Query psy11559
Match_columns 189
No_of_seqs 217 out of 1628
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 21:34:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11559.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11559hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2b9e_A NOL1/NOP2/SUN domain fa 100.0 6.8E-32 2.3E-36 227.2 19.4 175 7-183 6-290 (309)
2 1ixk_A Methyltransferase; open 100.0 3.4E-32 1.2E-36 229.2 17.1 179 2-183 34-304 (315)
3 3m6w_A RRNA methylase; rRNA me 100.0 5.3E-32 1.8E-36 238.7 13.2 176 2-183 20-289 (464)
4 2frx_A Hypothetical protein YE 100.0 3.2E-31 1.1E-35 234.9 15.0 179 2-183 28-300 (479)
5 3m4x_A NOL1/NOP2/SUN family pr 100.0 2.7E-31 9.3E-36 233.8 11.1 172 2-183 26-292 (456)
6 3ajd_A Putative methyltransfer 100.0 3.3E-29 1.1E-33 206.8 19.2 176 3-181 1-264 (274)
7 2yxl_A PH0851 protein, 450AA l 100.0 3.9E-29 1.3E-33 219.7 18.8 177 2-183 175-438 (450)
8 1sqg_A SUN protein, FMU protei 99.9 3.4E-27 1.2E-31 206.1 16.5 170 2-183 163-418 (429)
9 4fzv_A Putative methyltransfer 99.9 5.1E-27 1.7E-31 201.0 7.9 131 2-134 37-216 (359)
10 3id6_C Fibrillarin-like rRNA/T 98.7 3E-08 1E-12 79.8 8.7 77 80-158 85-213 (232)
11 1yb2_A Hypothetical protein TA 98.2 7.1E-08 2.4E-12 78.6 -2.0 129 3-134 28-174 (275)
12 1i1n_A Protein-L-isoaspartate 98.2 2.2E-05 7.5E-10 61.3 11.2 55 80-134 86-145 (226)
13 3axs_A Probable N(2),N(2)-dime 97.4 0.00024 8.4E-09 61.1 6.3 54 80-133 61-116 (392)
14 3tfw_A Putative O-methyltransf 97.4 0.00031 1.1E-08 56.0 6.3 54 80-133 72-126 (248)
15 3k6r_A Putative transferase PH 97.4 0.0014 4.7E-08 53.8 10.2 55 80-136 134-189 (278)
16 3eey_A Putative rRNA methylase 97.3 0.00044 1.5E-08 52.5 6.6 56 80-135 31-87 (197)
17 3duw_A OMT, O-methyltransferas 97.3 0.00039 1.3E-08 53.9 6.2 54 80-133 67-121 (223)
18 3e05_A Precorrin-6Y C5,15-meth 97.3 0.00057 1.9E-08 52.3 7.0 53 80-133 49-101 (204)
19 3u81_A Catechol O-methyltransf 97.3 0.00043 1.5E-08 53.9 6.2 54 80-133 67-121 (221)
20 4df3_A Fibrillarin-like rRNA/T 97.3 0.00031 1.1E-08 56.2 5.4 53 80-134 86-138 (233)
21 3dr5_A Putative O-methyltransf 97.3 0.00047 1.6E-08 54.3 6.3 54 80-133 65-120 (221)
22 3c3y_A Pfomt, O-methyltransfer 97.2 0.00077 2.6E-08 53.4 6.8 54 80-133 79-133 (237)
23 2gpy_A O-methyltransferase; st 97.2 0.00069 2.4E-08 53.0 6.5 54 80-134 63-117 (233)
24 3r3h_A O-methyltransferase, SA 97.2 0.0001 3.4E-09 58.9 1.5 54 80-133 69-123 (242)
25 2dul_A N(2),N(2)-dimethylguano 97.2 0.00064 2.2E-08 58.1 6.6 53 80-133 56-123 (378)
26 3mb5_A SAM-dependent methyltra 97.1 0.0013 4.5E-08 52.0 7.1 55 80-134 102-157 (255)
27 3tr6_A O-methyltransferase; ce 97.1 0.001 3.5E-08 51.6 6.2 54 80-133 73-127 (225)
28 3njr_A Precorrin-6Y methylase; 97.0 0.0021 7.2E-08 49.7 7.1 51 80-133 64-115 (204)
29 3lbf_A Protein-L-isoaspartate 96.9 0.0027 9.1E-08 48.6 7.0 52 80-134 86-137 (210)
30 3c0k_A UPF0064 protein YCCW; P 96.9 0.0011 3.9E-08 56.5 5.3 71 61-133 197-282 (396)
31 1sui_A Caffeoyl-COA O-methyltr 96.9 0.0021 7.1E-08 51.3 6.5 54 80-133 88-142 (247)
32 3tma_A Methyltransferase; thum 96.8 0.0018 6.1E-08 54.2 6.2 56 80-135 212-267 (354)
33 3mti_A RRNA methylase; SAM-dep 96.8 0.0023 8E-08 47.9 6.2 51 80-133 31-81 (185)
34 1nt2_A Fibrillarin-like PRE-rR 96.8 0.0039 1.3E-07 48.5 7.3 51 80-133 66-116 (210)
35 3g89_A Ribosomal RNA small sub 96.8 0.0017 5.7E-08 52.0 5.3 54 80-134 89-142 (249)
36 3lec_A NADB-rossmann superfami 96.8 0.0072 2.5E-07 48.2 9.0 79 80-159 30-147 (230)
37 1o54_A SAM-dependent O-methylt 96.8 0.0037 1.3E-07 50.3 7.4 55 80-134 121-176 (277)
38 2fca_A TRNA (guanine-N(7)-)-me 96.8 0.0037 1.3E-07 48.5 7.1 53 80-133 47-99 (213)
39 1wxx_A TT1595, hypothetical pr 96.8 0.0013 4.6E-08 55.8 4.9 69 62-133 188-268 (382)
40 3fpf_A Mtnas, putative unchara 96.8 0.0027 9.1E-08 52.7 6.5 69 80-149 131-210 (298)
41 3ntv_A MW1564 protein; rossman 96.7 0.0033 1.1E-07 49.3 6.8 54 80-134 80-134 (232)
42 2pbf_A Protein-L-isoaspartate 96.7 0.0038 1.3E-07 48.4 7.1 55 80-134 89-152 (227)
43 2pwy_A TRNA (adenine-N(1)-)-me 96.7 0.0044 1.5E-07 48.8 7.3 55 80-134 105-160 (258)
44 2b3t_A Protein methyltransfera 96.7 0.0045 1.5E-07 49.8 7.4 53 80-133 118-170 (276)
45 3a27_A TYW2, uncharacterized p 96.7 0.0043 1.5E-07 50.2 7.1 54 80-134 128-181 (272)
46 4dmg_A Putative uncharacterize 96.6 0.0022 7.5E-08 55.0 5.3 69 61-133 190-272 (393)
47 1dl5_A Protein-L-isoaspartate 96.6 0.005 1.7E-07 50.8 7.2 55 80-134 84-138 (317)
48 3grz_A L11 mtase, ribosomal pr 96.6 0.015 5E-07 44.2 9.4 54 80-135 69-122 (205)
49 3c3p_A Methyltransferase; NP_9 96.6 0.0034 1.2E-07 48.2 5.7 54 80-133 65-119 (210)
50 1m6y_A S-adenosyl-methyltransf 96.6 0.0024 8.3E-08 52.8 5.0 53 80-134 35-87 (301)
51 1i9g_A Hypothetical protein RV 96.6 0.0062 2.1E-07 48.7 7.3 55 80-134 108-165 (280)
52 2as0_A Hypothetical protein PH 96.6 0.0026 8.8E-08 54.2 5.3 52 80-133 226-278 (396)
53 1xdz_A Methyltransferase GIDB; 96.5 0.0031 1E-07 49.7 5.1 54 80-134 79-132 (240)
54 1yzh_A TRNA (guanine-N(7)-)-me 96.5 0.008 2.7E-07 46.3 7.3 54 80-134 50-103 (214)
55 2qm3_A Predicted methyltransfe 96.5 0.0061 2.1E-07 51.5 7.1 72 62-133 146-232 (373)
56 2vdv_E TRNA (guanine-N(7)-)-me 96.5 0.0091 3.1E-07 47.1 7.7 53 80-133 58-118 (246)
57 3kr9_A SAM-dependent methyltra 96.4 0.016 5.3E-07 46.0 8.9 78 80-158 24-140 (225)
58 3dh0_A SAM dependent methyltra 96.4 0.0078 2.7E-07 46.1 7.0 56 80-135 46-101 (219)
59 3lpm_A Putative methyltransfer 96.4 0.0083 2.8E-07 47.7 7.2 53 80-134 58-111 (259)
60 3dxy_A TRNA (guanine-N(7)-)-me 96.4 0.008 2.7E-07 47.0 6.9 53 80-133 43-95 (218)
61 2avd_A Catechol-O-methyltransf 96.4 0.006 2.1E-07 47.2 6.1 53 80-132 78-131 (229)
62 3gdh_A Trimethylguanosine synt 96.4 0.0064 2.2E-07 47.5 6.3 52 80-134 87-139 (241)
63 2yxe_A Protein-L-isoaspartate 96.4 0.009 3.1E-07 45.7 7.0 54 80-133 86-139 (215)
64 1jsx_A Glucose-inhibited divis 96.4 0.012 4E-07 44.8 7.5 55 80-135 74-128 (207)
65 2hnk_A SAM-dependent O-methylt 96.4 0.0082 2.8E-07 47.1 6.8 54 80-133 69-123 (239)
66 1r18_A Protein-L-isoaspartate( 96.4 0.003 1E-07 49.2 4.2 54 80-133 93-156 (227)
67 3evz_A Methyltransferase; NYSG 96.3 0.01 3.4E-07 45.9 7.2 52 80-134 64-116 (230)
68 2frn_A Hypothetical protein PH 96.3 0.011 3.9E-07 47.7 7.7 54 80-135 134-188 (278)
69 1nv8_A HEMK protein; class I a 96.3 0.01 3.5E-07 48.3 7.2 52 80-133 132-184 (284)
70 3gnl_A Uncharacterized protein 96.3 0.016 5.5E-07 46.6 8.2 77 80-157 30-145 (244)
71 3v97_A Ribosomal RNA large sub 96.3 0.0047 1.6E-07 56.8 5.6 70 62-133 517-601 (703)
72 3p9n_A Possible methyltransfer 96.2 0.012 4.2E-07 44.2 6.9 53 80-134 53-105 (189)
73 1wy7_A Hypothetical protein PH 96.2 0.008 2.7E-07 45.7 5.9 53 80-135 58-110 (207)
74 3cbg_A O-methyltransferase; cy 96.2 0.009 3.1E-07 46.8 6.2 53 80-132 81-134 (232)
75 2b25_A Hypothetical protein; s 96.2 0.011 3.8E-07 48.9 7.0 55 80-134 114-179 (336)
76 3ll7_A Putative methyltransfer 96.1 0.011 3.8E-07 51.0 6.6 52 80-134 102-155 (410)
77 3hm2_A Precorrin-6Y C5,15-meth 96.1 0.011 3.9E-07 43.5 5.9 51 80-132 34-85 (178)
78 2h1r_A Dimethyladenosine trans 96.1 0.0072 2.5E-07 49.6 5.2 53 80-135 51-103 (299)
79 4gek_A TRNA (CMO5U34)-methyltr 95.9 0.023 7.9E-07 45.7 7.4 57 80-136 79-137 (261)
80 3vc1_A Geranyl diphosphate 2-C 95.9 0.023 7.8E-07 46.3 7.5 54 80-135 126-180 (312)
81 1jg1_A PIMT;, protein-L-isoasp 95.8 0.019 6.3E-07 44.9 6.5 50 80-131 100-149 (235)
82 2ift_A Putative methylase HI07 95.8 0.02 7E-07 43.7 6.6 52 80-133 62-115 (201)
83 3f4k_A Putative methyltransfer 95.8 0.031 1.1E-06 43.7 7.7 54 80-135 55-109 (257)
84 1g8a_A Fibrillarin-like PRE-rR 95.8 0.014 4.7E-07 45.2 5.5 52 80-133 82-133 (227)
85 3cvo_A Methyltransferase-like 95.7 0.025 8.6E-07 44.1 6.8 52 80-133 37-91 (202)
86 2fpo_A Methylase YHHF; structu 95.7 0.024 8.2E-07 43.4 6.7 52 80-133 63-114 (202)
87 1fbn_A MJ fibrillarin homologu 95.7 0.017 5.9E-07 44.9 5.8 51 80-133 83-133 (230)
88 2yvl_A TRMI protein, hypotheti 95.7 0.032 1.1E-06 43.4 7.4 53 80-135 100-153 (248)
89 1nkv_A Hypothetical protein YJ 95.7 0.038 1.3E-06 43.2 7.9 54 80-135 45-99 (256)
90 2yxd_A Probable cobalt-precorr 95.7 0.028 9.6E-07 41.2 6.6 51 80-133 44-94 (183)
91 1xxl_A YCGJ protein; structura 95.7 0.018 6E-07 45.1 5.7 53 80-135 30-82 (239)
92 3kkz_A Uncharacterized protein 95.6 0.032 1.1E-06 44.1 7.1 54 80-135 55-109 (267)
93 2xvm_A Tellurite resistance pr 95.4 0.046 1.6E-06 40.7 7.0 53 80-135 41-93 (199)
94 3mgg_A Methyltransferase; NYSG 95.3 0.051 1.8E-06 43.0 7.5 55 80-135 46-100 (276)
95 2esr_A Methyltransferase; stru 95.3 0.037 1.3E-06 40.9 6.1 52 80-133 40-92 (177)
96 3dlc_A Putative S-adenosyl-L-m 95.3 0.045 1.5E-06 41.3 6.7 54 80-135 52-106 (219)
97 1l3i_A Precorrin-6Y methyltran 95.2 0.043 1.5E-06 40.4 6.3 51 80-133 42-93 (192)
98 2h00_A Methyltransferase 10 do 95.2 0.042 1.4E-06 43.2 6.5 53 80-133 74-127 (254)
99 1vl5_A Unknown conserved prote 95.1 0.056 1.9E-06 42.5 7.0 53 80-135 46-98 (260)
100 2ipx_A RRNA 2'-O-methyltransfe 95.1 0.061 2.1E-06 41.7 7.1 52 80-133 86-137 (233)
101 1dus_A MJ0882; hypothetical pr 95.1 0.06 2.1E-06 39.7 6.8 52 80-134 61-114 (194)
102 3tm4_A TRNA (guanine N2-)-meth 95.0 0.033 1.1E-06 47.0 5.8 55 80-135 226-281 (373)
103 3g5t_A Trans-aconitate 3-methy 95.0 0.074 2.5E-06 42.8 7.5 56 80-135 45-102 (299)
104 2fhp_A Methylase, putative; al 95.0 0.066 2.3E-06 39.5 6.7 52 80-133 53-105 (187)
105 3hem_A Cyclopropane-fatty-acyl 95.0 0.062 2.1E-06 43.4 7.0 54 80-135 81-135 (302)
106 1zq9_A Probable dimethyladenos 94.9 0.046 1.6E-06 44.4 6.0 53 80-135 37-90 (285)
107 2igt_A SAM dependent methyltra 94.7 0.059 2E-06 44.9 6.4 51 80-133 162-214 (332)
108 3bt7_A TRNA (uracil-5-)-methyl 94.7 0.06 2E-06 45.3 6.4 51 80-133 222-272 (369)
109 2yx1_A Hypothetical protein MJ 94.6 0.052 1.8E-06 45.1 5.8 52 80-135 204-256 (336)
110 1ws6_A Methyltransferase; stru 94.6 0.062 2.1E-06 39.0 5.6 50 80-133 50-99 (171)
111 2b78_A Hypothetical protein SM 94.6 0.058 2E-06 45.8 6.0 52 80-133 221-274 (385)
112 3ckk_A TRNA (guanine-N(7)-)-me 94.5 0.082 2.8E-06 41.6 6.6 53 80-133 55-113 (235)
113 1vbf_A 231AA long hypothetical 94.4 0.062 2.1E-06 41.4 5.4 49 80-133 79-127 (231)
114 3dou_A Ribosomal RNA large sub 94.3 0.029 9.9E-07 42.8 3.4 41 80-134 34-74 (191)
115 3gu3_A Methyltransferase; alph 94.3 0.077 2.6E-06 42.5 6.1 56 80-136 31-86 (284)
116 3gru_A Dimethyladenosine trans 94.1 0.11 3.6E-06 42.8 6.6 51 80-135 59-109 (295)
117 3mq2_A 16S rRNA methyltransfer 94.0 0.1 3.5E-06 39.8 5.9 56 80-136 36-95 (218)
118 3bus_A REBM, methyltransferase 94.0 0.19 6.6E-06 39.5 7.7 54 80-135 70-124 (273)
119 3ocj_A Putative exported prote 94.0 0.037 1.2E-06 45.0 3.4 56 80-135 127-183 (305)
120 2bm8_A Cephalosporin hydroxyla 93.9 0.027 9.1E-07 44.5 2.5 50 80-134 90-142 (236)
121 1uwv_A 23S rRNA (uracil-5-)-me 93.9 0.11 3.8E-06 44.6 6.6 51 80-133 295-345 (433)
122 1wzn_A SAM-dependent methyltra 93.8 0.15 5E-06 39.7 6.6 52 80-135 50-101 (252)
123 3p2e_A 16S rRNA methylase; met 93.8 0.042 1.5E-06 43.0 3.5 55 80-135 33-91 (225)
124 2o57_A Putative sarcosine dime 93.8 0.19 6.6E-06 40.1 7.4 54 80-135 91-145 (297)
125 3m70_A Tellurite resistance pr 93.8 0.18 6.2E-06 40.1 7.2 52 80-135 129-180 (286)
126 1ve3_A Hypothetical protein PH 93.7 0.2 6.7E-06 38.1 7.1 52 80-135 47-98 (227)
127 4dzr_A Protein-(glutamine-N5) 93.7 0.021 7.3E-07 43.0 1.4 51 80-132 39-89 (215)
128 2ozv_A Hypothetical protein AT 93.7 0.11 3.8E-06 41.3 5.8 54 80-134 45-102 (260)
129 2kw5_A SLR1183 protein; struct 93.6 0.17 5.7E-06 38.0 6.5 52 80-135 38-89 (202)
130 3dtn_A Putative methyltransfer 93.5 0.13 4.3E-06 39.6 5.6 54 80-136 53-106 (234)
131 4htf_A S-adenosylmethionine-de 93.4 0.13 4.6E-06 40.9 5.9 53 80-135 77-130 (285)
132 3tqs_A Ribosomal RNA small sub 93.3 0.1 3.4E-06 41.9 4.9 51 80-135 38-88 (255)
133 2plw_A Ribosomal RNA methyltra 93.2 0.11 3.6E-06 39.1 4.7 45 80-135 31-76 (201)
134 1kpg_A CFA synthase;, cyclopro 93.2 0.2 6.9E-06 39.8 6.6 54 80-135 73-127 (287)
135 3uzu_A Ribosomal RNA small sub 93.0 0.15 5E-06 41.5 5.6 53 80-136 51-104 (279)
136 2fk8_A Methoxy mycolic acid sy 92.9 0.22 7.5E-06 40.3 6.6 54 80-135 99-153 (318)
137 1qam_A ERMC' methyltransferase 92.9 0.15 5E-06 40.3 5.3 52 80-136 39-90 (244)
138 3ldg_A Putative uncharacterize 92.8 0.29 9.8E-06 41.6 7.2 40 97-136 257-297 (384)
139 3ldu_A Putative methylase; str 92.7 0.31 1E-05 41.4 7.3 40 97-136 258-298 (385)
140 4fsd_A Arsenic methyltransfera 92.6 0.27 9.3E-06 41.3 6.9 55 80-134 92-154 (383)
141 3jwh_A HEN1; methyltransferase 92.5 0.29 1E-05 37.1 6.4 55 80-135 38-97 (217)
142 3bkx_A SAM-dependent methyltra 92.5 0.2 6.7E-06 39.5 5.5 51 80-130 52-109 (275)
143 1ri5_A MRNA capping enzyme; me 92.4 0.36 1.2E-05 38.2 7.1 53 80-134 73-126 (298)
144 2jjq_A Uncharacterized RNA met 92.2 0.44 1.5E-05 41.0 7.8 52 80-135 299-350 (425)
145 2f8l_A Hypothetical protein LM 92.1 0.27 9.3E-06 40.6 6.2 53 80-133 139-195 (344)
146 3d2l_A SAM-dependent methyltra 91.9 0.25 8.7E-06 37.9 5.4 51 80-135 42-92 (243)
147 3k0b_A Predicted N6-adenine-sp 91.7 0.31 1.1E-05 41.5 6.2 39 97-135 264-303 (393)
148 2fyt_A Protein arginine N-meth 91.7 0.51 1.7E-05 39.1 7.4 53 80-135 73-126 (340)
149 3sm3_A SAM-dependent methyltra 91.4 0.36 1.2E-05 36.6 5.8 53 80-135 39-96 (235)
150 2yqz_A Hypothetical protein TT 91.4 0.31 1E-05 37.9 5.5 52 80-135 48-99 (263)
151 1ne2_A Hypothetical protein TA 91.3 0.22 7.7E-06 37.3 4.4 49 80-135 60-108 (200)
152 3g2m_A PCZA361.24; SAM-depende 91.2 0.23 7.8E-06 39.9 4.7 54 80-136 91-147 (299)
153 3ujc_A Phosphoethanolamine N-m 91.2 0.21 7.1E-06 38.9 4.3 52 80-135 64-115 (266)
154 2ex4_A Adrenal gland protein A 91.1 0.17 5.9E-06 39.2 3.8 54 80-135 88-141 (241)
155 3jwg_A HEN1, methyltransferase 91.1 0.44 1.5E-05 36.1 5.9 55 80-135 38-97 (219)
156 1inl_A Spermidine synthase; be 90.9 0.23 7.9E-06 40.4 4.5 53 80-133 99-155 (296)
157 3tka_A Ribosomal RNA small sub 90.9 0.21 7.1E-06 42.1 4.2 75 80-168 66-151 (347)
158 2r6z_A UPF0341 protein in RSP 90.9 0.17 5.8E-06 40.5 3.5 51 80-133 92-150 (258)
159 3fut_A Dimethyladenosine trans 90.9 0.32 1.1E-05 39.4 5.2 65 80-150 55-133 (271)
160 2y1w_A Histone-arginine methyl 90.6 0.78 2.7E-05 38.0 7.5 53 80-135 59-112 (348)
161 3q7e_A Protein arginine N-meth 90.6 0.75 2.6E-05 38.1 7.4 53 80-135 75-128 (349)
162 3ofk_A Nodulation protein S; N 90.5 0.32 1.1E-05 36.8 4.6 52 80-136 60-111 (216)
163 1y8c_A S-adenosylmethionine-de 90.5 0.45 1.5E-05 36.3 5.6 52 80-135 46-97 (246)
164 3fzg_A 16S rRNA methylase; met 90.3 0.56 1.9E-05 36.4 5.9 88 80-170 58-166 (200)
165 3dmg_A Probable ribosomal RNA 89.7 0.71 2.4E-05 39.1 6.6 52 80-135 242-293 (381)
166 2nyu_A Putative ribosomal RNA 89.7 0.38 1.3E-05 35.7 4.4 42 80-132 31-81 (196)
167 3ou2_A SAM-dependent methyltra 89.7 0.72 2.4E-05 34.5 6.0 48 80-134 55-102 (218)
168 1u2z_A Histone-lysine N-methyl 89.7 0.89 3E-05 39.3 7.3 52 80-132 251-311 (433)
169 4auk_A Ribosomal RNA large sub 89.6 0.34 1.2E-05 41.2 4.5 47 80-136 220-266 (375)
170 4dcm_A Ribosomal RNA large sub 89.6 0.89 3.1E-05 38.3 7.1 53 80-133 231-286 (375)
171 2nxc_A L11 mtase, ribosomal pr 89.3 0.84 2.9E-05 35.9 6.4 50 80-133 129-178 (254)
172 2oyr_A UPF0341 protein YHIQ; a 89.3 0.36 1.2E-05 38.8 4.2 51 80-133 97-156 (258)
173 2p8j_A S-adenosylmethionine-de 89.1 0.71 2.4E-05 34.5 5.6 53 80-135 32-84 (209)
174 1o9g_A RRNA methyltransferase; 89.1 0.16 5.6E-06 39.7 2.1 43 80-122 60-106 (250)
175 3bgv_A MRNA CAP guanine-N7 met 89.0 1.4 4.7E-05 35.5 7.7 54 80-135 43-103 (313)
176 3b3j_A Histone-arginine methyl 89.0 0.95 3.2E-05 39.5 7.0 53 80-135 167-220 (480)
177 1g6q_1 HnRNP arginine N-methyl 88.6 1.3 4.4E-05 36.3 7.3 53 80-135 47-100 (328)
178 1wg8_A Predicted S-adenosylmet 88.5 0.34 1.2E-05 39.7 3.6 65 80-161 31-100 (285)
179 2p41_A Type II methyltransfera 88.5 0.044 1.5E-06 45.2 -1.8 50 80-135 91-145 (305)
180 2p35_A Trans-aconitate 2-methy 88.5 0.83 2.8E-05 35.3 5.8 50 80-135 42-91 (259)
181 3r0q_C Probable protein argini 88.4 0.98 3.3E-05 37.9 6.5 53 80-135 72-125 (376)
182 2pxx_A Uncharacterized protein 88.3 0.66 2.2E-05 34.6 4.9 52 80-135 51-102 (215)
183 3ftd_A Dimethyladenosine trans 88.3 0.37 1.3E-05 38.3 3.7 50 80-135 40-89 (249)
184 2wk1_A NOVP; transferase, O-me 88.0 0.49 1.7E-05 38.6 4.2 54 80-133 115-200 (282)
185 3g07_A 7SK snRNA methylphospha 87.9 0.87 3E-05 36.6 5.7 41 80-121 55-95 (292)
186 1mjf_A Spermidine synthase; sp 87.9 0.48 1.6E-05 38.1 4.1 51 80-133 84-145 (281)
187 3hnr_A Probable methyltransfer 87.5 0.68 2.3E-05 34.9 4.6 49 80-135 54-102 (220)
188 3m33_A Uncharacterized protein 87.5 0.98 3.4E-05 34.6 5.6 45 80-132 57-101 (226)
189 3lcc_A Putative methyl chlorid 86.9 0.66 2.3E-05 35.5 4.3 54 80-136 75-129 (235)
190 2r3s_A Uncharacterized protein 86.9 1.7 5.9E-05 35.0 7.0 53 80-134 174-227 (335)
191 1qyr_A KSGA, high level kasuga 86.9 0.48 1.6E-05 37.8 3.5 51 80-135 30-80 (252)
192 1xtp_A LMAJ004091AAA; SGPP, st 86.8 0.82 2.8E-05 35.2 4.8 52 80-135 102-153 (254)
193 3htx_A HEN1; HEN1, small RNA m 86.7 1.4 4.8E-05 41.5 6.9 57 80-136 730-792 (950)
194 1p91_A Ribosomal RNA large sub 86.4 1.1 3.7E-05 35.1 5.3 50 80-135 94-143 (269)
195 1pjz_A Thiopurine S-methyltran 86.1 0.79 2.7E-05 34.7 4.3 53 80-135 31-95 (203)
196 3ccf_A Cyclopropane-fatty-acyl 85.6 1.1 3.8E-05 35.3 5.0 48 80-135 66-113 (279)
197 1yub_A Ermam, rRNA methyltrans 85.4 0.078 2.7E-06 41.7 -1.9 52 80-136 38-89 (245)
198 2xyq_A Putative 2'-O-methyl tr 85.2 0.4 1.4E-05 39.2 2.3 40 81-135 79-119 (290)
199 3adn_A Spermidine synthase; am 85.2 1.1 3.7E-05 36.5 4.8 54 80-134 92-150 (294)
200 1x19_A CRTF-related protein; m 85.1 2.8 9.5E-05 34.4 7.5 54 80-135 199-253 (359)
201 1zx0_A Guanidinoacetate N-meth 84.7 0.77 2.6E-05 35.4 3.7 52 80-134 69-120 (236)
202 3g5l_A Putative S-adenosylmeth 84.3 1.5 5.3E-05 33.8 5.3 51 80-135 53-103 (253)
203 3cgg_A SAM-dependent methyltra 83.8 1.9 6.6E-05 31.3 5.4 47 80-134 55-101 (195)
204 3h2b_A SAM-dependent methyltra 83.8 1.5 5.1E-05 32.6 4.8 48 80-135 50-97 (203)
205 3v97_A Ribosomal RNA large sub 83.7 2.1 7.2E-05 39.2 6.6 40 97-136 257-297 (703)
206 1qzz_A RDMB, aclacinomycin-10- 83.6 3.4 0.00012 33.9 7.4 52 80-133 191-243 (374)
207 1xj5_A Spermidine synthase 1; 83.2 1.1 3.7E-05 37.2 4.1 53 80-133 129-185 (334)
208 3ggd_A SAM-dependent methyltra 82.9 2.4 8.2E-05 32.4 5.9 48 80-133 65-112 (245)
209 3bkw_A MLL3908 protein, S-aden 82.6 1.4 4.7E-05 33.6 4.3 51 80-135 52-102 (243)
210 3l8d_A Methyltransferase; stru 81.9 2 6.7E-05 32.7 5.0 50 80-135 62-111 (242)
211 1ej0_A FTSJ; methyltransferase 81.7 0.89 3E-05 32.4 2.7 44 80-134 31-74 (180)
212 3bzb_A Uncharacterized protein 81.6 2.9 9.8E-05 33.3 6.0 49 80-130 88-147 (281)
213 3e23_A Uncharacterized protein 81.3 1.8 6.3E-05 32.3 4.5 47 80-135 52-98 (211)
214 2pjd_A Ribosomal RNA small sub 81.2 3.2 0.00011 34.0 6.3 53 80-134 205-257 (343)
215 3giw_A Protein of unknown func 80.9 1.7 5.8E-05 35.3 4.4 55 80-134 87-143 (277)
216 2i7c_A Spermidine synthase; tr 80.7 1.3 4.4E-05 35.6 3.6 53 80-133 87-143 (283)
217 3bxo_A N,N-dimethyltransferase 79.7 3.2 0.00011 31.4 5.5 48 80-135 49-96 (239)
218 4fn4_A Short chain dehydrogena 79.3 5 0.00017 31.9 6.6 67 80-151 15-82 (254)
219 2b2c_A Spermidine synthase; be 79.1 1.2 4.2E-05 36.5 3.1 53 80-133 117-173 (314)
220 2pt6_A Spermidine synthase; tr 79.1 1.4 4.7E-05 36.3 3.3 53 80-133 125-181 (321)
221 2o07_A Spermidine synthase; st 78.8 2.2 7.4E-05 34.8 4.4 53 80-133 104-160 (304)
222 1tw3_A COMT, carminomycin 4-O- 78.6 6 0.00021 32.2 7.2 52 80-133 192-244 (360)
223 3uwp_A Histone-lysine N-methyl 78.6 6.9 0.00024 33.8 7.6 54 80-134 182-244 (438)
224 3pfg_A N-methyltransferase; N, 77.4 2.2 7.5E-05 33.1 4.0 48 80-135 59-106 (263)
225 1uir_A Polyamine aminopropyltr 76.9 2.7 9.2E-05 34.3 4.5 53 80-133 86-143 (314)
226 2py6_A Methyltransferase FKBM; 76.8 6.8 0.00023 33.2 7.1 50 80-129 235-289 (409)
227 3gjy_A Spermidine synthase; AP 76.8 1.5 5E-05 36.4 2.8 54 80-134 98-151 (317)
228 1i4w_A Mitochondrial replicati 75.9 4.3 0.00015 34.0 5.5 51 80-134 67-117 (353)
229 1iy9_A Spermidine synthase; ro 75.5 4.3 0.00015 32.4 5.3 53 80-133 84-140 (275)
230 3i9f_A Putative type 11 methyl 75.2 3.3 0.00011 29.6 4.2 43 80-130 26-68 (170)
231 3frh_A 16S rRNA methylase; met 74.8 9 0.00031 30.6 6.9 86 80-170 114-220 (253)
232 2ip2_A Probable phenazine-spec 74.3 3.2 0.00011 33.6 4.3 52 80-133 176-228 (334)
233 3bwc_A Spermidine synthase; SA 74.2 4.1 0.00014 32.9 4.9 53 80-133 104-160 (304)
234 2gs9_A Hypothetical protein TT 73.7 4.1 0.00014 30.3 4.5 46 80-135 45-90 (211)
235 3i53_A O-methyltransferase; CO 72.8 11 0.00037 30.4 7.2 51 80-132 178-229 (332)
236 3rih_A Short chain dehydrogena 72.5 3.1 0.00011 33.4 3.8 52 97-151 66-117 (293)
237 3lcv_B Sisomicin-gentamicin re 72.3 5.8 0.0002 32.2 5.2 88 80-169 141-249 (281)
238 3thr_A Glycine N-methyltransfe 72.0 5.6 0.00019 31.2 5.1 51 80-133 66-120 (293)
239 3ege_A Putative methyltransfer 71.7 1.8 6.3E-05 33.7 2.2 47 80-135 43-89 (261)
240 2okc_A Type I restriction enzy 71.6 3.2 0.00011 35.5 3.8 55 80-134 180-248 (445)
241 2gb4_A Thiopurine S-methyltran 71.4 5.4 0.00018 31.4 4.9 53 80-135 77-146 (252)
242 4hc4_A Protein arginine N-meth 71.0 14 0.00047 31.1 7.5 54 80-136 92-146 (376)
243 2qe6_A Uncharacterized protein 70.8 11 0.00036 29.9 6.6 51 80-133 86-139 (274)
244 3orh_A Guanidinoacetate N-meth 70.8 2.9 0.0001 32.3 3.1 50 80-132 69-118 (236)
245 3mcz_A O-methyltransferase; ad 67.6 17 0.00057 29.4 7.3 54 80-135 188-242 (352)
246 2oxt_A Nucleoside-2'-O-methylt 66.2 1.6 5.6E-05 34.8 0.8 50 80-135 83-137 (265)
247 2p7i_A Hypothetical protein; p 66.2 4 0.00014 30.8 3.0 48 80-134 51-98 (250)
248 2jvf_A De novo protein M7; tet 66.2 15 0.0005 23.7 5.1 34 108-149 34-67 (96)
249 3dp7_A SAM-dependent methyltra 66.0 13 0.00043 30.6 6.2 53 80-134 188-241 (363)
250 3sso_A Methyltransferase; macr 65.6 6.3 0.00022 33.9 4.3 44 82-134 233-276 (419)
251 3gwz_A MMCR; methyltransferase 65.2 19 0.00066 29.5 7.3 51 80-132 211-262 (369)
252 2wa2_A Non-structural protein 63.0 2 7E-05 34.5 0.8 50 80-135 91-145 (276)
253 2ar0_A M.ecoki, type I restric 61.7 8.9 0.00031 33.8 4.7 54 80-133 178-253 (541)
254 4hg2_A Methyltransferase type 61.0 4.1 0.00014 32.2 2.2 47 80-135 48-94 (257)
255 3o4f_A Spermidine synthase; am 60.7 22 0.00074 29.0 6.5 74 80-163 92-170 (294)
256 2aot_A HMT, histamine N-methyl 60.4 16 0.00054 28.8 5.7 48 80-127 61-114 (292)
257 2vdw_A Vaccinia virus capping 59.8 27 0.00094 27.9 7.1 41 80-122 57-97 (302)
258 2cmg_A Spermidine synthase; tr 59.6 3.8 0.00013 32.5 1.8 52 80-134 81-136 (262)
259 3r24_A NSP16, 2'-O-methyl tran 59.1 5.5 0.00019 33.1 2.6 24 80-106 124-148 (344)
260 3pk0_A Short-chain dehydrogena 58.8 13 0.00043 28.9 4.7 52 97-151 35-86 (262)
261 2avn_A Ubiquinone/menaquinone 58.7 14 0.00047 28.5 4.9 47 80-135 63-109 (260)
262 3q87_B N6 adenine specific DNA 58.0 7.3 0.00025 28.2 3.0 41 80-133 32-72 (170)
263 3iv6_A Putative Zn-dependent a 57.9 12 0.0004 29.8 4.4 37 80-119 54-90 (261)
264 2ih2_A Modification methylase 57.3 5.3 0.00018 33.3 2.4 47 80-135 48-94 (421)
265 1xu9_A Corticosteroid 11-beta- 56.9 25 0.00084 27.5 6.2 53 81-133 36-89 (286)
266 4g81_D Putative hexonate dehyd 56.8 17 0.0006 28.6 5.3 52 96-151 33-84 (255)
267 3e8s_A Putative SAM dependent 56.2 11 0.00039 27.8 3.9 33 80-115 61-93 (227)
268 3ioy_A Short-chain dehydrogena 54.9 29 0.00098 27.9 6.4 68 81-151 16-85 (319)
269 3o38_A Short chain dehydrogena 54.2 17 0.00058 28.0 4.8 51 97-150 48-98 (266)
270 3lyl_A 3-oxoacyl-(acyl-carrier 54.0 28 0.00095 26.3 6.0 65 83-151 15-80 (247)
271 2qfm_A Spermine synthase; sper 53.3 5.6 0.00019 33.6 1.8 70 80-160 197-277 (364)
272 3exc_X Uncharacterized protein 52.8 20 0.0007 23.8 4.3 26 98-123 6-32 (91)
273 4fs3_A Enoyl-[acyl-carrier-pro 51.6 13 0.00043 29.0 3.6 53 96-151 32-84 (256)
274 3cc8_A Putative methyltransfer 51.6 14 0.00048 27.3 3.8 44 80-133 41-84 (230)
275 3ucx_A Short chain dehydrogena 51.4 30 0.001 26.7 5.8 51 97-151 36-86 (264)
276 2i62_A Nicotinamide N-methyltr 50.9 6 0.00021 30.3 1.6 38 80-119 65-102 (265)
277 3svt_A Short-chain type dehydr 49.4 25 0.00087 27.4 5.1 67 82-151 20-89 (281)
278 3qiv_A Short-chain dehydrogena 49.0 27 0.00094 26.5 5.2 66 81-150 17-83 (253)
279 4gqb_A Protein arginine N-meth 48.8 51 0.0017 29.8 7.5 57 80-137 366-426 (637)
280 3o26_A Salutaridine reductase; 47.4 33 0.0011 26.6 5.6 37 97-133 37-73 (311)
281 1geg_A Acetoin reductase; SDR 47.2 42 0.0014 25.6 6.1 65 83-151 12-77 (256)
282 4g65_A TRK system potassium up 47.0 37 0.0013 29.1 6.1 50 80-134 241-290 (461)
283 3tfo_A Putative 3-oxoacyl-(acy 46.8 30 0.001 27.0 5.1 51 97-151 29-79 (264)
284 4azs_A Methyltransferase WBDD; 46.6 35 0.0012 30.0 6.0 52 80-134 75-126 (569)
285 4ibo_A Gluconate dehydrogenase 46.2 32 0.0011 26.8 5.2 67 81-151 34-101 (271)
286 4g65_A TRK system potassium up 45.9 35 0.0012 29.3 5.8 49 80-134 9-58 (461)
287 3nyw_A Putative oxidoreductase 45.7 28 0.00096 26.7 4.8 52 97-151 32-85 (250)
288 3f1l_A Uncharacterized oxidore 45.7 28 0.00096 26.6 4.8 54 97-151 37-90 (252)
289 3ftp_A 3-oxoacyl-[acyl-carrier 45.5 30 0.001 26.9 5.0 51 97-151 53-103 (270)
290 1xkq_A Short-chain reductase f 45.4 30 0.001 26.9 5.0 66 82-150 15-83 (280)
291 4egf_A L-xylulose reductase; s 45.0 45 0.0015 25.7 5.9 51 97-151 45-96 (266)
292 3gaf_A 7-alpha-hydroxysteroid 44.5 29 0.001 26.6 4.8 51 97-151 37-87 (256)
293 2zig_A TTHA0409, putative modi 43.7 58 0.002 25.8 6.5 50 80-132 244-293 (297)
294 3hp7_A Hemolysin, putative; st 42.8 16 0.00056 29.5 3.1 30 80-111 94-123 (291)
295 3sju_A Keto reductase; short-c 42.4 34 0.0012 26.7 4.9 50 97-150 49-98 (279)
296 3dli_A Methyltransferase; PSI- 42.3 28 0.00094 26.2 4.2 33 80-115 50-82 (240)
297 2ivy_A Hypothetical protein SS 42.1 29 0.00099 23.4 3.8 26 98-123 5-31 (101)
298 2rhc_B Actinorhodin polyketide 42.0 52 0.0018 25.5 5.9 67 81-151 30-97 (277)
299 3lkd_A Type I restriction-modi 41.6 47 0.0016 29.2 6.0 55 80-134 230-288 (542)
300 3apt_A Methylenetetrahydrofola 41.3 28 0.00097 28.3 4.3 69 98-166 77-155 (310)
301 2b4q_A Rhamnolipids biosynthes 41.2 28 0.00096 27.2 4.2 66 81-151 37-103 (276)
302 4dry_A 3-oxoacyl-[acyl-carrier 41.0 44 0.0015 26.1 5.3 53 81-133 41-94 (281)
303 2r8r_A Sensor protein; KDPD, P 40.9 9 0.00031 30.1 1.1 74 80-158 13-92 (228)
304 3i1j_A Oxidoreductase, short c 40.5 46 0.0016 25.0 5.2 49 83-131 24-73 (247)
305 1xhl_A Short-chain dehydrogena 40.4 48 0.0016 26.1 5.5 67 81-150 34-103 (297)
306 3fwz_A Inner membrane protein 40.3 35 0.0012 23.6 4.2 47 80-133 13-60 (140)
307 3h7a_A Short chain dehydrogena 39.8 46 0.0016 25.5 5.2 36 97-133 32-67 (252)
308 3to5_A CHEY homolog; alpha(5)b 39.8 93 0.0032 21.6 7.7 64 88-161 3-68 (134)
309 1xg5_A ARPG836; short chain de 39.7 66 0.0023 24.7 6.2 54 80-133 39-94 (279)
310 2z43_A DNA repair and recombin 39.5 20 0.00069 28.9 3.2 43 80-122 114-168 (324)
311 3t8y_A CHEB, chemotaxis respon 39.5 93 0.0032 21.5 7.3 41 81-121 10-50 (164)
312 2c07_A 3-oxoacyl-(acyl-carrier 39.3 93 0.0032 24.0 7.0 53 80-133 51-104 (285)
313 3imf_A Short chain dehydrogena 39.2 28 0.00095 26.8 3.8 50 97-150 31-80 (257)
314 1fmc_A 7 alpha-hydroxysteroid 39.1 89 0.003 23.3 6.7 53 80-133 18-71 (255)
315 3lf2_A Short chain oxidoreduct 39.1 65 0.0022 24.7 6.0 37 97-133 33-70 (265)
316 3cxt_A Dehydrogenase with diff 38.8 55 0.0019 25.8 5.6 68 80-151 41-109 (291)
317 4eue_A Putative reductase CA_C 38.6 81 0.0028 26.7 6.9 68 80-151 68-149 (418)
318 4da9_A Short-chain dehydrogena 38.3 86 0.0029 24.3 6.7 51 97-151 54-105 (280)
319 3rkr_A Short chain oxidoreduct 38.3 62 0.0021 24.7 5.8 52 81-133 37-89 (262)
320 3awd_A GOX2181, putative polyo 38.1 71 0.0024 24.0 6.0 53 80-133 20-73 (260)
321 1lnq_A MTHK channels, potassiu 38.0 37 0.0013 27.3 4.5 46 80-133 121-166 (336)
322 2oo3_A Protein involved in cat 37.7 18 0.00061 29.4 2.5 40 91-132 108-147 (283)
323 3lho_A Putative hydrolase; str 37.2 17 0.00059 29.3 2.2 28 13-40 166-195 (267)
324 4fc7_A Peroxisomal 2,4-dienoyl 37.1 58 0.002 25.2 5.5 67 81-151 35-103 (277)
325 3sx2_A Putative 3-ketoacyl-(ac 37.0 60 0.0021 25.0 5.5 64 83-150 23-99 (278)
326 2jah_A Clavulanic acid dehydro 36.5 79 0.0027 23.9 6.1 51 82-133 16-67 (247)
327 3r1i_A Short-chain type dehydr 36.5 37 0.0013 26.5 4.2 50 83-133 42-92 (276)
328 3hix_A ALR3790 protein; rhodan 36.2 89 0.003 20.4 5.6 37 91-127 47-83 (106)
329 2aef_A Calcium-gated potassium 35.7 62 0.0021 24.3 5.3 46 80-133 15-60 (234)
330 1vlm_A SAM-dependent methyltra 35.6 24 0.00083 26.2 2.9 42 80-135 56-97 (219)
331 1e7w_A Pteridine reductase; di 35.6 1E+02 0.0035 24.0 6.7 37 97-134 34-72 (291)
332 3e05_A Precorrin-6Y C5,15-meth 35.4 90 0.0031 22.6 6.1 37 89-126 128-164 (204)
333 3v2h_A D-beta-hydroxybutyrate 35.3 66 0.0022 25.1 5.5 68 81-151 33-102 (281)
334 2px2_A Genome polyprotein [con 35.2 3.9 0.00013 33.1 -1.9 25 80-104 82-109 (269)
335 3pgx_A Carveol dehydrogenase; 35.2 55 0.0019 25.4 5.0 51 97-151 40-103 (280)
336 2xzl_A ATP-dependent helicase 35.0 34 0.0012 31.6 4.2 46 80-125 382-433 (802)
337 3tjr_A Short chain dehydrogena 34.9 81 0.0028 24.8 6.0 52 81-133 39-91 (301)
338 1v5w_A DMC1, meiotic recombina 34.7 29 0.00098 28.3 3.4 42 80-121 129-182 (343)
339 1yb1_A 17-beta-hydroxysteroid 34.6 85 0.0029 24.1 6.0 52 81-133 39-91 (272)
340 3v8b_A Putative dehydrogenase, 34.6 45 0.0015 26.1 4.4 50 97-150 53-102 (283)
341 2l69_A Rossmann 2X3 fold prote 34.3 91 0.0031 21.1 5.2 38 85-122 66-103 (134)
342 3opn_A Putative hemolysin; str 34.3 17 0.00058 28.1 1.8 35 80-116 46-80 (232)
343 1g60_A Adenine-specific methyl 33.6 40 0.0014 26.2 3.9 39 80-121 221-259 (260)
344 2g72_A Phenylethanolamine N-me 33.4 16 0.00056 28.6 1.6 36 80-117 80-115 (289)
345 3oig_A Enoyl-[acyl-carrier-pro 33.1 59 0.002 24.8 4.8 52 97-151 34-85 (266)
346 2qq5_A DHRS1, dehydrogenase/re 32.8 96 0.0033 23.5 6.0 49 97-149 30-78 (260)
347 2qhx_A Pteridine reductase 1; 32.4 1.2E+02 0.0041 24.2 6.7 52 82-134 55-109 (328)
348 3l77_A Short-chain alcohol deh 32.0 82 0.0028 23.4 5.4 50 83-133 12-63 (235)
349 1ae1_A Tropinone reductase-I; 31.0 1.1E+02 0.0037 23.5 6.1 36 97-133 46-81 (273)
350 2dr3_A UPF0273 protein PH0284; 30.4 40 0.0014 25.1 3.3 40 80-122 30-76 (247)
351 2i1q_A DNA repair and recombin 30.4 34 0.0012 27.3 3.0 14 80-93 105-119 (322)
352 2gk6_A Regulator of nonsense t 30.2 48 0.0016 29.4 4.3 45 80-124 202-252 (624)
353 2i0x_A Hypothetical protein PF 30.1 24 0.00082 23.0 1.7 24 98-121 3-26 (85)
354 1g55_A DNA cytosine methyltran 30.0 59 0.002 26.6 4.5 50 80-135 10-60 (343)
355 2ae2_A Protein (tropinone redu 29.9 1E+02 0.0036 23.3 5.8 52 81-133 17-69 (260)
356 3t7c_A Carveol dehydrogenase; 29.8 90 0.0031 24.4 5.5 51 97-151 53-115 (299)
357 3p8z_A Mtase, non-structural p 29.8 22 0.00077 28.4 1.8 52 80-133 87-139 (267)
358 3fst_A 5,10-methylenetetrahydr 29.7 1.7E+02 0.006 23.5 7.2 69 98-166 88-158 (304)
359 1ja9_A 4HNR, 1,3,6,8-tetrahydr 29.5 1.2E+02 0.0041 22.9 6.1 53 80-133 28-82 (274)
360 2zat_A Dehydrogenase/reductase 29.5 1.2E+02 0.0041 22.9 6.1 52 81-133 22-74 (260)
361 3pxx_A Carveol dehydrogenase; 29.3 93 0.0032 23.8 5.5 50 97-150 35-96 (287)
362 3llv_A Exopolyphosphatase-rela 29.3 67 0.0023 21.8 4.2 47 80-133 12-59 (141)
363 2pnf_A 3-oxoacyl-[acyl-carrier 29.3 1.2E+02 0.0042 22.4 6.1 52 80-132 14-67 (248)
364 2zts_A Putative uncharacterize 29.0 42 0.0014 25.0 3.2 39 80-121 37-83 (251)
365 3t4x_A Oxidoreductase, short c 28.8 1.9E+02 0.0066 21.9 7.9 48 97-151 35-83 (267)
366 3oid_A Enoyl-[acyl-carrier-pro 28.7 82 0.0028 24.1 5.0 66 82-151 13-80 (258)
367 3k31_A Enoyl-(acyl-carrier-pro 28.3 61 0.0021 25.5 4.2 49 97-150 57-105 (296)
368 4dmm_A 3-oxoacyl-[acyl-carrier 28.2 1E+02 0.0035 23.7 5.5 64 83-150 38-103 (269)
369 3uve_A Carveol dehydrogenase ( 28.1 84 0.0029 24.3 5.0 51 97-151 36-102 (286)
370 1zem_A Xylitol dehydrogenase; 28.1 1E+02 0.0035 23.4 5.5 51 82-133 16-67 (262)
371 1wma_A Carbonyl reductase [NAD 28.0 1E+02 0.0036 23.0 5.5 52 81-133 12-65 (276)
372 3g7u_A Cytosine-specific methy 27.9 96 0.0033 25.7 5.5 49 80-135 10-58 (376)
373 1xq1_A Putative tropinone redu 27.9 1.3E+02 0.0045 22.6 6.1 53 80-133 21-74 (266)
374 2uvd_A 3-oxoacyl-(acyl-carrier 27.6 1.4E+02 0.0047 22.4 6.1 51 82-133 13-65 (246)
375 3oq2_A Crispr-associated prote 27.5 47 0.0016 22.4 2.9 23 98-120 10-38 (103)
376 3lfu_A DNA helicase II; SF1 he 27.4 51 0.0018 28.9 3.9 40 80-119 29-77 (647)
377 3tsc_A Putative oxidoreductase 27.3 1.1E+02 0.0037 23.5 5.5 50 97-150 36-98 (277)
378 1l3i_A Precorrin-6Y methyltran 27.1 60 0.0021 22.8 3.7 31 91-121 122-152 (192)
379 2ph3_A 3-oxoacyl-[acyl carrier 27.0 1.9E+02 0.0064 21.3 6.8 51 82-133 10-63 (245)
380 3afn_B Carbonyl reductase; alp 27.0 1.1E+02 0.0037 22.8 5.3 52 81-133 15-68 (258)
381 1edo_A Beta-keto acyl carrier 26.7 1.4E+02 0.0049 22.0 6.0 66 82-151 10-77 (244)
382 1gee_A Glucose 1-dehydrogenase 26.6 1.5E+02 0.005 22.3 6.1 52 81-133 15-68 (261)
383 1zpw_X Hypothetical protein TT 26.6 44 0.0015 21.9 2.6 24 98-121 6-30 (90)
384 2nxc_A L11 mtase, ribosomal pr 26.5 50 0.0017 25.4 3.3 18 141-158 224-241 (254)
385 4eez_A Alcohol dehydrogenase 1 26.4 66 0.0023 25.7 4.2 39 80-123 172-211 (348)
386 1iy8_A Levodione reductase; ox 26.2 1.5E+02 0.005 22.5 6.1 52 81-133 21-75 (267)
387 4b3f_X DNA-binding protein smu 26.0 72 0.0025 28.3 4.7 45 80-124 212-261 (646)
388 3oec_A Carveol dehydrogenase ( 25.9 1.2E+02 0.004 24.1 5.6 50 97-150 71-132 (317)
389 3ai3_A NADPH-sorbose reductase 25.6 1.6E+02 0.0054 22.2 6.1 51 82-133 16-68 (263)
390 3osu_A 3-oxoacyl-[acyl-carrier 25.1 1.3E+02 0.0044 22.6 5.5 60 87-150 18-79 (246)
391 3v7e_A Ribosome-associated pro 25.0 90 0.0031 19.9 3.9 27 98-124 31-57 (82)
392 2wjy_A Regulator of nonsense t 25.0 67 0.0023 29.7 4.3 43 80-122 378-426 (800)
393 1w6u_A 2,4-dienoyl-COA reducta 24.8 1.2E+02 0.0041 23.4 5.3 52 81-133 34-87 (302)
394 1vl8_A Gluconate 5-dehydrogena 24.7 1.6E+02 0.0055 22.4 6.1 51 82-133 30-82 (267)
395 1uaa_A REP helicase, protein ( 24.3 58 0.002 28.9 3.7 40 80-119 22-70 (673)
396 4e6p_A Probable sorbitol dehyd 23.8 1.4E+02 0.0048 22.6 5.5 64 81-151 16-80 (259)
397 3vkw_A Replicase large subunit 23.8 57 0.0019 28.1 3.4 40 80-120 168-208 (446)
398 1oaa_A Sepiapterin reductase; 23.6 2.3E+02 0.008 21.2 7.0 51 96-149 33-84 (259)
399 3nzo_A UDP-N-acetylglucosamine 23.6 2.2E+02 0.0074 23.3 7.0 54 80-133 42-100 (399)
400 3s55_A Putative short-chain de 23.5 1.4E+02 0.0048 22.9 5.5 50 97-150 35-96 (281)
401 3qlj_A Short chain dehydrogena 23.4 1.1E+02 0.0037 24.3 4.9 64 83-150 37-111 (322)
402 1zu4_A FTSY; GTPase, signal re 23.3 1.4E+02 0.0046 24.1 5.5 73 84-159 117-200 (320)
403 4ina_A Saccharopine dehydrogen 22.9 1.8E+02 0.006 24.2 6.3 50 83-132 10-63 (405)
404 3ilm_A ALR3790 protein; rhodan 22.9 1.6E+02 0.0055 20.3 5.3 35 93-127 53-87 (141)
405 4imr_A 3-oxoacyl-(acyl-carrier 22.9 1.3E+02 0.0045 23.2 5.2 49 97-149 58-106 (275)
406 3hm2_A Precorrin-6Y C5,15-meth 22.8 1.5E+02 0.005 20.5 5.1 35 88-122 112-146 (178)
407 2pd6_A Estradiol 17-beta-dehyd 22.5 72 0.0025 24.1 3.5 53 81-133 15-74 (264)
408 2hiy_A Hypothetical protein; C 22.5 45 0.0015 25.0 2.2 45 109-153 24-73 (183)
409 3mb5_A SAM-dependent methyltra 22.4 80 0.0028 23.7 3.8 44 87-130 178-223 (255)
410 1mxh_A Pteridine reductase 2; 22.3 1.9E+02 0.0066 21.9 6.1 51 82-133 20-73 (276)
411 3tox_A Short chain dehydrogena 22.2 87 0.003 24.4 4.0 36 97-133 33-68 (280)
412 4eso_A Putative oxidoreductase 21.9 1.3E+02 0.0045 22.8 5.0 48 97-151 33-80 (255)
413 3o5v_A X-Pro dipeptidase; crea 21.2 77 0.0026 21.5 3.2 22 105-126 1-22 (132)
414 3edm_A Short chain dehydrogena 21.1 1.2E+02 0.0043 23.0 4.7 51 97-151 33-84 (259)
415 3gk3_A Acetoacetyl-COA reducta 21.0 1.4E+02 0.0048 22.7 5.0 65 82-150 34-100 (269)
416 3lkz_A Non-structural protein 21.0 33 0.0011 28.3 1.2 27 80-107 103-129 (321)
417 4a6d_A Hydroxyindole O-methylt 20.8 3.3E+02 0.011 21.8 7.8 53 80-134 188-240 (353)
418 3jv7_A ADH-A; dehydrogenase, n 20.5 1.7E+02 0.0059 23.2 5.6 34 86-124 187-220 (345)
419 2hhg_A Hypothetical protein RP 20.4 1.8E+02 0.0061 19.6 5.0 33 96-128 86-118 (139)
420 1x1t_A D(-)-3-hydroxybutyrate 20.3 2.1E+02 0.0072 21.5 5.9 50 83-133 14-66 (260)
421 4dyv_A Short-chain dehydrogena 20.2 1E+02 0.0036 23.8 4.1 47 97-150 53-99 (272)
422 3rku_A Oxidoreductase YMR226C; 20.2 1.2E+02 0.0041 23.7 4.5 50 98-150 62-112 (287)
423 4iin_A 3-ketoacyl-acyl carrier 20.2 2.3E+02 0.0078 21.5 6.1 36 97-133 54-90 (271)
No 1
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=6.8e-32 Score=227.22 Aligned_cols=175 Identities=27% Similarity=0.325 Sum_probs=147.0
Q ss_pred hCCCCCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCC------------------CCceEEEEccCCCCCCChhhccCc
Q psy11559 7 SETQRPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKW------------------SKVGLVIYNSTVPIGATPEYLGGH 68 (189)
Q Consensus 7 ~~~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~------------------~p~~~~~~~~~~~~~~~~~~~~G~ 68 (189)
.+.++|+++|||++|++++++++.|++.|+.+++. +| +|+++.+.. ...+..+++|++|+
T Consensus 6 ~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-~~~~~~~~~~~~G~ 83 (309)
T 2b9e_A 6 PASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGR-ASSLDDLRALKGKHFLLDPLMPELLVFPA-QTDLHEHPLYRAGH 83 (309)
T ss_dssp ---CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEE-CSSHHHHHTCCTTEEEECSSSTTEEEECT-TCCCTTSHHHHTTS
T ss_pred CCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeec-cccccccccccccccccccCCCceEEeCC-CCCcccChHHHCCe
Confidence 34688999999999999999999999999988774 44 456666653 35788999999999
Q ss_pred eeeeCccchhh----------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 69 YILQGASKYWI----------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 69 ~~vQD~sS~l~----------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
+++||.+||++ |||||||++||++|+++|.|+|+|+++.|++.+++|++|+|+.||.++..|+.
T Consensus 84 ~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~ 163 (309)
T 2b9e_A 84 LILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFL 163 (309)
T ss_dssp EEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG
T ss_pred EEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChH
Confidence 99999999997 99999999999999888999999999999999999999999999999988875
Q ss_pred CCC-------C----------------------------------------------------------------CCCcH
Q psy11559 133 QYG-------K----------------------------------------------------------------PEENE 141 (189)
Q Consensus 133 ~~~-------~----------------------------------------------------------------~eENE 141 (189)
.+. . ++|||
T Consensus 164 ~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~gG~lvYsTCs~~~~Ene 243 (309)
T 2b9e_A 164 AVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENE 243 (309)
T ss_dssp GSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTTCCEEEEEESCCCGGGTH
T ss_pred hcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccCCCEEEEECCCCChHHhH
Confidence 431 0 89999
Q ss_pred HHHHHHHhhC-C-cEEEecCCCCCCCCccCC---CcceeeCcccccc
Q psy11559 142 AVVNYALRKR-D-VKLVPTGLDFGTEGFVNY---RQNKSYRPEMQEK 183 (189)
Q Consensus 142 ~vV~~~L~~~-~-~~l~~~~~~~~~~g~~~~---~~~~~~~p~~~~~ 183 (189)
+||.+||++| + |+++++...|...|+..+ .+++|++|+...+
T Consensus 244 ~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~ 290 (309)
T 2b9e_A 244 DVVRDALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLS 290 (309)
T ss_dssp HHHHHHHTTSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHHHSS
T ss_pred HHHHHHHHhCCCcEEEeccccccccccccccCCCCCeEEECCCCCCC
Confidence 9999999999 7 999987655655555443 4678999986554
No 2
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=3.4e-32 Score=229.21 Aligned_cols=179 Identities=34% Similarity=0.545 Sum_probs=156.9
Q ss_pred hhHHHhCCCCCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCCCCceEEEEccCCCCCCChhhccCceeeeCccchhh--
Q psy11559 2 SFLEASETQRPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKYWI-- 79 (189)
Q Consensus 2 ~~l~~~~~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~l~-- 79 (189)
+|++++++++|+++|||++|++++++.+.|++.|+.++++ +|+|+++++...+..+..++.|..|++++||.+||++
T Consensus 34 ~~~~~~~~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~ 112 (315)
T 1ixk_A 34 RIAEAMEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRV-PWAKEGFCLTREPFSITSTPEFLTGLIYIQEASSMYPPV 112 (315)
T ss_dssp HHHHHTTSCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEE-TTEEEEEEEEECSSCGGGSHHHHTTSEEECCHHHHHHHH
T ss_pred HHHHHcCCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeEC-CCCCceEEEeCCCCCcccChhHhcceEEEeCHHHHHHHH
Confidence 5899999999999999999999999999999999999986 8999999886533468899999999999999999996
Q ss_pred --------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC---------
Q psy11559 80 --------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK--------- 136 (189)
Q Consensus 80 --------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~--------- 136 (189)
||||+||++||+.+.+.|.|+|+|+++.|++.+++|++++|+.|+.+++.|+..++.
T Consensus 113 ~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 113 ALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKIL 192 (315)
T ss_dssp HHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEE
T ss_pred HhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEE
Confidence 999999999999998889999999999999999999999999999999999875320
Q ss_pred ----------------------------------------------------------CCCcHHHHHHHHhhCCcEEEec
Q psy11559 137 ----------------------------------------------------------PEENEAVVNYALRKRDVKLVPT 158 (189)
Q Consensus 137 ----------------------------------------------------------~eENE~vV~~~L~~~~~~l~~~ 158 (189)
++|||+||.+||++++|+++++
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEEecC
Confidence 8999999999999999999887
Q ss_pred CCCCCCCCccCCC---------cceeeCcccccc
Q psy11559 159 GLDFGTEGFVNYR---------QNKSYRPEMQEK 183 (189)
Q Consensus 159 ~~~~~~~g~~~~~---------~~~~~~p~~~~~ 183 (189)
. ++.+|+..|. +++|++|+...+
T Consensus 273 ~--~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~ 304 (315)
T 1ixk_A 273 K--YGEPALTNPFGIELSEEIKNARRLYPDVHET 304 (315)
T ss_dssp C--SSEECCSSGGGCCCCGGGGGSEEECTTTSSS
T ss_pred C--ccccCcccccccccccccCCEEEECCCCCCc
Confidence 5 4446666652 456788876554
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.97 E-value=5.3e-32 Score=238.73 Aligned_cols=176 Identities=28% Similarity=0.393 Sum_probs=151.8
Q ss_pred hhHHHhCCC-CCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCCCCceEEEEccCCCCCCChhhccCceeeeCccchhh-
Q psy11559 2 SFLEASETQ-RPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKYWI- 79 (189)
Q Consensus 2 ~~l~~~~~~-~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~l~- 79 (189)
+|+++++++ ||++||||++|++++++.+.| |+..+++ +|+|+++++.. ...+..++.|.+|++++||++||++
T Consensus 20 ~~l~a~~~~~~~~~lRvN~lk~~~~~~~~~l---~~~~~~~-~~~~~g~~l~~-~~~~~~~~~~~~G~~~vQd~ss~l~a 94 (464)
T 3m6w_A 20 AFLKALTEGKRTYGLRVNTLKLPPEAFQRIS---PWPLRPI-PWCQEGFYYPE-EARPGPHPFFYAGLYYIQEPSAQAVG 94 (464)
T ss_dssp HHHHHHHTSCCCCEEEECTTTCCHHHHHHHC---SSCCEEE-TTEEEEEECCT-TCCCSSSHHHHTTSEEECCTTTHHHH
T ss_pred HHHHHcCCCCCCeEEEEcCCCCCHHHHHHHc---CCCceec-CCCCceEEECC-CCCcccChHHhCCeEEEECHHHHHHH
Confidence 589999999 999999999999999988776 7878886 99999999874 3468899999999999999999997
Q ss_pred ---------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--------
Q psy11559 80 ---------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK-------- 136 (189)
Q Consensus 80 ---------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~-------- 136 (189)
|||||||++||++|.++|.|+|+|+|+.|++.+++|++|+|+. |.+++.|++.+..
T Consensus 95 ~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~ 173 (464)
T 3m6w_A 95 VLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHR 173 (464)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEE
T ss_pred HhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCE
Confidence 9999999999999998899999999999999999999999998 8999888754320
Q ss_pred ------------------------------------------------------------CCCcHHHHHHHHhhC-CcEE
Q psy11559 137 ------------------------------------------------------------PEENEAVVNYALRKR-DVKL 155 (189)
Q Consensus 137 ------------------------------------------------------------~eENE~vV~~~L~~~-~~~l 155 (189)
++|||+||.+||++| ++++
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l 253 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRL 253 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEE
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCCcEE
Confidence 899999999999999 9999
Q ss_pred EecCCCCC-CCCccCC-------CcceeeCcccccc
Q psy11559 156 VPTGLDFG-TEGFVNY-------RQNKSYRPEMQEK 183 (189)
Q Consensus 156 ~~~~~~~~-~~g~~~~-------~~~~~~~p~~~~~ 183 (189)
+++....+ .+|..+| .+++|++|+...+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~ 289 (464)
T 3m6w_A 254 EDARLHPLFAPGVPEWGEGNPELLKTARLWPHRLEG 289 (464)
T ss_dssp ECCCCSTTSEECCGGGTTTCGGGGGSEEECTTTSSS
T ss_pred EecccccccccCcccccccccccCCeEEECCCCCCc
Confidence 99875433 3455444 3467999987544
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.97 E-value=3.2e-31 Score=234.86 Aligned_cols=179 Identities=33% Similarity=0.475 Sum_probs=149.7
Q ss_pred hhHHHhCCCCCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCCCCceEEEEccC---CCCCCChhhccCceeeeCccchh
Q psy11559 2 SFLEASETQRPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKWSKVGLVIYNST---VPIGATPEYLGGHYILQGASKYW 78 (189)
Q Consensus 2 ~~l~~~~~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~G~~~vQD~sS~l 78 (189)
+|++++++++|+++|||++|++++++.+.|++.|+.++++ +|+|+++++.... ..+..+++|..|.+++||++||+
T Consensus 28 ~~~~a~~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Qd~~s~l 106 (479)
T 2frx_A 28 DFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPI-PWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSML 106 (479)
T ss_dssp HHHHHHTSCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEE-TTEEEEEC---------CGGGSHHHHTTSEEECCHHHHH
T ss_pred HHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHcCCceeec-CCCCceEEEecCcccccCcccChHHhCcEEEEECHHHHH
Confidence 5899999999999999999999999999999999999986 9999998875321 16788999999999999999998
Q ss_pred h------------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC----C
Q psy11559 79 I------------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG----K 136 (189)
Q Consensus 79 ~------------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~----~ 136 (189)
+ |||||||++||++|+++|.|+|+|+++.|++.+++|++|+|+.||.+++.|++.++ .
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~ 186 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPE 186 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTT
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccc
Confidence 6 99999999999999888999999999999999999999999999999999987531 0
Q ss_pred ----------------------------------------------------------------CCCcHHHHHHHHhhC-
Q psy11559 137 ----------------------------------------------------------------PEENEAVVNYALRKR- 151 (189)
Q Consensus 137 ----------------------------------------------------------------~eENE~vV~~~L~~~- 151 (189)
++|||+||.+||++|
T Consensus 187 ~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 187 MFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp CEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred cCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCC
Confidence 899999999999999
Q ss_pred Cc-EEEecCCCCCCCCcc---CCCcceeeCcccccc
Q psy11559 152 DV-KLVPTGLDFGTEGFV---NYRQNKSYRPEMQEK 183 (189)
Q Consensus 152 ~~-~l~~~~~~~~~~g~~---~~~~~~~~~p~~~~~ 183 (189)
++ +++++...+ +|.. ...+++|++|+...+
T Consensus 267 ~~~~~~~~~~~~--~~~~~~~~~~g~~r~~P~~~~~ 300 (479)
T 2frx_A 267 DAVEFLPLGDLF--PGANKALTEEGFLHVFPQIYDC 300 (479)
T ss_dssp TTEEECCCTTSS--TTGGGGBCTTSCEEECTTTTTS
T ss_pred Cceecccccccc--cccccccccCCeEEECCCCCCc
Confidence 76 665554222 2322 234557889987654
No 5
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.97 E-value=2.7e-31 Score=233.81 Aligned_cols=172 Identities=24% Similarity=0.315 Sum_probs=145.0
Q ss_pred hhHHHhCCCCC-eEEEEcCCCCCHHHHHHHHHHCCCeee---ecCCCCCceEEEEccCCCCCCChhhccCceeeeCccch
Q psy11559 2 SFLEASETQRP-LTIRTNTLKTRRRDLAQALVNRGVNLD---PIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKY 77 (189)
Q Consensus 2 ~~l~~~~~~~p-~~lRvN~~k~~~~~~~~~L~~~g~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~ 77 (189)
+|++++++++| ++||||++|+ +++.+.+ |+.++ ++ +|+|++++ . ..+..++.|..|++++||++||
T Consensus 26 ~~~~a~~~~~~~~~lRvN~lk~--~~~~~~~---~~~~~~~~~~-~~~~~~~~--~--~~~~~~~~~~~G~~~vQd~ss~ 95 (456)
T 3m4x_A 26 DFFSALEQGSVKKGFRWNPLKP--AGLDMVQ---TYHSEELQPA-PYSNEGFL--G--TVNGKSFLHQAGYEYSQEPSAM 95 (456)
T ss_dssp HHHHHHHHCCCCCEEECCTTST--THHHHHH---HHTCSSCCBC-TTCTTEEE--S--CCCTTSHHHHTTSCEECCTTTH
T ss_pred HHHHHcCCCCCCcEEEEcCccH--HHHHHhc---CCcccccCCC-CCCcceEE--c--CCCCCChHHhCCcEEEECHHHH
Confidence 58999999999 9999999998 5555543 45555 76 89999988 3 3468899999999999999999
Q ss_pred hh----------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC-----
Q psy11559 78 WI----------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK----- 136 (189)
Q Consensus 78 l~----------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~----- 136 (189)
++ |||||||++||++|.+.|.|+|+|+++.|++.+++|++|+|+.||.+++.|++.+..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~ 175 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGF 175 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcccc
Confidence 97 999999999999999889999999999999999999999999999999998765320
Q ss_pred ---------------------------------------------------------------CCCcHHHHHHHHhhCCc
Q psy11559 137 ---------------------------------------------------------------PEENEAVVNYALRKRDV 153 (189)
Q Consensus 137 ---------------------------------------------------------------~eENE~vV~~~L~~~~~ 153 (189)
++|||+||.+||++|+|
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~ 255 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPV 255 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSE
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCC
Confidence 89999999999999999
Q ss_pred EEEecCCCCC-CCCccCC------CcceeeCcccccc
Q psy11559 154 KLVPTGLDFG-TEGFVNY------RQNKSYRPEMQEK 183 (189)
Q Consensus 154 ~l~~~~~~~~-~~g~~~~------~~~~~~~p~~~~~ 183 (189)
+++++....+ .+|...| .+++|++||...+
T Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~ 292 (456)
T 3m4x_A 256 TIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHKDQG 292 (456)
T ss_dssp EEECCCCSSCCEECCGGGSSSTTGGGSEEECTTTSSS
T ss_pred EEEeccccccccccccccccccccCCeEEECCCCCCC
Confidence 9999864333 3455444 3467999987654
No 6
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.97 E-value=3.3e-29 Score=206.80 Aligned_cols=176 Identities=34% Similarity=0.479 Sum_probs=144.7
Q ss_pred hHHHhCCCCCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCCCCceEEEEccCCCCCCChhhccCceeeeCccchhh---
Q psy11559 3 FLEASETQRPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKYWI--- 79 (189)
Q Consensus 3 ~l~~~~~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~l~--- 79 (189)
++++++.++|+++|||++|++++++.+.|++.|+.+++ +|+|+++.+...+..+..++.|..|++++||.+||++
T Consensus 1 ~m~~~~~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~ 78 (274)
T 3ajd_A 1 MMIVYKGEKMQFIRVNTLKINPEVLKKRLENKGVVLEK--TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIV 78 (274)
T ss_dssp --------CCEEEEECTTTCCHHHHHHHHHTTTCEEEE--CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHH
T ss_pred ChhhhCCCCCeEEEEeCCCCCHHHHHHHHHHCCCeecC--CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHH
Confidence 35677889999999999999999999999999998877 6899999883323568889999999999999999987
Q ss_pred -------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC-------C----
Q psy11559 80 -------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY-------G---- 135 (189)
Q Consensus 80 -------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~-------~---- 135 (189)
|||||||.++++++.+.|.|+|+|+++.+++.+++|++++|+.|+.+++.|+..+ .
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCC
Confidence 9999999999999987799999999999999999999999998999988886432 0
Q ss_pred -----------------------------C---------------------------CCCcHHHHHHHHhhC-CcEEEec
Q psy11559 136 -----------------------------K---------------------------PEENEAVVNYALRKR-DVKLVPT 158 (189)
Q Consensus 136 -----------------------------~---------------------------~eENE~vV~~~L~~~-~~~l~~~ 158 (189)
. ++|||++|++||++| +++++++
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIII 238 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEEEECC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcEEecC
Confidence 1 899999999999998 9999987
Q ss_pred CCCCCCCCccCC----CcceeeCcccc
Q psy11559 159 GLDFGTEGFVNY----RQNKSYRPEMQ 181 (189)
Q Consensus 159 ~~~~~~~g~~~~----~~~~~~~p~~~ 181 (189)
... ..+|+..| .+++|++|+..
T Consensus 239 ~~~-~~~~~~~~~~~~~~~~~~~P~~~ 264 (274)
T 3ajd_A 239 KAN-EFKGINIKEGYIKGTLRVFPPNE 264 (274)
T ss_dssp CST-TCTTSCEEECSSTTCEEECTTSC
T ss_pred ccc-cccCcccccccCCCeEEECCCCC
Confidence 632 23566555 35679999854
No 7
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.96 E-value=3.9e-29 Score=219.73 Aligned_cols=177 Identities=24% Similarity=0.300 Sum_probs=155.7
Q ss_pred hhHHHhC-CCCCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCCCCceEEEEccCCCCCCChhhccCceeeeCccchhh-
Q psy11559 2 SFLEASE-TQRPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKYWI- 79 (189)
Q Consensus 2 ~~l~~~~-~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~l~- 79 (189)
+|+++++ +++|+++|||++|++++++.+.|++.|+.+++. +|+|+++.+.. ...+..++.|..|++++||.+||++
T Consensus 175 ~~~~a~~~~~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~G~~~~qd~~s~l~~ 252 (450)
T 2yxl_A 175 DFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVRS-ERVPTILKIKG-PYNFDTSSAFNEGKIIVQEEASAVAS 252 (450)
T ss_dssp HHHHHHHCCCCEEEEEECTTTCCHHHHHHHHHHTTCCEEEC-SSCTTEEEEES-CCCTTSCHHHHTTSEEECCHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEEcCCCCCHHHHHHHHHhCCccceec-CccCceEEeCC-CCCcccCchhhCceEEecCchhHHHH
Confidence 5889999 999999999999999999999999999999885 99999999864 3678999999999999999999987
Q ss_pred ---------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC-----C---
Q psy11559 80 ---------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG-----K--- 136 (189)
Q Consensus 80 ---------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~-----~--- 136 (189)
|||||||++|++.++++|.|+|+|+++.|++.+++|++++|+.|+.+++.|+..++ .
T Consensus 253 ~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD 332 (450)
T 2yxl_A 253 IVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVAD 332 (450)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEE
T ss_pred HhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCC
Confidence 99999999999999877999999999999999999999999999999999987643 1
Q ss_pred -------------------------------------------------------------CCCcHHHHHHHHhhC-CcE
Q psy11559 137 -------------------------------------------------------------PEENEAVVNYALRKR-DVK 154 (189)
Q Consensus 137 -------------------------------------------------------------~eENE~vV~~~L~~~-~~~ 154 (189)
++|||++|.+||++| +|+
T Consensus 333 ~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 333 KVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFK 412 (450)
T ss_dssp EEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCE
T ss_pred EEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCE
Confidence 899999999999999 999
Q ss_pred EEecCCCCCCCCccCCCcceeeCcccccc
Q psy11559 155 LVPTGLDFGTEGFVNYRQNKSYRPEMQEK 183 (189)
Q Consensus 155 l~~~~~~~~~~g~~~~~~~~~~~p~~~~~ 183 (189)
++++...+ ++.. ..++++++|+...+
T Consensus 413 ~~~~~~~~--~~~~-~~~~~~~~P~~~~~ 438 (450)
T 2yxl_A 413 LVPLKSPY--DPGF-LEGTMRAWPHRHST 438 (450)
T ss_dssp ECCCCSSS--EECS-STTCEEECHHHHSS
T ss_pred Eeeccccc--cccc-CCCeEEECCCCCCC
Confidence 99876543 2222 23556899987654
No 8
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.95 E-value=3.4e-27 Score=206.07 Aligned_cols=170 Identities=24% Similarity=0.296 Sum_probs=146.5
Q ss_pred hhHHHhCCCCCeEEEEcCCCCCHHHHHHHHHHCCCeeeecCCCCCceEEEEccCCCCCCChhhccCceeeeCccchhh--
Q psy11559 2 SFLEASETQRPLTIRTNTLKTRRRDLAQALVNRGVNLDPIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKYWI-- 79 (189)
Q Consensus 2 ~~l~~~~~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~l~-- 79 (189)
+|+++++.++|+++|||++|++++++.+.|.+.|+..++. +|+|+++++.. ...+..++.|..|++++||.+||++
T Consensus 163 ~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~G~~~~qd~~s~~~~~ 240 (429)
T 1sqg_A 163 SIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPH-ADYPDAVRLET-PAPVHALPGFEDGWVTVQDASAQGCMT 240 (429)
T ss_dssp HHHHHHTSCCCEEEEECTTTCCHHHHHHHHHHTTCCEECC-TTCTTEEEESS-CCCGGGSTTGGGTSEEECCHHHHTHHH
T ss_pred HHHHhCCCCCCeEEEEcCCCCCHHHHHHHHHhCCCceeec-CCCCCEEEECC-CCCcccChHHhCCCeEeeCHHHHHHHH
Confidence 5789999999999999999999999999999999999885 89999998864 3578889999999999999999997
Q ss_pred --------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC-----C----
Q psy11559 80 --------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG-----K---- 136 (189)
Q Consensus 80 --------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~-----~---- 136 (189)
|||||||+++++.+.+ |.|+|+|+++.|++.+++|++++|+. +.+...|+..++ .
T Consensus 241 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~-~~~~~~D~~~~~~~~~~~~fD~ 318 (429)
T 1sqg_A 241 WLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK-ATVKQGDGRYPSQWCGEQQFDR 318 (429)
T ss_dssp HHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC-CEEEECCTTCTHHHHTTCCEEE
T ss_pred HcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC-eEEEeCchhhchhhcccCCCCE
Confidence 9999999999999875 89999999999999999999999984 678888876532 0
Q ss_pred ------------------------------------------------------------CCCcHHHHHHHHhhC-CcEE
Q psy11559 137 ------------------------------------------------------------PEENEAVVNYALRKR-DVKL 155 (189)
Q Consensus 137 ------------------------------------------------------------~eENE~vV~~~L~~~-~~~l 155 (189)
++|||++|.+||++| +|++
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~ 398 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAEL 398 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEE
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEE
Confidence 899999999999999 9999
Q ss_pred EecCCCCCCCCccCCCcceeeCcccccc
Q psy11559 156 VPTGLDFGTEGFVNYRQNKSYRPEMQEK 183 (189)
Q Consensus 156 ~~~~~~~~~~g~~~~~~~~~~~p~~~~~ 183 (189)
++ . |.....+ .+++|+...+
T Consensus 399 ~~-~------~~~~~~~-~~~~P~~~~~ 418 (429)
T 1sqg_A 399 CE-T------GTPEQPG-KQNLPGAEEG 418 (429)
T ss_dssp CS-S------BCSSSBS-EEECCCTTSC
T ss_pred eC-C------CCCCCCe-EEECCCCCCC
Confidence 87 1 1112223 4888886554
No 9
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.93 E-value=5.1e-27 Score=200.99 Aligned_cols=131 Identities=20% Similarity=0.159 Sum_probs=99.9
Q ss_pred hhHHHhCCCCCeEEEEcCCCCCHHHHHHHHHHCCCeee-------------------ec-CCC-CCceE-EEEccCCCCC
Q psy11559 2 SFLEASETQRPLTIRTNTLKTRRRDLAQALVNRGVNLD-------------------PI-GKW-SKVGL-VIYNSTVPIG 59 (189)
Q Consensus 2 ~~l~~~~~~~p~~lRvN~~k~~~~~~~~~L~~~g~~~~-------------------~~-~~~-~p~~~-~~~~~~~~~~ 59 (189)
.|..++++|++..+|||+.+ +.+++.+.|++.|..-. +. .+| ++..+ .+....+++.
T Consensus 37 ~~r~aL~~~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~~g~~~ 115 (359)
T 4fzv_A 37 SIRVSLLSEQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPASWACSPNLRCFTFDRGDIS 115 (359)
T ss_dssp HHHHHHTSCCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHHHHSCSSCCEEECCTTCCC
T ss_pred HHHHHHcCcchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCcccccCCccceEEecCCCChh
Confidence 46678999999999999985 56888888888765310 00 000 11111 1111236777
Q ss_pred CChhhccC-----ceeeeCccchhh----------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHH
Q psy11559 60 ATPEYLGG-----HYILQGASKYWI----------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHR 118 (189)
Q Consensus 60 ~~~~~~~G-----~~~vQD~sS~l~----------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r 118 (189)
..+.|..| .||+||.|||+| |||||||+|||++|. .|.|+|+|++++|++.|++|++|
T Consensus 116 ~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r 194 (359)
T 4fzv_A 116 RFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHS 194 (359)
T ss_dssp CCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHH
T ss_pred cCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHH
Confidence 78877776 478888999998 999999999999875 58999999999999999999999
Q ss_pred hCC------CeEEEEcCCCCCC
Q psy11559 119 LGV------INSVVTCLDGRQY 134 (189)
Q Consensus 119 ~g~------~nv~~~~~Da~~~ 134 (189)
+|+ .|+.+++.|++.+
T Consensus 195 ~~~~~~~~~~~v~v~~~D~~~~ 216 (359)
T 4fzv_A 195 YVPEEIRDGNQVRVTSWDGRKW 216 (359)
T ss_dssp HSCTTTTTSSSEEEECCCGGGH
T ss_pred hhhhhhccCCceEEEeCchhhc
Confidence 987 3799999999874
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.74 E-value=3e-08 Score=79.76 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=64.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC------C-----------------
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG------K----------------- 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~------~----------------- 136 (189)
||||++|.++|++++++|.|+|+|+++.+++.|.+..++. .|+.+...|++... .
T Consensus 85 ~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~~~~~~i 162 (232)
T 3id6_C 85 AASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDI 162 (232)
T ss_dssp CTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEEEECCCCTTHHHH
T ss_pred ecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEEEecCCChhHHHH
Confidence 9999999999999998999999999999987777666553 58999999987521 1
Q ss_pred -----------------------------CCCcHHHHHHHHhhCCcEEEec
Q psy11559 137 -----------------------------PEENEAVVNYALRKRDVKLVPT 158 (189)
Q Consensus 137 -----------------------------~eENE~vV~~~L~~~~~~l~~~ 158 (189)
|+||.+.+.++|++++|++++.
T Consensus 163 l~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~ 213 (232)
T 3id6_C 163 AIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQI 213 (232)
T ss_dssp HHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEE
Confidence 7889888888998888888774
No 11
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.22 E-value=7.1e-08 Score=78.59 Aligned_cols=129 Identities=10% Similarity=0.061 Sum_probs=73.4
Q ss_pred hHHHhCCCCCeEEEEcCCCCCHHHHH-HHHHHCCCeeeecCCCCCceEEEEccCCCCCCChhhccCceeeeCccchhh--
Q psy11559 3 FLEASETQRPLTIRTNTLKTRRRDLA-QALVNRGVNLDPIGKWSKVGLVIYNSTVPIGATPEYLGGHYILQGASKYWI-- 79 (189)
Q Consensus 3 ~l~~~~~~~p~~lRvN~~k~~~~~~~-~~L~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~G~~~vQD~sS~l~-- 79 (189)
++.++++.++++.|+|+.+...+... +.|...++.... ......+.... +........+..+...+++..++++
T Consensus 28 i~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (275)
T 1yb2_A 28 ILVSEDEYGKFDESTNSILVKGKMHHLGISRVIEPGDEL--IVSGKSFIVSD-FSPMYFGRVIRRNTQIISEIDASYIIM 104 (275)
T ss_dssp EEECSSCCEEEETTTTEEEC-CCEEECC-CCCCCTTCEE--EETTEEEEEEC-CCGGGHHHHC-----------------
T ss_pred EEEecCCCCceeccccceeccCCccchhheeCCCCCcEE--EECCeEEEEeC-CCHHHHHhhccccccccChhhHHHHHH
Confidence 45678888999999996654332211 112112220000 00111222221 1112222344445555555444332
Q ss_pred --------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh-CCCeEEEEcCCCCCC
Q psy11559 80 --------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL-GVINSVVTCLDGRQY 134 (189)
Q Consensus 80 --------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~-g~~nv~~~~~Da~~~ 134 (189)
||+|+.|.++++.+.+.+.|+++|+++..++..++++++. |..++.+...|+...
T Consensus 105 ~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 174 (275)
T 1yb2_A 105 RCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF 174 (275)
T ss_dssp -CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC
T ss_pred HcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc
Confidence 9999999999998766689999999999999999999999 988899999998763
No 12
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.16 E-value=2.2e-05 Score=61.34 Aligned_cols=55 Identities=20% Similarity=0.089 Sum_probs=49.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC-----CCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG-----VINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g-----~~nv~~~~~Da~~~ 134 (189)
||+|++|.+++..+++.+.|+++|+++..++..++++++.| ..++.+...|+...
T Consensus 86 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (226)
T 1i1n_A 86 SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG 145 (226)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC
T ss_pred CCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC
Confidence 99999999999998777899999999999999999999977 46899999998753
No 13
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.39 E-value=0.00024 Score=61.06 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=48.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe--EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN--SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n--v~~~~~Da~~ 133 (189)
||+|+.+.++|..+++.+.|+++|+++..++.+++|+++.|+.+ +.+++.|+..
T Consensus 61 aGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~ 116 (392)
T 3axs_A 61 SASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANF 116 (392)
T ss_dssp CTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHH
Confidence 99999999999987544689999999999999999999999986 9999999843
No 14
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.36 E-value=0.00031 Score=56.05 Aligned_cols=54 Identities=13% Similarity=0.051 Sum_probs=49.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
+++|+.|..+|..+.+.+.|+++|+++..++..++++++.|+. +|.+...|+..
T Consensus 72 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 72 TLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 9999999999998876789999999999999999999999997 79999998754
No 15
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.35 E-value=0.0014 Score=53.79 Aligned_cols=55 Identities=16% Similarity=0.095 Sum_probs=49.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~ 136 (189)
|+.|+-|.++|.. +...|+|+|+++.-++.+++|+++.|+.+ +.+.+.|++++..
T Consensus 134 aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~ 189 (278)
T 3k6r_A 134 AGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG 189 (278)
T ss_dssp CTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC
T ss_pred CcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc
Confidence 9999999999875 24589999999999999999999999975 9999999998754
No 16
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.33 E-value=0.00044 Score=52.53 Aligned_cols=56 Identities=13% Similarity=0.210 Sum_probs=51.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
+|+|.-|..++..+++.+.++++|+++..++..++++++.|+ .++.+...|+..+.
T Consensus 31 cG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 31 CGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 899999999999887678999999999999999999999998 68999999987653
No 17
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.31 E-value=0.00039 Score=53.93 Aligned_cols=54 Identities=11% Similarity=0.019 Sum_probs=49.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~ 133 (189)
+++|+.|.++|+.+.+.+.|+++|+++..++..++++++.|+.+ +.+...|+..
T Consensus 67 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (223)
T 3duw_A 67 TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALD 121 (223)
T ss_dssp CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 99999999999988756899999999999999999999999975 9999999853
No 18
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.31 E-value=0.00057 Score=52.34 Aligned_cols=53 Identities=17% Similarity=0.139 Sum_probs=48.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
||+|.-+..++... +.+.|+++|+++..++..++++++.|+.++.+...|+..
T Consensus 49 ~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 101 (204)
T 3e05_A 49 AGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE 101 (204)
T ss_dssp CTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT
T ss_pred CCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh
Confidence 99999999999874 457999999999999999999999999889999999854
No 19
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.29 E-value=0.00043 Score=53.92 Aligned_cols=54 Identities=9% Similarity=0.041 Sum_probs=49.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
+++|..|.++|..+.+.+.|+++|+++..++..++++++.|+. +|.+...|+..
T Consensus 67 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 67 AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 9999999999998876789999999999999999999999997 59999999744
No 20
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.28 E-value=0.00031 Score=56.25 Aligned_cols=53 Identities=11% Similarity=0.085 Sum_probs=47.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
||+|.-|.++|...+++|+|+|+|+++..++.+++++++. .|+..+..|++..
T Consensus 86 ~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p 138 (233)
T 4df3_A 86 IASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFP 138 (233)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCG
T ss_pred CcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCc
Confidence 9999999999999999999999999999999999988765 4788888888763
No 21
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.27 E-value=0.00047 Score=54.25 Aligned_cols=54 Identities=11% Similarity=-0.021 Sum_probs=49.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC--eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI--NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~~~~Da~~ 133 (189)
++.|..|..||..+.+.|.|+++|+++..++..++++++.|+. +|.+...|+..
T Consensus 65 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 65 PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 8999999999998877799999999999999999999999987 79999998865
No 22
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.20 E-value=0.00077 Score=53.38 Aligned_cols=54 Identities=17% Similarity=0.070 Sum_probs=49.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|+.|..+|..+.+.|.|+++|+++..++..++++++.|+. +|.+...|+..
T Consensus 79 ~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 79 VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 9999999999999876799999999999999999999999996 59999998754
No 23
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.19 E-value=0.00069 Score=53.03 Aligned_cols=54 Identities=15% Similarity=0.070 Sum_probs=48.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~ 134 (189)
++.|..|.+++..+. .+.|+++|+++..++..++++++.|+. ++.+...|+..+
T Consensus 63 ~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 63 TAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred CCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 899999999999875 579999999999999999999999986 599999998764
No 24
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.18 E-value=0.0001 Score=58.95 Aligned_cols=54 Identities=7% Similarity=-0.006 Sum_probs=49.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|..|..||..+...|.|+++|+++..++..++++++.|+. +|.+...|+..
T Consensus 69 ~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 69 TFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp SCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 9999999999999876799999999999999999999999996 79999999854
No 25
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.18 E-value=0.00064 Score=58.06 Aligned_cols=53 Identities=17% Similarity=0.083 Sum_probs=48.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh---------------CCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL---------------GVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~---------------g~~nv~~~~~Da~~ 133 (189)
||+|+.+.++|..+++ ..|+++|+++..++.+++|+++. |+.++.+++.|+..
T Consensus 56 aGtG~~~l~~a~~~~~-~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~ 123 (378)
T 2dul_A 56 SATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANR 123 (378)
T ss_dssp CTTSHHHHHHHHHSSC-SEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHH
T ss_pred CchhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHH
Confidence 9999999999998753 57999999999999999999999 98889999999854
No 26
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.08 E-value=0.0013 Score=51.96 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=50.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~ 134 (189)
+++|+-|.+++..+++.+.++++|+++..++..++++++.|+.+ +.+...|+...
T Consensus 102 ~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 157 (255)
T 3mb5_A 102 VGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG 157 (255)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC
T ss_pred CCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc
Confidence 99999999999988777899999999999999999999999987 99999998764
No 27
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.07 E-value=0.001 Score=51.56 Aligned_cols=54 Identities=11% Similarity=0.136 Sum_probs=49.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~ 133 (189)
++.|..|.+++..+.+.+.|+++|+++..++..++++++.|+.+ +.+...|+..
T Consensus 73 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 73 TFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKD 127 (225)
T ss_dssp CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred CcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHH
Confidence 99999999999988767899999999999999999999999975 9999998743
No 28
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.96 E-value=0.0021 Score=49.66 Aligned_cols=51 Identities=10% Similarity=-0.004 Sum_probs=47.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
|++|.-|..+|.. .+.|+++|+++..++..++++++.|+. ++.+...|+..
T Consensus 64 cG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 64 GGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPA 115 (204)
T ss_dssp CTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTG
T ss_pred CCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhh
Confidence 9999999999886 479999999999999999999999998 89999999877
No 29
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=96.87 E-value=0.0027 Score=48.60 Aligned_cols=52 Identities=15% Similarity=0.030 Sum_probs=48.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
|++|..|.+++.. .+.|+++|+++..++..+++++++|+.|+.+...|+...
T Consensus 86 ~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 86 TGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG 137 (210)
T ss_dssp CTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred CCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 9999999999987 479999999999999999999999999999999998764
No 30
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.87 E-value=0.0011 Score=56.46 Aligned_cols=71 Identities=15% Similarity=-0.022 Sum_probs=58.7
Q ss_pred ChhhccCceeeeCccchhh-------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-C-eEE
Q psy11559 61 TPEYLGGHYILQGASKYWI-------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-I-NSV 125 (189)
Q Consensus 61 ~~~~~~G~~~vQD~sS~l~-------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~-nv~ 125 (189)
...++.|.|..|....+++ |+.|+.|.++|.. +.+.|+++|+++..++..++|++..|+ . ++.
T Consensus 197 ~~~~~tgff~~~~~~~~~l~~~~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~ 274 (396)
T 3c0k_A 197 QHGHKTGYYLDQRDSRLATRRYVENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLSKAE 274 (396)
T ss_dssp TTSSTTSSCGGGHHHHHHHHHHCTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred cccccCCcCcCHHHHHHHHHHhhCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceE
Confidence 3456778887776665544 9999999999974 245899999999999999999999999 7 899
Q ss_pred EEcCCCCC
Q psy11559 126 VTCLDGRQ 133 (189)
Q Consensus 126 ~~~~Da~~ 133 (189)
+...|+..
T Consensus 275 ~~~~D~~~ 282 (396)
T 3c0k_A 275 FVRDDVFK 282 (396)
T ss_dssp EEESCHHH
T ss_pred EEECCHHH
Confidence 99999744
No 31
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.85 E-value=0.0021 Score=51.31 Aligned_cols=54 Identities=15% Similarity=0.047 Sum_probs=49.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|..|..+|..+.+.+.|+++|+++..++..++++++.|+. +|.+...|+..
T Consensus 88 ~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 142 (247)
T 1sui_A 88 VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALP 142 (247)
T ss_dssp CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 9999999999999876689999999999999999999999985 69999988743
No 32
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.84 E-value=0.0018 Score=54.23 Aligned_cols=56 Identities=18% Similarity=0.090 Sum_probs=51.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||+|+-+..+|...++.+.|+++|+++.-++..++|+++.|+.++.+.+.|+.+++
T Consensus 212 cGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~ 267 (354)
T 3tma_A 212 TGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP 267 (354)
T ss_dssp CTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG
T ss_pred CCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc
Confidence 99999999998877456899999999999999999999999989999999998864
No 33
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=96.81 E-value=0.0023 Score=47.90 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=46.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|+|.-|..+|.. .+.|+|+|+|+.-++..++++++.|+.++.+...|...
T Consensus 31 cG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~ 81 (185)
T 3mti_A 31 MGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHEN 81 (185)
T ss_dssp CTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGG
T ss_pred CCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHH
Confidence 8999999999876 57999999999999999999999999889988877665
No 34
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.77 E-value=0.0039 Score=48.48 Aligned_cols=51 Identities=14% Similarity=0.209 Sum_probs=44.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
||+|..|.+++...+ .|.|+|+|+|+..++.+.+..++. .|+..+..|+..
T Consensus 66 cGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~ 116 (210)
T 1nt2_A 66 AASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASK 116 (210)
T ss_dssp CTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTC
T ss_pred CcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCC
Confidence 999999999999887 789999999999988888777754 478888888876
No 35
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.77 E-value=0.0017 Score=52.02 Aligned_cols=54 Identities=7% Similarity=-0.034 Sum_probs=48.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|+|.-+..+|... +.+.|+++|+++.+++.++++++++|+.||.+...|+..+
T Consensus 89 ~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~ 142 (249)
T 3g89_A 89 TGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVL 142 (249)
T ss_dssp CTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHH
T ss_pred CCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHh
Confidence 99999999998875 4579999999999999999999999999999999988654
No 36
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=96.77 E-value=0.0072 Score=48.18 Aligned_cols=79 Identities=14% Similarity=0.127 Sum_probs=63.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCCC----------------------
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYGK---------------------- 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~---------------------- 136 (189)
++.|-=+..+|.. +..+.|+|+|+++.-++..++|+++.|+.+ |.+...|+.....
T Consensus 30 tGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg~lI~~IL 108 (230)
T 3lec_A 30 SDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGGRLIADIL 108 (230)
T ss_dssp CSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH
T ss_pred CchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCchHHHHHHH
Confidence 6777777777764 335689999999999999999999999975 9999999865321
Q ss_pred ----------------CCCcHHHHHHHHhhCCcEEEecC
Q psy11559 137 ----------------PEENEAVVNYALRKRDVKLVPTG 159 (189)
Q Consensus 137 ----------------~eENE~vV~~~L~~~~~~l~~~~ 159 (189)
|..+++.|...|.+++|++++..
T Consensus 109 ~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 109 NNDIDKLQHVKTLVLQPNNREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp HHTGGGGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHhCcCCEEEEECCCChHHHHHHHHHCCCEEEEEE
Confidence 66788889988998888887743
No 37
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.76 E-value=0.0037 Score=50.26 Aligned_cols=55 Identities=16% Similarity=0.193 Sum_probs=49.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 134 (189)
+++|.-|..++..+++.+.++++|+++..++..++++++.|+ .++.+...|+...
T Consensus 121 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 121 VGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp CTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred CcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 999999999999877678999999999999999999999998 5799999888653
No 38
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=96.76 E-value=0.0037 Score=48.51 Aligned_cols=53 Identities=9% Similarity=-0.082 Sum_probs=48.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|.|.-|..||... +...++++|+|+..++..++++++.|+.|+.++..|+..
T Consensus 47 cG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~ 99 (213)
T 2fca_A 47 TGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT 99 (213)
T ss_dssp CTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG
T ss_pred cCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH
Confidence 89999999999875 357999999999999999999999999999999999875
No 39
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.75 E-value=0.0013 Score=55.77 Aligned_cols=69 Identities=19% Similarity=0.042 Sum_probs=57.0
Q ss_pred hhhccCceeeeCccchhh------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcC
Q psy11559 62 PEYLGGHYILQGASKYWI------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCL 129 (189)
Q Consensus 62 ~~~~~G~~~vQD~sS~l~------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~ 129 (189)
..+..|.|+.|....+++ |+.|+.|.++|.. .+.|+++|+++..++..++|++..|+.|+.+...
T Consensus 188 ~~~~~g~f~~~~~~~~~~~~~~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~ 264 (382)
T 1wxx_A 188 AGQKTGAYLDQRENRLYMERFRGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEA 264 (382)
T ss_dssp TTSCCCCCGGGHHHHHHGGGCCEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES
T ss_pred hcccCccccchHHHHHHHHhcCCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEC
Confidence 456677777775554322 9999999999986 3689999999999999999999999988999999
Q ss_pred CCCC
Q psy11559 130 DGRQ 133 (189)
Q Consensus 130 Da~~ 133 (189)
|+..
T Consensus 265 d~~~ 268 (382)
T 1wxx_A 265 NAFD 268 (382)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 8754
No 40
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.75 E-value=0.0027 Score=52.66 Aligned_cols=69 Identities=13% Similarity=0.027 Sum_probs=54.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC-----------CCCcHHHHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK-----------PEENEAVVNYAL 148 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~-----------~eENE~vV~~~L 148 (189)
+||||=|..+++... .+.|+++|+++.+++..++++++.|+.+|.+..+|+..++. ..+-+.+.+.+.
T Consensus 131 cG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~d~~~~l~el~ 209 (298)
T 3fpf_A 131 GGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIH 209 (298)
T ss_dssp CCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCSCHHHHHHHHH
T ss_pred CCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCccCHHHHHHHHH
Confidence 899987765544432 47999999999999999999999999889999999987643 345556666665
Q ss_pred h
Q psy11559 149 R 149 (189)
Q Consensus 149 ~ 149 (189)
+
T Consensus 210 r 210 (298)
T 3fpf_A 210 R 210 (298)
T ss_dssp H
T ss_pred H
Confidence 5
No 41
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.75 E-value=0.0033 Score=49.34 Aligned_cols=54 Identities=6% Similarity=-0.120 Sum_probs=48.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~ 134 (189)
++.|.-|..+|... ..+.|+++|+++..++..++++++.|+. ++.+...|+..+
T Consensus 80 ~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 80 TAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp CSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred CchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 99999999999843 3689999999999999999999999986 799999999663
No 42
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.75 E-value=0.0038 Score=48.36 Aligned_cols=55 Identities=13% Similarity=-0.003 Sum_probs=49.7
Q ss_pred cCCchHHHHHHHhcC----CCcEEEEEcCChHHHHHHHHHHHHhC-----CCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMK----NTGVLFANDVSKERSKAIVGNFHRLG-----VINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~----~~g~v~A~D~~~~Rl~~l~~~l~r~g-----~~nv~~~~~Da~~~ 134 (189)
+++|..|.+++..++ +.+.|+++|+++..++..++++++.| ..++.+...|+...
T Consensus 89 ~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 152 (227)
T 2pbf_A 89 SGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQV 152 (227)
T ss_dssp CTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGC
T ss_pred CCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhc
Confidence 999999999999876 56799999999999999999999998 67899999998764
No 43
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.70 E-value=0.0044 Score=48.76 Aligned_cols=55 Identities=9% Similarity=-0.015 Sum_probs=50.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh-CCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL-GVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~-g~~nv~~~~~Da~~~ 134 (189)
++.|.-|..++..+++.+.|+++|+++..++..++++++. |..++.+...|+...
T Consensus 105 ~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 105 TGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred CCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 8999999999998776789999999999999999999998 877899999998775
No 44
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.70 E-value=0.0045 Score=49.80 Aligned_cols=53 Identities=15% Similarity=-0.029 Sum_probs=48.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|+|..+..++..+. .+.++++|+|+..++..++|+++.|+.++.+...|...
T Consensus 118 ~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~ 170 (276)
T 2b3t_A 118 TGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFS 170 (276)
T ss_dssp CTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTG
T ss_pred CCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhh
Confidence 999999999998764 57999999999999999999999999899999999865
No 45
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.66 E-value=0.0043 Score=50.17 Aligned_cols=54 Identities=13% Similarity=0.043 Sum_probs=49.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
|+.|+-|..+|.... .+.|+|+|+++.-++.+++|++..|+.|+.+...|+..+
T Consensus 128 cG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~ 181 (272)
T 3a27_A 128 AGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV 181 (272)
T ss_dssp CTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC
T ss_pred CcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc
Confidence 999999999998754 569999999999999999999999999999999999876
No 46
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.62 E-value=0.0022 Score=55.03 Aligned_cols=69 Identities=17% Similarity=0.014 Sum_probs=55.6
Q ss_pred ChhhccCceeeeCccchhh--------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEE
Q psy11559 61 TPEYLGGHYILQGASKYWI--------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVV 126 (189)
Q Consensus 61 ~~~~~~G~~~vQD~sS~l~--------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~ 126 (189)
...++.|.|+.|..+.+++ |++|+.|.++|.. + ..|+|+|+|+..++..++|+++.|+.+ .+
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~-g--a~V~avDis~~al~~a~~n~~~ng~~~-~~ 265 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMVRPGERVLDVYSYVGGFALRAARK-G--AYALAVDKDLEALGVLDQAALRLGLRV-DI 265 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTCCTTCEEEEESCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCCC-EE
T ss_pred hhccccCcCCCHHHHHHHHHHHhcCCCeEEEcccchhHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHhCCCC-cE
Confidence 4567888888888777655 9999999999984 2 349999999999999999999999873 34
Q ss_pred EcCCCCC
Q psy11559 127 TCLDGRQ 133 (189)
Q Consensus 127 ~~~Da~~ 133 (189)
.+.|+..
T Consensus 266 ~~~D~~~ 272 (393)
T 4dmg_A 266 RHGEALP 272 (393)
T ss_dssp EESCHHH
T ss_pred EEccHHH
Confidence 4666643
No 47
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.60 E-value=0.005 Score=50.76 Aligned_cols=55 Identities=20% Similarity=0.307 Sum_probs=50.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.|+-|.+++......+.|+++|+++..++..++++++.|+.++.+...|+...
T Consensus 84 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 84 GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred CCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 9999999999988664588999999999999999999999999999999999874
No 48
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.59 E-value=0.015 Score=44.23 Aligned_cols=54 Identities=19% Similarity=0.046 Sum_probs=47.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. +.+.++++|+++..++..+++++..|+.++.+...|...+.
T Consensus 69 ~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 122 (205)
T 3grz_A 69 TGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV 122 (205)
T ss_dssp CTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC
T ss_pred CCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC
Confidence 8999888887763 34699999999999999999999999988999999987754
No 49
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=96.57 E-value=0.0034 Score=48.17 Aligned_cols=54 Identities=13% Similarity=0.011 Sum_probs=48.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|..|.+++..+...+.|+++|+++..++..++++++.|+. ++.+...|+..
T Consensus 65 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 65 DGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp CGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 8999999999998765689999999999999999999999986 48999888854
No 50
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.56 E-value=0.0024 Score=52.85 Aligned_cols=53 Identities=8% Similarity=-0.016 Sum_probs=48.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.||.|..+++... .+.|+|+|+|+.-++..+++++..| .++.++..|+..+
T Consensus 35 ~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l 87 (301)
T 1m6y_A 35 VGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREA 87 (301)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGH
T ss_pred CCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHH
Confidence 899999999999875 5899999999999999999999998 7899999998654
No 51
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.55 E-value=0.0062 Score=48.68 Aligned_cols=55 Identities=9% Similarity=-0.004 Sum_probs=49.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh-C--CCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL-G--VINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~-g--~~nv~~~~~Da~~~ 134 (189)
|+.|.-|.+++..+++.+.++++|+++..++..+++++.. | ..++.+...|+...
T Consensus 108 ~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~ 165 (280)
T 1i9g_A 108 AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS 165 (280)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC
T ss_pred ccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc
Confidence 8999999999998776789999999999999999999998 7 67899999998765
No 52
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.55 E-value=0.0026 Score=54.18 Aligned_cols=52 Identities=15% Similarity=-0.057 Sum_probs=46.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
|+.|+.|.++|.. +.+.|+++|+++.-++..++|+++.|+. ++.+...|+..
T Consensus 226 ~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~ 278 (396)
T 2as0_A 226 TYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE 278 (396)
T ss_dssp CTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHH
Confidence 9999999999975 3458999999999999999999999997 89999998743
No 53
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.50 E-value=0.0031 Score=49.66 Aligned_cols=54 Identities=7% Similarity=-0.082 Sum_probs=47.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.|.-+..+|... ..+.|+++|+++..++.+++++++.|+.||.+...|+..+
T Consensus 79 ~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 132 (240)
T 1xdz_A 79 AGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETF 132 (240)
T ss_dssp SSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHH
T ss_pred CCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHh
Confidence 89999899888754 3579999999999999999999999998899999887654
No 54
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=96.49 E-value=0.008 Score=46.26 Aligned_cols=54 Identities=15% Similarity=0.057 Sum_probs=49.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.|.-+..+|.... .+.++++|+++..++..++++++.|+.|+.++..|+..+
T Consensus 50 cG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~ 103 (214)
T 1yzh_A 50 SGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL 103 (214)
T ss_dssp CTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG
T ss_pred cCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH
Confidence 899999999998764 579999999999999999999999999999999999864
No 55
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.48 E-value=0.0061 Score=51.51 Aligned_cols=72 Identities=14% Similarity=0.066 Sum_probs=54.2
Q ss_pred hhhccCceeeeCccchhh---------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEE
Q psy11559 62 PEYLGGHYILQGASKYWI---------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVV 126 (189)
Q Consensus 62 ~~~~~G~~~vQD~sS~l~---------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~ 126 (189)
..|.+++...|+.++++. .+-.|..+..+...+..+.|+++|+++..++..++|+++.|+.+|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlGG~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~ 225 (373)
T 2qm3_A 146 HEFDQAYVTPETTVARVILMHTRGDLENKDIFVLGDDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEI 225 (373)
T ss_dssp GGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEESCTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEE
T ss_pred hhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEE
Confidence 456677777776665443 33125555444444545799999999999999999999999988999
Q ss_pred EcCCCCC
Q psy11559 127 TCLDGRQ 133 (189)
Q Consensus 127 ~~~Da~~ 133 (189)
...|+..
T Consensus 226 ~~~D~~~ 232 (373)
T 2qm3_A 226 FTFDLRK 232 (373)
T ss_dssp ECCCTTS
T ss_pred EEChhhh
Confidence 9999987
No 56
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.46 E-value=0.0091 Score=47.14 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=48.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--------CCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--------GVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--------g~~nv~~~~~Da~~ 133 (189)
+|.|+-+.++|.... .+.++++|+|+..++.++++++.. |+.|+.++..|+..
T Consensus 58 cG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~ 118 (246)
T 2vdv_E 58 CGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMK 118 (246)
T ss_dssp CTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTS
T ss_pred CCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHH
Confidence 999999999998753 569999999999999999999988 88899999999976
No 57
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=96.45 E-value=0.016 Score=46.04 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=62.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCC-CC------C---------------
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQ-YG------K--------------- 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~-~~------~--------------- 136 (189)
++.|-=+..+|.. +..+.|+|+|+++.-++..++|+++.|+.+ |.+...|+.. ++ -
T Consensus 24 tGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~Gg~~i~~Il 102 (225)
T 3kr9_A 24 SDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGGRLIARIL 102 (225)
T ss_dssp CSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH
T ss_pred CCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCCChHHHHHHH
Confidence 7788777777764 445689999999999999999999999974 9999999842 22 1
Q ss_pred ----------------CCCcHHHHHHHHhhCCcEEEec
Q psy11559 137 ----------------PEENEAVVNYALRKRDVKLVPT 158 (189)
Q Consensus 137 ----------------~eENE~vV~~~L~~~~~~l~~~ 158 (189)
|..++..|...|.+++|++++.
T Consensus 103 ~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 103 EEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp HHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEE
Confidence 5567888888888888887764
No 58
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.45 E-value=0.0078 Score=46.08 Aligned_cols=56 Identities=16% Similarity=0.159 Sum_probs=51.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++...+..+.++++|+++.-++..++++...|+.++.+...|+..++
T Consensus 46 ~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 101 (219)
T 3dh0_A 46 TGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP 101 (219)
T ss_dssp CTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS
T ss_pred cCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC
Confidence 89999999999987666799999999999999999999999989999999998754
No 59
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=96.42 E-value=0.0083 Score=47.74 Aligned_cols=53 Identities=4% Similarity=-0.050 Sum_probs=47.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~ 134 (189)
||+|.-+..+++.. .+.|+++|+++..++..++|+++.|+. ++.+...|+..+
T Consensus 58 ~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 58 SGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKI 111 (259)
T ss_dssp CTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGG
T ss_pred CchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHh
Confidence 99999999988863 349999999999999999999999987 599999998764
No 60
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.39 E-value=0.008 Score=46.98 Aligned_cols=53 Identities=17% Similarity=0.108 Sum_probs=48.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|.|.-+..+|.... ...|+++|+++..+...++++++.|+.|+.+...|+..
T Consensus 43 cG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~ 95 (218)
T 3dxy_A 43 FGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVE 95 (218)
T ss_dssp CTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHH
T ss_pred eeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHH
Confidence 899999999998753 57899999999999999999999999999999999866
No 61
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.39 E-value=0.006 Score=47.20 Aligned_cols=53 Identities=8% Similarity=-0.061 Sum_probs=47.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~ 132 (189)
++.|.-|..++..+...+.|+++|+++..++..++++++.|+ .++.+...|+.
T Consensus 78 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 131 (229)
T 2avd_A 78 TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL 131 (229)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHH
Confidence 899999999998876568999999999999999999999998 47999888874
No 62
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.39 E-value=0.0064 Score=47.48 Aligned_cols=52 Identities=15% Similarity=0.039 Sum_probs=47.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 134 (189)
||+|+.|.+++.. .+.|+++|+++..++..++++++.|+ .++.+...|+..+
T Consensus 87 cG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 139 (241)
T 3gdh_A 87 CGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL 139 (241)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH
T ss_pred cccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh
Confidence 9999999999985 27999999999999999999999999 5899999998654
No 63
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.38 E-value=0.009 Score=45.72 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=48.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|++|.-|..++...+..+.++++|+++..++..++++...|+.++.+...|+..
T Consensus 86 ~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 86 TGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL 139 (215)
T ss_dssp CTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG
T ss_pred CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc
Confidence 899999999999886557999999999999999999999999899999999754
No 64
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.37 E-value=0.012 Score=44.75 Aligned_cols=55 Identities=11% Similarity=-0.010 Sum_probs=49.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++.... .+.++++|+++..++.+++++++.|+.++.+...|+..+.
T Consensus 74 ~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 128 (207)
T 1jsx_A 74 TGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP 128 (207)
T ss_dssp CTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC
T ss_pred CCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC
Confidence 899999999998763 5799999999999999999999999988999999998765
No 65
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.37 E-value=0.0082 Score=47.05 Aligned_cols=54 Identities=15% Similarity=0.130 Sum_probs=48.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~ 133 (189)
++.|.-|..++..+...+.|+++|+++..++..++++++.|+.+ +.+...|+..
T Consensus 69 ~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 69 TFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp CTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 89999999999988656899999999999999999999999976 8998888743
No 66
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.36 E-value=0.003 Score=49.19 Aligned_cols=54 Identities=11% Similarity=0.028 Sum_probs=48.2
Q ss_pred cCCchHHHHHHHhcCC-----CcEEEEEcCChHHHHHHHHHHHHhC-----CCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKN-----TGVLFANDVSKERSKAIVGNFHRLG-----VINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~-----~g~v~A~D~~~~Rl~~l~~~l~r~g-----~~nv~~~~~Da~~ 133 (189)
+++|..|.++++.++. ++.|+++|+++..++..++++++.| ..++.+...|+..
T Consensus 93 ~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 156 (227)
T 1r18_A 93 SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK 156 (227)
T ss_dssp CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG
T ss_pred CCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc
Confidence 9999999999997753 4699999999999999999999987 6789999999876
No 67
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.34 E-value=0.01 Score=45.93 Aligned_cols=52 Identities=17% Similarity=0.097 Sum_probs=46.7
Q ss_pred cC-CchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CA-PHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AA-PGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
|| .|.-+..++... .+.|+++|+++.-++..++++++.|+ ++.+...|+..+
T Consensus 64 ~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 116 (230)
T 3evz_A 64 TGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII 116 (230)
T ss_dssp CTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS
T ss_pred CCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh
Confidence 89 999999998876 47999999999999999999999999 899999997544
No 68
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.34 E-value=0.011 Score=47.74 Aligned_cols=54 Identities=19% Similarity=0.099 Sum_probs=48.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
|+.|+-|..+|.... . .|+|+|+++.-++..++|++..|+.+ +.+.+.|+..+.
T Consensus 134 cG~G~~~~~la~~~~-~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~ 188 (278)
T 2frn_A 134 AGIGHLSLPIAVYGK-A-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP 188 (278)
T ss_dssp CTTTTTHHHHHHHTC-C-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC
T ss_pred ccCCHHHHHHHHhCC-C-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc
Confidence 999999999998643 2 79999999999999999999999986 999999998875
No 69
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.29 E-value=0.01 Score=48.31 Aligned_cols=52 Identities=21% Similarity=0.172 Sum_probs=47.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~ 133 (189)
+|.|.-+..++.. +...|+|+|+|+.-++..++|+++.|+.+ +.+...|...
T Consensus 132 ~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 132 TGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE 184 (284)
T ss_dssp CTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG
T ss_pred CchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh
Confidence 9999999999987 46799999999999999999999999986 9999999865
No 70
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=96.29 E-value=0.016 Score=46.56 Aligned_cols=77 Identities=9% Similarity=0.007 Sum_probs=61.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCC-------CC---------------
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQY-------GK--------------- 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~-------~~--------------- 136 (189)
++.|-=+..+|.. +..+.|+|+|+++.-++..++|+++.|+.+ |.+...|+... +-
T Consensus 30 tGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg~lI~~IL 108 (244)
T 3gnl_A 30 SDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTLIRTIL 108 (244)
T ss_dssp CSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH
T ss_pred CccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCchHHHHHHH
Confidence 6777777777764 334689999999999999999999999975 99999987642 21
Q ss_pred ----------------CCCcHHHHHHHHhhCCcEEEe
Q psy11559 137 ----------------PEENEAVVNYALRKRDVKLVP 157 (189)
Q Consensus 137 ----------------~eENE~vV~~~L~~~~~~l~~ 157 (189)
|.-++.-|...|.+++|++++
T Consensus 109 ~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 109 EEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp HHTGGGGTTCCEEEEEESSCHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHhCCCCEEEEEcCCChHHHHHHHHHCCCEEEE
Confidence 556788888888888887755
No 71
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.27 E-value=0.0047 Score=56.79 Aligned_cols=70 Identities=11% Similarity=-0.002 Sum_probs=58.1
Q ss_pred hhhccCceeeeCccchhh-------------cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC--eEEE
Q psy11559 62 PEYLGGHYILQGASKYWI-------------CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI--NSVV 126 (189)
Q Consensus 62 ~~~~~G~~~vQD~sS~l~-------------AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~ 126 (189)
..++.|.|.-|....+++ |+.|+.|.++|. .+...|+++|+|+..++..++|+++.|+. ++.+
T Consensus 517 ~~~~tG~f~d~r~~r~~l~~~~~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~ 594 (703)
T 3v97_A 517 DYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRL 594 (703)
T ss_dssp SSSSCSCCGGGHHHHHHHHHHCTTCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEE
T ss_pred ccccCCCcccHHHHHHHHHHhcCCCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEE
Confidence 456778777777666554 999999998886 33457999999999999999999999987 7999
Q ss_pred EcCCCCC
Q psy11559 127 TCLDGRQ 133 (189)
Q Consensus 127 ~~~Da~~ 133 (189)
++.|+.+
T Consensus 595 i~~D~~~ 601 (703)
T 3v97_A 595 IQADCLA 601 (703)
T ss_dssp EESCHHH
T ss_pred EecCHHH
Confidence 9999754
No 72
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.23 E-value=0.012 Score=44.22 Aligned_cols=53 Identities=9% Similarity=0.051 Sum_probs=46.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
|+.|.-|..+++. +.+.|+++|+|+.-++..++|+++.|+.++.+.+.|+..+
T Consensus 53 cG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 105 (189)
T 3p9n_A 53 AGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAV 105 (189)
T ss_dssp CTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHH
T ss_pred CCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHH
Confidence 8999988877763 3458999999999999999999999998899999997653
No 73
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.22 E-value=0.008 Score=45.72 Aligned_cols=53 Identities=15% Similarity=0.093 Sum_probs=46.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||.|+-+..++.. +.+.++++|+++..++..++++++.|+ ++.+...|+..++
T Consensus 58 ~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~ 110 (207)
T 1wy7_A 58 AGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN 110 (207)
T ss_dssp CTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC
T ss_pred CCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC
Confidence 9999999988875 235899999999999999999999998 7999999998764
No 74
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=96.20 E-value=0.009 Score=46.84 Aligned_cols=53 Identities=13% Similarity=0.059 Sum_probs=47.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~ 132 (189)
++.|.-|..++..+...+.|+++|+++..++..++++++.|+. ++.+...|+.
T Consensus 81 ~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 81 VFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 8999999999998866689999999999999999999999986 5888888863
No 75
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.18 E-value=0.011 Score=48.86 Aligned_cols=55 Identities=11% Similarity=0.048 Sum_probs=48.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC-----------CCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG-----------VINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g-----------~~nv~~~~~Da~~~ 134 (189)
+++|.-|..++...+..+.|+++|+++..++..+++++++| ..++.+...|+...
T Consensus 114 ~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 114 SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 179 (336)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred CCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHc
Confidence 99999999999987767899999999999999999999875 35799999998764
No 76
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.08 E-value=0.011 Score=51.00 Aligned_cols=52 Identities=12% Similarity=-0.095 Sum_probs=47.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~~nv~~~~~Da~~~ 134 (189)
|+.|+-|.++|.. .+.|+++|+|+..++..++|++++ |+.++.+++.|+..+
T Consensus 102 cG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~ 155 (410)
T 3ll7_A 102 GGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY 155 (410)
T ss_dssp CSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS
T ss_pred CCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh
Confidence 8999999988864 369999999999999999999999 998999999998764
No 77
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.06 E-value=0.011 Score=43.45 Aligned_cols=51 Identities=18% Similarity=0.070 Sum_probs=44.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~ 132 (189)
+++|.-+.+++... +.+.|+++|+++..++..++++++.|+. ++ .+..|+.
T Consensus 34 ~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~ 85 (178)
T 3hm2_A 34 GGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAP 85 (178)
T ss_dssp TTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTT
T ss_pred CCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchH
Confidence 88999888888775 3579999999999999999999999998 78 7778874
No 78
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.05 E-value=0.0072 Score=49.61 Aligned_cols=53 Identities=13% Similarity=0.011 Sum_probs=43.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|+|.-|..+++. .+.|+|+|+++.-++.+++++++.|..|+.+...|+.+++
T Consensus 51 ~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 51 CGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp CTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred CcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 8999999998875 3689999999999999999999989889999999998764
No 79
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=95.89 E-value=0.023 Score=45.68 Aligned_cols=57 Identities=14% Similarity=-0.003 Sum_probs=50.1
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~ 136 (189)
+|.|.-|..|+......| .|+++|+|+.=++..+++++..|.. +|.+.+.|...++.
T Consensus 79 cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~ 137 (261)
T 4gek_A 79 CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI 137 (261)
T ss_dssp CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC
T ss_pred CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc
Confidence 999999999998876545 8999999999999999999998875 69999999988764
No 80
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=95.89 E-value=0.023 Score=46.33 Aligned_cols=54 Identities=7% Similarity=-0.050 Sum_probs=49.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
+|+|..+..+++.. .+.|+++|+++..++..++++++.|+. ++.+...|+..++
T Consensus 126 cG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 126 CGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp CTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 99999999999875 368999999999999999999999987 7999999998864
No 81
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=95.85 E-value=0.019 Score=44.87 Aligned_cols=50 Identities=24% Similarity=0.218 Sum_probs=46.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDG 131 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da 131 (189)
++.|.-|..++.... +.|+++|+++..++..+++++..|+.++.+...|+
T Consensus 100 ~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 149 (235)
T 1jg1_A 100 TGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG 149 (235)
T ss_dssp CTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred CCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc
Confidence 899999999998875 78999999999999999999999998899999997
No 82
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.83 E-value=0.02 Score=43.74 Aligned_cols=52 Identities=10% Similarity=0.000 Sum_probs=45.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC--CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV--INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~--~nv~~~~~Da~~ 133 (189)
||.|+-|..++.. ..+.|+++|+|+.-++..++|++..|+ .++.+...|+..
T Consensus 62 cGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~ 115 (201)
T 2ift_A 62 AGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLD 115 (201)
T ss_dssp CTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHH
T ss_pred CccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHH
Confidence 8999988877764 235899999999999999999999998 689999998754
No 83
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=95.81 E-value=0.031 Score=43.74 Aligned_cols=54 Identities=11% Similarity=0.036 Sum_probs=48.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
++.|.-+..++.... +.|+++|+++.-++..+++++..|+.+ +.+...|+..++
T Consensus 55 ~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 109 (257)
T 3f4k_A 55 CGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP 109 (257)
T ss_dssp CTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS
T ss_pred CCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 899999999998863 499999999999999999999999976 999999998765
No 84
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.80 E-value=0.014 Score=45.20 Aligned_cols=52 Identities=17% Similarity=0.126 Sum_probs=46.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
||+|.-|.+++..++..+.|+++|+++..++.+++++++. .|+.+...|+..
T Consensus 82 ~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~ 133 (227)
T 1g8a_A 82 IASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATK 133 (227)
T ss_dssp TTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTC
T ss_pred ccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCC
Confidence 9999999999998876789999999999999999988765 679999999876
No 85
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=95.75 E-value=0.025 Score=44.14 Aligned_cols=52 Identities=8% Similarity=-0.013 Sum_probs=43.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC---CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV---INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~---~nv~~~~~Da~~ 133 (189)
=|-|..|..+|.+ . .|+|+++|.++.+.+..++++++.|+ .+|.+..+|+..
T Consensus 37 iGtGySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~ 91 (202)
T 3cvo_A 37 YGSGGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGP 91 (202)
T ss_dssp ESCSHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSS
T ss_pred ECchHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchh
Confidence 3447877788773 3 58999999999999999999999995 579999999754
No 86
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=95.75 E-value=0.024 Score=43.37 Aligned_cols=52 Identities=12% Similarity=0.033 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|+.|.-|..++... ...|+++|+|+.-++..++|+++.|+.++.+.+.|+..
T Consensus 63 cG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~ 114 (202)
T 2fpo_A 63 AGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS 114 (202)
T ss_dssp CTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH
T ss_pred CCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHH
Confidence 89999888777642 34899999999999999999999999889999999765
No 87
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=95.71 E-value=0.017 Score=44.94 Aligned_cols=51 Identities=10% Similarity=0.159 Sum_probs=45.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
||+|.-|.+++...+ .+.|+++|+++..++.+++++++. .|+.+...|+..
T Consensus 83 cG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~ 133 (230)
T 1fbn_A 83 ASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANK 133 (230)
T ss_dssp CCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTC
T ss_pred ccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCC
Confidence 999999999999876 689999999999999999987765 689998999876
No 88
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.71 E-value=0.032 Score=43.37 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=47.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. .+.++++|+++.+++..+++++..|+ .++.+...|.....
T Consensus 100 ~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 100 TGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp CTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC
T ss_pred CCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc
Confidence 8899999999887 47999999999999999999999998 67999999887643
No 89
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=95.70 E-value=0.038 Score=43.16 Aligned_cols=54 Identities=15% Similarity=-0.096 Sum_probs=48.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
+++|.-|..++... .+.++++|+|+.-++..+++++..|+. ++.+...|+..++
T Consensus 45 cG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 45 SGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp CTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred CCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 89999899999876 358999999999999999999999985 7999999998764
No 90
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.66 E-value=0.028 Score=41.24 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=45.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|+.|.-+..++. ....++++|+++.-++..++++++.|+.++.+...|...
T Consensus 44 ~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 44 CGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp CCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred CCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 889998888877 457999999999999999999999999889999988754
No 91
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=95.66 E-value=0.018 Score=45.07 Aligned_cols=53 Identities=13% Similarity=0.009 Sum_probs=46.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.|.-|..++... +.++++|+++..++..+++++..|+.++.+...|+..++
T Consensus 30 cG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 82 (239)
T 1xxl_A 30 AGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP 82 (239)
T ss_dssp CTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC
T ss_pred cCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC
Confidence 88898888887653 489999999999999999999999999999999998764
No 92
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=95.59 E-value=0.032 Score=44.13 Aligned_cols=54 Identities=13% Similarity=0.017 Sum_probs=48.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++.. ..+.|+++|+++.-++..+++++..|+. ++.+...|...++
T Consensus 55 cG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 55 CGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp CTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 8999999988876 3569999999999999999999999986 4999999998875
No 93
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.39 E-value=0.046 Score=40.74 Aligned_cols=53 Identities=15% Similarity=-0.065 Sum_probs=46.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..+++. ...++++|+++.-++..+++++..|+.++.+...|...++
T Consensus 41 ~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 93 (199)
T 2xvm_A 41 CGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT 93 (199)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC
T ss_pred CCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC
Confidence 8899988888875 3589999999999999999999999988999999987754
No 94
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.34 E-value=0.051 Score=43.04 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=49.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++... +.+.++++|+++.-++..++++...|+.++.+...|+..++
T Consensus 46 ~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 46 CGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP 100 (276)
T ss_dssp CTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC
T ss_pred CCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC
Confidence 89999999998874 35799999999999999999999999999999999998764
No 95
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=95.30 E-value=0.037 Score=40.86 Aligned_cols=52 Identities=8% Similarity=-0.008 Sum_probs=45.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
+|.|.-+..++.. +.+.|+++|+++.-++..+++++..|+. ++.+...|+..
T Consensus 40 cG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 40 AGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER 92 (177)
T ss_dssp CTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH
T ss_pred CCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHH
Confidence 8999988888875 3469999999999999999999999986 79999999865
No 96
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.29 E-value=0.045 Score=41.32 Aligned_cols=54 Identities=15% Similarity=0.011 Sum_probs=47.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. ....++++|+++.-++..+++++..|+. ++.+...|+..++
T Consensus 52 ~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 106 (219)
T 3dlc_A 52 SGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP 106 (219)
T ss_dssp CTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS
T ss_pred CCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC
Confidence 8899988889887 3469999999999999999999999986 7999999998764
No 97
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.21 E-value=0.043 Score=40.44 Aligned_cols=51 Identities=20% Similarity=0.172 Sum_probs=44.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~ 133 (189)
++.|.-+..++... +.++++|+++..++..+++++..|+ .++.+...|...
T Consensus 42 ~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 42 CGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred CCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 88888888888754 7999999999999999999999998 678888888654
No 98
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=95.19 E-value=0.042 Score=43.20 Aligned_cols=53 Identities=11% Similarity=0.024 Sum_probs=47.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~ 133 (189)
++.|+-+..++.... .+.|+++|+++.-++..++++++.|+.+ +.+...|+..
T Consensus 74 ~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 74 TGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp CTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred CChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 899999999888753 3799999999999999999999999975 9999999765
No 99
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.12 E-value=0.056 Score=42.50 Aligned_cols=53 Identities=15% Similarity=0.027 Sum_probs=45.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+++|.-|..++... +.++++|+|+..++..++++++.|+.++.+...|+..++
T Consensus 46 cG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 46 TGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP 98 (260)
T ss_dssp CTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC
T ss_pred CCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC
Confidence 88888888887653 499999999999999999999999989999999998764
No 100
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=95.12 E-value=0.061 Score=41.74 Aligned_cols=52 Identities=13% Similarity=0.258 Sum_probs=45.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|+.|+-|.++++..++.+.|+++|+++.-++.+.+++++. .|+.+...|+..
T Consensus 86 ~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~ 137 (233)
T 2ipx_A 86 AASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARH 137 (233)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTC
T ss_pred ccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCC
Confidence 9999999999998766689999999998888888887775 678999999876
No 101
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.09 E-value=0.06 Score=39.69 Aligned_cols=52 Identities=15% Similarity=-0.004 Sum_probs=46.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe--EEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN--SVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n--v~~~~~Da~~~ 134 (189)
++.|.-+..++.. .+.++++|+++..++..++++...|+.+ +.+...|....
T Consensus 61 ~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 61 CGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp CTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred CCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 8889888888776 4699999999999999999999999987 99999998764
No 102
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=95.04 E-value=0.033 Score=46.99 Aligned_cols=55 Identities=15% Similarity=0.015 Sum_probs=48.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
+|.|+-+..+|... ..+.|+++|+|+.-++..++|+++.|+ .++.+.+.|+..++
T Consensus 226 CGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 226 CGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp CTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred CcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 99999888888764 346899999999999999999999999 57999999998764
No 103
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.074 Score=42.85 Aligned_cols=56 Identities=16% Similarity=0.095 Sum_probs=48.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~~nv~~~~~Da~~~~ 135 (189)
||+|.-+..+++.+.....|+++|+|+.-++..+++++.. +..++.+...|+..++
T Consensus 45 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 45 CGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp CTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC
Confidence 8999999999987655679999999999999999999987 3467999999998764
No 104
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=94.96 E-value=0.066 Score=39.53 Aligned_cols=52 Identities=13% Similarity=-0.043 Sum_probs=45.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|+-+..++.. +...|+++|+++.-++..+++++..|+. ++.+...|+..
T Consensus 53 cG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 53 SGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR 105 (187)
T ss_dssp CTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred CccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHH
Confidence 8999988888773 3468999999999999999999999984 79999998755
No 105
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=94.95 E-value=0.062 Score=43.38 Aligned_cols=54 Identities=11% Similarity=0.059 Sum_probs=48.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
+|.|+-+..++...+ ..|+++|+|+.-++..+++++..|+. ++.+...|...++
T Consensus 81 cG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 135 (302)
T 3hem_A 81 CGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFD 135 (302)
T ss_dssp CTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCC
T ss_pred ccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcC
Confidence 999999999998764 68999999999999999999999987 7999999998763
No 106
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=94.89 E-value=0.046 Score=44.36 Aligned_cols=53 Identities=8% Similarity=-0.108 Sum_probs=46.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
+|+|.-|..+++. .+.|+|+|+|+.-++.++++++..|. .++.+...|+.+++
T Consensus 37 ~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 37 PGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTD 90 (285)
T ss_dssp CTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSC
T ss_pred CcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceeccc
Confidence 8999999999986 35899999999999999999988877 58999999998764
No 107
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=94.73 E-value=0.059 Score=44.87 Aligned_cols=51 Identities=22% Similarity=0.050 Sum_probs=45.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe--EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN--SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n--v~~~~~Da~~ 133 (189)
|+.|+-|..+|.. + ..|+++|+|+.-++.+++|++..|+.+ +.+++.|+.+
T Consensus 162 cGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~ 214 (332)
T 2igt_A 162 GYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK 214 (332)
T ss_dssp CTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH
T ss_pred cccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHH
Confidence 9999999999874 2 399999999999999999999999875 9999999754
No 108
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=94.69 E-value=0.06 Score=45.29 Aligned_cols=51 Identities=14% Similarity=0.099 Sum_probs=45.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|+.|+-|..+|.. -+.|+++|+++.-++..++|++..|+.|+.+...|+.+
T Consensus 222 cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~ 272 (369)
T 3bt7_A 222 CGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEE 272 (369)
T ss_dssp CTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHH
T ss_pred CCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 9999999988863 35899999999999999999999999999999999743
No 109
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.59 E-value=0.052 Score=45.10 Aligned_cols=52 Identities=12% Similarity=0.062 Sum_probs=45.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
|+.|+-|.. |. ..+.|+|+|+++.-++.+++|++..|+ .++.+.+.|+..+.
T Consensus 204 ~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~ 256 (336)
T 2yx1_A 204 AGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD 256 (336)
T ss_dssp CTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred CccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc
Confidence 999998887 65 356899999999999999999999998 47999999998763
No 110
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=94.59 E-value=0.062 Score=39.02 Aligned_cols=50 Identities=16% Similarity=0.053 Sum_probs=43.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|+.|.-+..++... ..++++|+++.-++..+++++..|+ ++.+...|+..
T Consensus 50 cG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 99 (171)
T 1ws6_A 50 AGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEV 99 (171)
T ss_dssp CSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHH
T ss_pred CCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHH
Confidence 89999888888752 2399999999999999999999998 88999988754
No 111
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=94.55 E-value=0.058 Score=45.77 Aligned_cols=52 Identities=13% Similarity=0.017 Sum_probs=45.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC--eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI--NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~~~~Da~~ 133 (189)
|+.|+-|.++|.. +.+.|+++|+|+.-++..++|++..|+. |+.+.+.|+.+
T Consensus 221 cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~ 274 (385)
T 2b78_A 221 SYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD 274 (385)
T ss_dssp CTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH
T ss_pred eccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHH
Confidence 9999999999874 2348999999999999999999999997 89999999743
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=94.54 E-value=0.082 Score=41.62 Aligned_cols=53 Identities=9% Similarity=0.087 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHH------hCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHR------LGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r------~g~~nv~~~~~Da~~ 133 (189)
+|.|.-+..||... +...++++|+++..++..+++++. .+..||.++..|+..
T Consensus 55 cG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~ 113 (235)
T 3ckk_A 55 CGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK 113 (235)
T ss_dssp CTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT
T ss_pred cCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH
Confidence 89999999988765 356899999999999999988876 367899999999986
No 113
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=94.38 E-value=0.062 Score=41.37 Aligned_cols=49 Identities=10% Similarity=0.037 Sum_probs=44.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|+|.-|..++... +.++++|+++..++..++++...| ++.+...|+..
T Consensus 79 ~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~ 127 (231)
T 1vbf_A 79 TGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTL 127 (231)
T ss_dssp CTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGG
T ss_pred CCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCccc
Confidence 89999999999874 699999999999999999998887 78999999876
No 114
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=94.34 E-value=0.029 Score=42.80 Aligned_cols=41 Identities=10% Similarity=0.060 Sum_probs=33.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
||||+.|..+++. .+.|+|+|+++.. .+.++.+...|.+..
T Consensus 34 ~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 34 SSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKE 74 (191)
T ss_dssp CTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSS
T ss_pred ecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccCH
Confidence 8999999999886 6899999999852 245788888887663
No 115
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.32 E-value=0.077 Score=42.52 Aligned_cols=56 Identities=13% Similarity=0.008 Sum_probs=48.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
++.|.-+..+++...+.+.|+++|+++.-++..++++...+. |+.+...|+..++.
T Consensus 31 cG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 31 CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIEL 86 (284)
T ss_dssp CTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCC
T ss_pred CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCc
Confidence 889998888888775457999999999999999999998876 89999999988653
No 116
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.15 E-value=0.11 Score=42.79 Aligned_cols=51 Identities=8% Similarity=-0.131 Sum_probs=44.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|+|.=|..|++. .+.|+|+|+|+.-+..++++++ +..|+.++++|+.+++
T Consensus 59 ~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 59 LGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVD 109 (295)
T ss_dssp CTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSC
T ss_pred CCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCC
Confidence 8888989899886 3689999999999999999988 4568999999998865
No 117
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.99 E-value=0.1 Score=39.78 Aligned_cols=56 Identities=14% Similarity=0.085 Sum_probs=45.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHH----HHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNF----HRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l----~r~g~~nv~~~~~Da~~~~~ 136 (189)
||.|.-+..++... +.+.|+++|+|+.-++.+.+++ .+.|+.|+.+...|+..++.
T Consensus 36 cG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~ 95 (218)
T 3mq2_A 36 TGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPP 95 (218)
T ss_dssp CTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCS
T ss_pred CCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCC
Confidence 89999999999864 3579999999999888654443 34677899999999988764
No 118
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=93.98 E-value=0.19 Score=39.47 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=47.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
++.|.-+.+++... .+.++++|+|+.-++..+++++..|+. ++.+...|+..++
T Consensus 70 cG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 124 (273)
T 3bus_A 70 CGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP 124 (273)
T ss_dssp CTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred CCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC
Confidence 89999999998865 369999999999999999999999986 6999999998764
No 119
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=93.95 E-value=0.037 Score=44.95 Aligned_cols=56 Identities=9% Similarity=-0.091 Sum_probs=47.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
+|.|.-+..+|......+.|+++|+++.-++..++++.+.|+.+ +.+...|+..++
T Consensus 127 cG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 183 (305)
T 3ocj_A 127 CGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD 183 (305)
T ss_dssp CTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC
T ss_pred CCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC
Confidence 88888887776444456799999999999999999999999875 999999998765
No 120
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=93.93 E-value=0.027 Score=44.45 Aligned_cols=50 Identities=12% Similarity=-0.094 Sum_probs=40.8
Q ss_pred cCCchHHHHHHHh---cCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAAL---MKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~---~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+++|+.|..||.. +.+.+.|+++|+++..++..+ .++ .+|.+...|+..+
T Consensus 90 ~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 90 VYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITLHQGDCSDL 142 (236)
T ss_dssp CTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEEEECCSSCS
T ss_pred CCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEEEECcchhH
Confidence 9999999999998 566789999999998876554 222 5799999998774
No 121
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=93.91 E-value=0.11 Score=44.63 Aligned_cols=51 Identities=10% Similarity=-0.053 Sum_probs=47.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|.|.-|..+|.. .+.|+++|+++.-++..++|+++.|+.|+.+...|+..
T Consensus 295 cG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~ 345 (433)
T 1uwv_A 295 CGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEE 345 (433)
T ss_dssp CTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTS
T ss_pred CCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 9999999998875 46999999999999999999999999999999999876
No 122
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.84 E-value=0.15 Score=39.72 Aligned_cols=52 Identities=10% Similarity=-0.053 Sum_probs=45.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++.. ...++++|+|+.-++..++++...|. ++.+...|...++
T Consensus 50 cG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~ 101 (252)
T 1wzn_A 50 CGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIA 101 (252)
T ss_dssp CTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCC
T ss_pred CCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcc
Confidence 8899999988875 35899999999999999999998887 6888899987754
No 123
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=93.83 E-value=0.042 Score=42.97 Aligned_cols=55 Identities=18% Similarity=0.070 Sum_probs=45.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHH----HHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERS----KAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl----~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.=+..+|... ..+.|+++|+|+..+ ...++++++.|+.|+.....|+..++
T Consensus 33 CG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~ 91 (225)
T 3p2e_A 33 TGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLP 91 (225)
T ss_dssp CTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCC
T ss_pred ccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhh
Confidence 89998888888653 457899999997666 55588888889999999999998874
No 124
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=93.79 E-value=0.19 Score=40.15 Aligned_cols=54 Identities=11% Similarity=-0.033 Sum_probs=48.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
++.|.-+..++... ...++++|+++.-++..+++++..|+. ++.+...|+..++
T Consensus 91 cG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 91 AGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp CTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred CCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 89999999999876 358999999999999999999999985 6999999998765
No 125
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=93.75 E-value=0.18 Score=40.13 Aligned_cols=52 Identities=12% Similarity=0.033 Sum_probs=46.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||.|.-+..++.. ...|+++|+++.-++..++++.+.|+ ++.+...|+..++
T Consensus 129 cG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~ 180 (286)
T 3m70_A 129 CGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN 180 (286)
T ss_dssp CTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC
T ss_pred CCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc
Confidence 9999988888876 34899999999999999999999998 8999999998754
No 126
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=93.73 E-value=0.2 Score=38.11 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=44.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++... ..++++|+++.-++..+++++..+ .++.+...|...++
T Consensus 47 ~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~ 98 (227)
T 1ve3_A 47 CGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLS 98 (227)
T ss_dssp CTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCC
T ss_pred ccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCC
Confidence 88999888888752 289999999999999999999888 67899999988754
No 127
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=93.68 E-value=0.021 Score=43.05 Aligned_cols=51 Identities=20% Similarity=0.035 Sum_probs=26.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
+|.|.-+.+++... +.+.++++|+++..++..++++...|. ++.+...|+.
T Consensus 39 ~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~ 89 (215)
T 4dzr_A 39 TGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGI 89 (215)
T ss_dssp SSBCHHHHHHHHHC-TTEEEEEEECC--------------------CCHHHHH
T ss_pred CCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchH
Confidence 89999999999875 356999999999999999999999888 7888777764
No 128
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=93.66 E-value=0.11 Score=41.32 Aligned_cols=54 Identities=13% Similarity=-0.025 Sum_probs=47.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHH---hCCC-eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHR---LGVI-NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r---~g~~-nv~~~~~Da~~~ 134 (189)
++.|.-+..++.... ...|+++|+++.-++..++|++. .|+. ++.+...|...+
T Consensus 45 ~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 45 AGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp SSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred ChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 899999999988763 47999999999999999999998 8886 599999998775
No 129
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=93.63 E-value=0.17 Score=37.97 Aligned_cols=52 Identities=17% Similarity=-0.004 Sum_probs=44.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.|.-+..++.. ...++++|+++..++..++++...|. ++.+...|+..++
T Consensus 38 cG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~ 89 (202)
T 2kw5_A 38 EGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFD 89 (202)
T ss_dssp CSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBS
T ss_pred CCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcC
Confidence 7888888777764 35899999999999999999999887 7888899987754
No 130
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=93.46 E-value=0.13 Score=39.62 Aligned_cols=54 Identities=9% Similarity=-0.030 Sum_probs=46.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
++.|.-+..+++... .+.++++|+++.-++..++++...+ ++.+...|+..++.
T Consensus 53 ~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~ 106 (234)
T 3dtn_A 53 AGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDF 106 (234)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCC
T ss_pred CCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCC
Confidence 899999999998763 5799999999999999999887666 79999999988753
No 131
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=93.42 E-value=0.13 Score=40.90 Aligned_cols=53 Identities=13% Similarity=-0.022 Sum_probs=46.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++.. ...++++|+++.-++..+++++..|+ .++.+...|+..++
T Consensus 77 cG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 130 (285)
T 4htf_A 77 GGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA 130 (285)
T ss_dssp CTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG
T ss_pred CcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh
Confidence 8999888888876 46899999999999999999999998 58999999998875
No 132
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.31 E-value=0.1 Score=41.93 Aligned_cols=51 Identities=8% Similarity=0.036 Sum_probs=43.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|+|.=|..|++. .+.|+|+|+|+.-++.+++++.. ..++.+..+|+.+++
T Consensus 38 ~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 38 PGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFD 88 (255)
T ss_dssp CTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCC
T ss_pred ccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCC
Confidence 7888888888875 26899999999999999998875 468999999999875
No 133
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=93.21 E-value=0.11 Score=39.05 Aligned_cols=45 Identities=13% Similarity=0.049 Sum_probs=36.5
Q ss_pred cCCchHHHHHHHhcCC-CcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKN-TGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~-~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|||+.|.++++.+.+ .+.|+|+|+++.. ...++.+...|.....
T Consensus 31 cG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 31 CYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDN 76 (201)
T ss_dssp CTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTS
T ss_pred CCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchh
Confidence 8999999999998764 5899999999931 3457888889987653
No 134
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=93.20 E-value=0.2 Score=39.80 Aligned_cols=54 Identities=11% Similarity=0.029 Sum_probs=47.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
+|.|+-+.++++..+ ..|+++|+|+.-++..++++++.|+. ++.+...|...++
T Consensus 73 cG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 127 (287)
T 1kpg_A 73 CGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD 127 (287)
T ss_dssp CTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC
T ss_pred CcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC
Confidence 899999999996653 49999999999999999999999875 7999999987764
No 135
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=93.00 E-value=0.15 Score=41.49 Aligned_cols=53 Identities=9% Similarity=-0.032 Sum_probs=44.6
Q ss_pred cCCchHHHHHHHhcCC-CcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKN-TGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~-~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
+|+|.=|..|++.... .+.|+|+|+|+.-++.++++. ..++.+++.|+.+++.
T Consensus 51 ~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 51 PGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDF 104 (279)
T ss_dssp CTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCG
T ss_pred cccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCCh
Confidence 8999999999987643 367999999999999999983 4579999999988753
No 136
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=92.93 E-value=0.22 Score=40.32 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=47.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
+|.|+-+..++... ...|+++|+++..++..+++++..|+. ++.+...|...++
T Consensus 99 cG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 153 (318)
T 2fk8_A 99 CGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA 153 (318)
T ss_dssp CTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC
T ss_pred ccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC
Confidence 89999999998876 358999999999999999999999986 5899999987764
No 137
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=92.86 E-value=0.15 Score=40.33 Aligned_cols=52 Identities=12% Similarity=-0.065 Sum_probs=44.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
+|+|.=|..+++.. +.|+|+|+|+.-++.++++++. ..++.+...|+.+++.
T Consensus 39 ~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 39 SGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQFKF 90 (244)
T ss_dssp CTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGCCC
T ss_pred CCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhCCc
Confidence 88999999998863 6899999999999999998864 3589999999988754
No 138
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=92.76 E-value=0.29 Score=41.64 Aligned_cols=40 Identities=8% Similarity=0.020 Sum_probs=36.0
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYGK 136 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~ 136 (189)
..|+++|+|+.=++..++|+++.|+.+ +.+.+.|+.+++.
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~ 297 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT 297 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc
Confidence 469999999999999999999999975 9999999988753
No 139
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=92.68 E-value=0.31 Score=41.36 Aligned_cols=40 Identities=18% Similarity=0.125 Sum_probs=36.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYGK 136 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~ 136 (189)
..|+++|+++.=++..++|+++.|+. +|.+.+.|+.++..
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~ 298 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS 298 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc
Confidence 57999999999999999999999997 69999999988653
No 140
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.61 E-value=0.27 Score=41.31 Aligned_cols=55 Identities=16% Similarity=0.103 Sum_probs=48.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh-----C-C--CeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL-----G-V--INSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~-----g-~--~nv~~~~~Da~~~ 134 (189)
++.|.-+..++...+..+.|+++|+++.-++..++++++. | . .++.+...|+..+
T Consensus 92 cG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l 154 (383)
T 4fsd_A 92 CGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENL 154 (383)
T ss_dssp CTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCG
T ss_pred CccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHh
Confidence 8999999999998866789999999999999999999876 5 3 5899999998764
No 141
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.53 E-value=0.29 Score=37.12 Aligned_cols=55 Identities=13% Similarity=-0.037 Sum_probs=46.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-----eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-----NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-----nv~~~~~Da~~~~ 135 (189)
++.|.-+..+++.. +...++++|+++.-++..+++++..|+. ++.+...|....+
T Consensus 38 cG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 38 CGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp CTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred CCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 88999888888753 3469999999999999999999888876 6999999986543
No 142
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=92.46 E-value=0.2 Score=39.48 Aligned_cols=51 Identities=10% Similarity=0.052 Sum_probs=45.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChH------HHHHHHHHHHHhCC-CeEEEEcCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKE------RSKAIVGNFHRLGV-INSVVTCLD 130 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~------Rl~~l~~~l~r~g~-~nv~~~~~D 130 (189)
++.|.-+..++...+..+.++++|+|+. -++..+++++..|+ .++.+...|
T Consensus 52 cG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 52 CGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp CTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 8999999999988765689999999997 88999999999888 479999988
No 143
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=92.41 E-value=0.36 Score=38.22 Aligned_cols=53 Identities=8% Similarity=0.044 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~ 134 (189)
||.|.-+..++.. +.+.++++|+++.-++..++++...|. .++.+...|+...
T Consensus 73 cG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 126 (298)
T 1ri5_A 73 CGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR 126 (298)
T ss_dssp CTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS
T ss_pred CCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc
Confidence 8999888888775 345999999999999999999999887 4789999998865
No 144
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=92.17 E-value=0.44 Score=40.95 Aligned_cols=52 Identities=10% Similarity=-0.134 Sum_probs=46.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.|.-|..+|.. ...|+++|+++.-++..++|++..|+. +.+...|+.++.
T Consensus 299 cG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~ 350 (425)
T 2jjq_A 299 SGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS 350 (425)
T ss_dssp CTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC
T ss_pred ccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC
Confidence 9999999999875 358999999999999999999999998 999999998764
No 145
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=92.14 E-value=0.27 Score=40.62 Aligned_cols=53 Identities=9% Similarity=-0.044 Sum_probs=46.7
Q ss_pred cCCchHHHHHHHhcCCC----cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT----GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~----g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
||.|+-+..++..+... ..++++|+++.-++..+.|+...|+ ++.+...|+..
T Consensus 139 cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~ 195 (344)
T 2f8l_A 139 CGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLA 195 (344)
T ss_dssp CTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTS
T ss_pred CCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCC
Confidence 99999999999887533 7899999999999999999999998 68888999765
No 146
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=91.87 E-value=0.25 Score=37.86 Aligned_cols=51 Identities=18% Similarity=0.047 Sum_probs=42.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+++|.-+..++.. ..++++|+++..++..++++...+ .++.+...|...++
T Consensus 42 ~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 42 CGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELE 92 (243)
T ss_dssp CTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCC
T ss_pred CCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcC
Confidence 8888877777654 689999999999999999999887 46888888887654
No 147
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=91.71 E-value=0.31 Score=41.50 Aligned_cols=39 Identities=10% Similarity=0.052 Sum_probs=35.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
..|+++|+++.=++..++|+++.|+.+ |.+.+.|+.+++
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~ 303 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQ 303 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCC
Confidence 469999999999999999999999974 999999998765
No 148
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=91.70 E-value=0.51 Score=39.09 Aligned_cols=53 Identities=9% Similarity=-0.049 Sum_probs=44.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
||.|.-+..++.. +.+.|+|+|+++ -++..+++++..|+ .++.+...|+..++
T Consensus 73 cGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 126 (340)
T 2fyt_A 73 CGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH 126 (340)
T ss_dssp CTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred ccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc
Confidence 8888887777775 235899999997 78999999999998 57999999998754
No 149
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=91.41 E-value=0.36 Score=36.62 Aligned_cols=53 Identities=9% Similarity=0.064 Sum_probs=45.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-----eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-----NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-----nv~~~~~Da~~~~ 135 (189)
|+.|.-+..++.. ...++++|+++.-++..++++...++. ++.+...|+..++
T Consensus 39 ~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 39 CGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS 96 (235)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC
T ss_pred CCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC
Confidence 8899988888876 358999999999999999999888873 6889999988765
No 150
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=91.41 E-value=0.31 Score=37.88 Aligned_cols=52 Identities=15% Similarity=-0.082 Sum_probs=43.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||+|.-|..++.. .+.++++|+|+.-++..++++ ..+..++.+...|+..++
T Consensus 48 ~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 48 VGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP 99 (263)
T ss_dssp CTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC
T ss_pred CcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC
Confidence 8899988888875 368999999999999999888 444568999999998764
No 151
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=91.30 E-value=0.22 Score=37.34 Aligned_cols=49 Identities=12% Similarity=-0.031 Sum_probs=40.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.|.-+..++.. +.+.|+++|+++.-++..++++. ++.+...|+..++
T Consensus 60 cG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~ 108 (200)
T 1ne2_A 60 TGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS 108 (200)
T ss_dssp CTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC
T ss_pred CCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC
Confidence 8999988888875 34579999999999999999876 5778888887754
No 152
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=91.25 E-value=0.23 Score=39.90 Aligned_cols=54 Identities=11% Similarity=-0.085 Sum_probs=46.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC---CeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV---INSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~---~nv~~~~~Da~~~~~ 136 (189)
|+.|.-+..++.. ...|+++|+++.-++..++++...|+ .++.+...|+..++.
T Consensus 91 cG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 91 AGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp CTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred ccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 8999988888875 35899999999999999999998875 579999999988653
No 153
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=91.22 E-value=0.21 Score=38.87 Aligned_cols=52 Identities=4% Similarity=-0.153 Sum_probs=44.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+.+++... ...|+++|+|+.-++..++++... .++.+...|+..++
T Consensus 64 ~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~ 115 (266)
T 3ujc_A 64 SGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKE 115 (266)
T ss_dssp CTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCC
T ss_pred CCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCC
Confidence 89999999999876 369999999999999888877655 67999999998764
No 154
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=91.14 E-value=0.17 Score=39.16 Aligned_cols=54 Identities=9% Similarity=-0.031 Sum_probs=45.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..+++.. .+.++++|+++.-++..++++...|..++.+...|+..++
T Consensus 88 cG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 141 (241)
T 2ex4_A 88 AGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT 141 (241)
T ss_dssp CTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC
T ss_pred CCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC
Confidence 88898888777654 3589999999999999999998876667889999987764
No 155
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=91.06 E-value=0.44 Score=36.12 Aligned_cols=55 Identities=9% Similarity=-0.120 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-----eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-----NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-----nv~~~~~Da~~~~ 135 (189)
++.|.-+..++... +...++++|+|+.-++..++++...++. ++.+...|....+
T Consensus 38 cG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 38 CGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp CTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred CCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 88998888887653 3469999999999999999999887775 7999999986544
No 156
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=90.94 E-value=0.23 Score=40.41 Aligned_cols=53 Identities=8% Similarity=-0.030 Sum_probs=43.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--C--CCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--G--VINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g--~~nv~~~~~Da~~ 133 (189)
+|.|+.+..++... +.+.|+++|+|+.-++..++++.++ + ..++.+...|+..
T Consensus 99 ~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 155 (296)
T 1inl_A 99 GGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAE 155 (296)
T ss_dssp CTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 99999999888764 3479999999999999999998763 2 3568888888754
No 157
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=90.92 E-value=0.21 Score=42.06 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=55.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh-----C-Cc
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK-----R-DV 153 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~-----~-~~ 153 (189)
.|-||.|..|++.++++|+|+|+|.++.=++..+ |+.-.++.++..+...+ ..+|.. . |.
T Consensus 66 lG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~----rL~~~Rv~lv~~nF~~l----------~~~L~~~g~~~~vDg 131 (347)
T 3tka_A 66 FGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK----TIDDPRFSIIHGPFSAL----------GEYVAERDLIGKIDG 131 (347)
T ss_dssp CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT----TCCCTTEEEEESCGGGH----------HHHHHHTTCTTCEEE
T ss_pred cCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH----hhcCCcEEEEeCCHHHH----------HHHHHhcCCCCcccE
Confidence 8999999999999988999999999998777652 44445788888887654 334433 2 66
Q ss_pred EEEecCCCC-----CCCCcc
Q psy11559 154 KLVPTGLDF-----GTEGFV 168 (189)
Q Consensus 154 ~l~~~~~~~-----~~~g~~ 168 (189)
.+.+++++- ..+||+
T Consensus 132 ILfDLGVSS~QlD~~eRGFS 151 (347)
T 3tka_A 132 ILLDLGVSSPQLDDAERGFS 151 (347)
T ss_dssp EEEECSCCHHHHHCGGGCCC
T ss_pred EEECCccCHHHhcCCCCCCC
Confidence 777877551 356765
No 158
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=90.86 E-value=0.17 Score=40.54 Aligned_cols=51 Identities=10% Similarity=-0.038 Sum_probs=43.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCCh-------HHHHHHHHHHHHhCCCe-EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSK-------ERSKAIVGNFHRLGVIN-SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~-------~Rl~~l~~~l~r~g~~n-v~~~~~Da~~ 133 (189)
||.|.=|..+|.. .+.|+++|+++ .-++..++|++..|+.+ +.+.+.|+..
T Consensus 92 cG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 92 AGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp CTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred CccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHH
Confidence 9999988888885 36899999999 88999999998888866 9999888754
No 159
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=90.85 E-value=0.32 Score=39.37 Aligned_cols=65 Identities=8% Similarity=-0.063 Sum_probs=50.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--------------CCCcHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK--------------PEENEAVVN 145 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~--------------~eENE~vV~ 145 (189)
+|+|.=|..|++.. +.|+|+|+|+.-++.+++++. -.|+.+.++|+.+++. -.-...++.
T Consensus 55 ~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~iss~il~ 128 (271)
T 3fut_A 55 PGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPWEEVPQGSLLVANLPYHIATPLVT 128 (271)
T ss_dssp CTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCGGGSCTTEEEEEEECSSCCHHHHH
T ss_pred CchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCChhhccCccEEEecCcccccHHHHH
Confidence 88999888888862 689999999999999998876 2589999999987642 123456677
Q ss_pred HHHhh
Q psy11559 146 YALRK 150 (189)
Q Consensus 146 ~~L~~ 150 (189)
++|+.
T Consensus 129 ~ll~~ 133 (271)
T 3fut_A 129 RLLKT 133 (271)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 77765
No 160
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=90.59 E-value=0.78 Score=37.98 Aligned_cols=53 Identities=13% Similarity=0.033 Sum_probs=44.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
||.|.=+..++.. +.+.|+|+|+++ -++..+++++..|+ .++.+...|...++
T Consensus 59 cGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~ 112 (348)
T 2y1w_A 59 CGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 112 (348)
T ss_dssp CTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred CCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC
Confidence 8899888887774 346999999996 67889999999998 57999999998764
No 161
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=90.58 E-value=0.75 Score=38.15 Aligned_cols=53 Identities=9% Similarity=-0.076 Sum_probs=45.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
+|.|.=+..++.. +.+.|+|+|+++ -++..+++++..|+.+ |.+...|...++
T Consensus 75 cG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 128 (349)
T 3q7e_A 75 SGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE 128 (349)
T ss_dssp CTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred ccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc
Confidence 8999888888875 346999999994 8899999999999876 999999998764
No 162
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=90.48 E-value=0.32 Score=36.78 Aligned_cols=52 Identities=17% Similarity=0.066 Sum_probs=44.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
++.|.-+..+++.. ..++++|+++.-++..++++...+ ++.+...|+..++.
T Consensus 60 cG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~ 111 (216)
T 3ofk_A 60 CAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST 111 (216)
T ss_dssp CTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC
T ss_pred CCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC
Confidence 89999888888752 589999999999999999887654 79999999988763
No 163
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=90.47 E-value=0.45 Score=36.34 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=44.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..+++. ...++++|+++.-++..++++...|. ++.+...|...++
T Consensus 46 ~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~ 97 (246)
T 1y8c_A 46 CGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLN 97 (246)
T ss_dssp CTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCC
T ss_pred CCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCC
Confidence 7889888888765 35899999999999999999998887 6888888887654
No 164
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=90.31 E-value=0.56 Score=36.41 Aligned_cols=88 Identities=11% Similarity=0.086 Sum_probs=56.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCC-CC--------------CCCcHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQY-GK--------------PEENEAV 143 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~-~~--------------~eENE~v 143 (189)
||-|.=+..++.... ...++|+|+|+.-++..++++.+.|+. ++.+ .|.... ++ -++-+.+
T Consensus 58 CG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~LHlL~~~~~a 134 (200)
T 3fzg_A 58 CGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKMLPVLKQQDVN 134 (200)
T ss_dssp CTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETCHHHHHHTTCC
T ss_pred CCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhHHHhhhhhHHH
Confidence 788876666655443 459999999999999999999999998 6776 443321 11 2222344
Q ss_pred HHHHHhhC--CcEEEecCCC-C-C-CCCccCC
Q psy11559 144 VNYALRKR--DVKLVPTGLD-F-G-TEGFVNY 170 (189)
Q Consensus 144 V~~~L~~~--~~~l~~~~~~-~-~-~~g~~~~ 170 (189)
...+++.- +-.++..+.. . | .+|+..+
T Consensus 135 l~~v~~~L~pggvfISfptksl~Gr~~gm~~~ 166 (200)
T 3fzg_A 135 ILDFLQLFHTQNFVISFPIKSLSGKEKGMEEN 166 (200)
T ss_dssp HHHHHHTCEEEEEEEEEECCCCC--CTTCCCC
T ss_pred HHHHHHHhCCCCEEEEeChHHhcCCCcchhhh
Confidence 45566543 5555555532 2 3 5677643
No 165
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=89.75 E-value=0.71 Score=39.05 Aligned_cols=52 Identities=4% Similarity=-0.133 Sum_probs=45.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.|.-+..++.. ...|+++|+|+.-++..++|++..|+. +.+...|+..+.
T Consensus 242 cG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~ 293 (381)
T 3dmg_A 242 AGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEAL 293 (381)
T ss_dssp CTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTS
T ss_pred eeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcc
Confidence 8999999888876 359999999999999999999999976 788899987764
No 166
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=89.68 E-value=0.38 Score=35.70 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=32.7
Q ss_pred cCCchHHHHHHHhcCCC--------cEEEEEcCChHHHHHHHHHHHHhCCCeEEEE-cCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT--------GVLFANDVSKERSKAIVGNFHRLGVINSVVT-CLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~--------g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~-~~Da~ 132 (189)
||||+.|..++..++.. +.|+++|+++.+ .+.++... ..|..
T Consensus 31 cG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~ 81 (196)
T 2nyu_A 31 AAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVT 81 (196)
T ss_dssp CCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTT
T ss_pred CCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCC
Confidence 89999999999988654 899999999842 23456677 66654
No 167
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=89.68 E-value=0.72 Score=34.55 Aligned_cols=48 Identities=17% Similarity=-0.020 Sum_probs=41.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+++|.-+..++.. ...++++|+++.-++..++ .|..++.+...|+..+
T Consensus 55 ~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~ 102 (218)
T 3ou2_A 55 SGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW 102 (218)
T ss_dssp CTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC
T ss_pred CCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC
Confidence 8999988888887 3589999999998888777 6778899999999886
No 168
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=89.67 E-value=0.89 Score=39.31 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=43.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHH-------HHHHHHhC--CCeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAI-------VGNFHRLG--VINSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l-------~~~l~r~g--~~nv~~~~~Da~ 132 (189)
+|.|.=+..+|...+ .+.|+++|+++.-++.. +++++++| +.||.+..+|+.
T Consensus 251 CGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 251 SGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp CTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred CCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 999999999998764 35899999999988777 89999999 568998887654
No 169
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=89.62 E-value=0.34 Score=41.18 Aligned_cols=47 Identities=9% Similarity=0.010 Sum_probs=35.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
|||||-|.++++. .|.|+|+|+.+ |...+. ...+|.....|+..+.+
T Consensus 220 AaPGGWT~~l~~r---g~~V~aVD~~~-----l~~~l~--~~~~V~~~~~d~~~~~~ 266 (375)
T 4auk_A 220 ACPGGWTYQLVKR---NMWVYSVDNGP-----MAQSLM--DTGQVTWLREDGFKFRP 266 (375)
T ss_dssp CTTCHHHHHHHHT---TCEEEEECSSC-----CCHHHH--TTTCEEEECSCTTTCCC
T ss_pred cCCCHHHHHHHHC---CCEEEEEEhhh-----cChhhc--cCCCeEEEeCccccccC
Confidence 9999999999875 57999999764 222222 33579999999988754
No 170
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.60 E-value=0.89 Score=38.28 Aligned_cols=53 Identities=8% Similarity=-0.165 Sum_probs=46.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC---eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI---NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~---nv~~~~~Da~~ 133 (189)
||.|.-+..++... +...|+++|+|+.-++..++|++..|+. ++.+...|+..
T Consensus 231 cG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 231 CGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred CcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 99999999998874 3469999999999999999999999976 58888898876
No 171
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=89.33 E-value=0.84 Score=35.95 Aligned_cols=50 Identities=16% Similarity=-0.049 Sum_probs=41.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+++|.-+..++.+ + . .++++|+++..++..++|+++.|+. +.+...|...
T Consensus 129 cG~G~l~~~la~~-g-~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~ 178 (254)
T 2nxc_A 129 TGSGVLAIAAEKL-G-G-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEA 178 (254)
T ss_dssp CTTSHHHHHHHHT-T-C-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHH
T ss_pred CCCcHHHHHHHHh-C-C-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhh
Confidence 8888877777764 2 2 9999999999999999999999987 7777777654
No 172
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=89.27 E-value=0.36 Score=38.80 Aligned_cols=51 Identities=8% Similarity=-0.100 Sum_probs=43.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC--------C-CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG--------V-INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g--------~-~nv~~~~~Da~~ 133 (189)
||.|.=|..+|.. .+.|+++|+++.-+..+++++++.+ + .++++++.|+..
T Consensus 97 ~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 97 AGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp CTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred CcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 9999999999986 3589999999999999999998763 4 468999998754
No 173
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=89.15 E-value=0.71 Score=34.46 Aligned_cols=53 Identities=8% Similarity=-0.137 Sum_probs=40.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++... ...++++|+|+.-++..++++++.+ .++.+...|+..++
T Consensus 32 cG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~ 84 (209)
T 2p8j_A 32 AGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLP 84 (209)
T ss_dssp CCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCC
T ss_pred CCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCC
Confidence 67776655444332 3589999999999999999999887 46788888987754
No 174
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=89.14 E-value=0.16 Score=39.70 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=35.7
Q ss_pred cCCchHHHHHHHhc-CCCcEEEEEcCChHHHHHHHHHHHHh---CCC
Q psy11559 80 CAPHRAAKLAAALM-KNTGVLFANDVSKERSKAIVGNFHRL---GVI 122 (189)
Q Consensus 80 AAPGgKT~~la~~~-~~~g~v~A~D~~~~Rl~~l~~~l~r~---g~~ 122 (189)
+|.|.-+..++..+ .....|+++|+|+.-++..++++.+. |+.
T Consensus 60 cGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~ 106 (250)
T 1o9g_A 60 CGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT 106 (250)
T ss_dssp CTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH
T ss_pred CCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc
Confidence 89999888888874 22468999999999999999999877 654
No 175
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=88.99 E-value=1.4 Score=35.48 Aligned_cols=54 Identities=9% Similarity=0.060 Sum_probs=44.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh-------CCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL-------GVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~-------g~~nv~~~~~Da~~~~ 135 (189)
++.|+-+..+++. ..+.++++|+++.-++..+++.... +..++.+.+.|...++
T Consensus 43 cG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 103 (313)
T 3bgv_A 43 CGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKEL 103 (313)
T ss_dssp CTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSC
T ss_pred CCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccc
Confidence 7889988888873 3469999999999999999998876 4457899999998753
No 176
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=88.96 E-value=0.95 Score=39.50 Aligned_cols=53 Identities=13% Similarity=0.033 Sum_probs=44.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~ 135 (189)
+|.|.=+..++.. +...|+|+|+++ -++..++++++.|+ .+|.+...|...++
T Consensus 167 cGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~ 220 (480)
T 3b3j_A 167 CGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS 220 (480)
T ss_dssp CSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC
T ss_pred CcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc
Confidence 8888877777763 345899999998 88999999999998 57999999998753
No 177
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=88.64 E-value=1.3 Score=36.33 Aligned_cols=53 Identities=11% Similarity=-0.016 Sum_probs=43.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
||.|.=+..+++. +.+.|+|+|++ .-++..+++++..|+. +|.+...|+..++
T Consensus 47 cGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 100 (328)
T 1g6q_1 47 CGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH 100 (328)
T ss_dssp CTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC
T ss_pred CccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc
Confidence 8889877777764 34589999999 5789999999999986 5999999988753
No 178
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=88.55 E-value=0.34 Score=39.68 Aligned_cols=65 Identities=20% Similarity=0.107 Sum_probs=49.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh----C-CcE
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK----R-DVK 154 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~----~-~~~ 154 (189)
.|-||-|..|++. .|+|+|+|.++.=++..++ ++. .++.++..|...+ ..+|++ . |..
T Consensus 31 ~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l----------~~~L~~~g~~~vDgI 93 (285)
T 1wg8_A 31 LGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHL----------KRHLAALGVERVDGI 93 (285)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGH----------HHHHHHTTCSCEEEE
T ss_pred CCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchH----------HHHHHHcCCCCcCEE
Confidence 7999999999997 5899999999999888777 644 5799999998654 334443 2 556
Q ss_pred EEecCCC
Q psy11559 155 LVPTGLD 161 (189)
Q Consensus 155 l~~~~~~ 161 (189)
+.+++++
T Consensus 94 L~DLGvS 100 (285)
T 1wg8_A 94 LADLGVS 100 (285)
T ss_dssp EEECSCC
T ss_pred EeCCccc
Confidence 6666543
No 179
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=88.50 E-value=0.044 Score=45.17 Aligned_cols=50 Identities=10% Similarity=-0.054 Sum_probs=35.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcC----ChHHHHHHHHHHHHhCCCeEEEEcC-CCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDV----SKERSKAIVGNFHRLGVINSVVTCL-DGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~----~~~Rl~~l~~~l~r~g~~nv~~~~~-Da~~~~ 135 (189)
|||||.|..+|+. |.|+++|+ ++.++..+ ..+++|..+|.+... |.+.++
T Consensus 91 cG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~ 145 (305)
T 2p41_A 91 CGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP 145 (305)
T ss_dssp CTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC
T ss_pred CCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC
Confidence 9999999999875 68999999 55444211 123345567888888 888764
No 180
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=88.47 E-value=0.83 Score=35.29 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=41.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.|.-|..++.... .+.++++|+++.-++..+++ ..++.+...|+..++
T Consensus 42 ~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 42 CGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK 91 (259)
T ss_dssp CTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC
T ss_pred CcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC
Confidence 899999999988763 46899999999999888877 356888889988765
No 181
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=88.40 E-value=0.98 Score=37.88 Aligned_cols=53 Identities=8% Similarity=-0.065 Sum_probs=45.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
||.|.=+..+++. +...|+|+|++ .-++..+++++..|+.+ |.+...|+..+.
T Consensus 72 cGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 125 (376)
T 3r0q_C 72 TGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS 125 (376)
T ss_dssp CTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC
T ss_pred cCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC
Confidence 8899888888875 23489999999 88999999999999875 999999998764
No 182
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=88.32 E-value=0.66 Score=34.61 Aligned_cols=52 Identities=13% Similarity=-0.013 Sum_probs=42.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++..- ...++++|+++..++..++++.. ..++.+...|+..++
T Consensus 51 cG~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 51 CGNSALSYELFLGG--FPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLD 102 (215)
T ss_dssp CTTCSHHHHHHHTT--CCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCC
T ss_pred CCCcHHHHHHHHcC--CCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCC
Confidence 88898888888752 22899999999999999998764 357888899988764
No 183
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=88.28 E-value=0.37 Score=38.27 Aligned_cols=50 Identities=12% Similarity=0.086 Sum_probs=39.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.=|..+++. +.+.|+|+|+|+.-++.++++ +..|+.+.++|+.+++
T Consensus 40 ~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 40 GGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKFP 89 (249)
T ss_dssp SCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTCC
T ss_pred CchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhCC
Confidence 6777777777654 246999999999999999887 3467999999998865
No 184
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=87.97 E-value=0.49 Score=38.56 Aligned_cols=54 Identities=9% Similarity=0.032 Sum_probs=44.3
Q ss_pred cCCchHHHHHHHhcC----CCcEEEEEcCCh--------------------------HHHHHHHHHHHHhCC--CeEEEE
Q psy11559 80 CAPHRAAKLAAALMK----NTGVLFANDVSK--------------------------ERSKAIVGNFHRLGV--INSVVT 127 (189)
Q Consensus 80 AAPGgKT~~la~~~~----~~g~v~A~D~~~--------------------------~Rl~~l~~~l~r~g~--~nv~~~ 127 (189)
.+-|+-+.+||+.+. ..++|+++|..+ .+++..++++++.|+ .+|.++
T Consensus 115 v~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~~~~I~li 194 (282)
T 2wk1_A 115 VWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLLDEQVRFL 194 (282)
T ss_dssp CTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCCSTTEEEE
T ss_pred cCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCCcCceEEE
Confidence 888999999998774 367899999642 157889999999998 679999
Q ss_pred cCCCCC
Q psy11559 128 CLDGRQ 133 (189)
Q Consensus 128 ~~Da~~ 133 (189)
.+|+.+
T Consensus 195 ~Gda~e 200 (282)
T 2wk1_A 195 PGWFKD 200 (282)
T ss_dssp ESCHHH
T ss_pred EeCHHH
Confidence 998854
No 185
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=87.87 E-value=0.87 Score=36.56 Aligned_cols=41 Identities=10% Similarity=0.026 Sum_probs=32.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV 121 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~ 121 (189)
++.|.-|..|+..+.. ..|+++|+++.-++..+++++..+.
T Consensus 55 CG~G~~~~~la~~~~~-~~v~gvDis~~~i~~A~~~~~~~~~ 95 (292)
T 3g07_A 55 CNVGHLTLSIACKWGP-SRMVGLDIDSRLIHSARQNIRHYLS 95 (292)
T ss_dssp CTTCHHHHHHHHHTCC-SEEEEEESCHHHHHHHHHTC-----
T ss_pred CCCCHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhhh
Confidence 8999999999988753 5999999999999999999887663
No 186
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=87.86 E-value=0.48 Score=38.11 Aligned_cols=51 Identities=8% Similarity=0.086 Sum_probs=41.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CC---------CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GV---------INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~---------~nv~~~~~Da~~ 133 (189)
+|.|+-+..++.. +.+.|+++|+++.-++..++++ ++ ++ .++.+...|+..
T Consensus 84 ~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~ 145 (281)
T 1mjf_A 84 GGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE 145 (281)
T ss_dssp CTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH
T ss_pred CCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH
Confidence 8889888888876 4579999999999999999998 55 43 468888888754
No 187
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=87.53 E-value=0.68 Score=34.92 Aligned_cols=49 Identities=8% Similarity=-0.038 Sum_probs=40.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++.. ...++++|+++.-++..++++. .++.+...|+..++
T Consensus 54 cG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~ 102 (220)
T 3hnr_A 54 VGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFE 102 (220)
T ss_dssp CTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCC
T ss_pred CCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcC
Confidence 8999988888875 4689999999998888887755 56788889988765
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=87.46 E-value=0.98 Score=34.55 Aligned_cols=45 Identities=22% Similarity=0.132 Sum_probs=38.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
+++|.-+.+++.. ...|+++|+++.-++..+++ ..++.+...|+.
T Consensus 57 cG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~ 101 (226)
T 3m33_A 57 CGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGK 101 (226)
T ss_dssp CTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSC
T ss_pred CCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchh
Confidence 8999988888876 36999999999999988887 456888888884
No 189
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=86.91 E-value=0.66 Score=35.54 Aligned_cols=54 Identities=9% Similarity=-0.017 Sum_probs=44.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~ 136 (189)
+|.|.-+..++. ....|+++|+++.-++..++++...+. .++.+...|+..++.
T Consensus 75 cG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 129 (235)
T 3lcc_A 75 CGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP 129 (235)
T ss_dssp CTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC
T ss_pred CCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC
Confidence 888887777754 346899999999999999999887653 579999999988653
No 190
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=86.89 E-value=1.7 Score=35.05 Aligned_cols=53 Identities=11% Similarity=-0.051 Sum_probs=46.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~ 134 (189)
++.|.-+..+++... ...++++|++ .-++..++++.+.|+. ++.+...|..+.
T Consensus 174 ~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 227 (335)
T 2r3s_A 174 ASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV 227 (335)
T ss_dssp CTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS
T ss_pred CCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC
Confidence 888998888888763 4699999999 9999999999999986 599999998764
No 191
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=86.87 E-value=0.48 Score=37.77 Aligned_cols=51 Identities=4% Similarity=-0.065 Sum_probs=39.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|+|.=|. ++ . ..++.|+|+|+|+.-++.+++++... .|+.+..+|+.+++
T Consensus 30 ~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 30 PGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFN 80 (252)
T ss_dssp CTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCC
T ss_pred CCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCC
Confidence 77887777 54 3 22334999999999999999887653 58999999998864
No 192
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=86.83 E-value=0.82 Score=35.20 Aligned_cols=52 Identities=6% Similarity=-0.155 Sum_probs=43.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..+++.. ...++++|+++.-++..++++... .++.+...|...++
T Consensus 102 ~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 102 AGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETAT 153 (254)
T ss_dssp CTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCC
T ss_pred CCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCC
Confidence 89999888888765 357999999999999999887654 57889999987764
No 193
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=86.67 E-value=1.4 Score=41.53 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=47.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh------CCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL------GVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~------g~~nv~~~~~Da~~~~~ 136 (189)
+|.|.=+..|+....+.+.|+++|+++.-++..+++++.. |+.++.+...|+..++.
T Consensus 730 CGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~ 792 (950)
T 3htx_A 730 CGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS 792 (950)
T ss_dssp CSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT
T ss_pred CCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc
Confidence 8999888888766433469999999999999999987754 67789999999988654
No 194
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=86.37 E-value=1.1 Score=35.10 Aligned_cols=50 Identities=18% Similarity=0.141 Sum_probs=39.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|+|.-+..++..+. .+.++++|+++..++..+++. .++.+...|+..++
T Consensus 94 ~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~ 143 (269)
T 1p91_A 94 CGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLP 143 (269)
T ss_dssp CTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCS
T ss_pred CCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCC
Confidence 899998999998763 469999999999998887753 45677788877654
No 195
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=86.12 E-value=0.79 Score=34.69 Aligned_cols=53 Identities=8% Similarity=0.023 Sum_probs=41.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHH------------hCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHR------------LGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r------------~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.=+..||+. ...|+++|+|+.=++..+++.+. .+..++.+.+.|+..++
T Consensus 31 CG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 31 CGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp TCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred CCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 8899888888875 24899999999999888876542 12357889999998865
No 196
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=85.55 E-value=1.1 Score=35.35 Aligned_cols=48 Identities=13% Similarity=0.203 Sum_probs=39.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-|..+++ ..+.|+++|+|+.-++..++++ .++.+...|+..++
T Consensus 66 cG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~ 113 (279)
T 3ccf_A 66 CGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFR 113 (279)
T ss_dssp CTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCC
T ss_pred CCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCC
Confidence 899999988888 3579999999999998887764 46777888887764
No 197
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=85.43 E-value=0.078 Score=41.74 Aligned_cols=52 Identities=6% Similarity=-0.091 Sum_probs=44.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~ 136 (189)
+|+|+-|..+++.. +.|+++|+++.-++.++++++ +..++.+...|+.+++.
T Consensus 38 ~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 38 TGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQF 89 (245)
T ss_dssp CCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTC
T ss_pred CCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCc
Confidence 89999999999862 789999999998888887776 45689999999998763
No 198
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=85.19 E-value=0.4 Score=39.20 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=30.6
Q ss_pred CCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEE-EcCCCCCCC
Q psy11559 81 APHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVV-TCLDGRQYG 135 (189)
Q Consensus 81 APGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~-~~~Da~~~~ 135 (189)
|||+ ..++.+++..|.|+++|+++. +.++.+ +..|.+.++
T Consensus 79 GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 79 APGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVH 119 (290)
T ss_dssp CHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCC
T ss_pred CcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCC
Confidence 8898 666777776789999999998 245667 788877643
No 199
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=85.15 E-value=1.1 Score=36.51 Aligned_cols=54 Identities=7% Similarity=-0.052 Sum_probs=43.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC-----CCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG-----VINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g-----~~nv~~~~~Da~~~ 134 (189)
+|.|+-+..++.. .+...|+++|+|+.=++..++++..++ -.++.+...|+..+
T Consensus 92 ~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~ 150 (294)
T 3adn_A 92 GGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF 150 (294)
T ss_dssp CTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC-
T ss_pred CChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH
Confidence 8888877777764 334689999999999999999998763 34789999999875
No 200
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=85.14 E-value=2.8 Score=34.44 Aligned_cols=54 Identities=7% Similarity=-0.140 Sum_probs=46.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~ 135 (189)
++.|.-+..++.... ...++++|+ +.-++..++++++.|+.+ +.+...|....+
T Consensus 199 ~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 253 (359)
T 1x19_A 199 GGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKES 253 (359)
T ss_dssp CTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSC
T ss_pred CcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCC
Confidence 899999999988753 568999999 999999999999999875 999999997653
No 201
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=84.74 E-value=0.77 Score=35.36 Aligned_cols=52 Identities=6% Similarity=-0.200 Sum_probs=42.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.|.-|..++.. ....|+++|+|+.-++..+++.++.| .++.+...|+..+
T Consensus 69 cGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 69 FGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDV 120 (236)
T ss_dssp CTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHH
T ss_pred ccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHh
Confidence 8899888888653 22489999999999999999988877 5788888887654
No 202
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=84.30 E-value=1.5 Score=33.77 Aligned_cols=51 Identities=10% Similarity=-0.084 Sum_probs=41.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++..- ...++++|+++.-++..++++. ..++.+...|+..++
T Consensus 53 cG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~ 103 (253)
T 3g5l_A 53 CGFGWHCIYAAEHG--AKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIA 103 (253)
T ss_dssp CTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCC
T ss_pred CCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCC
Confidence 89998888888762 2389999999999888887765 457889999987765
No 203
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=83.83 E-value=1.9 Score=31.26 Aligned_cols=47 Identities=11% Similarity=0.020 Sum_probs=37.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
++.|.-+..++.. ...++++|+++..++..++++. ++.+...|...+
T Consensus 55 ~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~-----~~~~~~~d~~~~ 101 (195)
T 3cgg_A 55 CGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP-----EARWVVGDLSVD 101 (195)
T ss_dssp CTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTS
T ss_pred CCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC-----CCcEEEcccccC
Confidence 8899988888875 3589999999999998888753 466777777654
No 204
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=83.76 E-value=1.5 Score=32.58 Aligned_cols=48 Identities=6% Similarity=-0.145 Sum_probs=38.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..++.. ...++++|+++.-++..+++ ..++.+...|+..++
T Consensus 50 cG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~ 97 (203)
T 3h2b_A 50 SGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLS 97 (203)
T ss_dssp CTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGG
T ss_pred CCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccc
Confidence 8999988888876 34899999999988888776 346788888887654
No 205
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=83.72 E-value=2.1 Score=39.16 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=36.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYGK 136 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~ 136 (189)
..|+++|+++.=++..+.|+++.|+.+ |.+...|+..+..
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~ 297 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTN 297 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCC
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcc
Confidence 589999999999999999999999986 9999999987643
No 206
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=83.60 E-value=3.4 Score=33.89 Aligned_cols=52 Identities=10% Similarity=-0.135 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|.-+..+++... ...++++|+ +.-++..++++.+.|+. +|.+...|...
T Consensus 191 ~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 191 GGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK 243 (374)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 889988888888763 568999999 99999999999999986 79999999865
No 207
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=83.16 E-value=1.1 Score=37.21 Aligned_cols=53 Identities=11% Similarity=-0.012 Sum_probs=42.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CC--CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GV--INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~--~nv~~~~~Da~~ 133 (189)
+|.|+-+..++... +.+.|+++|+|+.-++..++++.++ |+ .++.+...|+..
T Consensus 129 ~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~ 185 (334)
T 1xj5_A 129 GGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVA 185 (334)
T ss_dssp CSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHH
T ss_pred CCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHH
Confidence 88888777777642 3469999999999999999999875 44 468999998754
No 208
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=82.91 E-value=2.4 Score=32.45 Aligned_cols=48 Identities=21% Similarity=0.221 Sum_probs=39.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|+.|.-+..++.... .|+++|+|+.-++..++++ ...++.+...|...
T Consensus 65 cG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~ 112 (245)
T 3ggd_A 65 CGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLV 112 (245)
T ss_dssp CTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTC
T ss_pred CCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhC---cccCceEEECcccc
Confidence 899999989988643 7999999999888888765 44578899999876
No 209
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=82.59 E-value=1.4 Score=33.61 Aligned_cols=51 Identities=10% Similarity=-0.015 Sum_probs=40.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. +.+.++++|+++.-++..++++.. .++.+...|...++
T Consensus 52 ~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~ 102 (243)
T 3bkw_A 52 CGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH 102 (243)
T ss_dssp CTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC
T ss_pred CcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc
Confidence 8899988888875 234899999999988888776543 36888888887654
No 210
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=81.88 E-value=2 Score=32.72 Aligned_cols=50 Identities=8% Similarity=-0.185 Sum_probs=40.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. ...++++|+++.-++..+++. ...++.+...|+..++
T Consensus 62 ~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 62 CGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLP 111 (242)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCS
T ss_pred CCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCC
Confidence 8899988888876 358999999999888887764 3457889999988764
No 211
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=81.75 E-value=0.89 Score=32.41 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=34.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+++|+-+..++..++..+.++++|+++ -+. +.++.+...|....
T Consensus 31 ~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~ 74 (180)
T 1ej0_A 31 AAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDE 74 (180)
T ss_dssp CTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSH
T ss_pred CCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccc
Confidence 899999999999876567999999998 432 25677788887653
No 212
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=81.55 E-value=2.9 Score=33.31 Aligned_cols=49 Identities=12% Similarity=0.040 Sum_probs=33.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcC-ChHHHHHHHHHH-----HHhCCC-----eEEEEcCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDV-SKERSKAIVGNF-----HRLGVI-----NSVVTCLD 130 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~-~~~Rl~~l~~~l-----~r~g~~-----nv~~~~~D 130 (189)
+|.|.=+..++.. + .+.|+++|+ ++.-++.+++|+ +..|+. ++.+...|
T Consensus 88 ~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 88 AGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp CTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECC
T ss_pred ccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEec
Confidence 8888877766653 2 358999999 899999999999 677764 67776444
No 213
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=81.31 E-value=1.8 Score=32.32 Aligned_cols=47 Identities=21% Similarity=0.077 Sum_probs=36.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||.|.-+..++.. ...++++|+++.-++..++++ + +.+...|...++
T Consensus 52 cG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~---~~~~~~d~~~~~ 98 (211)
T 3e23_A 52 CGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL---G---RPVRTMLFHQLD 98 (211)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH---T---SCCEECCGGGCC
T ss_pred CCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc---C---CceEEeeeccCC
Confidence 8999988888875 358999999999999888876 3 344556665554
No 214
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=81.21 E-value=3.2 Score=34.03 Aligned_cols=53 Identities=19% Similarity=-0.007 Sum_probs=44.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.|.-+..++... +.+.|+++|+|+.-++..+++++..|+. +.+...|...+
T Consensus 205 cG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~ 257 (343)
T 2pjd_A 205 CGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSE 257 (343)
T ss_dssp CTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTT
T ss_pred CccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEcccccc
Confidence 89999888888764 3469999999999999999999998876 56678887654
No 215
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=80.85 E-value=1.7 Score=35.32 Aligned_cols=55 Identities=7% Similarity=-0.191 Sum_probs=43.4
Q ss_pred cCC--chHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAP--HRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAP--GgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
|+. +|-+.++++...+..+|+++|.|+.=+..-++++...+..++.++..|.+.+
T Consensus 87 cG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 87 TGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp CCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred CCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 554 5678888888777789999999999888888777654445799999998763
No 216
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=80.66 E-value=1.3 Score=35.61 Aligned_cols=53 Identities=8% Similarity=-0.048 Sum_probs=41.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC----CCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG----VINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g----~~nv~~~~~Da~~ 133 (189)
+|.|+-+..++.. .+...|+++|+++.-++..++++..++ -.++.+...|+..
T Consensus 87 ~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (283)
T 2i7c_A 87 GGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 143 (283)
T ss_dssp CTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHH
Confidence 8888877777754 334699999999999999999887653 3578888888765
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=79.75 E-value=3.2 Score=31.40 Aligned_cols=48 Identities=10% Similarity=0.092 Sum_probs=38.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++... ..++++|+++.-++..++++ .++.+...|+..++
T Consensus 49 ~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~ 96 (239)
T 3bxo_A 49 CGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFR 96 (239)
T ss_dssp CTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCC
T ss_pred ccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcc
Confidence 88999888888764 38999999999998888764 45778888887654
No 218
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=79.29 E-value=5 Score=31.88 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=47.8
Q ss_pred cCCc-hHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 80 CAPH-RAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 80 AAPG-gKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|+.| |+.+... +......|+.+|.++.+++.+.+.++..|. ++..+..|.++ +++-+..|+.+.+++
T Consensus 15 as~GIG~aiA~~-la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~---~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 15 AGSGIGRAIAKK-FALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSK---KKDVEEFVRRTFETY 82 (254)
T ss_dssp TTSHHHHHHHHH-HHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS---HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHH-HHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCC---HHHHHHHHHHHHHHc
Confidence 5555 5554322 122346899999999999999999999885 47788889765 456666777777765
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=79.14 E-value=1.2 Score=36.52 Aligned_cols=53 Identities=8% Similarity=-0.009 Sum_probs=42.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CC--CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GV--INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~--~nv~~~~~Da~~ 133 (189)
+|.|+-+..++... +.+.|+++|+++.-++..++++.++ |+ .++.+...|+..
T Consensus 117 ~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~ 173 (314)
T 2b2c_A 117 GGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFE 173 (314)
T ss_dssp CTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHH
T ss_pred CCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHH
Confidence 78888777777643 3579999999999999999998765 43 468899988864
No 220
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=79.12 E-value=1.4 Score=36.27 Aligned_cols=53 Identities=8% Similarity=-0.038 Sum_probs=41.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--C--CCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--G--VINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g--~~nv~~~~~Da~~ 133 (189)
+|.|+-+..++... +...|+++|+|+.-++..++++..+ + -.++.+...|+..
T Consensus 125 ~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~ 181 (321)
T 2pt6_A 125 GGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASK 181 (321)
T ss_dssp CTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHH
T ss_pred CCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHH
Confidence 88888888777643 3469999999999999999998763 2 2468888888754
No 221
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=78.76 E-value=2.2 Score=34.78 Aligned_cols=53 Identities=6% Similarity=0.020 Sum_probs=42.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CC--CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GV--INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~--~nv~~~~~Da~~ 133 (189)
++.|+-+..++.. .+.+.|+++|+++.-++..++++..+ |+ .++.+...|+..
T Consensus 104 ~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~ 160 (304)
T 2o07_A 104 GGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFE 160 (304)
T ss_dssp CTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 8888877777764 23479999999999999999998873 33 468999999854
No 222
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=78.59 E-value=6 Score=32.24 Aligned_cols=52 Identities=10% Similarity=-0.149 Sum_probs=45.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|.-+..++.... ...++++|+ +.-++..++++++.|+. ++.+...|...
T Consensus 192 ~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 244 (360)
T 1tw3_A 192 GGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE 244 (360)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 899998988988753 468999999 89999999999999986 79999999865
No 223
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=78.55 E-value=6.9 Score=33.83 Aligned_cols=54 Identities=9% Similarity=-0.084 Sum_probs=41.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHH-------HHHhCC--CeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGN-------FHRLGV--INSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~-------l~r~g~--~nv~~~~~Da~~~ 134 (189)
+|.|.=+.++|...+ .+.++++|+++.-++..+++ ++.+|+ .+|.+.++|+..+
T Consensus 182 CGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 182 SGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp CTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred CCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 889988888887653 34799999998766666554 456676 5899999998764
No 224
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=77.38 E-value=2.2 Score=33.11 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=38.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. ...++++|+++.-++..++++. ++.+...|+..++
T Consensus 59 cG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~ 106 (263)
T 3pfg_A 59 CGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFS 106 (263)
T ss_dssp CTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCC
T ss_pred CcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCC
Confidence 8899888777764 3589999999999988887643 6788888887765
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=76.87 E-value=2.7 Score=34.26 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=42.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--C---CCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--G---VINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g---~~nv~~~~~Da~~ 133 (189)
+|.|+=+..++... +.+.|+++|+++.-++..++++..+ | -.++.+...|+..
T Consensus 86 ~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~ 143 (314)
T 1uir_A 86 GGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARA 143 (314)
T ss_dssp CTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHH
T ss_pred CCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHH
Confidence 88888777777643 3468999999999999999998763 2 3579999999865
No 226
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=76.78 E-value=6.8 Score=33.20 Aligned_cols=50 Identities=4% Similarity=-0.061 Sum_probs=40.2
Q ss_pred cCCchHHHHHH-HhcCCCcEEEEEcCChHHHHHHHHHHHHh---CC-CeEEEEcC
Q psy11559 80 CAPHRAAKLAA-ALMKNTGVLFANDVSKERSKAIVGNFHRL---GV-INSVVTCL 129 (189)
Q Consensus 80 AAPGgKT~~la-~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~---g~-~nv~~~~~ 129 (189)
|.-|.-|..++ ...++.++|+|+|.++.=.+.|++|++.+ +. .||++.+.
T Consensus 235 An~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 235 ASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred CCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 88888888877 44444589999999999999999999984 46 67777654
No 227
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=76.76 E-value=1.5 Score=36.36 Aligned_cols=54 Identities=11% Similarity=-0.013 Sum_probs=42.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|-|+-+..++.... ...|+++|+++.=++..++++...+-.++.+...|++.+
T Consensus 98 ~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~ 151 (317)
T 3gjy_A 98 GGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV 151 (317)
T ss_dssp CGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH
T ss_pred CCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH
Confidence 777777778887654 458999999999999988887544345799999998653
No 228
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=75.88 E-value=4.3 Score=34.00 Aligned_cols=51 Identities=6% Similarity=-0.165 Sum_probs=40.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
.|+|.=|..|++.... .+|+|+|+++.=+..|++.+ ...|++++..|+.++
T Consensus 67 PG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~---~~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 67 PGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF---EGSPLQILKRDPYDW 117 (353)
T ss_dssp CTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT---TTSSCEEECSCTTCH
T ss_pred CCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc---cCCCEEEEECCccch
Confidence 7888999999986432 48999999998777787766 246899999999665
No 229
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=75.51 E-value=4.3 Score=32.35 Aligned_cols=53 Identities=8% Similarity=-0.114 Sum_probs=41.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--CC--CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--GV--INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g~--~nv~~~~~Da~~ 133 (189)
+|.|+-+..++.. .+...|+++|+++.=++..++++..+ ++ .++.+...|+..
T Consensus 84 ~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~ 140 (275)
T 1iy9_A 84 GGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFM 140 (275)
T ss_dssp CTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHH
T ss_pred CchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHH
Confidence 7777766666654 23469999999999999999998764 33 479999999865
No 230
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=75.17 E-value=3.3 Score=29.64 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=35.9
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLD 130 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~D 130 (189)
+++|.-+..++... +.++++|+++.-++..+++ ..++.+...|
T Consensus 26 ~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d 68 (170)
T 3i9f_A 26 CGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP 68 (170)
T ss_dssp CTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG
T ss_pred CCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC
Confidence 88999888888764 4899999999999888887 4578888888
No 231
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=74.79 E-value=9 Score=30.64 Aligned_cols=86 Identities=12% Similarity=0.026 Sum_probs=52.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC----------------CCCcHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK----------------PEENEAV 143 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~----------------~eENE~v 143 (189)
||-|--+. +.. +...++|+|+|+.-++.+++++.+.|. +..+...|...-+. ..+-...
T Consensus 114 CG~gpLal--~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~-~~~~~v~D~~~~~~~~~~DvvLllk~lh~LE~q~~~~ 188 (253)
T 3frh_A 114 CGLNPLAL--YER--GIASVWGCDIHQGLGDVITPFAREKDW-DFTFALQDVLCAPPAEAGDLALIFKLLPLLEREQAGS 188 (253)
T ss_dssp CTTTHHHH--HHT--TCSEEEEEESBHHHHHHHHHHHHHTTC-EEEEEECCTTTSCCCCBCSEEEEESCHHHHHHHSTTH
T ss_pred CCccHHHH--Hhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeecccCCCCCCcchHHHHHHHHHhhhhchhh
Confidence 55554333 322 578999999999999999999999994 57788888765443 1222234
Q ss_pred HHHHHhhC--CcEEEecCCC-C-C-CCCccCC
Q psy11559 144 VNYALRKR--DVKLVPTGLD-F-G-TEGFVNY 170 (189)
Q Consensus 144 V~~~L~~~--~~~l~~~~~~-~-~-~~g~~~~ 170 (189)
...+++.- +..++..+.. . | .+|+..+
T Consensus 189 ~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~ 220 (253)
T 3frh_A 189 AMALLQSLNTPRMAVSFPTRSLGGRGKGMEAN 220 (253)
T ss_dssp HHHHHHHCBCSEEEEEEECC-----------C
T ss_pred HHHHHHHhcCCCEEEEcChHHhcCCCcchhhH
Confidence 44666654 6666666533 2 3 5687653
No 232
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=74.27 E-value=3.2 Score=33.56 Aligned_cols=52 Identities=12% Similarity=-0.135 Sum_probs=44.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
++.|.-+..+++... ...+++.|+ +.-++..++++.+.|+. +|.+...|...
T Consensus 176 ~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 228 (334)
T 2ip2_A 176 GGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ 228 (334)
T ss_dssp CTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT
T ss_pred CCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC
Confidence 889999999988764 468999999 99999999999888864 69999999865
No 233
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=74.24 E-value=4.1 Score=32.92 Aligned_cols=53 Identities=11% Similarity=-0.015 Sum_probs=41.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh----CCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL----GVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~----g~~nv~~~~~Da~~ 133 (189)
+|.|+-+..++.. .+.+.|+++|+++.-++..++++..+ .-.++.+...|+..
T Consensus 104 ~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~ 160 (304)
T 3bwc_A 104 GGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLA 160 (304)
T ss_dssp CTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHH
T ss_pred CCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHH
Confidence 8888888777764 23469999999999999999988543 23468888888755
No 234
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=73.74 E-value=4.1 Score=30.27 Aligned_cols=46 Identities=4% Similarity=-0.236 Sum_probs=34.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..+ +...++++|+++.-++..++++ .++.+...|+..++
T Consensus 45 ~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~ 90 (211)
T 2gs9_A 45 AGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALP 90 (211)
T ss_dssp CTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCC
T ss_pred CCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCC
Confidence 7788766555 2238999999999988888775 56778888887754
No 235
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=72.78 E-value=11 Score=30.37 Aligned_cols=51 Identities=10% Similarity=-0.129 Sum_probs=44.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~ 132 (189)
++.|.-+..+++... ...+++.|+ +.-++..++++.+.|+ .+|.+...|..
T Consensus 178 ~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 229 (332)
T 3i53_A 178 GGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF 229 (332)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC
Confidence 889988888888764 468999999 9999999999999997 46999999985
No 236
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=72.55 E-value=3.1 Score=33.40 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=37.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.++..|..++..+..|.++ ++.=++.++.+.+++
T Consensus 66 ~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 66 ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD---PGSCADAARTVVDAF 117 (293)
T ss_dssp CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC---HHHHHHHHHHHHHHc
Confidence 4899999999999998888887775678888889764 233344455555543
No 237
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=72.34 E-value=5.8 Score=32.25 Aligned_cols=88 Identities=14% Similarity=0.066 Sum_probs=54.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC----------------CCCcHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK----------------PEENEAV 143 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~----------------~eENE~v 143 (189)
||.|-=+..++.. .+...++|+|+++.-++.+++|+.++|+. ..+...|-..-.+ ..+-...
T Consensus 141 CG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~p~~~~DvaL~lkti~~Le~q~kg~ 218 (281)
T 3lcv_B 141 CGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDRLDEPADVTLLLKTLPCLETQQRGS 218 (281)
T ss_dssp CTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSCCCSCCSEEEETTCHHHHHHHSTTH
T ss_pred cCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccCCCCCcchHHHHHHHHHhhhhhhHH
Confidence 5666544444332 24679999999999999999999999987 6677777654332 1111222
Q ss_pred HHHHHhhC--CcEEEecCCC-C-C-CCCccC
Q psy11559 144 VNYALRKR--DVKLVPTGLD-F-G-TEGFVN 169 (189)
Q Consensus 144 V~~~L~~~--~~~l~~~~~~-~-~-~~g~~~ 169 (189)
.-.+++.- +..++..+.. . | .+|+..
T Consensus 219 g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~~ 249 (281)
T 3lcv_B 219 GWEVIDIVNSPNIVVTFPTKSLGQRSKGMFQ 249 (281)
T ss_dssp HHHHHHHSSCSEEEEEEECC-------CHHH
T ss_pred HHHHHHHhCCCCEEEeccchhhcCCCcchhh
Confidence 23556543 6677776653 2 3 667754
No 238
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=72.00 E-value=5.6 Score=31.20 Aligned_cols=51 Identities=10% Similarity=-0.079 Sum_probs=39.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC----CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV----INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~----~nv~~~~~Da~~ 133 (189)
+|.|.-+..++.. ...|+++|+|+.-++..++++...+. .++.+...|+..
T Consensus 66 cG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 66 CGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred CCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 8999999888875 24899999999999999988755442 346666666654
No 239
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=71.73 E-value=1.8 Score=33.73 Aligned_cols=47 Identities=9% Similarity=-0.135 Sum_probs=36.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.-+..+++ ..+.|+++|+|+.-++..+++. |+.+...|+..++
T Consensus 43 cG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~ 89 (261)
T 3ege_A 43 AGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLA 89 (261)
T ss_dssp CTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCC
T ss_pred CcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCC
Confidence 889998888886 3479999999996665444432 7899999998765
No 240
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=71.59 E-value=3.2 Score=35.50 Aligned_cols=55 Identities=20% Similarity=0.139 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHhcC------------CCcEEEEEcCChHHHHHHHHHHHHhCCC--eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMK------------NTGVLFANDVSKERSKAIVGNFHRLGVI--NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~------------~~g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~~~~Da~~~ 134 (189)
||.||-+..++..+. ....+++.|+++.-++..+.|+...|+. ++.+.+.|+...
T Consensus 180 cGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 180 CGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 999999888887652 1257999999999999999999988885 677888888664
No 241
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=71.38 E-value=5.4 Score=31.35 Aligned_cols=53 Identities=9% Similarity=0.024 Sum_probs=39.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHH-----------------hCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHR-----------------LGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r-----------------~g~~nv~~~~~Da~~~~ 135 (189)
+|.|.=+..||+. ...|+++|+|+.=++..+++... -...+|.+.++|+..++
T Consensus 77 CG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 77 CGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 8899888888874 23899999999988877654421 01247899999998754
No 242
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=71.01 E-value=14 Score=31.15 Aligned_cols=54 Identities=9% Similarity=-0.099 Sum_probs=41.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYGK 136 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~ 136 (189)
||.|-=+..+|. .+ ..+|+|+|.|+ =+...+++++.-|+.+ |.++..|.+.+..
T Consensus 92 ~GtGiLs~~Aa~-aG-A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 92 AGTGILSIFCAQ-AG-ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp CTTSHHHHHHHH-TT-CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred CCccHHHHHHHH-hC-CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC
Confidence 788876554444 33 24899999996 4778888899999864 9999999988653
No 243
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=70.82 E-value=11 Score=29.92 Aligned_cols=51 Identities=12% Similarity=-0.010 Sum_probs=37.5
Q ss_pred cCC---chHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAP---HRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAP---GgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
++. |. ++.++....+.++|+++|+|+.=++..++++.. ..++.++..|.+.
T Consensus 86 cG~pt~G~-~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~ 139 (274)
T 2qe6_A 86 SGLPTVQN-THEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRD 139 (274)
T ss_dssp CCSCCSSC-HHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTC
T ss_pred CCCCCCCh-HHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCC
Confidence 676 64 455555555568999999999988888887743 3468888999854
No 244
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=70.81 E-value=2.9 Score=32.30 Aligned_cols=50 Identities=6% Similarity=-0.215 Sum_probs=39.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
+|.|.-+.+|++.. ...++++|+|+.-++..+++.++.+. ++.+...|+.
T Consensus 69 ~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~-~~~~~~~~a~ 118 (236)
T 3orh_A 69 FGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-KVIPLKGLWE 118 (236)
T ss_dssp CTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-EEEEEESCHH
T ss_pred CCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC-ceEEEeehHH
Confidence 88888888887642 24799999999999999999888774 5777777764
No 245
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=67.62 E-value=17 Score=29.42 Aligned_cols=54 Identities=6% Similarity=-0.249 Sum_probs=45.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.... ...++++|+ +.-++..++++.+.|+. +|.+...|....+
T Consensus 188 ~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 242 (352)
T 3mcz_A 188 GGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR 242 (352)
T ss_dssp CTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG
T ss_pred CCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc
Confidence 888888888888754 478999999 88899999999999986 5999999987753
No 246
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=66.24 E-value=1.6 Score=34.84 Aligned_cols=50 Identities=14% Similarity=-0.049 Sum_probs=32.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHH---HHHhCCCeEEEE--cCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGN---FHRLGVINSVVT--CLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~---l~r~g~~nv~~~--~~Da~~~~ 135 (189)
||||+-|..+++. +.|+|+|+++. +...++. .+.+|. ++.+. ..|++.++
T Consensus 83 cGtG~~s~~la~~----~~V~gvD~s~m-~~~a~~~~~~~~~~~~-~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 83 CGRGGWSYYAASR----PHVMDVRAYTL-GVGGHEVPRITESYGW-NIVKFKSRVDIHTLP 137 (265)
T ss_dssp CTTSHHHHHHHTS----TTEEEEEEECC-CCSSCCCCCCCCBTTG-GGEEEECSCCTTTSC
T ss_pred cCCCHHHHHHHHc----CcEEEEECchh-hhhhhhhhhhhhccCC-CeEEEecccCHhHCC
Confidence 9999999888875 78999999983 1111000 011121 67777 88988765
No 247
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=66.18 E-value=4 Score=30.78 Aligned_cols=48 Identities=6% Similarity=-0.087 Sum_probs=37.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|.|.-+..+++.. ..++++|+++.-++..++++.. ++.+...|+..+
T Consensus 51 cG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~ 98 (250)
T 2p7i_A 51 SFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDA 98 (250)
T ss_dssp CTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC
T ss_pred CCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc
Confidence 88888877777642 3799999999988888776543 688888888775
No 248
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=66.18 E-value=15 Score=23.70 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHh
Q psy11559 108 RSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALR 149 (189)
Q Consensus 108 Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~ 149 (189)
-++.|+..+.|.|..||.++. ..||.++.+.+|+
T Consensus 34 alqelekalaragarnvqiti--------saendeqakelle 67 (96)
T 2jvf_A 34 ALQELEKALARAGARNVQITI--------SAENDEQAKELLE 67 (96)
T ss_dssp HHHHHHHHHHHHTCSEEEEEE--------ECSSHHHHHHHHH
T ss_pred HHHHHHHHHHhccccceEEEE--------EecChHHHHHHHH
Confidence 467788889999999988765 3578777666553
No 249
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=66.02 E-value=13 Score=30.63 Aligned_cols=53 Identities=8% Similarity=-0.145 Sum_probs=45.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~ 134 (189)
++.|.-+..+++... ...+++.|+ +.-++..++++.+.|+. +|.+...|....
T Consensus 188 ~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 241 (363)
T 3dp7_A 188 GNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDR 241 (363)
T ss_dssp CTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSS
T ss_pred CCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccccc
Confidence 899998888888753 468999999 88899999999988874 699999998873
No 250
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=65.56 E-value=6.3 Score=33.88 Aligned_cols=44 Identities=7% Similarity=-0.049 Sum_probs=34.2
Q ss_pred CchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 82 PHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 82 PGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
.||-|+.++....+.+.|+++|+++... ....++.+..+|+..+
T Consensus 233 TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dl 276 (419)
T 3sso_A 233 WGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDA 276 (419)
T ss_dssp CCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCH
T ss_pred CCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEeccccc
Confidence 6777888887665678999999999852 2346799999998763
No 251
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=65.24 E-value=19 Score=29.53 Aligned_cols=51 Identities=4% Similarity=-0.251 Sum_probs=44.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~ 132 (189)
++.|.-+..+++... ...+++.|+ +.-++..++++...|+. +|.+...|..
T Consensus 211 ~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~ 262 (369)
T 3gwz_A 211 GGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF 262 (369)
T ss_dssp CTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC
Confidence 889998888888753 568999999 99999999999999974 6999999986
No 252
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=63.02 E-value=2 Score=34.51 Aligned_cols=50 Identities=12% Similarity=0.019 Sum_probs=32.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHH---HHHhCCCeEEEE--cCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGN---FHRLGVINSVVT--CLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~---l~r~g~~nv~~~--~~Da~~~~ 135 (189)
||||+-|..+++. +.|+|+|+++- +...+++ .+.+|. |+.+. ..|++.++
T Consensus 91 cGtG~~s~~la~~----~~V~gVD~s~m-~~~a~~~~~~~~~~~~-~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 91 CGRGSWSYYAASQ----PNVREVKAYTL-GTSGHEKPRLVETFGW-NLITFKSKVDVTKME 145 (276)
T ss_dssp CTTCHHHHHHHTS----TTEEEEEEECC-CCTTSCCCCCCCCTTG-GGEEEECSCCGGGCC
T ss_pred cCCCHHHHHHHHc----CCEEEEECchh-hhhhhhchhhhhhcCC-CeEEEeccCcHhhCC
Confidence 9999999888875 78999999983 1111100 001111 67778 88888765
No 253
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=61.66 E-value=8.9 Score=33.79 Aligned_cols=54 Identities=6% Similarity=-0.049 Sum_probs=44.4
Q ss_pred cCCchHHHHHHHhcCCC-----------------cEEEEEcCChHHHHHHHHHHHHhCCCe-----EEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT-----------------GVLFANDVSKERSKAIVGNFHRLGVIN-----SVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-----------------g~v~A~D~~~~Rl~~l~~~l~r~g~~n-----v~~~~~Da~~ 133 (189)
||.||-...++..+... ..+++.|+++.-++..+.|+...|+.+ +.+.+.|+..
T Consensus 178 CGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~ 253 (541)
T 2ar0_A 178 AGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLG 253 (541)
T ss_dssp CTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTS
T ss_pred cccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcc
Confidence 89999888888776422 379999999999999999998888875 7788888754
No 254
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=61.05 E-value=4.1 Score=32.22 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=35.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||+|.-|..|++. ...|+|+|+|+.-++..++ ..+|.....|+..++
T Consensus 48 cGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~ 94 (257)
T 4hg2_A 48 CGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTG 94 (257)
T ss_dssp CTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCC
T ss_pred CCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhc
Confidence 8999888888765 2589999999876554322 247899999998765
No 255
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=60.72 E-value=22 Score=28.96 Aligned_cols=74 Identities=11% Similarity=0.009 Sum_probs=49.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh--C---CCeEEEEcCCCCCCCCCCCcHHHHHHHHhhCCcE
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL--G---VINSVVTCLDGRQYGKPEENEAVVNYALRKRDVK 154 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~--g---~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~~~~ 154 (189)
.|-||-...++.. .+-..|+.+|+++.=++..++.+..+ | -.++.+...||+.+-...+ +++|+.
T Consensus 92 gGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~---------~~yDvI 161 (294)
T 3o4f_A 92 GGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTS---------QTFDVI 161 (294)
T ss_dssp CTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSS---------CCEEEE
T ss_pred CCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhcc---------ccCCEE
Confidence 4445544444432 22348999999999999998887654 2 2369999999998853211 134888
Q ss_pred EEecCCCCC
Q psy11559 155 LVPTGLDFG 163 (189)
Q Consensus 155 l~~~~~~~~ 163 (189)
+++..-+.|
T Consensus 162 i~D~~dp~~ 170 (294)
T 3o4f_A 162 ISDCTDPIG 170 (294)
T ss_dssp EESCCCCCC
T ss_pred EEeCCCcCC
Confidence 888755444
No 256
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=60.41 E-value=16 Score=28.78 Aligned_cols=48 Identities=6% Similarity=-0.097 Sum_probs=33.3
Q ss_pred cCCchHHHHHHHhcC---CCcEE--EEEcCChHHHHHHHHHHHHh-CCCeEEEE
Q psy11559 80 CAPHRAAKLAAALMK---NTGVL--FANDVSKERSKAIVGNFHRL-GVINSVVT 127 (189)
Q Consensus 80 AAPGgKT~~la~~~~---~~g~v--~A~D~~~~Rl~~l~~~l~r~-g~~nv~~~ 127 (189)
||+|.=|.+++..+. ....| +++|.|+.-++..++++.+. |+.++.+.
T Consensus 61 ~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~ 114 (292)
T 2aot_A 61 GGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFA 114 (292)
T ss_dssp CTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEE
T ss_pred CCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEE
Confidence 788876655543321 34544 99999999999999988764 66666543
No 257
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=59.76 E-value=27 Score=27.95 Aligned_cols=41 Identities=10% Similarity=-0.031 Sum_probs=31.6
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI 122 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~ 122 (189)
+|.|+-+..++.. ..+.|+++|+|+.=++..+++....+..
T Consensus 57 CG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~ 97 (302)
T 2vdw_A 57 FGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSG 97 (302)
T ss_dssp CTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC-
T ss_pred cCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhcccc
Confidence 7888766655542 2358999999999999999998887753
No 258
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=59.59 E-value=3.8 Score=32.53 Aligned_cols=52 Identities=6% Similarity=-0.178 Sum_probs=38.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh----CCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL----GVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~----g~~nv~~~~~Da~~~ 134 (189)
+|-|+=+..++.. + +.|+++|+++.-++..++++..+ .-.++.+...|+..+
T Consensus 81 ~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~ 136 (262)
T 2cmg_A 81 GFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD 136 (262)
T ss_dssp SCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC
T ss_pred CCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH
Confidence 6666666666654 4 79999999999998888776442 234688899998765
No 259
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=59.06 E-value=5.5 Score=33.08 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=17.8
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCCh
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSK 106 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~ 106 (189)
+|||+ ..+.+. .++ |.|+++|+.+
T Consensus 124 ~APGS--~VLr~~-~p~g~~VVavDL~~ 148 (344)
T 3r24_A 124 VAPGT--AVLRQW-LPTGTLLVDSDLND 148 (344)
T ss_dssp BCHHH--HHHHHH-SCTTCEEEEEESSC
T ss_pred CCCcH--HHHHHh-CCCCcEEEEeeCcc
Confidence 49999 444444 555 5999999987
No 260
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.85 E-value=13 Score=28.95 Aligned_cols=52 Identities=15% Similarity=0.118 Sum_probs=37.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.++..|-.++..+..|.++ ++.-+..++.+.+++
T Consensus 35 ~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 35 ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD---RAQCDALAGRAVEEF 86 (262)
T ss_dssp CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS---HHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC---HHHHHHHHHHHHHHh
Confidence 4799999999999999988888875578888999764 233344455555543
No 261
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=58.66 E-value=14 Score=28.51 Aligned_cols=47 Identities=13% Similarity=-0.103 Sum_probs=35.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..+++. ...++++|+|+.-++..+++.. .+ +...|+..++
T Consensus 63 cG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~ 109 (260)
T 2avn_A 63 GGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLP 109 (260)
T ss_dssp CTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCC
T ss_pred CCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCC
Confidence 8889888888764 3589999999999988887654 23 5666776653
No 262
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=57.99 E-value=7.3 Score=28.22 Aligned_cols=41 Identities=5% Similarity=-0.080 Sum_probs=32.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
+|.|.=+..++.. +.|+++|+|+.-++. ..++.+...|+..
T Consensus 32 cG~G~~~~~l~~~----~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~ 72 (170)
T 3q87_B 32 TSTGVITEQLRKR----NTVVSTDLNIRALES---------HRGGNLVRADLLC 72 (170)
T ss_dssp CTTCHHHHHHTTT----SEEEEEESCHHHHHT---------CSSSCEEECSTTT
T ss_pred cCccHHHHHHHhc----CcEEEEECCHHHHhc---------ccCCeEEECChhh
Confidence 7888777777654 299999999988876 4567888888865
No 263
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=57.88 E-value=12 Score=29.81 Aligned_cols=37 Identities=8% Similarity=-0.014 Sum_probs=31.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL 119 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~ 119 (189)
|++|.=|..+|.. .+.|+++|+|+.-++..+++++..
T Consensus 54 cGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 54 ASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp TTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS
T ss_pred CcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc
Confidence 8999988888875 368999999999999999987655
No 264
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=57.33 E-value=5.3 Score=33.26 Aligned_cols=47 Identities=6% Similarity=-0.112 Sum_probs=38.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
||.|+-+..+++.+.....|+++|+++.-++.. .++.+.+.|...+.
T Consensus 48 cGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~ 94 (421)
T 2ih2_A 48 CAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWE 94 (421)
T ss_dssp CTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCC
T ss_pred CCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcC
Confidence 899999999998875557999999999877544 46888899987653
No 265
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=56.90 E-value=25 Score=27.47 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=36.9
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+... ..|++.+.++.+++.+.+.++..|..++.++..|.++
T Consensus 36 asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 89 (286)
T 1xu9_A 36 ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89 (286)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 3344333444333223 4799999999999998888888886678888888753
No 266
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=56.79 E-value=17 Score=28.64 Aligned_cols=52 Identities=15% Similarity=0.086 Sum_probs=39.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 96 TGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 96 ~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
...|+.+|+++.+++...+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 33 Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 33 GARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTD---ELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTC---HHHHHHHHHHHHHTT
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCC---HHHHHHHHHHHHHHC
Confidence 35899999999999999999999885 47777888754 345556666666665
No 267
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=56.25 E-value=11 Score=27.76 Aligned_cols=33 Identities=12% Similarity=-0.022 Sum_probs=27.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGN 115 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~ 115 (189)
++.|.-+..++.. ...++++|+++.-++..+++
T Consensus 61 ~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 61 CGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp CTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh
Confidence 8899888888765 35899999999988888776
No 268
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=54.93 E-value=29 Score=27.87 Aligned_cols=68 Identities=10% Similarity=0.040 Sum_probs=45.3
Q ss_pred CCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.+++..+-.+| .|++.+.+..+++.+.+.++..|.. ++.++..|.++ ++.-++.++.+.+++
T Consensus 16 as~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~---~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 16 GANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS---REGFKMAADEVEARF 85 (319)
T ss_dssp TTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC---HHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC---HHHHHHHHHHHHHhC
Confidence 33444445554443334 7999999999999999988887753 58888889764 233344555555555
No 269
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=54.19 E-value=17 Score=28.01 Aligned_cols=51 Identities=16% Similarity=0.177 Sum_probs=37.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+..|.+..+++.+.+.++..+-.++.++..|.++ ++.=+..++.+.++
T Consensus 48 ~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~---~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 48 ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS---TEAVDALITQTVEK 98 (266)
T ss_dssp CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC---HHHHHHHHHHHHHH
Confidence 4799999999999999988887776678999999764 22333444444444
No 270
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=53.99 E-value=28 Score=26.35 Aligned_cols=65 Identities=8% Similarity=0.033 Sum_probs=41.4
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
||=-.+++..+-.. ..|++.+.+..+++.+.+.++..|. ++..+..|.++ ++.-+..++.+.+++
T Consensus 15 ~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 15 RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGF-KARGLVLNISD---IESIQNFFAEIKAEN 80 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC---HHHHHHHHHHHHHHc
Confidence 43333444433223 4799999999999999999988875 47788888754 223334444444443
No 271
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=53.34 E-value=5.6 Score=33.56 Aligned_cols=70 Identities=7% Similarity=-0.118 Sum_probs=47.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC---CC-----eEEEEcCCCCCCCCCCCcHHHHHHHH--h
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG---VI-----NSVVTCLDGRQYGKPEENEAVVNYAL--R 149 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g---~~-----nv~~~~~Da~~~~~~eENE~vV~~~L--~ 149 (189)
+|-|+-+..++.. . ...|+++|+++.-++..++++..++ +. ++.+...|+..+ ++.+. .
T Consensus 197 gG~G~~arellk~-~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~---------L~~~~~~~ 265 (364)
T 2qfm_A 197 GGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV---------LKRYAKEG 265 (364)
T ss_dssp CTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH---------HHHHHHHT
T ss_pred CChhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH---------HHhhhccC
Confidence 6667766556543 2 3689999999999999999986543 22 589999998643 23221 1
Q ss_pred h-CCcEEEecCC
Q psy11559 150 K-RDVKLVPTGL 160 (189)
Q Consensus 150 ~-~~~~l~~~~~ 160 (189)
+ +|+.+.+..-
T Consensus 266 ~~fDvII~D~~d 277 (364)
T 2qfm_A 266 REFDYVINDLTA 277 (364)
T ss_dssp CCEEEEEEECCS
T ss_pred CCceEEEECCCC
Confidence 2 3888888643
No 272
>3exc_X Uncharacterized protein; ferredoxin fold, double split beta-alpha-beta fold, dimer, C aspartate, RNA'ASE, hydrolase; 2.25A {Sulfolobus solfataricus} SCOP: d.58.58.0
Probab=52.80 E-value=20 Score=23.77 Aligned_cols=26 Identities=27% Similarity=0.525 Sum_probs=22.4
Q ss_pred EEEEEcCC-hHHHHHHHHHHHHhCCCe
Q psy11559 98 VLFANDVS-KERSKAIVGNFHRLGVIN 123 (189)
Q Consensus 98 ~v~A~D~~-~~Rl~~l~~~l~r~g~~n 123 (189)
.+++.|++ .+|...+.+.++++|+..
T Consensus 6 vlV~YDI~~~krr~kv~k~l~~yGl~r 32 (91)
T 3exc_X 6 LLVVYDVSDDSKRNKLANNLKKLGLER 32 (91)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEeCCCchHHHHHHHHHHHhCCcc
Confidence 58999997 588899999999999753
No 273
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=51.64 E-value=13 Score=29.00 Aligned_cols=53 Identities=11% Similarity=-0.014 Sum_probs=40.9
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 96 TGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 96 ~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
...|+.+|.++..++.+.+.+++++-.++..+..|.++ +++-++.++.+.+++
T Consensus 32 Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 32 GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS---DEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC---HHHHHHHHHHHHHHh
Confidence 35899999999999999999999887678888888764 344455666666654
No 274
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=51.62 E-value=14 Score=27.27 Aligned_cols=44 Identities=9% Similarity=-0.005 Sum_probs=33.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
++.|.-+..++.. + ..++++|+++.-++..++++. .+...|+..
T Consensus 41 ~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~ 84 (230)
T 3cc8_A 41 CSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKLD-------HVVLGDIET 84 (230)
T ss_dssp CTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTSS-------EEEESCTTT
T ss_pred CCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhCC-------cEEEcchhh
Confidence 8899888888876 2 799999999998887776542 455666654
No 275
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=51.43 E-value=30 Score=26.70 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=37.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 36 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 36 ADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITD---DAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHHT
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC---HHHHHHHHHHHHHHc
Confidence 4799999999999999999988874 47788888764 233444555555554
No 276
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=50.92 E-value=6 Score=30.30 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=28.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHh
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRL 119 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~ 119 (189)
||+|.-+..++.. + .+.|+++|+++.-++.++++++..
T Consensus 65 cG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 65 SGPTIYQLLSACE-S-FTEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CTTCCGGGTTGGG-T-EEEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCccHHHHHHhhc-c-cCeEEEecCCHHHHHHHHHHHhcC
Confidence 7777766665543 1 148999999999999998887654
No 277
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=49.43 E-value=25 Score=27.37 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=43.0
Q ss_pred CchHHHHHHHhcCC-CcEEEEEcCChHHHHHHHHHHHHhCCC--eEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 82 PHRAAKLAAALMKN-TGVLFANDVSKERSKAIVGNFHRLGVI--NSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 82 PGgKT~~la~~~~~-~g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
-||=-.+++..+-. ...|+..|.++.+++.+.+.++..|.. ++..+..|.++ +++-++.++.+.+++
T Consensus 20 s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 20 GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN---EDETARAVDAVTAWH 89 (281)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS---HHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC---HHHHHHHHHHHHHHc
Confidence 34333344443322 347999999999999999999888753 57788888764 233344555555443
No 278
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=49.00 E-value=27 Score=26.50 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=41.7
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
|-||=-.+++..+-.. ..|++.|.+..+++.+.+.++..+. ++.++..|.++ ++.-+..++.+.++
T Consensus 17 as~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 17 SGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGG-TAISVAVDVSD---PESAKAMADRTLAE 83 (253)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTS---HHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-cEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 3343334444443323 4799999999999999999888764 57778888764 22333444444444
No 279
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=48.80 E-value=51 Score=29.79 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=39.9
Q ss_pred cCCchH---HHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe-EEEEcCCCCCCCCC
Q psy11559 80 CAPHRA---AKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN-SVVTCLDGRQYGKP 137 (189)
Q Consensus 80 AAPGgK---T~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n-v~~~~~Da~~~~~~ 137 (189)
||.|-= +...++.....-+|+|+|.++. ....++..+.-|..+ |+++..|.+++..|
T Consensus 366 aGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~LP 426 (637)
T 4gqb_A 366 AGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVAP 426 (637)
T ss_dssp CTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCCS
T ss_pred CCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccCC
Confidence 788854 4555554433337999999986 445555667777764 99999999997653
No 280
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=47.36 E-value=33 Score=26.62 Aligned_cols=37 Identities=14% Similarity=0.041 Sum_probs=31.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
..|++.+.+..+++.+.+.++..+-.++.++..|.++
T Consensus 37 ~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~ 73 (311)
T 3o26_A 37 IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD 73 (311)
T ss_dssp CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC
Confidence 4899999999999988888887776678888899765
No 281
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=47.22 E-value=42 Score=25.58 Aligned_cols=65 Identities=17% Similarity=0.142 Sum_probs=40.1
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
||=-.+++..+-.. ..|++.|.++.+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 12 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 12 QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSD---RDQVFAAVEQARKTL 77 (256)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS---HHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCC---HHHHHHHHHHHHHHh
Confidence 43333444433223 4799999999999888888877764 47777888654 233334444544444
No 282
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=47.00 E-value=37 Score=29.12 Aligned_cols=50 Identities=14% Similarity=0.134 Sum_probs=40.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|-|.-...+|..+.+...+.-.|.++.|++.+.+.+ +++.++++|+++.
T Consensus 241 ~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l-----~~~~Vi~GD~td~ 290 (461)
T 4g65_A 241 VGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEEL-----ENTIVFCGDAADQ 290 (461)
T ss_dssp ECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHC-----TTSEEEESCTTCH
T ss_pred EcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHC-----CCceEEeccccch
Confidence 6655555678888887788999999999999998875 4678899999873
No 283
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=46.78 E-value=30 Score=27.02 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=36.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.++..|. ++..+..|.++ +++-+..++.+.+++
T Consensus 29 ~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 29 AKILLGARRQARIEAIATEIRDAGG-TALAQVLDVTD---RHSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTC-EEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEcCCCC---HHHHHHHHHHHHHHc
Confidence 4799999999999999999988774 47777788754 233444555555543
No 284
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=46.64 E-value=35 Score=29.99 Aligned_cols=52 Identities=10% Similarity=-0.059 Sum_probs=43.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
||.|-=|..||.+ ...|+++|.++.=++..+..+...|..+|...+.|+..+
T Consensus 75 CG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~ 126 (569)
T 4azs_A 75 CAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV 126 (569)
T ss_dssp CTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH
T ss_pred CCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH
Confidence 8888878888875 368999999999999999999888876888888877543
No 285
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=46.16 E-value=32 Score=26.83 Aligned_cols=67 Identities=12% Similarity=0.120 Sum_probs=42.6
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.++|..+-.. ..|+..|.+..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 34 as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 34 SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTS---ESEIIEAFARLDEQG 101 (271)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTC---HHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCC---HHHHHHHHHHHHHHC
Confidence 3343333444433223 4799999999999999998888775 47788888754 233344455555544
No 286
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=45.87 E-value=35 Score=29.27 Aligned_cols=49 Identities=8% Similarity=-0.018 Sum_probs=37.3
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
+|-|---.++|..+...| .|+..|.++.+++.+.+. ++ +.++.+|++..
T Consensus 9 ~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~---~~---~~~i~Gd~~~~ 58 (461)
T 4g65_A 9 LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK---YD---LRVVNGHASHP 58 (461)
T ss_dssp ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH---SS---CEEEESCTTCH
T ss_pred ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh---cC---cEEEEEcCCCH
Confidence 566666678898887666 599999999999888764 34 46778888763
No 287
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=45.72 E-value=28 Score=26.70 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=36.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHHh--CCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRL--GVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~--g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.+... +..++.++..|.++ +++-++.++.+.+++
T Consensus 32 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 32 YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD---CTKADTEIKDIHQKY 85 (250)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC---HHHHHHHHHHHHHhc
Confidence 47999999999999999888877 33567788888764 233344455555443
No 288
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=45.72 E-value=28 Score=26.64 Aligned_cols=54 Identities=7% Similarity=0.000 Sum_probs=36.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.+...+-..+..+..|...- .++.-++.++.+.+++
T Consensus 37 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 37 ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTC-TSENCQQLAQRIAVNY 90 (252)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTC-CHHHHHHHHHHHHHHC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccC-CHHHHHHHHHHHHHhC
Confidence 47999999999999998888877655677777886211 1233345555555554
No 289
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=45.54 E-value=30 Score=26.92 Aligned_cols=51 Identities=14% Similarity=0.244 Sum_probs=36.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|++.|.+..+++.+.+.++..|.. +..+..|.++ ++.-+..++.+.+++
T Consensus 53 ~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d---~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 53 AMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVND---ATAVDALVESTLKEF 103 (270)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHTCC-CEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCc-EEEEEEeCCC---HHHHHHHHHHHHHHc
Confidence 47999999999999999999888764 5667778654 233444555555543
No 290
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.45 E-value=30 Score=26.90 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=40.4
Q ss_pred CchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCC--eEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 82 PHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVI--NSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 82 PGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
-||=-.+++..+-.+ ..|++.|.++.+++.+.+.+...|.. ++.++..|.++ ++.-++.++.+.++
T Consensus 15 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 15 SNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT---EDGQDQIINSTLKQ 83 (280)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS---HHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC---HHHHHHHHHHHHHh
Confidence 333333444433223 47999999999998888887766642 57888888754 22333444444444
No 291
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=45.02 E-value=45 Score=25.73 Aligned_cols=51 Identities=12% Similarity=0.119 Sum_probs=38.3
Q ss_pred cEEEEEcCChHHHHHHHHHHHH-hCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHR-LGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r-~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.+.. .|. ++..+..|.++ +++-+..++.+.+++
T Consensus 45 ~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 45 ARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAE---PDAPAELARRAAEAF 96 (266)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTS---TTHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhcCC-cEEEEEecCCC---HHHHHHHHHHHHHHc
Confidence 4799999999999988888876 554 57888888765 345566677666654
No 292
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=44.55 E-value=29 Score=26.65 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=36.6
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.+..+++.+.+.++..|. ++..+..|.++ ++.-++.++.+.+++
T Consensus 37 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 37 ASVVVTDLKSEGAEAVAAAIRQAGG-KAIGLECNVTD---EQHREAVIKAALDQF 87 (256)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC---HHHHHHHHHHHHHHc
Confidence 4799999999999999999988874 47778888764 233344455555543
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=43.70 E-value=58 Score=25.82 Aligned_cols=50 Identities=12% Similarity=-0.050 Sum_probs=32.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
||.|. |+..|..++ ..++++|+++.=++..++++++..-........|++
T Consensus 244 ~GsGt-~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~~~~~~ 293 (297)
T 2zig_A 244 AGTGT-TLIAAARWG--RRALGVELVPRYAQLAKERFAREVPGFSLEVLDGAT 293 (297)
T ss_dssp CTTTH-HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEECC--
T ss_pred CCCCH-HHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHHhccccchhhCCccc
Confidence 55554 444444443 489999999999999999999874332233344443
No 294
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=42.82 E-value=16 Score=29.54 Aligned_cols=30 Identities=10% Similarity=0.082 Sum_probs=25.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKA 111 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~ 111 (189)
|++|+=|..+++. +.+.|+|+|+++.=++.
T Consensus 94 cGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~ 123 (291)
T 3hp7_A 94 ASTGGFTDVMLQN--GAKLVYAVDVGTNQLVW 123 (291)
T ss_dssp CTTSHHHHHHHHT--TCSEEEEECSSSSCSCH
T ss_pred CCccHHHHHHHhC--CCCEEEEEECCHHHHHH
Confidence 9999999888875 34699999999976655
No 295
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=42.38 E-value=34 Score=26.67 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=35.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|++.|.+..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.++
T Consensus 49 ~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 49 IAVYGCARDAKNVSAAVDGLRAAGH-DVDGSSCDVTS---TDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEEESCHHHHHHHHHHHHTTTC-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEECCCCC---HHHHHHHHHHHHHH
Confidence 4799999999999999888887774 47788888754 23333444454444
No 296
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=42.35 E-value=28 Score=26.25 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=27.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGN 115 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~ 115 (189)
++.|.-+..+++. ...|+++|+|+.-++..+++
T Consensus 50 cG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 50 CGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp CTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT
T ss_pred CCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh
Confidence 8899988888875 34799999999988877765
No 297
>2ivy_A Hypothetical protein SSO1404; structural genomics, unknown function, CAS, RNAI, crispr; 1.4A {Sulfolobus solfataricus} SCOP: d.58.58.1 PDB: 2i8e_A
Probab=42.08 E-value=29 Score=23.41 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=22.3
Q ss_pred EEEEEcCC-hHHHHHHHHHHHHhCCCe
Q psy11559 98 VLFANDVS-KERSKAIVGNFHRLGVIN 123 (189)
Q Consensus 98 ~v~A~D~~-~~Rl~~l~~~l~r~g~~n 123 (189)
.|++.|++ .+|...+.+.|+++|+..
T Consensus 5 ~lV~YDI~~~kr~~kv~k~L~~yGl~r 31 (101)
T 2ivy_A 5 YLIFYDITDDNLRNRVAEFLKKKGLDR 31 (101)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHTTCEE
T ss_pred EEEEEeCCChHHHHHHHHHHHHhCChh
Confidence 57899996 888999999999999653
No 298
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=41.98 E-value=52 Score=25.50 Aligned_cols=67 Identities=18% Similarity=0.123 Sum_probs=41.0
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.+++..+..+ ..|++.|.++.+++.+.+.++..|. ++.++..|.++ +++=+..++.+.+++
T Consensus 30 as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 30 ATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRS---VPEIEALVAAVVERY 97 (277)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCC---HHHHHHHHHHHHHHh
Confidence 3343334444433223 4799999999999888888877774 47777888754 223334444544444
No 299
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=41.55 E-value=47 Score=29.21 Aligned_cols=55 Identities=16% Similarity=0.067 Sum_probs=46.2
Q ss_pred cCCchHHHHHHHhcCC--CcEEEEEcCChHHHHHHHHHHHHhCC--CeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKN--TGVLFANDVSKERSKAIVGNFHRLGV--INSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~--~g~v~A~D~~~~Rl~~l~~~l~r~g~--~nv~~~~~Da~~~ 134 (189)
||.||=...++..+.. ...+++.|+++.-++..+.|+.-.|+ .++.+.+.|....
T Consensus 230 CGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~ 288 (542)
T 3lkd_A 230 MGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDE 288 (542)
T ss_dssp CTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTS
T ss_pred cchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecc
Confidence 8889877777777642 45899999999999999999999998 5788999998654
No 300
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=41.31 E-value=28 Score=28.32 Aligned_cols=69 Identities=16% Similarity=0.074 Sum_probs=46.7
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC-C---C----CCCcHHHHHHHHhhC-C-cEEEecCCCCCCCC
Q psy11559 98 VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY-G---K----PEENEAVVNYALRKR-D-VKLVPTGLDFGTEG 166 (189)
Q Consensus 98 ~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~-~---~----~eENE~vV~~~L~~~-~-~~l~~~~~~~~~~g 166 (189)
.+.|.|.+..-++..-..++.+|++||.++.+|.... . + -..-.+.|+.+-+.+ + |.+--...+.|+|.
T Consensus 77 Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~ 155 (310)
T 3apt_A 77 HLTVAGQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPE 155 (310)
T ss_dssp EEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTT
T ss_pred EeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCC
Confidence 6899999999999888889999999999999997654 2 1 113445555543332 3 65544444444443
No 301
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=41.22 E-value=28 Score=27.18 Aligned_cols=66 Identities=8% Similarity=0.015 Sum_probs=38.5
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.+++..+-.. ..|++.|.++.+++.+.+.+...| ++.++..|.++ ++.-++.++.+.+++
T Consensus 37 as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 37 GSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSS---EAGARRLAQALGELS 103 (276)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTS---HHHHHHHHHHHHHHC
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCC---HHHHHHHHHHHHHhc
Confidence 3343333444433223 479999999998887777766555 57777888653 223334444444443
No 302
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=40.98 E-value=44 Score=26.13 Aligned_cols=53 Identities=8% Similarity=-0.092 Sum_probs=36.1
Q ss_pred CCchHHHHHHHhcC-CCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMK-NTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~-~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.++|..+- ....|++.|.+..+++.+.+.+...+-..+..+..|.++
T Consensus 41 as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d 94 (281)
T 4dry_A 41 GGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94 (281)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC
Confidence 33433334444332 234799999999999998888877765556788888764
No 303
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=40.94 E-value=9 Score=30.11 Aligned_cols=74 Identities=16% Similarity=0.097 Sum_probs=35.3
Q ss_pred cCCc-hHHHHHHHhc---CCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC-Cc
Q psy11559 80 CAPH-RAAKLAAALM---KNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR-DV 153 (189)
Q Consensus 80 AAPG-gKT~~la~~~---~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~-~~ 153 (189)
..|| |||+.+..+. ..+| .|+..|++++.-...-..+..+......+...++..+ .|.-+..+|+.. ++
T Consensus 13 ~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~q~~~~~~al~~gl~~~~~~~~~~~~~~~-----~e~~l~~~L~~~pdl 87 (228)
T 2r8r_A 13 AAPGVGKTYAMLQAAHAQLRQGVRVMAGVVETHGRAETEALLNGLPQQPLLRTEYRGMTL-----EEMDLDALLKAAPSL 87 (228)
T ss_dssp SSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCTTCHHHHHHHTTSCBCCCEEEEETTEEE-----EECCHHHHHHHCCSE
T ss_pred CCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCCCCChhHHHHhcCccccCcceeecCCccc-----ccccHHHHHhcCCCE
Confidence 4566 8998754332 2345 5777888764322222222222211111222333221 223355555555 88
Q ss_pred EEEec
Q psy11559 154 KLVPT 158 (189)
Q Consensus 154 ~l~~~ 158 (189)
.++|-
T Consensus 88 vIVDE 92 (228)
T 2r8r_A 88 VLVDE 92 (228)
T ss_dssp EEESC
T ss_pred EEEeC
Confidence 88873
No 304
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=40.46 E-value=46 Score=25.03 Aligned_cols=49 Identities=8% Similarity=0.058 Sum_probs=34.3
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCC
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDG 131 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da 131 (189)
||=-.+++..+-.+ ..|+..|.+..+++.+.+.++..+..++.+...|.
T Consensus 24 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 24 RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 33333444433223 47999999999999999999988866667776665
No 305
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.38 E-value=48 Score=26.14 Aligned_cols=67 Identities=13% Similarity=0.195 Sum_probs=41.1
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCC--eEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVI--NSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~--nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
|-||=-.+++..+-.. ..|++.|.++.+++.+.+.+...|.. ++.++..|.++ ++.-++.++.+.++
T Consensus 34 as~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 34 SSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE---ASGQDDIINTTLAK 103 (297)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS---HHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC---HHHHHHHHHHHHHh
Confidence 3343333444333223 47999999999999888888777642 57788888754 22333444444444
No 306
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=40.30 E-value=35 Score=23.61 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=31.4
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
.|-|.-...++..+...| .|+++|.++.+++.+++ .|+ .++.+|++.
T Consensus 13 iG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~---~~i~gd~~~ 60 (140)
T 3fwz_A 13 VGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGV---RAVLGNAAN 60 (140)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTC---EEEESCTTS
T ss_pred ECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCC---CEEECCCCC
Confidence 455655566666654444 79999999999987764 454 456667654
No 307
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=39.81 E-value=46 Score=25.48 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=30.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
..|+..|.+..+++.+.+.++..|. ++.++..|.++
T Consensus 32 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 67 (252)
T 3h7a_A 32 FTVFAGRRNGEKLAPLVAEIEAAGG-RIVARSLDARN 67 (252)
T ss_dssp CEEEEEESSGGGGHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECcCCC
Confidence 4799999999999999999988874 57888888754
No 308
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=39.79 E-value=93 Score=21.60 Aligned_cols=64 Identities=11% Similarity=0.099 Sum_probs=40.5
Q ss_pred HHHH-hcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC-CcEEEecCCC
Q psy11559 88 LAAA-LMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR-DVKLVPTGLD 161 (189)
Q Consensus 88 ~la~-~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~-~~~l~~~~~~ 161 (189)
|+.+ .|+.+-+|..+|=++.=...++..++++|+..+.. ..|| ++.++.+-+.. |+.+.++..|
T Consensus 3 ~~~e~~m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~-a~~g---------~~al~~~~~~~~DlillD~~MP 68 (134)
T 3to5_A 3 HMMEAILNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQE-ADDG---------LTALPMLKKGDFDFVVTDWNMP 68 (134)
T ss_dssp ------CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEE-ESSH---------HHHHHHHHHHCCSEEEEESCCS
T ss_pred hhhHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEE-ECCH---------HHHHHHHHhCCCCEEEEcCCCC
Confidence 4444 34444478999999999999999999999875433 2333 34444444444 8888887643
No 309
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=39.75 E-value=66 Score=24.74 Aligned_cols=54 Identities=7% Similarity=-0.056 Sum_probs=36.7
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCC-eEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVI-NSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~-nv~~~~~Da~~ 133 (189)
-|-||=-.+++..+-.. ..|++.+.+..+++.+.+.++..|.. ++.++..|.++
T Consensus 39 GasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 39 GASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94 (279)
T ss_dssp STTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC
Confidence 34444444444443223 47999999999999888888887753 57777888753
No 310
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=39.52 E-value=20 Score=28.93 Aligned_cols=43 Identities=19% Similarity=0.077 Sum_probs=22.4
Q ss_pred cCCc-hHHHHHHHhcC----C------CcEEEEEcCChH-HHHHHHHHHHHhCCC
Q psy11559 80 CAPH-RAAKLAAALMK----N------TGVLFANDVSKE-RSKAIVGNFHRLGVI 122 (189)
Q Consensus 80 AAPG-gKT~~la~~~~----~------~g~v~A~D~~~~-Rl~~l~~~l~r~g~~ 122 (189)
+.|| |||+.+.+++. + .+.++=+|.... +-..+.+.++++|+.
T Consensus 114 G~~GsGKT~la~~la~~~~~~~~~gg~~~~vlyi~~e~~~~~~~l~~~~~~~g~~ 168 (324)
T 2z43_A 114 GEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKALGLD 168 (324)
T ss_dssp ESTTSSHHHHHHHHHHHTTSCGGGTCCSCEEEEEESSSCCCHHHHHHHHHHTTCC
T ss_pred CCCCCCHhHHHHHHHHHHhcccccCCCCCeEEEEECCCCCCHHHHHHHHHHhCCC
Confidence 6666 99987655431 1 344444444332 233344456667663
No 311
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=39.47 E-value=93 Score=21.51 Aligned_cols=41 Identities=5% Similarity=-0.131 Sum_probs=22.6
Q ss_pred CCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q psy11559 81 APHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV 121 (189)
Q Consensus 81 APGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~ 121 (189)
+++|-+.....++...-+|.-+|-++.-...++..+++.|-
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~ 50 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD 50 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTSTT
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC
Confidence 44454444444444445788899999999999999998763
No 312
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=39.32 E-value=93 Score=24.03 Aligned_cols=53 Identities=11% Similarity=0.117 Sum_probs=36.5
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-|-||=-.+++..+-.+| .|++.+.++.+++.+.+.++..|. ++..+..|.++
T Consensus 51 GasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d 104 (285)
T 2c07_A 51 GAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSK 104 (285)
T ss_dssp STTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTC
T ss_pred CCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCC
Confidence 444554555665554445 788899999998888887776664 47777888753
No 313
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=39.17 E-value=28 Score=26.77 Aligned_cols=50 Identities=10% Similarity=0.115 Sum_probs=34.9
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+..|.++.+++.+.+.++..|. ++.++..|.++ +++-++.++.+.++
T Consensus 31 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 31 ARVVITGRTKEKLEEAKLEIEQFPG-QILTVQMDVRN---TDDIQKMIEQIDEK 80 (257)
T ss_dssp CEEEEEESCHHHHHHHHHHHCCSTT-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 4799999999999988888776664 57788888754 23334445555444
No 314
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=39.15 E-value=89 Score=23.33 Aligned_cols=53 Identities=17% Similarity=0.224 Sum_probs=35.7
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-|-||=-.+++..+-..| .|++.|.++.+++.+.+.++..|. ++.++..|.++
T Consensus 18 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 71 (255)
T 1fmc_A 18 GAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITS 71 (255)
T ss_dssp TTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCC
Confidence 344544445555443344 799999999999888888877664 46777778653
No 315
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.11 E-value=65 Score=24.72 Aligned_cols=37 Identities=11% Similarity=0.009 Sum_probs=29.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHH-hCCCeEEEEcCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHR-LGVINSVVTCLDGRQ 133 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r-~g~~nv~~~~~Da~~ 133 (189)
..|+..|.+..+++.+.+.+.. .+-.++..+..|.++
T Consensus 33 ~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 70 (265)
T 3lf2_A 33 AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70 (265)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC
Confidence 4799999999999988888877 555558888888764
No 316
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=38.81 E-value=55 Score=25.75 Aligned_cols=68 Identities=15% Similarity=0.104 Sum_probs=40.9
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
-|-||=-.+++..+-.+ ..|++.|.++.+++.+.+.++..|. ++.++..|.++ +++-++.++.+.+++
T Consensus 41 Gas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 41 GASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVTD---EDGIQAMVAQIESEV 109 (291)
T ss_dssp TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTC---HHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEecCCC---HHHHHHHHHHHHHHc
Confidence 33444334444433223 4799999999999888888877764 46677788654 223334444444444
No 317
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=38.58 E-value=81 Score=26.72 Aligned_cols=68 Identities=9% Similarity=0.026 Sum_probs=44.5
Q ss_pred cCCc-hHHHHHHHhcCCC-cEEEEEcCChHH------------HHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHH
Q psy11559 80 CAPH-RAAKLAAALMKNT-GVLFANDVSKER------------SKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVN 145 (189)
Q Consensus 80 AAPG-gKT~~la~~~~~~-g~v~A~D~~~~R------------l~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~ 145 (189)
|+.| |+.+.++..+... ..|+.++.+..+ .+.+++.++..|.. +..+..|.++ ++.=+++++
T Consensus 68 assGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~Dvtd---~~~v~~~v~ 143 (418)
T 4eue_A 68 ASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLV-AKNFIEDAFS---NETKDKVIK 143 (418)
T ss_dssp CSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCC-EEEEESCTTC---HHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCc-EEEEEeeCCC---HHHHHHHHH
Confidence 6666 7776676666543 478888876543 46677777777754 7778888765 344456666
Q ss_pred HHHhhC
Q psy11559 146 YALRKR 151 (189)
Q Consensus 146 ~~L~~~ 151 (189)
.+.+++
T Consensus 144 ~i~~~~ 149 (418)
T 4eue_A 144 YIKDEF 149 (418)
T ss_dssp HHHHTT
T ss_pred HHHHHc
Confidence 666665
No 318
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=38.32 E-value=86 Score=24.34 Aligned_cols=51 Identities=12% Similarity=0.136 Sum_probs=37.9
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|. +..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 54 ~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 54 FDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLAD---LSSHQATVDAVVAEF 105 (280)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTS---GGGHHHHHHHHHHHH
T ss_pred CeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCC---HHHHHHHHHHHHHHc
Confidence 47888885 88888888888888774 47888888765 445566777766654
No 319
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.30 E-value=62 Score=24.75 Aligned_cols=52 Identities=12% Similarity=0.047 Sum_probs=35.9
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-.. ..|++.|.+..+++.+.+.+...|. ++.++..|.++
T Consensus 37 as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 89 (262)
T 3rkr_A 37 ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGG-EAESHACDLSH 89 (262)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-ceeEEEecCCC
Confidence 3343334444433223 4799999999999999999888774 57788888754
No 320
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=38.06 E-value=71 Score=24.03 Aligned_cols=53 Identities=8% Similarity=0.120 Sum_probs=35.0
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-|-||=-.+++..+-.+ ..|++.|.+..++..+.+.++..|. ++.++..|.++
T Consensus 20 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 73 (260)
T 3awd_A 20 GGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTN 73 (260)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEecCCC
Confidence 34454444555444323 4799999999988888777777664 47777888654
No 321
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=37.99 E-value=37 Score=27.30 Aligned_cols=46 Identities=13% Similarity=0.172 Sum_probs=32.0
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
++-|.-..++++.+...|.+++.|.++.+++ +++ .| +.++.+|+++
T Consensus 121 ~G~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~----~~---~~~i~gd~~~ 166 (336)
T 1lnq_A 121 CGWSESTLECLRELRGSEVFVLAEDENVRKK-VLR----SG---ANFVHGDPTR 166 (336)
T ss_dssp ESCCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH----TT---CEEEESCTTS
T ss_pred ECCcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh----CC---cEEEEeCCCC
Confidence 6666666778877766666899999999998 653 22 3455556544
No 322
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=37.73 E-value=18 Score=29.37 Aligned_cols=40 Identities=13% Similarity=0.117 Sum_probs=32.7
Q ss_pred HhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 91 ALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 91 ~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
+.+....+++.+|.++.-++.|++|++. ..++++...|+.
T Consensus 108 EaLS~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~ 147 (283)
T 2oo3_A 108 NQLRSQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGV 147 (283)
T ss_dssp HHSCTTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHH
T ss_pred HHcCCCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHH
Confidence 4444446899999999999999999986 357999999973
No 323
>3lho_A Putative hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: PG4; 1.80A {Shewanella frigidimarina}
Probab=37.16 E-value=17 Score=29.26 Aligned_cols=28 Identities=36% Similarity=0.494 Sum_probs=24.6
Q ss_pred eEEEEcCCC--CCHHHHHHHHHHCCCeeee
Q psy11559 13 LTIRTNTLK--TRRRDLAQALVNRGVNLDP 40 (189)
Q Consensus 13 ~~lRvN~~k--~~~~~~~~~L~~~g~~~~~ 40 (189)
+++|||.++ .+.+++.+.|++.|+....
T Consensus 166 ~T~~v~~L~~~~dI~~v~~~l~~~G~~~n~ 195 (267)
T 3lho_A 166 FTVSINDLPEFERIEDVNQALKQAGFVLNS 195 (267)
T ss_dssp EEEETTTCTTCCCHHHHHHHHHHTTCCBCC
T ss_pred eehhhcccCCCCCHHHHHHHHHHcCCCccc
Confidence 789999998 7899999999999997653
No 324
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=37.13 E-value=58 Score=25.22 Aligned_cols=67 Identities=18% Similarity=0.129 Sum_probs=41.0
Q ss_pred CCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHH-hCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHR-LGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r-~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.+++..+-..| .|+..|.+..++..+.+.+.. .| .++..+..|.++ ++.-++.++.+.+++
T Consensus 35 as~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 35 GGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRA---PPAVMAAVDQALKEF 103 (277)
T ss_dssp TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEcCCCC---HHHHHHHHHHHHHHc
Confidence 33443344444443344 799999999998887777754 35 357888888764 233344555555543
No 325
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=37.05 E-value=60 Score=24.99 Aligned_cols=64 Identities=20% Similarity=0.186 Sum_probs=39.6
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCC------------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHh
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVS------------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALR 149 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~------------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~ 149 (189)
||=-.++|..+-.. ..|++.|.+ ..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+
T Consensus 23 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~v~~~~~~~~~ 98 (278)
T 3sx2_A 23 RGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-RIVARQADVRD---RESLSAALQAGLD 98 (278)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-CEEEEECCTTC---HHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-eEEEEeCCCCC---HHHHHHHHHHHHH
Confidence 33333444433223 479999987 7888888888888875 57888888764 2333444555544
Q ss_pred h
Q psy11559 150 K 150 (189)
Q Consensus 150 ~ 150 (189)
+
T Consensus 99 ~ 99 (278)
T 3sx2_A 99 E 99 (278)
T ss_dssp H
T ss_pred H
Confidence 4
No 326
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=36.49 E-value=79 Score=23.90 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=33.9
Q ss_pred CchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 82 PHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-||=-.+++..+-..| .|++.|.+..+++.+.+.++..|. ++..+..|.++
T Consensus 16 s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~ 67 (247)
T 2jah_A 16 SSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGA-KVHVLELDVAD 67 (247)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 3433334444332234 799999999999888888877664 47777888654
No 327
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=36.45 E-value=37 Score=26.51 Aligned_cols=50 Identities=10% Similarity=0.036 Sum_probs=34.8
Q ss_pred chHHHHHHHhcC-CCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 83 HRAAKLAAALMK-NTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 83 GgKT~~la~~~~-~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
||=-.+++..+- ....|+..|.+..+++.+.+.++..|. ++..+..|.++
T Consensus 42 ~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d 92 (276)
T 3r1i_A 42 TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQ 92 (276)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 433334443332 234899999999999999999988775 46777888754
No 328
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=36.20 E-value=89 Score=20.37 Aligned_cols=37 Identities=8% Similarity=0.153 Sum_probs=28.7
Q ss_pred HhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEE
Q psy11559 91 ALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVT 127 (189)
Q Consensus 91 ~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~ 127 (189)
..+.....|+..+-+..|.......|+++|++||.++
T Consensus 47 ~~l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l 83 (106)
T 3hix_A 47 SSLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSEL 83 (106)
T ss_dssp HHSCTTSCEEEECSSHHHHHHHHHHHHHTTCSCEEEC
T ss_pred hcCCCCCeEEEEECCCChHHHHHHHHHHcCCcCEEEe
Confidence 3344445677777889999999999999999987654
No 329
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=35.72 E-value=62 Score=24.29 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=31.5
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
.+-|.-...++..+...|.|+++|.++.+++.+. .| +.++.+|+++
T Consensus 15 ~G~G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~~---~~~i~gd~~~ 60 (234)
T 2aef_A 15 CGWSESTLECLRELRGSEVFVLAEDENVRKKVLR-----SG---ANFVHGDPTR 60 (234)
T ss_dssp ESCCHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----TT---CEEEESCTTC
T ss_pred ECCChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----cC---CeEEEcCCCC
Confidence 5556556678888776666889999999987664 23 3455566543
No 330
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=35.62 E-value=24 Score=26.19 Aligned_cols=42 Identities=10% Similarity=-0.076 Sum_probs=30.7
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
++.|.-+..++.. +++|+++.-++..+++ ++.+...|+..++
T Consensus 56 ~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~ 97 (219)
T 1vlm_A 56 VGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLP 97 (219)
T ss_dssp CTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCC
T ss_pred CCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCC
Confidence 7788776665432 9999999988888776 4566777776543
No 331
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=35.57 E-value=1e+02 Score=24.00 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=29.1
Q ss_pred cEEEEEc-CChHHHHHHHHHHH-HhCCCeEEEEcCCCCCC
Q psy11559 97 GVLFAND-VSKERSKAIVGNFH-RLGVINSVVTCLDGRQY 134 (189)
Q Consensus 97 g~v~A~D-~~~~Rl~~l~~~l~-r~g~~nv~~~~~Da~~~ 134 (189)
..|++.| .+..+++.+.+.++ ..| .++.++..|.++.
T Consensus 34 ~~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 34 YAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNV 72 (291)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CeEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCc
Confidence 4799999 99999988888876 555 3578888887764
No 332
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=35.36 E-value=90 Score=22.56 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=26.5
Q ss_pred HHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEE
Q psy11559 89 AAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVV 126 (189)
Q Consensus 89 la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~ 126 (189)
+...+.+.|.++..+........+.+.+++.|+ ++.+
T Consensus 128 ~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~-~~~~ 164 (204)
T 3e05_A 128 VDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY-MVEV 164 (204)
T ss_dssp HHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC-EEEE
T ss_pred HHHhcCCCeEEEEEecccccHHHHHHHHHHCCC-ceeE
Confidence 445566778888887887777888888888886 4443
No 333
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=35.28 E-value=66 Score=25.05 Aligned_cols=68 Identities=9% Similarity=0.084 Sum_probs=41.5
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.++|..+-.. ..|+..|. +..+++.+.+.++...-.++..+..|.++ +++-+..++.+.+++
T Consensus 33 as~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 33 STSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK---PSEIADMMAMVADRF 102 (281)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC---HHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC---HHHHHHHHHHHHHHC
Confidence 3343333444433223 47999998 77888888888876644568888888764 233444555555554
No 334
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=35.22 E-value=3.9 Score=33.08 Aligned_cols=25 Identities=16% Similarity=0.187 Sum_probs=20.1
Q ss_pred cCCchHHHHHHHh--cCC-CcEEEEEcC
Q psy11559 80 CAPHRAAKLAAAL--MKN-TGVLFANDV 104 (189)
Q Consensus 80 AAPGgKT~~la~~--~~~-~g~v~A~D~ 104 (189)
|||||=|-.++++ ++. .|.++|.|+
T Consensus 82 aAPGGWSQvAa~~~~vg~V~G~vig~D~ 109 (269)
T 2px2_A 82 CGRGGWSYYAATMKNVQEVRGYTKGGPG 109 (269)
T ss_dssp CTTSHHHHHHTTSTTEEEEEEECCCSTT
T ss_pred CCCCHHHHHHhhhcCCCCceeEEEcccc
Confidence 9999998888887 433 588999994
No 335
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=35.17 E-value=55 Score=25.35 Aligned_cols=51 Identities=18% Similarity=0.179 Sum_probs=34.6
Q ss_pred cEEEEEcC-------------ChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDV-------------SKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~-------------~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+++|. +..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 40 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 103 (280)
T 3pgx_A 40 ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR-KALTRVLDVRD---DAALRELVADGMEQF 103 (280)
T ss_dssp CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEEcCCCC---HHHHHHHHHHHHHHc
Confidence 47999998 78888888888887774 47777888754 233344445544443
No 336
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=34.95 E-value=34 Score=31.62 Aligned_cols=46 Identities=13% Similarity=0.173 Sum_probs=31.8
Q ss_pred cCCc-hHHHHHHHhc----C-CCcEEEEEcCChHHHHHHHHHHHHhCCCeEE
Q psy11559 80 CAPH-RAAKLAAALM----K-NTGVLFANDVSKERSKAIVGNFHRLGVINSV 125 (189)
Q Consensus 80 AAPG-gKT~~la~~~----~-~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~ 125 (189)
+.|| |||+.+++++ . +...|..+=.+-.=++.|.+++.+.|+.-++
T Consensus 382 GppGTGKT~~i~~~i~~l~~~~~~~ILv~a~tn~A~d~l~~rL~~~g~~ilR 433 (802)
T 2xzl_A 382 GPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVR 433 (802)
T ss_dssp CSTTSSHHHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCeEEEEcCcHHHHHHHHHHHHhhCccEEe
Confidence 7888 9998766543 1 2345666656666778888999888875333
No 337
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=34.85 E-value=81 Score=24.79 Aligned_cols=52 Identities=15% Similarity=0.144 Sum_probs=36.0
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-.. ..|+..|.+..+++.+.+.++..|. ++.++..|.++
T Consensus 39 as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d 91 (301)
T 3tjr_A 39 GASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRH 91 (301)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 3343334444443223 4799999999999999988888775 47778888764
No 338
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=34.68 E-value=29 Score=28.35 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=22.0
Q ss_pred cCCc-hHHHHHHHhcC----------CCcEEEEEcCChH-HHHHHHHHHHHhCC
Q psy11559 80 CAPH-RAAKLAAALMK----------NTGVLFANDVSKE-RSKAIVGNFHRLGV 121 (189)
Q Consensus 80 AAPG-gKT~~la~~~~----------~~g~v~A~D~~~~-Rl~~l~~~l~r~g~ 121 (189)
..|| |||+.+.+++. ..+.++=+|.... +...+.+.++++|+
T Consensus 129 G~~GsGKTtla~~la~~~~~~~~~gg~~~~vlyi~~E~~~~~~~l~~~~~~~g~ 182 (343)
T 1v5w_A 129 GEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNV 182 (343)
T ss_dssp CCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHHHhcccccCCCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 5666 99987655432 1344444444332 23344455566665
No 339
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=34.58 E-value=85 Score=24.08 Aligned_cols=52 Identities=19% Similarity=0.196 Sum_probs=35.5
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-.. ..|++.|.++.+++.+.+.++..|. ++.++..|.++
T Consensus 39 asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~ 91 (272)
T 1yb1_A 39 AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSN 91 (272)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCC
Confidence 3444334444433223 4799999999999988888887764 57788888753
No 340
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=34.57 E-value=45 Score=26.11 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=34.8
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+..|.+..+++.+.+.+...|. ++..+..|.++ +++-++.++.+.++
T Consensus 53 ~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 53 VTVGALGRTRTEVEEVADEIVGAGG-QAIALEADVSD---ELQMRNAVRDLVLK 102 (283)
T ss_dssp CEEEEEESSHHHHHHHHHHHTTTTC-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 4899999999999988888877664 47778888754 23334444444444
No 341
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.30 E-value=91 Score=21.05 Aligned_cols=38 Identities=13% Similarity=0.103 Sum_probs=31.2
Q ss_pred HHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC
Q psy11559 85 AAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI 122 (189)
Q Consensus 85 KT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~ 122 (189)
|+.-....++.+-.|+-.|.+.+|++...+...|-|+.
T Consensus 66 kairfvkslgaqvliiiydqdqnrleefsrevrrrgfe 103 (134)
T 2l69_A 66 KAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFE 103 (134)
T ss_dssp HHHHHHHHHCCCCEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCeEEEEEEeCchhHHHHHHHHHHhcCce
Confidence 55555555566778999999999999999999999986
No 342
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=34.29 E-value=17 Score=28.05 Aligned_cols=35 Identities=9% Similarity=0.038 Sum_probs=27.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNF 116 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l 116 (189)
|++|+=|..+++. +.+.|+|+|+++.-++..+++.
T Consensus 46 cGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 46 SSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp CTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTC
T ss_pred cCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhC
Confidence 8999988888876 2348999999998777644443
No 343
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=33.65 E-value=40 Score=26.22 Aligned_cols=39 Identities=10% Similarity=0.091 Sum_probs=27.3
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGV 121 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~ 121 (189)
||.|. |.+.|..++ -..+++|+++.-++..+++++..++
T Consensus 221 ~GsGt-t~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 221 MGSGT-TAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCH-HHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCH-HHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 55553 455555553 4799999999999999999987664
No 344
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=33.45 E-value=16 Score=28.56 Aligned_cols=36 Identities=11% Similarity=0.052 Sum_probs=26.2
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFH 117 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~ 117 (189)
+|+|. +..++.... ...|+++|+|+.-++..+++++
T Consensus 80 cG~G~-~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 80 SGPTV-YQLLSACSH-FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CTTCC-GGGTTGGGG-CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCcCh-HHHHhhccC-CCeEEEeCCCHHHHHHHHHHHh
Confidence 89998 554444322 3589999999998888877654
No 345
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=33.07 E-value=59 Score=24.81 Aligned_cols=52 Identities=13% Similarity=0.014 Sum_probs=37.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..+.+....+.+.+..+..+-.++.++..|.++ +++=++.++.+.+++
T Consensus 34 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 34 ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN---DAEIETCFASIKEQV 85 (266)
T ss_dssp CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS---SHHHHHHHHHHHHHH
T ss_pred CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC---HHHHHHHHHHHHHHh
Confidence 4789999998888888888887776578888899765 334455555555543
No 346
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=32.81 E-value=96 Score=23.54 Aligned_cols=49 Identities=14% Similarity=0.194 Sum_probs=33.2
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALR 149 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~ 149 (189)
..|++.|.++.+++.+.+.++..|. ++..+..|.++ +++-+..++.+.+
T Consensus 30 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~ 78 (260)
T 2qq5_A 30 ATVYITGRHLDTLRVVAQEAQSLGG-QCVPVVCDSSQ---ESEVRSLFEQVDR 78 (260)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHSS-EEEEEECCTTS---HHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCC-ceEEEECCCCC---HHHHHHHHHHHHH
Confidence 4788999999999888888877763 57777888754 2233344444443
No 347
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=32.36 E-value=1.2e+02 Score=24.23 Aligned_cols=52 Identities=12% Similarity=0.065 Sum_probs=34.7
Q ss_pred CchHHHHHHHhcCCC-cEEEEEc-CChHHHHHHHHHHH-HhCCCeEEEEcCCCCCC
Q psy11559 82 PHRAAKLAAALMKNT-GVLFAND-VSKERSKAIVGNFH-RLGVINSVVTCLDGRQY 134 (189)
Q Consensus 82 PGgKT~~la~~~~~~-g~v~A~D-~~~~Rl~~l~~~l~-r~g~~nv~~~~~Da~~~ 134 (189)
-||=-.+++..+-.. ..|++.| .++.+++.+.+.+. +.| .++.++..|.++.
T Consensus 55 s~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 55 AKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNV 109 (328)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCc
Confidence 343333444433223 4788999 99999988888776 555 3578888898764
No 348
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=31.96 E-value=82 Score=23.38 Aligned_cols=50 Identities=18% Similarity=0.137 Sum_probs=33.5
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHH-HhCCCeEEEEcCCCCC
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFH-RLGVINSVVTCLDGRQ 133 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~-r~g~~nv~~~~~Da~~ 133 (189)
||=-.+++..+-.+ ..|+..+.+..+++.+.+.+. ..|. ++.++..|.++
T Consensus 12 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 63 (235)
T 3l77_A 12 RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVSK 63 (235)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTC
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCC-eEEEEEeccCC
Confidence 33333444443323 479999999999988888776 4553 57788888754
No 349
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=30.99 E-value=1.1e+02 Score=23.53 Aligned_cols=36 Identities=8% Similarity=0.083 Sum_probs=27.6
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
..|++.|.++.+++.+.+.++..|. ++..+..|.++
T Consensus 46 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 81 (273)
T 1ae1_A 46 ARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLS 81 (273)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 4799999999998888777777664 46777788653
No 350
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=30.40 E-value=40 Score=25.13 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=22.3
Q ss_pred cCCc-hHHHHHHHhcC----CCcE--EEEEcCChHHHHHHHHHHHHhCCC
Q psy11559 80 CAPH-RAAKLAAALMK----NTGV--LFANDVSKERSKAIVGNFHRLGVI 122 (189)
Q Consensus 80 AAPG-gKT~~la~~~~----~~g~--v~A~D~~~~Rl~~l~~~l~r~g~~ 122 (189)
+.|| |||+.+.+++. ..+. .+..|.+. ..+.+++.++|..
T Consensus 30 G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e~~~---~~~~~~~~~~g~~ 76 (247)
T 2dr3_A 30 GGPGTGKTIFSQQFLWNGLKMGEPGIYVALEEHP---VQVRQNMAQFGWD 76 (247)
T ss_dssp ECTTSSHHHHHHHHHHHHHHTTCCEEEEESSSCH---HHHHHHHHTTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCeEEEEEccCCH---HHHHHHHHHcCCC
Confidence 6667 89998655431 2223 33445443 3455566677764
No 351
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=30.36 E-value=34 Score=27.34 Aligned_cols=14 Identities=0% Similarity=-0.194 Sum_probs=9.9
Q ss_pred cCCc-hHHHHHHHhc
Q psy11559 80 CAPH-RAAKLAAALM 93 (189)
Q Consensus 80 AAPG-gKT~~la~~~ 93 (189)
+.|| |||+.+.+++
T Consensus 105 G~~gsGKT~la~~la 119 (322)
T 2i1q_A 105 GVFGSGKTQIMHQSC 119 (322)
T ss_dssp ESTTSSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
Confidence 6677 9998765543
No 352
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=30.22 E-value=48 Score=29.43 Aligned_cols=45 Identities=13% Similarity=0.205 Sum_probs=29.7
Q ss_pred cCCc-hHHHHHHHh----cC-CCcEEEEEcCChHHHHHHHHHHHHhCCCeE
Q psy11559 80 CAPH-RAAKLAAAL----MK-NTGVLFANDVSKERSKAIVGNFHRLGVINS 124 (189)
Q Consensus 80 AAPG-gKT~~la~~----~~-~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv 124 (189)
+.|| |||+.++.+ .. +...|..+=.+-.=++.|.+.+.+.|+.-+
T Consensus 202 GppGTGKT~~~~~~i~~l~~~~~~~ilv~a~tn~A~~~l~~~l~~~~~~~~ 252 (624)
T 2gk6_A 202 GPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVV 252 (624)
T ss_dssp CCTTSCHHHHHHHHHHHHHTSSSCCEEEEESSHHHHHHHHHHHHTTTCCEE
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCcHHHHHHHHHHHHhcCCeEE
Confidence 6788 999876554 22 334555555566666888888888887533
No 353
>2i0x_A Hypothetical protein PF1117; PSI, STRU genomics, southeast collaboratory for structural genomics, structure initiative, secsg; 2.70A {Pyrococcus furiosus} SCOP: d.58.58.1
Probab=30.10 E-value=24 Score=23.04 Aligned_cols=24 Identities=17% Similarity=0.111 Sum_probs=20.9
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCC
Q psy11559 98 VLFANDVSKERSKAIVGNFHRLGV 121 (189)
Q Consensus 98 ~v~A~D~~~~Rl~~l~~~l~r~g~ 121 (189)
.|++-|++.+|+..+.+.++++|.
T Consensus 3 vlv~YDI~~kR~~kv~k~l~~yg~ 26 (85)
T 2i0x_A 3 IVVVYDVGVERVNKVKKFLRMHLN 26 (85)
T ss_dssp EEEEEECCSSSHHHHHHHHTTTSE
T ss_pred EEEEeeCChHHHHHHHHHHHHhCc
Confidence 578899999999999999999984
No 354
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=29.98 E-value=59 Score=26.56 Aligned_cols=50 Identities=12% Similarity=-0.053 Sum_probs=36.4
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.||=+.-+... +-+ -.++|+|+++.-++..+.|.. +..+...|.+++.
T Consensus 10 aG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~ 60 (343)
T 1g55_A 10 SGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGIT 60 (343)
T ss_dssp CTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCC
T ss_pred cCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHcc
Confidence 8899987777654 111 279999999999999999864 2345677877653
No 355
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=29.91 E-value=1e+02 Score=23.32 Aligned_cols=52 Identities=4% Similarity=0.038 Sum_probs=33.5
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-.. ..|++.|.++.+++.+.+.++..|. ++..+..|.++
T Consensus 17 as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 69 (260)
T 2ae2_A 17 GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSS 69 (260)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-EEEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 3343333444333223 4799999999998888777776664 47777788654
No 356
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=29.79 E-value=90 Score=24.43 Aligned_cols=51 Identities=20% Similarity=0.225 Sum_probs=34.9
Q ss_pred cEEEEEcCC------------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVS------------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~------------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+++|.+ ..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 53 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 115 (299)
T 3t7c_A 53 ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRD---FDAMQAAVDDGVTQL 115 (299)
T ss_dssp CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCC---HHHHHHHHHHHHHHh
Confidence 479999987 7788888888888774 57888888764 233344455555443
No 357
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=29.79 E-value=22 Score=28.45 Aligned_cols=52 Identities=12% Similarity=-0.079 Sum_probs=33.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcC-CCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCL-DGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~-Da~~ 133 (189)
|||||=|-.++.+.+. ..|+|+|+-..-... -...+.+|-..|+.... |...
T Consensus 87 aapGGWSq~~a~~~g~-~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~ 139 (267)
T 3p8z_A 87 CGRGGWSYYCAGLKKV-TEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFY 139 (267)
T ss_dssp CTTSHHHHHHHTSTTE-EEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGG
T ss_pred CCCCcHHHHHHHhcCC-CEEEEEecCCCCccC-cchhhhcCcCceEEEeccceee
Confidence 9999987777765443 389999987653310 01123566667888777 7443
No 358
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=29.66 E-value=1.7e+02 Score=23.54 Aligned_cols=69 Identities=12% Similarity=0.017 Sum_probs=44.3
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCC--CCCcHHHHHHHHhhCCcEEEecCCCCCCCC
Q psy11559 98 VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGK--PEENEAVVNYALRKRDVKLVPTGLDFGTEG 166 (189)
Q Consensus 98 ~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~--~eENE~vV~~~L~~~~~~l~~~~~~~~~~g 166 (189)
.+.|.|.+..-++..-..++.+|++||.++.+|.....+ ...--+.|+.+-+..+|.+--...+.++|.
T Consensus 88 Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~ 158 (304)
T 3fst_A 88 HLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPE 158 (304)
T ss_dssp EEESTTSCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHCCCEEEEEECTTCCTT
T ss_pred EeecCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEEeCCCcCCC
Confidence 588889999999988888999999999999999765421 233345555432223665533333333443
No 359
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=29.49 E-value=1.2e+02 Score=22.88 Aligned_cols=53 Identities=19% Similarity=0.206 Sum_probs=35.0
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-|-||=-.+++..+-.+| .|++.+. +..+++.+.+.++..|. ++.++..|.++
T Consensus 28 GasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 82 (274)
T 1ja9_A 28 GAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISK 82 (274)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 344544445554443334 7888888 88888888888877774 46777888653
No 360
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=29.47 E-value=1.2e+02 Score=22.91 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=32.8
Q ss_pred CCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-..| .|++.|.++.+++.+.+.++..|. ++..+..|.++
T Consensus 22 as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 74 (260)
T 2zat_A 22 STDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGL-SVTGTVCHVGK 74 (260)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCC
Confidence 33433344444332233 788999999888887777777664 46667777653
No 361
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.32 E-value=93 Score=23.83 Aligned_cols=50 Identities=10% Similarity=0.068 Sum_probs=34.1
Q ss_pred cEEEEEcCC------------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVS------------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~------------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+.+|.+ ..+++.+...++..|. ++..+..|.++ +++-++.++.+.++
T Consensus 35 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~v~~~~~~~~~~ 96 (287)
T 3pxx_A 35 ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRD---RAAVSRELANAVAE 96 (287)
T ss_dssp CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCC---HHHHHHHHHHHHHH
Confidence 479999987 7888888888888774 57788888754 22333444454444
No 362
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=29.29 E-value=67 Score=21.84 Aligned_cols=47 Identities=19% Similarity=0.127 Sum_probs=29.8
Q ss_pred cCCchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
.|-|.=..+++..+...| .|+++|.++.+++.+++ .| +.++..|++.
T Consensus 12 ~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~---~~~~~gd~~~ 59 (141)
T 3llv_A 12 IGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG---FDAVIADPTD 59 (141)
T ss_dssp ECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---CEEEECCTTC
T ss_pred ECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC---CcEEECCCCC
Confidence 344544456666554444 69999999999887764 34 3455566643
No 363
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=29.28 E-value=1.2e+02 Score=22.37 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=34.3
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHH-hCCCeEEEEcCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHR-LGVINSVVTCLDGR 132 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r-~g~~nv~~~~~Da~ 132 (189)
-|-||=-.+++..+..+ ..|++.+.+..+++.+.+.+.. .|. ++.++..|.+
T Consensus 14 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~ 67 (248)
T 2pnf_A 14 GSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLL 67 (248)
T ss_dssp TCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTT
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCC
Confidence 34455445555444323 4799999999998888777765 454 4677777865
No 364
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=28.97 E-value=42 Score=25.05 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=22.7
Q ss_pred cCCc-hHHHHHHHhc-------CCCcEEEEEcCChHHHHHHHHHHHHhCC
Q psy11559 80 CAPH-RAAKLAAALM-------KNTGVLFANDVSKERSKAIVGNFHRLGV 121 (189)
Q Consensus 80 AAPG-gKT~~la~~~-------~~~g~v~A~D~~~~Rl~~l~~~l~r~g~ 121 (189)
+.|| |||+.+.+++ +..+.++..|-++.+ +.+++.+++.
T Consensus 37 G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~---~~~~~~~~~~ 83 (251)
T 2zts_A 37 GGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARD---LRREMASFGW 83 (251)
T ss_dssp CCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHH---HHHHHHTTTC
T ss_pred eCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHH---HHHHHHHcCC
Confidence 7788 9998765543 123345566766544 3445555554
No 365
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=28.80 E-value=1.9e+02 Score=21.93 Aligned_cols=48 Identities=10% Similarity=-0.024 Sum_probs=36.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCC-CeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGV-INSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~-~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|++.|.+..+++.+.+.+...+. ..+..+..|.+ +++.++.+++++
T Consensus 35 ~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-------~~~~~~~~~~~~ 83 (267)
T 3t4x_A 35 ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-------TEQGCQDVIEKY 83 (267)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT-------SHHHHHHHHHHC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC-------CHHHHHHHHHhc
Confidence 4899999999999988888887653 35677778864 456678888765
No 366
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=28.72 E-value=82 Score=24.06 Aligned_cols=66 Identities=20% Similarity=0.208 Sum_probs=40.4
Q ss_pred CchHHHHHHHhcCCCc-EEEEE-cCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 82 PHRAAKLAAALMKNTG-VLFAN-DVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A~-D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
-||=-.+++..+-..| .|+.. +.+..+++.+.+.++..|. ++.++..|.++ +++-++.++.+.+++
T Consensus 13 s~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 13 SRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANVGQ---PAKIKEMFQQIDETF 80 (258)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTC-CEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC---HHHHHHHHHHHHHHc
Confidence 3433344444433334 66665 8999999999888887775 47788888754 233344444544443
No 367
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=28.30 E-value=61 Score=25.45 Aligned_cols=49 Identities=14% Similarity=0.077 Sum_probs=33.7
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+.+|.+....+.+++..+..|- +..+..|.++ ++.-++.++.+.++
T Consensus 57 ~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~Dv~d---~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 57 AEVALTYLSETFKKRVDPLAESLGV--KLTVPCDVSD---AESVDNMFKVLAEE 105 (296)
T ss_dssp CEEEEEESSGGGHHHHHHHHHHHTC--CEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CEEEEEeCChHHHHHHHHHHHhcCC--eEEEEcCCCC---HHHHHHHHHHHHHH
Confidence 4799999998888888888777764 5677788754 23344445555544
No 368
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=28.18 E-value=1e+02 Score=23.68 Aligned_cols=64 Identities=17% Similarity=0.167 Sum_probs=39.4
Q ss_pred chHHHHHHHhcCCCc-EEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 83 HRAAKLAAALMKNTG-VLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 83 GgKT~~la~~~~~~g-~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
||=-.++|..+-..| .|+..+. +..+++.+.+.++..|. ++..+..|.++ ++.-+..++.+.++
T Consensus 38 ~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d---~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 38 RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-EAFAVKADVSQ---ESEVEALFAAVIER 103 (269)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTS---HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-cEEEEECCCCC---HHHHHHHHHHHHHH
Confidence 433334444332234 7888888 78888888888888775 47778888764 23334444555444
No 369
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=28.13 E-value=84 Score=24.28 Aligned_cols=51 Identities=16% Similarity=0.112 Sum_probs=33.6
Q ss_pred cEEEEEcCC----------------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVS----------------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~----------------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+++|.+ ..+++.+.+.++..|. ++..+..|.++ +++-++.++.+.+++
T Consensus 36 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 102 (286)
T 3uve_A 36 ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR-RIVTAEVDVRD---YDALKAAVDSGVEQL 102 (286)
T ss_dssp CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTC-CEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCC-ceEEEEcCCCC---HHHHHHHHHHHHHHh
Confidence 479999987 7777777777776664 47788888764 233344445554443
No 370
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=28.13 E-value=1e+02 Score=23.43 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=33.1
Q ss_pred CchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 82 PHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-||=-.+++..+-.. ..|++.|.+..+++.+.+.++..|. ++.++..|.++
T Consensus 16 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 67 (262)
T 1zem_A 16 GGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGV-EARSYVCDVTS 67 (262)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTS-CEEEEECCTTC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCC
Confidence 343333444433223 4788999999998888887776664 46777788653
No 371
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=27.95 E-value=1e+02 Score=23.04 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=34.7
Q ss_pred CCchHHHHHHHhcCC--CcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKN--TGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~--~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-. ...|++.+.+..+++.+.+.++..|. ++.++..|.++
T Consensus 12 asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~ 65 (276)
T 1wma_A 12 GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDD 65 (276)
T ss_dssp CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTC
T ss_pred CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCC-eeEEEECCCCC
Confidence 344444445444322 34799999999999888888877763 46777788654
No 372
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=27.91 E-value=96 Score=25.73 Aligned_cols=49 Identities=16% Similarity=-0.007 Sum_probs=36.4
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYG 135 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~ 135 (189)
|+.||=+.-+.+. + --.++|+|+++.-++..+.|. .+..+.+.|.+++.
T Consensus 10 sG~GGlslG~~~a-G-~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~ 58 (376)
T 3g7u_A 10 SGVGGLSLGAARA-G-FDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLN 58 (376)
T ss_dssp CTTSHHHHHHHHH-T-CEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCC
T ss_pred cCcCHHHHHHHHC-C-CcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcC
Confidence 8899988776654 2 225789999999999999884 34566778877653
No 373
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=27.90 E-value=1.3e+02 Score=22.63 Aligned_cols=53 Identities=6% Similarity=0.057 Sum_probs=33.8
Q ss_pred cCCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-|-||=-.+++..+-.+ ..|++.+.++.+++.+.+.++..|. ++..+..|.++
T Consensus 21 GasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 74 (266)
T 1xq1_A 21 GGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASL 74 (266)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCC
Confidence 34444444555443323 3788899999888887777776664 46677777643
No 374
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=27.62 E-value=1.4e+02 Score=22.38 Aligned_cols=51 Identities=14% Similarity=0.283 Sum_probs=32.8
Q ss_pred CchHHHHHHHhcCCCc-EEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 82 PHRAAKLAAALMKNTG-VLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
-||=-.+++..+-..| .|++.+. ++.+++.+.+.++..|. ++..+..|.++
T Consensus 13 s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 65 (246)
T 2uvd_A 13 SRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVAN 65 (246)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCC
Confidence 3433344444332234 7888888 88888888888877664 46777778653
No 375
>3oq2_A Crispr-associated protein CAS2; ferredoxin fold, immune system; HET: TRS CIT; 1.35A {Desulfovibrio vulgaris}
Probab=27.53 E-value=47 Score=22.43 Aligned_cols=23 Identities=35% Similarity=0.430 Sum_probs=20.9
Q ss_pred EEEEEcCCh------HHHHHHHHHHHHhC
Q psy11559 98 VLFANDVSK------ERSKAIVGNFHRLG 120 (189)
Q Consensus 98 ~v~A~D~~~------~Rl~~l~~~l~r~g 120 (189)
.|++.|++. +|+..+.+.++++|
T Consensus 10 vlV~YDI~~~t~~g~kr~~kv~k~l~~yG 38 (103)
T 3oq2_A 10 VLISYDVSFEDPGGQRRLRRIAKACQDYG 38 (103)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHGGGE
T ss_pred EEEEEECCCCCchhHHHHHHHHHHHHHhC
Confidence 589999997 79999999999999
No 376
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=27.43 E-value=51 Score=28.85 Aligned_cols=40 Identities=8% Similarity=0.082 Sum_probs=28.7
Q ss_pred cCCc-hHHHHHHHh----cCC----CcEEEEEcCChHHHHHHHHHHHHh
Q psy11559 80 CAPH-RAAKLAAAL----MKN----TGVLFANDVSKERSKAIVGNFHRL 119 (189)
Q Consensus 80 AAPG-gKT~~la~~----~~~----~g~v~A~D~~~~Rl~~l~~~l~r~ 119 (189)
|+|| |||+.|... +.. ...|.++=.+..=...+++++.++
T Consensus 29 a~aGsGKT~~l~~ri~~l~~~~~~~~~~iL~ltft~~aa~e~~~rl~~~ 77 (647)
T 3lfu_A 29 AGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQL 77 (647)
T ss_dssp ECTTSCHHHHHHHHHHHHHHTSCCCGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCChhhEEEEeccHHHHHHHHHHHHHH
Confidence 8999 999987653 222 246777777777778888888765
No 377
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.31 E-value=1.1e+02 Score=23.51 Aligned_cols=50 Identities=18% Similarity=0.167 Sum_probs=33.0
Q ss_pred cEEEEEcC-------------ChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDV-------------SKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~-------------~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+++|. +..+++.+.+.++..|. .+..+..|.++ +++=++.++.+.++
T Consensus 36 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~v~~~~~~~~~~ 98 (277)
T 3tsc_A 36 ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRD---FDRLRKVVDDGVAA 98 (277)
T ss_dssp CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCC---HHHHHHHHHHHHHH
Confidence 47999998 67788888777777764 47778888754 22333444444444
No 378
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=27.09 E-value=60 Score=22.78 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=18.8
Q ss_pred HhcCCCcEEEEEcCChHHHHHHHHHHHHhCC
Q psy11559 91 ALMKNTGVLFANDVSKERSKAIVGNFHRLGV 121 (189)
Q Consensus 91 ~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~ 121 (189)
..+.+.|.++..+.+......+.+.+++.|+
T Consensus 122 ~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 122 DKLKPGGRIIVTAILLETKFEAMECLRDLGF 152 (192)
T ss_dssp HTEEEEEEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred HhcCCCcEEEEEecCcchHHHHHHHHHHCCC
Confidence 3344556666666666666666666666665
No 379
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=27.04 E-value=1.9e+02 Score=21.26 Aligned_cols=51 Identities=14% Similarity=0.156 Sum_probs=32.8
Q ss_pred CchHHHHHHHhcCCCc-EEEEE-cCChHHHHHHHHHHHHhCCCeEEE-EcCCCCC
Q psy11559 82 PHRAAKLAAALMKNTG-VLFAN-DVSKERSKAIVGNFHRLGVINSVV-TCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A~-D~~~~Rl~~l~~~l~r~g~~nv~~-~~~Da~~ 133 (189)
-||=-.+++..+-..| .|++. +.++.+++.+.+.++..|.. +.. +..|.++
T Consensus 10 sggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 63 (245)
T 2ph3_A 10 SRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-LVAVLGANLLE 63 (245)
T ss_dssp TSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS-CEEEEECCTTS
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEeccCCC
Confidence 3444445555443344 67777 88998888888877777654 344 6777653
No 380
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=26.97 E-value=1.1e+02 Score=22.85 Aligned_cols=52 Identities=10% Similarity=0.065 Sum_probs=34.0
Q ss_pred CCchHHHHHHHhcCCCc-EEEEEcCC-hHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNTG-VLFANDVS-KERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~g-~v~A~D~~-~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+..+| .|++.|.+ +.+++.+.+.++..|. ++.++..|.++
T Consensus 15 asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 68 (258)
T 3afn_B 15 SSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGG-DAAFFAADLAT 68 (258)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 34444444554443334 78889998 8888888777776663 57778888654
No 381
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=26.70 E-value=1.4e+02 Score=21.97 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=39.6
Q ss_pred CchHHHHHHHhcCCCc-EEEE-EcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 82 PHRAAKLAAALMKNTG-VLFA-NDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A-~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
-||=-.+++..+-.+| .|++ .+.++.+++.+.+.++..|. ++.++..|.++ +++-+..++.+.+++
T Consensus 10 sggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~---~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 10 SRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGG-QAITFGGDVSK---EADVEAMMKTAIDAW 77 (244)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTC-EEEEEECCTTS---HHHHHHHHHHHHHHS
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEeCCCCC---HHHHHHHHHHHHHHc
Confidence 3443344544443334 6777 48899999888888887774 57778888754 223334444444443
No 382
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=26.65 E-value=1.5e+02 Score=22.26 Aligned_cols=52 Identities=10% Similarity=0.133 Sum_probs=33.0
Q ss_pred CCchHHHHHHHhcCC-CcEEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKN-TGVLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~-~g~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-. ...|++.+. +..+++.+.+.++..+. ++.++..|.++
T Consensus 15 asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~ 68 (261)
T 1gee_A 15 SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGG-EAIAVKGDVTV 68 (261)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-EEEEEECCTTS
T ss_pred CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 334433444443322 347888898 88888888777777663 46777778653
No 383
>1zpw_X Hypothetical protein TT1823; hyphotetical protein, structural genom NPPSFA, national project on protein structural and function analyses; 1.64A {Thermus thermophilus} SCOP: d.58.58.1
Probab=26.64 E-value=44 Score=21.92 Aligned_cols=24 Identities=17% Similarity=0.241 Sum_probs=21.1
Q ss_pred EEEEEcCCh-HHHHHHHHHHHHhCC
Q psy11559 98 VLFANDVSK-ERSKAIVGNFHRLGV 121 (189)
Q Consensus 98 ~v~A~D~~~-~Rl~~l~~~l~r~g~ 121 (189)
.+++-|++. +|...+.+.++++|.
T Consensus 6 ~lV~YDI~~~kr~~kv~k~l~~yg~ 30 (90)
T 1zpw_X 6 YAVAYDIPDDTRRVKLANLLKSYGE 30 (90)
T ss_dssp EEEEEECCCHHHHHHHHHHHHTTEE
T ss_pred EEEEEeCCChHHHHHHHHHHHHhCc
Confidence 689999975 899999999999993
No 384
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=26.45 E-value=50 Score=25.41 Aligned_cols=18 Identities=11% Similarity=0.146 Sum_probs=9.4
Q ss_pred HHHHHHHHhhCCcEEEec
Q psy11559 141 EAVVNYALRKRDVKLVPT 158 (189)
Q Consensus 141 E~vV~~~L~~~~~~l~~~ 158 (189)
.+.+...+++++|+++..
T Consensus 224 ~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 224 APLVREAMAGAGFRPLEE 241 (254)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 444555555555655543
No 385
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=26.38 E-value=66 Score=25.67 Aligned_cols=39 Identities=13% Similarity=0.066 Sum_probs=25.7
Q ss_pred cCCch-HHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCe
Q psy11559 80 CAPHR-AAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVIN 123 (189)
Q Consensus 80 AAPGg-KT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~n 123 (189)
|+++| -+.++|..+. ..+|++.|.++.|++. ++++|...
T Consensus 172 aG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~----~~~~Ga~~ 211 (348)
T 4eez_A 172 AGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNL----AKKIGADV 211 (348)
T ss_dssp CSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHH----HHHTTCSE
T ss_pred CCCccHHHHHHHHHhC-CCEEEEEECcHHHhhh----hhhcCCeE
Confidence 55543 3445554443 3689999999999765 45678764
No 386
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=26.19 E-value=1.5e+02 Score=22.55 Aligned_cols=52 Identities=17% Similarity=0.078 Sum_probs=32.8
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHh--CCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRL--GVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~--g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-.. ..|++.|.++.+++.+.+.+... |. ++..+..|.++
T Consensus 21 as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 75 (267)
T 1iy8_A 21 GGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA-EVLTTVADVSD 75 (267)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTC-CEEEEECCTTS
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCc-eEEEEEccCCC
Confidence 3343333444333223 47899999999888887777665 43 46777788654
No 387
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=26.05 E-value=72 Score=28.30 Aligned_cols=45 Identities=9% Similarity=-0.017 Sum_probs=29.9
Q ss_pred cCCc-hHHHHHHHhc----CCCcEEEEEcCChHHHHHHHHHHHHhCCCeE
Q psy11559 80 CAPH-RAAKLAAALM----KNTGVLFANDVSKERSKAIVGNFHRLGVINS 124 (189)
Q Consensus 80 AAPG-gKT~~la~~~----~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv 124 (189)
.-|| |||+-+++++ .....|.++=.+-.=+..+.+++...+..-+
T Consensus 212 GPPGTGKT~ti~~~I~~l~~~~~~ILv~a~TN~AvD~i~erL~~~~~~il 261 (646)
T 4b3f_X 212 GPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRIL 261 (646)
T ss_dssp CCTTSCHHHHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCeEEEEcCchHHHHHHHHHHHhcCCceE
Confidence 3488 9998776554 3334566665666667788888888776533
No 388
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=25.91 E-value=1.2e+02 Score=24.07 Aligned_cols=50 Identities=26% Similarity=0.209 Sum_probs=33.5
Q ss_pred cEEEEEcCC------------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVS------------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~------------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+++|.+ ..+++.+.+.++..|. ++..+..|.++ +++=+++++.+.++
T Consensus 71 ~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~ 132 (317)
T 3oec_A 71 ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRD---LASLQAVVDEALAE 132 (317)
T ss_dssp CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCC---HHHHHHHHHHHHHH
Confidence 478999886 7788887777777775 47788888754 23334445555444
No 389
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=25.56 E-value=1.6e+02 Score=22.25 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=32.3
Q ss_pred CchHHHHHHHhcCCCc-EEEEEcCChHHHHHHHHHHHHh-CCCeEEEEcCCCCC
Q psy11559 82 PHRAAKLAAALMKNTG-VLFANDVSKERSKAIVGNFHRL-GVINSVVTCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A~D~~~~Rl~~l~~~l~r~-g~~nv~~~~~Da~~ 133 (189)
-||=-.+++..+-.+| .|++.|.++.+++.+.+.++.. |. ++..+..|.++
T Consensus 16 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~ 68 (263)
T 3ai3_A 16 SSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVAT 68 (263)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTS
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCC
Confidence 3443344444332234 7899999998888777777654 53 46777778654
No 390
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=25.08 E-value=1.3e+02 Score=22.62 Aligned_cols=60 Identities=22% Similarity=0.297 Sum_probs=36.8
Q ss_pred HHHHHhcCCCc-EEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 87 KLAAALMKNTG-VLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 87 ~~la~~~~~~g-~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
.+++..+-.+| .|+..|. +..+++.+.+.++..|. ++..+..|.++ +++=++.++.+.++
T Consensus 18 ~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 18 RSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVAD---ADEVKAMIKEVVSQ 79 (246)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCC---HHHHHHHHHHHHHH
Confidence 34444332234 6777776 66888888888888875 46777888754 22333444444444
No 391
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=25.00 E-value=90 Score=19.85 Aligned_cols=27 Identities=22% Similarity=0.236 Sum_probs=23.2
Q ss_pred EEEEEcCChHHHHHHHHHHHHhCCCeE
Q psy11559 98 VLFANDVSKERSKAIVGNFHRLGVINS 124 (189)
Q Consensus 98 ~v~A~D~~~~Rl~~l~~~l~r~g~~nv 124 (189)
.|+|.|.++.....+...++..++.-+
T Consensus 31 ViiA~D~~~~~~~~i~~lc~~~~Ip~~ 57 (82)
T 3v7e_A 31 VVVAKDADPILTSSVVSLAEDQGISVS 57 (82)
T ss_dssp EEEETTSCHHHHHHHHHHHHHHTCCEE
T ss_pred EEEeCCCCHHHHHHHHHHHHHcCCCEE
Confidence 588999999888999999999998743
No 392
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=24.96 E-value=67 Score=29.67 Aligned_cols=43 Identities=14% Similarity=0.257 Sum_probs=29.1
Q ss_pred cCCc-hHHHHHHHhc----C-CCcEEEEEcCChHHHHHHHHHHHHhCCC
Q psy11559 80 CAPH-RAAKLAAALM----K-NTGVLFANDVSKERSKAIVGNFHRLGVI 122 (189)
Q Consensus 80 AAPG-gKT~~la~~~----~-~~g~v~A~D~~~~Rl~~l~~~l~r~g~~ 122 (189)
+.|| |||+.++.++ . ....|..+=.+-.=++.|.+.+.+.|+.
T Consensus 378 GppGTGKT~ti~~~i~~l~~~~~~~ilv~a~tn~A~~~l~~~l~~~g~~ 426 (800)
T 2wjy_A 378 GPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLK 426 (800)
T ss_dssp CCTTSCHHHHHHHHHHHHHTTCSSCEEEEESSHHHHHHHHHHHHTTTCC
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCCcEEEEcCcHHHHHHHHHHHHHhCcc
Confidence 7788 9998765442 2 3345655555666667888888888875
No 393
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=24.80 E-value=1.2e+02 Score=23.41 Aligned_cols=52 Identities=13% Similarity=0.027 Sum_probs=33.8
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHh-CCCeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRL-GVINSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~-g~~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+... ..|++.|.+..+++.+.+.++.. |. ++.++..|.++
T Consensus 34 asggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~ 87 (302)
T 1w6u_A 34 GGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRD 87 (302)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSS-CEEEEECCTTC
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCC
Confidence 3444444444443323 47999999999888777777655 53 57778888754
No 394
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=24.65 E-value=1.6e+02 Score=22.45 Aligned_cols=51 Identities=10% Similarity=0.055 Sum_probs=32.0
Q ss_pred CchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHH-HHhCCCeEEEEcCCCCC
Q psy11559 82 PHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNF-HRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l-~r~g~~nv~~~~~Da~~ 133 (189)
-||=-.+++..+-.. ..|++.+.++.+++.+.+.+ +..|. ++..+..|.++
T Consensus 30 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~ 82 (267)
T 1vl8_A 30 SRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSN 82 (267)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTC
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCC
Confidence 343333444333223 47999999999888877777 55564 46677778654
No 395
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19
Probab=24.29 E-value=58 Score=28.94 Aligned_cols=40 Identities=3% Similarity=0.096 Sum_probs=28.8
Q ss_pred cCCc-hHHHHHHHhc----C----CCcEEEEEcCChHHHHHHHHHHHHh
Q psy11559 80 CAPH-RAAKLAAALM----K----NTGVLFANDVSKERSKAIVGNFHRL 119 (189)
Q Consensus 80 AAPG-gKT~~la~~~----~----~~g~v~A~D~~~~Rl~~l~~~l~r~ 119 (189)
|+|| |||+.|.+.+ . +...|.++=...+-...|++++.++
T Consensus 22 AgaGSGKT~~l~~ri~~ll~~~~~~~~~IL~lTfT~~Aa~em~~Rl~~~ 70 (673)
T 1uaa_A 22 AGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQT 70 (673)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHHHHHHHHHHH
T ss_pred eCCCCChHHHHHHHHHHHHHhcCCCHHHeEEEeccHHHHHHHHHHHHHH
Confidence 8888 9998876532 1 2346888877777778888888764
No 396
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=23.80 E-value=1.4e+02 Score=22.59 Aligned_cols=64 Identities=11% Similarity=0.181 Sum_probs=37.1
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
|-||=-.+++..+-.+ ..|+..|.+..+++.+.+.+ +- ++..+..|.++ +++-+..++.+.+++
T Consensus 16 as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~---~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 16 SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GP-AAYAVQMDVTR---QDSIDAAIAATVEHA 80 (259)
T ss_dssp CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CT-TEEEEECCTTC---HHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-CceEEEeeCCC---HHHHHHHHHHHHHHc
Confidence 3344334444443223 47999999988877665544 43 46777888754 233344555555554
No 397
>3vkw_A Replicase large subunit; alpha/beta domain, helicase, transferase; 1.90A {Tomato mosaic virus}
Probab=23.77 E-value=57 Score=28.12 Aligned_cols=40 Identities=13% Similarity=-0.004 Sum_probs=24.5
Q ss_pred cCCc-hHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC
Q psy11559 80 CAPH-RAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG 120 (189)
Q Consensus 80 AAPG-gKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g 120 (189)
++|| |||+.|.+.+.....++..=-.+.+ ..+++.+.+.|
T Consensus 168 G~aGsGKTt~I~~~~~~~~~lVlTpT~~aa-~~l~~kl~~~~ 208 (446)
T 3vkw_A 168 GVPGCGKTKEILSRVNFEEDLILVPGRQAA-EMIRRRANASG 208 (446)
T ss_dssp ECTTSCHHHHHHHHCCTTTCEEEESCHHHH-HHHHHHHTTTS
T ss_pred cCCCCCHHHHHHHHhccCCeEEEeCCHHHH-HHHHHHhhhcC
Confidence 6677 9999999988644445444333333 55555555433
No 398
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=23.62 E-value=2.3e+02 Score=21.18 Aligned_cols=51 Identities=8% Similarity=0.064 Sum_probs=33.8
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCcHHHHHHHHh
Q psy11559 96 TGVLFANDVSKERSKAIVGNFHRLG-VINSVVTCLDGRQYGKPEENEAVVNYALR 149 (189)
Q Consensus 96 ~g~v~A~D~~~~Rl~~l~~~l~r~g-~~nv~~~~~Da~~~~~~eENE~vV~~~L~ 149 (189)
...|++.|.++.+++.+.+.++... -.++.++..|.++ +++=+..++.+.+
T Consensus 33 G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 33 GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT---EAGVQRLLSAVRE 84 (259)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS---HHHHHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC---HHHHHHHHHHHHh
Confidence 3479999999999988888877652 1357788888764 2233344444444
No 399
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=23.61 E-value=2.2e+02 Score=23.33 Aligned_cols=54 Identities=11% Similarity=-0.012 Sum_probs=38.1
Q ss_pred cCCchHHHHHHHhcCCCc--EEEEEcCChHHHHHHHHHHHHhCC---CeEEEEcCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTG--VLFANDVSKERSKAIVGNFHRLGV---INSVVTCLDGRQ 133 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g--~v~A~D~~~~Rl~~l~~~l~r~g~---~nv~~~~~Da~~ 133 (189)
-|-|+=-.+++..+-..| .|++.|.++.++..+.+.+....- .++.++.+|.++
T Consensus 42 GatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d 100 (399)
T 3nzo_A 42 GGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGS 100 (399)
T ss_dssp TTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTS
T ss_pred cCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCC
Confidence 455655566666554455 899999999999888887766422 367888888654
No 400
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.51 E-value=1.4e+02 Score=22.85 Aligned_cols=50 Identities=14% Similarity=0.085 Sum_probs=33.2
Q ss_pred cEEEEEcCC------------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVS------------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~------------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|+..|.+ ..+++.+.+.++..|. ++..+..|.++ +++-+..++.+.++
T Consensus 35 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~ 96 (281)
T 3s55_A 35 ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKD---RAALESFVAEAEDT 96 (281)
T ss_dssp CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCC---HHHHHHHHHHHHHh
Confidence 478999987 6777777777777774 47788888754 23334444444444
No 401
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=23.41 E-value=1.1e+02 Score=24.28 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=39.5
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCC----------hHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVS----------KERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~----------~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
||=-.++|..+-.. ..|++.|.+ ..+++.+.+.+...|. ++..+..|.++ +++-++.++.+.++
T Consensus 37 ~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d---~~~v~~~~~~~~~~ 111 (322)
T 3qlj_A 37 GGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGG-EAVADGSNVAD---WDQAAGLIQTAVET 111 (322)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTC-EEEEECCCTTS---HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCC-cEEEEECCCCC---HHHHHHHHHHHHHH
Confidence 33333444433223 489999988 7888888888888774 57778888654 22333444444444
No 402
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=23.29 E-value=1.4e+02 Score=24.14 Aligned_cols=73 Identities=11% Similarity=-0.002 Sum_probs=35.7
Q ss_pred hHHHHHHHhcC----CCcEEEEEcCChHHHHHHHHHHHHhC----CCeEEEE-cCCCCCCCCCCCc-HHHHHHHHhhC-C
Q psy11559 84 RAAKLAAALMK----NTGVLFANDVSKERSKAIVGNFHRLG----VINSVVT-CLDGRQYGKPEEN-EAVVNYALRKR-D 152 (189)
Q Consensus 84 gKT~~la~~~~----~~g~v~A~D~~~~Rl~~l~~~l~r~g----~~nv~~~-~~Da~~~~~~eEN-E~vV~~~L~~~-~ 152 (189)
||||.++.+.. ..++|.-+|.+..|....+ .+..++ ..++.++ ..+. ... |.+. .+.+...+++. |
T Consensus 117 GKTT~~~~LA~~l~~~g~kVllid~D~~r~~a~~-ql~~~~~~~~~~~l~vip~~~~-~~~-p~~~~~~~l~~~~~~~yD 193 (320)
T 1zu4_A 117 GKTTSLAKMANYYAELGYKVLIAAADTFRAGATQ-QLEEWIKTRLNNKVDLVKANKL-NAD-PASVVFDAIKKAKEQNYD 193 (320)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEEECCCSCHHHHH-HHHHHHTTTSCTTEEEECCSST-TCC-HHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHH-HHHHHHhccccCCceEEeCCCC-CCC-HHHHHHHHHHHHHhcCCC
Confidence 89987655431 3466777777766654322 223332 2345555 3321 111 1110 12233334444 9
Q ss_pred cEEEecC
Q psy11559 153 VKLVPTG 159 (189)
Q Consensus 153 ~~l~~~~ 159 (189)
+.++|.+
T Consensus 194 ~VIIDTp 200 (320)
T 1zu4_A 194 LLLIDTA 200 (320)
T ss_dssp EEEEECC
T ss_pred EEEEcCC
Confidence 9999864
No 403
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=22.89 E-value=1.8e+02 Score=24.18 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=32.8
Q ss_pred chHHHHHHHhcCCCc----EEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCC
Q psy11559 83 HRAAKLAAALMKNTG----VLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGR 132 (189)
Q Consensus 83 GgKT~~la~~~~~~g----~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~ 132 (189)
||=...++..+...| .|+..|.+..|++.+.+.+...+-.++.....|.+
T Consensus 10 GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~ 63 (405)
T 4ina_A 10 GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDAD 63 (405)
T ss_dssp SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTT
T ss_pred CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCC
Confidence 554455555443333 89999999999998888776543234556666654
No 404
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=22.89 E-value=1.6e+02 Score=20.35 Aligned_cols=35 Identities=9% Similarity=0.172 Sum_probs=27.6
Q ss_pred cCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEE
Q psy11559 93 MKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVT 127 (189)
Q Consensus 93 ~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~ 127 (189)
+.....|+..+-+..|.......|+++|.+||.++
T Consensus 53 l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l 87 (141)
T 3ilm_A 53 LEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSEL 87 (141)
T ss_dssp SCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEEC
T ss_pred CCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEe
Confidence 34445677777788999999999999999987653
No 405
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=22.87 E-value=1.3e+02 Score=23.19 Aligned_cols=49 Identities=10% Similarity=0.032 Sum_probs=36.0
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALR 149 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~ 149 (189)
..|+..|.++.+++.+.+.+...|. ++..+..|.++ ++.-++.++.+.+
T Consensus 58 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~~~~~~~~~~~ 106 (275)
T 4imr_A 58 AHVILHGVKPGSTAAVQQRIIASGG-TAQELAGDLSE---AGAGTDLIERAEA 106 (275)
T ss_dssp CEEEEEESSTTTTHHHHHHHHHTTC-CEEEEECCTTS---TTHHHHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEecCCC---HHHHHHHHHHHHH
Confidence 4899999999999999888888774 47788888765 3444555555444
No 406
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=22.79 E-value=1.5e+02 Score=20.49 Aligned_cols=35 Identities=23% Similarity=0.168 Sum_probs=28.1
Q ss_pred HHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCC
Q psy11559 88 LAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVI 122 (189)
Q Consensus 88 ~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~ 122 (189)
.+...+.+.|.++..+.+......+.+.+++.|..
T Consensus 112 ~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~ 146 (178)
T 3hm2_A 112 AAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGT 146 (178)
T ss_dssp HHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCE
T ss_pred HHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCe
Confidence 45566777889888888888888888888888864
No 407
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=22.51 E-value=72 Score=24.05 Aligned_cols=53 Identities=13% Similarity=0.084 Sum_probs=28.4
Q ss_pred CCchHHHHHHHhcCCC-cEEEEEcCChHHHHHHHHHHHHhCC------CeEEEEcCCCCC
Q psy11559 81 APHRAAKLAAALMKNT-GVLFANDVSKERSKAIVGNFHRLGV------INSVVTCLDGRQ 133 (189)
Q Consensus 81 APGgKT~~la~~~~~~-g~v~A~D~~~~Rl~~l~~~l~r~g~------~nv~~~~~Da~~ 133 (189)
|-||=-.+++..+-.. ..|++.|.+..+++.+.+.++..|. .++.++..|.++
T Consensus 15 asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 74 (264)
T 2pd6_A 15 AGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSE 74 (264)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTS
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCC
Confidence 3343334444433223 4788889888888777666555441 246667777653
No 408
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=22.51 E-value=45 Score=24.97 Aligned_cols=45 Identities=7% Similarity=0.016 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCCeEEEEcCCCCCC-CCC---CCcHHHHHHHHhhC-Cc
Q psy11559 109 SKAIVGNFHRLGVINSVVTCLDGRQY-GKP---EENEAVVNYALRKR-DV 153 (189)
Q Consensus 109 l~~l~~~l~r~g~~nv~~~~~Da~~~-~~~---eENE~vV~~~L~~~-~~ 153 (189)
...|++.++.+|+.+|+++...|--+ ..+ ++=+..|+.+|+++ +|
T Consensus 24 MadLr~~l~~lGf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~fg~ 73 (183)
T 2hiy_A 24 MAELRQELTNLGLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHYPF 73 (183)
T ss_dssp HHHHHHHHHHHTCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhcCC
Confidence 67888889999998888877665432 112 22245566666654 44
No 409
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=22.38 E-value=80 Score=23.73 Aligned_cols=44 Identities=11% Similarity=0.123 Sum_probs=30.7
Q ss_pred HHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhC--CCeEEEEcCC
Q psy11559 87 KLAAALMKNTGVLFANDVSKERSKAIVGNFHRLG--VINSVVTCLD 130 (189)
Q Consensus 87 ~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g--~~nv~~~~~D 130 (189)
..+...+.+.|.++...........+.+.+++.| +..+.+...-
T Consensus 178 ~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~ 223 (255)
T 3mb5_A 178 EHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVL 223 (255)
T ss_dssp HHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCC
T ss_pred HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEe
Confidence 3455566667788877777777777888888887 7666665543
No 410
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.32 E-value=1.9e+02 Score=21.87 Aligned_cols=51 Identities=12% Similarity=0.039 Sum_probs=33.5
Q ss_pred CchHHHHHHHhcCCC-cEEEEEcC-ChHHHHHHHHHHHHh-CCCeEEEEcCCCCC
Q psy11559 82 PHRAAKLAAALMKNT-GVLFANDV-SKERSKAIVGNFHRL-GVINSVVTCLDGRQ 133 (189)
Q Consensus 82 PGgKT~~la~~~~~~-g~v~A~D~-~~~Rl~~l~~~l~r~-g~~nv~~~~~Da~~ 133 (189)
-||=-.+++..+-.. ..|++.|. ++.+++.+.+.++.. | .++.++..|.++
T Consensus 20 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~ 73 (276)
T 1mxh_A 20 ARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSL 73 (276)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCC
Confidence 343333444333223 47999999 998888888877766 5 357778888765
No 411
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=22.22 E-value=87 Score=24.38 Aligned_cols=36 Identities=6% Similarity=-0.027 Sum_probs=27.5
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
..|++.|.+..+++.+.+.++..|. ++..+..|.++
T Consensus 33 ~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~ 68 (280)
T 3tox_A 33 AKVVVTARNGNALAELTDEIAGGGG-EAAALAGDVGD 68 (280)
T ss_dssp CEEEECCSCHHHHHHHHHHHTTTTC-CEEECCCCTTC
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCC-cEEEEECCCCC
Confidence 4799999999999888887766553 47777778654
No 412
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.89 E-value=1.3e+02 Score=22.83 Aligned_cols=48 Identities=13% Similarity=-0.012 Sum_probs=31.4
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+..|.++.+++.+.+.+ | .++..+..|.++ +++-+..++.+.+++
T Consensus 33 ~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 33 AEVLLTGRNESNIARIREEF---G-PRVHALRSDIAD---LNEIAVLGAAAGQTL 80 (255)
T ss_dssp CEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCC---HHHHHHHHHHHHHHh
Confidence 48999999998887776654 4 357788888754 233344445554443
No 413
>3o5v_A X-Pro dipeptidase; creatinase, N-terminal, PSI, MCSG, structural G midwest center for structural genomics; 1.85A {Streptococcus pyogenes m1 gas}
Probab=21.22 E-value=77 Score=21.51 Aligned_cols=22 Identities=14% Similarity=0.111 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHHHHhCCCeEEE
Q psy11559 105 SKERSKAIVGNFHRLGVINSVV 126 (189)
Q Consensus 105 ~~~Rl~~l~~~l~r~g~~nv~~ 126 (189)
|..|++.+++.+++.|++-+.+
T Consensus 1 ~~~Rl~~l~~~m~~~glDa~li 22 (132)
T 3o5v_A 1 SNAKLDQIRLYLDQKGAELAIF 22 (132)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEE
T ss_pred ChHHHHHHHHHHHHCCCCEEEE
Confidence 4579999999999999875444
No 414
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.12 E-value=1.2e+02 Score=22.97 Aligned_cols=51 Identities=20% Similarity=0.200 Sum_probs=34.1
Q ss_pred cEEEEE-cCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhhC
Q psy11559 97 GVLFAN-DVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRKR 151 (189)
Q Consensus 97 g~v~A~-D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~~ 151 (189)
..|+.. +.+..+++.+.+.++..|. ++..+..|.++ +++-+..++.+.+++
T Consensus 33 ~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~---~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 33 ANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTN---AAEVEAAISAAADKF 84 (259)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTC---HHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCC---HHHHHHHHHHHHHHh
Confidence 366666 8888888888888887774 46777888754 234445555555554
No 415
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=21.00 E-value=1.4e+02 Score=22.72 Aligned_cols=65 Identities=9% Similarity=0.040 Sum_probs=37.4
Q ss_pred CchHHHHHHHhcCCCc-EEEEEc-CChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 82 PHRAAKLAAALMKNTG-VLFAND-VSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 82 PGgKT~~la~~~~~~g-~v~A~D-~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
-||=-.+++..+-..| .|++.+ .+..+++.+...+...|. ++.++..|.++ +++-+..++.+.++
T Consensus 34 s~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~---~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 34 MGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGR-DFKAYAVDVAD---FESCERCAEKVLAD 100 (269)
T ss_dssp TSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTC-CCEEEECCTTC---HHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-ceEEEEecCCC---HHHHHHHHHHHHHH
Confidence 3433344444443344 688887 666677766666666553 47788888754 23334445555544
No 416
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=20.96 E-value=33 Score=28.31 Aligned_cols=27 Identities=7% Similarity=-0.057 Sum_probs=20.8
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChH
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKE 107 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~ 107 (189)
|||||=|-.++.+-+. ..|+|+|+-..
T Consensus 103 aapGGwsq~~~~~~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 103 CGRGGWCYYMATQKRV-QEVRGYTKGGP 129 (321)
T ss_dssp CTTCHHHHHHTTCTTE-EEEEEECCCST
T ss_pred CCCCcHHHHHHhhcCC-CEEEEEEcCCC
Confidence 9999987767665432 37999999876
No 417
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=20.81 E-value=3.3e+02 Score=21.82 Aligned_cols=53 Identities=13% Similarity=-0.134 Sum_probs=38.1
Q ss_pred cCCchHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCC
Q psy11559 80 CAPHRAAKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQY 134 (189)
Q Consensus 80 AAPGgKT~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~ 134 (189)
++.|.-+..+++... ..+++..|. +.=++..++++..-+..+|.+..+|..+.
T Consensus 188 gG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~ 240 (353)
T 4a6d_A 188 GGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD 240 (353)
T ss_dssp CTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS
T ss_pred CCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC
Confidence 888888888888754 457888887 55566666666555667899999998653
No 418
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=20.48 E-value=1.7e+02 Score=23.20 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=25.0
Q ss_pred HHHHHHhcCCCcEEEEEcCChHHHHHHHHHHHHhCCCeE
Q psy11559 86 AKLAAALMKNTGVLFANDVSKERSKAIVGNFHRLGVINS 124 (189)
Q Consensus 86 T~~la~~~~~~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv 124 (189)
+.++|..++ ..+|++.|.++.|++.++ ++|.+.+
T Consensus 187 a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~~ 220 (345)
T 3jv7_A 187 GIQILRAVS-AARVIAVDLDDDRLALAR----EVGADAA 220 (345)
T ss_dssp HHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSEE
T ss_pred HHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCEE
Confidence 456666653 358999999999998764 5888753
No 419
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=20.36 E-value=1.8e+02 Score=19.61 Aligned_cols=33 Identities=9% Similarity=-0.065 Sum_probs=27.2
Q ss_pred CcEEEEEcCChHHHHHHHHHHHHhCCCeEEEEc
Q psy11559 96 TGVLFANDVSKERSKAIVGNFHRLGVINSVVTC 128 (189)
Q Consensus 96 ~g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~ 128 (189)
...|+..+-+-.|....-..|+.+|..||.++.
T Consensus 86 ~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~ 118 (139)
T 2hhg_A 86 DKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIE 118 (139)
T ss_dssp SSEEEEECSSSHHHHHHHHHHHHHTCCSEEEET
T ss_pred CCeEEEECCCChHHHHHHHHHHHcCCCCeEEec
Confidence 456787888889999999999999999877653
No 420
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=20.34 E-value=2.1e+02 Score=21.51 Aligned_cols=50 Identities=10% Similarity=0.053 Sum_probs=30.6
Q ss_pred chHHHHHHHhcCCC-cEEEEEcCChHH-HHHHHHHHHHh-CCCeEEEEcCCCCC
Q psy11559 83 HRAAKLAAALMKNT-GVLFANDVSKER-SKAIVGNFHRL-GVINSVVTCLDGRQ 133 (189)
Q Consensus 83 GgKT~~la~~~~~~-g~v~A~D~~~~R-l~~l~~~l~r~-g~~nv~~~~~Da~~ 133 (189)
||=-.+++..+-.. ..|++.|.+..+ ++.+.+.+... |. ++..+..|.++
T Consensus 14 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 66 (260)
T 1x1t_A 14 SGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSK 66 (260)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTS
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCC
Confidence 33333444333223 378888998887 77777766654 53 46777777653
No 421
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=20.22 E-value=1e+02 Score=23.78 Aligned_cols=47 Identities=11% Similarity=0.093 Sum_probs=30.0
Q ss_pred cEEEEEcCChHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 97 GVLFANDVSKERSKAIVGNFHRLGVINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 97 g~v~A~D~~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
..|++.|.+..+++.+.+.+ + .++..+..|.++ +++=++.++.+.++
T Consensus 53 ~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d---~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 53 YGVALAGRRLDALQETAAEI---G-DDALCVPTDVTD---PDSVRALFTATVEK 99 (272)
T ss_dssp CEEEEEESCHHHHHHHHHHH---T-SCCEEEECCTTS---HHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHh---C-CCeEEEEecCCC---HHHHHHHHHHHHHH
Confidence 47999999988877666554 4 457778888754 22333444444444
No 422
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=20.20 E-value=1.2e+02 Score=23.67 Aligned_cols=50 Identities=14% Similarity=0.048 Sum_probs=34.8
Q ss_pred EEEEEcCChHHHHHHHHHHHHhC-CCeEEEEcCCCCCCCCCCCcHHHHHHHHhh
Q psy11559 98 VLFANDVSKERSKAIVGNFHRLG-VINSVVTCLDGRQYGKPEENEAVVNYALRK 150 (189)
Q Consensus 98 ~v~A~D~~~~Rl~~l~~~l~r~g-~~nv~~~~~Da~~~~~~eENE~vV~~~L~~ 150 (189)
.|+..+.+..+++.+.+.++..+ -.++.++..|.++ +++-+..++.+.++
T Consensus 62 ~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d---~~~v~~~~~~~~~~ 112 (287)
T 3rku_A 62 KLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ---AEKIKPFIENLPQE 112 (287)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTC---GGGHHHHHHTSCGG
T ss_pred eEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCC---HHHHHHHHHHHHHh
Confidence 89999999999999988887753 2357888888764 23334444444443
No 423
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=20.18 E-value=2.3e+02 Score=21.51 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=27.6
Q ss_pred cEEEEEcC-ChHHHHHHHHHHHHhCCCeEEEEcCCCCC
Q psy11559 97 GVLFANDV-SKERSKAIVGNFHRLGVINSVVTCLDGRQ 133 (189)
Q Consensus 97 g~v~A~D~-~~~Rl~~l~~~l~r~g~~nv~~~~~Da~~ 133 (189)
..|++.+. +..+.+.+.+.++..|. ++.++..|.++
T Consensus 54 ~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~ 90 (271)
T 4iin_A 54 LKVWINYRSNAEVADALKNELEEKGY-KAAVIKFDAAS 90 (271)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTC
T ss_pred CEEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCCCC
Confidence 47888888 67778888888888875 47778888754
Done!