 54 (96)
T ss_dssp CCCCSCCCEEESTTS-EECTTCEEEEECCCSSCSSCCCCCEE-SSSBCSSC
T ss_pred CCCCCCEEEECCCCC-EEcCCCeEEEEEEEccCCCCEEEEEE-CCEECcCC
Confidence 345678888886555 46788889999999999999999997 77776543
No 55
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=4.5e-08 Score=58.09 Aligned_cols=48 Identities=15% Similarity=0.210 Sum_probs=38.1
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
...+|.|+.. +.++.+.+|+.+.|.|.+ .|.|+|+|++ ||.++.....
T Consensus 4 ~~~p~~~~~~-~~~~~v~~G~~v~l~C~v--~p~p~v~W~k-~g~~l~~~~r 51 (100)
T 2yuz_A 4 GSSGLKILTP-LTDQTVNLGKEICLKCEI--SENIPGKWTK-NGLPVQESDR 51 (100)
T ss_dssp SSCCCCCSBC-CCCEEEETTSCCCEEEEC--SSCCCEEEEE-TTEECCCCSS
T ss_pred CCCCCEEecc-CCceEEcCCCCEEEEEEe--CCCCeEEEEE-CCEECCCCCc
Confidence 3456788777 456677889999999999 8999999996 8888865443
No 56
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.64 E-value=8.3e-08 Score=70.44 Aligned_cols=50 Identities=20% Similarity=0.483 Sum_probs=41.1
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
+..+|.|+.. .+.+.+..|+.++|.|.+.|+|.|+|+|++ ||..+...+.
T Consensus 2 v~~pP~f~~~-~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k-~g~~l~~~~~ 51 (570)
T 3b43_A 2 AMEPPYFIEP-LEHVEAAIGEPITLQCKVDGTPEIRIAWYK-EHTKLRSAPA 51 (570)
T ss_dssp CCCCCEEEEC-CCCEEECTTSCEEEEEEEESSSSCEEEEEC-SSSBCCCCSS
T ss_pred CCCCCcceEE-CCceEEcCCCEEEEEEEEccCCCCEEEEEE-CCEEccCCCC
Confidence 4578999865 667778899999999999999999999996 7777765443
No 57
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.64 E-value=1.7e-07 Score=62.24 Aligned_cols=46 Identities=24% Similarity=0.581 Sum_probs=38.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
..+|.|+..|. .+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 2 ~~~P~~~~~p~-~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~ 47 (305)
T 2nzi_A 2 AMAPHFKEELR-NLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIA 47 (305)
T ss_dssp CCCCEEEECCC-CEEECTTCCEEEEEEEECSSCCEEEEEE-TTEECCC
T ss_pred CCCCeeeeccc-ceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCEEccc
Confidence 35899999965 5668889999999999999999999997 6776643
No 58
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.62 E-value=1.7e-07 Score=53.78 Aligned_cols=46 Identities=20% Similarity=0.342 Sum_probs=36.4
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~dG~~i~~ 63 (74)
..+|.|+..|... .+..|+.++|.|.|.|.| .|+|+|.+ ||..+..
T Consensus 8 ~~~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~i~W~k-~~~~~~~ 55 (112)
T 3so5_A 8 FPXPQITVQPETQ-SAIXGSDVSFTCSAASSSDSPMTFAWXX-DNEALQD 55 (112)
T ss_dssp CCSCEEEECCCCE-EECTTCCEEEEEEEEESCCCCCEEEEEE-TTEECTT
T ss_pred CCCCeEEeCCCCc-EEECCCCEEEEEEEecCCCCCEEEEEcc-CCccccc
Confidence 5688999886544 677888999999999664 68999997 7776654
No 59
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.62 E-value=8.4e-08 Score=62.91 Aligned_cols=43 Identities=16% Similarity=0.478 Sum_probs=36.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG~~i~~ 63 (74)
+|.|+..+ + ..+.+|..++|.|.|.|. |.|+|+|++ ||.++..
T Consensus 117 ~P~~~~~~-~-~~v~~g~~v~l~C~v~g~~P~p~i~W~k-~g~~l~~ 160 (207)
T 3rbs_A 117 GPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYK-DEREISV 160 (207)
T ss_dssp SSEEEEEE-E-EEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECC
T ss_pred CCceEecC-C-cEEcCCCcEEEEEEEeCCCCCCEEEEEE-CCEECCC
Confidence 78888775 3 556788889999999999 999999996 8888854
No 60
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.62 E-value=1.1e-07 Score=60.56 Aligned_cols=48 Identities=27% Similarity=0.634 Sum_probs=39.7
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
....+|.|+..|. .+.+..|+.+.|.|.+.|+|.|+|+|++ ||..+..
T Consensus 5 ~~~~~P~i~~~p~-~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~ 52 (217)
T 2vr9_A 5 GQYQSPRIIEHPT-DLVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVST 52 (217)
T ss_dssp -CCCCCEEEECCC-CEEECTTSCEEECCEEECSSCCEEEEEE-TTEECCC
T ss_pred cccCCCEEecCCC-ceEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccC
Confidence 3467899999864 5567889999999999999999999997 7777654
No 61
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.61 E-value=7.4e-08 Score=60.56 Aligned_cols=46 Identities=22% Similarity=0.458 Sum_probs=38.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEc-ccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~-G~P~P~I~W~~~dG~~i~~~ 64 (74)
++|.|+..| +.+.+..|+.+.|.|.+. |.|.|+|+|++ ||..+...
T Consensus 1 e~~~~~~~p-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~~ 47 (195)
T 2c5d_C 1 EESPFVGNP-GNITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILELA 47 (195)
T ss_dssp -CCSEEECC-CCEEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCSC
T ss_pred CCCeeccCh-hheEEecCCcEEEecccccCCCCcEEEEEE-CCEEcccC
Confidence 368899985 555678898999999999 99999999997 78877554
No 62
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.61 E-value=6.4e-08 Score=64.78 Aligned_cols=46 Identities=33% Similarity=0.555 Sum_probs=33.3
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
...+|.|+..|.+ +.+..|+.+.|.|.+.|+|.|+|+|++ ||..+.
T Consensus 3 ~~~~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~i~W~k-~g~~i~ 48 (304)
T 2yd9_A 3 GEEPPRFIKEPKD-QIGVSGGVASFVCQATGDPKPRVTWNK-KGKKVN 48 (304)
T ss_dssp -CCCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEC--------
T ss_pred CccCCeeeecCCc-eEecCCCeEEEEEEEEEeCCCeEEEEE-CCEECC
Confidence 4578999998654 456788899999999999999999986 676653
No 63
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=5.7e-08 Score=56.52 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=37.0
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
..+|.|+..| ..+.+..|+.+.|.|.+.| |.|+|+|++ ||..+....
T Consensus 6 ~~pp~~~~~~-~~~~v~~G~~v~l~C~~~~-~~~~v~W~k-~g~~~~~~~ 52 (103)
T 2edf_A 6 SGPAAIIKPL-EDQWVAPGEDVELRCELSR-AGTPVHWLK-DRKAIRKSQ 52 (103)
T ss_dssp CCCCCEEECC-CCEEECTTSCEEECCEESS-SSCCCCEEE-SSCBCCCSS
T ss_pred CCCcEEEecC-CccEEcCCCCEEEEEEEeC-CCCcEEEEE-CCEEccCCC
Confidence 4567777775 4567888999999999999 999999997 777765443
No 64
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.60 E-value=8.7e-08 Score=55.38 Aligned_cols=48 Identities=17% Similarity=0.331 Sum_probs=37.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
...|.|++.| ..+.+..|+.+.|.|.+ |.|.|.|+|++ ||..+.....
T Consensus 6 ~~~~~~~~~~-~~~~v~~G~~v~l~C~~-~~p~~~v~W~k-~~~~l~~~~~ 53 (95)
T 2k1m_A 6 KPVSAFSKKP-RSVEVAAGSPAVFEAET-ERAGVKVRWQR-GGSDISASNK 53 (95)
T ss_dssp CCCCCCSBCC-CCEEEETTSCEEEEEEC-SSSSCCCEEEC-SSSEECSSTT
T ss_pred CCCCeeEeCC-CcEEEeCCCcEEEEEEe-CCCCCeEEEEE-CCEECCCCCc
Confidence 3457777775 55567888899999999 89999999996 7877765443
No 65
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.59 E-value=9.8e-08 Score=56.51 Aligned_cols=31 Identities=19% Similarity=0.529 Sum_probs=26.6
Q ss_pred CCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 34 TTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 34 g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
+..+.|.|.|.|+|.|+|+|++ ||.++....
T Consensus 16 ~~~~~~~c~v~G~P~P~i~W~k-~g~~l~~~~ 46 (103)
T 1wwb_X 16 DHHWCIPFTVKGNPKPALQWFY-NGAILNESK 46 (103)
T ss_dssp CCEEEEEEEEECSSCCEEEEEE-TTEEECCCS
T ss_pred CcEEEEEEEEEEeCCCEEEEEE-CCEECCCCC
Confidence 4568999999999999999996 888887654
No 66
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.59 E-value=1.5e-07 Score=62.58 Aligned_cols=47 Identities=17% Similarity=0.473 Sum_probs=39.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
..|.++..+++.+.+..|+.+.|.|.|.|+|.|+|+|++ ||..+...
T Consensus 220 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~~~~~ 266 (317)
T 2y25_A 220 NRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK-NEKALASD 266 (317)
T ss_dssp TSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEE-SSSEECCC
T ss_pred CCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEE-CCEeCCCC
Confidence 467788887887788899999999999999999999997 67776543
No 67
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.56 E-value=3.1e-08 Score=59.50 Aligned_cols=45 Identities=20% Similarity=0.404 Sum_probs=36.0
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~i~~ 63 (74)
..+|.|.. | ..+....|..+.|.|.|.|+|.|. |+|.+ ||..+..
T Consensus 12 ~~~P~i~~-~-~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~-~~~~l~~ 57 (122)
T 2cry_A 12 NGPPIISS-T-QTQHALHGEKGQIKCFIRSTPPPDRIAWSW-KENVLES 57 (122)
T ss_dssp CSSCCEEE-E-CCCCCCTTSCCCCCEEECCSSCCSEEEEES-SSCEECS
T ss_pred ecCCCccC-C-CeEEEecCCCEEEEEEEeecCCCcEeEEEE-CCEEccC
Confidence 46788888 4 444567888999999999999998 99996 6766654
No 68
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.56 E-value=1.3e-07 Score=58.87 Aligned_cols=47 Identities=21% Similarity=0.357 Sum_probs=38.4
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
...+|.|+.. +..+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+..
T Consensus 4 ~~~~P~i~~~-~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~~ 50 (192)
T 2iep_A 4 LPKAPVITTP-LETVDALVEEVATFMCAVESYPQPEISWTR-NKILIKL 50 (192)
T ss_dssp CCEEEEESSC-CCEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCT
T ss_pred cCCCceeecC-ccceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEccc
Confidence 4567887766 566677889899999999999999999997 7777653
No 69
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.55 E-value=1.4e-07 Score=59.32 Aligned_cols=47 Identities=28% Similarity=0.632 Sum_probs=38.6
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
...+|.|+..| ..+.+..|+.+.|.|.+.|+|.|+|+|++ ||..+..
T Consensus 6 ~~~pp~i~~~p-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 52 (212)
T 2v9r_A 6 EDFPPRIVEHP-SDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVET 52 (212)
T ss_dssp CCEEEEEEECC-CCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred ccCCcceecCC-CceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEeec
Confidence 35688999885 45567889899999999999999999997 6776643
No 70
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.55 E-value=1.6e-07 Score=54.09 Aligned_cols=41 Identities=20% Similarity=0.315 Sum_probs=33.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEc-ccCCCeEEEEeCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSD 57 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~-G~P~P~I~W~~~d 57 (74)
.+|.+..+++..+.+..|+.+.|.|.+. |.|.|+|+|++++
T Consensus 8 ~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~ 49 (98)
T 1gl4_B 8 KPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLH 49 (98)
T ss_dssp -CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGG
T ss_pred CCcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCC
Confidence 4556667767777788999999999999 7999999999853
No 71
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.55 E-value=5.6e-08 Score=66.62 Aligned_cols=47 Identities=23% Similarity=0.454 Sum_probs=40.3
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
...+|.|...++..+.+.+|+.+.|.|.+.|+|.|+|+|++ ||..+.
T Consensus 13 ~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~g~~l~ 59 (404)
T 3p3y_A 13 LTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTR-NSRFFN 59 (404)
T ss_dssp CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEE-TTEECC
T ss_pred ccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEE-CCEEee
Confidence 35789999887777778889999999999999999999997 777654
No 72
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.54 E-value=1.7e-07 Score=59.45 Aligned_cols=33 Identities=15% Similarity=0.447 Sum_probs=27.9
Q ss_pred CCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCc
Q psy11558 34 TTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGL 67 (74)
Q Consensus 34 g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~ 67 (74)
+..+.|.|.|.|+|+|+|+|++ ||.+|...+..
T Consensus 15 ~~~~~l~c~v~G~P~P~I~W~k-nG~~l~~~~~~ 47 (126)
T 1he7_A 15 MHHWCIPFSVDGQPAPSLRWLF-NGSVLNETSFI 47 (126)
T ss_dssp CCEEEEEEEECCSSCCEEEEEE-TTEECCCCSSE
T ss_pred CccEEEEEEEeeeCCCeEEEEE-CCEECCCCCce
Confidence 4469999999999999999996 89998776543
No 73
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.54 E-value=5.6e-08 Score=61.78 Aligned_cols=52 Identities=15% Similarity=0.463 Sum_probs=39.1
Q ss_pred cccCCCccceEEEcCC---CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 11 AAEDDTLGPIFIKEPP---NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 11 ~~~~~~~~P~fv~~Pp---~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.......+|.|+..|. ....+..|+.+.|.|.+.|.|.|+|+|++ ||..+..
T Consensus 8 ~~~~~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~ 62 (231)
T 3ojm_B 8 ENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQ 62 (231)
T ss_dssp -----CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCG
T ss_pred cccCCccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccc
Confidence 3445567899987752 55667789999999999999999999997 7777654
No 74
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.53 E-value=1.3e-07 Score=58.75 Aligned_cols=45 Identities=24% Similarity=0.674 Sum_probs=33.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
+|.|+..| ..+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+...
T Consensus 2 ~~~~~~~p-~~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~ 46 (182)
T 1rhf_A 2 GLKLMGAP-VKLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQNL 46 (182)
T ss_dssp -----CCC-EEEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCSS
T ss_pred CCEEEeCC-cceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCCC
Confidence 57788775 55667888899999999999999999997 78776543
No 75
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.53 E-value=1.8e-07 Score=65.22 Aligned_cols=46 Identities=22% Similarity=0.466 Sum_probs=37.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.|+..+. ......|..+.|.|.|.|+|.|+|+|++ ||.++...
T Consensus 294 ~~P~~~~~~~-~~~v~~g~~v~l~C~~~g~P~p~i~W~k-~g~~l~~~ 339 (384)
T 3kld_A 294 AQPNWVQIIN-DIHVAMEESVFWECKANGRPKPTYRWLK-NGDPLLTR 339 (384)
T ss_dssp EEEEEEECCC-CEEECTTCCEEEECEEEEESCCEEEEEE-TTEECCCB
T ss_pred cCCccccCCC-ceEecCCCCEEEEeECCccCCCeEEEEE-CCEECCCC
Confidence 4788888754 4567788899999999999999999996 78877543
No 76
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.52 E-value=3.6e-07 Score=57.30 Aligned_cols=45 Identities=20% Similarity=0.393 Sum_probs=36.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC-CCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS-DGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~-dG~~i~ 62 (74)
.+|.+...|. ......|..+.|.|.|.|+|.|+|+|.++ ||.++.
T Consensus 91 ~~p~~~~~~~-~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 91 AAPDITGHKR-SENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp CCCEEEEECS-EEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred cCCcccccCC-cceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 4677877754 44567888899999999999999999986 677764
No 77
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.52 E-value=1.3e-07 Score=54.54 Aligned_cols=42 Identities=10% Similarity=0.127 Sum_probs=32.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
..+|.|+..|. .+.+..|+.++|.|.+.|.|.|.|+|.+.++
T Consensus 4 ~~~p~~~~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~ 45 (108)
T 3m45_A 4 KGSQGQFPLTQ-NVTVVEGGTAILTCRVDQNDNTSLQWSNPAQ 45 (108)
T ss_dssp ----CCCEECC-CEEEETTSCEEEEEEESSCSSCCEEEECTTC
T ss_pred ccCCCccccCC-eeEEEeCCcEEEEeEEcCCCccEEEEEcCCC
Confidence 45678888855 5567788899999999999999999997554
No 78
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.52 E-value=2.6e-07 Score=57.15 Aligned_cols=46 Identities=22% Similarity=0.460 Sum_probs=33.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.|.|+..|... .+..|+.+.|.|.+.|.|.|.|+|++ ||..+....
T Consensus 2 ~~~~~~~~~~~-~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~ 47 (189)
T 2v5t_A 2 MLTFREVVSPQ-EFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTIS 47 (189)
T ss_dssp CCEEEECCSSE-EEETTSCEEECCEEECSSCCEEEEEC------CBCC
T ss_pred CceeeccCCCE-EEeCCCcEEEEEEEcCCCCCEEEEEE-CCccceecc
Confidence 58899886554 57788899999999999999999996 566555433
No 79
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.51 E-value=5.6e-08 Score=61.66 Aligned_cols=32 Identities=22% Similarity=0.553 Sum_probs=28.9
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
|+.+.+..|+.++|.|.|.|+|.|+|+|++++
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g 56 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAI 56 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEEC
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECC
Confidence 56778889999999999999999999999855
No 80
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=7.2e-08 Score=57.32 Aligned_cols=47 Identities=15% Similarity=0.283 Sum_probs=36.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCC-CeEEEEeCCCeeecCCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~-P~I~W~~~dG~~i~~~~~ 66 (74)
+|.|+.. ++++.+.+|+.+.|.|.+.|.|. |+|+|++ ||.++.....
T Consensus 8 p~~~~~~-~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k-~g~~i~~~~r 55 (104)
T 2eny_A 8 HVGITKR-LKTMEVLEGESCSFECVLSHESASDPAMWTV-GGKTVGSSSR 55 (104)
T ss_dssp CCCCSBC-CCCEEEESSCCEEEEEECSSCCCSSCBCCBS-SSSBCSBCSS
T ss_pred CCEEEec-CCCcEEcCCCcEEEEEEEcCCCCCceeEEEE-CCEECCCCCC
Confidence 4456665 56667888999999999999985 4899985 8888765443
No 81
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.50 E-value=1.1e-07 Score=55.29 Aligned_cols=47 Identities=13% Similarity=0.273 Sum_probs=36.9
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
...+|.|+..| ..+.+..|+.+.|.|. .|.|.|+|+|++ ||..+...
T Consensus 5 ~~~pp~~~~~~-~~~~v~~G~~v~l~C~-~~~p~~~v~W~k-~~~~l~~~ 51 (103)
T 2dku_A 5 SSGANCFTEEL-TNLQVEEKGTAVFTCK-TEHPAATVTWRK-GLLELRAS 51 (103)
T ss_dssp SCCCCCCSSCC-CCEEEETTSEEEEEEE-CSSCCSCCEEEE-SSCBCCSS
T ss_pred CCCCCEeEecC-CcEEEeCCCcEEEEEE-eCCCCCeEEEEe-CCEECCCC
Confidence 34577887775 5566788989999999 599999999997 67766543
No 82
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.50 E-value=5.4e-07 Score=55.83 Aligned_cols=45 Identities=33% Similarity=0.684 Sum_probs=36.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i~~ 63 (74)
.+|.+...|.. ..+..|+.+.|.|.|.|+|.| +|+|.+ ||..+..
T Consensus 97 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~ 142 (182)
T 1rhf_A 97 GVPFFTVEPKD-LAVPPNAPFQLSCEAVGPPEPVTIVWWR-GTTKIGG 142 (182)
T ss_dssp CSCEEEECCCC-EEECTTCCEEEEEEEECSSSCCEEEEEE-TTEECSC
T ss_pred cCCeEEecCcc-eEecCCCEEEEEeEecCCCCCCEEEEEc-CCeECCC
Confidence 46778877544 567788899999999999999 999997 7776643
No 83
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.50 E-value=2.8e-07 Score=57.41 Aligned_cols=45 Identities=27% Similarity=0.437 Sum_probs=36.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.+...| ....+..|+.+.|.|.|.|+|.|+|+|.+ ||..+..
T Consensus 99 ~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~ 143 (191)
T 1epf_A 99 QKLMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVIL 143 (191)
T ss_dssp CCSEEEECC-SSEECCTTSCEEECCEEECSSCCEEEEEE-TTEEGGG
T ss_pred cCceEecCC-CcEeecCCCeEEEEEEECCCCCCEEEEEE-CCEEeec
Confidence 467777775 44457788899999999999999999997 7777653
No 84
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.50 E-value=5.3e-07 Score=57.70 Aligned_cols=46 Identities=30% Similarity=0.435 Sum_probs=35.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
..|.+...|.. ..+..|+.+.|.|.|.|+|.|+|+|++ ||.++...
T Consensus 107 ~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~l~~~ 152 (212)
T 2yd6_A 107 GFPTIDMGPQL-KVVERTRTATMLCAASGNPDPEITWFK-DFLPVDTS 152 (212)
T ss_dssp TCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEE-TTEEC---
T ss_pred CcceeecCCcc-eeEecCCCEEEEEEecCCCCCeEEEEE-CCccccCc
Confidence 34788887544 456778889999999999999999997 78777654
No 85
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.48 E-value=3e-07 Score=56.98 Aligned_cols=46 Identities=24% Similarity=0.458 Sum_probs=36.9
Q ss_pred cceEEEcCC-CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPP-NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp-~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
+|.|...++ ..+.+..|+.+.|.|.+.|.|.|+|+|++ ||..+...
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~ 48 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEEN 48 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCCS
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCCC
Confidence 577776644 35667789899999999999999999997 77776544
No 86
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.48 E-value=8.4e-07 Score=55.64 Aligned_cols=47 Identities=26% Similarity=0.677 Sum_probs=37.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCCeeecCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVGDV 64 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i~~~ 64 (74)
..+|.|...|.. ..+..|+.+.|.|.|.|.|.| +|+|.+ ||.++...
T Consensus 104 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~-~~~~~~~~ 151 (195)
T 2c5d_C 104 EGLPYFLEEPED-RTVAANTPFNLSCQAQGPPEPVDLLWLQ-DAVPLATA 151 (195)
T ss_dssp CCSCEEEECCCC-EEECTTCCEEEEEEEECSSCCCEEEEEE-SSCBSSSS
T ss_pred ecCCeEEcCCCc-EEEcCCCEEEEEeECCCCCCCCEEEEEE-CCEeccCC
Confidence 346888887544 567788889999999999999 999997 67666543
No 87
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.48 E-value=8.4e-07 Score=55.16 Aligned_cols=47 Identities=17% Similarity=0.405 Sum_probs=37.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.+|.+...+. ......|..+.|.|.+.|.|.|+++|.+ ||..+....
T Consensus 102 ~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~ 148 (194)
T 2a38_A 102 APPNFVQRLQ-SMTVRQGSQVRLQVRVTGIPTPVVKFYR-DGAEIQSSL 148 (194)
T ss_dssp EEEEEEECCC-CEEECTTEEEEEEEEEEEESCCEEEEEE-TTEECCCSS
T ss_pred CCCEEEeCCc-cEEEcCCCEEEEEEEEEEecCCeEEEEE-CCEECCCCC
Confidence 5677777754 4557788889999999999999999997 788776543
No 88
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.47 E-value=1.8e-07 Score=55.78 Aligned_cols=44 Identities=18% Similarity=0.467 Sum_probs=31.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.+|.++..+...+ ..+..|.|.|.|+|.|+|+|++ ||..+....
T Consensus 7 ~pP~i~~~~~~~~----~~~~~l~C~~~g~P~p~i~W~k-~g~~l~~~~ 50 (118)
T 1wwc_A 7 YPPRVVSLEEPEL----RLEHCIEFVVRGNPPPTLHWLH-NGQPLRESK 50 (118)
T ss_dssp CCCCCCCCCCCCC----CCEEEEEEEEECSSCCEEEEEE-TTEECCCSS
T ss_pred cCCceeccCCCee----ccceEEEEEeeeeCCCeEEEEE-CCEECCCCC
Confidence 4566655533332 2457999999999999999996 788876544
No 89
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.46 E-value=2.3e-07 Score=63.52 Aligned_cols=46 Identities=17% Similarity=0.544 Sum_probs=38.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.|...|...+.+..|+.+.|.|.|.|+|.|+|+|++ ||.++..
T Consensus 307 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~ 352 (395)
T 1bih_A 307 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSH-NAKPLSG 352 (395)
T ss_dssp EEEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEE-TTEECCS
T ss_pred cCCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEE-CCEECCC
Confidence 478888887664677889899999999999999999997 7877653
No 90
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.46 E-value=1e-06 Score=57.93 Aligned_cols=50 Identities=24% Similarity=0.450 Sum_probs=40.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.|+..++....+..|+.+.|.|.+.|+|.|+|+|++ ||..+.....
T Consensus 96 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~~~ 145 (284)
T 2rik_A 96 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQESSK 145 (284)
T ss_dssp ECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCCSSS
T ss_pred cCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEE-CCEECcCCCc
Confidence 3467888877776667788899999999999999999997 7777765443
No 91
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.46 E-value=4e-07 Score=54.16 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=31.4
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcc--cCCCeEEEEeCCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARG--SPNPEIIWIRSDG 58 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G--~P~P~I~W~~~dG 58 (74)
..+...|++.+.+..|+.+.|.|.|.| .|.|+|+|.++++
T Consensus 8 ~~v~i~p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~ 49 (122)
T 3s35_X 8 YDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSS 49 (122)
T ss_dssp EEEEEESCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCT
T ss_pred EEEEEcCCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCc
Confidence 345567778777788989999999999 5567999997544
No 92
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.45 E-value=4.1e-07 Score=59.01 Aligned_cols=38 Identities=16% Similarity=0.301 Sum_probs=31.5
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
+..+|++.+...+|+.++|.|.|.|.|.|.|+|.+.++
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~ 40 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQID 40 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTC
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCC
Confidence 55677777666688899999999999999999997543
No 93
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.45 E-value=2.9e-07 Score=61.92 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=35.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i 61 (74)
.+|.+...+.......+|+.++|.|.|.|+|.| .|+|++ ||.++
T Consensus 215 ~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~-~~~~l 259 (313)
T 4fqp_A 215 YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWST-TMGPL 259 (313)
T ss_dssp EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEE-CCEEC
Confidence 467777666666667778889999999999999 699997 55554
No 94
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.45 E-value=8.8e-07 Score=55.06 Aligned_cols=45 Identities=18% Similarity=0.258 Sum_probs=36.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
..+|.+...++ ......|+.+.|.|.|.|+|.|+|+|.+ ||..+.
T Consensus 111 ~~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 155 (201)
T 3s97_C 111 PYPADIVVQFK-DVYALMGQNVTLECFALGNPVPDIRWRK-VLEPMP 155 (201)
T ss_dssp CEEEEEEEECC-CEEEETTCCEEEEEEEEEESCCEEEEEE-TTBCCC
T ss_pred CCCCceEecCC-ceEEecCCcEEEEEEccCCCCCceEEEe-CCCcCC
Confidence 35677888766 5567788889999999999999999997 565554
No 95
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.45 E-value=1.3e-07 Score=60.95 Aligned_cols=48 Identities=23% Similarity=0.585 Sum_probs=36.9
Q ss_pred CCccceEEEcC---CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEP---PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~P---p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
+..+|.|+..+ +..+.+.+|+.+.|.|.+.|+|.|+|+|++ ||..+..
T Consensus 8 ~~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~ 58 (241)
T 3grw_A 8 DTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRG 58 (241)
T ss_dssp ---CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECCG
T ss_pred cCCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccCC
Confidence 35678887543 456778889999999999999999999997 7777654
No 96
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.45 E-value=7.9e-07 Score=57.35 Aligned_cols=50 Identities=14% Similarity=0.192 Sum_probs=36.6
Q ss_pred cCCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 13 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 13 ~~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
......+.|+..|. .+.+..|+.+.|.|.+.|+|.|+|+|++ +|..+...
T Consensus 13 ~~~~~~~~i~~~p~-~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~ 62 (218)
T 3k0w_A 13 GLVPRGSKITVNPE-SKAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIPNG 62 (218)
T ss_dssp ------CCEEECCC-CEEEETTSBEEEECEETTTTSSEEEEEE-TTEECTTC
T ss_pred CccCCCCEEEECCC-CeEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECCCC
Confidence 34567788999865 4567788899999999999999999997 67766543
No 97
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=1.1e-07 Score=55.38 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=29.6
Q ss_pred CCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
+|..+.+..|..+.|.|.|.|.| |+|+|++ ||.++..
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k-~g~~~~~ 45 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLR-DGVQLAE 45 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEE-SSSBCCC
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEE-CCEECCC
Confidence 35555677888999999999988 8999997 6766643
No 98
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.42 E-value=4e-07 Score=60.86 Aligned_cols=45 Identities=22% Similarity=0.486 Sum_probs=37.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.|...|.. ..+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 204 ~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~~-~~~~l~~ 248 (304)
T 2yd9_A 204 VAPRFSILPMS-HEIMPGGNVNITCVAVGSPMPYVKWMQ-GAEDLTP 248 (304)
T ss_dssp EEEEEEECCCC-BCCCTTCCEEEEEEEEEESCCEEEEEE-TTEECSC
T ss_pred cCCcEEecCCc-eEEcCCCeEEEEEEEeeeCCCEEEEEE-CCEECCC
Confidence 57888887654 456788889999999999999999997 7877754
No 99
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=1.1e-07 Score=59.59 Aligned_cols=43 Identities=21% Similarity=0.509 Sum_probs=35.6
Q ss_pred ccCCCccceEEEcCCCcEEecCCCCeEEEEEEccc---CCCeEEEEe
Q psy11558 12 AEDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGS---PNPEIIWIR 55 (74)
Q Consensus 12 ~~~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~---P~P~I~W~~ 55 (74)
.+.....+.|+..| +++.+.+|++++|+|.+.|. |.|+|+|++
T Consensus 6 ~~~~~~~~~f~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K 51 (118)
T 2edn_A 6 SGAEEPTGVFLKKP-DSVSVETGKDAVVVAKVNGKELPDKPTIKWFK 51 (118)
T ss_dssp CCCCCCSSSCSBCC-CCCEEETTSCEECCEEEETTTSSSCCCCEEEE
T ss_pred CCccCCcceEEECC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEee
Confidence 44455677899996 56678899999999999986 899999998
No 100
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.41 E-value=2.3e-07 Score=56.15 Aligned_cols=40 Identities=13% Similarity=0.385 Sum_probs=33.1
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
+..++..+.+..|++++|.|.+.|.|.|.|+|++.++..+
T Consensus 4 ~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~ 43 (124)
T 3rbg_A 4 LTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTI 43 (124)
T ss_dssp CCCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEE
T ss_pred ccCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEE
Confidence 3445677778899999999999999999999997666544
No 101
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=4e-07 Score=56.29 Aligned_cols=44 Identities=7% Similarity=0.085 Sum_probs=35.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
+|.|+.. ++++.+.+|+.++|.|.++| .|+++|++ ||.+|....
T Consensus 8 ~~~~~~~-l~d~~v~eG~~a~f~C~vs~--~p~v~W~k-nG~~l~~~~ 51 (112)
T 2e6q_A 8 TARLVAG-LEDVQVYDGEDAVFSLDLST--IIQGTWFL-NGEELKSNE 51 (112)
T ss_dssp CCCEEEC-CCCEEEETTCEEEEEEEESS--CCCCEEEE-SSCBCCSSC
T ss_pred CcEEecC-CCCeEEcCCCcEEEEEEECC--CCeEEEEE-CCEECccCc
Confidence 4567777 45667888999999999999 88999996 898887654
No 102
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.39 E-value=5.9e-07 Score=59.60 Aligned_cols=48 Identities=15% Similarity=0.368 Sum_probs=38.6
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.|+.. . ++.+.+|+.+.|.|.+.|. |.|+|+|++ ||..+....
T Consensus 4 ~~~~P~~~~~-~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~ 52 (317)
T 2y25_A 4 PFTGPHFVEY-L-SWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDE 52 (317)
T ss_dssp SSSCCEEEEE-E-EEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCSC
T ss_pred ccCCCcEeee-e-eEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCCC
Confidence 4578999854 4 4677889999999999998 889999997 787776443
No 103
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.38 E-value=2.4e-07 Score=58.71 Aligned_cols=37 Identities=19% Similarity=0.432 Sum_probs=31.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc---CCCeEEEEe
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS---PNPEIIWIR 55 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~---P~P~I~W~~ 55 (74)
.|.|+.+| +++.+.+|++++|+|.+.|. |.|+|+|++
T Consensus 7 ~~~F~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~K 46 (126)
T 2dav_A 7 GILFIEKP-QGGTVKVGEDITFIAKVKAEDLLRKPTIKWFK 46 (126)
T ss_dssp SCSCCSCC-CCCEEETTCCEEEEEEEECCCSSSCCEEEEEE
T ss_pred ccEEEEcC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEee
Confidence 36799996 55567889999999999986 999999998
No 104
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.38 E-value=9e-07 Score=60.58 Aligned_cols=44 Identities=32% Similarity=0.581 Sum_probs=34.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC-CCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS-DGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~-dG~~i~~ 63 (74)
+|.|+. |++.. +.+|+.+.|.|.|.|+|.|+|+|+++ +|..+..
T Consensus 1 ~P~i~~-~~~~~-~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~ 45 (389)
T 2jll_A 1 QPHIIQ-LKNET-TYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 45 (389)
T ss_dssp CCEEEE-CCCEE-EETTSEEEEEEEEECSSCCEEEEEETTTTEEECC
T ss_pred CCeEEe-cCceE-EeCCCeEEEEEEeecccCCeEEEEeCCCCceecc
Confidence 477777 45543 55688899999999999999999985 2877754
No 105
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.38 E-value=3.7e-06 Score=53.57 Aligned_cols=44 Identities=27% Similarity=0.526 Sum_probs=35.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.|.+...| ....+..|+.+.|.|.+.|+|.|+|+|.+ ||..+..
T Consensus 110 ~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~~-~~~~~~~ 153 (212)
T 2yd1_A 110 FPVITQGP-GTRVIEVGHTVLMTCKAIGNPTPNIYWIK-NQTKVDM 153 (212)
T ss_dssp CCEEEECC-CCEEEETTCCEEECCEEECSSCCEEEEEE-TTEECCT
T ss_pred CCeeEeCC-CceEeecCCeEEEEEEeccCCCCeEEEEE-CCeEccc
Confidence 37888875 44456778889999999999999999997 7777654
No 106
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=1.3e-06 Score=51.29 Aligned_cols=50 Identities=22% Similarity=0.399 Sum_probs=38.3
Q ss_pred CCCccceEEEcCCCc--EEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 14 DDTLGPIFIKEPPNR--IDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~--v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
....+|.++..|.+. +....|+.+.|.|.+. +|.|+|+|++ ||..+....
T Consensus 6 ~v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~ 57 (113)
T 2cpc_A 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTK-DGEEVVESP 57 (113)
T ss_dssp CCCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEE-TTEECCCBT
T ss_pred ccccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEE-CCEECccCC
Confidence 345678888886552 4566788899999996 8999999997 788775543
No 107
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.36 E-value=6e-07 Score=55.93 Aligned_cols=44 Identities=23% Similarity=0.435 Sum_probs=32.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
.+|.|...+.. ..+..|+.+.|.|.+.|+|.|+|+|.+ ||..+.
T Consensus 95 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~-~~~~~~ 138 (189)
T 2v44_A 95 QKLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVT 138 (189)
T ss_dssp CCCEEESCCCS-EEEETTSCEEECCEEECSSCCEEEEEE-EC--CE
T ss_pred cCCceeecCCc-EEEeCCCCEEEEEEECcCCCCcEEEEE-CCcEEe
Confidence 35666655433 456788889999999999999999997 565554
No 108
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.36 E-value=1.2e-06 Score=64.26 Aligned_cols=52 Identities=25% Similarity=0.476 Sum_probs=40.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCce
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGLR 68 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~r 68 (74)
..+|.|+..++....+..|..+.|.|.|.|+|.|+|+|++ ||..+......+
T Consensus 288 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k-~~~~l~~~~~~~ 339 (570)
T 3b43_A 288 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK-DETEIQESSKFR 339 (570)
T ss_dssp BCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEE-TTEECCCSSSEE
T ss_pred ecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeE-CCEECCCCCcEE
Confidence 4578888876555445678889999999999999999996 788776555433
No 109
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.35 E-value=8e-07 Score=60.80 Aligned_cols=46 Identities=22% Similarity=0.650 Sum_probs=37.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.|+..|. ...+..|+.+.|.|.|.|+|.|+|+|++ ||..+...
T Consensus 311 ~~p~~~~~~~-~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~ 356 (404)
T 3p3y_A 311 AAPYWLDEPK-NLILAPGEDGRLVCRANGNPKPTVQWMV-NGEPLQSA 356 (404)
T ss_dssp EEEEEEECCC-CEEECTTCCEEEECEEEEESCCEEEEEE-TTEEGGGS
T ss_pred CCCeeeccCC-cceeecCCcEEEEEEccccCCCceEEEE-CCEecCCC
Confidence 4678887754 4567788899999999999999999997 78877644
No 110
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.35 E-value=2.8e-06 Score=54.74 Aligned_cols=45 Identities=20% Similarity=0.378 Sum_probs=36.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
+|.+...|. ...+..|..+.|.|.|.|+|.|+|+|++ ||..+...
T Consensus 118 ~p~~~~~~~-~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~~~~~~~~ 162 (218)
T 3k0w_A 118 KLQICVEPT-SQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHE 162 (218)
T ss_dssp SCEEEECCC-CEEECTTCCEEEECEEEBSSCCEEEEEE-TTEECTTC
T ss_pred CceEEECCC-ceeecCCCcEEEEEEecccCCCeEEEEE-CCEECCCC
Confidence 377777754 4457788889999999999999999997 78776543
No 111
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.35 E-value=1.2e-06 Score=51.62 Aligned_cols=44 Identities=16% Similarity=0.236 Sum_probs=34.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.|+..|.+ +.+..|+.+.|.|.+.|. |+|+|++ ||..+...
T Consensus 18 ~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~l~~~ 61 (113)
T 2edh_A 18 LPIKFTEGLRN-EEATEGATAVLRCELSKM--APVEWWK-GHETLRDG 61 (113)
T ss_dssp SCCCEEECCCC-CEECTTSCEEEEEEESSC--CCCEEEE-SSSBCCCS
T ss_pred CCCcccccCCc-eEEeCCCeEEEEEEECCC--CcEEEEE-CCEECCCC
Confidence 45688887554 467888899999999985 8899997 77776543
No 112
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.34 E-value=5.9e-07 Score=52.53 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=35.2
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
...+|.|+..| ..+.+..|+.+.|.|.+.|. |.|+|++ ||..+..
T Consensus 5 ~~~pp~~~~~~-~~~~v~~G~~v~l~C~~~~~--p~v~W~k-~~~~~~~ 49 (108)
T 2dm7_A 5 SSGPARFTQDL-KTKEASEGATATLQCELSKV--APVEWKK-GPETLRD 49 (108)
T ss_dssp SCCCCCBCSCC-BCCEEETTSCEEEEEEBSSS--CCCEEES-SSSBCCS
T ss_pred cCCCCeeeecC-CcEEEeCCCcEEEEEEeCCC--CeeEEEE-CCEECCC
Confidence 34678888775 55667889899999999986 7899996 6766654
No 113
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.34 E-value=1.9e-06 Score=56.59 Aligned_cols=45 Identities=16% Similarity=0.271 Sum_probs=36.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC-CCeEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~P~I~W~~~dG~~i~~ 63 (74)
+|.+..+|.+ +.+..|+.+.|.|.+.|.| .|+|+|.+.||..+..
T Consensus 2 ~~~v~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~ 47 (291)
T 1qz1_A 2 VLQVDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSP 47 (291)
T ss_dssp CCCEEEESSS-EEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCS
T ss_pred CcceEecCCC-ceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECcc
Confidence 4677888654 4577888999999999998 7999999878887753
No 114
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.33 E-value=2.9e-07 Score=65.90 Aligned_cols=47 Identities=17% Similarity=0.338 Sum_probs=38.4
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+.+|.++..++..+.+..|+.++|.|.|.|+|.|+|+|++ +|..+
T Consensus 380 ~~C~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~-~~~~~ 426 (477)
T 2id5_A 380 FTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLS-PRKHL 426 (477)
T ss_dssp SCCEEEEESCCSCEEEEEETTCCEEECCCEEEESCCEEEEEC-TTSCB
T ss_pred eEeccccccccccccEEEeCCCeEEEEEeccccCCCEEEEEE-CCccc
Confidence 345677777776778888899999999999999999999997 55444
No 115
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.33 E-value=5.7e-07 Score=57.95 Aligned_cols=44 Identities=9% Similarity=0.224 Sum_probs=34.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
+|.+...++..+.+.+|..+.|.|.|.|.|.|+|+|++ ||.++.
T Consensus 135 ~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k-~~~~~~ 178 (250)
T 2fbo_J 135 SNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYT-GPTFFE 178 (250)
T ss_dssp CSCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEE-EEECSS
T ss_pred CCeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEe-CCCccc
Confidence 34555565666667778899999999999999999997 666553
No 116
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.33 E-value=8.4e-07 Score=55.18 Aligned_cols=44 Identities=16% Similarity=0.288 Sum_probs=35.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC-CCeEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~P~I~W~~~dG~~i~ 62 (74)
++.|...|+ .+.+..|+.+.|.|.+.|.| .|.|+|++.||..+.
T Consensus 2 p~~v~~~p~-~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~ 46 (191)
T 1epf_A 2 VLQVDIVPS-QGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS 46 (191)
T ss_dssp -CCEEEESS-SEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEEC
T ss_pred ceEEEecCC-CcEEcCCCCEEEEEECCCCCCCceEEEEeCCCcccc
Confidence 456777754 44577888999999999988 999999986888776
No 117
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.33 E-value=1.4e-06 Score=54.08 Aligned_cols=46 Identities=24% Similarity=0.591 Sum_probs=36.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.+...| ....+..|..+.|.|.+.|+|.|+|+|.+ ||..+...
T Consensus 99 ~~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~~-~~~~~~~~ 144 (192)
T 2iep_A 99 MKPKITRPP-INVKIIEGLKAVLPCTTMGNPKPSVSWIK-GDSALREN 144 (192)
T ss_dssp EEEEEEECC-CCEEEETTSCEEECCEEEEESCCEEEEEE-TTEECCCC
T ss_pred eCCccccCC-cceEEeCCCcEEEEEEEeccCCceEEEEe-CCEEccCC
Confidence 356777664 45567788889999999999999999997 77776543
No 118
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.32 E-value=7.4e-07 Score=55.69 Aligned_cols=37 Identities=14% Similarity=0.321 Sum_probs=30.3
Q ss_pred cEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 28 RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 28 ~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.+....|+.+.|.|.|.|+|.|+|+|.+ ||..+....
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~~ 149 (197)
T 2j8h_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNNG 149 (197)
T ss_dssp EEEEETTCCCEEEEEEEEESCCEEEEEE-SSCEECSSS
T ss_pred eEEEeCCCEEEEEEEEEecCCCcEEEEE-CCEEeecCC
Confidence 4456678889999999999999999997 777776443
No 119
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.32 E-value=1.1e-06 Score=60.09 Aligned_cols=45 Identities=22% Similarity=0.406 Sum_probs=36.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.+...| ....+..|+.+.|.|.|.|+|.|+|+|++ ||..+..
T Consensus 306 ~~p~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~i~W~~-~g~~i~~ 350 (388)
T 2v5m_A 306 APLSAKIDP-PTQTVDFGRPAVFTCQYTGNPIKTVSWMK-DGKAIGH 350 (388)
T ss_dssp EEEEEEEES-SEEEECTTSCEEEEEEEEEECCCEEEEEE-TTEECSC
T ss_pred CCCccccCC-CcEEecCCCCEEEEEEeccccCCeEEEEE-CCEECcc
Confidence 356666665 44567788899999999999999999997 7887754
No 120
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.31 E-value=1.6e-06 Score=59.40 Aligned_cols=46 Identities=22% Similarity=0.515 Sum_probs=37.4
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.|+..|. ......|+.+.|.|.|.|.|.|+|+|++ ||.++...
T Consensus 293 ~~p~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~ 338 (382)
T 1cs6_A 293 AQPDWLDVIT-DTEADIGSDLRWSCVASGKPRPAVRWLR-DGQPLASQ 338 (382)
T ss_dssp EEEEEEECCC-CEEEETTCCEEEECEEEEESCCEEEEEE-TTEECCCC
T ss_pred cCCCcccCCC-ccEEcCCCeEEEEEEeeeecCCEEEEEE-CCEECCCC
Confidence 4678887754 4457788899999999999999999997 78877544
No 121
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.31 E-value=7.2e-07 Score=61.02 Aligned_cols=49 Identities=18% Similarity=0.384 Sum_probs=39.2
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCCeeecCCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~~i~~~~ 65 (74)
...+|.|+..| ..+.+.+|+.+.|.|.+.| .|.|+|+|++ ||..+....
T Consensus 3 v~~~P~~~~~p-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~~~ 52 (395)
T 1bih_A 3 VDKYPVLKDQP-AEVLFRENNPTVLECIIEGNDQGVKYSWKK-DGKSYNWQE 52 (395)
T ss_dssp --CCCEECCCC-SEEEEETTSCEEECCCEESCCSSCEEEEEE-SSSBCCTTT
T ss_pred cCCCCEeecCC-CceEEeCCCEEEEEEEEecCCCCceEEEEE-CCcCccccc
Confidence 35789999885 5566788999999999999 9999999997 777765443
No 122
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.28 E-value=1.4e-06 Score=49.87 Aligned_cols=39 Identities=18% Similarity=0.446 Sum_probs=30.4
Q ss_pred cCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.+|..+.+..|+.+.|.|.+.| .|.|+|.+ ||..+....
T Consensus 6 ~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k-~g~~~~~~~ 44 (95)
T 4hwu_A 6 SQPEAYVVAPGESLELQCMLKD--AAVISWTK-DGVHLGPNN 44 (95)
T ss_dssp --CEEEEECTTSCEEEECCCCT--TCEEEEEE-TTEEECCCS
T ss_pred cCCCcEEECCCCEEEEEEEeCC--CCEEEEEE-CCEECCCCc
Confidence 3466667888999999999998 58999996 788875543
No 123
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.28 E-value=1.5e-06 Score=53.68 Aligned_cols=46 Identities=24% Similarity=0.500 Sum_probs=33.3
Q ss_pred cceEEEcCCC-cEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPN-RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~-~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
+|.+...+.. ......|..+.|.|.+.|+|.|+|+|++ ||..+...
T Consensus 96 ~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~-~g~~~~~~ 142 (189)
T 2v5t_A 96 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEEN 142 (189)
T ss_dssp EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEE-TTEECCCS
T ss_pred CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEE-CCEECcCC
Confidence 4444443322 3445678889999999999999999997 78776543
No 124
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.27 E-value=1.7e-06 Score=55.93 Aligned_cols=44 Identities=18% Similarity=0.373 Sum_probs=36.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i~~ 63 (74)
+|.|+.+|+.. .+..|+.+.|.|.+.|.|.| +|+|++ ||..+..
T Consensus 1 kP~i~~~p~~~-~v~~G~~v~l~C~~~~~~~~~~~~W~~-~g~~~~~ 45 (262)
T 3rjd_A 1 KAVITLQPPWV-SVFQEETVTLHCEVLHLPGSSSTQWFL-NGTATQT 45 (262)
T ss_dssp CCEEEESSCCS-EEETTCCEEEEEECSSCCCTTCEEEEE-TTEECSC
T ss_pred CCeEecCCCcE-EeeCCCeEEEEEECCCCCCCceEEEEE-CCEEeec
Confidence 48899997664 45678889999999999999 999997 7887744
No 125
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.27 E-value=3.1e-06 Score=51.92 Aligned_cols=48 Identities=19% Similarity=0.410 Sum_probs=37.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccC-CCeEEEEeCCCeeecCCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~P~I~W~~~dG~~i~~~~~ 66 (74)
-.|.+..+|+.. .+..|+.+.|.|.+.|.| .++++|++ ||..+.....
T Consensus 3 p~p~i~~~p~~~-~v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~~~~ 51 (170)
T 3ry4_A 3 PKAVLKLEPPWI-NVLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPTHTQ 51 (170)
T ss_dssp CBCEEEEESCCS-EEETTCEEEEEEESCCCSSSSCEEEEE-TTEECTTCCS
T ss_pred CCCEEEeCCCCe-EEECCCcEEEEEEecCCCCcceEEEEE-CCeEcccCcc
Confidence 467888887654 356788899999999998 78999997 8888765433
No 126
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.26 E-value=2.9e-06 Score=58.12 Aligned_cols=50 Identities=20% Similarity=0.331 Sum_probs=37.8
Q ss_pred cCCCccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCCeeecCC
Q psy11558 13 EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 13 ~~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~~i~~~ 64 (74)
........|..+|++. .+.+|+.++|.|.+.| .|.|+|+|++ ||..+...
T Consensus 16 ~~~~~~~~~~~~P~~~-~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~~~ 66 (403)
T 3laf_A 16 HGGRRSLHFVSEPSDA-VTMRGGNVLLNCSAESDRGVPVIKWKK-DGLILALG 66 (403)
T ss_dssp ---CCSSEEEECCCCE-EECTTCCEEECCEEECTTCCCEEEEEE-TTEECCTT
T ss_pred cCCceeEEEEeCCCce-EEecCCcEEEEEEcCCCCCCceEEEEE-CCEECccC
Confidence 4456677888886554 5678889999999987 6899999996 88877543
No 127
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.26 E-value=3.7e-06 Score=53.97 Aligned_cols=47 Identities=21% Similarity=0.484 Sum_probs=37.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC---CCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS---DGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~---dG~~i~~ 63 (74)
..|.+...++....+..|..+.|.|.+.|.|.|+|+|.+. ||..+..
T Consensus 112 ~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~ 161 (241)
T 3grw_A 112 HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGP 161 (241)
T ss_dssp CCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCT
T ss_pred CCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCC
Confidence 4566666666776777888999999999999999999973 6666543
No 128
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.26 E-value=2.4e-06 Score=56.16 Aligned_cols=45 Identities=27% Similarity=0.437 Sum_probs=35.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.|...| ....+..|+.+.|.|.+.|.|.|+|+|.+ ||..+..
T Consensus 99 ~~~~~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~-~~~~~~~ 143 (291)
T 1qz1_A 99 QKLMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWKH-KGRDVIL 143 (291)
T ss_dssp CCSEEEECC-SSEEEETTSCEEECCEEECSSCCEEEEEE-TTSCSST
T ss_pred ccccccCCC-CcccccCCCeEEEEEEeccCCCCEEEEEE-CCEEccc
Confidence 456777765 44456788899999999999999999997 6665543
No 129
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.26 E-value=1.3e-06 Score=55.47 Aligned_cols=45 Identities=24% Similarity=0.462 Sum_probs=33.8
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~~i~ 62 (74)
..+|.+...++... ...|+.++|.|.|.| .|.|+|+|++ ||..+.
T Consensus 112 ~~~p~v~~~~~~~~-~~~g~~v~l~C~~~g~~P~~~v~W~k-~g~~~~ 157 (213)
T 3nl4_L 112 PVAPTVLIFPPSAD-LVATGTVTIVCVANKYFPDVTVTWEV-DGTTQT 157 (213)
T ss_dssp CBCCEEEEECCCHH-HHTTSEEEEEEEEEEEBSCCEEEEEE-TTEECC
T ss_pred CcCCeEEEeCCchh-hccCCcEeEEEEEecccCCcEEEEEe-CCccCC
Confidence 45666666555442 345778999999999 9999999997 787765
No 130
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.26 E-value=1.9e-06 Score=59.05 Aligned_cols=45 Identities=24% Similarity=0.641 Sum_probs=36.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.|...| ..+....|..+.|.|.|.|+|.|+|+|.+ ||..+..
T Consensus 311 ~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~v~W~~-~g~~~~~ 355 (403)
T 3laf_A 311 VPPWFLNHP-SNLYAYESMDIEFECAVSGKPVPTVNWMK-NGDVVIP 355 (403)
T ss_dssp EEEEEEECC-CCEECCTTCCEEECCEEEEESCCEEEEEE-TTEECCC
T ss_pred CCCcEeecC-cceEEecCCeEEEEEEEeeccCCEEEEEE-CCEECCC
Confidence 467787775 44557788889999999999999999997 7776644
No 131
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=7.5e-07 Score=51.58 Aligned_cols=46 Identities=22% Similarity=0.543 Sum_probs=34.1
Q ss_pred cceEEEcCC--CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 18 GPIFIKEPP--NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 18 ~P~fv~~Pp--~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
++.|+..++ ..+.+..|+.+.|.|.+. .|.|.|+|++ ||..+....
T Consensus 8 p~~~~~~~~~~~~~~v~~G~~v~L~C~~~-~p~~~v~W~k-~g~~~~~~~ 55 (102)
T 2eo1_A 8 KVVFAKEQPAHREVQAEAGASATLSCEVA-QAQTEVTWYK-DGKKLSSSS 55 (102)
T ss_dssp CCCSCSSCCSCEEEEEETTCCEEECCBCS-CSSSCCEEEE-TTEECCCCS
T ss_pred CEEecCcCCCcccEEEeCCCcEEEEEEec-CCCCceEEEE-CCEECCCCC
Confidence 344554432 345677888999999999 8999999996 788775544
No 132
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.25 E-value=6e-07 Score=55.82 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=36.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEE-EcccCC-CeEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECT-ARGSPN-PEIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~-A~G~P~-P~I~W~~~dG~~i 61 (74)
.|.|..+++..+.+..|+.+.|.|. +.|.|. |+|+|++ ||..+
T Consensus 7 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~-~~~~~ 51 (201)
T 3s97_C 7 LDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLL-NEFPV 51 (201)
T ss_dssp ECCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEE-SSTTC
T ss_pred CCccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEE-CCcee
Confidence 4567777778888899999999999 999999 9999997 55444
No 133
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.25 E-value=1.4e-06 Score=55.33 Aligned_cols=32 Identities=31% Similarity=0.616 Sum_probs=27.5
Q ss_pred ecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 31 FSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
...|+.+.|.|.|.|.|.|+|+|.+++|..+.
T Consensus 128 ~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 128 DPVTSEHELTCQAEGYPKAEVIWTSSDHQVLS 159 (222)
T ss_dssp ETTTTEEEEEEEEEEBSCCEEEEEETTCCEEC
T ss_pred ecCCCcEEEEEEecCCCCCeEEEEECCCceec
Confidence 45677899999999999999999987687654
No 134
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.24 E-value=2.4e-06 Score=53.45 Aligned_cols=44 Identities=11% Similarity=0.271 Sum_probs=33.7
Q ss_pred ccceEEEcCCCcEEecC-CCCeEEEEEEcccCC--CeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSN-TTGAQVECTARGSPN--PEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~-g~~v~L~C~A~G~P~--P~I~W~~~dG~~i~~ 63 (74)
.+|.++.. ++. .+.+ |+.+.|.|.+.|.|. |+|+|++ ||..+..
T Consensus 2 ~~P~i~~~-~~~-~v~~~G~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~~ 48 (190)
T 2wv3_A 2 NEPRIVTS-EEV-IIRDSLLPVTLQCNLTSSSHTLMYSYWTK-NGVELTA 48 (190)
T ss_dssp -CCEEEEC-CCE-ECCCSSSCEEEEEEEEECSSCEEEEEEEE-TTEECTT
T ss_pred CCCccccc-ceE-EEccCCceEEEEEEeccCCCCceEEEEEE-CCEECcc
Confidence 46787774 443 3555 888999999999998 9999997 7777654
No 135
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.23 E-value=1.6e-06 Score=51.14 Aligned_cols=36 Identities=17% Similarity=0.370 Sum_probs=29.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+++. |..+....|++++|.|.+.|.|.|.|.|++.+
T Consensus 4 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (108)
T 1jhl_L 4 LTQS-PSYLVASPGETITINCRASKSISKSLAWYQEK 39 (108)
T ss_dssp EEEE-CSEEEECTTSCEEEEEEESSCCTTCEEEEEEC
T ss_pred eecc-CCeeEEcCCCCEEEEeEECCCCCceEEEEEEC
Confidence 3454 55566788999999999999999999999853
No 136
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.23 E-value=8.4e-07 Score=55.44 Aligned_cols=41 Identities=12% Similarity=0.430 Sum_probs=33.2
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCe
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 59 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~ 59 (74)
+..+..++..+.+..|+.+.|.|.+.|.|.|.|+|+++++.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~ 44 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGD 44 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETT
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCc
Confidence 44455556777788899999999999999999999985543
No 137
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.22 E-value=2.6e-06 Score=55.25 Aligned_cols=47 Identities=13% Similarity=0.300 Sum_probs=37.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCeeecCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGDV 64 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~i~~~ 64 (74)
...|.+..+|+.. .+.+|+.++|.|.+.|.|.|. |+|++ ||..+...
T Consensus 5 ~p~p~i~~~p~~~-~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~~ 52 (204)
T 3sgj_C 5 LPKAVVFLEPQWY-RVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISSQ 52 (204)
T ss_dssp -CBCEEEEESCCS-EEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESCC
T ss_pred CCCCeEEEcCCCe-EEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEcccC
Confidence 4578899997654 466788999999999999987 99997 78877543
No 138
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.21 E-value=2.7e-06 Score=58.19 Aligned_cols=47 Identities=19% Similarity=0.349 Sum_probs=36.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.+|.|... +..+....|+.+.|.|.|.|+|.|+|+|.+ ||..+....
T Consensus 99 ~~P~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~l~~~~ 145 (389)
T 2jll_A 99 YAPKFISN-QTIYYSWEGNPINISCDVKSNPPASIHWRR-DKLVLPAKN 145 (389)
T ss_dssp EEEEECCS-CCEEEECTTCCEEEEECEEEESCCEEEEEE-TTEESSCTT
T ss_pred eCCEEecC-cceEEeccCCEEEEEEEEEecCCCeEEEEE-CCccCCccc
Confidence 46666654 444456778889999999999999999997 788776543
No 139
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.21 E-value=4.5e-06 Score=51.61 Aligned_cols=38 Identities=11% Similarity=0.239 Sum_probs=30.8
Q ss_pred CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 27 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 27 ~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.......|..+.|.|.+.|.|.|+|+|.+ ||..+....
T Consensus 111 ~~~~~~~g~~~~l~C~~~~~p~p~v~W~~-~~~~~~~~~ 148 (197)
T 3lcy_A 111 EKYYGAVGSTLRLHVMYIGRPVPAMTWFH-GQKLLQNSE 148 (197)
T ss_dssp SEEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred cceeecCCCeEEEEEEEeeeeCCeeEEeE-CCEECCCCC
Confidence 34455678889999999999999999997 788776544
No 140
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.20 E-value=4.1e-06 Score=51.99 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=35.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccC-CCeEEEEe---CCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIR---SDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~P~I~W~~---~dG~~i~ 62 (74)
.+|.+...| .......|+.+.|.|.|.|+| .|+|+|++ +++..+.
T Consensus 82 ~~P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~ 130 (184)
T 3b5h_A 82 GPPRVKAVK-SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALM 130 (184)
T ss_dssp CSCCCEESC-SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECC
T ss_pred cCCceeecC-CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEee
Confidence 467777775 444567888999999999999 89999998 4555443
No 141
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.19 E-value=3.8e-06 Score=53.16 Aligned_cols=45 Identities=22% Similarity=0.482 Sum_probs=34.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC---CCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS---DGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~---dG~~i~ 62 (74)
+|.+....+....+..|..+.|.|.+.|+|.|+|+|.+. ||..+.
T Consensus 117 ~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~ 164 (231)
T 3ojm_B 117 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYG 164 (231)
T ss_dssp CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBC
T ss_pred CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCcccc
Confidence 455555545666677888999999999999999999973 666553
No 142
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.18 E-value=5.8e-06 Score=51.37 Aligned_cols=44 Identities=20% Similarity=0.386 Sum_probs=34.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.|+.. ++.+.+..|+.+.|.|.+.|.|. .|+|++.||..+....
T Consensus 4 ~~~~~-~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~ 47 (189)
T 2v44_A 4 QVTIS-LSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQ 47 (189)
T ss_dssp EEEES-CSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCS
T ss_pred EEEec-CCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCc
Confidence 35555 56667788999999999999988 9999987888765443
No 143
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.18 E-value=1.9e-06 Score=53.93 Aligned_cols=37 Identities=16% Similarity=0.443 Sum_probs=30.8
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCe
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 59 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~ 59 (74)
..++..+.+.+|+.+.|.|.+.|.|.|.|+|+++++.
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~ 41 (212)
T 1f97_A 5 YTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGS 41 (212)
T ss_dssp ECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETT
T ss_pred EecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCc
Confidence 3446677788899999999999999999999985543
No 144
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.17 E-value=2.1e-06 Score=61.75 Aligned_cols=47 Identities=4% Similarity=-0.012 Sum_probs=35.0
Q ss_pred ccceEEEcCC-CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPP-NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp-~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.+...|. ..+.+.+|+.+.|.|.|.|+|.|+|+|++ ||.+|...
T Consensus 323 ~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k-~g~~l~~~ 370 (423)
T 3qs7_E 323 EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCE 370 (423)
T ss_dssp SSCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECB
T ss_pred eCCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE-CCEECCCc
Confidence 3555555543 34556678889999999999999999996 78887543
No 145
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.17 E-value=2.5e-06 Score=55.75 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=34.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEc-ccCCCeEEEEeCCCeeecCCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~-G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
.|.|+... .+.+.+|+.+.|.|.+. |+|.|+|+|++ ||.+|.....
T Consensus 3 ~p~~~~~~--~~~v~eg~~v~l~c~~~~~~P~p~i~W~k-ng~~l~~~~~ 49 (207)
T 3rbs_A 3 DPFTKSEL--AVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPK 49 (207)
T ss_dssp ---CCEEE--EEEECGGGCEEEEEECSCCCSCCEEEEEE-TTEEECSSSS
T ss_pred CCeeecCC--ceEEEeCCeEEEEEEEecCCCCCEEEEEE-CCEECccCCC
Confidence 46666653 45677888899999996 58999999996 8988865543
No 146
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.16 E-value=4e-06 Score=59.89 Aligned_cols=49 Identities=18% Similarity=0.500 Sum_probs=39.3
Q ss_pred CCCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 14 DDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 14 ~~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
..+.+|.++.. +..+.+.+|+.++|.|.| |.|.|+|+|.+++|..+...
T Consensus 337 ~~C~~P~i~~~-~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~ 385 (440)
T 3zyj_A 337 FTCYAPVIVEP-PADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHG 385 (440)
T ss_dssp SCCCCCCEEEC-CCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESS
T ss_pred ccCCCCccccc-ccceeeccCceEEEEeec-CCCCCceEEEeCCCceeecc
Confidence 34668888876 566678899999999999 56999999998788766543
No 147
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.16 E-value=3.1e-06 Score=55.95 Aligned_cols=47 Identities=13% Similarity=0.081 Sum_probs=37.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEc-ccCCCeEEEEeCCCeeecCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~-G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.|.+...++....+..|+.+.|.|.+. |+|.|+|+|++ ||..+....
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~i~~~~ 153 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGP 153 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEE-TTEEECSSS
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEE-CCEECeeCC
Confidence 555555544466777888999999999 99999999997 788776654
No 148
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.15 E-value=7.5e-07 Score=59.48 Aligned_cols=43 Identities=26% Similarity=0.510 Sum_probs=34.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDG 58 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG 58 (74)
..+|.+...+.+.....+|+.++|.|.|.|+|+| .|+|+++|+
T Consensus 209 ~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~ 252 (308)
T 4fom_A 209 QYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDG 252 (308)
T ss_dssp CEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSS
T ss_pred ecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCe
Confidence 4567777777666667788889999999999999 699997544
No 149
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.15 E-value=4.2e-06 Score=52.95 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=34.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+|.+..+|.. .+..|+.++|.|.|.| |.|.++|.+ ||..+
T Consensus 3 ~~~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 44 (196)
T 3p2t_A 3 LPKPTLWAEPGS--VISWGNSVTIWCQGTL-EAREYRLDK-EESPA 44 (196)
T ss_dssp BCCCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEE-TTSCS
T ss_pred CCCCEEEccCCC--cCCCCCcEEEEeeCCC-CCCEEEEEE-CCCCC
Confidence 457899999765 3567888999999999 889999997 56544
No 150
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.15 E-value=6.2e-06 Score=51.43 Aligned_cols=47 Identities=15% Similarity=0.344 Sum_probs=37.4
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCeeecC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGD 63 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~i~~ 63 (74)
....|.+..+|... .+.+|+.+.|.|.+.|.|.|. ++|++ ||..+..
T Consensus 4 ~~~~p~i~~~p~~~-~v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~~ 51 (175)
T 1fnl_A 4 DLPKAVVFLEPQWY-SVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLISS 51 (175)
T ss_dssp CCCCCEEEEESCCS-EEETTCCEEEEEECCCBTTBCCCEEEE-TTEEEES
T ss_pred CCCCCEEEEcCCce-eeeCCCcEEEEeeCCCCCCCcceEEEE-CCEEccC
Confidence 34678999997653 456788899999999999988 89997 7777654
No 151
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.14 E-value=8.3e-06 Score=61.63 Aligned_cols=50 Identities=20% Similarity=0.390 Sum_probs=41.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCCc
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPGL 67 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~~ 67 (74)
...|.|+..+ .+.....|+++.|.|.+.|.|+|+|+|.+ ||..|......
T Consensus 480 ~~~P~~~~~~-~~~~v~~G~~~~~~~~v~g~P~P~v~W~k-~~~el~~s~~~ 529 (573)
T 3uto_A 480 EAQPRFIVKP-YGTEVGEGQSANFYCRVIASSPPVVTWHK-DDRELKQSVKY 529 (573)
T ss_dssp GGSCEEEECC-CCEEECTTSCEEEEEEEECSSCCEEEEEE-TTEECCSSSSE
T ss_pred ccCCccccCC-CCcEEeCCCcEEEEEEEEccCCCeEEEEE-CCEEcccCCcE
Confidence 4578999885 55567889999999999999999999996 78887765543
No 152
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.14 E-value=1.4e-06 Score=57.35 Aligned_cols=34 Identities=29% Similarity=0.655 Sum_probs=28.4
Q ss_pred EecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 30 DFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 30 ~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+..|+.+.|.|.|.|+|.|+|+|.+ ||..+...
T Consensus 205 ~~~~g~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~ 238 (291)
T 2wim_A 205 TAERGEEMTFSCRASGSPEPAISWFR-NGKLIEEN 238 (291)
T ss_dssp CSSSCCEEEEECBCCCBSCCEEEEEE-TTEECCCT
T ss_pred eecCCCeEEEEEEeecCCCCeEEEEE-CCEECcCC
Confidence 34567789999999999999999996 78877543
No 153
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.13 E-value=8.4e-06 Score=51.82 Aligned_cols=46 Identities=17% Similarity=0.437 Sum_probs=33.7
Q ss_pred cceEEEcCCCcEEecCCCCe-EEEEEE-cccCCCeEEEEeCCCeeecCCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGA-QVECTA-RGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v-~L~C~A-~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
.|.+...+ ..+.+..|..+ .|.|.| .|.|.|+|+|.+ ||.++....
T Consensus 118 ~~~~~~~~-~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~-~~~~~~~~~ 165 (231)
T 2pet_A 118 ATEVSPNK-GTLSVMEDSAQEIATCNSRNGNPAPKITWYR-NGQRLEVPV 165 (231)
T ss_dssp CCEEEECC-SSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE-TTEECCCCS
T ss_pred CcEEecCC-cceeecCCCceEEEEEEeECcccCCEEEEEE-CCccCcccc
Confidence 35666553 33344566666 999999 999999999997 788776544
No 154
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.12 E-value=3.5e-06 Score=53.45 Aligned_cols=35 Identities=14% Similarity=0.426 Sum_probs=29.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
+++. |..+.+..|+++.|.|.+.|.|.|.|+|++.
T Consensus 4 v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3d9a_L 4 LTQS-PATLSVTPGNSVSLSCRASQSIGNNLHWYQQ 38 (213)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred EEeC-CccEEEeCCCcEEEEEECCCCCCCCEEEEEe
Confidence 3444 5666788899999999999999999999874
No 155
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.12 E-value=4.3e-06 Score=54.35 Aligned_cols=45 Identities=18% Similarity=0.406 Sum_probs=32.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
..+|.+...|+.... ..|..+.|.|.|.| .|+| +|+|.+ ||..+.
T Consensus 115 ~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 161 (218)
T 2rgs_A 115 VRAPQVYILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVEWTS-NGHTEE 161 (218)
T ss_dssp CBCCEEEEECCCGGG-TTSSEEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CCCCEEEEECCChHH-hcCCceEEEEEEEeeeCCCcEEEEEE-CCEecc
Confidence 456776666555432 24777999999999 6877 999997 777664
No 156
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.11 E-value=7.3e-06 Score=53.79 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=37.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
..|.|+.+| +.+.+..|+.+.|.|.+.|.|. .|+|.+.||..+....
T Consensus 3 ~~p~v~~~~-~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~ 49 (291)
T 2wim_A 3 ALLQVTISL-SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQ 49 (291)
T ss_dssp CCCEEEESC-SEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBT
T ss_pred CCceEEEec-cceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCC
Confidence 568888885 5556788989999999999985 9999987888765433
No 157
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.11 E-value=2.1e-06 Score=55.88 Aligned_cols=47 Identities=23% Similarity=0.336 Sum_probs=33.2
Q ss_pred CCccceEEEcCCCcEE-ecCCCCeEEEEEEccc---CC-CeEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRID-FSNTTGAQVECTARGS---PN-PEIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~-~~~g~~v~L~C~A~G~---P~-P~I~W~~~dG~~i~ 62 (74)
...+|.+...|++... +..|++++|.|.|.|. |. |+|+|++ ||..+.
T Consensus 6 ~~~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k-~~~~~~ 57 (218)
T 2rgs_A 6 LEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFV-NNVEVH 57 (218)
T ss_dssp ---CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEE-TTEEEC
T ss_pred CCCCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEE-CCcccc
Confidence 4567777666776543 5678899999999998 44 8999997 555553
No 158
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.09 E-value=1.9e-06 Score=51.21 Aligned_cols=35 Identities=14% Similarity=0.459 Sum_probs=26.9
Q ss_pred CCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
|+..+.. .|++++|.|.|.|+|. |+|.+ ||.+|..
T Consensus 6 p~~~v~~-~G~~v~L~C~~~g~P~--i~W~k-dg~~l~~ 40 (82)
T 3r08_E 6 IEYKVSI-SGTSVELTCPLDSDEN--LKWEK-NGQELPQ 40 (82)
T ss_dssp CCCEEEE-ETTEEEEECSSCCCSS--CEEEE-TTEECTT
T ss_pred CceeEEE-cCCeEEEEEECCCCCc--EEEEE-CCEECcC
Confidence 4455544 5778999999999994 99997 7887753
No 159
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.09 E-value=5.1e-06 Score=53.16 Aligned_cols=40 Identities=13% Similarity=0.295 Sum_probs=31.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
...+.+++.| ..+.+..|++++|.|.+.|.|.|.|+|++.
T Consensus 22 ~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 61 (237)
T 3sob_L 22 YADIQMTQSP-SSLSASVGDRVTITCRASQDVSTAVAWYQQ 61 (237)
T ss_dssp --CCCEEEEC-SEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CccceEEeCC-CeEEEeCCCcEEEEEecCCCCCceEEEEEE
Confidence 3455667764 555677898999999999999999999874
No 160
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.09 E-value=3.2e-06 Score=56.66 Aligned_cols=44 Identities=14% Similarity=0.228 Sum_probs=35.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~i 61 (74)
.+|.+...++....+..|+.+.|.|.|.|+|.|. |+|.+ ||..+
T Consensus 230 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~-~~~~~ 274 (331)
T 3u83_A 230 YEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTT-LNGSL 274 (331)
T ss_dssp EEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEE-TTBSC
T ss_pred cCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEE-CCCcc
Confidence 4677776666665677888999999999999999 99997 45444
No 161
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.09 E-value=5.2e-06 Score=52.63 Aligned_cols=37 Identities=14% Similarity=0.343 Sum_probs=30.7
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
|.+++. |..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 2 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3nl4_L 2 VVMTQT-PASVSEPVGGTVTIKCQASQSISSYLAWYQQ 38 (213)
T ss_dssp CCEEEE-CSEEEEETTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ccEEeC-CCeEEEcCCCCEEEEEEecCCCCceEEEEEE
Confidence 455666 4556678899999999999999999999874
No 162
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.09 E-value=4.9e-06 Score=55.00 Aligned_cols=42 Identities=17% Similarity=0.502 Sum_probs=33.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i~ 62 (74)
+|.|+..+. ..+..|..+.|.|.|.|.|.| +|+|++ ||..+.
T Consensus 222 ~p~~~~~~~--~~v~~G~~~~l~C~~~~~p~~~~v~W~~-~g~~~~ 264 (312)
T 2y23_A 222 GPHFVEYLS--WEVTGECNVLLKCKVANIKKETHIVWYK-DEREIS 264 (312)
T ss_dssp SSEEEEEEE--EEEETTTEEEEEEEEESCCSSCEEEEEE-TTEEEE
T ss_pred CCceeecce--EEEeCCCEEEEEEEEcCCCCCCEEEEee-CCEECC
Confidence 477775432 456788889999999999999 999997 788776
No 163
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.09 E-value=6.1e-06 Score=52.33 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=34.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+|.|..+|.. .+.+|+.++|.|.|.|.|. .++|.+ ||..+
T Consensus 3 ~~~P~i~~~p~~--~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~ 44 (196)
T 2d3v_A 3 LSKATLWAEPGS--VISRGNSVTIRCQGTLEAQ-EYRLVK-EGSPE 44 (196)
T ss_dssp CCBCEEEEESCS--EEETTCCEEEEEECCTTCC-EEEEEE-TTCSS
T ss_pred CCCCEEEeCCCC--cccCCCeEEEEEeCCCCCc-EEEEEE-CCCCC
Confidence 467999999764 4568889999999999876 999997 66554
No 164
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.08 E-value=9.8e-06 Score=53.14 Aligned_cols=45 Identities=22% Similarity=0.197 Sum_probs=35.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~~i~~ 63 (74)
.+|.+...|... .+..|+.+.|.|.|.| .|.|+|+|.+ ||..+..
T Consensus 185 ~~p~i~~~~~~~-~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~~~ 230 (289)
T 3ejj_X 185 EPPQIKLEPSKL-VRIRGEAAQIVCSATNAEVGFNVILKR-GDTKLEI 230 (289)
T ss_dssp CCCEEEEESSSE-ECCSSSCEEEEEEEEESSSCCEEEEEE-TTEECCC
T ss_pred CCCeEEecCCce-EEEeCCcEEEEEEeCCCCCceEEEEEE-CCEEeec
Confidence 577888875544 4567888999999999 8999999997 6766643
No 165
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.07 E-value=6.1e-06 Score=51.69 Aligned_cols=37 Identities=32% Similarity=0.693 Sum_probs=30.5
Q ss_pred CcEEecCCCCeEEEEEE-cccCCCeEEEEeCCCeeecCC
Q psy11558 27 NRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 27 ~~v~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~~~ 64 (74)
....+..|+.+.|.|.+ .|.|.|+|+|.+ ||..+...
T Consensus 119 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~l~~~ 156 (212)
T 2v9r_A 119 SDVMVAVGEPAVMECQPPRGHPEPTISWKK-DGSPLDDK 156 (212)
T ss_dssp CCEEEETTSCEEEECBCCCEESCCEEEEEE-TTEEECTT
T ss_pred CceEecCCCcEEEEEecCCCCCCCEEEEEE-CCccCCCC
Confidence 44556788889999999 999999999997 78777643
No 166
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.07 E-value=4e-06 Score=53.88 Aligned_cols=43 Identities=26% Similarity=0.497 Sum_probs=30.6
Q ss_pred ceEEEcCCCcEE-ecCCCCeEEEEEEcccCC--C--eEEEEeCCCeeec
Q psy11558 19 PIFIKEPPNRID-FSNTTGAQVECTARGSPN--P--EIIWIRSDGTAVG 62 (74)
Q Consensus 19 P~fv~~Pp~~v~-~~~g~~v~L~C~A~G~P~--P--~I~W~~~dG~~i~ 62 (74)
|.....||+... ...|+.+.|.|.|.|.|+ | +|+|++ ||.++.
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k-~~~~~~ 49 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVH 49 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEE-TTEEEC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEE-CCcccc
Confidence 444444565533 257889999999999863 4 999997 676654
No 167
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.06 E-value=3.4e-06 Score=58.20 Aligned_cols=44 Identities=16% Similarity=0.244 Sum_probs=36.3
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCe
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 59 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~ 59 (74)
.+.+|.|...|.. +.+..|+.+.|.|.|.|.|.|+|+|+++++.
T Consensus 155 ~c~~P~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~ 198 (347)
T 2ifg_A 155 SCGVPTLKVQVPN-ASVDVGDDVLLRCQVEGRGLEQAGWILTELE 198 (347)
T ss_dssp TCCCCEEEEECCS-SCCBTTCCEEEEEEEECSSCCCCCEEESCCC
T ss_pred cCCCCceeccCCc-eEEeCCCcEEEEEEEecCCCCEEEEEcCCce
Confidence 3568999988654 4577888999999999999999999986544
No 168
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.06 E-value=1.2e-06 Score=58.96 Aligned_cols=45 Identities=22% Similarity=0.524 Sum_probs=34.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC---CCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS---DGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~---dG~~i~ 62 (74)
+|.+...++....+..|..+.|.|.|.|+|.|+|+|++. ||..+.
T Consensus 221 ~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~ 268 (334)
T 1ry7_B 221 RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVG 268 (334)
T ss_dssp SCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBC
T ss_pred CCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCcccc
Confidence 455555445566677888899999999999999999985 566553
No 169
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.06 E-value=5.3e-06 Score=54.72 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=30.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
.+|.+...|+.. .+..|+.+.|.|.|.|+|.|+|+|.+
T Consensus 180 ~~p~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~v~W~~ 217 (289)
T 3mjg_X 180 SSINVSVNAVQT-VVRQGENITLMCIVIGNEVVNFEWTY 217 (289)
T ss_dssp CCCCCEEEESCS-EEETTSCEEEEEEEESCSSBEEEEEC
T ss_pred CCCCcEEeCCcc-eeEcCCCEEEEEEECCCCCcceEEEc
Confidence 456666665554 46678899999999999999999996
No 170
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.04 E-value=4e-06 Score=53.15 Aligned_cols=44 Identities=34% Similarity=0.714 Sum_probs=33.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEE-cccCCCeEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~~ 63 (74)
+|.+...| ....+..|+.+.|.|.+ .|.|.|+|+|.+ ||.++..
T Consensus 108 ~~~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~-~g~~~~~ 152 (217)
T 2vr9_A 108 RDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWIK-DGVPLDD 152 (217)
T ss_dssp CCSCSBCC-CCEEECTTSCEEECCBCCCEESCCEEEEEE-TTEEECC
T ss_pred CCCcEECC-CccEEcCCCeEEEEEECCCCCCCCeEEEEE-CCcCCCc
Confidence 34444443 44557788889999999 999999999997 7887763
No 171
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.04 E-value=2e-06 Score=55.92 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=31.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~~ 63 (74)
.|.+...++....+..|..++|.|.|.|.|+| +|+|.+ ||..+..
T Consensus 124 ~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 170 (246)
T 4dzb_B 124 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 170 (246)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEE-CCEECCC
Confidence 44444333443334457789999999998866 999997 8888754
No 172
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.04 E-value=1.1e-05 Score=50.84 Aligned_cols=39 Identities=8% Similarity=0.145 Sum_probs=30.4
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCC-----CeEEEEeCCCee
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPN-----PEIIWIRSDGTA 60 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~-----P~I~W~~~dG~~ 60 (74)
+..|++.+.+..|+++.|.|.+.|.|. |.|+|++.++..
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~ 48 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDT 48 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--C
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcc
Confidence 455677777889999999999999998 999999855543
No 173
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.03 E-value=5.4e-06 Score=54.83 Aligned_cols=42 Identities=12% Similarity=0.256 Sum_probs=33.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCe
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGT 59 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~ 59 (74)
.+|.|...|... .+..|+.+.|.|.|.|.|.|. |+|+++++.
T Consensus 187 ~~P~i~~~~~~~-~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 187 AIPVVSVPETSH-LLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp SCCEEECSCSBC-CCCTTCCEEEEEEEEESSTTCEEEEEEESSS
T ss_pred CCCccccCCCcc-eEecCCcEEEEEEEecCCcceeEEEecCCCC
Confidence 678887776554 577888999999999999997 999985443
No 174
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.03 E-value=8.3e-06 Score=51.66 Aligned_cols=37 Identities=14% Similarity=0.277 Sum_probs=30.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
|.+++. |..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 2 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (213)
T 3r06_A 2 IQMTQS-PSSLPASLGDRVTINCQASQDISNYLNWYQQ 38 (213)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CeeEeC-CCEEEecCCCcEEEEEEeCCCcCceEEEEEE
Confidence 455665 4566788899999999999999999999873
No 175
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.03 E-value=1.4e-05 Score=50.47 Aligned_cols=41 Identities=7% Similarity=-0.024 Sum_probs=33.5
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCe
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGT 59 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~ 59 (74)
...+|.+...|.. .+.+|+.++|.|.|.| |.|.++|.+ ||.
T Consensus 5 ~~~~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~W~k-~g~ 45 (184)
T 2gi7_A 5 PLPKPSLQALPSS--LVPLEKPVTLRCQGPP-GVDLYRLEK-LSS 45 (184)
T ss_dssp CBCCCEEEEESCS--EEETTCCEEEEEECST-TCSEEEEEE-TTT
T ss_pred CCCCCeEEeCCCc--cccCCCcEEEEEeCCC-CCCEEEEEE-CCc
Confidence 3568899988764 4668889999999999 899999997 454
No 176
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.03 E-value=7.2e-06 Score=48.50 Aligned_cols=38 Identities=13% Similarity=0.283 Sum_probs=31.0
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+.+++. |..+...+|++++|.|.+.|.|.|.|.|++.+
T Consensus 4 ~~v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 41 (109)
T 2q20_A 4 IQMTQS-PSSLSASVGDRVTITCQASQDISNYLNWYQQK 41 (109)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred ccEEee-CCEEEecCCCcEEEEEeeccCCCCcEEEEEEC
Confidence 345565 45567888999999999999999999999854
No 177
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.02 E-value=7.6e-06 Score=60.03 Aligned_cols=42 Identities=17% Similarity=0.415 Sum_probs=33.1
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+...| ....+..|+.+.|.|.|.|+|.|+|+|++ ||.++..
T Consensus 561 ~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~-~g~~i~~ 602 (642)
T 1e07_A 561 TPIISP-PDSSYLSGANLNLSCHSASNPSPQYSWRI-NGIPQQH 602 (642)
T ss_pred cceecC-CceeEEcCCcEEEEEEeccCCCCeEEEEE-CCEECcc
Confidence 344443 44556778889999999999999999996 7887754
No 178
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.02 E-value=1.1e-05 Score=51.89 Aligned_cols=43 Identities=19% Similarity=0.230 Sum_probs=33.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCCCee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSDGTA 60 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~dG~~ 60 (74)
..|.+...|+..+.+..|+.++|.|.|.|.| .++|+|.+ +|..
T Consensus 103 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~-~g~~ 147 (213)
T 2x1w_L 103 RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSK 147 (213)
T ss_dssp CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEEC-SCSS
T ss_pred cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEe-cCCc
Confidence 3566777777776778899999999999966 45899986 5544
No 179
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.02 E-value=5.2e-06 Score=54.36 Aligned_cols=45 Identities=29% Similarity=0.536 Sum_probs=31.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~~ 63 (74)
+|.+...++....+..|..+.|.|.|.|. |+| +|+|++ ||.++..
T Consensus 120 ~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~~~~ 166 (238)
T 1bec_A 120 PPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV-NGKEVHS 166 (238)
T ss_dssp CCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEE-TTEEECT
T ss_pred CCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEE-CCEECCC
Confidence 45554443443334467789999999997 766 999997 8887753
No 180
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.02 E-value=2.9e-05 Score=58.47 Aligned_cols=49 Identities=22% Similarity=0.424 Sum_probs=38.4
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCCCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVPG 66 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~~ 66 (74)
..+|.+...+.. ..+..|+.+.|.|.|.|+|.|+|+|.+ ||..+.....
T Consensus 427 ~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~v~W~~-~g~~l~~~~~ 475 (816)
T 3dmk_A 427 FDPPVIRQAFQE-ETMEPGPSVFLKCVAGGNPTPEISWEL-DGKKIANNDR 475 (816)
T ss_dssp SCCCEEEEECCC-EEECSSSCEEEEEEEECSSCCEEEEEE-TTEECCSCTT
T ss_pred cCCCceEecCcc-eEEcCCCCEEEEEEEecCCCCEEEEEE-CCEECCCCCC
Confidence 457788777544 456788889999999999999999997 7887755443
No 181
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.02 E-value=7e-07 Score=66.15 Aligned_cols=47 Identities=28% Similarity=0.549 Sum_probs=0.0
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
..+|.|...+.+ ..+..|+.+.|.|.|.|+|.|+|+|++ ||.++...
T Consensus 664 ~~~P~~~~~~~~-~~v~~g~~~~l~C~~~g~P~p~v~W~k-~g~~l~~~ 710 (772)
T 3v2a_R 664 RVAPTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVED 710 (772)
T ss_dssp -------------------------------------------------
T ss_pred cCCCEeecCCCc-eEEeCCCCEEEEEEeCccCCCeEEEEE-CCeECcCC
Confidence 457888877544 456778889999999999999999996 77776544
No 182
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.02 E-value=5.9e-06 Score=51.24 Aligned_cols=34 Identities=24% Similarity=0.491 Sum_probs=26.6
Q ss_pred CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 27 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 27 ~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
.......+..+.+.|.|.|.|+|+|+|++ ||..+
T Consensus 126 ~~~~~~~~~~~~~~c~~~g~p~p~i~W~~-~~~~~ 159 (218)
T 4frw_A 126 PALEEGQGLTLAASCTAEGSPAPSVTWDT-EVKGT 159 (218)
T ss_dssp SCEETTCCSEEEEEEEEEEBSCCEEEEEE-SSCCE
T ss_pred eeeeeeeccccceeeeccCCcCceEEEEE-CCccc
Confidence 34445567779999999999999999997 45444
No 183
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.02 E-value=8.7e-06 Score=51.73 Aligned_cols=43 Identities=21% Similarity=0.557 Sum_probs=30.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEE-cccCCCeEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~ 62 (74)
.|.+...|... +..|..+.|.|.| .|.|.|+|+|.+++|..+.
T Consensus 111 ~p~i~~~~~~~--v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~ 154 (222)
T 4i0k_A 111 KPSMTLEPNKD--LRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLT 154 (222)
T ss_dssp CCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred CCcEEeCCCce--ecCCceEEEEEecccccCCCeEEEEcCCCccCC
Confidence 46666665433 4567789999999 9999999999986777654
No 184
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.00 E-value=7.2e-06 Score=55.35 Aligned_cols=37 Identities=24% Similarity=0.498 Sum_probs=30.6
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~d 57 (74)
.|++ +|..+.+..|+.+.|.|.+.|. |.|+|+|++++
T Consensus 5 ~v~~-~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~ 42 (327)
T 2wng_A 5 QVIQ-PDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGA 42 (327)
T ss_dssp CEEC-CCSEEEEETTSCEEECCEESCCCSCCCEEEEESC
T ss_pred EEEc-CCCceEEecCCcEEEEEEccCcCCCceEEEEECC
Confidence 3444 4677778899999999999998 99999999843
No 185
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.00 E-value=2.7e-06 Score=54.79 Aligned_cols=41 Identities=10% Similarity=0.310 Sum_probs=25.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
...+.+++.| ..+.+..|++++|.|.+.|.|.|.|+|++.+
T Consensus 21 ~~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~ 61 (233)
T 3bqu_C 21 GAETTVTQSP-ASLSMSIGEKVTIRCITSTDIDDDMNWYQQK 61 (233)
T ss_dssp --CCCEEEEC-SBC-------CCEEEEEEEEESSCEEEEEEC
T ss_pred ccceeEEEcC-CeEEEecCCCEEEEEecCCcCCCeEEEEEEC
Confidence 3455666664 4445678889999999999999999998754
No 186
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.99 E-value=1.1e-05 Score=51.20 Aligned_cols=31 Identities=19% Similarity=0.434 Sum_probs=27.4
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
|..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 37 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQ 37 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEE
Confidence 4566788899999999999999999999874
No 187
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.99 E-value=1.1e-06 Score=57.87 Aligned_cols=33 Identities=21% Similarity=0.493 Sum_probs=27.6
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
+....+.+|+.+.|.|.|.|+|.|+|+|+++++
T Consensus 192 p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 192 PGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp CSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred CCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 345566788889999999999999999998544
No 188
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.99 E-value=5.9e-06 Score=52.37 Aligned_cols=45 Identities=24% Similarity=0.374 Sum_probs=32.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccC-C-CeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-N-PEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~-P~I~W~~~dG~~i~~ 63 (74)
.+|.+...|++.. ...|..+.|.|.|.|.| + ++|+|.+ ||.++..
T Consensus 113 ~~P~i~~~~~~~~-~~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 159 (213)
T 3mj8_L 113 AAPSVTLFPPSSE-ELKTNQATLVCMINGFYPADVAVTWEA-DGTPITQ 159 (213)
T ss_dssp BCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred CCCeEEccCCCcc-cccCCcEEEEEEeeceeCCCeEEEEEc-CCcccCC
Confidence 5666666655543 23677899999999974 4 3999997 8888754
No 189
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.99 E-value=1.2e-05 Score=50.87 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=33.8
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+|.|..+|.. .+.+|+.++|.|.|.|.|. .++|.+ ||..+
T Consensus 3 ~~~P~i~~~p~~--~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~ 44 (198)
T 1ugn_A 3 LPKPTLWAEPGS--VITQGSPVTLRCQGGQETQ-EYRLYR-EKKTA 44 (198)
T ss_dssp CCCCEEEEESCS--EEETTCCEEEEEECCTTCC-CEEEEE-SSSCC
T ss_pred CCCCeEeccCCC--cccCCCcEEEEEEecCCCc-EEEEEE-CCccc
Confidence 467999988754 4668889999999999886 799997 66655
No 190
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.99 E-value=7.1e-06 Score=52.04 Aligned_cols=45 Identities=18% Similarity=0.304 Sum_probs=33.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~dG~~i~~ 63 (74)
.+|.+...|+.... ..|..+.|.|.|.|. |.|+|+|.+ ||.++..
T Consensus 110 ~~P~v~~~~~~~~~-~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 156 (211)
T 3tv3_L 110 AAPSVTLFPPSSEE-LQANKATLVCLISDFYPGAVTVAWKA-DSSPVKA 156 (211)
T ss_dssp BCCEEEEECCCHHH-HHTTCEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred cCCeeEecCCchhh-hcCCCeEEEEEeeeecCCCeEEEEEE-CCeecCC
Confidence 56777776655432 257789999999996 468999996 8887753
No 191
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.98 E-value=5.3e-06 Score=51.67 Aligned_cols=46 Identities=13% Similarity=0.296 Sum_probs=32.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i~~ 63 (74)
..+|.+...|... .+..|+.+.|.|.+.|.|.| .|+|++ ||..+..
T Consensus 2 ~~~P~i~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~~ 48 (176)
T 1f2q_A 2 PQKPKVSLNPPWN-RIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSEE 48 (176)
T ss_dssp --CCCCEEESSCS-EEETTCCEEEECCTTCC----CCEEEE-TTEECSC
T ss_pred CCCCEEEcCCCCc-ceecCCcEEEEEeCCCCCCcceEEEEE-CCeECCC
Confidence 3578888886663 46678889999999999997 699996 7776643
No 192
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=97.98 E-value=9.1e-06 Score=48.00 Aligned_cols=35 Identities=14% Similarity=0.403 Sum_probs=28.9
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
++. |..+...+|++++|.|.++|.|.+.|.|++.+
T Consensus 5 ~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (108)
T 1qfw_M 5 TQS-PKSMSMSVGERVTLSCKASETVDSFVSWYQQK 39 (108)
T ss_dssp EEE-CSCEECCTTCCEEEEEEESSCCCSCEEEEEEC
T ss_pred EEe-CCeEEEcCCCCEEEEeeeCCCCCcEEEEEEEC
Confidence 444 55566788999999999999999999999753
No 193
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.98 E-value=1.2e-05 Score=52.38 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=30.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
..+++. |..+.+.+|++++|.|.+.|.|.|.|.|++.
T Consensus 5 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~ 41 (250)
T 3esu_F 5 IVLIQS-TSSLSASLGDRVTISCRASQDIRNYLNWYQQ 41 (250)
T ss_dssp CCEECS-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred eeEEec-CCEEEeeCCCcEEEEEEecccCCceEEEEEE
Confidence 344444 5666788999999999999999999999984
No 194
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.97 E-value=2e-06 Score=60.35 Aligned_cols=42 Identities=21% Similarity=0.474 Sum_probs=33.1
Q ss_pred ccceEEEcC-CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 17 LGPIFIKEP-PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 17 ~~P~fv~~P-p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
.+|.+...+ |..+.+.+|..+.|.|.|.|+|.|+|+|++++.
T Consensus 367 ~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~ 409 (450)
T 1z7z_I 367 YGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 409 (450)
T ss_dssp EEEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred cCCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCc
Confidence 456666653 356667788899999999999999999997443
No 195
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.97 E-value=7.1e-06 Score=52.15 Aligned_cols=44 Identities=32% Similarity=0.497 Sum_probs=31.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
+|.+...++.... ..|+.+.|.|.|.| .|+| +|+|++ ||.++..
T Consensus 111 ~P~v~~~~~~~~~-~~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~~~~ 156 (210)
T 1lk3_L 111 APTVSIFPPSTEQ-LATGGASVVCLMNNFYPRDISVKWKI-DGTERRD 156 (210)
T ss_dssp CCEEEEECCCHHH-HTTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCT
T ss_pred CCeEEEECCchhh-ccCCcEEEEEEEEeEeCCceEEEEEe-CCccCCC
Confidence 5666665554332 35667999999998 4554 899997 7887653
No 196
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=97.97 E-value=6.2e-06 Score=57.87 Aligned_cols=36 Identities=8% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
+..+.+..|+.++|.|.|.| |.|+|+|.++++..+.
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~ 288 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVL 288 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCC
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEe
Confidence 45667788999999999999 9999999986665443
No 197
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=97.97 E-value=1.6e-05 Score=49.99 Aligned_cols=30 Identities=20% Similarity=0.689 Sum_probs=24.9
Q ss_pred CCCCeEEEEEEc-ccCCCeEEEEeCCCeeecC
Q psy11558 33 NTTGAQVECTAR-GSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 33 ~g~~v~L~C~A~-G~P~P~I~W~~~dG~~i~~ 63 (74)
.|..+.|.|.|. |.|.|+|+|++ ||..+..
T Consensus 120 ~g~~~~l~C~~~~g~P~p~i~W~k-~g~~l~~ 150 (201)
T 1dr9_A 120 TSNIRRIICSTSGGFPEPHLSWLE-NGEELNA 150 (201)
T ss_dssp STTEEEEEEEEEEESSCEEEEEEE-SSCEECC
T ss_pred CCCeEEEEEecCCccCCCEEEEEE-CCEECcc
Confidence 455689999995 99999999997 6877653
No 198
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=97.97 E-value=9.2e-06 Score=47.89 Aligned_cols=36 Identities=8% Similarity=0.410 Sum_probs=29.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+++. |..+...+|++++|.|.+.|.|.+.|.|++.+
T Consensus 4 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (107)
T 1i8k_A 4 LTQS-PASLSVATGEKVTIRCMTSTDIDDDMNWYQQK 39 (107)
T ss_dssp EEEE-CSEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eEeC-CCeEEecCCCCEEEEEEECCCCCCcEEEEEEC
Confidence 3444 55667888999999999999999999999853
No 199
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.97 E-value=5.3e-05 Score=47.46 Aligned_cols=42 Identities=10% Similarity=0.268 Sum_probs=31.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.|.+...+.. ...|..+.|.|.|.|.| |+|+|.+ ||..+...
T Consensus 112 ~p~i~~~~~~---~~~g~~v~l~C~~~~~p-p~i~W~~-~g~~l~~~ 153 (208)
T 3r4d_A 112 QPFLQVTNTT---VKELDSVTLTCLSNDIG-ANIQWLF-NSQSLQLT 153 (208)
T ss_dssp CCEEEESCSS---CCTTCCEEEEEECSCTT-CEEEEEE-TTEECCCC
T ss_pred CCEEecCCce---EeeCCCEEEEEECCCCC-CceEEEE-CCEeCCCC
Confidence 3555555333 45777899999999977 8999997 78777543
No 200
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=97.96 E-value=9.5e-06 Score=52.55 Aligned_cols=47 Identities=21% Similarity=0.412 Sum_probs=31.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEccc-CC-CeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i~~ 63 (74)
..+|.+...++....+..|..+.|.|.|.|. |+ ++|+|.+ ||..+..
T Consensus 104 ~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 152 (214)
T 1ow0_A 104 TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELPR 152 (214)
T ss_dssp CCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEE-TTEECCG
T ss_pred CCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEE-CCEECCC
Confidence 3566655444443223466679999999996 54 4999997 7877643
No 201
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.96 E-value=1.1e-05 Score=51.20 Aligned_cols=31 Identities=10% Similarity=0.213 Sum_probs=25.9
Q ss_pred CCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 34 TTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 34 g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
++.+.|.|.|.|.|.|+|+|++ ||.++....
T Consensus 110 ~~~v~L~C~~~g~p~p~i~W~~-~g~~l~~~~ 140 (176)
T 1hng_A 110 CSNATLTCEVLEGTDVELKLYQ-GKEHLRSLR 140 (176)
T ss_dssp TTTTEEEEECSSCSSCEEEEEE-TTEEEEEES
T ss_pred CCcEEEEEEecCCCCcEEEEEE-CCEECCCCC
Confidence 4459999999999999999997 888875443
No 202
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=97.95 E-value=7.2e-06 Score=51.98 Aligned_cols=40 Identities=15% Similarity=0.263 Sum_probs=22.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
+|.+...| .. .+.+|+.++|.|.|.|.| |+++|.+ ||..+
T Consensus 100 ~p~i~~~~-~~-~v~~G~~v~L~C~~~~~p-~~~~W~k-~g~~~ 139 (196)
T 2d3v_A 100 KPTLSALP-SP-VVTSGENVTLQCGSRLRF-DRFILTE-EGDHK 139 (196)
T ss_dssp CCEEEC-------------CEEEEEESSCC-SEEEEEE-C---C
T ss_pred CCeEEccC-Cc-cccCCCcEEEEEEcCCCC-CEEEEEc-cCCcc
Confidence 56665553 32 356788899999999999 9999997 66554
No 203
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.95 E-value=5.7e-06 Score=52.89 Aligned_cols=41 Identities=17% Similarity=0.430 Sum_probs=29.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTA 60 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~ 60 (74)
.|.+...++.. ....|..+.|.|.|.| .|.| +|+|.+ ||..
T Consensus 124 ~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~ 166 (219)
T 1c1e_H 124 PPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 166 (219)
T ss_dssp CCEEEEECCCS-SSCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred CCeEEEecCcc-ccccCCeEEEEEEcccccCCCeEEEEEe-CCcc
Confidence 35555444333 2346778999999999 9999 999986 6665
No 204
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.95 E-value=7.9e-06 Score=52.53 Aligned_cols=37 Identities=11% Similarity=0.403 Sum_probs=32.0
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcc---cCCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARG---SPNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G---~P~P~I~W~~~d 57 (74)
.+..|+..+.+..|+.+.|.|.+.| .|.|.|+|++++
T Consensus 4 ~v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~ 43 (250)
T 2fbo_J 4 TVRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGA 43 (250)
T ss_dssp EEECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEE
T ss_pred EEEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCC
Confidence 4566777888889999999999999 999999999854
No 205
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.94 E-value=1.9e-05 Score=51.31 Aligned_cols=38 Identities=18% Similarity=0.434 Sum_probs=30.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.|.+.+. +..+.+.+|++++|.|.+.|.|.|.|+|++.
T Consensus 135 ~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 135 ETTLTQS-PATLSLSPGERATLSCRASQSVRSNLAWYQQ 172 (247)
T ss_dssp CCCEEEE-CSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred ceEEEcc-CCEEEecCCCcEEEEEEeCCCccceEEEEEE
Confidence 4455555 4555677888999999999999999999973
No 206
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.94 E-value=1.4e-05 Score=52.50 Aligned_cols=41 Identities=12% Similarity=0.260 Sum_probs=31.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccC-----CCeEEEEeCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 57 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 57 (74)
...+.+++. |..+.+..|++++|.|.+.|.| .|.|+|++.+
T Consensus 32 ~~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 77 (252)
T 3bkj_L 32 SSDVLMTQT-PLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQR 77 (252)
T ss_dssp --CCCEEEE-CSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred ccccEEEeC-CceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEEC
Confidence 345566666 4566678899999999999999 7999999854
No 207
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.94 E-value=1.1e-05 Score=52.07 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=29.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
.+++.| ..+.+..|+.++|.|.+.|.|.|.|+|++.+
T Consensus 129 ~v~~~p-~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 129 QVRQSP-QSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp CCEEEC-SEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred eEEccC-ceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 555554 4455778889999999999999999999854
No 208
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.93 E-value=1e-05 Score=51.28 Aligned_cols=45 Identities=27% Similarity=0.356 Sum_probs=31.5
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~~ 63 (74)
.+|.+...++.... ..|+.++|.|.|.|.|+| +|+|.+ ||.++..
T Consensus 114 ~~P~v~~~~~~~~~-~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 160 (212)
T 1q0x_L 114 SSPTVTLFPPSSEE-LSTAKATLVCTITDFYPGVVTVDWKV-DGTPVTA 160 (212)
T ss_dssp BCCEEEEECCCHHH-HTTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECT
T ss_pred CCCeeEEeCCCHHH-ccCCcEEEEEEEEEEeCCCeEEEEEE-CCEeCCC
Confidence 45666665554432 346679999999996544 899997 7887753
No 209
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=97.93 E-value=5.7e-06 Score=59.29 Aligned_cols=47 Identities=19% Similarity=0.552 Sum_probs=38.3
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+.+|.++..| ..+.+.+|+.++|.|.|. |.|+|+|.+++|..+...
T Consensus 349 ~C~~P~i~~~~-~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~ 395 (452)
T 3zyi_A 349 QCSAPFIMDAP-RDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHA 395 (452)
T ss_dssp CCCCCCCSBCC-CCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSS
T ss_pred cccCccccccc-ccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccC
Confidence 46678888764 556788999999999999 999999998888876543
No 210
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=97.93 E-value=7.8e-06 Score=51.78 Aligned_cols=45 Identities=24% Similarity=0.463 Sum_probs=31.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~~ 64 (74)
+|.+...++..... .|..+.|.|.|.| .|.| +|+|++ ||.++...
T Consensus 112 ~p~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~ 158 (213)
T 3d9a_L 112 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQNG 158 (213)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-TTEEECTT
T ss_pred CceeEeECCChhhc-CCCcEEEEEEEeeecCCceEEEEEc-CCCcCcce
Confidence 56666554443323 4567999999998 6776 899997 78877543
No 211
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.93 E-value=1.1e-05 Score=59.81 Aligned_cols=47 Identities=4% Similarity=-0.012 Sum_probs=34.3
Q ss_pred ccceEEEcCC-CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 17 LGPIFIKEPP-NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 17 ~~P~fv~~Pp-~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+|.+...|. ..+.+..|+.+.|.|.|.|+|.|+|+|++ ||.++...
T Consensus 323 ~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~g~~l~~~ 370 (527)
T 3qs9_E 323 EKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF-SRKSFPCE 370 (527)
T ss_dssp --CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEE-TTEEEECB
T ss_pred ccCccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECcCC
Confidence 3455554443 23556678889999999999999999996 78887543
No 212
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=97.93 E-value=1.5e-05 Score=49.07 Aligned_cols=36 Identities=6% Similarity=0.148 Sum_probs=29.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
|... +..+.+..|++++|.|.+.|.|.|.|.|++.+
T Consensus 41 ~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~ 76 (145)
T 1z9m_A 41 SQPW-TSDETVVAGGTVVLKCQVKDHEDSSLQWSNPA 76 (145)
T ss_dssp TCCB-CCCEEEETTSCEEEEEECSCCTTCCEEEECTT
T ss_pred eecC-CceEEEEcCCCEEEEEEEcCCCCcEEEEECCC
Confidence 3344 55667788999999999999999999999643
No 213
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=97.93 E-value=1.2e-05 Score=50.96 Aligned_cols=46 Identities=22% Similarity=0.288 Sum_probs=32.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~~ 63 (74)
..+|.+...|+... ...|..+.|.|.|.|.|+| +|+|.+ ||.++..
T Consensus 110 ~~~p~v~~~~~~~~-~~~~~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 157 (213)
T 3r06_A 110 DAKPTVSIFPPSSE-QLGTGSATLVCFVNNFYPKDINVKWKV-DGSEKRD 157 (213)
T ss_dssp CBCCEEEEECCCHH-HHTTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCCceeeeeCCCce-ecCCCCcEEEEEEeeecCCceEEEEEE-CCcccCC
Confidence 45666766655543 2345569999999998754 999997 7887753
No 214
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=97.92 E-value=7.4e-06 Score=52.27 Aligned_cols=45 Identities=20% Similarity=0.383 Sum_probs=30.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
.+|.+...++..... .|..++|.|.|.| .|.| +|+|++ ||.++..
T Consensus 113 ~~P~v~~~~~~~~~~-~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~~~~ 159 (216)
T 2xzc_L 113 AAPSVFIFPPSDEQL-KSGTASVVCLLNNFYPREAKVQWKV-DNALQSG 159 (216)
T ss_dssp BCCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCS
T ss_pred CCCceEEeCCChhhc-cCCcEEEEEEEEeEcCCceEEEEEE-CCeecCC
Confidence 456666554443223 3557999999999 5665 999997 7877643
No 215
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=97.92 E-value=1.4e-05 Score=48.48 Aligned_cols=36 Identities=14% Similarity=0.324 Sum_probs=29.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+++. |..+...+|++++|.|.++|.|.+.|.|++.+
T Consensus 4 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 39 (120)
T 1mqk_L 4 LTQT-PVSLSASVGETVTITCRASENIYSYLAWYQQK 39 (120)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eEec-CCeEEEcCCCcEEEEEEeCCCCCceEEEEEEC
Confidence 3444 55667889999999999999999999999853
No 216
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.92 E-value=1.3e-05 Score=51.54 Aligned_cols=45 Identities=16% Similarity=0.375 Sum_probs=31.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~ 62 (74)
..+|.+...|+.... ..|..+.|.|.|.|. |+| +|+|++ ||.++.
T Consensus 107 ~~~P~v~~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 153 (207)
T 2vol_A 107 PKAPQVYTLPPPKEQ-MAKDKVSLTCMITDFFPEDITVEWES-NGQPAE 153 (207)
T ss_dssp CBCCEEEEECCCTGG-GSSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CcCCeEEEeCCCHHH-hcCCceEEEEEEeeEECCCCEEEEEE-CCEecc
Confidence 456766665554432 246779999999995 553 999997 787764
No 217
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=97.92 E-value=8.9e-06 Score=51.55 Aligned_cols=45 Identities=22% Similarity=0.496 Sum_probs=31.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
.+|.+...++..... .+..++|.|.|.| .|.| +|+|.+ ||.++..
T Consensus 120 ~~P~~~~~~~~~~~~-~~~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~~ 166 (218)
T 3s96_B 120 STPTLTVFPPSSEEL-KENKATLVCLISNFSPSGVTVAWKA-NGTPITQ 166 (218)
T ss_dssp BCCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-TTEEC--
T ss_pred CCceEEeeCCCcccc-cCCcEEEEEEECcccCCCeEEEEEE-CCEECcC
Confidence 556666655554333 3467999999999 6888 999997 8887754
No 218
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=97.92 E-value=2.9e-05 Score=50.42 Aligned_cols=32 Identities=16% Similarity=0.452 Sum_probs=26.6
Q ss_pred cCCCCeEEEEEEccc-CCC-eEEEEeCCCeeecC
Q psy11558 32 SNTTGAQVECTARGS-PNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~~ 63 (74)
..|..+.|.|.|.|. |.| +|+|.+.||..+..
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~ 172 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISS 172 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSC
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccCCCccce
Confidence 466779999999998 888 99999868877643
No 219
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=97.91 E-value=8.4e-06 Score=53.52 Aligned_cols=42 Identities=7% Similarity=-0.005 Sum_probs=34.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+|.|..+|.. .+..|++++|.|.|.| |.|.++|++ ||..+
T Consensus 7 ~~~P~i~~~p~~--~v~~G~~vtL~C~~~~-~~~~~~W~k-~g~~~ 48 (218)
T 1uct_A 7 FPMPFISAKSSP--VIPLDGSVKIQCQAIR-EAYLTQLMI-IKNST 48 (218)
T ss_dssp SCCCCEEESSCS--EEETTCCEEEEECCCT-TCSEEEEEE-EETTE
T ss_pred CCCCEEEecCCC--ccCCCCCEEEEEEcCC-CCCEEEEEE-CCCcc
Confidence 568999999763 3567889999999999 899999997 55544
No 220
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=97.91 E-value=1.6e-05 Score=50.99 Aligned_cols=45 Identities=20% Similarity=0.497 Sum_probs=30.0
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEccc-CC-CeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i~ 62 (74)
..+|.+...++....+.++ .+.|.|.|.|. |+ ++|+|.+ ||.++.
T Consensus 107 ~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 153 (207)
T 1l6x_A 107 PREPQVYTLPPSRDELTKN-QVSLTCLVKGFYPSDIAVEWES-NGQPEN 153 (207)
T ss_dssp CBCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred CcCCEEEEECCChHHhcCC-cEEEEEEEeCeECCCeEEEEEE-CCeecc
Confidence 3456655554443223344 59999999995 54 3999997 787764
No 221
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=97.91 E-value=1.5e-05 Score=55.87 Aligned_cols=44 Identities=11% Similarity=0.196 Sum_probs=33.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC---eEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP---EIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P---~I~W~~~dG~~i~ 62 (74)
+|.+....+....+.+|+.+.|.|.+.|.|+| +|+|++ ||.++.
T Consensus 85 ~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k-~g~~l~ 131 (450)
T 1z7z_I 85 TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR-GEKELK 131 (450)
T ss_dssp CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEE-TTEEEE
T ss_pred CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEee-CCEEee
Confidence 55555333444456788899999999999999 999997 787765
No 222
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=97.90 E-value=2.2e-05 Score=48.43 Aligned_cols=44 Identities=30% Similarity=0.517 Sum_probs=31.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC-Ceeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD-GTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d-G~~i~ 62 (74)
.+|.+...+ .. ....|..+.|.|.|.|+|.|+|+|.+++ |..+.
T Consensus 94 ~~p~~~~~~-~~-~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~ 138 (192)
T 2va4_A 94 VQPHIIQLK-NE-TTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFT 138 (192)
T ss_dssp EEEEEEEEC-CE-EECTTSEEEEEEEEEEESCCEEEEEETTTTEEEC
T ss_pred ccCcccccC-cc-eEEeCCeEEEEEEecCCCCCcEEEEeCCCCceee
Confidence 455555543 33 3456778999999999999999999852 55554
No 223
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.90 E-value=4e-06 Score=53.25 Aligned_cols=45 Identities=22% Similarity=0.423 Sum_probs=31.5
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CC-CeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i~~ 63 (74)
.+|.+...++... ...|..+.|.|.|.|. |+ |+|+|.+ ||.++..
T Consensus 112 ~~p~v~~~~~~~~-~~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~ 158 (212)
T 1nfd_E 112 SSPKVTVFPPSPE-ELRTNKATLVCLVNDFYPGSATVTWKA-NGATIND 158 (212)
T ss_dssp BCCEEECCCCCHH-HHHTTEECCCEEEEEEBSSCCEEEEEE-TTEEECS
T ss_pred CCCEEEeeCCchH-hccCCceEEEEEEEeeECCccEEEEEE-CCeEcCC
Confidence 4455555444432 2346679999999998 55 8999997 7887753
No 224
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=97.90 E-value=1.4e-05 Score=59.29 Aligned_cols=38 Identities=11% Similarity=0.164 Sum_probs=31.2
Q ss_pred CCCcEEecCCCCeEEEEEEc-ccCCCeEEEEeCCCeeecC
Q psy11558 25 PPNRIDFSNTTGAQVECTAR-GSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~-G~P~P~I~W~~~dG~~i~~ 63 (74)
|+..+.+..|+.+.|.|.|. |+|.|+|+|.+ ||..+..
T Consensus 233 ~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k-~g~~l~~ 271 (527)
T 3qs9_E 233 TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWEL-ENKALEE 271 (527)
T ss_dssp SCCEEEECTTSCEEEEEEEEESSSCCCEEEEC-SSSCCCG
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCeEEEEEE-CCEECCC
Confidence 55667788899999999997 99999999996 6665543
No 225
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.90 E-value=6.4e-06 Score=53.47 Aligned_cols=46 Identities=28% Similarity=0.515 Sum_probs=31.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
..|.+...++....+..|..+.|.|.|.| .|.| +|+|.+ ||.++..
T Consensus 120 ~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~l~~ 167 (240)
T 3q5y_A 120 TPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWV-NGKEVHS 167 (240)
T ss_dssp BCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEE-CCEECcC
Confidence 44544444344433445677999999999 7777 899996 8888753
No 226
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=97.90 E-value=1.2e-05 Score=54.22 Aligned_cols=43 Identities=14% Similarity=0.336 Sum_probs=31.8
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
..+|.+...+.. +.+|..+.|.|.|.|.|+| +|+|++ ||.++.
T Consensus 220 ~~~P~i~~~~~~---~~~G~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~ 264 (327)
T 2wng_A 220 RVPPTLEVTQQP---VRAENQVNVTCQVRKFYPQRLQLTWLE-NGNVSR 264 (327)
T ss_dssp CBCCEEEEEEEC---CSSTTCCEEEEEEEEEBSSCEEEEEEE-TTEEEE
T ss_pred CCCCEEEEecCC---cCCCCcEEEEEEEccccCCCcEEEEEE-CCeEcc
Confidence 446666666443 4578889999999996544 899996 788764
No 227
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=97.90 E-value=1.5e-05 Score=48.32 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=30.2
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
.+++. |..+.+.+|++++|.|.+.|.|.+.|.|++.+
T Consensus 5 ~v~q~-p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~ 41 (119)
T 2e27_L 5 QMTQS-PSSLSASLGGKVTITCKANQDIKKKIAWYQHK 41 (119)
T ss_dssp CEEEE-CSEEEEETTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred eeEec-CCeEEEeCCCCEEEEEEeCCCCCceEEEEEEC
Confidence 44555 45666788999999999999999999999853
No 228
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=97.89 E-value=1.3e-05 Score=56.71 Aligned_cols=45 Identities=18% Similarity=0.434 Sum_probs=33.2
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
..+|.+...|+......+|. +.|.|.|.|.|+| +|+|++ ||.++.
T Consensus 353 ~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k-~g~~l~ 399 (457)
T 1hzh_H 353 PREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWES-NGQPEN 399 (457)
T ss_dssp CBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEE-CCEECc
Confidence 45677776666543345565 9999999998655 999997 788774
No 229
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=97.89 E-value=1.8e-05 Score=56.73 Aligned_cols=45 Identities=18% Similarity=0.432 Sum_probs=32.8
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
..+|.+...++......++ .+.|.|.|.|.|+| +|+|++ ||.++.
T Consensus 423 ~~~P~v~~~~~~~~~~~~~-~~~l~C~~~g~~p~~~~v~W~k-~g~~~~ 469 (523)
T 2rcj_C 423 PREPQVYTLPPSREEMTKN-QVSLTCLVKGFYPSDIAVEWES-NGQPEN 469 (523)
T ss_pred CCCCEEEEeCCChHHccCC-ceEEEEEEEeeECCCCEEEEEE-CCEECC
Confidence 3456666655554334445 49999999999887 999997 788875
No 230
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.89 E-value=6.9e-06 Score=53.35 Aligned_cols=45 Identities=29% Similarity=0.502 Sum_probs=30.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
.|.+...++....+..|..++|.|.|.| .|.| +|+|++ ||.++..
T Consensus 123 ~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~-~g~~l~~ 169 (245)
T 4ei6_B 123 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEE-CCEECCC
Confidence 4444333333333344677999999999 5556 899997 8888754
No 231
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=97.89 E-value=6.7e-06 Score=54.11 Aligned_cols=45 Identities=13% Similarity=0.288 Sum_probs=31.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEccc-CC-C-eEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-P-EIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~-P-~I~W~~~dG~~i 61 (74)
..+|.+...+|..+.+..|+.++|.|.|.|. |. | +|+|++ ||..+
T Consensus 10 ~~~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~-~g~~~ 57 (231)
T 2w59_A 10 CSPIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTR-EKSGN 57 (231)
T ss_dssp --CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEEC-SSSSC
T ss_pred CCCCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEc-CCeec
Confidence 3455544333555556688889999999995 75 6 999995 77766
No 232
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.88 E-value=7.9e-06 Score=50.94 Aligned_cols=33 Identities=27% Similarity=0.581 Sum_probs=27.4
Q ss_pred EecCCCCeEEEEEE-cccCCCeEEEEeCCCeeecC
Q psy11558 30 DFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 30 ~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~~ 63 (74)
.+..|..+.|.|.| .|+|.|+|+|.+ ||..+..
T Consensus 118 ~~~~g~~~~l~C~~~~~~p~~~v~W~~-~~~~~~~ 151 (209)
T 1nbq_A 118 SATIGNRAVLTCSEQDGSPPSEYTWFK-DGIVMPT 151 (209)
T ss_dssp EEETTSCEEECCCCCSCBSCCEEEEEE-TTCCCCS
T ss_pred ceecCCEEEEEEeCCCCCCCceeEEEE-CCeeCCC
Confidence 35678889999998 999999999997 6766654
No 233
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.88 E-value=2.1e-05 Score=51.56 Aligned_cols=37 Identities=11% Similarity=0.288 Sum_probs=30.4
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
.+++. |..+.+.+|++++|.|.+.|.|.|.|.|++.+
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~ 39 (242)
T 2znx_A 3 VLTQS-PATLSVTPGNSVSLSCRASQSIGNNLHXYQQK 39 (242)
T ss_dssp CEEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred cEEEc-CCeEEEcCCCcEEEEEEeCCCCCceEEEEEeC
Confidence 45666 45566788999999999999999999999753
No 234
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=97.88 E-value=2.8e-05 Score=51.45 Aligned_cols=36 Identities=14% Similarity=0.345 Sum_probs=29.4
Q ss_pred cEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 28 RIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 28 ~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
.+....|..+.|.|.|.|.|.|+|+|.+ ||..+...
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~ 148 (305)
T 2nzi_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQK-GQDLIDNN 148 (305)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEE-SSSBCCSS
T ss_pred cEEecCCCEEEEEEEECCCCCCEEEEEE-CCEECCCC
Confidence 4456678889999999999999999997 67666543
No 235
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.88 E-value=1.8e-05 Score=50.42 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=32.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+|.+...|. . .+.+|++++|.|.|.+ |.|.++|++ ||..+
T Consensus 6 ~~~P~i~~~p~-~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 47 (201)
T 1nkr_A 6 HRKPSLLAHPG-P-LVKSEETVILQCWSDV-MFEHFLLHR-EGMFN 47 (201)
T ss_dssp -CCCEEEEESC-S-EEETTCCEEEEEEESS-CCSEEEEEE-ESSSC
T ss_pred CCCCeEEEEcC-C-ccCCCCcEEEEEeccC-CCCEEEEEE-CCCcC
Confidence 46789988875 3 3567888999999986 899999997 56543
No 236
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=97.88 E-value=1.4e-05 Score=55.10 Aligned_cols=32 Identities=16% Similarity=0.496 Sum_probs=27.1
Q ss_pred CCCCeEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 33 NTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 33 ~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
+|+.+.|.|.|.|.|.|+|+|.+ ||..+....
T Consensus 260 ~g~~v~l~C~~~g~P~p~i~W~~-~g~~l~~~~ 291 (347)
T 2ifg_A 260 EMHHWCIPFSVDGQPAPSLRWLF-NGSVLNETS 291 (347)
T ss_dssp ESSSEEEEEEEEEESCCEEEEEE-TTEECCCCS
T ss_pred cCceEEEEEEeeecCCCcEEEEe-CCEECCCCc
Confidence 46779999999999999999996 888876443
No 237
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=97.88 E-value=3.5e-05 Score=52.15 Aligned_cols=38 Identities=18% Similarity=0.510 Sum_probs=30.3
Q ss_pred cceEEEcCCCc-EEecCCCCeEEEEEEcccCCC--eEEEEeCC
Q psy11558 18 GPIFIKEPPNR-IDFSNTTGAQVECTARGSPNP--EIIWIRSD 57 (74)
Q Consensus 18 ~P~fv~~Pp~~-v~~~~g~~v~L~C~A~G~P~P--~I~W~~~d 57 (74)
.|..+. |+.. +.+..|++++|+|.| |.|.| +|+|.+.|
T Consensus 6 ~~~~V~-pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~ 46 (210)
T 1gsm_A 6 KPLQVE-PPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLD 46 (210)
T ss_dssp CSEEEE-SCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESST
T ss_pred CCEEEe-CCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeecc
Confidence 345555 5554 678889999999999 99999 99999755
No 238
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=97.87 E-value=9.5e-06 Score=52.21 Aligned_cols=34 Identities=26% Similarity=0.657 Sum_probs=27.4
Q ss_pred EEecCCCCeEEEEEEcc-cCCCeEEEEeCCCeeec
Q psy11558 29 IDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 29 v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~~i~ 62 (74)
.....|..+.|.|.|.| .|.|+|+|++++|..+.
T Consensus 128 ~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~ 162 (226)
T 4f80_A 128 VKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIP 162 (226)
T ss_dssp EEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred eeeccCCceeeEEEeccCCCCCEEEEEECCceEcC
Confidence 34556778999999999 59999999987776543
No 239
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.87 E-value=2.1e-05 Score=48.90 Aligned_cols=39 Identities=21% Similarity=0.391 Sum_probs=30.0
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCCCe---EEEEeCCCeee
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPNPE---IIWIRSDGTAV 61 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~P~---I~W~~~dG~~i 61 (74)
++.|+ .+....|++|+|.|.+.|.|.|. |+|++.++..+
T Consensus 5 V~vp~-~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~ 46 (225)
T 4fmk_A 5 VRVLP-EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVV 46 (225)
T ss_dssp EECCS-EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEE
T ss_pred EEeCC-EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcce
Confidence 34544 46677888999999999999885 89998766543
No 240
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=97.87 E-value=5.4e-06 Score=54.80 Aligned_cols=45 Identities=27% Similarity=0.396 Sum_probs=30.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~~ 63 (74)
+|.+...++....+..|..++|.|.|.|.|+| +|+|.+ ||.++..
T Consensus 145 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~-~g~~l~~ 191 (268)
T 3pl6_D 145 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 191 (268)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-SSSEECT
T ss_pred CCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEE-CCEECCC
Confidence 45433333333334456789999999997765 999997 7887753
No 241
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.87 E-value=1.6e-05 Score=49.25 Aligned_cols=33 Identities=21% Similarity=0.497 Sum_probs=27.7
Q ss_pred CCCcEEecCCCCeEEEEEEcccCCCe---EEEEeCC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPNPE---IIWIRSD 57 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~P~---I~W~~~d 57 (74)
.|+.+.+..|++++|.|.+.|.|.|. |+|++.+
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~ 40 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVD 40 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEEC
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECC
Confidence 35677788999999999999999875 8999743
No 242
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.87 E-value=1.9e-05 Score=56.54 Aligned_cols=48 Identities=15% Similarity=0.113 Sum_probs=36.5
Q ss_pred ccceEEEcCC--CcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCeeecCCC
Q psy11558 17 LGPIFIKEPP--NRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGDVP 65 (74)
Q Consensus 17 ~~P~fv~~Pp--~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~i~~~~ 65 (74)
.+|.+...|. ..+.+..|+.+.|.|.|.|+|.|+ |+|++ ||.++....
T Consensus 309 ~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k-~g~~~~~~~ 359 (524)
T 2ec8_A 309 DKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY-MNRTFTDKW 359 (524)
T ss_dssp SSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES-SSCBCSSSB
T ss_pred ccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE-CCeeccCCc
Confidence 4566655543 356678888999999999999999 99996 677665443
No 243
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.86 E-value=6.3e-06 Score=54.64 Aligned_cols=45 Identities=29% Similarity=0.502 Sum_probs=30.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
+|.+...++.......|..++|.|.|.| .|.| +|+|++ ||.++..
T Consensus 148 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 194 (270)
T 3qib_D 148 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 194 (270)
T ss_dssp CCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEE-CCEECCC
Confidence 3443333333322334677999999999 7878 899997 8888754
No 244
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=97.86 E-value=1.7e-05 Score=49.38 Aligned_cols=29 Identities=7% Similarity=0.135 Sum_probs=24.7
Q ss_pred EecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 30 DFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 30 ~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
.+..|+.+.|.|.|.|.|.|+|+|.++++
T Consensus 108 ~v~~g~~~~l~C~~~~~p~~~v~W~~~~~ 136 (184)
T 2ny1_B 108 HLLQGQSLTLTLESPPGSSPSVQCRSPRG 136 (184)
T ss_dssp EEETTCCEEEEEECCTTCCCEEEEECTTS
T ss_pred eeecCCCEEEEEEcCCCCCCEEEEEeCCC
Confidence 45678889999999999999999997443
No 245
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.86 E-value=1.5e-05 Score=54.05 Aligned_cols=46 Identities=20% Similarity=0.425 Sum_probs=33.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC---eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP---EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P---~I~W~~~dG~~i~~ 63 (74)
.|.....+|..+.+..|+.+.|.|.|.|. |.| +|+|++++|..+..
T Consensus 112 ~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~ 161 (323)
T 2wqr_A 112 GVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNH 161 (323)
T ss_dssp GCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCC
T ss_pred CCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccc
Confidence 44443444555556678889999999996 577 99999877776643
No 246
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=97.86 E-value=1.6e-05 Score=50.97 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=29.5
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDG 58 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG 58 (74)
..|.+...++... ...|+.+.|.|.|.|. |.| +|+|.++++
T Consensus 124 ~~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 124 TAPSVYPLVPGCS-DTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp BCCEEEEECCCSC-CSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred CCCeEEEcccccc-cCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 3455555444332 3467789999999998 999 999987544
No 247
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=97.85 E-value=1.9e-05 Score=57.95 Aligned_cols=36 Identities=17% Similarity=0.409 Sum_probs=29.8
Q ss_pred CcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 27 NRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 27 ~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
....+..|+.+.|.|.|.|+|.|+|+|++ ||.++..
T Consensus 389 ~~~~~~~g~~~~l~C~~~g~p~~~i~W~~-~g~~~~~ 424 (642)
T 1e07_A 389 SYTYYRPGVNLSLSCHAASNPPAQYSWLI-DGNIQQH 424 (642)
T ss_pred CceEecCCCcEEEEEEcCccCCCeEEEEE-CCEEcCC
Confidence 34456688889999999999999999996 7877653
No 248
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=97.85 E-value=1.1e-05 Score=51.70 Aligned_cols=42 Identities=17% Similarity=0.415 Sum_probs=29.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i 61 (74)
.|.+...++... ...|+.+.|.|.|.|. |.| +|+|.+ ||..+
T Consensus 127 ~P~i~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~~ 170 (222)
T 1q9r_B 127 PPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLSS 170 (222)
T ss_dssp CCEEEEECCCSC-CCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBCT
T ss_pred CCeEEEcccccc-ccCCCcEEEEEEEccEECCCCEEEEec-CCeEc
Confidence 455444443332 3467789999999996 999 999986 67654
No 249
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=97.84 E-value=1.3e-05 Score=50.08 Aligned_cols=33 Identities=27% Similarity=0.581 Sum_probs=26.7
Q ss_pred EecCCCCeEEEEE-EcccCCCeEEEEeCCCe-eecC
Q psy11558 30 DFSNTTGAQVECT-ARGSPNPEIIWIRSDGT-AVGD 63 (74)
Q Consensus 30 ~~~~g~~v~L~C~-A~G~P~P~I~W~~~dG~-~i~~ 63 (74)
.+..|+.+.|.|. +.|+|.|+|+|.+ ||. ++..
T Consensus 115 ~~~~g~~~~l~C~~~~~~p~~~i~W~~-~~~~~l~~ 149 (212)
T 1f97_A 115 SVTIGNRAVLTCSEHDGSPPSEYSWFK-DGISMLTA 149 (212)
T ss_dssp EEETTSCEEEEEECSCCBSCCEEEEEE-TTEESBC-
T ss_pred ccCCCCeEEEEEEcccCcCCCEEEEEe-CCcccccc
Confidence 3557788999999 8999999999997 666 6654
No 250
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.84 E-value=5.4e-05 Score=47.81 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=32.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
.+|.|..+|.. .+..|++++|.|.|.|. .+.++|.+ ||..+
T Consensus 3 ~~P~i~~~p~~--~v~~G~~v~L~C~~~~~-~~~~~w~k-~g~~~ 43 (188)
T 1oll_A 3 PKPFIWAEPHF--MVPKEKQVTICCQGNYG-AVEYQLHF-EGSLF 43 (188)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEECCTT-CCEEEEEE-TTEEE
T ss_pred CCCEEEeecCC--cCCCCCCEEEEEecCCC-CCEEEEEE-CCCcc
Confidence 57899999765 35678899999999984 58999996 67665
No 251
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.84 E-value=2.6e-05 Score=47.43 Aligned_cols=37 Identities=22% Similarity=0.583 Sum_probs=30.2
Q ss_pred EEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDG 58 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG 58 (74)
+.++|..+.+..|++|+|.|.+.|. |.+.|.|++.+|
T Consensus 6 v~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~ 43 (127)
T 2jju_A 6 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 43 (127)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSS
T ss_pred EEeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCC
Confidence 3445667778899999999999987 789999998654
No 252
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=97.83 E-value=2.8e-05 Score=46.33 Aligned_cols=36 Identities=22% Similarity=0.496 Sum_probs=29.3
Q ss_pred EcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDG 58 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG 58 (74)
..+|..+....|++|+|.|.+.+. |.+.|.|++.+|
T Consensus 11 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~ 47 (120)
T 2yz1_A 11 TQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVG 47 (120)
T ss_dssp ECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSS
T ss_pred ECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCC
Confidence 334566778899999999999987 788999998654
No 253
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=97.83 E-value=4.5e-05 Score=57.56 Aligned_cols=44 Identities=18% Similarity=0.311 Sum_probs=35.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEE-EEe-CCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEII-WIR-SDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~-W~~-~dG~~i~ 62 (74)
.+|.|. +|+ ++.+..|+.+.|.|.|.|+|.|.|+ |++ +||..+.
T Consensus 164 ~~p~~~-~~~-~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~ 209 (731)
T 2v5y_A 164 RTPHFL-RIQ-NVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAP 209 (731)
T ss_dssp SSCEEC-CCC-CEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEE
T ss_pred cccccc-ccc-ceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCcccc
Confidence 568887 544 5667788899999999999999999 774 5787653
No 254
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.83 E-value=1.7e-05 Score=50.93 Aligned_cols=40 Identities=23% Similarity=0.433 Sum_probs=28.5
Q ss_pred eEEEcCCCcEE-ecCCCCeEEEEEEcccC----CCeEEEEeCCCeee
Q psy11558 20 IFIKEPPNRID-FSNTTGAQVECTARGSP----NPEIIWIRSDGTAV 61 (74)
Q Consensus 20 ~fv~~Pp~~v~-~~~g~~v~L~C~A~G~P----~P~I~W~~~dG~~i 61 (74)
+|+.. |+... +..|+++.|.|.|.|.| .++|+|+++ |..+
T Consensus 4 v~~~~-P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~-~~~~ 48 (207)
T 2vol_A 4 VFIFP-PKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVD-DVEV 48 (207)
T ss_dssp EEEEC-CCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEET-TEEE
T ss_pred EEEeC-cChhhhhccCCceEEEEEEeCcccCCCceEEEEEEC-Cccc
Confidence 45554 55322 56888999999999995 249999985 4554
No 255
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.83 E-value=2.1e-05 Score=48.71 Aligned_cols=34 Identities=12% Similarity=0.284 Sum_probs=28.2
Q ss_pred ecCCCCeEEEEEEcccCCC--eEEEEeCCCeeecCCC
Q psy11558 31 FSNTTGAQVECTARGSPNP--EIIWIRSDGTAVGDVP 65 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~~~~ 65 (74)
+.+|+.+.|.|.|.|.|.| +++|++ ||..+....
T Consensus 10 v~~G~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~~~ 45 (184)
T 3b5h_A 10 EDLGSKILLTCSLNDSATEVTGHRWLK-GGVVLKEDA 45 (184)
T ss_dssp EEETTEEEEEEEEESCSSCCCEEEEES-SSEEEECTT
T ss_pred EecCCCEEEEEECCCCCCCceEEEEEe-CCEEeeccc
Confidence 4568889999999999999 999996 888876543
No 256
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=97.83 E-value=1.8e-05 Score=56.83 Aligned_cols=39 Identities=8% Similarity=0.204 Sum_probs=28.4
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
+..+.+|. .+++.+|+++.|.|.+.|.|.|+|+|.++++
T Consensus 49 ~~~~~~~~-~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~ 87 (423)
T 3qs7_E 49 SGTVYEAA-AVEVDVSASITLQVLVDAPGNISCLWVFKHS 87 (423)
T ss_dssp -------C-EEEECSSCCEEEEEECSCCSSCEEEEEETTE
T ss_pred Ccceeccc-cEEEecCCcEEEEEEEEcCCCCeEEEEECCC
Confidence 45667754 7788999999999999999999999997543
No 257
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.83 E-value=7.5e-06 Score=54.04 Aligned_cols=46 Identities=28% Similarity=0.505 Sum_probs=31.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
.+|.+...++.......|..++|.|.|.| .|.| +|+|.+ ||.++..
T Consensus 122 ~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~l~~ 169 (253)
T 3to4_D 122 FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 169 (253)
T ss_dssp BCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEE-CCEECCC
Confidence 34444443333322334567999999999 7778 999997 8888754
No 258
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=97.82 E-value=5.3e-06 Score=55.64 Aligned_cols=44 Identities=30% Similarity=0.497 Sum_probs=29.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CC-CeEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i~ 62 (74)
+|.+...++....+..|..++|.|.|.|. |+ |+|+|.+ ||.++.
T Consensus 149 ~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k-~g~~l~ 194 (279)
T 2wbj_D 149 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVH 194 (279)
T ss_dssp CCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEE-TTEECC
T ss_pred CCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEE-CCEECC
Confidence 44444333333223356779999999998 54 7999997 787764
No 259
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.82 E-value=2.8e-05 Score=51.94 Aligned_cols=40 Identities=13% Similarity=0.288 Sum_probs=32.5
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
..+.+++. |..+.+.+|++++|.|.+.|.|.|.|.|++.+
T Consensus 11 ~~~~v~~~-p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~ 50 (276)
T 3auv_A 11 GDIQMTQS-PSSLSASVGDRVTITCRASQDVSTAVAWYQQK 50 (276)
T ss_dssp -CCCEEEE-CSEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred cceeEEeC-CCeEEEcCCCCEEEEeEcCCCCCCcEEEEEEC
Confidence 45567776 45666788999999999999999999999754
No 260
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.82 E-value=2e-05 Score=51.22 Aligned_cols=40 Identities=10% Similarity=-0.038 Sum_probs=31.4
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-----EEEEeCCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-----IIWIRSDG 58 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-----I~W~~~dG 58 (74)
|.+...++..+.+..|++++|.|.+.|.|.|. |+|++.++
T Consensus 3 ~~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~ 47 (248)
T 3pv7_A 3 LKVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSL 47 (248)
T ss_dssp EEEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECS
T ss_pred eEEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcC
Confidence 34444556666777899999999999999997 99998543
No 261
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.82 E-value=3.1e-05 Score=45.96 Aligned_cols=38 Identities=11% Similarity=0.283 Sum_probs=30.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+.+++. |..+...+|++++|.|.++|.+.+.|.|++.+
T Consensus 5 ~~v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~ 42 (111)
T 1i3g_L 5 IVLTQS-HKFMSTSVGDRVSITCKASQDVGTAVAWYQQK 42 (111)
T ss_dssp CCEEES-CSEEECCTTCCEEEEEEESSCCTTCEEEEEEC
T ss_pred ceEEEe-CCEEEEcCCCCEEEEEEeCCCCCCCEEEEEEC
Confidence 345565 45567888999999999999999999999854
No 262
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.81 E-value=1.4e-05 Score=50.39 Aligned_cols=29 Identities=31% Similarity=0.570 Sum_probs=24.3
Q ss_pred ecCCCCeEEEEEEcccCCCeEEEEeCCCee
Q psy11558 31 FSNTTGAQVECTARGSPNPEIIWIRSDGTA 60 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~ 60 (74)
..+|+.+.|.|.|.|.|.|+|+|.+ +|..
T Consensus 115 ~~~g~~v~l~C~~~g~P~p~v~W~~-~~~~ 143 (202)
T 3bp6_B 115 VPGTGEVQLTCQARGYPLAEVSWQN-VSVP 143 (202)
T ss_dssp CTTTCCEEEEEEEEEBSCCEEEETT-CCSC
T ss_pred cCCCCeEEEEEEccccCCceEEEEe-CCCC
Confidence 3467789999999999999999987 4443
No 263
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=97.81 E-value=6.3e-06 Score=55.83 Aligned_cols=45 Identities=18% Similarity=0.327 Sum_probs=22.4
Q ss_pred cceEEEcCCCcE-EecCCCCeEEEEEEc----ccCCCeEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRI-DFSNTTGAQVECTAR----GSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v-~~~~g~~v~L~C~A~----G~P~P~I~W~~~dG~~i~~ 63 (74)
+|.++..+...+ .+..|+.+.|.|.|. |+|.|+|+|++ ||..+..
T Consensus 224 ~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~-~g~~l~~ 273 (349)
T 4dep_C 224 PPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTI-DGKKPDD 273 (349)
T ss_dssp SCEEC----------------CCCEEEEECCCTTCCCEEEEES-SCC----
T ss_pred CCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEE-CCEEccc
Confidence 566665543332 566788899999999 68999999996 7777654
No 264
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=97.81 E-value=3.7e-05 Score=50.39 Aligned_cols=31 Identities=16% Similarity=0.476 Sum_probs=24.8
Q ss_pred CC-CCeEEEEEEccc-CCC-eEEEEeCCCeeecC
Q psy11558 33 NT-TGAQVECTARGS-PNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 33 ~g-~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~~ 63 (74)
.| ..+.|.|.|.|. |.| +|+|.+.||..+..
T Consensus 139 ~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~ 172 (232)
T 1dn0_B 139 SDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISS 172 (232)
T ss_dssp --CCSEEEEEEEEEEBSSCCEEEEEETTSCEECC
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceee
Confidence 45 679999999997 888 99999868877643
No 265
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=97.81 E-value=1.1e-05 Score=53.42 Aligned_cols=45 Identities=29% Similarity=0.495 Sum_probs=30.1
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~~ 63 (74)
+|.+...++....+..|..+.|.|.|.|. |.| +|+|++ ||..+..
T Consensus 122 ~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~-~g~~l~~ 168 (252)
T 1oga_E 122 PPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWV-NGKEVHS 168 (252)
T ss_dssp CCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECS
T ss_pred CCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEE-CCEECCC
Confidence 45444433333223346679999999996 764 999997 7877653
No 266
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=97.80 E-value=3.5e-05 Score=48.74 Aligned_cols=36 Identities=19% Similarity=0.403 Sum_probs=29.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 56 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 56 (74)
|.+++. + .+.+..|++++|.|.+.|. |.|.|+|++.
T Consensus 2 ~~v~~~-p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 38 (218)
T 3s96_B 2 LVLTQS-S-SASFSLGASAKLTCTLNSQHSTYTIEWYQQ 38 (218)
T ss_dssp CSEECC-S-EEEEETTSCEEEEEEECGGGTTCCEEEEEE
T ss_pred CeEEeC-C-cEEECCCCcEEEEEECCCCCCCcEEEEEEE
Confidence 344444 5 6778889999999999999 9999999973
No 267
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=97.80 E-value=5.3e-05 Score=48.64 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=28.1
Q ss_pred cCCCcEEecCCCCeEEEEEEcccCCC---eEEEEeCC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSPNP---EIIWIRSD 57 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P~P---~I~W~~~d 57 (74)
.|++.+.+..|++++|.|.+.|.|.| .|+|++++
T Consensus 9 ~P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~ 45 (226)
T 4f80_A 9 GPSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSS 45 (226)
T ss_dssp CCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETT
T ss_pred CCCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECC
Confidence 45566778889999999999998877 69999854
No 268
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.80 E-value=2.8e-05 Score=54.73 Aligned_cols=45 Identities=16% Similarity=0.375 Sum_probs=31.9
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
..+|.+...++......+| .++|.|.|.| .|+| +|+|++ ||..+.
T Consensus 344 ~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 390 (444)
T 1igt_B 344 VRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTN-NGKTEL 390 (444)
T ss_dssp CBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEE-CCEEcc
Confidence 4567776665544333445 4999999999 5666 999997 777763
No 269
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.80 E-value=1.6e-05 Score=50.88 Aligned_cols=45 Identities=20% Similarity=0.386 Sum_probs=31.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEccc-C-CCeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-P-NPEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P-~P~I~W~~~dG~~i~ 62 (74)
..+|.+...++..... .|+.++|.|.|.|. | .|+|+|.+ ||..+.
T Consensus 133 ~~~p~v~~~~~~~~~~-~g~~v~l~C~~~~~~p~~~~v~W~k-~g~~~~ 179 (237)
T 3sob_L 133 VAAPSVFIFPPSDEQL-KSGTASVVCLLNNFYPREAKVQWKV-DNALQS 179 (237)
T ss_dssp CBCCEEEEECCCHHHH-HHTEEEEEEEEEEEBSSCCEEEEEE-TTEECC
T ss_pred CCCCceEEeCCChhhc-cCCceEEEEEEcccCCCceEEEEEE-CCCCCC
Confidence 4456666554443322 35569999999994 5 59999996 787765
No 270
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=97.79 E-value=7.8e-05 Score=46.24 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.7
Q ss_pred ecCCCCeEEEEEE-cccCCCeEEEEeCCCeeecC
Q psy11558 31 FSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 31 ~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~~ 63 (74)
+..|+.+.|.|.| .|.|.|+++|++ ||..+..
T Consensus 97 ~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~~ 129 (176)
T 1f2q_A 97 VMEGQPLFLRCHGWRNWDVYKVIYYK-DGEALKY 129 (176)
T ss_dssp EETTSCEEEEEEEGGGCCEEEEEEEE-TTEECCS
T ss_pred eeCCCCEEEEEEecCCCCceEEEEEE-CCEEEee
Confidence 4578889999999 578889999997 8887753
No 271
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.78 E-value=1.9e-05 Score=51.00 Aligned_cols=37 Identities=19% Similarity=0.345 Sum_probs=30.3
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccC----CCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P----~P~I~W~~~d 57 (74)
.+++. |..+.+.+|+.++|.|.+.|.| .|.|+|++.+
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~ 43 (240)
T 1moe_A 3 VLTQS-PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQK 43 (240)
T ss_dssp CEEEE-CSEEEECTTSCEEEEEEESSCCEETTEECEEEEEEC
T ss_pred ceEee-CCeEEecCCCCEEEEEeCCCccccCCCceEEEEEEC
Confidence 34555 5666788899999999999999 8999999853
No 272
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.78 E-value=4.2e-05 Score=50.24 Aligned_cols=38 Identities=13% Similarity=0.344 Sum_probs=31.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.|.+++.| ..+.+..|++++|.|.+.|.|.|.|.|++.
T Consensus 138 ~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 175 (256)
T 3umt_A 138 DIQLTQSP-SSLSASLGERVSITCRASQDIGSNLNWLQQ 175 (256)
T ss_dssp CCCEEEEC-SEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ccEEEcCC-CeEEEECCCCEEEEEEEecCCCcEEEEEEE
Confidence 56777764 555678899999999999999999999974
No 273
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.78 E-value=1.8e-05 Score=52.79 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=30.1
Q ss_pred ccc-eEEEcCCCcEE-ecCCCCeEEEEEEccc---CCC-eEEEEeCCCe
Q psy11558 17 LGP-IFIKEPPNRID-FSNTTGAQVECTARGS---PNP-EIIWIRSDGT 59 (74)
Q Consensus 17 ~~P-~fv~~Pp~~v~-~~~g~~v~L~C~A~G~---P~P-~I~W~~~dG~ 59 (74)
.+| +|++ |++... +..|++++|.|.|.|. |.| +|+|+++++.
T Consensus 14 ~~P~v~~~-pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~ 61 (239)
T 1i1c_A 14 EVSSVFIF-PPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVE 61 (239)
T ss_dssp ---CEEEE-CCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCE
T ss_pred cCCEEEEE-CCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCcc
Confidence 344 4555 566543 5678889999999998 988 9999986644
No 274
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.78 E-value=3.8e-05 Score=50.04 Aligned_cols=38 Identities=13% Similarity=0.326 Sum_probs=31.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC-----CCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-----~P~I~W~~~ 56 (74)
.|.+++.| ..+.+..|+.++|.|.+.|.| .|.|+|++.
T Consensus 38 ~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 38 ELVMTQSP-LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp CCCEEEEC-SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred ceeEEeCC-ceEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 56677664 566788899999999999999 599999974
No 275
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=97.77 E-value=1.8e-05 Score=53.52 Aligned_cols=38 Identities=11% Similarity=0.200 Sum_probs=30.1
Q ss_pred EcCCCcEEecCCCCeEEEEEEccc-------CCCeEEEEeCCCeeec
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGS-------PNPEIIWIRSDGTAVG 62 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~-------P~P~I~W~~~dG~~i~ 62 (74)
..|.+ ..+..|+.+.|.|.|.|+ |.|+|+|++ ||..|.
T Consensus 9 i~P~~-~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~-~g~~i~ 53 (303)
T 1i1r_A 9 ISPES-PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKT-NHFTIP 53 (303)
T ss_dssp EESSS-CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEE-TTEECC
T ss_pred EccCC-ceEeCCCCEEEEEEECCccccccCCChhheEEEE-CCEECC
Confidence 44444 457788899999999975 999999997 788774
No 276
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.77 E-value=3.8e-05 Score=51.01 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=31.3
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCC-----eEEEEeC-CCee
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRS-DGTA 60 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-----~I~W~~~-dG~~ 60 (74)
|.+++. |..+.+..|++++|.|.+.|.|.| .|+|++. +|..
T Consensus 122 ~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~ 168 (256)
T 1nqb_A 122 IELTQT-PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQS 168 (256)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSC
T ss_pred ccEEec-CcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCC
Confidence 455555 455567788899999999999986 9999984 4543
No 277
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=97.77 E-value=5.6e-05 Score=49.52 Aligned_cols=42 Identities=10% Similarity=0.176 Sum_probs=32.4
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..|.+...| +. .+.+|++++|.|.+.|.|.|+++|.+ ||..+
T Consensus 105 ~~P~i~~~p-~~-~v~~G~~v~L~C~~~~~~~~~~~W~k-~g~~~ 146 (218)
T 1uct_A 105 GKPFLSADR-GL-VLMPGENISLTCSSAHIPFDRFSLAK-EGELS 146 (218)
T ss_dssp CCCEEEESS-CS-EECTTCCCEEEEECSSSCCSEEEEEE-TTCSS
T ss_pred cCCEEEeCC-CC-ccCCCCCEEEEEeCCCCCCCEEEEEE-CCCcc
Confidence 467777665 33 35688889999988899999999997 66554
No 278
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.76 E-value=2.5e-05 Score=49.39 Aligned_cols=31 Identities=16% Similarity=0.471 Sum_probs=27.3
Q ss_pred cCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
.|+ .+.+..|+.++|.|.+.|.|.|.|+|++
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k 36 (213)
T 3mj8_L 6 QPP-LVSVALGQKATITCSGDKLSDVYVHWYQ 36 (213)
T ss_dssp CCS-EEEEETTSCEEEEEECSSTTTSCEEEEE
T ss_pred eCC-cEEEeCCCCEEEEEEcCCCCCceEEEEE
Confidence 345 6678889999999999999999999997
No 279
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.76 E-value=1.8e-05 Score=50.20 Aligned_cols=31 Identities=13% Similarity=0.418 Sum_probs=27.0
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
|..+.+..|++++|.|.+.|.|.|.|+|++.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 36 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQ 36 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEE
Confidence 4556678899999999999999999999874
No 280
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=97.74 E-value=1.3e-05 Score=52.19 Aligned_cols=45 Identities=29% Similarity=0.495 Sum_probs=29.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~~ 63 (74)
.|.+...++....+..|..+.|.|.|.|. |+| +|+|.+ ||.++..
T Consensus 123 ~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 169 (245)
T 3nfj_J 123 PPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp CCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEE-TTEEECT
T ss_pred CCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEE-CCEECCC
Confidence 44444333433333346779999999995 545 789986 8888754
No 281
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.74 E-value=3.8e-05 Score=52.00 Aligned_cols=35 Identities=11% Similarity=0.308 Sum_probs=28.7
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
.+.+|+ .+.+.+|++++|.|.+.|.| .|.|.|++.
T Consensus 25 ~v~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 61 (291)
T 2gki_A 25 QLQQSG-PELVKPGASVKMSCKASGYTFTSYVMHWVKQ 61 (291)
T ss_dssp EEEECC-CEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEcCC-cEEecCCCCEEEEEeccCCcccccEEEEEEE
Confidence 445555 56688899999999999998 799999985
No 282
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=97.74 E-value=5.3e-05 Score=45.00 Aligned_cols=35 Identities=14% Similarity=0.349 Sum_probs=28.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 56 (74)
+++. |..+...+|++|+|.|.+.|. |.+.|.|++.
T Consensus 3 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (111)
T 2ywz_A 3 VDQT-PRTITKETGESLTIKCVLKDHSCGLSSTTWYRT 39 (111)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred eEEC-CCcEEEccCCCEEEEeEECCCCCCCCEEEEEEe
Confidence 4455 556678889999999999987 6899999975
No 283
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=97.74 E-value=1.4e-05 Score=51.35 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=26.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC-CC-eEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP-NP-EIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~P-~I~W~~~dG~~i~ 62 (74)
+|.+...++..... .|+.++|.|.|.|.| .| +|+|.+ ||.++.
T Consensus 134 ~p~v~~~~~~~~~~-~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~ 178 (233)
T 3bqu_C 134 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQ 178 (233)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCEEEEEEE-C-----
T ss_pred CCEEEEeCCCHHhh-cCCceEEEEEEccccCCceEEEEEE-CCeeCC
Confidence 56666554443222 466799999999964 44 799997 777654
No 284
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.73 E-value=4.3e-06 Score=56.22 Aligned_cols=37 Identities=22% Similarity=0.627 Sum_probs=0.0
Q ss_pred CCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCCeeecC
Q psy11558 26 PNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG~~i~~ 63 (74)
++.+.+..|+.+.|.|.+.|. |.|+|+|++ ||..+..
T Consensus 15 ~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k-~g~~~~~ 52 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPPPGGGPMGPTVWVK-DGTGLVP 52 (334)
T ss_dssp ---------------------------------------
T ss_pred cCcEEEecCCcEEEEeeCCCCCCCcceEEEE-CCeeCCC
Confidence 455567788899999999998 689999996 7776644
No 285
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=97.73 E-value=7.8e-05 Score=48.15 Aligned_cols=42 Identities=12% Similarity=0.374 Sum_probs=30.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG~~i~ 62 (74)
+|.+...|. . .+.+|+.+.|.|.+.|. |.|+|+|++ ||..+.
T Consensus 89 ~p~~~~~~~-~-~v~~G~~v~L~C~~~~~~p~~~v~W~k-~g~~~~ 131 (204)
T 3sgj_C 89 GWLLLQAPR-W-VFKEEDPIHLRCHSWKNTALHKVTYLQ-NGKGRK 131 (204)
T ss_dssp SSEEEECSC-S-EEETTCCEEEEEEEGGGCCCEEEEEEE-TTEEEE
T ss_pred CceEecCCc-e-eEeCCCcEEEEEEecCCCCCceEEEEE-CCcEee
Confidence 455555544 3 35578889999999766 679999996 777653
No 286
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=97.73 E-value=2.5e-05 Score=49.72 Aligned_cols=42 Identities=17% Similarity=0.413 Sum_probs=29.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 60 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~ 60 (74)
.+|.+...++... ...|+.++|.|.|.|. |.| +|+|.+ ||..
T Consensus 117 ~~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~~ 160 (210)
T 3d9a_H 117 TPPSVYPLAPGSA-AQTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 160 (210)
T ss_dssp BCCEEEEECCTTS-CCCSSEEEEEEEEEEEBSSCCEEEEGG-GTBC
T ss_pred CCCEEEEecCCcc-cccCCcEEEEEEEeeEecCCcEEEEee-CCcc
Confidence 3455554444332 3467789999999998 999 999986 5654
No 287
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=97.72 E-value=0.00011 Score=45.55 Aligned_cols=31 Identities=10% Similarity=0.372 Sum_probs=25.8
Q ss_pred ecCCCCeEEEEEEcccCCC-eEEEEeCCCeeec
Q psy11558 31 FSNTTGAQVECTARGSPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P~P-~I~W~~~dG~~i~ 62 (74)
+..|..+.|.|.|.|.|+| +|+|++ ||..+.
T Consensus 100 ~~~g~~~~l~C~~~~~~~~~~~~W~k-~g~~~~ 131 (175)
T 1fnl_A 100 FKEEDPIHLRCHSWKNTALHKVTYLQ-NGKDRK 131 (175)
T ss_dssp EETTCCEEEEEEECTTCCCEEEEEEE-TTEEEE
T ss_pred ecCCCCEEEEEEcCCCCCceEEEEEE-CCeEcc
Confidence 5678889999999998765 999997 777663
No 288
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.72 E-value=3.6e-05 Score=54.94 Aligned_cols=47 Identities=19% Similarity=0.349 Sum_probs=33.3
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCC--CeEEEEeCCCeeecC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSDGTAVGD 63 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~--P~I~W~~~dG~~i~~ 63 (74)
..+|.+...|+....+..|..+.|.|.|.|.++ ++|+|++ ||.++..
T Consensus 347 ~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 395 (475)
T 1iga_A 347 TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQ-GSQELPR 395 (475)
T ss_pred CCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEE-CCEECCC
Confidence 456666665555433456777999999999743 5999997 7887753
No 289
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.72 E-value=2.2e-05 Score=52.95 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=34.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEc-------ccCCCeEEEEeCCCee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTAR-------GSPNPEIIWIRSDGTA 60 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~-------G~P~P~I~W~~~dG~~ 60 (74)
...|.|...|. .+.+.+|+.+.|.|.+. |.|.|+|+|.+ ||..
T Consensus 16 ~~~p~~~~~~~-~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k-~~~~ 65 (339)
T 3o4o_C 16 RSCRFRGRHYK-REFRLEGEPVALRCPQVPYWLWASVSPRINLTWHK-NDSA 65 (339)
T ss_dssp --CEEEEECSC-CEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEE-SSCC
T ss_pred hhhHhhCcCce-EEEEECCccEEEEeccccccccccCCCCceEEEEE-CCCC
Confidence 45789999865 44577888999999998 99999999997 5554
No 290
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=97.72 E-value=3.2e-05 Score=51.79 Aligned_cols=41 Identities=17% Similarity=0.356 Sum_probs=33.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
...+.+++. |..+.+..|++++|.|.+.|.|.|.|+|++.+
T Consensus 22 ~~~~~v~~~-p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 62 (279)
T 2wbj_D 22 GGGAVVSQH-PSWVISKSGTSVKIECRSLDFQATTMFWYRQF 62 (279)
T ss_dssp CCCCCEEEE-CSEEEEETTSCEEEEEEESSSCEEEEEEEEEC
T ss_pred cccceEEeC-CCeEEecCCCeEEEEEEeCCCCCCeEEEEEeC
Confidence 345677776 55667788999999999999999999999854
No 291
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.71 E-value=4.5e-05 Score=48.65 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=28.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC-Ce
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD-GT 59 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d-G~ 59 (74)
+.+|+ .+.+..|++++|.|.+.|.| .|.|+|++.+ |.
T Consensus 4 ~~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~ 43 (219)
T 1c1e_H 4 LVQSG-PELKKPGETVKISCKASGYMFTNYGMNWVKQAPGK 43 (219)
T ss_dssp EEECC-CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTS
T ss_pred EeCCC-CeEecCCCcEEEEEEEeCcccccceEEEEEeCCCC
Confidence 34444 45677898999999999986 8999999864 44
No 292
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.71 E-value=4.3e-05 Score=50.44 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=30.0
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.+++. |..+.+.+|++++|.|.+.|.|.|.|.|++.
T Consensus 5 ~v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~ 40 (256)
T 3tf7_C 5 SVTQP-DARVTVSEGASLQLRCKYSYSATPYLFWYVQ 40 (256)
T ss_dssp EEECS-CSEEEEETTSCEEECCEEECSSCCEEEEEEE
T ss_pred EEEec-CceEEecCCCeEEEEEEeCCCCCceEEEEEE
Confidence 44444 5666788899999999999999999999873
No 293
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.71 E-value=3.9e-05 Score=52.00 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=29.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~ 63 (74)
.+|.+...++..... .|..++|.|.|.| .|.+ +|+|++ ||.+|..
T Consensus 218 ~~P~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~l~~ 264 (323)
T 2wqr_A 218 AAPEVYAFATPEWPG-SRDKRTLACLIQNFMPEDISVQWLH-NEVQLPD 264 (323)
T ss_dssp BCCEEEEEECCCCTT-CTTEEEEEEEEEEEBSSCCEEEEEE-TTEECCG
T ss_pred CCCEEEEeCCChHHh-cCCcEEEEEEeeeeeCCCcEEEEEE-CCEECCC
Confidence 456554443332112 3778999999999 4544 899997 7887753
No 294
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.70 E-value=1.9e-05 Score=53.21 Aligned_cols=44 Identities=20% Similarity=0.426 Sum_probs=34.6
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEE---cccC-CCeEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTA---RGSP-NPEIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A---~G~P-~P~I~W~~~dG~~i~ 62 (74)
.+|.++.. +..+.+..|+.+.|.|.| .|+| .|.+.|++ ||.++.
T Consensus 225 ~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~-~g~~~~ 272 (339)
T 3o4o_C 225 TIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA-NDTHIE 272 (339)
T ss_dssp CCCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEES-SSSCSS
T ss_pred CCCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEE-CCeecc
Confidence 46677665 555567788889999999 9999 99999985 776653
No 295
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=97.70 E-value=5.7e-05 Score=44.68 Aligned_cols=35 Identities=14% Similarity=0.457 Sum_probs=27.5
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+++. |..+...+|++++|.|.+.+.+ |.|.|++.+
T Consensus 4 v~q~-p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~ 38 (113)
T 1h5b_A 4 VEQS-PSALSLHEGTDSALRCNFTTTM-RSVQWFRQN 38 (113)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEESSCC-SEEEEEEEC
T ss_pred eEEC-CCEEEEecCCcEEEEEEECCCC-ceEEEEEEC
Confidence 3455 4556678899999999999976 899998753
No 296
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=97.70 E-value=6.3e-05 Score=48.76 Aligned_cols=35 Identities=17% Similarity=0.444 Sum_probs=29.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
.+++. |..+.+..|++++|.|.+.|.|.|.|.|++
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (246)
T 4dzb_B 3 VVSQH-PSWVISKSGTSVKIECRSLDFQATTMFWYR 37 (246)
T ss_dssp CEEEE-CSEEEEETTSCEEEEEEESSSCCCSEEEEE
T ss_pred ccEEC-CcEEEEeCCCcEEEEeEecCCCceEEEEEE
Confidence 34555 566667889999999999999999999997
No 297
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.69 E-value=5.9e-05 Score=50.25 Aligned_cols=45 Identities=18% Similarity=0.423 Sum_probs=31.5
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcc-cCC-CeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPN-PEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~-P~I~W~~~dG~~i~ 62 (74)
..+|.+...++..... .|..+.|.|.|.| .|+ .+|+|++ ||..+.
T Consensus 121 ~~~P~v~v~~~~~~~~-~g~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 167 (239)
T 1i1c_A 121 PRGPQVYTMAPPKEEM-TQSQVSITCMVKGFYPPDIYTEWKM-NGQPQE 167 (239)
T ss_dssp CBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CcCCEEEEECCChHHh-cCCcEEEEEEEeeeECCCeEEEEEE-CCEECC
Confidence 4567766665554323 3557999999999 555 3899996 788764
No 298
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=97.69 E-value=5.1e-05 Score=49.27 Aligned_cols=31 Identities=29% Similarity=0.607 Sum_probs=27.8
Q ss_pred CCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
+|..+.+..|++++|.|.+.|.|.|.|.|++
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k 37 (245)
T 3nfj_J 7 WPATLVQPVGSPLSLECTVEGTSNPNLYWYR 37 (245)
T ss_dssp ECSEEEEETTCCEEEEEEEESCSSCEEEEEE
T ss_pred CCceEEecCCCCEEEEEEecCCCCceEEEEE
Confidence 4666778889999999999999999999998
No 299
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.69 E-value=0.0001 Score=46.87 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=30.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..|.+...|.. .+.+|+.++|.|.|.| |.|+++|.+ ||..+
T Consensus 107 ~~p~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 147 (201)
T 1nkr_A 107 EKPSLSAQPGP--TVLAGENVTLSCSSRS-SYDMYHLSR-EGEAH 147 (201)
T ss_dssp CCCEEEEESCS--EECTTCEEEEEEEESS-CCSEEEEEE-TTCSS
T ss_pred CCCceecCCCC--ccCCCCeEEEEEeCCC-CCceEEEEE-CCccc
Confidence 35677776543 3567888999999998 679999997 56544
No 300
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.69 E-value=4.4e-05 Score=51.29 Aligned_cols=40 Identities=20% Similarity=0.446 Sum_probs=30.6
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC-CCee
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS-DGTA 60 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~-dG~~ 60 (74)
|.+.+. +..+.+..|+.++|.|.+.|.| |.|+|++. +|..
T Consensus 163 ~~~~~~-p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~ 203 (282)
T 1qok_A 163 NVLTQS-PAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTS 203 (282)
T ss_dssp CCEEEE-CSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSC
T ss_pred eEEecC-CCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCC
Confidence 445555 4555677888999999999999 99999984 3443
No 301
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.69 E-value=1.2e-05 Score=51.58 Aligned_cols=43 Identities=21% Similarity=0.350 Sum_probs=28.9
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
+|.+...++.... ..|+.++|.|.|.|.|+| +|+|.+ ||.++.
T Consensus 135 ~p~v~~~~~~~~~-~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~l~ 179 (234)
T 2j6e_L 135 APSVTLFPPSSEE-LQANKATLVCLISDFFPGAVTVAWKA-DGAPVK 179 (234)
T ss_dssp CCCCCEECCCHHH-HTTSCCCEEECCCBCSSCCCEEEEEE-TTEECC
T ss_pred CCcccccCCChhH-hcCCceEEEEEEEEEcCCceEEEEEE-CCEECC
Confidence 4444444443322 246679999999996543 999997 788764
No 302
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.69 E-value=4.8e-05 Score=49.48 Aligned_cols=37 Identities=16% Similarity=0.331 Sum_probs=30.1
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccC-----CCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 57 (74)
.+++. |..+.+..|++++|.|.+.|.| .|.|.|++.+
T Consensus 3 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~ 44 (247)
T 1svz_A 3 LMTQT-PLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQK 44 (247)
T ss_dssp CEEEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred cEEec-CCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEEC
Confidence 34555 5666788899999999999999 7999998753
No 303
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.68 E-value=3.7e-05 Score=48.72 Aligned_cols=32 Identities=9% Similarity=0.275 Sum_probs=26.7
Q ss_pred CCcEEecCCCCeEEEEEEcccC---CCeEEEEeCC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSP---NPEIIWIRSD 57 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P---~P~I~W~~~d 57 (74)
|..+.+..|+.++|.|.+.|.| .|.|+|++.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~ 41 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEK 41 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeC
Confidence 4555678898999999999998 5899999753
No 304
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.68 E-value=2.9e-05 Score=51.26 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=29.7
Q ss_pred CCcEEecCCCCeEEEEEEcccCC-CeEEEEeCCCeeecC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDGTAVGD 63 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~-P~I~W~~~dG~~i~~ 63 (74)
+..+.+..|+.+.|.|.+.| |. |+|+|.+.||..+..
T Consensus 98 ~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~ 135 (290)
T 2o26_X 98 GLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPT 135 (290)
T ss_dssp CCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCT
T ss_pred ccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCC
Confidence 34455667888999999997 88 999997678987754
No 305
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.68 E-value=6.7e-05 Score=47.37 Aligned_cols=40 Identities=13% Similarity=0.297 Sum_probs=27.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
.|.+...|. . .+..|+.++|.|.|.|. .|+++|.+ ||..+
T Consensus 101 ~p~i~~~~~-~-~v~~G~~v~L~C~~~~~-~~~v~W~k-~g~~~ 140 (198)
T 1ugn_A 101 KPTLSAQPS-P-VVNSGGNVTLQCDSQVA-FDGFILCK-EGEDE 140 (198)
T ss_dssp CCEEEEESC-S-EEETTCCEEEEEECSSC-CSEEEEEE-C----
T ss_pred CCccccCCc-c-ccCCCCcEEEEEecCCC-CcEEEEEE-CCCcc
Confidence 456655543 2 35578889999999998 89999997 56554
No 306
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.67 E-value=6e-05 Score=45.94 Aligned_cols=37 Identities=22% Similarity=0.583 Sum_probs=30.2
Q ss_pred EEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeCCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRSDG 58 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~dG 58 (74)
+.+||..+.+..|++|+|.|.+.+. |.+.|.|++.++
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~ 48 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 48 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecC
Confidence 3445666778899999999999987 688999998654
No 307
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=97.67 E-value=4.1e-05 Score=47.61 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=26.6
Q ss_pred cEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 28 RIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 28 ~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
.+.+..|+.+.|.|.+.|.|.|.|+|+++++
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~ 34 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQ 34 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTC
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCc
Confidence 4456788899999999999999999998654
No 308
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=97.67 E-value=0.00012 Score=44.61 Aligned_cols=32 Identities=13% Similarity=0.460 Sum_probs=26.2
Q ss_pred EecCCCCeEEEEEE-cccCCCeEEEEeCCCeeec
Q psy11558 30 DFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 30 ~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~ 62 (74)
.+..|..+.|.|.+ .|.|.|+++|++ ||..+.
T Consensus 96 ~~~~g~~~~l~C~~~~~~p~~~~~W~~-~g~~~~ 128 (170)
T 3ry4_A 96 EFQEGETIMLRCHSWKDKPLVKVTFFQ-NGKSQK 128 (170)
T ss_dssp EECTTCCEEEEEEEGGGCCEEEEEEEE-TTEEEE
T ss_pred eeecCCeEEEEEECCCCCCCceEEEEE-CCeEcc
Confidence 35678889999999 567789999997 787764
No 309
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.67 E-value=2.1e-05 Score=51.94 Aligned_cols=35 Identities=14% Similarity=0.354 Sum_probs=28.3
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
+++. +..+.+..|+.++|.|.+.|.|.|.|+|++.
T Consensus 142 ~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 176 (257)
T 1f3r_B 142 LTQS-PSLLSASVGDRVTLSCKGSQNINNYLAWYQQ 176 (257)
T ss_dssp SCEE-TSEECCCTTCCEEEEEECSSCCBTCEEEEEE
T ss_pred EEcc-CCEEEEcCCCCEEEEEEECCcCCCcEEEEEE
Confidence 3444 4555577888999999999999999999983
No 310
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.67 E-value=2.9e-05 Score=49.82 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=30.3
Q ss_pred CCcEEecCC--CCeEEEEEEcccCCCeEEEEeC--CCeeecC
Q psy11558 26 PNRIDFSNT--TGAQVECTARGSPNPEIIWIRS--DGTAVGD 63 (74)
Q Consensus 26 p~~v~~~~g--~~v~L~C~A~G~P~P~I~W~~~--dG~~i~~ 63 (74)
|+.+.+.+| +.++|.|.|.| |.|.|+|.++ ||..+..
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~ 54 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPD 54 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCC
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccC
Confidence 356778888 89999999998 8899999876 6776543
No 311
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.67 E-value=0.00024 Score=48.16 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=28.8
Q ss_pred CCcEEecCCCCeEEEEEEcccC---CC-eEEEEeCCCeee
Q psy11558 26 PNRIDFSNTTGAQVECTARGSP---NP-EIIWIRSDGTAV 61 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P---~P-~I~W~~~dG~~i 61 (74)
+..+.+..|+.+.|.|.|.|.| .| .|+|.+ ||..+
T Consensus 235 ~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~-~g~~i 273 (329)
T 3oq3_B 235 DPKINVTIGEPANITCTAVSTSLLVDDVLIDWEN-PSGWI 273 (329)
T ss_dssp CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEEC-TTSCB
T ss_pred CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEE-CCeee
Confidence 4456678898999999999999 88 899996 66654
No 312
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=97.65 E-value=8.3e-05 Score=53.22 Aligned_cols=44 Identities=23% Similarity=0.430 Sum_probs=30.3
Q ss_pred ceEEEcCCCcEE-ecCCCCeEEEEEEcccCC----CeEEEEeCCCeeecC
Q psy11558 19 PIFIKEPPNRID-FSNTTGAQVECTARGSPN----PEIIWIRSDGTAVGD 63 (74)
Q Consensus 19 P~fv~~Pp~~v~-~~~g~~v~L~C~A~G~P~----P~I~W~~~dG~~i~~ 63 (74)
|.+...++.... +..|..+.|.|.|.|.|+ |+|+|++ ||.++..
T Consensus 318 P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k-~g~~l~~ 366 (523)
T 2rcj_C 318 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYV-DGVQVHN 366 (523)
T ss_pred ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEE-CCeEccC
Confidence 544333343322 557888999999999764 5999997 7777654
No 313
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.65 E-value=2.2e-05 Score=48.89 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=23.4
Q ss_pred ecCCCCeEEEEEE-cccCCCeEEEEeCC
Q psy11558 31 FSNTTGAQVECTA-RGSPNPEIIWIRSD 57 (74)
Q Consensus 31 ~~~g~~v~L~C~A-~G~P~P~I~W~~~d 57 (74)
...|+.+.|.|.| .|.|.|+|+|.+++
T Consensus 133 ~~~g~~v~l~C~~~~g~p~~~v~W~~~~ 160 (214)
T 3jz7_A 133 EEIGNDFKLKCEPKEGSLPLQFEWQKLS 160 (214)
T ss_dssp CBTTCCEEEEEECSBCCSSCEEEEEECS
T ss_pred eecCCcEEEEecCCCCCCCCEEEEEECC
Confidence 4567789999999 89999999999853
No 314
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.64 E-value=0.00011 Score=48.26 Aligned_cols=38 Identities=16% Similarity=0.394 Sum_probs=31.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCC-CeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN-PEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~-P~I~W~~~ 56 (74)
+|.+++.| ..+.+.+|++++|.|.+.|.|. |.|+|++.
T Consensus 149 ~~~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 187 (256)
T 3juy_B 149 EIVLTQAP-GTLSLSPGERATFSCRSSHSIRSRRVAWYQH 187 (256)
T ss_dssp CCCEEEEC-SEEEECTTSCEEEEEEESSCCTTCCEEEEEE
T ss_pred eeEEEecC-CeEEEeCCCCEEEEEEECCCcCCeeEEEEEE
Confidence 45677774 5556788999999999999997 99999873
No 315
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.64 E-value=0.00016 Score=46.09 Aligned_cols=30 Identities=20% Similarity=0.431 Sum_probs=23.8
Q ss_pred CCC-CeEEEEEEccc-CCCeEEEEeCCCeeecC
Q psy11558 33 NTT-GAQVECTARGS-PNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 33 ~g~-~v~L~C~A~G~-P~P~I~W~~~dG~~i~~ 63 (74)
+|. .++|.|.|.|. |.|+|+|.+ ||..+..
T Consensus 122 ~g~~~v~L~C~~~g~~p~p~i~W~~-~g~~l~~ 153 (193)
T 2if7_A 122 NMTCELHLTCSVEDADDNVSFRWEA-LGNTLSS 153 (193)
T ss_dssp CSSEEEEEEEEEESCCTTCEEEEEE-TTEEEES
T ss_pred CCCceEEEEEEEecCCCceEEEEEe-CCEEcCC
Confidence 444 69999999996 599999997 7776643
No 316
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.64 E-value=9.7e-05 Score=47.57 Aligned_cols=36 Identities=14% Similarity=0.329 Sum_probs=28.1
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCC--CeEEEEeC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRS 56 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~--P~I~W~~~ 56 (74)
.++..|+. ..+..|+.++|.|.+.|.|. |.|+|++.
T Consensus 121 ~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 121 VQLQQSGA-ELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp CEEEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEeCCCc-eEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 45555444 45778889999999999984 69999985
No 317
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.64 E-value=3.9e-05 Score=49.97 Aligned_cols=36 Identities=19% Similarity=0.452 Sum_probs=29.8
Q ss_pred cCCCcEEecCCCCeEEEEEE---cccCCCeEEEEeCCCe
Q psy11558 24 EPPNRIDFSNTTGAQVECTA---RGSPNPEIIWIRSDGT 59 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A---~G~P~P~I~W~~~dG~ 59 (74)
.+|..+.+..|+.+.|.|.| .|.|.|+|+|++.+|.
T Consensus 123 ~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~ 161 (268)
T 3mj6_A 123 EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGS 161 (268)
T ss_dssp CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTT
T ss_pred cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCC
Confidence 34556677889899999999 7889999999986654
No 318
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.63 E-value=8.1e-05 Score=52.37 Aligned_cols=45 Identities=22% Similarity=0.409 Sum_probs=32.0
Q ss_pred cceEEEcCCCcEE-ecCCCCeEEEEEEcccC----CCeEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRID-FSNTTGAQVECTARGSP----NPEIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~-~~~g~~v~L~C~A~G~P----~P~I~W~~~dG~~i~~ 63 (74)
+|.+...||.... +..|+.++|.|.|.|.| .|+|+|++ ||..+..
T Consensus 238 ~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k-~~~~~~~ 287 (444)
T 1igt_B 238 GPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFV-NNVEVHT 287 (444)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEE-TTEECSS
T ss_pred CceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEE-CCccccC
Confidence 5665444555433 46788899999999994 36999997 6666643
No 319
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.63 E-value=3e-05 Score=50.86 Aligned_cols=44 Identities=25% Similarity=0.461 Sum_probs=29.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeecC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVGD 63 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~~ 63 (74)
+|.+...++.... ..|+.++|.|.|.|. |.| +|+|.+ ||..+..
T Consensus 150 ~P~v~~~~~~~~~-~~g~~v~L~C~~~g~~p~~~~v~W~k-~g~~~~~ 195 (252)
T 3bkj_L 150 APTVSIFPPSSEQ-LTSGGASVVCFLNNFYPKDINVKWKI-DGSERQN 195 (252)
T ss_dssp CCEEEEECCCHHH-HHHTEEEEEEEEEEEBSSCCEEEEEE-TTEEECS
T ss_pred CcEEEEeCCChhh-cCCCcEEEEEEEeeEeCCCcEEEEEE-CCeecCC
Confidence 4555554443322 245679999999994 554 899997 7877643
No 320
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.62 E-value=0.0001 Score=52.78 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=34.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTA 60 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~ 60 (74)
.+|.|...|... .+..|+.+.|.|.+.|.|.|. |+|.+ ||..
T Consensus 210 ~~p~i~~~~~~~-~v~~G~~v~L~C~~~g~p~p~~i~W~~-~~~~ 252 (524)
T 2ec8_A 210 AVPVVSVSKASY-LLREGEEFTVTCTIKDVSSSVYSTWKR-ENSQ 252 (524)
T ss_dssp SCCEEECSCSEE-EEETTSCEEEEEEEEESSTTCEEEEEE-TTCS
T ss_pred CCCcEEecCCcc-eEEcCCcEEEEEEEecCCCcEEEEEEe-CCCC
Confidence 678888886544 677888999999999999998 99997 4544
No 321
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.62 E-value=5.8e-05 Score=48.94 Aligned_cols=28 Identities=18% Similarity=0.387 Sum_probs=24.8
Q ss_pred EEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 29 IDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 29 v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+.+..|++++|.|.+.|.| .|.|.|++.
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 41 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQ 41 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEecCCcEEEEEEeccccCCCceEEEEEe
Confidence 5678899999999999998 799999874
No 322
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.61 E-value=7.2e-05 Score=50.26 Aligned_cols=42 Identities=10% Similarity=0.181 Sum_probs=32.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..+|.|...|. .+ +..|+.++|.|.|.|. .|.++|.+ ||..+
T Consensus 22 ~~~P~i~~~p~-~~-v~~G~~v~L~C~~~~~-~~~~~W~k-~g~~~ 63 (316)
T 3vh8_G 22 QDKPFLSAWPS-AV-VPRGGHVTLRCHYRHR-FNNFMLYK-EDRIH 63 (316)
T ss_dssp --CCEEEEESC-SE-EETTSCEEEEEEBTTB-CCSEEEEE-SSCSS
T ss_pred CCCCEeeccCC-Cc-cCCCCCEEEEEEccCC-CceEEEEe-CCCcc
Confidence 56899999976 33 4578899999999998 79999997 55543
No 323
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.61 E-value=3.7e-05 Score=50.61 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=20.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
.|.+.+. |..+.+..|++++|.|.+.|.|.|.|.|++
T Consensus 2 s~~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 38 (259)
T 3omz_A 2 SSNLEGR-TKSVIRQTGSSAEITCDLAEGSTGYIHWYL 38 (259)
T ss_dssp ----------CEEEETTCCEEEECCC-----CEEEEEE
T ss_pred ccccccC-CceeEecCCCcEEEEEEEccCCCcEEEEEE
Confidence 3555555 455667889999999999999999999987
No 324
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=97.61 E-value=0.00025 Score=44.52 Aligned_cols=42 Identities=14% Similarity=0.275 Sum_probs=30.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
.+|.+...|.. .+..|+.++|.|.|.|.| |.++|.+ ||..+.
T Consensus 93 ~~p~i~~~p~~--~v~~G~~v~l~C~~~~~~-~~~~w~k-~g~~~~ 134 (184)
T 2gi7_A 93 AKPSLSAQPGP--AVSSGGDVTLQCQTRYGF-DQFALYK-EGDPAP 134 (184)
T ss_dssp CCCEEEEECCC--SSCCTTCEEEEEECSSCC-CEEEEEE-CCCCTT
T ss_pred CCCEEEeCCCc--eecCCCcEEEEEEcCCCC-cEEEEEE-CCCcCc
Confidence 45677777533 345788899999999865 7999997 666553
No 325
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=97.60 E-value=0.00011 Score=48.28 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=26.4
Q ss_pred ecCCCCeEEEEEEcc-cCCC--eEEEEeCCCeeec
Q psy11558 31 FSNTTGAQVECTARG-SPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G-~P~P--~I~W~~~dG~~i~ 62 (74)
+.+|+.++|.|.+.| .|.| +|+|++ ||..+.
T Consensus 15 v~~G~~v~l~C~~~g~~p~p~~~v~W~k-~~~~l~ 48 (265)
T 2oz4_A 15 LEVDTQGTVVCSLDGLFPVSEAQVHLAL-GDQRLN 48 (265)
T ss_dssp EETTEEEEEEEEEESCSCGGGCEEEEEE-TTEECC
T ss_pred EecCCCEEEEEEccCCCCCcceEEEEEe-CCEECC
Confidence 467888999999999 8988 999997 777654
No 326
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.59 E-value=5.8e-05 Score=52.40 Aligned_cols=45 Identities=24% Similarity=0.463 Sum_probs=32.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~~~ 64 (74)
+|.+...++..... .|+.+.|.|.|.| .|.| +|+|++ ||.++...
T Consensus 116 ~P~v~~~~~~~~~~-~g~~~~l~C~~~g~~p~~~~v~W~k-~g~~~~~~ 162 (438)
T 1qgc_4 116 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQNG 162 (438)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCEEEEEEE-TTEEECTT
T ss_pred CCEEEecCCChhhc-cCCceEEEEEEccccCCCcEEEEEE-CCEEcCCC
Confidence 56665544443323 3557999999998 7888 999997 88877543
No 327
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.59 E-value=3.9e-05 Score=49.96 Aligned_cols=45 Identities=24% Similarity=0.443 Sum_probs=30.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CC-CeEEEEeCCCeeecCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PN-PEIIWIRSDGTAVGDV 64 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i~~~ 64 (74)
+|.+...++..... .|..+.|.|.|.|. |+ ++|+|++ ||.++...
T Consensus 154 ~P~v~~~~~~~~~~-~g~~v~l~C~~~g~~p~~~~v~W~k-~g~~l~~~ 200 (254)
T 2c1o_A 154 APTVSIFPPSSEQL-TSGGASVVCFLNNFYPKDINVKWKI-DGSERQNG 200 (254)
T ss_dssp CCEEEEECCCHHHH-HTTEEEEEEEEEEEBSSCCEEEEEE-SSSEECTT
T ss_pred CCeeEeecCChhhc-cCCcEEEEEEEecccCCCcEEEEEE-CCCcccCc
Confidence 56666554443323 34579999999995 44 4699997 77776543
No 328
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=97.58 E-value=6.5e-05 Score=49.15 Aligned_cols=42 Identities=12% Similarity=0.183 Sum_probs=33.8
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCe-EEEEeCCCeeecC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPE-IIWIRSDGTAVGD 63 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~-I~W~~~dG~~i~~ 63 (74)
|+..| ..+.+..|+.+.|.|.+.|.|.|. |+|.+.||..+..
T Consensus 92 ~~~~~-~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~ 134 (289)
T 3ejj_X 92 WNLLA-QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR 134 (289)
T ss_dssp EEESC-SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT
T ss_pred eeccc-ceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC
Confidence 55654 556677888999999999998876 9998888887644
No 329
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.58 E-value=2.6e-05 Score=52.99 Aligned_cols=30 Identities=13% Similarity=0.338 Sum_probs=25.8
Q ss_pred ecCCCCeEEEEEEcccC-CCeEEEEeCCCeee
Q psy11558 31 FSNTTGAQVECTARGSP-NPEIIWIRSDGTAV 61 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P-~P~I~W~~~dG~~i 61 (74)
...|+.+.|.|.+.|.| .|+|+|++ ||..+
T Consensus 140 ~~~G~~v~L~C~~~g~p~~~~i~W~k-~~~~l 170 (329)
T 3oq3_B 140 THDKYGIDLYCGILYAKHYNNITWYK-NNQEL 170 (329)
T ss_dssp SSTTTCEEEECCCCSCCCCCEEEEEE-TTEEC
T ss_pred EeCCCcEEEEeccCCCCCCceEEEEE-CCccC
Confidence 34577899999999999 99999997 67766
No 330
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.58 E-value=6.5e-05 Score=51.43 Aligned_cols=45 Identities=20% Similarity=0.502 Sum_probs=30.4
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEccc-C-CCeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGS-P-NPEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P-~P~I~W~~~dG~~i~ 62 (74)
..+|.+...++...... |..+.|.|.|.|. | .++|+|.+ ||..+.
T Consensus 240 ~~~P~v~~~~~~~~~~~-~~~~~L~C~~~g~~P~~~~v~W~k-~g~~~~ 286 (344)
T 1za6_B 240 PREPQVYTLPPSRDELT-KNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 286 (344)
T ss_dssp CBCCEEEEECCCGGGGG-SSSEEEEEEEEEEBSSCCEEEEES-SSSCCC
T ss_pred CcCCEEEEeCCChHhcc-CCcEEEEEEEeeEECCCeEEEEEE-CCeECC
Confidence 34666655554433333 4459999999996 4 46999996 787664
No 331
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.57 E-value=7.1e-05 Score=48.46 Aligned_cols=40 Identities=20% Similarity=0.472 Sum_probs=26.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
|.+++. +..+ ..+|+.++|.|. |+|.|+|+|.+ ||..+..
T Consensus 115 ~~~~~~-p~~v-~~~G~~v~L~C~--g~p~p~i~W~k-~~~~l~~ 154 (204)
T 1sy6_A 115 GGITQT-PYKV-SISGTTVILTCP--QYPGSEILWQH-NDKNIGG 154 (204)
T ss_dssp ----CC-CCEE-EEETTEEEEECS--CCCSSCEEEEE-TTEEESC
T ss_pred cceecC-Ccee-eecCCcEEEEcC--CCCCCceEEEE-CCEECCC
Confidence 344444 3443 226778999999 89999999997 7777644
No 332
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=97.56 E-value=5e-05 Score=52.74 Aligned_cols=43 Identities=19% Similarity=0.458 Sum_probs=30.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeec
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~ 62 (74)
+|.+...++... ...|+.+.|.|.|.|. |.| +|+|.+ ||..+.
T Consensus 343 ~P~v~~~~~~~~-~~~g~~v~L~C~~~g~~P~~~~v~W~~-~g~~~~ 387 (438)
T 1qgc_4 343 PPSVYPLAPGSA-AAAASMVTLGCLVKGYFPEPVTVTWNS-GSLSSG 387 (438)
T ss_dssp CCEEEEECCCGG-GCCSSEEEEEEEEESCBSSCCEEEEGG-GTCCSS
T ss_pred CCeEEEcCcccc-cccCCcEEEEEEeccccCCCcEEEEec-CCCCCc
Confidence 455444444332 3467789999999998 999 999986 776654
No 333
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=97.56 E-value=9.3e-05 Score=48.53 Aligned_cols=45 Identities=31% Similarity=0.558 Sum_probs=28.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-C-CCeEEEEeCCCeeecC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-P-NPEIIWIRSDGTAVGD 63 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P-~P~I~W~~~dG~~i~~ 63 (74)
.+|.+...++....+..+ .+.|.|.|.|. | .++|+|++ ||.++..
T Consensus 117 ~~P~v~v~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k-~g~~l~~ 163 (231)
T 2w59_A 117 TPPLIYPFAPHPEELSLS-RVTLSCLVRGFRPRDIEIRWLR-DHRAVPA 163 (231)
T ss_dssp BCCEEEEECCCGGGGGSS-EEEEEEEEEEEBSSCCEEEEEE-TTEECCG
T ss_pred cCCEEEEeCCCHHHhccC-ceEEEEEEEeccCCCcEEEEEE-CCEECCC
Confidence 355444333332223334 59999999996 4 47999997 7887743
No 334
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=97.56 E-value=0.00022 Score=42.61 Aligned_cols=43 Identities=16% Similarity=0.287 Sum_probs=29.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~ 62 (74)
.+|.....|+.. ...|..++|.|.|.|- |.+ +|+|.+ ||+.+.
T Consensus 4 ~~P~V~v~~~~~--~~~~~~~~L~C~~~gFyP~~i~v~W~k-~g~~~~ 48 (100)
T 1k5n_B 4 RTPKIQVYSRHP--AENGKSNFLNCYVSGFHPSDIEVDLLK-NGERIE 48 (100)
T ss_dssp BCCEEEEEESSC--CCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred CCCEEEEEeCCc--ccCCCcEEEEEEEEeeECCceEEEEEE-CCEECC
Confidence 456555543333 2345569999999995 544 899996 888774
No 335
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.55 E-value=0.0001 Score=49.51 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=29.9
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
...+++|+ .+.+..|++++|.|.+.|.| .|.|.|++.+
T Consensus 27 ~~~~~~p~-~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~ 66 (282)
T 1qok_A 27 QVKLQQSG-AELVRSGTSVKLSCTASGFNIKDSYMHWLRQG 66 (282)
T ss_dssp CCEEEECC-CEEEETTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred eEEEECCC-CEEEeCCCeEEEEEeccCCCCCCceEEEEEeC
Confidence 34566655 45677898999999999996 7999999854
No 336
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=97.55 E-value=6.3e-05 Score=44.35 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=28.5
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccC----CCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P----~P~I~W~~~ 56 (74)
.++. |..+.+.+|++++|.|.+.|.| .+.|.|++.
T Consensus 4 v~q~-p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (111)
T 1j05_L 4 LTQS-PASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQ 42 (111)
T ss_dssp EEEE-CSEEECCTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred EEEe-CCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEe
Confidence 3444 5566788899999999999988 689999985
No 337
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.54 E-value=0.00011 Score=46.46 Aligned_cols=34 Identities=12% Similarity=0.199 Sum_probs=28.3
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccCCC-----eEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P~P-----~I~W~~~ 56 (74)
..|++.+....|+.+.|.|.+.|.|.+ .|+|+++
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~ 43 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEME 43 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEET
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEEC
Confidence 346677778889999999999999954 9999985
No 338
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.69 E-value=1.2e-05 Score=47.73 Aligned_cols=32 Identities=16% Similarity=0.274 Sum_probs=27.4
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
|..+.+.+|++++|.|.+.+.|.+.|.|++.+
T Consensus 6 p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~ 37 (110)
T 1u3h_A 6 PQSLTVWEGETAILNCSYENSAFDYFPWYQQF 37 (110)
Confidence 45566788999999999999999999999753
No 339
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=97.54 E-value=7e-05 Score=47.79 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=27.5
Q ss_pred ccceEEEcCCCcEEecCCCCe-EEEEEEc-ccCCCeEEEEeC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGA-QVECTAR-GSPNPEIIWIRS 56 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v-~L~C~A~-G~P~P~I~W~~~ 56 (74)
.+|.+...+.... ..|..+ .|.|.|. |.|.|+|+|+++
T Consensus 115 ~~P~~~~~~~~~~--~~g~~~~~l~C~~~~g~P~p~v~W~k~ 154 (221)
T 3eow_R 115 AKPQNTAEVQKVQ--LTGEPVPMARCVSTGGRPPAQITWHSD 154 (221)
T ss_dssp CCCEEEEEEECCC--CCSSSCCEEEEEEESCSSCCCEEEECS
T ss_pred ECCCceeecCCcc--cCCceEEEEEEECCCccCCCeeEEEeC
Confidence 3666665544433 456667 5999988 999999999863
No 340
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=97.54 E-value=6.7e-05 Score=50.73 Aligned_cols=40 Identities=13% Similarity=0.162 Sum_probs=33.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCC-----------CeEEEEeCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN-----------PEIIWIRSD 57 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~-----------P~I~W~~~d 57 (74)
-+.|...+...+.+.+|+.+.|.|.+.|.|. |+|+|++++
T Consensus 6 c~~~~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~ 56 (349)
T 4dep_C 6 CDDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTR 56 (349)
T ss_dssp CEEEEECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEE
T ss_pred ccccccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECC
Confidence 4567777778888889999999999998775 999999854
No 341
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.54 E-value=0.00011 Score=47.25 Aligned_cols=34 Identities=12% Similarity=0.337 Sum_probs=28.5
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
+++. |..+.+.+|++++|.|. .|.|.|.|+|++.
T Consensus 3 v~q~-p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~ 36 (238)
T 2p1y_A 3 VTQS-PRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQ 36 (238)
T ss_dssp EEEE-CSEEEEETTCCEEEEEE-ECSCCSEEEEEEE
T ss_pred ceEC-ccceEEeCCCEEEEEee-cCCCCccEEEEEE
Confidence 4555 56667888999999999 8999999999984
No 342
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=97.53 E-value=8.7e-05 Score=52.49 Aligned_cols=43 Identities=26% Similarity=0.520 Sum_probs=30.5
Q ss_pred cceE-EEcCCCcEE-ecCCCCeEEEEEEcccCCC----eEEEEeCCCeeec
Q psy11558 18 GPIF-IKEPPNRID-FSNTTGAQVECTARGSPNP----EIIWIRSDGTAVG 62 (74)
Q Consensus 18 ~P~f-v~~Pp~~v~-~~~g~~v~L~C~A~G~P~P----~I~W~~~dG~~i~ 62 (74)
+|.+ +. ||.... +..|+.+.|.|.|.|.|++ +|+|++ ||.++.
T Consensus 247 ~p~v~~~-~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k-~~~~~~ 295 (457)
T 1hzh_H 247 GPSVFLF-PPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVH 295 (457)
T ss_dssp SCEEEEE-CCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEE-TTEEEC
T ss_pred CceEEeE-CcCchhhcccCCceEEEEEEEcccCCCCceEEEEEe-CCcccc
Confidence 5654 55 444322 4568889999999999654 999997 676654
No 343
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=97.51 E-value=0.0002 Score=48.34 Aligned_cols=41 Identities=22% Similarity=0.330 Sum_probs=28.2
Q ss_pred EEcCCCcEEec-----CCCCeEEEEEEccc-CC----CeEEEEeCCCeeecCC
Q psy11558 22 IKEPPNRIDFS-----NTTGAQVECTARGS-PN----PEIIWIRSDGTAVGDV 64 (74)
Q Consensus 22 v~~Pp~~v~~~-----~g~~v~L~C~A~G~-P~----P~I~W~~~dG~~i~~~ 64 (74)
+..||..+... .|..+ |.|.|.|. |. |+|+|++ ||.+|...
T Consensus 93 V~~~P~~~~i~~~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk-~~~~L~~~ 143 (210)
T 1gsm_A 93 VYAFPNQLTVSPAALVPGDPE-VACTAHKVTPVDPNALSFSLLV-GGQELEGA 143 (210)
T ss_dssp EEBCCSEEEEESSSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEE-TTEECTTC
T ss_pred EEecCCCcEEccceEEeCCce-EEEEeCCCCCCCCCCcEEEEEE-CCEEcccc
Confidence 34445444433 45567 99999996 74 5999996 88887543
No 344
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.51 E-value=0.00017 Score=47.17 Aligned_cols=38 Identities=16% Similarity=0.349 Sum_probs=30.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC----eEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP----EIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P----~I~W~~~ 56 (74)
.|.+++.| ..+.+.+|++++|.|.+.|.|.| .|+|++.
T Consensus 133 ~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 133 ELVMTQTP-ASLAVSLGQRATISCRASENVDRYGNSFMHWYQQ 174 (253)
T ss_dssp -CCEEEEC-SEEEECTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred cceEECcC-CeEEEeCCCCEEEEEEecCccccCCCcEEEEEEE
Confidence 56777774 45567889999999999999998 9999974
No 345
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.51 E-value=0.00013 Score=47.38 Aligned_cols=38 Identities=8% Similarity=0.332 Sum_probs=28.9
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
+.++..|+... +..|+.++|.|.+.|.| .|.|+|++.+
T Consensus 128 ~~~~~~~~~~~-v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 167 (247)
T 1svz_A 128 EVQLQQSGPEL-KKPGETVKISCKATNYAFTDYSMHWVKQA 167 (247)
T ss_dssp CCEEEECCCEE-ECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred ceEEeCCCcee-ecCCCcEEEEEEEcCcccCCcEEEEEEeC
Confidence 34555555544 77888999999999986 6799999853
No 346
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.51 E-value=0.00016 Score=43.22 Aligned_cols=35 Identities=14% Similarity=0.351 Sum_probs=28.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+++. |..+...+|++|+|.|.+++.+ .+.|.|++.
T Consensus 3 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (113)
T 1sq2_N 3 VDQT-PRSVTKETGESLTINCVLRDASYALGSTCWYRK 39 (113)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEECSCSSCCCCEEEEEE
T ss_pred eEeC-CccEEEecCCCEEEEEEECCCcCCCCEEEEEEe
Confidence 3454 4556788899999999999987 789999985
No 347
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=97.50 E-value=0.00024 Score=42.24 Aligned_cols=44 Identities=16% Similarity=0.246 Sum_probs=29.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCC-----eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-----~I~W~~~dG~~i~ 62 (74)
..+|.+...|... +.+|+.++|.|.+.+.|.+ +++|.+ ||..+.
T Consensus 6 ~~kP~l~~~p~~~--v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k-~g~~l~ 54 (108)
T 4hwn_A 6 FPAPILRAVPSAE--PQAGSPMTLSCQTKLPLQRSAARLLFSFYK-DGRIVQ 54 (108)
T ss_dssp CCCCEEEEESCSS--CBTTCCEEEEEEC---------CCEEEEEE-TTEEEE
T ss_pred CCCCEEEecCCCc--CCCCCcEEEEEcccCCCCCcCcceEEEEEE-CCcCcc
Confidence 4678888887543 4578889999999988776 499997 777664
No 348
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=97.50 E-value=8.9e-05 Score=47.50 Aligned_cols=34 Identities=18% Similarity=0.420 Sum_probs=27.8
Q ss_pred CCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCCe
Q psy11558 26 PNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGT 59 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~ 59 (74)
.+...+..|.++.|+|.|.| .|+|+|+|.+-+|.
T Consensus 21 ~S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~ 55 (122)
T 1xau_A 21 NSKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGT 55 (122)
T ss_dssp TEEEEECTTSCEEEEEEEECSSSCCCEEEEEECSS
T ss_pred eccEEEecCCeEEEEeEecCCCCCCcEEEEecCCe
Confidence 34455678889999999966 78999999997773
No 349
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.50 E-value=5.2e-05 Score=48.08 Aligned_cols=34 Identities=18% Similarity=0.453 Sum_probs=28.4
Q ss_pred CCCcEEecCCCCeEEEEEEcccCC-CeEEEEeCCC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDG 58 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~-P~I~W~~~dG 58 (74)
.|..+.+..|+.+.|.|.+.|.|. |.|+|.+.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~ 40 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDR 40 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECT
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCC
Confidence 356667788989999999999995 9999997543
No 350
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.50 E-value=0.00011 Score=48.08 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=28.2
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
.++..|+... +.+|++++|.|.+.|.| .|.|+|++.
T Consensus 124 ~~~~~~~~~~-v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 124 IQLQESGPSL-VKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp CEEEEECCSE-ECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred eeeecCCcce-ecCCCeEEEEEEEEccccCCcceeeEee
Confidence 3555555543 67888999999999987 589999985
No 351
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.50 E-value=0.00016 Score=45.57 Aligned_cols=40 Identities=10% Similarity=0.291 Sum_probs=29.5
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
+|.+...| +. .+.+|+.++|.|.|.| |.|+++|.+ ||..+
T Consensus 99 ~p~i~~~p-~~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 138 (188)
T 1oll_A 99 TPTLSVHP-GP-EVISGEKVTFYCRLDT-ATSMFLLLK-EGRSS 138 (188)
T ss_dssp CCEEEEES-CS-EEETTCEEEEEEECSS-SCSEEEEEE-ESSSC
T ss_pred CCeEEECC-CC-ccccCCEEEEEEEcCC-CCCEEEEEE-CCccc
Confidence 57777665 33 2467888999999988 568999997 56544
No 352
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.49 E-value=0.00019 Score=46.97 Aligned_cols=38 Identities=16% Similarity=0.387 Sum_probs=30.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCC-eEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNP-EIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-~I~W~~~ 56 (74)
.|.+++. +..+.+.+|+.++|.|.+.|.|.| .|.|++.
T Consensus 141 ~~~~~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 179 (257)
T 3gkz_A 141 QIVLTQS-PAIMSASPGEKVTLTCSASSSVSSSHLYWYQQ 179 (257)
T ss_dssp CCCEECS-CSEEEECTTCCEEEEEEESSCCCGGGEEEEEE
T ss_pred ceEEEcC-CceEEEeCCCcEEEEEEEccCccceEEEEEEE
Confidence 3556665 455667889999999999999998 9999973
No 353
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=97.49 E-value=0.0002 Score=45.10 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=30.4
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
.+|.+...|.. .+..|+.++|.|.|.| |.+.+.|.+ ||..+
T Consensus 99 ~~p~~~~~~~~--~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~ 139 (196)
T 3p2t_A 99 SKPTLSALPSP--LVTSGKSVTLLCQSRS-PMDTFLLCK-ERAAH 139 (196)
T ss_dssp CCCEEEEESCS--EECTTCCEEEEEEEEE-EEEEEEEEE-TTCCC
T ss_pred CCCEEEeCCcc--eecCCCeEEEEEecCC-CCCEEEEEe-CCCcc
Confidence 35667666543 3567888999999999 557999997 66544
No 354
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.49 E-value=4.9e-05 Score=48.24 Aligned_cols=27 Identities=19% Similarity=0.582 Sum_probs=23.6
Q ss_pred CCCCeEEEEEEcccCCCeEEEEeCCCeeecC
Q psy11558 33 NTTGAQVECTARGSPNPEIIWIRSDGTAVGD 63 (74)
Q Consensus 33 ~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~ 63 (74)
.|..+.|.|.| |.|+|+|++ ||.++..
T Consensus 121 ~G~~v~l~C~~---p~p~i~W~k-~g~~i~~ 147 (186)
T 1jbj_A 121 GDGSVLLTCGL---TDKTIKWLK-DGSIISP 147 (186)
T ss_dssp SSCEEEEECSS---SCSCEEEEE-TTEECCC
T ss_pred CCCeEEEEeeC---CCCeEEEEE-CCEECcc
Confidence 77789999999 999999996 8888753
No 355
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=97.48 E-value=0.0001 Score=43.74 Aligned_cols=35 Identities=17% Similarity=0.415 Sum_probs=28.4
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC------CCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP------NPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P------~P~I~W~~~d 57 (74)
++. |..+...+|++++|.|.++|.| .+.|.|++.+
T Consensus 5 ~q~-p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~ 45 (114)
T 1eeq_A 5 TQS-PDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQK 45 (114)
T ss_dssp EEE-CSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEEC
T ss_pred Eec-CCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEEC
Confidence 444 5666788999999999999988 4899999853
No 356
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=97.48 E-value=0.00017 Score=42.66 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=32.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..|.+...|... +..|+.|+|.|.+.+.+ +.+.|++ ||..+
T Consensus 4 ~kP~i~~~p~~~--v~~G~~VtL~C~~~~~~-~~~~w~k-~g~~~ 44 (105)
T 2vsd_A 4 PQPSLSLHPSQG--VSLGDTVTLRCHLPRMA-AWVQLWL-NGTLR 44 (105)
T ss_dssp CCCEEEEESCSS--CCTTCEEEEEEECCSSC-EEEEEEE-TTEEE
T ss_pred CCCEEEeCCCCC--cCcCCCEEEEEEcCCCC-cEEEEEE-CCccc
Confidence 568888887653 56788899999999864 7899997 66554
No 357
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.48 E-value=0.00011 Score=46.24 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=28.2
Q ss_pred EcCCCcEEecCCCCeEEEEEEccc-------CCCeEEEEeCC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGS-------PNPEIIWIRSD 57 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~-------P~P~I~W~~~d 57 (74)
.+.|..+...+|++++|.|.+.+. |.|.|.|++.+
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~ 45 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDG 45 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETT
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecC
Confidence 334566778889999999999975 78999999854
No 358
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=97.48 E-value=0.00018 Score=46.50 Aligned_cols=28 Identities=18% Similarity=0.500 Sum_probs=23.1
Q ss_pred cCCCCeEEEEEEccc-CCC-eEEEEeCCCee
Q psy11558 32 SNTTGAQVECTARGS-PNP-EIIWIRSDGTA 60 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~ 60 (74)
..|..+.|.|.|.|. |.| +|+|.+ ||..
T Consensus 141 ~~g~~v~L~C~~~g~~P~p~~v~W~~-~~~~ 170 (225)
T 1op3_H 141 TSGGTAALGCLVKDYFPEPVTVSWNS-GALT 170 (225)
T ss_dssp CCCCEEEEEEEEEEEBSSCCEEECCT-TSCC
T ss_pred cCCCcEEEEEEEEeEECCCeEEEEec-CCCc
Confidence 457789999999997 888 999986 5654
No 359
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=97.48 E-value=0.0002 Score=45.98 Aligned_cols=39 Identities=18% Similarity=0.388 Sum_probs=29.8
Q ss_pred EEcCCCcEEecCCCCeEEEEEE-cccCCCeEEEEeCCCeeec
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~ 62 (74)
...|+.. .+.+|+.+.|.|.+ .|.|.|+++|++ ||..+.
T Consensus 86 ~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~v~W~~-~g~~~~ 125 (262)
T 3rjd_A 86 LLQVSSR-VFTEGEPLALRCHAWKDKLVYNVLYYR-NGKAFK 125 (262)
T ss_dssp EEEESCS-EEETTSCEEEEEEEGGGCCCEEEEEEE-TTEEEE
T ss_pred EecCCCe-EEecCCeEEEEEEccCCCCCceEEEEE-CCcccc
Confidence 3343333 35678889999999 899999999996 777764
No 360
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.48 E-value=6.8e-05 Score=49.13 Aligned_cols=41 Identities=12% Similarity=0.196 Sum_probs=31.2
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCC--CeEEEEeCCCeeecC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSDGTAVGD 63 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~--P~I~W~~~dG~~i~~ 63 (74)
|... +..+.+..|+.+.|.|.+.| |. |+|+|.+++|..+..
T Consensus 92 ~~~~-~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~ 134 (292)
T 4dkd_C 92 WNVL-AQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMR 134 (292)
T ss_dssp EEES-CSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCS
T ss_pred cccc-CCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcccc
Confidence 4444 34556778889999999999 65 889999877776543
No 361
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=97.47 E-value=0.00035 Score=42.31 Aligned_cols=38 Identities=24% Similarity=0.269 Sum_probs=29.3
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCC---CeEEEEeCCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIWIRSDG 58 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~---P~I~W~~~dG 58 (74)
.+..|+..+....|++++|.|.+.+.|. +.|.|++.+.
T Consensus 8 ~V~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~ 48 (139)
T 1pko_A 8 RVIGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPF 48 (139)
T ss_dssp EEECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--
T ss_pred EEECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCC
Confidence 3455676777888999999999998764 8999998653
No 362
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=97.47 E-value=0.00011 Score=47.34 Aligned_cols=29 Identities=17% Similarity=0.596 Sum_probs=23.9
Q ss_pred cCCCCeEEEEEEccc-CCC-eEEEEeCCCeee
Q psy11558 32 SNTTGAQVECTARGS-PNP-EIIWIRSDGTAV 61 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i 61 (74)
..|..+.|.|.|.|. |.| +|+|.+ ||..+
T Consensus 135 ~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~~ 165 (215)
T 1c5d_H 135 TTSSTVTLGCLVKGYFPEPVTVTWNS-GALSS 165 (215)
T ss_dssp CCCSSEEEEEEEEEEBSSCCEEEEGG-GTTCC
T ss_pred ccCCcEEEEEEEeeeEcCCcEEEEcc-CCccC
Confidence 467789999999998 999 999986 56543
No 363
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.47 E-value=0.00013 Score=48.66 Aligned_cols=38 Identities=11% Similarity=0.337 Sum_probs=31.2
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC------CCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP------NPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P------~P~I~W~~~ 56 (74)
.+.+++. |..+.+.+|++++|.|.+.|.| .|.|.|++.
T Consensus 5 ~~~v~q~-p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 48 (264)
T 2gjj_A 5 DIVLTQT-PSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQ 48 (264)
T ss_dssp CCCEEEE-CSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred ccceEec-CCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEE
Confidence 4566676 4556678899999999999999 799999985
No 364
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=97.46 E-value=5.8e-05 Score=48.70 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=24.7
Q ss_pred ecCCCCeEEEEEEcccCC---CeEEEEeCCCeeec
Q psy11558 31 FSNTTGAQVECTARGSPN---PEIIWIRSDGTAVG 62 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P~---P~I~W~~~dG~~i~ 62 (74)
+..|+.++|.|.|.|.|+ |+|+|++ ||..+.
T Consensus 103 ~~~G~~~~L~C~~~~~~p~~~~~i~W~k-~~~~l~ 136 (202)
T 1vca_A 103 LEAGKPITVKCSVADVYPFDRLEIDLLK-GDHLMK 136 (202)
T ss_dssp EETTSCEEEEEEEEEEBSGGGEEEEEEE-TTEEEE
T ss_pred EcCCCCEEEEEEECCcCCCCCeEEEEEe-CCeECc
Confidence 457888999999999754 4899997 777664
No 365
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.45 E-value=8.5e-05 Score=52.21 Aligned_cols=44 Identities=18% Similarity=0.333 Sum_probs=29.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
.+|.+...|+..... .|..++|.|.|.|.++| +|+|++ ||.++.
T Consensus 335 ~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k-~g~~l~ 380 (434)
T 1igy_B 335 RAPQVYTIPPPKEQM-AKDKVSLTCMITDFFPEDITVEWQS-DGQAPE 380 (434)
T ss_dssp BCCCCEEECCCSSSS-SSSEEEEEEEEEEEBCSCEEEEEEE-TTSCCS
T ss_pred cCCEEEEECCCHHHh-cCCcEEEEEEEEeeECCCeEEEEEE-CCEecC
Confidence 466666555443222 34469999999996433 899997 777664
No 366
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.45 E-value=0.00016 Score=45.47 Aligned_cols=27 Identities=19% Similarity=0.503 Sum_probs=22.5
Q ss_pred ecCCCCeEEEEEEccc----CCCeEEEEeCC
Q psy11558 31 FSNTTGAQVECTARGS----PNPEIIWIRSD 57 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~----P~P~I~W~~~d 57 (74)
+.+|..+.|.|.|.|. |.|+|+|.+++
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~ 165 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNA 165 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESST
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCC
Confidence 3467789999999985 99999999743
No 367
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.45 E-value=9.7e-05 Score=49.31 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=29.0
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
.++..| ..+.+.+|++++|.|.+.|.| .|.|+|++.+
T Consensus 136 ~~~~~p-~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~ 174 (276)
T 3auv_A 136 VQLVES-GGGLVQPGGSLRLSCAASGFTISDYWIHWVRQA 174 (276)
T ss_dssp CEEEEE-CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred eEEECC-CceEecCCCeEEEEEEecCccCCCCEEEEEEcC
Confidence 445554 445677888999999999988 6999999853
No 368
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=97.44 E-value=5.7e-05 Score=51.29 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=27.0
Q ss_pred EEecCCCCeEEEEEEccc-----CCCeEEEEeCCCeee
Q psy11558 29 IDFSNTTGAQVECTARGS-----PNPEIIWIRSDGTAV 61 (74)
Q Consensus 29 v~~~~g~~v~L~C~A~G~-----P~P~I~W~~~dG~~i 61 (74)
..+..|+.++|.|.|.|+ |.|+|.|++ ||..|
T Consensus 10 ~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~-~g~~l 46 (313)
T 2d9q_B 10 PIVHLGDPITASCIIKQNCSHLDPEPQILWRL-GAELQ 46 (313)
T ss_dssp SEECTTCCEEEEECCCTTSCSSCSCSCCEEES-SSCBC
T ss_pred cEEcCCCCEEEEEEECCCCCCCCcccceEEEe-CCEEC
Confidence 346788899999999998 789999996 77766
No 369
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=97.44 E-value=0.00015 Score=45.89 Aligned_cols=28 Identities=11% Similarity=0.219 Sum_probs=23.6
Q ss_pred eEEEEEEcccCCCeEEEEeCCCeeecCCC
Q psy11558 37 AQVECTARGSPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 37 v~L~C~A~G~P~P~I~W~~~dG~~i~~~~ 65 (74)
..|.|.|.|.|.|+|+|.+ ||.++....
T Consensus 108 ~~L~C~~~~~p~p~i~W~~-~~~~l~~~~ 135 (171)
T 1ccz_A 108 ATLTCEVLEGTDVELKLYQ-GKEHLRSLR 135 (171)
T ss_dssp TEEEEECSSCSSCEEEEEE-TTEEEEEES
T ss_pred cEEEEEeCCCCCcEEEEEE-CCEECcCCc
Confidence 5899999999999999996 788775433
No 370
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=97.43 E-value=0.0003 Score=45.47 Aligned_cols=26 Identities=19% Similarity=0.497 Sum_probs=23.0
Q ss_pred CCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 35 TGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 35 ~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..++|.|.|.|.|.|+|+|.+ ||.++
T Consensus 116 ~~v~L~C~~~~~p~~~~~W~~-~g~~l 141 (182)
T 1hnf_A 116 INTTLTCEVMNGTDPELNLYQ-DGKHL 141 (182)
T ss_dssp TTTEEEEECSSCSSCEEEEEE-SSCEE
T ss_pred CcEEEEeEccCCCCCEEEEEE-CCEEC
Confidence 369999999999999999997 67766
No 371
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=97.43 E-value=0.00011 Score=47.61 Aligned_cols=27 Identities=26% Similarity=0.688 Sum_probs=23.1
Q ss_pred cCCCCeEEEEEEcccCCCeEEEEeCCCeeec
Q psy11558 32 SNTTGAQVECTARGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~ 62 (74)
.+|+.++|.|.| |.|+|+|++ ||.++.
T Consensus 16 ~~G~~v~L~C~~---p~~~i~W~k-~g~~l~ 42 (204)
T 1sy6_A 16 QEDGSVLLTCDA---EAKNITWFK-DGKMIG 42 (204)
T ss_dssp CSSSEEEEEECS---CSSEEEEEE-TTEEEE
T ss_pred cCCCeEEEEEcC---CCCEEEEEE-CCEECC
Confidence 467789999999 899999997 788774
No 372
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=97.43 E-value=0.00014 Score=47.22 Aligned_cols=42 Identities=17% Similarity=0.373 Sum_probs=27.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTA 60 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~ 60 (74)
..|.+...+++.. ...|..+.|.|.|.|. |.| +|+|.+ ||..
T Consensus 129 ~~P~i~~~~~~~~-~~~g~~~~l~C~~~g~~P~p~~v~W~~-~~~~ 172 (228)
T 3bae_H 129 TAPSVYPLAPVCG-DTTGSSVTLGCLVKGYFPEPVTLTWNS-GSLS 172 (228)
T ss_dssp BCCEEEEECC------CCSEEEEEEEEEEEBSSCCEEEEGG-GTCC
T ss_pred CCCEEEEeccccc-ccCCCCEEEEEEEccEeCCCEEEEEee-CCcc
Confidence 3455554444432 3467789999999997 988 999986 5543
No 373
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=97.42 E-value=0.00017 Score=42.22 Aligned_cols=35 Identities=11% Similarity=0.244 Sum_probs=28.9
Q ss_pred CCCcEEecCCCCeEEEEEE-cccCCCeEEEEeCCCe
Q psy11558 25 PPNRIDFSNTTGAQVECTA-RGSPNPEIIWIRSDGT 59 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A-~G~P~P~I~W~~~dG~ 59 (74)
++..+....|++++|.|.+ .+.|.+.|.|++.+|.
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~ 44 (110)
T 2ptt_A 9 SIPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQ 44 (110)
T ss_dssp CCCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTB
T ss_pred CCCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCc
Confidence 3455667789999999999 8889999999996565
No 374
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.42 E-value=0.00017 Score=47.81 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=32.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccC-----CCeEEEEeCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 57 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 57 (74)
..+.+++.| ..+.+.+|++++|.|.+.|.| .|.|.|++.+
T Consensus 14 ~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 58 (268)
T 1x9q_A 14 SDVVMTQTP-LSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQK 58 (268)
T ss_dssp CCCCEEEEC-SEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred ccceEEeeC-CeEEecCCCCEEEEeEecCCcccccCCceEEEEEEC
Confidence 456677764 555678899999999999998 5999999753
No 375
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=97.42 E-value=6.6e-05 Score=49.19 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=25.1
Q ss_pred cEEecCCCCeEEEE---EEcccCCCeEEEEeCCC
Q psy11558 28 RIDFSNTTGAQVEC---TARGSPNPEIIWIRSDG 58 (74)
Q Consensus 28 ~v~~~~g~~v~L~C---~A~G~P~P~I~W~~~dG 58 (74)
.++...|+.++|.| .+.|.|.|+|+|++ +|
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k-~g 34 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFK-LG 34 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEE-EE
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEE-cC
Confidence 45567888999999 57899999999997 45
No 376
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.42 E-value=8.7e-05 Score=48.01 Aligned_cols=42 Identities=12% Similarity=0.280 Sum_probs=29.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CC--CeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PN--PEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~--P~I~W~~~dG~~i 61 (74)
.+|.+...+... ...|..++|.|.|.|. |. |+|+|.+ ||..+
T Consensus 122 ~~P~v~~~~~~~--~~~g~~v~L~C~~~g~~P~~~~~v~W~~-~~~~~ 166 (220)
T 2fbj_H 122 RNPTIYPLTLPP--ALSSDPVIIGCLIHDYFPSGTMNVTWGK-SGKDI 166 (220)
T ss_dssp BCCEEEEECCCS--SSCCSSEEEEEEEEEEBSCCCEEEEESC-CCSSC
T ss_pred CCCEEEEeeccc--ccCCCcEEEEEEEEeEECCCcEEEEEec-CCEec
Confidence 345554443222 3467789999999998 87 8999986 56544
No 377
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=97.41 E-value=0.00035 Score=41.64 Aligned_cols=43 Identities=16% Similarity=0.208 Sum_probs=28.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~ 62 (74)
.+|.....|... ...|..++|.|.|.|- |+. +|+|.+ ||+.+.
T Consensus 3 ~~P~V~v~~~~~--~~~~~~~~L~C~~~gfyP~~i~v~W~k-~g~~~~ 47 (99)
T 1lk2_B 3 KTPQIQVYSRHP--PENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 47 (99)
T ss_dssp BCCEEEEEESSC--CCTTSCEEEEEEEEEEBSSCCEEEEEE-TTEECT
T ss_pred cCCEEEEEcCCc--ccCCCCEEEEEEEEEEECCCcEEEEEE-CCEECC
Confidence 356555543332 2345579999999996 433 899996 888774
No 378
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.41 E-value=0.00031 Score=46.01 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=29.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 56 (74)
.|.|... +..+.+.+|++++|.|.+.|. |.|.|.|++.
T Consensus 6 ~~~~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 45 (256)
T 3juy_B 6 HQVQLVQ-SGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQ 45 (256)
T ss_dssp -CCEEEE-CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ceEEEEe-cCCceecCCCeEEEEEEeecccccCceEEEEEE
Confidence 3444444 667778899999999999994 7899999973
No 379
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.41 E-value=0.00016 Score=48.73 Aligned_cols=45 Identities=24% Similarity=0.420 Sum_probs=29.8
Q ss_pred ccceEEEcCCCcEE-ecCCCCeEEEEEEcccC----CCeEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRID-FSNTTGAQVECTARGSP----NPEIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~-~~~g~~v~L~C~A~G~P----~P~I~W~~~dG~~i~ 62 (74)
.+|.....||+... +..|..+.|.|.|.|.+ ..+|+|++ ||..+.
T Consensus 21 ~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k-~g~~l~ 70 (240)
T 4acp_A 21 GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV-DGVEVH 70 (240)
T ss_dssp --CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEE-TTEEEC
T ss_pred CCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEE-CCcccC
Confidence 34544444455544 44577899999999974 33899997 787764
No 380
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.41 E-value=0.00074 Score=39.76 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=27.8
Q ss_pred CCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
+|..+...+|++++|.|.+.+.+.+.|.|++.+
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~ 38 (112)
T 2z35_A 6 TGGQVALSEEDFLTIHCNYSASGYPALFWYVQY 38 (112)
T ss_dssp SCSEEEEETTCCEEECCEEECSSCCEEEEEEEC
T ss_pred CCCcEEEcCCCCEEEEEEECCCCCCeEEEEEEC
Confidence 355667788999999999999889999999753
No 381
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.41 E-value=0.00017 Score=46.73 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=24.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCe
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGT 59 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~ 59 (74)
+|.+...|... ...|..+.|.|.|.| .|.| +|+|.+ ||.
T Consensus 119 ~P~v~~~~~~~--~~~~~~~~L~C~~~g~~P~pi~v~W~k-~g~ 159 (248)
T 3pv7_A 119 SPASRLLLDQV--GMKENEDKYMCESSGFYPEAINITWEK-QTQ 159 (248)
T ss_dssp CCEEEEECC----------CEEEEEEEEEBSSCCEEEEEE-ECS
T ss_pred CCceEEecCCc--cccCCCcEEEEEEccEECCCeEEEEEE-CCc
Confidence 56666554433 224556889999999 8999 999997 553
No 382
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.41 E-value=0.00012 Score=47.67 Aligned_cols=29 Identities=17% Similarity=0.583 Sum_probs=21.1
Q ss_pred cCCCCeEEEEEEccc-CCC-eEEEEeCCCeee
Q psy11558 32 SNTTGAQVECTARGS-PNP-EIIWIRSDGTAV 61 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i 61 (74)
..|..++|.|.|.|. |.| +|+|.+ ||..+
T Consensus 134 ~~g~~v~L~C~~~g~~P~p~~v~W~~-~g~~~ 164 (227)
T 1mju_H 134 TSGSSVTLGCLVKGYFPEPVTLTWNS-GSLSS 164 (227)
T ss_dssp ----CEEEEEEEEEEBSSCCEEEEGG-GTBCT
T ss_pred cCCCcEEEEEEeecEeCCCeEEEEec-CCCcC
Confidence 457789999999996 888 999986 56543
No 383
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.40 E-value=0.0002 Score=51.67 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=28.3
Q ss_pred CcEEecCCCCeEEEEEEc----ccCCCeEEEEeCCCeeec
Q psy11558 27 NRIDFSNTTGAQVECTAR----GSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 27 ~~v~~~~g~~v~L~C~A~----G~P~P~I~W~~~dG~~i~ 62 (74)
..+.+..|+.+.|.|.|. |.|.|+|+|++ ||..+.
T Consensus 450 ~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k-~g~~~~ 488 (585)
T 2ocw_A 450 GNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNN-TGCQAL 488 (585)
T ss_pred CceeEecCCcEEEEEEecCCCCCCccEEEEEee-cCceee
Confidence 445567888899999997 88999999997 666553
No 384
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=97.40 E-value=0.00022 Score=42.58 Aligned_cols=37 Identities=11% Similarity=0.467 Sum_probs=29.1
Q ss_pred EEcCCCcEEecCCCCeEEEEEEc---ccCCCeEEEEeCCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTAR---GSPNPEIIWIRSDG 58 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~---G~P~P~I~W~~~dG 58 (74)
+..++..+....|++++|.|.+. +.+.+.|.|++.+.
T Consensus 7 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~ 46 (135)
T 1xt5_A 7 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGAS 46 (135)
T ss_dssp EECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESS
T ss_pred EeCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCC
Confidence 34456677788899999999976 47999999998643
No 385
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=97.40 E-value=0.00013 Score=46.78 Aligned_cols=29 Identities=24% Similarity=0.670 Sum_probs=23.6
Q ss_pred cCCCCeEEEEEEcc-cCC-C-eEEEEeCCCeee
Q psy11558 32 SNTTGAQVECTARG-SPN-P-EIIWIRSDGTAV 61 (74)
Q Consensus 32 ~~g~~v~L~C~A~G-~P~-P-~I~W~~~dG~~i 61 (74)
..|..+.|.|.|.| .|. | +|+|.+ ||..+
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~-~g~~~ 167 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSE-SGQGV 167 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESC-CSTTC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEE-CCEEC
Confidence 46777999999999 887 4 999985 77655
No 386
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=97.40 E-value=0.00014 Score=47.58 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=29.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 56 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 56 (74)
.+++.+++|+.. .+.+|++++|.|.+.|. |.|.|.|++.
T Consensus 7 ~~~v~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 47 (257)
T 3gkz_A 7 DKEVQLQESGPS-LVKPSQTLSLTCSVTGDSVTSGYWSWIRQ 47 (257)
T ss_dssp --CEEEEEECCS-EECTTCCEEEEEEEEESCCSSCEEEEEEE
T ss_pred CccEEEECCCCe-EEcCCCcEEEEEEEEcccccceEEEEEEE
Confidence 345566665554 47889999999999994 5899999984
No 387
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.40 E-value=0.00018 Score=42.35 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=27.9
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+++. |..+....|++++|.|.+.|.+ .+.|.|++.
T Consensus 3 v~q~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (108)
T 2coq_A 3 VDQT-PRIATKETGESLTINCVLRDTACALDSTNWYRT 39 (108)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEECCSSEEEEEEEEEEE
T ss_pred eEeC-CceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEc
Confidence 3455 4556678899999999999974 789999985
No 388
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.40 E-value=0.00011 Score=50.33 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=26.5
Q ss_pred cEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 28 RIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 28 ~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
.+.+.+|+.+.|.|.+.|.|.|.|+|+++++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~ 33 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQ 33 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTC
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCc
Confidence 3456688899999999999999999998554
No 389
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=97.40 E-value=0.00062 Score=49.39 Aligned_cols=28 Identities=21% Similarity=0.425 Sum_probs=23.1
Q ss_pred eEEEEEEcc-cCCCeEEEEeCCCeeecCCC
Q psy11558 37 AQVECTARG-SPNPEIIWIRSDGTAVGDVP 65 (74)
Q Consensus 37 v~L~C~A~G-~P~P~I~W~~~dG~~i~~~~ 65 (74)
+.|.|.|.| .|.|+|+|.+ ||.++....
T Consensus 490 ~~l~C~~~~~~P~~~i~W~~-~g~~l~~~~ 518 (581)
T 3o3u_N 490 KVGTCVSEGSYPAGTLSWHL-DGKPLVPNE 518 (581)
T ss_dssp EEEEEEEEEEBSCCEEEEEE-TTEECCTTS
T ss_pred eEEEEECCCCCCCCeEEEEE-CCEECCCCC
Confidence 567999999 5999999986 888876543
No 390
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.39 E-value=0.0001 Score=46.72 Aligned_cols=35 Identities=11% Similarity=0.398 Sum_probs=26.3
Q ss_pred CCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeeecCC
Q psy11558 26 PNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDV 64 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i~~~ 64 (74)
+-.+. ..|+.+.|.|.|.| |.+ |+|++ ||..+...
T Consensus 7 ~~~v~-~~G~~v~L~C~~~~-~~~-i~W~k-~g~~l~~~ 41 (186)
T 1jbj_A 7 EYKVS-ISGTSVELTCPLDS-DEN-LKWEK-NGQELPQK 41 (186)
T ss_dssp CCEEE-EETTEEEEECSSCC-CTT-CEEEE-TTEEECSC
T ss_pred EEEEE-eCCcEEEEEEeCCC-CCc-eEEEE-CCEECCCC
Confidence 44444 45778999999999 655 99996 88887653
No 391
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=97.37 E-value=0.00026 Score=44.25 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=26.6
Q ss_pred CCCCeEEEEEEccc-CCCeEEEEeCCCeeecCCCCce
Q psy11558 33 NTTGAQVECTARGS-PNPEIIWIRSDGTAVGDVPGLR 68 (74)
Q Consensus 33 ~g~~v~L~C~A~G~-P~P~I~W~~~dG~~i~~~~~~r 68 (74)
.+.++.|.|.+.|. |.|.|+|++ ||..+......+
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~-~g~~i~~~~~~~ 51 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSH-NGSAIRYSDRVK 51 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEE-TTEECCCCSSEE
T ss_pred cCceEEEEEEEeccCCCceEEEEE-CCEEccCCCeEE
Confidence 45568999999995 599999997 788876654443
No 392
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.37 E-value=0.00019 Score=46.58 Aligned_cols=38 Identities=8% Similarity=0.306 Sum_probs=28.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+|.++..|+. +...+|+.++|.|.+.|.| .|.|.|++.
T Consensus 131 ~~~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 131 SEVQLQQSGP-ELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp ----CEECCC-EEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred cceEEecCCc-eEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 3455666544 4577888999999999988 899999974
No 393
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.37 E-value=0.00084 Score=39.79 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=28.6
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.++. |..+...+|++++|.|.+++.+.+.|.|++.
T Consensus 4 v~q~-p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq 38 (112)
T 1fo0_B 4 LEQN-PRWRLVPRGQAVNLRCILKNSQYPWMSWYQQ 38 (112)
T ss_dssp EEEE-CSEEECCTTCCEEEEEEESCTTCCEEEEEEE
T ss_pred EEeC-CCeEEEecCCcEEEEEEeCCCCCceEEEEEE
Confidence 3455 4556678899999999998888999999975
No 394
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.36 E-value=0.0003 Score=47.36 Aligned_cols=45 Identities=20% Similarity=0.505 Sum_probs=32.1
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
..+|.+...++..... .|..+.|.|.|.| .|.+ +|+|.+ ||..+.
T Consensus 128 ~~~P~V~v~~~~~~~~-~g~~~~L~C~~~gf~P~~i~v~W~k-~g~~~~ 174 (240)
T 4acp_A 128 PREPQVYTLPPSRDEL-TKNQVSLTCLVKGFYPSDIAVEWES-NGQPEN 174 (240)
T ss_dssp CBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCCCEEEEECCChHHh-cCCceEEEEEEeEEeCCCcEEEEEE-CCEECC
Confidence 4567666666554323 3667999999999 6765 899997 777654
No 395
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.35 E-value=0.00021 Score=46.73 Aligned_cols=34 Identities=15% Similarity=0.427 Sum_probs=27.5
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEe
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIR 55 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~ 55 (74)
++++| ..+.+.+|++++|.|.+.|.| .|.|.|++
T Consensus 4 ~~~~p-~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r 39 (253)
T 3uzq_A 4 LLEQS-GAELVKPGASVRLSCTASGFNIKDTYMSWVK 39 (253)
T ss_dssp CEEEC-CCEEECTTCCEEEEEEECSSCGGGSCEEEEE
T ss_pred eEecC-CCeeecCCCcEEEEEEeeCCcccCceEEEEE
Confidence 34554 455678899999999999965 89999998
No 396
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.35 E-value=0.00026 Score=51.68 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=32.0
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
.+|.....||....+..|..+.|.|.|.|.++| +|+|.+ ||..+.
T Consensus 295 ~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k-~g~~~~ 341 (512)
T 1zvo_C 295 QPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWEV-AGKVPT 341 (512)
T ss_pred CCCEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEEE-CCEecc
Confidence 456655555554445568889999999997444 999997 666554
No 397
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.35 E-value=0.00018 Score=43.57 Aligned_cols=36 Identities=25% Similarity=0.469 Sum_probs=29.2
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccC----CCeEEEEeC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRS 56 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P----~P~I~W~~~ 56 (74)
.+++. |..+.+.+|+.|+|.|.+++.+ .+.|.|++.
T Consensus 3 ~v~q~-p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (126)
T 4ffy_L 3 VLTQS-PASLAVSLGQRATISCRASESVDHYGNSFIYWYQQ 42 (126)
T ss_dssp CEEEE-CSEEEEETTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred cEEeC-CCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEE
Confidence 34555 5666778899999999999998 789999984
No 398
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.34 E-value=0.00011 Score=48.11 Aligned_cols=30 Identities=13% Similarity=0.303 Sum_probs=23.3
Q ss_pred cCCCCeEEEEEEccc-CC-CeEEEEeCCCeee
Q psy11558 32 SNTTGAQVECTARGS-PN-PEIIWIRSDGTAV 61 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i 61 (74)
..|..+.|.|.|.|. |. |+|+|.++++..+
T Consensus 145 ~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l 176 (242)
T 1hxm_B 145 KLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTI 176 (242)
T ss_dssp GSSSCEEEEEEEEEESSCCEEEEEEESSSCCC
T ss_pred ccCCCceEEEEEeeEECCCeEEEEEcCCCEee
Confidence 357789999999997 75 7999998544344
No 399
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.34 E-value=0.00031 Score=41.54 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=28.1
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC-----CCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP-----NPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P-----~P~I~W~~~d 57 (74)
++. |..+...+|++|+|.|.+++.+ .+.|.|++..
T Consensus 5 ~q~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~ 44 (113)
T 1dlf_L 5 TQT-PLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQK 44 (113)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred EEe-CCEEEEcCCCCEEEEEEccccccccCCCceEEEEEEC
Confidence 444 4556788899999999999987 5899998753
No 400
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.34 E-value=5.2e-05 Score=49.62 Aligned_cols=29 Identities=17% Similarity=0.416 Sum_probs=24.2
Q ss_pred CCCeEEEEEEccc-CC-CeEEEEeCCCeeec
Q psy11558 34 TTGAQVECTARGS-PN-PEIIWIRSDGTAVG 62 (74)
Q Consensus 34 g~~v~L~C~A~G~-P~-P~I~W~~~dG~~i~ 62 (74)
|..+.|.|.|.|. |. ++|+|.+.||..+.
T Consensus 145 g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~ 175 (230)
T 1ypz_F 145 HKTGTYLCLLEAFFPDVIRVYWKEKDGNTIL 175 (230)
T ss_dssp HSCEEEEEEEEEESSCCCEEEEECTTSSCBC
T ss_pred CCcceEEEEEeeecCCCeEEEEEccCCeEcc
Confidence 5679999999997 86 69999986887664
No 401
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=97.34 E-value=0.00047 Score=42.75 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=31.0
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
...+|.....|+.. ...|..++|.|.|.|-.+| +|+|.+ ||+.+.
T Consensus 21 ~~~~P~V~v~~~~~--~~~~~~~tL~C~a~gFyP~~I~v~W~k-nG~~i~ 67 (119)
T 1bii_B 21 IQKTPQIQVYSRHP--PENGKPNILNCYVTQFHPPHIEIQMLK-NGKKIP 67 (119)
T ss_dssp CCBCCEEEEEESSC--CCSSSCEEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred CCcCCEEEEEcCCc--ccCCCCEEEEEEEEeecCCCeEEEEEE-CCEECC
Confidence 34667666543333 2345579999999996444 899996 888874
No 402
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.33 E-value=0.00031 Score=44.62 Aligned_cols=39 Identities=18% Similarity=0.389 Sum_probs=31.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
.+.+++. |..+...+|++|+|.|.+++.+.+.|.|++.+
T Consensus 16 ~~~v~q~-p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~ 54 (146)
T 2yc1_B 16 EIVLTQS-PATLSVSPGERATLSCRASQSVRSYLAWYQQK 54 (146)
T ss_dssp CCCEEEE-CSEEEECTTSCEEEEEEESSCCTTCEEEEEEC
T ss_pred cceEEEe-CCEEEEecCCCEEEEEEECCCCCCEEEEEEEC
Confidence 3445555 55667889999999999999999999999853
No 403
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=97.32 E-value=0.00051 Score=42.33 Aligned_cols=39 Identities=18% Similarity=0.286 Sum_probs=31.4
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.++.+++.|.. +....|++++|.|.+++.+.+.+.|++.
T Consensus 3 ~~~~v~Q~p~~-~~v~~G~~vtL~C~~s~~~~~~v~WyrQ 41 (128)
T 1nez_G 3 QAPELRIFPKK-MDAELGQKVDLVCEVLGSVSQGCSWLFQ 41 (128)
T ss_dssp -CCEEEEESSC-EEECTTCCEEEEEEEESCCSSCEEEEEE
T ss_pred cCCeeEECCCe-EEEcCCCCEEEEEEeCccCCCcEEEEEe
Confidence 45678888654 4678899999999999887789999974
No 404
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=97.32 E-value=0.0002 Score=48.47 Aligned_cols=37 Identities=14% Similarity=0.356 Sum_probs=29.3
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCC------eEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNP------EIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P------~I~W~~~d 57 (74)
.+.+. +..+.+.+|++++|.|.+.|.|.| .|.|++.+
T Consensus 161 ~v~~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~ 203 (291)
T 2gki_A 161 VMSQS-PSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQK 203 (291)
T ss_dssp CEECS-CSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEEC
T ss_pred eEEcC-CCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEEC
Confidence 34444 555667789999999999999987 99999853
No 405
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.32 E-value=0.00067 Score=45.31 Aligned_cols=43 Identities=14% Similarity=0.129 Sum_probs=33.9
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
...+|.+..+|.. .+..|+.++|.|.+.+ +.+.++|++ ||..+
T Consensus 4 ~~~kP~i~~~P~~--~v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~ 46 (242)
T 1p6f_A 4 TLPKPFIWAEPHF--MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLF 46 (242)
T ss_dssp CCCCCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEE-TTEEE
T ss_pred CCCCCEEEeeCCC--ccCCCCcEEEEEeeCC-CCcEEEEEE-CCCcc
Confidence 3568999999766 3567888999999987 568999997 66654
No 406
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.31 E-value=0.0011 Score=39.35 Aligned_cols=32 Identities=13% Similarity=0.350 Sum_probs=26.9
Q ss_pred CCCcEEecCCCCeEEEEEEccc-CCCeEEEEeC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 56 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 56 (74)
+|..+...+|++|+|.|.+.+. +.+.+.|++.
T Consensus 6 ~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq 38 (116)
T 1fo0_A 6 TQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQ 38 (116)
T ss_dssp CCCEEEEETTCCEEECCEECCCCSSCEEEEEEE
T ss_pred CCCcEEEecCCcEEEEeEecCCCCCeEEEEEEe
Confidence 3566678889999999999998 7789999874
No 407
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=97.30 E-value=0.00036 Score=45.35 Aligned_cols=35 Identities=20% Similarity=0.435 Sum_probs=28.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
+++| ..+.+..|++++|.|.+.|.| .+.|.|++.+
T Consensus 4 l~qp-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (227)
T 1mju_H 4 LQQP-GAELVKPGASVKLSCKASGYTFTNYWINWVKQR 40 (227)
T ss_dssp EECC-SEEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EcCC-CCeEEcCCCCEEEEEEecCCccccceEEEEEeC
Confidence 4554 455678899999999999998 8999999854
No 408
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.30 E-value=0.00021 Score=47.35 Aligned_cols=34 Identities=12% Similarity=0.324 Sum_probs=27.5
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+++|+ .+.+..|++++|.|.+.|.| .|.|.|++.
T Consensus 4 l~~p~-~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~ 39 (256)
T 1nqb_A 4 LQQSG-AELVKPGASVKLSCKASGYTFTSYWMHWVKQ 39 (256)
T ss_dssp EEECC-CEEECTTCCEEEEEEECSSCGGGSCEEEEEE
T ss_pred EECCC-CeeecCCCcEEEEEEeccccCCCceEEEEEE
Confidence 44544 45678899999999999997 789999985
No 409
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.29 E-value=0.00024 Score=45.31 Aligned_cols=27 Identities=15% Similarity=0.345 Sum_probs=22.4
Q ss_pred CCCeEEEEEE-cccCCCeEEEEeCCCeeec
Q psy11558 34 TTGAQVECTA-RGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 34 g~~v~L~C~A-~G~P~P~I~W~~~dG~~i~ 62 (74)
+..+.|.|.| .| |.|+|+|++ ||.++.
T Consensus 115 ~~~v~L~C~~~~g-p~p~i~W~~-~~~~l~ 142 (180)
T 2dru_A 115 CSNATLTCEVLEG-TDVELKLYQ-GKEHLR 142 (180)
T ss_dssp GGGTEEEEECSSC-TTCEEEEEE-TTEEEE
T ss_pred CCCEEEEEEeCCC-CCCEEEEEE-CCeECc
Confidence 4569999999 77 999999997 676664
No 410
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.29 E-value=0.00025 Score=48.45 Aligned_cols=35 Identities=14% Similarity=0.415 Sum_probs=27.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
+.+|+ .+.+..|+.+.|.|.+.|.| .|.|+|++.+
T Consensus 4 l~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 40 (344)
T 1za6_B 4 LVQSG-AEVVKPGASVKISCKASGYTFTDHAIHWVKQN 40 (344)
T ss_dssp EEECC-CEEECTTCCEEEEEEEESSCTTSSCEEEEEEC
T ss_pred eeCCC-CeEEeCCCcEEEEEEcCCccccccEEEEEEEC
Confidence 44544 45678899999999999984 7999999853
No 411
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=97.28 E-value=0.00031 Score=46.09 Aligned_cols=38 Identities=11% Similarity=0.238 Sum_probs=29.8
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeC
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 56 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 56 (74)
.|.+++.| ..+.+.+|++++|.|.+.|. |.|.|.|++.
T Consensus 136 ~~~v~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 136 AQKVTQAQ-SSVSMPVRKAVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp -CEEECCC-CCEEEETTCCEEECCEEECCCSSCEEEEEEE
T ss_pred CeeeEEeC-CEEEEcCCCCEEEEEECCCccCCceEEEeee
Confidence 45666664 45567788899999999996 8999999974
No 412
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=97.28 E-value=0.00018 Score=49.34 Aligned_cols=36 Identities=8% Similarity=0.210 Sum_probs=27.9
Q ss_pred cCCCcEEecCCCCeEEEEEEcccC-CCeEEEEeCCCe
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRSDGT 59 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P-~P~I~W~~~dG~ 59 (74)
.|+..+....|+.++|.|.|.|.| .|.|+|+++++.
T Consensus 11 ~p~~~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~ 47 (325)
T 1n26_A 11 VARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPA 47 (325)
T ss_dssp CCTTEEEECTTCCEEEECTTSCTTCCSEEEEEEECSS
T ss_pred cCCCcEECCCCCcEEEEeCCCCCCCCceEEEEECCcc
Confidence 345555446888999999999876 899999985543
No 413
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.28 E-value=0.00032 Score=49.38 Aligned_cols=45 Identities=13% Similarity=0.296 Sum_probs=31.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~dG~~i~ 62 (74)
..+|.+...|+.... ..|..++|.|.|.|.+ .++|+|++ ||..+.
T Consensus 272 ~~~P~v~v~~~~~~~-~~g~~~~L~C~~~g~~P~~i~v~W~k-~g~~~~ 318 (376)
T 2aty_A 272 PKAPQLYTIPPPKEQ-MAKDKVSLTCMITDFFPEDITVEWQW-NGQPAE 318 (376)
T ss_pred CcCCeEEeeCCCHHH-hcCCceEEEEEEEEeECCCcEEEEEE-CCEECC
Confidence 456766666555432 2466799999999963 56999996 787664
No 414
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.28 E-value=0.00034 Score=45.60 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=26.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+..++.. .+.+|++++|.|.+.|.| .|.|.|++.
T Consensus 138 ~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 138 LVESGGG-LVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp EEEECCE-EECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EEcCCCe-EEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 3333444 367888999999999988 899999975
No 415
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=97.27 E-value=0.0004 Score=44.87 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=28.7
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
+.+++. |..+.+..|++++|.| +.|.|.+.|.|++
T Consensus 3 ~~v~~~-p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r 37 (245)
T 4ei6_B 3 PKVLQI-PSHQIIDMGQMVTLNC-DPVSNHLYFYWYK 37 (245)
T ss_dssp CCCEEE-CSEEEEETTCCEEEEE-ECCTTCCEEEEEE
T ss_pred cceEeC-CceEEecCCCCEEEEE-EcCCCCCEEEEEE
Confidence 445666 4566678899999999 8899999999997
No 416
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=97.27 E-value=0.00023 Score=47.29 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=25.5
Q ss_pred CCcEEecCCCCeEEEEE-EcccCCCeEEEEeCCCeee
Q psy11558 26 PNRIDFSNTTGAQVECT-ARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~-A~G~P~P~I~W~~~dG~~i 61 (74)
+..+....|..+.|.|. +.|+|.|+|+|.+ ||..+
T Consensus 121 ~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~-~~~~~ 156 (308)
T 4fom_A 121 PDSLIDGGNETVAAICIAATGKPVAHIDWEG-DLGEM 156 (308)
T ss_dssp SSCCCTTCSCEEEEEEEEEEEBSCCEEEECC-CSSBC
T ss_pred cceeEEcCCceEEEEEEecCCcCCceEEEEE-CCccc
Confidence 33434455667999997 5799999999996 55544
No 417
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.27 E-value=0.00017 Score=47.94 Aligned_cols=32 Identities=13% Similarity=0.352 Sum_probs=27.4
Q ss_pred EecCCCCeEEEEEE------cccCCCeEEEEeCCCeeec
Q psy11558 30 DFSNTTGAQVECTA------RGSPNPEIIWIRSDGTAVG 62 (74)
Q Consensus 30 ~~~~g~~v~L~C~A------~G~P~P~I~W~~~dG~~i~ 62 (74)
.+..|+.+.|.|.+ .|+|.|+|+|++ ||.++.
T Consensus 114 ~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k-~~~~l~ 151 (315)
T 1itb_B 114 KLPVAGDGGLVCPYMEFFKNENNELPKLQWYK-DCKPLL 151 (315)
T ss_dssp EEETTSCEEEECSSCTTTCTTTTCCCCCEEEE-TTEECC
T ss_pred EEecCCCeEEEEecccccccCCCCCCEEEEEE-CCEECC
Confidence 45678889999999 999999999996 787764
No 418
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.27 E-value=0.00013 Score=48.16 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=26.5
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
.+|+.. .+..|++++|.|.|.|.| .|.|.|++.
T Consensus 5 ~~p~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 39 (257)
T 1f3r_B 5 LESGPG-LVRPSETLSLTCTVSGFSLTSFSVSWVRH 39 (257)
T ss_dssp EEECCS-EECTTSEEEEEEEEESSCTTTSCCEEEEE
T ss_pred ECCCCc-cccCCceEEEEEEEecccCCCccEEEEEe
Confidence 344444 477888999999999996 899999985
No 419
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=97.26 E-value=0.00086 Score=39.82 Aligned_cols=29 Identities=17% Similarity=0.388 Sum_probs=23.1
Q ss_pred CCCCeEEEEEEccc-CCC-eEEEEeCCCeeec
Q psy11558 33 NTTGAQVECTARGS-PNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 33 ~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i~ 62 (74)
.|..++|.|.|.|- |.+ +|+|.+ ||+.+.
T Consensus 17 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 47 (97)
T 3gbl_A 17 YGKENTLICYVSGFHPPDISIELLK-NGEVIA 47 (97)
T ss_dssp TTCCEEEEEEEECCBSSCEEEEEEE-TTEECT
T ss_pred CCCcEEEEEEEcceeCCccEEEEEE-CCccCc
Confidence 35569999999996 554 899996 788774
No 420
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.26 E-value=0.00021 Score=48.87 Aligned_cols=29 Identities=7% Similarity=0.132 Sum_probs=24.6
Q ss_pred ecCCCCeEEEEEEcccCCCeEEEEeCCCe
Q psy11558 31 FSNTTGAQVECTARGSPNPEIIWIRSDGT 59 (74)
Q Consensus 31 ~~~g~~v~L~C~A~G~P~P~I~W~~~dG~ 59 (74)
+.+|+.+.|.|.+.|.|.|+|+|.++++.
T Consensus 108 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~ 136 (363)
T 1wio_A 108 LLQGQSLTLTLESPPGSSPSVQCRSPRGK 136 (363)
T ss_dssp EESBSCEEEEEECCTTCCCCEEEECSSSC
T ss_pred EecCCCEEEEEEcCCCCCCeEEEEcCCCc
Confidence 45788899999999999999999975443
No 421
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.26 E-value=0.00047 Score=45.11 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=29.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~d 57 (74)
.+++. |..+....|++++|.|.+.|. +.+.|.|++.+
T Consensus 3 ~v~q~-p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 41 (242)
T 1hxm_B 3 HLEQP-QISSTKTLSKTARLECVVSGITISATSVYWYRER 41 (242)
T ss_dssp EEECC-CSEEEEETTCCEEEEEEEESSCTTTSCEEEEEEC
T ss_pred ccCcC-CceEEecCCCcEEEEEEeCCccccCceEEEEEeC
Confidence 34454 566678889999999999997 78999999753
No 422
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=97.25 E-value=0.00016 Score=44.87 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=27.5
Q ss_pred cCCCcEEecCCCCeEEEEEEcccC----CCeEEEEeC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRS 56 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P----~P~I~W~~~ 56 (74)
.|++.+.+..|+.+.|.|.+.|.| .|.|+|.+.
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~ 41 (214)
T 3jz7_A 5 TPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLIS 41 (214)
T ss_dssp -CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEE
T ss_pred cCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEec
Confidence 456677788899999999999998 689999873
No 423
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.25 E-value=0.00021 Score=46.63 Aligned_cols=33 Identities=15% Similarity=0.454 Sum_probs=27.5
Q ss_pred EcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 56 (74)
.+|+ .+.+.+|++++|.|.+.|. |.|.|.|++.
T Consensus 7 ~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3ux9_B 7 TQPP-SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQ 41 (256)
T ss_dssp BCCS-EEEECTTCCEEEEEECCTTTTTTSCCEEEEE
T ss_pred ecCC-cEEEcCCCcEEEEEecCCCCCCCceEEEEEE
Confidence 3444 4677889999999999998 8999999974
No 424
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=97.24 E-value=0.00017 Score=45.78 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=26.1
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
.+|+. +.+..|++++|.|.+.|.| .|.|+|++.
T Consensus 5 ~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (210)
T 3d9a_H 5 QESGP-SLVKPSQTLSLTCSVTGDSITSDYWSWIRK 39 (210)
T ss_dssp EEESC-SEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ecCCC-EEecCCCcEEEEEEEecccCCCCcEEEEEe
Confidence 34443 4577888999999999987 499999875
No 425
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=97.24 E-value=0.00038 Score=43.04 Aligned_cols=35 Identities=14% Similarity=0.323 Sum_probs=28.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
..+++. |..+....|+.++|.|.+.|. |.|.|++.
T Consensus 18 ~~v~q~-p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~ 52 (133)
T 3khq_A 18 SQIWQH-PRFAAKKRSSMVKFHCYTNHS--GALTWFRK 52 (133)
T ss_dssp CSEEEE-CSEEEECTTCCEEEEEEESSS--SCEEEEEE
T ss_pred CceEEc-CceEEEeCCCeEEEEEEeCCC--CEEEEEEe
Confidence 356666 455667889999999999998 99999985
No 426
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.24 E-value=0.00014 Score=47.30 Aligned_cols=39 Identities=10% Similarity=0.236 Sum_probs=27.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEc---ccCCCeEEEEeCCC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTAR---GSPNPEIIWIRSDG 58 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~---G~P~P~I~W~~~dG 58 (74)
+.++.. +..+.+.+|+++.|.|.+. |.|.|.|+|++.++
T Consensus 6 ~~v~~~-~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~ 47 (268)
T 3mj6_A 6 PGLTVS-SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKD 47 (268)
T ss_dssp -------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESS
T ss_pred cccccC-CCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCC
Confidence 344555 4456678899999999999 99999999998544
No 427
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=97.23 E-value=0.00031 Score=44.79 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=27.8
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
+.+| ..+.+..|++++|.|.+.|.| .|.|.|++.+
T Consensus 4 v~~p-~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (220)
T 1pz5_B 4 VEES-GGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQS 40 (220)
T ss_dssp EEEE-CCEEECTTCCEEEEEEEESSCGGGSEEEEEEEE
T ss_pred Eecc-CCEEEcCCCeEEEEEEEcCCccCCccEEEEEeC
Confidence 3444 345677888999999999988 8999999853
No 428
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.22 E-value=0.0001 Score=47.21 Aligned_cols=39 Identities=10% Similarity=0.290 Sum_probs=27.8
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccC-CC-eEEEEeCC
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSP-NP-EIIWIRSD 57 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P-~P-~I~W~~~d 57 (74)
..+.+++ | ..+.+..|++++|.|.+.|.| .| .|+|++.+
T Consensus 19 ~~~~v~~-p-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~ 59 (234)
T 2j6e_L 19 AQSVLTQ-P-PSASGTPGQRVTISCSGSSSNIGSNYVYWYQQL 59 (234)
T ss_dssp -CCCCBC-C-SCCCBCTTCEEEEEEECCTTTTTTSCCEEEEEC
T ss_pred cccEEeC-C-CcEEeeCCCcEEEEEEecCCCCCCCeEEEEEec
Confidence 3444555 4 444567888999999999975 45 79999753
No 429
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=97.21 E-value=0.0006 Score=40.74 Aligned_cols=43 Identities=23% Similarity=0.563 Sum_probs=32.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccC----CCeEEEEeCC---Ceee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSP----NPEIIWIRSD---GTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P----~P~I~W~~~d---G~~i 61 (74)
+-.++..| ..+.+..|++++|.|.+++.+ .+.|.|++.+ |..+
T Consensus 7 ~~~~v~~p-~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~ 56 (120)
T 3noi_A 7 GALWVSQP-PEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEV 56 (120)
T ss_dssp CBCCEECC-SEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBC
T ss_pred EEEEEcCC-CEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCcee
Confidence 33456665 466778899999999999887 6789999875 5544
No 430
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=97.21 E-value=0.00019 Score=41.45 Aligned_cols=36 Identities=28% Similarity=0.465 Sum_probs=28.1
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCCC----eEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPNP----EIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~P----~I~W~~~d 57 (74)
+..++..+....|++++|.|.+.+.|.+ .|.|++.+
T Consensus 8 v~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~ 47 (126)
T 1eaj_A 8 ITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISP 47 (126)
T ss_dssp ESSSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEE
T ss_pred EECCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeC
Confidence 3345566777889999999999998764 59999854
No 431
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.20 E-value=0.00058 Score=42.29 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=28.3
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 56 (74)
.++. |..+...+|++++|.|.+++. |.+.+.|++.
T Consensus 3 V~Q~-p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq 39 (126)
T 3moq_A 3 VDQT-PRTATKETGESLTINCVLRDASFELKDTGWYRT 39 (126)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred eEEC-CceEEEeCCCCEEEEEEeecCccCCceEEEEEe
Confidence 3455 566678889999999999987 6889999984
No 432
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=97.20 E-value=0.00034 Score=45.21 Aligned_cols=34 Identities=12% Similarity=0.356 Sum_probs=27.9
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
.+++. |..+.+..|++++|.|.+.| |.|.|+|++
T Consensus 4 ~v~~~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k 37 (240)
T 3q5y_A 4 GVVQS-PRHIIKEKGGRSVLTCIPIS-GHSNVVWYQ 37 (240)
T ss_dssp CCEEE-CSEEEEETTCCEEEEEECCT-TCCEEEEEE
T ss_pred ccccC-cceeeecCCCcEEEEEEeCC-CCceEEEEE
Confidence 34455 56667788999999999998 999999997
No 433
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=97.20 E-value=0.00039 Score=50.14 Aligned_cols=41 Identities=15% Similarity=0.332 Sum_probs=31.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeE----EEEeC-CCe
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEI----IWIRS-DGT 59 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I----~W~~~-dG~ 59 (74)
+|.+... +..+....|+.+.|.|.|.|.|.|.+ +|.+. ||.
T Consensus 331 ~p~~~~~-~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~ 376 (585)
T 2ocw_A 331 ESTIPRS-PTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGR 376 (585)
T ss_pred ccccccC-CcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCC
Confidence 4555554 45556678888999999999999998 89863 565
No 434
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.20 E-value=0.00056 Score=44.99 Aligned_cols=37 Identities=14% Similarity=0.278 Sum_probs=28.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
.+|.+++.| ..+.+..|.+++|.|.+.|. .|.|+|++
T Consensus 136 ~~~~v~~~p-~~~~v~~G~~v~L~C~~~~~-~~~v~W~k 172 (256)
T 3tf7_C 136 SEAAVTQSP-RNKVTVTGENVTLSCRQTNS-HNYMYWYR 172 (256)
T ss_dssp --CCEEESC-SEEEEETTCCEEECEEECSC-CSEEEEEE
T ss_pred CccEEEecC-CEEEEeCCCcEEEEEEcCCC-ceEEEEEE
Confidence 456677764 55556688899999999998 89999997
No 435
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=97.19 E-value=0.00054 Score=39.41 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=26.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEE-cccCCCe----EEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTA-RGSPNPE----IIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A-~G~P~P~----I~W~~~ 56 (74)
++.|++ +....|++++|.|.+ .+.|.+. |.|++.
T Consensus 4 v~~p~~-v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 42 (118)
T 3udw_C 4 VQAPTQ-VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH 42 (118)
T ss_dssp EECCSE-EEEETTSCEEECCEEECCTTCCCEEEEEEEEET
T ss_pred EeCCCe-EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEc
Confidence 455555 777889999999999 6677665 999985
No 436
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.18 E-value=0.0016 Score=38.43 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=27.1
Q ss_pred EEcCCCcEEecCCCCeEEEEEEccc-CCCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 56 (74)
++. |..+...+|++|+|.|.+++. +.+.|.|++.
T Consensus 4 ~q~-p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~ 38 (116)
T 1tvd_A 4 TQS-SPDQTVASGSEVVLLCTYDTVYSNPDLFWYRI 38 (116)
T ss_dssp ECC-SCCEEEETTCCEEECCEEECCSSSCCEEEEEE
T ss_pred ecC-CCcEEEecCCeEEEEeEeEcCCCCcEEEEEEe
Confidence 344 555667889999999999876 6789999874
No 437
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.18 E-value=0.0004 Score=44.16 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=28.4
Q ss_pred CCCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCCeee
Q psy11558 25 PPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDGTAV 61 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG~~i 61 (74)
.|..+....|++|.|.|.+.+ .|.|.|+|++ +|..+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~-~~~~i 40 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLF-NETSL 40 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEE-TTEEE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEE-CCEEE
Confidence 356667788999999999986 5678999997 46544
No 438
>3c5j_A HLA class II histocompatibility antigen, DR alpha; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 1d5x_A* 1d5z_A* 1d6e_A* 1d5m_A 1fyt_A* 1hqr_A 1j8h_A* 1r5i_A 1seb_A 1zgl_A 2seb_A* 1fv1_A* 2ipk_A* 3pdo_A 3pgc_A 3pgd_A 1ymm_A* 1aqd_A 2g9h_A* 1h15_A ...
Probab=97.17 E-value=0.00099 Score=43.48 Aligned_cols=43 Identities=16% Similarity=0.351 Sum_probs=29.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
.+|.....++... ..+..++|.|.|.| .|++ +|+|.+ ||+.+.
T Consensus 85 ~~P~v~v~~~~~~--~~~~~~~L~C~a~gFyP~~i~v~W~k-~g~~~~ 129 (181)
T 3c5j_A 85 VPPEVTVLTNSPV--ELREPNVLICFIDKFTPPVVNVTWLR-NGKPVT 129 (181)
T ss_dssp BCCEEEEEESSCC--CTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred cCCceecccCChh--hcCCCCeEEEEEeEEECCCCEEEEEE-CCEECC
Confidence 4565555444322 34556999999999 6764 899996 888874
No 439
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=97.17 E-value=0.00033 Score=45.27 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=27.2
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
.+|+. +.+..|++++|.|.+.|.| .+.|.|++.+
T Consensus 5 ~qp~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (225)
T 1op3_H 5 VESGG-GLVKAGGSLILSCGVSNFRISAHTMNWVRRV 40 (225)
T ss_dssp EEECC-EEEETTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EcCCC-eEecCCCCEEEEEEecCcccCCceEEEEEeC
Confidence 44444 4577888999999999988 8999998754
No 440
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=97.16 E-value=0.001 Score=44.25 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=25.0
Q ss_pred CCcEEecCC---CCeEEEEE-EcccCCCeEEEEeC
Q psy11558 26 PNRIDFSNT---TGAQVECT-ARGSPNPEIIWIRS 56 (74)
Q Consensus 26 p~~v~~~~g---~~v~L~C~-A~G~P~P~I~W~~~ 56 (74)
+..+....| ..+.|.|. +.|.|.|+|+|.++
T Consensus 139 ~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 139 QAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp SSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred CCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 445556666 55999997 99999999999974
No 441
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.15 E-value=0.00072 Score=45.79 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=29.9
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
..|.+...|... +.+|+.++|.|.|.|.| +++.|.+ ||..+
T Consensus 106 ~~P~l~~~p~~~--V~~G~~vtL~C~~~~~~-~~~~w~k-~g~~~ 146 (257)
T 1b6u_A 106 EKPSLSAQPGPT--VLAGESVTLSCSSRSSY-DMYHLSR-EGEAH 146 (257)
T ss_dssp CCCEEECSSCTT--CBTTCEEEEEEECSSCC-SEEEEEE-TTSSC
T ss_pred CCcceEccCCCc--cCCCCEEEEEEeCCCCC-cEEEEEE-CCccc
Confidence 356666665433 46788899999999965 8999997 55544
No 442
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.14 E-value=0.00037 Score=43.48 Aligned_cols=28 Identities=4% Similarity=0.116 Sum_probs=24.3
Q ss_pred EecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 30 DFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 30 ~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
.+..|+.+.|.|.+.|.|.+.|+|++.+
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~ 37 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGN 37 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESS
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCC
Confidence 3567889999999999999999999753
No 443
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=97.14 E-value=0.0025 Score=37.68 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=25.9
Q ss_pred CCcEEecCCCCeEEEEEEccc-CCCeEEEEeC
Q psy11558 26 PNRIDFSNTTGAQVECTARGS-PNPEIIWIRS 56 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~ 56 (74)
|..+...+|++++|.|.+.+. +.+.|.|++.
T Consensus 8 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 39 (115)
T 2otu_A 8 SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQ 39 (115)
T ss_dssp CCCEECCTTCCEEEEEEECGGGTTCCEEEEEE
T ss_pred CCCEEECCCCCEEEEEEecCCCCCeEEEEEEe
Confidence 345667889999999999987 7899999874
No 444
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=97.13 E-value=0.00033 Score=44.72 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=26.8
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
.+|+. +.+..|++++|.|.+.|.| .|.|.|++.+
T Consensus 5 ~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (222)
T 1q9r_B 5 VESGG-GLVQSGGSLRLSCATSGFTFTDYYMSWVRQP 40 (222)
T ss_dssp EEECC-CEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred ecCCc-eeEcCCCEEEEEEEecCccCCCCcEEEEEEC
Confidence 44443 4567888999999999987 8999999753
No 445
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=97.13 E-value=0.00035 Score=41.23 Aligned_cols=31 Identities=13% Similarity=0.321 Sum_probs=26.7
Q ss_pred CCcEEecCCCCeEEEEEEc-ccCCCeEEEEeC
Q psy11558 26 PNRIDFSNTTGAQVECTAR-GSPNPEIIWIRS 56 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~-G~P~P~I~W~~~ 56 (74)
|..+...+|++|+|.|.++ +.+.+.|.|++.
T Consensus 6 p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 37 (111)
T 2qhl_A 6 LHVKTVKRGENVTMECSMSKVKDKDKLAWYRQ 37 (111)
T ss_dssp CEEEECCTTCCEEECCBCTTCSCGGGEEEEEE
T ss_pred CceEEEeCCCCEEEEEEccCCcccceEEEEEe
Confidence 4556678899999999999 999999999874
No 446
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.13 E-value=0.00058 Score=45.03 Aligned_cols=36 Identities=19% Similarity=0.464 Sum_probs=28.7
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
...+++. |..+.+..|++++|.|.+.+ |.+.|.|++
T Consensus 27 ~~~v~~~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k 62 (270)
T 3qib_D 27 GMKVIQT-PRYLVKGQGQKAKMRCIPEK-GHPVVFWYQ 62 (270)
T ss_dssp -CCCEEE-CSEEEEETTSCEEEEEECCT-TCCEEEEEE
T ss_pred ceeEEeC-CCeEEEcCCCCEEEEEEecC-CCceEEEEE
Confidence 3455555 56667888999999999987 889999987
No 447
>3c5j_B MHC class II antigen; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 2q6w_B 1a6a_B* 1d5m_B* 1j8h_B* 1d5z_B* 1d5x_B* 1d6e_B* 2seb_B* 2wbj_B* 1ymm_B* 3l6f_B* 3s4s_B 3s5l_B 1fyt_B* 1seb_B 1bx2_B* 1zgl_B 1fv1_B 1h15_B* 1hqr_B ...
Probab=97.13 E-value=0.00062 Score=44.22 Aligned_cols=44 Identities=20% Similarity=0.435 Sum_probs=28.6
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
..+|.....++... ..+..++|.|.|.| .|++ +|+|.+ ||+.+.
T Consensus 94 ~~~P~v~v~~~~~~--~~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 139 (190)
T 3c5j_B 94 RVHPQVTVYPAKTQ--PLQHHNLLVCSVSGFYPGSIEVRWFR-NGQEEK 139 (190)
T ss_dssp CBCCEEEEEEEC-------CCCEEEEEEEEEBSSCCEEEEEE-TTEECS
T ss_pred ccCceEEEEeCCcc--ccCCceEEEEEEeeEECCceEEEEEE-CCeEcC
Confidence 34566555543332 23456899999999 5765 999996 888764
No 448
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=97.13 E-value=0.00032 Score=46.06 Aligned_cols=31 Identities=16% Similarity=0.373 Sum_probs=27.3
Q ss_pred CCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 25 PPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
+|..+.+..|++++|.|.+.+.|.+.|.|++
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQ 37 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEE
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEE
Confidence 3566677889999999999999999999987
No 449
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=97.13 E-value=0.00047 Score=40.46 Aligned_cols=32 Identities=19% Similarity=0.460 Sum_probs=26.5
Q ss_pred CCcEEecCCCCeEEEEE-EcccC-CCeEEEEeCC
Q psy11558 26 PNRIDFSNTTGAQVECT-ARGSP-NPEIIWIRSD 57 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~-A~G~P-~P~I~W~~~d 57 (74)
|..+...+|++++|.|. +++.| .+.|.|++.+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~ 40 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQR 40 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEEC
Confidence 35667889999999999 99887 6899999865
No 450
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=97.12 E-value=0.00054 Score=44.19 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=26.9
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
.+|+. +.+..|++++|.|.+.|.| .+.|.|++.
T Consensus 5 ~q~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (220)
T 2fbj_H 5 LESGG-GLVQPGGSLKLSCAASGFDFSKYWMSWVRQ 39 (220)
T ss_dssp EEECC-EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ecCCC-eEecCCCcEEEEEEecCccCCCceEEEEEE
Confidence 44444 5678899999999999987 799999875
No 451
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=97.12 E-value=0.00022 Score=45.50 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=26.1
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCe
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGT 59 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~ 59 (74)
..|.+...++.. ....|..+.|.|.|.|.|+| +++|.+ ||.
T Consensus 119 ~~P~i~~~~~~~-~~~~g~~v~l~C~~~~~~p~~~~v~W~~-~g~ 161 (215)
T 3nl4_H 119 KAPSVFPLAPCC-GDTPSSTVTLGCLVKGYLPEPVTVTWNS-GTL 161 (215)
T ss_dssp BCCEEEEECCCT-TCCC--CEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred CCCEEEEecCCc-cccCCCcEEEEEEEeeeeCCCeEEEEee-CCE
Confidence 456655444443 23457789999999997644 577986 665
No 452
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.11 E-value=0.00064 Score=47.71 Aligned_cols=28 Identities=18% Similarity=0.572 Sum_probs=23.4
Q ss_pred cCCCCeEEEEEEccc-CCC-eEEEEeCCCee
Q psy11558 32 SNTTGAQVECTARGS-PNP-EIIWIRSDGTA 60 (74)
Q Consensus 32 ~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~ 60 (74)
..|+.++|.|.|.|. |.| +|+|++ ||..
T Consensus 132 ~~G~~v~L~C~~~g~~P~p~~v~W~k-~~~~ 161 (434)
T 1igy_B 132 QTNSMVTLGCLVKGYFPEPVTVTWNS-GSLS 161 (434)
T ss_dssp CCTTEEEEEEEEEEEBSSCCEEEETT-TTBC
T ss_pred CCCCcEEEEEEEeeecCCCeEEEEee-CCcC
Confidence 567789999999997 888 999986 5654
No 453
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.10 E-value=0.00055 Score=44.82 Aligned_cols=34 Identities=9% Similarity=0.337 Sum_probs=26.7
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+.+|+. +.+.+|++++|.|.+.|.| .|.|.|++.
T Consensus 6 v~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3umt_A 6 LQQSGL-ELVKPGASVKISCKTSGYTFTEYTMHWVKQ 41 (256)
T ss_dssp EEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEccCc-eEEcCCCCEEEEEEEecccccccEEEEEEE
Confidence 334444 4578899999999999987 899999873
No 454
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.09 E-value=0.00037 Score=46.89 Aligned_cols=42 Identities=17% Similarity=0.375 Sum_probs=27.3
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEccc-CCC-eEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGS-PNP-EIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~-P~P-~I~W~~~dG~~i 61 (74)
+|.....++... ...|..++|.|.|.|. |.| +|+|.+ ||..+
T Consensus 129 ~P~v~~~~p~~~-v~~g~~v~L~C~~~g~~P~~i~v~W~k-~g~~~ 172 (261)
T 2xqy_G 129 APSVYPLAPVCG-DTTGSSVTLGCLVKGYFPEPVTLTWNS-GSLSS 172 (261)
T ss_dssp CCEEEEECCCCC---CCSEEEEEEEEEEEBSSCCEEEEGG-GTCCT
T ss_pred CCeEEEeCCCcc-ccCCCcEEEEEEEEeEeCCCCEEEEec-CCCcC
Confidence 354443333321 3457789999999995 888 999986 56543
No 455
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} SCOP: b.1.1.0 PDB: 3p77_B* 4g43_B 4g42_B 4e0r_B 3bev_B 3bew_B 3jvg_C* 2yez_B 2yf5_B 2yf6_B 2yf1_B*
Probab=97.08 E-value=0.0016 Score=38.81 Aligned_cols=29 Identities=28% Similarity=0.483 Sum_probs=22.5
Q ss_pred CCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 33 NTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 33 ~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
.|..++|.|.|.|--++ +|+|.+ ||+.+.
T Consensus 17 ~~~~~~L~C~~~gFyP~~i~v~W~~-~g~~~~ 47 (99)
T 3p73_B 17 AGTKNVLNCFAAGFHPPKISITLMK-DGVPME 47 (99)
T ss_dssp TTSCEEEEEEEEEESSSCCEEEEEE-TTEECT
T ss_pred CCCCEEEEEEEeeeECCCeEEEEEE-CCeeCC
Confidence 35569999999996443 899996 788763
No 456
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.08 E-value=0.00061 Score=44.50 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=31.4
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCC-CeEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN-PEIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~-P~I~W~~~dG~~i 61 (74)
+|.+...|... .+..|+.+.|.|.|.|.|. +.+.|.+ ||..+
T Consensus 186 ~p~i~~~~~~~-~~~~g~~v~l~C~~~~~~~~~~~~w~~-~~~~~ 228 (292)
T 4dkd_C 186 PPALTLVPAEL-VRIRGEAAQIVCSASSVDVNFDVFLQH-NNTKL 228 (292)
T ss_dssp SCEEEEESSCB-CCCSSSCEEEEEEEEESSSCCEEECCB-SSCCC
T ss_pred CCeEEccCCce-eEecCCCEEEEEEecCCCCceEEEEeC-CCccc
Confidence 78888876544 3457888999999999885 5688875 56544
No 457
>1uvq_B HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_B* 1jk8_B* 2nna_B 1s9v_B 2iad_B 1muj_B* 1d9k_D* 1iak_B* 1jl4_B 1f3j_B* 2pxy_D 1k2d_B* 1u3h_D 2z31_D 3mbe_B* 1aqd_B 3pdo_B 3pgc_B 3pgd_B 1klu_B ...
Probab=97.06 E-value=0.00086 Score=43.94 Aligned_cols=43 Identities=14% Similarity=0.357 Sum_probs=26.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
.+|.....++... ..+..++|.|.|.| .|++ +|+|.+ ||+.+.
T Consensus 93 ~~P~V~v~~~~~~--~~~~~~~L~C~v~gFyP~~i~v~W~~-~g~~~~ 137 (198)
T 1uvq_B 93 VEPTVTISPSRTE--ALNHHNLLVCSVTDFYPGQIKVRWFR-NDQEET 137 (198)
T ss_dssp BCCEEEEEEC----------CEEEEEEEEEBSSCCEEEEEE-TTEEEC
T ss_pred ccceEEEEecCcc--cCCCCcEEEEEEeeEeCCceEEEEEE-CCEecc
Confidence 4676665544332 23456999999999 5765 899996 788763
No 458
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=97.06 E-value=0.00057 Score=45.53 Aligned_cols=34 Identities=15% Similarity=0.358 Sum_probs=26.5
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccCC--CeEEEEeCC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRSD 57 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P~--P~I~W~~~d 57 (74)
..++.. .+..|+.++|.|.+.|.|. |.|.|++.+
T Consensus 143 ~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 178 (264)
T 2gjj_A 143 QQSGPE-VVKTGASVKISCKASGYSFTGYFINWVKKN 178 (264)
T ss_dssp EECCCE-EECTTCCEEEEEEEESSCGGGSEEEEEEEC
T ss_pred eCCCCE-EEcCCCcEEEEEEEeCCccCCeEEEEEEEC
Confidence 333444 4678889999999999985 999999853
No 459
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.06 E-value=0.0005 Score=46.58 Aligned_cols=41 Identities=12% Similarity=0.197 Sum_probs=31.7
Q ss_pred CccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCee
Q psy11558 16 TLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTA 60 (74)
Q Consensus 16 ~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~ 60 (74)
..+|.+...|. . .+..|+.++|.|.+.+ +.+.++|+| ||..
T Consensus 5 ~~kP~i~~~P~-~-~V~~G~~VtL~C~~~~-~~~~~~W~k-~g~~ 45 (257)
T 1b6u_A 5 HRKPSLLAHPG-P-LVKSEETVILQCWSDV-RFQHFLLHR-EGKF 45 (257)
T ss_dssp CCCCEECCBSC-S-EEESSCCEEEEEEESS-CCSEEEEEE-ESTT
T ss_pred CCCCEEEEcCC-C-EecCCCCEEEEEecCC-CCcEEEEEE-CCCC
Confidence 46788888865 3 3567888999999986 689999997 5543
No 460
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=97.06 E-value=4.2e-05 Score=49.43 Aligned_cols=33 Identities=21% Similarity=0.438 Sum_probs=25.5
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccCC---CeEEE
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIW 53 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~---P~I~W 53 (74)
++++. |..+.+..|++++|.|.|.|.+. ++|+|
T Consensus 6 v~~~~-P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W 41 (214)
T 1ow0_A 6 LSLHR-PALEDLLLGSEANLTCTLTGLRDASGVTFTW 41 (214)
T ss_dssp CEEEC-CCHHHHHHCSSCCCEEEETTCCSCCCCCCCB
T ss_pred EEEEC-cChHHhccCCCcEEEEEEeeeECCCCeEEEE
Confidence 34554 55555678889999999999865 79999
No 461
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=97.06 E-value=0.00069 Score=39.98 Aligned_cols=32 Identities=19% Similarity=0.491 Sum_probs=26.4
Q ss_pred CCcEEecCCCCeEEEEEEccc-CCCeEEEEeCC
Q psy11558 26 PNRIDFSNTTGAQVECTARGS-PNPEIIWIRSD 57 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G~-P~P~I~W~~~d 57 (74)
|..+...+|++++|.|.+++. +.+.|.|++.+
T Consensus 5 p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~ 37 (115)
T 2atp_B 5 PSSLLVQTNHTAKMSCEVKSISKLTSIYWLRER 37 (115)
T ss_dssp CSEEEECTTSCEEEEEECCSSCCSSEEEEEEEE
T ss_pred CCCEEEcCCCcEEEEEEecCCCCcccEEEEEeC
Confidence 456667889999999999986 68899998753
No 462
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=97.06 E-value=0.00065 Score=45.68 Aligned_cols=37 Identities=14% Similarity=0.360 Sum_probs=29.7
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
..+++|+ .+.+..|++++|.|.+.|.| .+.|.|++.+
T Consensus 8 ~~~~~p~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 46 (261)
T 2xqy_G 8 VQLQQPG-AELVKPGASVKMSCKASGYSFTSYWMNWVKQR 46 (261)
T ss_dssp CEEECCS-EEEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred eeEECCC-CEEEcCCCCEEEEEEeCCcccCCceEEEEEeC
Confidence 3455654 55688899999999999998 7999998754
No 463
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=97.06 E-value=0.00055 Score=45.71 Aligned_cols=35 Identities=11% Similarity=0.302 Sum_probs=28.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCC-----eEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNP-----EIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P-----~I~W~~~ 56 (74)
+++.| ..+....|++++|.|.+.|.|.| .|+|.++
T Consensus 3 vv~~P-~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~ 42 (313)
T 4fqp_A 3 VVQAP-TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARH 42 (313)
T ss_dssp EEECC-SEECCBTTSCEEECCEEECCTTSCCCCCEEEEEET
T ss_pred EEcCC-CEEEEecCCCEEEEEEEECCCCCccceEEEEEEEC
Confidence 45664 55667788899999999999988 4999974
No 464
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.03 E-value=0.0026 Score=41.35 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=27.1
Q ss_pred CCCcEEecCCCCeEEEEEEccc--CCCeEEEEeC
Q psy11558 25 PPNRIDFSNTTGAQVECTARGS--PNPEIIWIRS 56 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~ 56 (74)
+|..+....|++++|.|.+.|. +.+.|.|++.
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 40 (230)
T 1ypz_F 7 PEISISRPRDETAQISCKVFIESFRSVTIHWYRQ 40 (230)
T ss_dssp SCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEE
T ss_pred cCCEEEEeCCCcEEEEEEeeccccCccEEEEEEE
Confidence 4566678889999999999996 7899999875
No 465
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.02 E-value=0.0023 Score=37.66 Aligned_cols=33 Identities=21% Similarity=0.478 Sum_probs=26.3
Q ss_pred EcCCCcEEecCCCCeEEEEEEccc---CCCeEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGS---PNPEIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~---P~P~I~W~~~ 56 (74)
.+|+ .+...+|++++|.|.+.+. +.+.|.|++.
T Consensus 3 ~q~~-~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq 38 (116)
T 3bj9_1 3 HQPP-AMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQ 38 (116)
T ss_dssp ECCS-EEEEETTCCEEEEEEECSSSCGGGCCEEEEEE
T ss_pred ecCC-cEEEcCCCcEEEEEEeecCccCCCceEEEEEe
Confidence 3455 4678889999999999875 6789999874
No 466
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=97.01 E-value=0.0026 Score=40.07 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=29.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.++. |..+...+|++++|.|.+++.+.+.|.|++.
T Consensus 3 v~Q~-p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq 37 (143)
T 3u6r_L 3 LTQS-PATLSLSPGERATLSCRASQSVNKYLAWYQQ 37 (143)
T ss_dssp EEEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred EEEC-CCEEEEeCCCCEEEEEEECCCCceeeEEEEE
Confidence 3455 5666788999999999999998899999984
No 467
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=97.01 E-value=0.0014 Score=43.81 Aligned_cols=41 Identities=17% Similarity=0.294 Sum_probs=30.3
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCCCeee
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG~~i 61 (74)
.+|.+...|... +..|+.++|.|.|.+ |.|.++|.+ ||..+
T Consensus 218 ~~p~i~~~~~~~--v~~G~~v~L~C~~~~-~~~~~~W~k-~g~~~ 258 (316)
T 3vh8_G 218 EKPSLSAQPGPK--VQAGESVTLSCSSRS-SYDMYHLSR-EGGAH 258 (316)
T ss_dssp CCCEEEEESCSC--CCTTSCCEEEEEESS-CCSEEEEEE-TTSSC
T ss_pred CCCeEEeCCCCe--ecCCCcEEEEEECCC-CCcEEEEEE-CCCcC
Confidence 456666665432 467888999999985 889999997 56543
No 468
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=97.01 E-value=0.00074 Score=41.22 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=27.8
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEccc--CCCeEEEEeCC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGS--PNPEIIWIRSD 57 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~--P~P~I~W~~~d 57 (74)
+++. |..+...+|++|+|.|.+++. +.+.|.|++.+
T Consensus 3 v~Q~-p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~ 40 (121)
T 2i24_N 3 VDQT-PQRITKETGESLTINCVVRDSRCVLSTGYWYRKP 40 (121)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEECSCCCCEEEEEEEEEC
T ss_pred cEEC-CcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeC
Confidence 3455 455667889999999999987 46789999753
No 469
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=97.01 E-value=0.00036 Score=45.85 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=28.5
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEe
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIR 55 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~ 55 (74)
..+.+++. +..+.+..|++++|.|.+. .|.+.|+|++
T Consensus 25 ~~~~v~~~-p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r 61 (268)
T 3pl6_D 25 GGAGVSQT-PSNKVTEKGKYVELRCDPI-SGHTALYWYR 61 (268)
T ss_dssp --SSCBCC-CSEEEEETTCCEEEEEBCB-TTCCEEEEEE
T ss_pred cCceeEeC-CCEEEecCCCCEEEEEEeC-CCCceEEEEE
Confidence 34455555 5666778899999999998 6999999998
No 470
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.00 E-value=0.00063 Score=47.88 Aligned_cols=39 Identities=23% Similarity=0.437 Sum_probs=27.4
Q ss_pred eEEEcCCCcEE-ecCCCCeEEEEEEccc-CCC---eEEEEeCCCe
Q psy11558 20 IFIKEPPNRID-FSNTTGAQVECTARGS-PNP---EIIWIRSDGT 59 (74)
Q Consensus 20 ~fv~~Pp~~v~-~~~g~~v~L~C~A~G~-P~P---~I~W~~~dG~ 59 (74)
+|+.. ++... +..|++++|.|.|.|. |.| +|+|+++++.
T Consensus 169 v~~~~-p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~ 212 (376)
T 2aty_A 169 VFIFP-PKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE 212 (376)
T ss_pred EEEeC-cCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCcc
Confidence 44554 44322 5567789999999999 544 6999986544
No 471
>1uvq_A HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_A* 4d8p_A 1s9v_A 2nna_A 1jk8_A*
Probab=96.99 E-value=0.0017 Score=43.12 Aligned_cols=43 Identities=16% Similarity=0.281 Sum_probs=29.7
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
.+|.....++... ..+..++|.|.|.| .|++ +|+|.+ ||+.+.
T Consensus 88 ~~P~V~v~~~~~~--~~~~~~tL~C~a~gFyP~~i~v~W~k-ng~~~~ 132 (197)
T 1uvq_A 88 EVPEVTVFSKSPV--TLGQPNTLICLVDNIFPPVVNITWLS-NGQSVT 132 (197)
T ss_dssp CCCEEEEEESSCC--CTTSCEEEEEEEEEECSSCCEEEEEE-TTEEEC
T ss_pred CCCCcccccCCcc--ccCCccEEEEEEEeEcCCCCEEEEEE-CCEEcc
Confidence 4565555544332 23556999999999 6765 899996 888774
No 472
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=96.97 E-value=0.00064 Score=42.83 Aligned_cols=30 Identities=23% Similarity=0.495 Sum_probs=25.9
Q ss_pred cCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
+|+ .+.+..|+.++|.|.+. |.|.|+|++.
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~ 35 (211)
T 3tv3_L 6 QPP-SASGSPGQSITISCTGT--SNNFVSWYQQ 35 (211)
T ss_dssp CCS-EEEECTTCEEEEEEECC--CSSCEEEEEE
T ss_pred eCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEE
Confidence 445 67788899999999999 9999999984
No 473
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=96.97 E-value=0.00078 Score=44.41 Aligned_cols=41 Identities=17% Similarity=0.411 Sum_probs=26.5
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCe
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGT 59 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~ 59 (74)
..|.+...++.. ....|..+.|.|.|.| .|.| +|+|.+ ||.
T Consensus 123 ~~P~i~~~~~~~-~~~~g~~v~L~C~~~g~~P~~~~v~W~~-~~~ 165 (253)
T 3liz_H 123 TPPSVYPLAPGS-AAQTNSMVTLGCLVKGYFPEPVTVTWNS-GSL 165 (253)
T ss_dssp BCCEEEEECC-------CCEEEEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred CCCeEEEecCCc-ccCCCCcEEEEEEEeeEeCCCeEEEEEe-CCe
Confidence 455555443433 2335777999999999 8888 999986 565
No 474
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=96.94 E-value=0.0033 Score=38.36 Aligned_cols=36 Identities=14% Similarity=0.479 Sum_probs=28.8
Q ss_pred ceEEEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 19 PIFIKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 19 P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
|+.++ |+ .+.+.+|++|+|.|.+++.+ .+.+.|++.
T Consensus 2 p~v~Q-p~-~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq 39 (123)
T 3t0v_A 2 PVLTQ-SP-SVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQ 39 (123)
T ss_dssp CSBEE-CC-CEEECTTCCEEEEEECCTTTTTTSCEEEEEE
T ss_pred CccCc-cC-eEEEcCCCCEEEEEecCCCccCCCeEEEEEE
Confidence 56666 54 56688999999999999876 478999974
No 475
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=96.94 E-value=0.00069 Score=40.47 Aligned_cols=32 Identities=9% Similarity=0.285 Sum_probs=26.8
Q ss_pred cCCCcEEecCCCCeEEEEEEcccC---CCeEEEEeC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSP---NPEIIWIRS 56 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P---~P~I~W~~~ 56 (74)
+|+. +...+|++++|.|.+.+.+ .+.+.|++.
T Consensus 6 q~~~-~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq 40 (120)
T 1oaq_L 6 QESA-LTTSPGETVTLTCRSSTGAVTTSNYANWVQE 40 (120)
T ss_dssp ECSE-EEECTTCEEEEEEEETTBCCCGGGCCEEEEE
T ss_pred cCCc-EEEcCCCCEEEEEEeCCCccCCCCEEEEEEe
Confidence 3455 7788999999999999987 789999874
No 476
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=96.94 E-value=0.0023 Score=39.63 Aligned_cols=45 Identities=24% Similarity=0.303 Sum_probs=30.2
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeeec
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAVG 62 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i~ 62 (74)
...+|.....+++.. ..|..++|.|.|.|-.++ +|+|.+ ||+.+.
T Consensus 21 ~~~~P~V~v~~~~~~--~~g~~~~L~C~v~gFyP~~I~v~W~k-nG~~~~ 67 (119)
T 3o81_A 21 ADLTPKVQVYSRFPA--SAGTKNVLNCFAAGFHPPKISITLMK-DGVPME 67 (119)
T ss_dssp CCCSCEEEEEESSCC--CTTSCEEEEEEEEEESSSCCEEEEEE-TTEECT
T ss_pred CccCCceEEEcCCcc--cCCCcEEEEEEEecccCCCcEEEEEE-CCEECC
Confidence 345666555433332 245569999999997655 799996 788763
No 477
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=96.93 E-value=0.00081 Score=43.11 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=26.1
Q ss_pred cCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
+|+ .+.+..|++++|.|.+.|.| .+.|.|++.+
T Consensus 6 qp~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (215)
T 1c5d_H 6 ESG-PGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQP 40 (215)
T ss_dssp EEC-CCEECTTCCEEEEEEECSSCTTSCCEEEEEEC
T ss_pred cCC-CeeecCCCcEEEEEEECCCcCCCCeEEEEEEC
Confidence 344 34577888999999999986 6999998753
No 478
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=96.93 E-value=0.0011 Score=38.45 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=24.2
Q ss_pred EEecCCCCeEEEEEEcccCCCe-----EEEEeCCC
Q psy11558 29 IDFSNTTGAQVECTARGSPNPE-----IIWIRSDG 58 (74)
Q Consensus 29 v~~~~g~~v~L~C~A~G~P~P~-----I~W~~~dG 58 (74)
+....|+++.|.|.+.+.|.+. |.|++.+.
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~ 38 (110)
T 1ncn_A 4 IQAYFNETADLPCQFANSQNQSLSELVVFWQDQEN 38 (110)
T ss_dssp EEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTC
T ss_pred EEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCC
Confidence 4566788999999999888764 99998643
No 479
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=96.93 E-value=0.00097 Score=40.12 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=28.4
Q ss_pred eEEEcCCCcEEecCCCCeEEEEEEc-------ccCCCeEEEEeCC
Q psy11558 20 IFIKEPPNRIDFSNTTGAQVECTAR-------GSPNPEIIWIRSD 57 (74)
Q Consensus 20 ~fv~~Pp~~v~~~~g~~v~L~C~A~-------G~P~P~I~W~~~d 57 (74)
..++. |..+....|+.|+|.|..+ +.+.+.|.|++.+
T Consensus 8 ~~~q~-p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~ 51 (132)
T 1nko_A 8 YSLTM-QSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAG 51 (132)
T ss_dssp CEEEE-CSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-
T ss_pred eEEeC-CCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECC
Confidence 34455 5567788899999999998 4577899999854
No 480
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=96.91 E-value=0.00089 Score=43.24 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=27.3
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~d 57 (74)
+.+|+ .+.+..|++|+|.|.+.|.| .+.|.|++.+
T Consensus 4 v~qp~-~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~ 40 (223)
T 1dee_B 4 LVESG-GGVVQPGKSLRLSCAASGFTFSGYGMHWVRQA 40 (223)
T ss_dssp EEEEC-CCEECTTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred EEcCC-CEEEcCCCcEEEEEEecCcccCCceEEEEEEC
Confidence 34443 45677899999999999987 5999999753
No 481
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=96.91 E-value=0.0043 Score=36.65 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=25.6
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
.+|+. +...+|++|+|.|.+.+.+ .+.|.|++.
T Consensus 5 ~q~~~-~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (116)
T 1a2y_B 5 QESGP-GLVAPSQSLSITCTVSGFSLTGYGVNWVRQ 39 (116)
T ss_dssp EEECC-SEECTTSCEEEEEEEESSCTTSSEEEEEEE
T ss_pred EcCCC-EEEeCCCcEEEEEEEcCCCcCCcEEEEEEe
Confidence 33444 4578899999999999865 489999875
No 482
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=96.90 E-value=0.002 Score=41.00 Aligned_cols=32 Identities=16% Similarity=0.461 Sum_probs=27.5
Q ss_pred CcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCC
Q psy11558 27 NRIDFSNTTGAQVECTARG-SPNPEIIWIRSDG 58 (74)
Q Consensus 27 ~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG 58 (74)
+.-.+..|.+..|+|.+.| .+.|+++|-+-+|
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~ 51 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRPHVTWCKLNG 51 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCCEEEEEEECS
T ss_pred ccceEecCCeEEEEccEEeccCCCceEEEecCC
Confidence 3344567888999999999 7999999999888
No 483
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=96.89 E-value=0.0014 Score=42.58 Aligned_cols=34 Identities=15% Similarity=0.364 Sum_probs=27.2
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeCC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSD 57 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~d 57 (74)
++. |..+.+..|++++|.|.+.+ +.|.|.|++.+
T Consensus 3 ~q~-p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~ 36 (238)
T 1bec_A 3 TQS-PRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQD 36 (238)
T ss_dssp EEE-CSEEEEETTCCEEEEEEESS-CCSEEEEEEEC
T ss_pred ccC-CCeeEEeCCCcEEEEEEeCC-CCceEEEEEEC
Confidence 454 56667788999999999965 79999999854
No 484
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=96.89 E-value=0.00063 Score=43.28 Aligned_cols=33 Identities=3% Similarity=0.205 Sum_probs=25.8
Q ss_pred CCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCCC
Q psy11558 26 PNRIDFSNTTGAQVECTARG-SPNPEIIWIRSDG 58 (74)
Q Consensus 26 p~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~dG 58 (74)
...+...+|++|+|+|.+.+ .+.|.|+|++.++
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~ 39 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTN 39 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSS
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCC
Confidence 44566778999999999976 4589999998533
No 485
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=96.87 E-value=0.0015 Score=43.16 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=27.0
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCC--CeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPN--PEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~--P~I~W~~~ 56 (74)
++..| ....+.+|+.++|.|.+.|.|. |.|.|++.
T Consensus 154 ~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 154 KLDET-GGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp EEEEE-CCEEECTTCCEEEEEEEESSCGGGCEEEEEEE
T ss_pred EEECC-CceEecCCCcEEEEEEecCccccccEEEEEEe
Confidence 34443 3446778889999999999874 99999874
No 486
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=96.87 E-value=0.00065 Score=43.93 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.0
Q ss_pred EcCCCcEEecCCCCeEEEEEEcccCC----CeEEEEeCC
Q psy11558 23 KEPPNRIDFSNTTGAQVECTARGSPN----PEIIWIRSD 57 (74)
Q Consensus 23 ~~Pp~~v~~~~g~~v~L~C~A~G~P~----P~I~W~~~d 57 (74)
.+|+. +.+..|++++|.|.+.|.|. +.|+|++.+
T Consensus 5 ~qp~~-~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~ 42 (228)
T 3bae_H 5 KESGP-GLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQP 42 (228)
T ss_dssp EEECC-SEECTTCCEEEEEEEESSCHHHHCCEEEEEEEE
T ss_pred eCCCc-eeecCCCeEEEEEEEeCcccCCCceeEEEEEEC
Confidence 34443 45778889999999999986 999998753
No 487
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=96.86 E-value=0.0062 Score=36.18 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=27.3
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC-CCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP-NPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P-~P~I~W~~~ 56 (74)
++. |..+...+|++++|.|.+.+.+ .+.+.|++.
T Consensus 3 ~q~-p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq 37 (117)
T 3bp6_A 3 TFY-PAWLTVSEGANATFTCSLSNWSEDLMLNWNRL 37 (117)
T ss_dssp EEE-CSEEEECTTCCEEEEEEESSCCTTCEEEEEEE
T ss_pred eec-CCcEEEeCCCCEEEEeEeecCCCCCEEEEEEe
Confidence 455 4556678899999999999875 689999974
No 488
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=96.86 E-value=0.0019 Score=41.68 Aligned_cols=33 Identities=15% Similarity=0.462 Sum_probs=26.5
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
++. |..+.+..|++++|.|.+.+.+ +.|.|++.
T Consensus 5 ~q~-p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~ 37 (207)
T 1ypz_E 5 EQS-PSALSLHEGTDSALRCNFTTTM-RSVQWFRQ 37 (207)
T ss_dssp EES-CSEEEEETTCCEEEEEEESSCC-SEEEEEEE
T ss_pred EEC-CCeEEEccCCcEEEEEEEeCCC-eEEEEEEe
Confidence 444 5666778899999999999865 69999875
No 489
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=96.85 E-value=0.00051 Score=43.41 Aligned_cols=30 Identities=13% Similarity=0.220 Sum_probs=24.2
Q ss_pred cEEecCCCCeEEEEEEcccCCCeEEEEeCCC
Q psy11558 28 RIDFSNTTGAQVECTARGSPNPEIIWIRSDG 58 (74)
Q Consensus 28 ~v~~~~g~~v~L~C~A~G~P~P~I~W~~~dG 58 (74)
.+....|++|+|+|.+.+ |.|.|+|++.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~ 33 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKD 33 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTE
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCc
Confidence 345667889999999966 999999998543
No 490
>1iak_A MHC class II I-AK; histocompatibility antigen, peptide complex, histocompa antigen I-AK; HET: NAG; 1.90A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1d9k_C* 1k2d_A* 1jl4_A 2pxy_C 1u3h_C 2z31_C 1muj_A* 1lnu_A* 3c5z_C 3c60_C 3c6l_C 3rdt_C 2iad_A 1iao_A 1es0_A 3cup_A* 3mbe_A* 1f3j_A*
Probab=96.85 E-value=0.0024 Score=42.37 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=29.2
Q ss_pred ccceEEEcCCCcEEecCCCCeEEEEEEcc-cCCC-eEEEEeCCCeeec
Q psy11558 17 LGPIFIKEPPNRIDFSNTTGAQVECTARG-SPNP-EIIWIRSDGTAVG 62 (74)
Q Consensus 17 ~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G-~P~P-~I~W~~~dG~~i~ 62 (74)
.+|.....++... ..+..++|.|.|.| .|++ +|+|.+ ||+.+.
T Consensus 89 ~~P~V~v~~~~~~--~~~~~~tL~C~a~gFyP~~i~v~W~k-ng~~~~ 133 (199)
T 1iak_A 89 EAPQATVFPKSPV--LLGQPNTLICFVDNIFPPVINITWLR-NSKSVT 133 (199)
T ss_dssp CCCEEEEEESSCC--CTTSCEEEEEEEEEECSSCCEEEEEE-TTEECC
T ss_pred cCCCcccccCCcc--ccCCCcEEEEEEeeEeCCCcEEEEEE-CCEEcc
Confidence 4565554433322 23556999999999 6765 899996 888764
No 491
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=96.83 E-value=0.0024 Score=39.54 Aligned_cols=44 Identities=14% Similarity=0.198 Sum_probs=29.6
Q ss_pred CCccceEEEcCCCcEEecCCCCeEEEEEEcccCCC--eEEEEeCCCeee
Q psy11558 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNP--EIIWIRSDGTAV 61 (74)
Q Consensus 15 ~~~~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P--~I~W~~~dG~~i 61 (74)
...+|.....+++.. ..|..++|.|.|.|--++ +|+|.+ ||+.+
T Consensus 21 ~~~~P~V~v~~~~~~--~~g~~~~L~C~~~gFyP~~I~v~W~k-nG~~~ 66 (119)
T 3jts_B 21 IQRTPKIQVYSRHPA--ENGKSNFLNCYVSGFHPSDIEVDLLK-NGERI 66 (119)
T ss_dssp CCBCCEEEEEESSCC--CTTSCEEEEEEEEEEBSSCCEEEEEE-TTEEC
T ss_pred CccCCEEEEEccCcc--cCCCcEEEEEEEeCccCCCEEEEEEE-CCEEC
Confidence 345676555333322 345569999999996444 899996 78876
No 492
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=96.79 E-value=0.0048 Score=40.71 Aligned_cols=35 Identities=14% Similarity=0.387 Sum_probs=28.3
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.++. |..+.+.+|++++|.|.+++.+.+.+.|++.
T Consensus 6 v~Q~-p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq 40 (210)
T 2eys_A 6 VEQS-PQSLIILEGKNCTLQCNYTVSPFSNLRWYKQ 40 (210)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEECCSSCCEEEEEEE
T ss_pred EEEe-CCEEEEecCCCEEEEEEECCCCCCeEEEEEe
Confidence 3444 4556678899999999999988889999974
No 493
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=96.79 E-value=0.0071 Score=35.80 Aligned_cols=34 Identities=9% Similarity=0.277 Sum_probs=26.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+..|+. +...+|++|+|.|...+.+ .+.|.|++.
T Consensus 4 v~qp~~-~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (120)
T 1n4x_H 4 LQQSGP-ELKKPGETVKISCKATNYAFTDYSMHWVKQ 39 (120)
T ss_dssp EEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EECCCC-EEEcCCCeEEEEEEecCcccCCcEEEEEEE
Confidence 345554 6678899999999999854 678999875
No 494
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=96.79 E-value=0.0011 Score=38.57 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=27.1
Q ss_pred CCCcEEecCCCCeEEEEEEcc-cCCCeEEEEeCC
Q psy11558 25 PPNRIDFSNTTGAQVECTARG-SPNPEIIWIRSD 57 (74)
Q Consensus 25 Pp~~v~~~~g~~v~L~C~A~G-~P~P~I~W~~~d 57 (74)
|+..+....|++++|.|...+ .+.+.|.|++.+
T Consensus 3 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~ 36 (116)
T 2or8_A 3 SYVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQ 36 (116)
T ss_dssp CCEEEEEETTSCEEECCBCCCTTCCCCEEEEESC
T ss_pred CcceEEEEeCCcEEEEEEeeCCCCCcEEEEEEEC
Confidence 566777888999999999987 457889999864
No 495
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=96.78 E-value=0.0023 Score=47.27 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=30.6
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcc--cCCCeEEEEeCCCeee
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARG--SPNPEIIWIRSDGTAV 61 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G--~P~P~I~W~~~dG~~i 61 (74)
.|.+...|+..+.+..|+.++|.|.+.| .|.++++|.+ +|..+
T Consensus 223 ~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~-~~~~~ 267 (772)
T 3v2a_R 223 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY-PSSKH 267 (772)
T ss_dssp EEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEEC-C----
T ss_pred cceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEec-CCccC
Confidence 4455666666566778989999999999 5678899997 55543
No 496
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=96.78 E-value=0.0063 Score=36.28 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=26.6
Q ss_pred EEcCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 22 IKEPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 22 v~~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
+.+|+ .+...+|++|+|.|...|.+ .+.|.|++.
T Consensus 4 l~q~~-~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq 39 (121)
T 1kxv_C 4 LVESG-GGTVPAGGSLRLSCAASGNTLCTYDMSWYRR 39 (121)
T ss_dssp EEEEC-CEEECTTCCEEEEEEEESCTTCCEEEEEEEE
T ss_pred EEcCC-CEEEcCCCcEEEEEEecCCCcCceEEEEEEe
Confidence 34454 45678899999999999865 678999875
No 497
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=96.78 E-value=0.00053 Score=42.90 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=26.2
Q ss_pred EEecCCCCeEEEEEEc----ccCCCeEEEEeCCCeee
Q psy11558 29 IDFSNTTGAQVECTAR----GSPNPEIIWIRSDGTAV 61 (74)
Q Consensus 29 v~~~~g~~v~L~C~A~----G~P~P~I~W~~~dG~~i 61 (74)
+.+..|+.+.|.|.+. |.|.|.+.|.+ +|..+
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~-~~~~i 39 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQK-EKKMV 39 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEE-TTEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEe-CCcEE
Confidence 4566788999999995 67899999997 67665
No 498
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=96.77 E-value=0.0015 Score=46.59 Aligned_cols=36 Identities=22% Similarity=0.380 Sum_probs=26.0
Q ss_pred cceEEEcCCCcEEecCCCCeEEEEEEcccCC---CeEEE
Q psy11558 18 GPIFIKEPPNRIDFSNTTGAQVECTARGSPN---PEIIW 53 (74)
Q Consensus 18 ~P~fv~~Pp~~v~~~~g~~v~L~C~A~G~P~---P~I~W 53 (74)
+|.+...||....+..|+.+.|.|.|.|.|+ ++|+|
T Consensus 246 ~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 246 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred CcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE
Confidence 4554344454433467888999999999865 79999
No 499
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=96.76 E-value=0.0028 Score=37.52 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=26.4
Q ss_pred cCCCcEEecCCCCeEEEEEEcccC--CCeEEEEeC
Q psy11558 24 EPPNRIDFSNTTGAQVECTARGSP--NPEIIWIRS 56 (74)
Q Consensus 24 ~Pp~~v~~~~g~~v~L~C~A~G~P--~P~I~W~~~ 56 (74)
++|..+...+|++++|.|.+++.+ .+.+.|++.
T Consensus 4 q~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq 38 (114)
T 1u9k_A 4 LEEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRL 38 (114)
T ss_dssp -CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEEC
T ss_pred cCCccEEEeCCCcEEEEeEecCcccCCceEEEEEe
Confidence 346667788999999999999764 568999985
No 500
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=96.76 E-value=0.0069 Score=36.60 Aligned_cols=35 Identities=14% Similarity=0.280 Sum_probs=28.1
Q ss_pred EEEcCCCcEEecCCCCeEEEEEEcccCCCeEEEEeC
Q psy11558 21 FIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRS 56 (74)
Q Consensus 21 fv~~Pp~~v~~~~g~~v~L~C~A~G~P~P~I~W~~~ 56 (74)
.++. |..+...+|++++|.|..++...+.+.|++.
T Consensus 8 V~Q~-p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq 42 (125)
T 3r8b_B 8 VTQS-PRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQ 42 (125)
T ss_dssp EEEE-CSEEEEETTCCEEEEEEEESCCCSEEEEEEE
T ss_pred EEec-CCeEEEcCCCcEEEEEEECCCCCCeEEEEEE
Confidence 3444 5666678899999999999887779999974
Done!