Your job contains 1 sequence.
>psy11558
MYLSLLRLTMAAEDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTA
VGDVPGLRKYKYIF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11558
(74 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033159 - symbol:Dscam "Down syndrome cell adhesio... 239 1.8e-18 1
FB|FBgn0261046 - symbol:Dscam3 "Down syndrome cell adhesi... 154 1.9e-09 1
FB|FBgn0263219 - symbol:Dscam4 "Down syndrome cell adhesi... 134 2.4e-07 1
UNIPROTKB|C9JMQ2 - symbol:CNTN4 "Contactin-4" species:960... 86 0.00057 1
>FB|FBgn0033159 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM;ISS] [GO:0007411 "axon guidance"
evidence=IGI;IMP;TAS] [GO:0008046 "axon guidance receptor activity"
evidence=IMP;NAS] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016319 "mushroom body development"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0006909 "phagocytosis" evidence=IMP] [GO:0051635 "bacterial
cell surface binding" evidence=IDA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0030424 "axon" evidence=IDA]
[GO:0070593 "dendrite self-avoidance" evidence=IMP;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 EMBL:AE013599
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007422
GO:GO:0006909 GO:GO:0016319 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007413 GO:GO:0051635 GO:GO:0021551 GO:GO:0048846 CTD:1826
GO:GO:0070593 GeneTree:ENSGT00690000101869 GO:GO:0008046
UniGene:Dm.2832 GeneID:35652 KEGG:dme:Dmel_CG17800
FlyBase:FBgn0033159 GenomeRNAi:35652 NextBio:794432
InterPro:IPR021012 Pfam:PF12355 RefSeq:NP_001036503.1
ProteinModelPortal:Q0E9K8 SMR:Q0E9K8 STRING:Q0E9K8 PRIDE:Q0E9K8
EnsemblMetazoa:FBtr0111102 UCSC:CG17800-RAN Bgee:Q0E9K8
Uniprot:Q0E9K8
Length = 2037
Score = 239 (89.2 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 45/64 (70%), Positives = 54/64 (84%)
Query: 9 TMAA---EDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTAVGDVP 65
T+AA + D GP+F+KEP NRIDFSN+TGA++EC A G+P PEIIWIRSDGTAVGDVP
Sbjct: 26 TLAANPPDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVP 85
Query: 66 GLRK 69
GLR+
Sbjct: 86 GLRQ 89
>FB|FBgn0261046 [details] [associations]
symbol:Dscam3 "Down syndrome cell adhesion molecule 3"
species:7227 "Drosophila melanogaster" [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007156 "homophilic cell adhesion" evidence=IC] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005887 "integral to
plasma membrane" evidence=ISM] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 UniGene:Dm.16769
GeneID:42103 KEGG:dme:Dmel_CG31190 CTD:42103 FlyBase:FBgn0261046
ChiTaRS:Dscam3 GenomeRNAi:42103 NextBio:827185 RefSeq:NP_996226.1
ProteinModelPortal:Q7KSE9 SMR:Q7KSE9 PRIDE:Q7KSE9 UCSC:CG31190-RB
InParanoid:Q7KSE9 OMA:NATAYPL ArrayExpress:Q7KSE9 Bgee:Q7KSE9
Uniprot:Q7KSE9
Length = 2046
Score = 154 (59.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 31/69 (44%), Positives = 40/69 (57%)
Query: 1 MYLSLLRLTMAAEDDTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIWIRSDGTA 60
+ L++L + A P F+ EP R+ F N TGAQV CTA GSP P + W+ DG+
Sbjct: 20 LLLAVLATPLLATSGLRVPTFLLEPAPRLLFGNDTGAQVTCTAHGSPPPLVTWVLRDGSL 79
Query: 61 VGDVPGLRK 69
VPGLRK
Sbjct: 80 ATQVPGLRK 88
>FB|FBgn0263219 [details] [associations]
symbol:Dscam4 "Down syndrome cell adhesion molecule 4"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM] [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AE014296 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00690000101869
UniGene:Dm.21615 GeneID:2769008 KEGG:dme:Dmel_CG42330 CTD:2769008
FlyBase:FBgn0263219 GenomeRNAi:2769008 NextBio:849087
RefSeq:NP_001036596.2 RefSeq:NP_001137908.1 SMR:Q0E8G9
EnsemblMetazoa:FBtr0299839 EnsemblMetazoa:FBtr0299840
InParanoid:Q0E8G9 OMA:FNHRQRA Uniprot:Q0E8G9
Length = 1918
Score = 134 (52.2 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 15 DTLGPIFIKEPPNRIDFSNTTGAQVECTARGSPNPEIIW 53
D GPIF+ EPP+R++FSN +G +EC+ GSP PE+ W
Sbjct: 28 DLQGPIFLHEPPHRVEFSNNSGGLIECSGHGSPPPEVEW 66
>UNIPROTKB|C9JMQ2 [details] [associations]
symbol:CNTN4 "Contactin-4" species:9606 "Homo sapiens"
[GO:0007420 "brain development" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 EMBL:AC018842 EMBL:AC022002 EMBL:AC022008
EMBL:AC024057 EMBL:AC026882 EMBL:AC066608 EMBL:AC087094
EMBL:AC087427 HGNC:HGNC:2174 ChiTaRS:CNTN4 IPI:IPI00925010
ProteinModelPortal:C9JMQ2 SMR:C9JMQ2 STRING:C9JMQ2
Ensembl:ENST00000422330 HOGENOM:HOG000204626 ArrayExpress:C9JMQ2
Bgee:C9JMQ2 Uniprot:C9JMQ2
Length = 116
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 12 AEDDTL-GPIFIKEP-PNRIDF-SNTTGAQVECTARGSPNPEIIWIRSDGTAV 61
A+D TL GPIFI+EP P S ++ C +G+P P I W + +GT V
Sbjct: 18 ADDSTLHGPIFIQEPSPVMFPLDSEEKKVKLNCEVKGNPKPHIRW-KLNGTDV 69
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.140 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 74 74 0.00091 102 3 11 22 0.38 29
29 0.46 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 530 (56 KB)
Total size of DFA: 98 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:05
No. of threads or processors used: 24
Search cpu time: 8.09u 0.09s 8.18t Elapsed: 00:00:18
Total cpu time: 8.09u 0.09s 8.18t Elapsed: 00:00:23
Start: Thu Aug 15 13:13:09 2013 End: Thu Aug 15 13:13:32 2013