Query psy1156
Match_columns 671
No_of_seqs 336 out of 2371
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 21:36:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1156.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1156hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 99.9 1.6E-24 5.6E-29 209.9 24.5 185 387-668 5-192 (196)
2 3r0h_A INAD, inactivation-NO-a 99.9 8.1E-24 2.8E-28 208.0 23.6 179 386-668 17-198 (206)
3 2qt5_A Glutamate receptor-inte 99.9 7.2E-23 2.4E-27 201.1 22.5 192 386-670 6-199 (200)
4 2xkx_A Disks large homolog 4; 99.9 2E-21 6.8E-26 225.9 25.7 186 385-667 57-245 (721)
5 1p1d_A PDZ45, glutamate recept 99.9 4.2E-21 1.4E-25 188.3 24.1 189 386-666 5-195 (196)
6 2xkx_A Disks large homolog 4; 99.8 9.2E-20 3.2E-24 211.9 25.9 237 387-667 154-392 (721)
7 1w9e_A Syntenin 1; cell adhesi 99.8 1.8E-17 6.2E-22 158.5 23.7 159 387-663 4-163 (166)
8 3suz_A Amyloid beta A4 precurs 99.8 4.5E-20 1.6E-24 200.2 6.3 170 385-665 202-373 (388)
9 3rle_A Golgi reassembly-stacki 99.7 1E-16 3.4E-21 159.6 15.4 153 418-666 16-170 (209)
10 4a8c_A Periplasmic PH-dependen 99.7 2.5E-16 8.5E-21 173.2 15.1 192 371-667 224-421 (436)
11 3pv2_A DEGQ; trypsin fold, PDZ 99.6 1.7E-15 5.9E-20 167.3 9.5 198 371-667 242-444 (451)
12 1i16_A Interleukin 16, LCF; cy 99.5 2.3E-14 7.9E-19 132.4 12.0 93 574-668 28-120 (130)
13 3b76_A E3 ubiquitin-protein li 99.5 6.6E-14 2.3E-18 127.7 12.7 91 575-667 24-114 (118)
14 3gge_A PDZ domain-containing p 99.5 9.3E-14 3.2E-18 122.6 12.9 87 575-668 5-92 (95)
15 2d92_A INAD-like protein; PDZ 99.5 9E-14 3.1E-18 124.1 11.6 91 575-667 15-106 (108)
16 1r6j_A Syntenin 1; PDZ, membra 99.5 1.3E-13 4.3E-18 118.6 11.9 78 575-665 4-81 (82)
17 2iwo_A Multiple PDZ domain pro 99.5 5.3E-14 1.8E-18 128.4 10.0 92 575-668 24-115 (120)
18 2fne_A Multiple PDZ domain pro 99.5 6.7E-14 2.3E-18 127.2 10.3 90 575-667 25-114 (117)
19 1wi4_A Synip, syntaxin binding 99.5 2.3E-13 7.9E-18 122.1 13.5 89 575-667 15-106 (109)
20 1d5g_A Human phosphatase HPTP1 99.5 3E-13 1E-17 117.5 13.8 90 575-667 5-94 (96)
21 1wf8_A Neurabin-I; PDZ domain, 99.5 1.9E-13 6.4E-18 121.5 12.7 92 575-669 9-103 (107)
22 2i1n_A Discs, large homolog 3; 99.5 2.9E-13 9.8E-18 119.0 13.7 92 575-669 4-97 (102)
23 2fe5_A Presynaptic protein SAP 99.5 2.6E-13 8.8E-18 117.3 13.2 89 575-666 3-93 (94)
24 2db5_A INAD-like protein; PDZ 99.5 1.2E-13 4.1E-18 126.7 11.0 93 575-669 25-118 (128)
25 2awx_A Synapse associated prot 99.5 2.7E-13 9.3E-18 120.1 12.9 91 575-668 3-95 (105)
26 2jik_A Synaptojanin-2 binding 99.5 3.5E-13 1.2E-17 118.2 13.4 91 575-668 7-99 (101)
27 2vwr_A Ligand of NUMB protein 99.5 3.7E-13 1.3E-17 116.8 13.3 89 575-668 3-91 (95)
28 3cbz_A Dishevelled-2; PDZ doma 99.5 1.3E-13 4.6E-18 123.2 10.4 91 575-667 5-97 (108)
29 1um1_A KIAA1849 protein, RSGI 99.5 4.2E-13 1.4E-17 119.7 13.4 89 575-666 8-96 (110)
30 2byg_A Channel associated prot 99.5 3.2E-13 1.1E-17 122.6 12.8 90 575-667 24-115 (117)
31 3axa_A Afadin, nectin-3, prote 99.5 3.4E-13 1.2E-17 119.5 12.5 90 575-668 11-100 (106)
32 1uhp_A Hypothetical protein KI 99.5 5.6E-13 1.9E-17 118.5 13.7 93 575-670 8-105 (107)
33 2qg1_A Multiple PDZ domain pro 99.5 6.3E-13 2.2E-17 114.5 13.2 86 575-666 4-89 (92)
34 1wha_A KIAA0147 protein, scrib 99.5 4.3E-13 1.5E-17 118.8 12.3 91 575-668 7-100 (105)
35 2q9v_A Membrane-associated gua 99.5 2.8E-13 9.7E-18 116.3 10.7 86 576-666 3-89 (90)
36 3egg_C Spinophilin; PP1, serin 99.5 4E-13 1.4E-17 130.2 12.9 88 575-665 80-170 (170)
37 1wfg_A Regulating synaptic mem 99.5 3.6E-13 1.2E-17 124.7 11.9 82 587-668 47-129 (131)
38 1q7x_A PDZ2B domain of PTP-BAS 99.4 5E-13 1.7E-17 118.8 12.0 91 575-668 9-104 (108)
39 2g5m_B Neurabin-2; spinophilin 99.4 3.8E-13 1.3E-17 120.5 11.3 92 575-669 4-98 (113)
40 1m5z_A GRIP, AMPA receptor int 99.4 9.9E-13 3.4E-17 113.1 13.3 85 575-665 6-90 (91)
41 1ueq_A Membrane associated gua 99.4 1.4E-12 4.7E-17 119.1 15.1 89 574-667 18-107 (123)
42 1uep_A Membrane associated gua 99.4 3.2E-13 1.1E-17 119.4 10.4 90 575-669 9-99 (103)
43 1g9o_A NHE-RF; PDZ domain, com 99.4 8.9E-13 3E-17 113.4 12.9 83 576-666 4-86 (91)
44 2dkr_A LIN-7 homolog B; LIN-7B 99.4 6.6E-13 2.2E-17 114.5 12.0 86 576-667 6-91 (93)
45 1ufx_A KIAA1526 protein; PDZ d 99.4 4.5E-13 1.5E-17 119.1 10.9 90 576-669 7-100 (103)
46 3o46_A Maguk P55 subfamily mem 99.4 8.4E-13 2.9E-17 114.3 12.3 87 575-668 4-90 (93)
47 3gge_A PDZ domain-containing p 99.4 5.1E-13 1.7E-17 117.9 11.0 87 385-479 3-91 (95)
48 2he4_A Na(+)/H(+) exchange reg 99.4 8.8E-13 3E-17 113.3 12.3 85 575-667 4-88 (90)
49 2o2t_A Multiple PDZ domain pro 99.4 3.8E-13 1.3E-17 121.3 10.1 91 575-667 20-111 (117)
50 1ujd_A KIAA0559 protein; PDZ d 99.4 7.6E-13 2.6E-17 119.8 12.2 93 575-668 12-111 (117)
51 2i04_A Membrane-associated gua 99.4 1.2E-12 4E-17 111.2 12.6 83 577-664 2-85 (85)
52 1kwa_A Hcask/LIN-2 protein; PD 99.4 9E-13 3.1E-17 113.6 11.9 85 576-667 2-86 (88)
53 1x6d_A Interleukin-16; PDZ dom 99.4 1.4E-12 4.7E-17 118.1 13.5 91 575-668 15-105 (119)
54 4amh_A Disks large homolog 1; 99.4 8.8E-13 3E-17 117.5 12.0 80 587-667 12-93 (106)
55 2vwr_A Ligand of NUMB protein 99.4 1.1E-12 3.6E-17 113.9 12.1 88 387-479 3-90 (95)
56 2eno_A Synaptojanin-2-binding 99.4 1E-12 3.5E-17 119.2 12.4 92 574-668 16-109 (120)
57 2jre_A C60-1 PDZ domain peptid 99.4 1.8E-12 6.1E-17 115.1 13.4 93 575-668 12-106 (108)
58 2jil_A GRIP1 protein, glutamat 99.4 1.4E-12 4.8E-17 113.4 12.5 90 576-668 4-94 (97)
59 2opg_A Multiple PDZ domain pro 99.4 2.2E-12 7.4E-17 112.4 13.6 90 575-669 4-93 (98)
60 1n7e_A AMPA receptor interacti 99.4 2.6E-12 8.8E-17 112.1 13.9 88 575-668 5-92 (97)
61 3i4w_A Disks large homolog 4; 99.4 1.7E-12 5.8E-17 114.2 12.8 85 575-666 11-95 (104)
62 3b76_A E3 ubiquitin-protein li 99.4 1.6E-12 5.4E-17 118.6 13.0 90 387-478 24-113 (118)
63 2kpk_A Membrane-associated gua 99.4 2E-12 6.7E-17 119.2 13.3 89 574-667 17-106 (129)
64 1qav_A Alpha-1 syntrophin (res 99.4 1.2E-12 4E-17 112.6 10.9 86 575-665 4-89 (90)
65 2ehr_A INAD-like protein; PDZ 99.4 1.3E-12 4.5E-17 117.9 11.7 92 575-668 15-112 (117)
66 2dc2_A GOPC, golgi associated 99.4 1.1E-12 3.9E-17 116.0 11.1 89 575-668 9-97 (103)
67 2daz_A INAD-like protein; PDZ 99.4 1.6E-12 5.4E-17 118.7 12.3 88 575-667 25-112 (124)
68 2f5y_A Regulator of G-protein 99.4 2.1E-12 7.2E-17 111.4 12.4 84 575-669 3-86 (91)
69 1ihj_A INAD; intermolecular di 99.4 1.4E-12 4.6E-17 113.7 11.2 89 576-666 6-97 (98)
70 1r6j_A Syntenin 1; PDZ, membra 99.4 1.3E-12 4.4E-17 112.3 10.9 77 387-476 4-80 (82)
71 3l4f_D SH3 and multiple ankyri 99.4 1.6E-12 5.6E-17 120.5 12.3 91 575-668 27-126 (132)
72 2uzc_A Human pdlim5, PDZ and L 99.4 1.6E-12 5.5E-17 111.1 11.3 83 576-666 4-86 (88)
73 1uju_A Scribble; PDZ domain, c 99.4 5.2E-13 1.8E-17 119.4 8.4 93 575-669 9-107 (111)
74 2r4h_A Membrane-associated gua 99.4 1.8E-12 6.3E-17 116.4 12.0 86 575-666 24-109 (112)
75 2iwo_A Multiple PDZ domain pro 99.4 1E-12 3.4E-17 120.0 10.2 94 385-480 22-115 (120)
76 2koj_A Partitioning defective 99.4 4.2E-12 1.4E-16 113.2 14.0 92 575-668 11-103 (111)
77 1rgw_A ZAsp protein; PDZ, cyph 99.4 1.6E-12 5.5E-17 110.2 10.8 82 577-666 3-84 (85)
78 2pa1_A PDZ and LIM domain prot 99.4 2.1E-12 7.3E-17 110.2 11.6 83 578-666 3-85 (87)
79 1d5g_A Human phosphatase HPTP1 99.4 3.8E-12 1.3E-16 110.4 13.1 91 386-479 4-94 (96)
80 4e34_A Golgi-associated PDZ an 99.4 1.7E-12 5.8E-17 110.7 10.7 83 576-664 3-86 (87)
81 1wi2_A Riken cDNA 2700099C19; 99.4 5.9E-12 2E-16 111.4 14.4 87 575-668 15-101 (104)
82 2vsp_A PDZ domain-containing p 99.4 9.9E-13 3.4E-17 113.4 9.0 85 575-667 3-87 (91)
83 2djt_A Unnamed protein product 99.4 2.2E-12 7.4E-17 113.8 11.4 92 575-670 11-102 (104)
84 3hpk_A Protein interacting wit 99.4 3.3E-12 1.1E-16 116.6 13.0 87 575-666 19-105 (125)
85 1wfg_A Regulating synaptic mem 99.4 3.1E-12 1.1E-16 118.4 12.8 82 397-479 45-128 (131)
86 2dlu_A INAD-like protein; PDZ 99.4 4.9E-12 1.7E-16 112.9 13.6 86 575-668 15-100 (111)
87 2fe5_A Presynaptic protein SAP 99.4 4.6E-12 1.6E-16 109.4 13.0 90 387-478 3-93 (94)
88 1wg6_A Hypothetical protein (r 99.4 9.7E-13 3.3E-17 121.1 9.2 93 576-669 26-125 (127)
89 2v90_A PDZ domain-containing p 99.4 3.4E-12 1.2E-16 110.9 12.2 89 575-668 3-91 (96)
90 2q3g_A PDZ and LIM domain prot 99.4 2.3E-12 7.9E-17 110.5 10.9 84 576-667 4-87 (89)
91 1x5q_A LAP4 protein; PDZ domai 99.4 9.4E-12 3.2E-16 110.9 15.2 91 575-669 15-108 (110)
92 2ego_A General receptor for ph 99.4 3.6E-12 1.2E-16 111.0 12.2 88 575-665 4-95 (96)
93 3e17_A Tight junction protein 99.4 2.6E-12 9E-17 110.6 11.2 80 578-667 3-82 (88)
94 2awx_A Synapse associated prot 99.4 4.4E-12 1.5E-16 112.3 12.9 93 386-481 2-96 (105)
95 3r68_A Na(+)/H(+) exchange reg 99.4 2.6E-12 8.9E-17 111.2 11.2 84 576-667 6-89 (95)
96 3qe1_A Sorting nexin-27, G pro 99.4 6.2E-12 2.1E-16 111.4 13.9 91 575-669 6-105 (107)
97 2fne_A Multiple PDZ domain pro 99.4 1.5E-12 5.1E-17 118.3 10.0 90 387-479 25-114 (117)
98 3o46_A Maguk P55 subfamily mem 99.4 3.6E-12 1.2E-16 110.3 11.9 88 385-479 2-89 (93)
99 1m5z_A GRIP, AMPA receptor int 99.4 6.2E-12 2.1E-16 108.1 13.0 87 385-477 4-90 (91)
100 2qg1_A Multiple PDZ domain pro 99.4 4.7E-12 1.6E-16 109.1 12.1 86 387-478 4-89 (92)
101 1v62_A KIAA1719 protein; struc 99.4 2.9E-12 1E-16 116.0 11.3 90 575-668 15-104 (117)
102 2d92_A INAD-like protein; PDZ 99.4 3.6E-12 1.2E-16 113.6 11.7 92 385-478 13-105 (108)
103 2he4_A Na(+)/H(+) exchange reg 99.4 5.6E-12 1.9E-16 108.3 12.5 86 386-479 3-88 (90)
104 3nfk_A Tyrosine-protein phosph 99.4 2.3E-12 7.9E-17 114.2 10.3 87 575-665 17-107 (107)
105 2csj_A TJP2 protein; PDZ domai 99.4 2.4E-12 8.3E-17 116.2 10.7 89 575-667 14-105 (117)
106 2qkv_A Inactivation-NO-after-p 99.4 2.8E-12 9.4E-17 112.0 10.6 88 575-670 8-95 (96)
107 2w4f_A Protein LAP4; structura 99.4 7.4E-12 2.5E-16 108.7 13.1 88 576-667 4-94 (97)
108 1kwa_A Hcask/LIN-2 protein; PD 99.4 4.2E-12 1.5E-16 109.3 11.4 84 388-479 2-86 (88)
109 2jik_A Synaptojanin-2 binding 99.4 6.1E-12 2.1E-16 110.3 12.6 92 386-479 6-98 (101)
110 1i16_A Interleukin 16, LCF; cy 99.4 2.7E-12 9.2E-17 118.5 10.8 93 384-479 26-119 (130)
111 2i1n_A Discs, large homolog 3; 99.4 5.9E-12 2E-16 110.6 12.5 91 387-479 4-95 (102)
112 2dmz_A INAD-like protein; PDZ 99.4 6.4E-12 2.2E-16 115.2 13.2 92 574-667 14-107 (129)
113 3axa_A Afadin, nectin-3, prote 99.4 7.1E-12 2.4E-16 111.0 13.0 92 385-480 9-100 (106)
114 1ky9_A Protease DO, DEGP, HTRA 99.4 9.9E-14 3.4E-18 153.1 1.3 154 418-667 286-441 (448)
115 2ejy_A 55 kDa erythrocyte memb 99.3 4E-12 1.4E-16 112.3 11.1 83 576-665 13-95 (97)
116 1q3o_A Shank1; PDZ, GKAP, pept 99.3 8.4E-12 2.9E-16 111.2 13.2 92 575-669 7-107 (109)
117 1qav_A Alpha-1 syntrophin (res 99.3 5.6E-12 1.9E-16 108.3 11.6 86 387-477 4-89 (90)
118 1um1_A KIAA1849 protein, RSGI 99.3 8.4E-12 2.9E-16 111.2 13.1 93 385-480 6-98 (110)
119 2db5_A INAD-like protein; PDZ 99.3 3.5E-12 1.2E-16 116.9 10.9 93 385-479 23-116 (128)
120 1nf3_C PAR-6B; semi-CRIB motif 99.3 2.8E-12 9.6E-17 117.9 10.2 92 575-667 29-126 (128)
121 2yt7_A Amyloid beta A4 precurs 99.3 6.6E-12 2.3E-16 110.6 12.2 91 575-667 9-100 (101)
122 2la8_A Inactivation-NO-after-p 99.3 4.6E-12 1.6E-16 113.2 11.2 85 576-668 3-87 (106)
123 1wf8_A Neurabin-I; PDZ domain, 99.3 5.1E-12 1.7E-16 112.2 11.5 92 385-479 7-101 (107)
124 2dc2_A GOPC, golgi associated 99.3 4.8E-12 1.6E-16 112.0 11.2 89 385-479 7-96 (103)
125 4e34_A Golgi-associated PDZ an 99.3 5E-12 1.7E-16 107.8 10.9 84 387-476 2-86 (87)
126 1ihj_A INAD; intermolecular di 99.3 7.2E-12 2.4E-16 109.1 12.0 91 387-478 5-97 (98)
127 2kom_A Partitioning defective 99.3 1.1E-11 3.7E-16 113.0 13.7 90 575-666 30-120 (121)
128 3i4w_A Disks large homolog 4; 99.3 8.9E-12 3.1E-16 109.5 12.5 89 384-479 8-96 (104)
129 2byg_A Channel associated prot 99.3 6.8E-12 2.3E-16 113.8 12.0 91 386-479 23-115 (117)
130 2jil_A GRIP1 protein, glutamat 99.3 9.4E-12 3.2E-16 108.2 12.3 90 388-479 4-93 (97)
131 1mfg_A ERB-B2 interacting prot 99.3 8.3E-12 2.8E-16 108.3 11.9 85 577-667 5-94 (95)
132 2fcf_A Multiple PDZ domain pro 99.3 1.1E-11 3.7E-16 108.9 12.8 91 576-668 5-101 (103)
133 2d90_A PDZ domain containing p 99.3 4.8E-12 1.6E-16 111.3 10.4 85 575-667 6-90 (102)
134 1v62_A KIAA1719 protein; struc 99.3 1E-11 3.5E-16 112.4 12.8 92 385-480 13-104 (117)
135 2dm8_A INAD-like protein; PDZ 99.3 6.1E-12 2.1E-16 113.0 11.2 88 576-668 18-105 (116)
136 2cs5_A Tyrosine-protein phosph 99.3 3E-12 1E-16 115.8 9.1 89 575-667 15-107 (119)
137 1uhp_A Hypothetical protein KI 99.3 9.8E-12 3.3E-16 110.4 12.1 93 385-479 6-102 (107)
138 3egg_C Spinophilin; PP1, serin 99.3 7.6E-12 2.6E-16 121.2 12.4 90 385-477 78-170 (170)
139 1n7e_A AMPA receptor interacti 99.3 1.4E-11 4.9E-16 107.3 13.0 88 386-479 4-91 (97)
140 2uzc_A Human pdlim5, PDZ and L 99.3 1.1E-11 3.8E-16 105.9 12.0 84 388-479 4-87 (88)
141 3sfj_A TAX1-binding protein 3; 99.3 8.3E-12 2.9E-16 109.9 11.6 87 578-665 7-104 (104)
142 1ujd_A KIAA0559 protein; PDZ d 99.3 1.2E-11 4.1E-16 111.9 12.9 94 386-480 11-111 (117)
143 2kv8_A RGS12, regulator of G-p 99.3 2.3E-12 7.7E-17 109.1 7.5 80 576-666 3-82 (83)
144 3ngh_A PDZ domain-containing p 99.3 7.4E-12 2.5E-16 110.7 11.2 83 577-666 3-85 (106)
145 3cbz_A Dishevelled-2; PDZ doma 99.3 3.6E-12 1.2E-16 113.8 9.2 90 387-479 5-97 (108)
146 3soe_A Membrane-associated gua 99.3 8E-12 2.8E-16 113.6 11.6 83 575-668 12-95 (113)
147 2pkt_A PDZ and LIM domain prot 99.3 9.4E-12 3.2E-16 107.1 11.5 84 577-668 5-88 (91)
148 1g9o_A NHE-RF; PDZ domain, com 99.3 1.4E-11 4.7E-16 105.9 12.5 83 387-477 3-85 (91)
149 2eeg_A PDZ and LIM domain prot 99.3 7.8E-12 2.7E-16 108.5 11.0 84 576-667 9-92 (94)
150 1uew_A Membrane associated gua 99.3 1.1E-11 3.8E-16 111.3 12.4 90 575-667 10-104 (114)
151 2o2t_A Multiple PDZ domain pro 99.3 4.9E-12 1.7E-16 114.0 10.0 94 385-480 18-112 (117)
152 2jxo_A Ezrin-radixin-moesin-bi 99.3 6E-12 2.1E-16 109.7 10.2 83 577-666 11-93 (98)
153 2r4h_A Membrane-associated gua 99.3 1E-11 3.4E-16 111.6 12.0 89 385-479 22-110 (112)
154 2eei_A PDZ domain-containing p 99.3 5.1E-12 1.7E-16 111.8 9.8 85 575-667 8-92 (106)
155 1q7x_A PDZ2B domain of PTP-BAS 99.3 8.7E-12 3E-16 110.8 11.3 91 386-479 8-103 (108)
156 1va8_A Maguk P55 subfamily mem 99.3 1.3E-11 4.3E-16 111.1 12.5 86 575-668 25-110 (113)
157 2dkr_A LIN-7 homolog B; LIN-7B 99.3 7.2E-12 2.5E-16 107.9 10.4 86 387-478 5-90 (93)
158 1nf3_C PAR-6B; semi-CRIB motif 99.3 8.3E-12 2.8E-16 114.8 11.4 96 384-479 26-126 (128)
159 2eeh_A PDZ domain-containing p 99.3 2.4E-11 8.1E-16 106.6 13.8 88 575-669 10-97 (100)
160 1va8_A Maguk P55 subfamily mem 99.3 1.6E-11 5.5E-16 110.4 12.8 87 385-479 23-109 (113)
161 2iwq_A Multiple PDZ domain pro 99.3 1.7E-11 6E-16 112.3 13.3 91 576-668 25-121 (123)
162 1tp5_A Presynaptic density pro 99.3 1.1E-11 3.9E-16 111.9 11.9 85 575-666 14-98 (119)
163 2pa1_A PDZ and LIM domain prot 99.3 1.5E-11 5E-16 105.0 11.9 84 390-479 3-86 (87)
164 3gsl_A Disks large homolog 4; 99.3 1.4E-11 4.8E-16 118.9 13.3 90 575-667 5-96 (196)
165 1ueq_A Membrane associated gua 99.3 1.8E-11 6.1E-16 111.7 13.2 90 385-480 17-108 (123)
166 2dls_A PDZ-rhogef, RHO guanine 99.3 1.5E-11 5E-16 106.7 12.1 84 575-670 8-91 (93)
167 2q9v_A Membrane-associated gua 99.3 8.8E-12 3E-16 106.9 10.5 84 388-477 3-88 (90)
168 2opg_A Multiple PDZ domain pro 99.3 2.2E-11 7.5E-16 106.0 13.1 88 387-479 4-91 (98)
169 2i04_A Membrane-associated gua 99.3 1.7E-11 5.9E-16 104.0 12.0 82 389-476 2-85 (85)
170 2iwn_A Multiple PDZ domain pro 99.3 2E-11 6.7E-16 105.6 12.6 88 576-666 5-93 (97)
171 2e7k_A Maguk P55 subfamily mem 99.3 8.4E-12 2.9E-16 108.1 10.1 83 576-667 7-89 (91)
172 2daz_A INAD-like protein; PDZ 99.3 1.4E-11 4.6E-16 112.5 12.0 91 384-479 22-112 (124)
173 1v6b_A Harmonin isoform A1; st 99.3 1.3E-11 4.6E-16 111.9 11.8 86 577-667 20-108 (118)
174 3l4f_D SH3 and multiple ankyri 99.3 1.9E-11 6.4E-16 113.4 12.9 93 385-479 25-125 (132)
175 1wfv_A Membrane associated gua 99.3 3.2E-12 1.1E-16 112.2 7.3 87 576-668 12-98 (103)
176 4amh_A Disks large homolog 1; 99.3 1.4E-11 4.7E-16 109.7 11.5 82 398-479 11-93 (106)
177 2h2b_A Tight junction protein 99.3 1.8E-11 6.3E-16 108.3 12.3 90 575-668 7-99 (107)
178 1wi4_A Synip, syntaxin binding 99.3 1.7E-11 5.7E-16 109.9 12.1 90 385-479 13-106 (109)
179 1wha_A KIAA0147 protein, scrib 99.3 9.4E-12 3.2E-16 110.1 10.3 92 385-479 5-99 (105)
180 2v90_A PDZ domain-containing p 99.3 1.9E-11 6.4E-16 106.2 12.0 89 387-480 3-91 (96)
181 1n7t_A 99-MER peptide of densi 99.3 8.2E-12 2.8E-16 110.0 9.8 87 575-667 11-102 (103)
182 3nfk_A Tyrosine-protein phosph 99.3 1.1E-11 3.8E-16 109.8 10.6 88 385-477 15-107 (107)
183 3e17_A Tight junction protein 99.3 1.1E-11 3.9E-16 106.7 10.3 80 389-478 2-81 (88)
184 1z87_A Alpha-1-syntrophin; pro 99.3 6.8E-12 2.3E-16 129.6 10.5 89 574-667 76-164 (263)
185 2q3g_A PDZ and LIM domain prot 99.3 1.7E-11 5.7E-16 105.1 11.2 83 389-479 5-87 (89)
186 3hpk_A Protein interacting wit 99.3 2.1E-11 7.3E-16 111.2 12.6 85 388-477 20-104 (125)
187 2g5m_B Neurabin-2; spinophilin 99.3 8.3E-12 2.8E-16 111.8 9.6 91 387-480 4-97 (113)
188 2jre_A C60-1 PDZ domain peptid 99.3 2E-11 6.8E-16 108.3 12.0 95 385-479 10-105 (108)
189 2ego_A General receptor for ph 99.3 2.3E-11 7.8E-16 105.9 12.1 89 387-477 4-95 (96)
190 1um7_A Synapse-associated prot 99.3 1.2E-11 4E-16 110.4 10.4 86 574-666 14-99 (113)
191 3bpu_A Membrane-associated gua 99.3 1.6E-11 5.6E-16 104.9 10.8 83 575-666 3-86 (88)
192 1uep_A Membrane associated gua 99.3 5.7E-12 2E-16 111.3 8.2 87 387-479 9-97 (103)
193 1uju_A Scribble; PDZ domain, c 99.3 5.1E-12 1.8E-16 112.9 8.0 93 386-479 8-105 (111)
194 1v5q_A GRIP1 homolog, glutamat 99.3 2.5E-11 8.6E-16 110.6 12.6 92 575-667 15-108 (122)
195 1rgw_A ZAsp protein; PDZ, cyph 99.3 1.2E-11 4.2E-16 104.7 9.7 82 389-478 3-84 (85)
196 2cs5_A Tyrosine-protein phosph 99.3 1.2E-11 4E-16 111.9 10.1 89 385-479 13-107 (119)
197 1wf7_A Enigma homologue protei 99.3 9.7E-12 3.3E-16 109.7 9.2 85 576-668 6-90 (103)
198 3r0h_A INAD, inactivation-NO-a 99.3 3.6E-11 1.2E-15 117.7 14.1 89 575-667 18-109 (206)
199 1vb7_A PDZ and LIM domain 2; P 99.3 9.5E-12 3.2E-16 108.0 8.8 85 578-668 7-91 (94)
200 2ehr_A INAD-like protein; PDZ 99.3 1.5E-11 5.1E-16 110.9 10.3 94 385-479 13-111 (117)
201 2eno_A Synaptojanin-2-binding 99.3 2.1E-11 7E-16 110.6 11.3 92 386-479 16-108 (120)
202 2vsp_A PDZ domain-containing p 99.3 6.8E-12 2.3E-16 108.1 7.7 85 387-479 3-87 (91)
203 3r68_A Na(+)/H(+) exchange reg 99.3 1.9E-11 6.6E-16 105.6 10.5 85 387-479 5-89 (95)
204 1ufx_A KIAA1526 protein; PDZ d 99.3 1.5E-11 5.1E-16 109.3 10.0 88 387-479 6-98 (103)
205 1wi2_A Riken cDNA 2700099C19; 99.3 2.8E-11 9.4E-16 107.1 11.7 86 387-479 15-100 (104)
206 3khf_A Microtubule-associated 99.3 2.3E-11 7.9E-16 106.2 11.0 86 578-667 5-94 (99)
207 2ejy_A 55 kDa erythrocyte memb 99.3 2.3E-11 7.9E-16 107.4 11.1 83 388-477 13-95 (97)
208 2djt_A Unnamed protein product 99.3 2E-11 6.8E-16 107.6 10.7 91 385-479 9-99 (104)
209 2kpk_A Membrane-associated gua 99.3 2.9E-11 9.8E-16 111.3 12.2 89 385-479 16-106 (129)
210 2gzv_A PRKCA-binding protein; 99.3 3.8E-11 1.3E-15 108.5 12.5 86 575-665 24-109 (114)
211 2vsv_A Rhophilin-2; scaffold p 99.3 2.8E-11 9.5E-16 109.1 11.5 82 576-667 24-105 (109)
212 2f5y_A Regulator of G-protein 99.3 3.4E-11 1.2E-15 103.8 11.6 82 387-479 3-84 (91)
213 1x6d_A Interleukin-16; PDZ dom 99.3 2.7E-11 9.4E-16 109.5 11.4 93 385-481 13-106 (119)
214 2w4f_A Protein LAP4; structura 99.2 5.3E-11 1.8E-15 103.3 12.4 89 388-479 4-94 (97)
215 1qau_A Neuronal nitric oxide s 99.2 6.4E-11 2.2E-15 105.7 13.1 86 577-668 3-89 (112)
216 2koj_A Partitioning defective 99.2 7.3E-11 2.5E-15 105.1 13.4 92 386-480 10-103 (111)
217 1wg6_A Hypothetical protein (r 99.2 1.6E-11 5.6E-16 112.9 9.3 90 389-479 27-123 (127)
218 3ngh_A PDZ domain-containing p 99.2 2.4E-11 8.1E-16 107.5 10.0 86 387-479 1-86 (106)
219 2yuy_A RHO GTPase activating p 99.2 7.5E-12 2.6E-16 114.7 6.9 91 576-670 9-124 (126)
220 2pkt_A PDZ and LIM domain prot 99.2 4.8E-11 1.7E-15 102.6 11.6 83 389-479 5-87 (91)
221 3qe1_A Sorting nexin-27, G pro 99.2 5.2E-11 1.8E-15 105.4 12.0 91 386-479 5-103 (107)
222 1uez_A KIAA1526 protein; PDZ d 99.2 1.6E-11 5.6E-16 107.7 8.6 87 575-667 8-94 (101)
223 2d90_A PDZ domain containing p 99.2 2.4E-11 8.3E-16 106.8 9.7 87 385-479 4-90 (102)
224 2csj_A TJP2 protein; PDZ domai 99.2 3.2E-11 1.1E-15 108.8 10.6 90 387-480 14-106 (117)
225 1whd_A RGS3, regulator of G-pr 99.2 3.8E-11 1.3E-15 105.5 10.8 83 575-668 15-97 (100)
226 2dlu_A INAD-like protein; PDZ 99.2 3.1E-11 1.1E-15 107.7 10.3 86 387-480 15-100 (111)
227 2yt7_A Amyloid beta A4 precurs 99.2 6E-11 2E-15 104.5 12.0 91 385-478 7-99 (101)
228 2vz5_A TAX1-binding protein 3; 99.2 4E-11 1.4E-15 112.2 11.5 92 575-667 23-125 (139)
229 1x5q_A LAP4 protein; PDZ domai 99.2 9E-11 3.1E-15 104.5 13.2 92 385-479 13-106 (110)
230 2la8_A Inactivation-NO-after-p 99.2 4.4E-11 1.5E-15 106.8 11.0 84 388-479 3-86 (106)
231 1uew_A Membrane associated gua 99.2 5.5E-11 1.9E-15 106.8 11.7 94 385-480 8-105 (114)
232 1uez_A KIAA1526 protein; PDZ d 99.2 2.4E-11 8.2E-16 106.6 9.1 90 385-480 6-95 (101)
233 3k1r_A Harmonin; protein-prote 99.2 2.5E-11 8.5E-16 118.9 9.9 86 575-667 84-169 (192)
234 1q3o_A Shank1; PDZ, GKAP, pept 99.2 7.8E-11 2.7E-15 104.9 12.2 89 388-478 8-104 (109)
235 2dmz_A INAD-like protein; PDZ 99.2 5.4E-11 1.8E-15 109.0 11.4 95 385-480 13-108 (129)
236 2eeh_A PDZ domain-containing p 99.2 7.1E-11 2.4E-15 103.5 11.6 89 385-480 8-96 (100)
237 2qkv_A Inactivation-NO-after-p 99.2 6E-11 2.1E-15 103.5 11.0 86 385-478 6-91 (96)
238 1tp5_A Presynaptic density pro 99.2 7.5E-11 2.6E-15 106.5 12.0 89 384-479 11-99 (119)
239 1ujv_A Membrane associated gua 99.2 9.5E-11 3.3E-15 102.6 12.3 83 575-668 10-93 (96)
240 2e7k_A Maguk P55 subfamily mem 99.2 2.6E-11 8.9E-16 105.0 8.6 85 385-478 4-88 (91)
241 2kjd_A Sodium/hydrogen exchang 99.2 4.8E-11 1.6E-15 109.0 10.8 85 575-666 9-93 (128)
242 2edp_A Fragment, shroom family 99.2 2.3E-11 7.8E-16 106.9 8.2 86 576-667 10-95 (100)
243 1uit_A Human discs large 5 pro 99.2 6.2E-11 2.1E-15 106.8 11.0 86 575-669 19-104 (117)
244 2h2b_A Tight junction protein 99.2 9.1E-11 3.1E-15 103.8 11.8 92 385-480 5-99 (107)
245 1uit_A Human discs large 5 pro 99.2 1E-10 3.5E-15 105.4 12.3 86 387-481 19-104 (117)
246 2eeg_A PDZ and LIM domain prot 99.2 5E-11 1.7E-15 103.4 9.8 85 387-479 8-92 (94)
247 1y7n_A Amyloid beta A4 precurs 99.2 1.2E-10 4E-15 101.1 12.1 79 575-665 11-89 (90)
248 2edz_A PDZ domain-containing p 99.2 5.1E-11 1.7E-15 107.0 10.1 84 576-666 14-97 (114)
249 4fln_A Protease DO-like 2, chl 99.2 6.7E-11 2.3E-15 133.2 13.1 55 605-662 415-469 (539)
250 2edv_A FERM and PDZ domain-con 99.2 2.4E-11 8.4E-16 106.1 7.6 82 575-666 8-89 (96)
251 1wfv_A Membrane associated gua 99.2 2.1E-11 7.3E-16 106.9 7.1 88 386-479 10-97 (103)
252 3k1r_A Harmonin; protein-prote 99.2 7.6E-11 2.6E-15 115.5 11.7 89 385-480 82-170 (192)
253 2dm8_A INAD-like protein; PDZ 99.2 5.8E-11 2E-15 106.6 9.8 90 387-481 17-106 (116)
254 1wf7_A Enigma homologue protei 99.2 5.6E-11 1.9E-15 104.8 9.5 88 386-481 4-91 (103)
255 2dls_A PDZ-rhogef, RHO guanine 99.2 1.7E-10 5.8E-15 99.9 12.2 82 386-479 7-88 (93)
256 1wif_A RSGI RUH-020, riken cDN 99.2 4.8E-11 1.6E-15 110.4 9.1 84 575-666 27-111 (126)
257 1vb7_A PDZ and LIM domain 2; P 99.2 3.7E-11 1.3E-15 104.2 7.8 85 389-479 6-90 (94)
258 2iwn_A Multiple PDZ domain pro 99.2 1.2E-10 4E-15 100.6 10.9 90 388-479 5-94 (97)
259 2kv8_A RGS12, regulator of G-p 99.2 2.4E-11 8.3E-16 102.7 6.4 80 387-477 2-81 (83)
260 2edp_A Fragment, shroom family 99.2 5.8E-11 2E-15 104.4 8.9 88 385-479 7-95 (100)
261 2eei_A PDZ domain-containing p 99.2 3.2E-11 1.1E-15 106.6 7.3 86 386-479 7-92 (106)
262 1z87_A Alpha-1-syntrophin; pro 99.2 3E-11 1E-15 124.8 8.2 90 385-480 75-165 (263)
263 3bpu_A Membrane-associated gua 99.2 8.9E-11 3E-15 100.3 9.8 83 387-479 3-87 (88)
264 2z17_A Pleckstrin homology SEC 99.2 9.3E-11 3.2E-15 103.5 10.2 83 577-662 17-103 (104)
265 1wh1_A KIAA1095 protein; PDZ d 99.2 1.6E-10 5.4E-15 105.5 12.1 92 575-669 19-110 (124)
266 1mfg_A ERB-B2 interacting prot 99.2 1.7E-10 5.7E-15 100.0 11.6 85 389-478 5-93 (95)
267 2kom_A Partitioning defective 99.2 2.4E-10 8.4E-15 104.0 12.9 89 387-478 30-120 (121)
268 3khf_A Microtubule-associated 99.2 1.1E-10 3.9E-15 101.8 10.0 87 390-479 5-94 (99)
269 3tsv_A Tight junction protein 99.2 1.3E-10 4.6E-15 106.5 10.8 73 588-666 39-112 (124)
270 3soe_A Membrane-associated gua 99.2 1.8E-10 6E-15 104.8 11.3 83 385-479 10-94 (113)
271 1p1d_A PDZ45, glutamate recept 99.1 1.8E-10 6.2E-15 112.6 12.1 92 575-667 6-99 (196)
272 2d8i_A T-cell lymphoma invasio 99.1 8E-11 2.7E-15 106.8 8.6 88 575-668 15-103 (114)
273 2qt5_A Glutamate receptor-inte 99.1 2.6E-10 8.7E-15 111.6 12.8 88 575-667 7-94 (200)
274 2fcf_A Multiple PDZ domain pro 99.1 2.6E-10 8.9E-15 100.1 11.6 92 387-479 4-100 (103)
275 3cyy_A Tight junction protein 99.1 3.2E-10 1.1E-14 97.2 11.8 81 577-667 4-84 (92)
276 1vae_A Rhophilin 2, rhophilin, 99.1 4.8E-11 1.7E-15 107.6 6.9 82 577-668 17-98 (111)
277 1n7t_A 99-MER peptide of densi 99.1 1.6E-10 5.3E-15 101.8 10.0 88 386-478 10-101 (103)
278 1um7_A Synapse-associated prot 99.1 8.4E-11 2.9E-15 104.8 8.4 88 385-479 13-100 (113)
279 2gzv_A PRKCA-binding protein; 99.1 3.2E-10 1.1E-14 102.4 12.2 86 387-477 24-109 (114)
280 2qbw_A PDZ-fibronectin fusion 99.1 1.8E-10 6E-15 112.0 10.9 75 588-665 2-81 (195)
281 3kzd_A TIAM-1, T-lymphoma inva 99.1 3.2E-10 1.1E-14 99.9 11.5 84 575-664 6-90 (94)
282 1v6b_A Harmonin isoform A1; st 99.1 2.1E-10 7E-15 104.1 10.4 88 386-479 17-108 (118)
283 2jxo_A Ezrin-radixin-moesin-bi 99.1 1.8E-10 6.1E-15 100.4 9.5 83 388-478 10-93 (98)
284 2iwq_A Multiple PDZ domain pro 99.1 4.4E-10 1.5E-14 102.9 12.1 93 386-479 23-120 (123)
285 1v5l_A PDZ and LIM domain 3; a 99.1 4.2E-11 1.4E-15 105.7 5.0 75 588-667 15-89 (103)
286 1b8q_A Protein (neuronal nitri 99.1 1.5E-10 5.1E-15 105.8 8.8 87 575-667 8-95 (127)
287 3sfj_A TAX1-binding protein 3; 99.1 4.5E-10 1.6E-14 98.7 11.6 88 389-477 6-104 (104)
288 1y7n_A Amyloid beta A4 precurs 99.1 4.6E-10 1.6E-14 97.4 11.4 78 387-476 11-88 (90)
289 1v5q_A GRIP1 homolog, glutamat 99.1 3.2E-10 1.1E-14 103.2 10.9 95 385-480 13-109 (122)
290 1x5n_A Harmonin; PDZ domain, u 99.1 3.3E-10 1.1E-14 101.4 10.6 83 576-665 16-98 (114)
291 2lob_A Golgi-associated PDZ an 98.7 8.3E-12 2.8E-16 112.7 0.0 83 575-663 27-110 (112)
292 1wif_A RSGI RUH-020, riken cDN 99.1 2E-10 6.7E-15 106.3 9.2 84 385-477 25-110 (126)
293 2rcz_A Tight junction protein 99.1 6.7E-10 2.3E-14 92.5 11.6 69 587-665 12-80 (81)
294 1uf1_A KIAA1526 protein; PDZ d 99.1 8E-10 2.7E-14 101.2 13.0 85 577-668 22-106 (128)
295 3cyy_A Tight junction protein 99.1 6.4E-10 2.2E-14 95.3 11.5 83 388-480 3-85 (92)
296 2eaq_A LIM domain only protein 99.1 3.8E-10 1.3E-14 96.6 10.0 82 578-666 6-89 (90)
297 1qau_A Neuronal nitric oxide s 99.1 8.3E-10 2.8E-14 98.4 12.5 87 388-480 2-89 (112)
298 2vsv_A Rhophilin-2; scaffold p 99.1 3.5E-10 1.2E-14 101.8 9.8 81 387-478 23-104 (109)
299 2edz_A PDZ domain-containing p 99.1 3.3E-10 1.1E-14 101.7 9.5 86 387-479 13-98 (114)
300 2vz5_A TAX1-binding protein 3; 99.1 5.7E-10 2E-14 104.3 11.3 96 385-481 21-127 (139)
301 1x5n_A Harmonin; PDZ domain, u 99.1 7.1E-10 2.4E-14 99.3 10.9 86 387-479 15-101 (114)
302 3tsv_A Tight junction protein 99.1 4.3E-10 1.5E-14 103.1 9.6 83 387-479 29-113 (124)
303 3kzd_A TIAM-1, T-lymphoma inva 99.1 1.4E-09 4.8E-14 95.8 12.3 84 387-476 6-90 (94)
304 1ujv_A Membrane associated gua 99.1 1.5E-09 5E-14 95.0 12.4 83 385-479 8-92 (96)
305 2edv_A FERM and PDZ domain-con 99.0 1.3E-10 4.5E-15 101.4 5.2 82 387-478 8-89 (96)
306 2z17_A Pleckstrin homology SEC 99.0 5.2E-10 1.8E-14 98.7 9.1 84 389-474 17-103 (104)
307 3qik_A Phosphatidylinositol 3, 99.0 9.3E-10 3.2E-14 98.1 10.7 79 578-665 20-100 (101)
308 2lob_A Golgi-associated PDZ an 98.6 2.1E-11 7.2E-16 110.0 0.0 84 386-475 26-110 (112)
309 2rcz_A Tight junction protein 99.0 1.4E-09 4.9E-14 90.5 11.2 75 393-477 6-80 (81)
310 3shw_A Tight junction protein 99.0 6.4E-10 2.2E-14 123.3 11.5 81 577-666 3-84 (468)
311 2yuy_A RHO GTPase activating p 99.0 1.5E-10 5.1E-15 106.0 4.8 90 387-479 8-121 (126)
312 1whd_A RGS3, regulator of G-pr 99.0 3.9E-10 1.3E-14 99.0 7.1 82 387-479 15-96 (100)
313 3tsz_A Tight junction protein 99.0 9.5E-10 3.3E-14 119.5 11.6 83 575-666 9-92 (391)
314 2krg_A Na(+)/H(+) exchange reg 99.0 3.9E-10 1.3E-14 113.2 7.8 83 575-665 9-92 (216)
315 2eaq_A LIM domain only protein 99.0 1.6E-09 5.5E-14 92.7 10.2 82 389-478 5-89 (90)
316 2qbw_A PDZ-fibronectin fusion 99.0 1.2E-09 4.2E-14 106.1 10.6 75 400-476 2-80 (195)
317 1uf1_A KIAA1526 protein; PDZ d 99.0 5.6E-09 1.9E-13 95.5 14.3 89 387-482 20-108 (128)
318 1w9e_A Syntenin 1; cell adhesi 99.0 2.7E-09 9.2E-14 101.7 12.0 83 575-665 4-86 (166)
319 3shw_A Tight junction protein 99.0 1.3E-09 4.4E-14 120.9 11.0 83 388-480 2-86 (468)
320 1v5l_A PDZ and LIM domain 3; a 99.0 3.8E-10 1.3E-14 99.5 5.4 79 399-482 14-92 (103)
321 1b8q_A Protein (neuronal nitri 99.0 1.8E-09 6.3E-14 98.5 10.2 91 385-481 6-97 (127)
322 2kjd_A Sodium/hydrogen exchang 99.0 2.9E-09 1E-13 97.0 11.4 86 386-479 8-94 (128)
323 2d8i_A T-cell lymphoma invasio 99.0 1.3E-09 4.6E-14 98.7 9.1 88 386-479 14-102 (114)
324 3tsz_A Tight junction protein 98.9 3.9E-09 1.3E-13 114.7 11.2 85 386-480 8-94 (391)
325 2yub_A LIMK-2, LIM domain kina 98.9 7.5E-09 2.6E-13 94.2 11.2 90 577-668 14-107 (118)
326 3suz_A Amyloid beta A4 precurs 98.9 1.9E-09 6.4E-14 116.9 7.3 91 575-667 204-295 (388)
327 1vae_A Rhophilin 2, rhophilin, 98.9 1.2E-09 4E-14 98.5 4.6 80 388-478 16-96 (111)
328 2yub_A LIMK-2, LIM domain kina 98.8 1.9E-08 6.4E-13 91.6 11.2 91 389-481 14-108 (118)
329 3qik_A Phosphatidylinositol 3, 98.8 1.5E-08 5E-13 90.4 10.2 78 389-476 19-99 (101)
330 2krg_A Na(+)/H(+) exchange reg 98.8 3.7E-09 1.3E-13 106.1 6.7 87 386-480 8-95 (216)
331 1wh1_A KIAA1095 protein; PDZ d 98.8 1E-08 3.5E-13 93.5 8.7 91 386-480 18-109 (124)
332 2kjp_A Uncharacterized protein 98.5 4.1E-08 1.4E-12 85.3 3.7 58 606-667 2-60 (91)
333 2l97_A HTRA, putative serine p 98.5 9.7E-08 3.3E-12 88.5 6.0 101 369-481 11-118 (134)
334 3i18_A LMO2051 protein; alpha- 98.5 2.7E-07 9.2E-12 81.0 8.3 59 605-667 7-66 (100)
335 2i6v_A General secretion pathw 98.5 2E-07 6.9E-12 79.7 7.2 59 605-666 19-78 (87)
336 3id1_A Regulator of sigma E pr 98.5 4.9E-07 1.7E-11 78.8 9.3 57 608-667 5-62 (95)
337 2zpm_A Regulator of sigma E pr 98.5 2.9E-07 9.9E-12 78.7 7.6 58 606-666 5-62 (91)
338 2pzd_A Serine protease HTRA2; 98.5 4.4E-07 1.5E-11 80.8 9.0 57 605-666 35-91 (113)
339 2kl1_A YLBL protein; structure 98.4 1.9E-07 6.6E-12 81.2 5.9 59 605-667 5-64 (94)
340 2l97_A HTRA, putative serine p 98.4 6E-07 2E-11 83.1 8.4 59 605-667 57-116 (134)
341 2p3w_A Probable serine proteas 98.4 1E-06 3.5E-11 78.5 8.6 57 605-666 35-91 (112)
342 1fc6_A Photosystem II D1 prote 98.3 1.6E-06 5.5E-11 93.6 10.6 76 588-667 85-160 (388)
343 3rle_A Golgi reassembly-stacki 98.3 1.1E-06 3.9E-11 87.0 8.5 73 589-666 3-76 (209)
344 2i4s_A General secretion pathw 98.2 1.7E-06 5.9E-11 76.5 7.2 58 606-666 38-96 (105)
345 2pzd_A Serine protease HTRA2; 98.2 3E-06 1E-10 75.4 8.0 59 418-480 35-93 (113)
346 2i6v_A General secretion pathw 98.2 1.6E-06 5.6E-11 74.0 5.6 59 418-479 19-79 (87)
347 1te0_A Protease DEGS; two doma 98.1 5.4E-06 1.8E-10 87.0 9.8 60 605-667 244-304 (318)
348 1y8t_A Hypothetical protein RV 98.1 5.5E-06 1.9E-10 87.0 9.9 73 588-667 229-303 (324)
349 3i18_A LMO2051 protein; alpha- 98.1 3.4E-06 1.1E-10 73.9 6.8 59 418-480 7-67 (100)
350 2kjp_A Uncharacterized protein 98.1 1E-06 3.5E-11 76.4 3.0 58 419-480 2-61 (91)
351 3stj_A Protease DEGQ; serine p 98.1 4.5E-06 1.5E-10 89.0 8.3 60 605-667 263-323 (345)
352 1fc6_A Photosystem II D1 prote 98.1 8.1E-06 2.8E-10 88.1 10.4 75 400-479 85-160 (388)
353 3stj_A Protease DEGQ; serine p 98.1 6.7E-07 2.3E-11 95.4 0.6 97 372-481 225-325 (345)
354 2i4s_A General secretion pathw 98.0 1E-05 3.5E-10 71.5 8.0 59 418-479 37-97 (105)
355 2p3w_A Probable serine proteas 98.0 7.8E-06 2.7E-10 72.7 7.3 59 418-480 35-93 (112)
356 2hga_A Conserved protein MTH13 98.0 8.9E-06 3.1E-10 74.7 7.7 57 605-666 25-82 (125)
357 3id1_A Regulator of sigma E pr 98.0 7.6E-06 2.6E-10 71.2 6.5 57 420-479 4-62 (95)
358 2kl1_A YLBL protein; structure 98.0 3.3E-06 1.1E-10 73.3 4.1 59 418-480 5-65 (94)
359 3qo6_A Protease DO-like 1, chl 98.0 9.5E-06 3.2E-10 86.4 8.5 76 589-667 234-322 (348)
360 4fgm_A Aminopeptidase N family 98.0 6.7E-06 2.3E-10 93.8 7.3 70 588-667 485-555 (597)
361 1lcy_A HTRA2 serine protease; 98.0 1.1E-05 3.8E-10 85.0 8.3 58 605-667 256-313 (325)
362 2zpm_A Regulator of sigma E pr 98.0 8.9E-06 3E-10 69.4 6.0 59 419-480 5-64 (91)
363 3k50_A Putative S41 protease; 97.9 7.1E-06 2.4E-10 89.5 6.2 74 588-667 74-147 (403)
364 1te0_A Protease DEGS; two doma 97.9 4E-06 1.4E-10 88.0 3.5 60 418-480 244-305 (318)
365 4fgm_A Aminopeptidase N family 97.9 1.9E-05 6.7E-10 90.1 9.0 72 399-481 484-557 (597)
366 3pv2_A DEGQ; trypsin fold, PDZ 97.9 2E-05 6.8E-10 87.0 8.8 60 605-667 282-342 (451)
367 1y8t_A Hypothetical protein RV 97.9 2.1E-05 7.1E-10 82.6 8.1 73 400-480 229-304 (324)
368 4a8c_A Periplasmic PH-dependen 97.9 2.3E-05 7.9E-10 86.0 8.3 60 605-667 263-323 (436)
369 3k50_A Putative S41 protease; 97.8 1.5E-05 5.2E-10 86.9 6.5 75 399-479 73-147 (403)
370 3qo6_A Protease DO-like 1, chl 97.8 3E-05 1E-09 82.5 7.0 61 418-481 251-324 (348)
371 2hga_A Conserved protein MTH13 97.6 5.1E-05 1.7E-09 69.6 5.6 57 418-479 25-83 (125)
372 3num_A Serine protease HTRA1; 97.6 9E-06 3.1E-10 85.8 0.0 58 605-667 254-311 (332)
373 1lcy_A HTRA2 serine protease; 97.6 0.00011 3.7E-09 77.5 8.2 59 418-480 256-314 (325)
374 1ky9_A Protease DO, DEGP, HTRA 97.4 4E-05 1.4E-09 84.5 1.9 60 605-667 286-346 (448)
375 3num_A Serine protease HTRA1; 97.3 4E-05 1.4E-09 80.9 0.0 60 418-481 254-313 (332)
376 1k32_A Tricorn protease; prote 97.2 0.00043 1.5E-08 82.6 8.4 70 588-666 737-815 (1045)
377 1k32_A Tricorn protease; prote 96.9 0.0019 6.4E-08 77.1 9.1 70 399-478 736-815 (1045)
378 4fln_A Protease DO-like 2, chl 96.8 0.0025 8.6E-08 71.9 8.6 61 605-667 277-346 (539)
379 3dor_A Protein CT_858, CPAF; m 27.6 57 0.002 37.0 5.2 28 607-639 98-125 (583)
380 3dor_A Protein CT_858, CPAF; m 20.2 1E+02 0.0035 35.0 5.4 30 419-453 97-126 (583)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.93 E-value=1.6e-24 Score=209.93 Aligned_cols=185 Identities=29% Similarity=0.485 Sum_probs=153.5
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
+++.|+|.+.. ++|||+|.++.+.+. +...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 5 ~~~~v~l~~~~--~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (196)
T 3gsl_A 5 EYEEITLERGN--SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 82 (196)
T ss_dssp EEEEEEEECBT--TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 56788998854 789999999876532 112789999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhccccc
Q psy1156 466 GPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAIIST 545 (671)
Q Consensus 466 ~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~s~ 545 (671)
.+..+.|+|.|.+....
T Consensus 83 ~g~~v~l~v~r~~~~~~--------------------------------------------------------------- 99 (196)
T 3gsl_A 83 AGSIVRLYVMRRKPPAE--------------------------------------------------------------- 99 (196)
T ss_dssp SCSEEEEEEEEECCCCE---------------------------------------------------------------
T ss_pred CCCcEEEEEEecCCCcc---------------------------------------------------------------
Confidence 89999999988432000
Q ss_pred CCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCC
Q psy1156 546 GSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGR 623 (671)
Q Consensus 546 ~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGr 623 (671)
....+.+.+.. .+|||.+.++..... ...|++|..|.++|+|+++|+
T Consensus 100 -----------------------------~~~~v~l~~~~--~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~ 148 (196)
T 3gsl_A 100 -----------------------------KVMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGR 148 (196)
T ss_dssp -----------------------------EEEEEEEEEBT--TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCC
T ss_pred -----------------------------ccEEEEEecCC--CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCC
Confidence 11245666665 589999988765432 245899999999999999999
Q ss_pred CCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCCC
Q psy1156 624 LKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 624 Lr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~~ 668 (671)
|++||+|++|||++|.++++.+++.+|+..+ +.|.|+|.|+...
T Consensus 149 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 149 LQIGDKILAVNSVGLEDVMHEDAVAALKNTY-DVVYLKVAKPSNA 192 (196)
T ss_dssp CCTTCEEEEETTEECSSCBHHHHHHHHHSCC-EEEEEEEEEESCC
T ss_pred CCCCCEEEEECCCcCCCCCHHHHHHHHHcCC-CeEEEEEeCCCCc
Confidence 9999999999999999999999999999874 7899999987643
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.92 E-value=8.1e-24 Score=208.04 Aligned_cols=179 Identities=20% Similarity=0.343 Sum_probs=147.9
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccC--CCHHHHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRG--LTMTQAKSII 463 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~--~s~~~av~~L 463 (671)
.....|.|.+. ..+|||+|.++.+...+ .|++|..|.++|||+++|.|++||+|++|||+.+.+ +++.+++.++
T Consensus 17 ~~~~~v~~~~~--~~~lG~~i~~g~~~~~~--~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 92 (206)
T 3r0h_A 17 NKKILIELKVE--KKPMGVIVCGGKNNHVT--TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLF 92 (206)
T ss_dssp TSCEEEEEECT--TSCCCEEEECCSSSSCC--SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHH
T ss_pred CCEEEEEEEeC--CCCcCEEEecccCCCCC--CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHH
Confidence 35577888885 48999999988765321 489999999999999998899999999999999999 9999999999
Q ss_pred hcCCCe-EEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhcc
Q psy1156 464 SSGPLN-MDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAI 542 (671)
Q Consensus 464 ~~~g~~-V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v 542 (671)
+..+.. +.|+|.|.+....
T Consensus 93 ~~~~~~~v~l~v~R~~~~~~------------------------------------------------------------ 112 (206)
T 3r0h_A 93 HTTYEKAVTLTVFRADPPEL------------------------------------------------------------ 112 (206)
T ss_dssp HSCCSSEEEEEEECCSSCCE------------------------------------------------------------
T ss_pred HhcCCCceEEEEEecccCCC------------------------------------------------------------
Confidence 987777 9999988643100
Q ss_pred cccCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhC
Q psy1156 543 ISTGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDG 622 (671)
Q Consensus 543 ~s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraG 622 (671)
....+.+.+.. ..+|||.+.+.. .|++|.+|.++|+|+++|
T Consensus 113 --------------------------------~~~~v~l~~~~-~~~lG~~~~~~~------~gv~V~~V~~gs~A~~aG 153 (206)
T 3r0h_A 113 --------------------------------EKFNVDLMKKA-GKELGLSLSPNE------IGCTIADLIQGQYPEIDS 153 (206)
T ss_dssp --------------------------------EEEEEEEECCT-TCCCCEEEEECS------SCEEEEEECTTSCHHHHH
T ss_pred --------------------------------cEEEEEEecCC-CCccCeEEEcCC------ceEEEEEECCCChHHHcC
Confidence 01233444432 257999998543 489999999999999999
Q ss_pred CCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCCC
Q psy1156 623 RLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 623 rLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~~ 668 (671)
+|++||+|++|||++|.++++.+++.+|+..+ +.|.|+|.|....
T Consensus 154 ~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~L~V~R~~~~ 198 (206)
T 3r0h_A 154 KLQRGDIITKFNGDALEGLPFQVCYALFKGAN-GKVSMEVTRPKPT 198 (206)
T ss_dssp HCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEECCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCCC
Confidence 99999999999999999999999999999874 7899999997654
No 3
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.91 E-value=7.2e-23 Score=201.11 Aligned_cols=192 Identities=24% Similarity=0.354 Sum_probs=151.5
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhc-CCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKE-GCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~ra-G~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
.+.+.|.|.+. .+++|||+|.++.+.. .+++|..|.++|||+++ | |++||+|++|||+.+.+++|.++..+++
T Consensus 6 ~~~~~v~l~~~-~~~~lG~~i~~~~~~~----~~~~V~~v~~~spA~~agg-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (200)
T 2qt5_A 6 KGSTVVELMKK-EGTTLGLTVSGGIDKD----GKPRVSNLRQGGIAARSDQ-LDVGDYIKAVNGINLAKFRHDEIISLLK 79 (200)
T ss_dssp EEEEEEEEECC-TTCCCCEEEECCTTSS----SCSEEEEECTTSHHHHTTS-CCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCCEEEEEEeC-CCCCCCEEEecccCCC----CCeEEEEECCCChHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 35678888875 4799999999876543 67999999999999999 6 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhcccc
Q psy1156 465 SGPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAIIS 544 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~s 544 (671)
..+..|.|+|.|....... + .
T Consensus 80 ~~g~~v~l~v~R~~~~~~~----------------------~-----------g-------------------------- 100 (200)
T 2qt5_A 80 NVGERVVLEVEYELPPVSI----------------------Q-----------G-------------------------- 100 (200)
T ss_dssp TCCSEEEEEEEEECCCCCC----------------------C-----------C--------------------------
T ss_pred hCCCeEEEEEeccCCCccc----------------------C-----------C--------------------------
Confidence 8889999999885421000 0 0
Q ss_pred cCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCC-CCcceeEEEeCCCCHHhHhCC
Q psy1156 545 TGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPR-GAIGIFIKSILDNGQAAEDGR 623 (671)
Q Consensus 545 ~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~-g~~GVfIssV~pgSpAaraGr 623 (671)
. ........|.+.+.. ..|||.+.++..... ...|++|..|.++|+|+++|+
T Consensus 101 ------~-------------------~~~~~~~~v~l~~~~--~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~ 153 (200)
T 2qt5_A 101 ------S-------------------SVMFRTVEVTLHKEG--NTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGT 153 (200)
T ss_dssp ------S-------------------SEEEEEEEEEEECBT--TBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCC
T ss_pred ------C-------------------ccceeEEEEEEecCC--CCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCC
Confidence 0 000012245555443 789999987654211 135899999999999999999
Q ss_pred CCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCCCCC
Q psy1156 624 LKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLKSKK 670 (671)
Q Consensus 624 Lr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~~~~ 670 (671)
|++||+|++|||++|.++++.+++.+|+.. ...|.|+|.|+.+..+
T Consensus 154 l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 154 IKPGDRLLSVDGIRLLGTTHAEAMSILKQC-GQEATLLIEYDVSVMD 199 (200)
T ss_dssp CCTTCEEEEETTEECTTCCHHHHHHHHHTT-CSEEEEEEEEEEEC--
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCccCC
Confidence 999999999999999999999999999984 4789999999876543
No 4
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.88 E-value=2e-21 Score=225.86 Aligned_cols=186 Identities=28% Similarity=0.477 Sum_probs=154.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
....+.|.|.+.. ++|||+|.||.+... +...|++|..|.+||||+++|+|++||+|++|||+.|.+++|.+++.+|
T Consensus 57 ~~~~~~v~l~k~~--~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 134 (721)
T 2xkx_A 57 EMEYEEITLERGN--SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEAL 134 (721)
T ss_pred CceEEEEEEEeCC--CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHh
Confidence 4566889998865 799999999876532 1127899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhccc
Q psy1156 464 SSGPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAII 543 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~ 543 (671)
+.++..|.|+|.|.+....
T Consensus 135 ~~~g~~v~l~v~R~~~~~~------------------------------------------------------------- 153 (721)
T 2xkx_A 135 KEAGSIVRLYVMRRKPPAE------------------------------------------------------------- 153 (721)
T ss_pred hccccccceEEEecccccc-------------------------------------------------------------
Confidence 9888899999987542000
Q ss_pred ccCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCC--CCCcceeEEEeCCCCHHhHh
Q psy1156 544 STGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSP--RGAIGIFIKSILDNGQAAED 621 (671)
Q Consensus 544 s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~--~g~~GVfIssV~pgSpAara 621 (671)
....|+|.+.. .+|||++.++.+.. .+..|++|..|.++|+|+++
T Consensus 154 -------------------------------~~~~v~l~k~~--~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~a 200 (721)
T 2xkx_A 154 -------------------------------KVMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKD 200 (721)
T ss_pred -------------------------------cceeeeeeeec--CCCceeeccCCCccccCCCCceEEEEeCCCCchhhc
Confidence 01245555543 67999998875432 23469999999999999999
Q ss_pred CCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 622 GRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 622 GrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
|+|++||+|++|||++|.+++|.+++.+|+..+ ..|.|+|.|+..
T Consensus 201 G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~V~R~g~ 245 (721)
T 2xkx_A 201 GRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY-DVVYLKVAKPSN 245 (721)
T ss_pred CCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC-CeEEEEEEeCCc
Confidence 999999999999999999999999999998875 789999998765
No 5
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.88 E-value=4.2e-21 Score=188.35 Aligned_cols=189 Identities=19% Similarity=0.231 Sum_probs=148.3
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
.+.+.|.|.+. ...+|||.+.++.+.......+++|..|.++|||+++|.|++||+|++|||+.+.++++.++..+|+.
T Consensus 5 ~~~~~v~l~~~-~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 5 TETTEVVLTAD-PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp CEEEEEEEECB-TTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred cEEEEEEEEeC-CCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35678888875 46999999999854322112689999999999999999999999999999999999999999999986
Q ss_pred C--CCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhccc
Q psy1156 466 G--PLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAII 543 (671)
Q Consensus 466 ~--g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~ 543 (671)
. +..+.|+|.|.+..... |..
T Consensus 84 ~~~g~~v~l~v~R~~~~~~~-------------------------------~~~-------------------------- 106 (196)
T 1p1d_A 84 SSITSKVTLEIEFDVAESVI-------------------------------PSS-------------------------- 106 (196)
T ss_dssp CCSSSEEEEEEEECSCSCCB-------------------------------CCS--------------------------
T ss_pred CCCCCeEEEEEEecCCCCCC-------------------------------CCC--------------------------
Confidence 5 67899999986542110 000
Q ss_pred ccCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCC
Q psy1156 544 STGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGR 623 (671)
Q Consensus 544 s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGr 623 (671)
....+.+.+. ....|||.+.+..... ...|++|..|.++|+|+++|+
T Consensus 107 -------------------------------~~~~v~l~~~-~~~~lG~~~~~~~~~~-~~~gv~V~~V~~~s~A~~aG~ 153 (196)
T 1p1d_A 107 -------------------------------GTFHVKLPKK-HSVELGITISSPSSRK-PGDPLVISDIKKGSVAHRTGT 153 (196)
T ss_dssp -------------------------------SCEEEEECCC-SSCCCCCEEECSCSSS-TTCCCEEEECCSSSHHHHTSC
T ss_pred -------------------------------CcEEEEecCC-CCCCcCEEEECCCCCC-CCCCEEEEEECCCCcHHhcCC
Confidence 0012333322 1256899988754321 135899999999999999999
Q ss_pred CCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCC
Q psy1156 624 LKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRL 666 (671)
Q Consensus 624 Lr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~ 666 (671)
|++||+|++|||+++.++++.+++++|+.. ...|.|+|.|+.
T Consensus 154 l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 154 LELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp CCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 999999999999999988899999999987 588999998864
No 6
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.84 E-value=9.2e-20 Score=211.88 Aligned_cols=237 Identities=26% Similarity=0.360 Sum_probs=156.0
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCC--CCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSS--EGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~--~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+.|+|.+. ..+|||++.++.... .+. .|++|..|.+||||+++|+|++||+|++|||+.|.++++.+++.+++
T Consensus 154 ~~~~v~l~k~--~~~lG~~i~~~~~~~~~~~~-~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 230 (721)
T 2xkx_A 154 KVMEIKLIKG--PKGLGFSIAGGVGNQHIPGD-NSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALK 230 (721)
T ss_pred cceeeeeeee--cCCCceeeccCCCccccCCC-CceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHH
Confidence 4567888764 367999998765321 112 68999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhcccc
Q psy1156 465 SGPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAIIS 544 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~s 544 (671)
..+..|.|+|.|.+....... ...+.. ....+...... ..+.. ... .... .....
T Consensus 231 ~~~~~v~l~V~R~g~~~~~~~--~~~p~~------~~~~s~~~~~~--~~~~~-----~~~--~~~~--------~~~~~ 285 (721)
T 2xkx_A 231 NTYDVVYLKVAKPSNAYLSDS--YAPPDI------TTSYSQHLDNE--ISHSS-----YLG--TDYP--------TAMTP 285 (721)
T ss_pred cCCCeEEEEEEeCCcccccCC--CCCCCc------ccCCCCCcccc--cCCcc-----ccc--cccc--------ccCCC
Confidence 888899999999876432100 000000 00000000000 00000 000 0000 00000
Q ss_pred cCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCC
Q psy1156 545 TGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRL 624 (671)
Q Consensus 545 ~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrL 624 (671)
.. ...... .....+. ........+.|.|.+.. .+|||.|.++.+. .||+|..|.++|+|+++|+|
T Consensus 286 ~~---~~~~~p----~~~~~~~--~~~~~~~~~~v~l~~~~--~~lG~~i~~~~~~----~gv~V~~V~~gs~A~~aG~L 350 (721)
T 2xkx_A 286 TS---PRRYSP----VAKDLLG--EEDIPREPRRIVIHRGS--TGLGFNIVGGEDG----EGIFISFILAGGPADLSGEL 350 (721)
T ss_pred CC---CcccCC----ccccccc--ccccccceEEEEEEECC--CCccEEEeccCCC----CCeEEEEeCCCChHHhcCCC
Confidence 00 000000 0000000 00011235678888875 7899999877542 48999999999999999999
Q ss_pred CCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 625 KEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 625 r~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
++||+|++|||++|.+++|++++.+|+..+ +.|+|+|.|+..
T Consensus 351 ~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~-~~v~L~v~r~~~ 392 (721)
T 2xkx_A 351 RKGDQILSVNGVDLRNASHEQAAIALKNAG-QTVTIIAQYKPE 392 (721)
T ss_pred ccCCEEEEECCEECCCCCHHHHHHHHHhcC-CeEEEEEEeCch
Confidence 999999999999999999999999999874 789999998764
No 7
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.79 E-value=1.8e-17 Score=158.50 Aligned_cols=159 Identities=23% Similarity=0.392 Sum_probs=127.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc-
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS- 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~- 465 (671)
+++.|.|.+.. .+.|||.+.... .|++|..|.++|||+++| |++||+|++|||+.+.++++..+..+++.
T Consensus 4 ~~r~v~l~k~~-~~~lG~~~~~~~-------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 74 (166)
T 1w9e_A 4 DPREVILCKDQ-DGKIGLRLKSID-------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQA 74 (166)
T ss_dssp CCEEEEEECCT-TSCCSEEEEEET-------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCEEEEEEeCC-CCcEeEEEEeCC-------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 56889998853 579999998743 689999999999999999 99999999999999999988777777764
Q ss_pred CCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhccccc
Q psy1156 466 GPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAIIST 545 (671)
Q Consensus 466 ~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~s~ 545 (671)
.+..+.|+|.+.+..
T Consensus 75 ~~~~v~l~vr~~~~~----------------------------------------------------------------- 89 (166)
T 1w9e_A 75 FGEKITMTIRDRPFE----------------------------------------------------------------- 89 (166)
T ss_dssp CSSEEEEEEECCTTC-----------------------------------------------------------------
T ss_pred CCCEEEEEEEcCCCc-----------------------------------------------------------------
Confidence 455899999332110
Q ss_pred CCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCC
Q psy1156 546 GSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLK 625 (671)
Q Consensus 546 ~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr 625 (671)
.++.|.+.. ...|||.+.. | +|..|.++|+|+++| |+
T Consensus 90 -------------------------------~~v~l~~~~-~~~lG~~~~~---------g-~v~~v~~~s~a~~aG-l~ 126 (166)
T 1w9e_A 90 -------------------------------RTITMHKDS-TGHVGFIFKN---------G-KITSIVKDSSAARNG-LL 126 (166)
T ss_dssp -------------------------------EEEEEECCT-TSCCSEEEET---------T-EEEEECTTSHHHHTT-CC
T ss_pred -------------------------------EEEEEecCC-CCcEeEEEeC---------C-EEEEEccCCHHHHcC-CC
Confidence 012222111 2568998871 4 899999999999999 99
Q ss_pred CCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEE
Q psy1156 626 EGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHIC 663 (671)
Q Consensus 626 ~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~ 663 (671)
+||+|++|||.++.++.+.++...++..+ ..+.|.|.
T Consensus 127 ~GD~I~~ing~~v~~~~~~~v~~~v~r~g-~~~~l~v~ 163 (166)
T 1w9e_A 127 TEHNICEINGQNVIGLKDSQIADILSTSG-TVVTITIM 163 (166)
T ss_dssp SSEEEEEETTEECTTCCHHHHHHHHHHSC-SEEEEEEE
T ss_pred CCCEEEEECCEECCCCChHHHHHHHhhCC-CEEEEEEE
Confidence 99999999999999999999988888764 67777764
No 8
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.79 E-value=4.5e-20 Score=200.16 Aligned_cols=170 Identities=25% Similarity=0.427 Sum_probs=75.1
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....+.|.|.+. .+++|||.|.+... .. ...|++|..|.+||||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 202 ~~~~~~V~i~k~-~ge~lG~~i~~~~~-g~-~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~ 278 (388)
T 3suz_A 202 SENCKELQLEKH-KGEILGVVVVESGW-GS-ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIK 278 (388)
T ss_dssp SSCCEEEEECCC-SSCCCCCCCBCC----C-CSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTT
T ss_pred cccceEEEEECC-CCCceeEEEEecCC-CC-cCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 456789999885 36899999987431 11 1256999999999999999999999999999999999999999999998
Q ss_pred cC--CCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhcc
Q psy1156 465 SG--PLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAI 542 (671)
Q Consensus 465 ~~--g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v 542 (671)
.. +..+.|+|.|.+....
T Consensus 279 ~~~~~~~v~l~v~r~~~~~~------------------------------------------------------------ 298 (388)
T 3suz_A 279 GLKNQTQVKLNIVSCPPVTT------------------------------------------------------------ 298 (388)
T ss_dssp TCTTCSCEEEEEEECCSCC-------------------------------------------------------------
T ss_pred hccCCCccccccccccccce------------------------------------------------------------
Confidence 64 4569999987532100
Q ss_pred cccCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhC
Q psy1156 543 ISTGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDG 622 (671)
Q Consensus 543 ~s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraG 622 (671)
+.+........|||.+.++ +|..|.++|+|+++|
T Consensus 299 ------------------------------------v~l~~~~~~~~lG~~i~~g----------~I~~V~~gs~A~~aG 332 (388)
T 3suz_A 299 ------------------------------------VLIKRPDLKYQLGFSVQNG----------IICSLMRGGIAERGG 332 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------eeEeecCCCCccceEEecC----------EEEEeecCCHHHHcC
Confidence 0010001124688887642 899999999999999
Q ss_pred CCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeC
Q psy1156 623 RLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRR 665 (671)
Q Consensus 623 rLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr 665 (671)
|++||+|++|||++|.+++|++++.+|+..+ +.|.|+|.+.
T Consensus 333 -L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~-~~v~L~V~p~ 373 (388)
T 3suz_A 333 -VRVGHRIIEINGQSVVATAHEKIVQALSNSV-GEIHMKTMPA 373 (388)
T ss_dssp -------------------------------------------
T ss_pred -CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEec
Confidence 9999999999999999999999999999875 7888888554
No 9
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.71 E-value=1e-16 Score=159.56 Aligned_cols=153 Identities=20% Similarity=0.189 Sum_probs=109.8
Q ss_pred CcEEEEEEcCCChhhhcCCCCCC-CEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCCcccccccccccccccccc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELG-DEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTSLKKSNAENEYNESHSREK 496 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~G-D~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~ 496 (671)
.|++|..|.++|||+++| |++| |+|++|||+.+..+.......+....+..+.|+|.|.+........
T Consensus 16 ~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~---------- 84 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETS---------- 84 (209)
T ss_dssp EEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEE----------
T ss_pred CEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEE----------
Confidence 789999999999999999 9999 9999999999998766544333335678999999986532111000
Q ss_pred cccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhcccccCCCCCchhhhhhccCCccCCCCCCCCcccce
Q psy1156 497 KSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAIISTGSISGDEEETILTSTNFCTLPRRPRSAICTF 576 (671)
Q Consensus 497 ~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~ 576 (671)
+ . |...
T Consensus 85 ---l------------------------------------------~----------------------p~~~------- 90 (209)
T 3rle_A 85 ---V------------------------------------------T----------------------PSNL------- 90 (209)
T ss_dssp ---E------------------------------------------C----------------------CCSS-------
T ss_pred ---E------------------------------------------c----------------------cccc-------
Confidence 0 0 0000
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCC-CCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKE-GDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~-GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.. ....||+.+...........|++|..|.++|||+++| |++ ||+|++|||. +. ++.++..+|+..+.
T Consensus 91 -----~~--~~~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g 159 (209)
T 3rle_A 91 -----WG--GQGLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MN--ESEDLFSLIETHEA 159 (209)
T ss_dssp -----SS--SSSSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CC--SSSCHHHHHHHTTT
T ss_pred -----cc--ccCccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eC--CHHHHHHHHHhCCC
Confidence 00 0145777776322211112589999999999999999 999 9999999998 75 55677777777655
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 160 ~~v~l~v~r~~ 170 (209)
T 3rle_A 160 KPLKLYVYNTD 170 (209)
T ss_dssp SCEEEEEEETT
T ss_pred CeEEEEEEECC
Confidence 78999998865
No 10
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.68 E-value=2.5e-16 Score=173.17 Aligned_cols=192 Identities=18% Similarity=0.223 Sum_probs=126.4
Q ss_pred ccchhccccCCCCCCCCeEEEEEEeCC--CCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCC
Q psy1156 371 MEISELSSENSEDSQEGQTMVRVNRRD--FNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNG 448 (671)
Q Consensus 371 ~~~v~~~~~~~~~~~~~~~~V~L~k~~--~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG 448 (671)
.+....++...+...+++..|.+..-. ....||+... .|++|..|.++|||+++| |++||+|++|||
T Consensus 224 ~~~~~~~l~~~g~v~r~~lGv~~~~~~~~~a~~~gl~~~----------~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG 292 (436)
T 4a8c_A 224 ARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQ----------RGAFVSEVLPGSGSAKAG-VKAGDIITSLNG 292 (436)
T ss_pred HHHHHHHHHhccccccccCceEecccCHHHHHHhCCCCC----------cceEEEEECCCChHHHCC-CCCCCEEEEECC
Confidence 344444455555566667777665421 1233444221 689999999999999999 999999999999
Q ss_pred eeccCCCHHHHHHHHh--cCCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhc
Q psy1156 449 QRLRGLTMTQAKSIIS--SGPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLF 526 (671)
Q Consensus 449 ~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~ 526 (671)
+.|.++. ++...+. ..+..+.|+|.|++........ +... +...
T Consensus 293 ~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~-------------l~~~-----------~~~~-------- 338 (436)
T 4a8c_A 293 KPLNSFA--ELRSRIATTEPGTKVKLGLLRNGKPLEVEVT-------------LDTS-----------TSSS-------- 338 (436)
T ss_pred EECCCHH--HHHHHHHhcCCCCEEEEEEEECCEEEEEEEE-------------ECCC-----------Cccc--------
Confidence 9998764 4444443 4578999999998763222000 0000 0000
Q ss_pred cccccccchhhhhhcccccCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCCC--CCCC
Q psy1156 527 QKNCHSINNKLLRKAIISTGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKDS--PRGA 604 (671)
Q Consensus 527 q~~~~s~~~~~~r~~v~s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~ds--~~g~ 604 (671)
. .. . ...+|+........ ....
T Consensus 339 ------------------------~----------------~~--------------~--~~~~gl~~~~~~~~~~~~~~ 362 (436)
T 4a8c_A 339 ------------------------A----------------SA--------------E--MITPALEGATLSDGQLKDGG 362 (436)
T ss_pred ------------------------c----------------cc--------------c--ccccCceeeecccccccCCC
Confidence 0 00 0 00122222111100 0112
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||++|. ++.+++++|+..+ +.|.|+|.|+..
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l~~~~-~~v~l~v~R~g~ 421 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVLAAKP-AIIALQIVRGNE 421 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCC-CeEEEEEEECCE
Confidence 489999999999999999 9999999999999998 7899999999864 689999998754
No 11
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.58 E-value=1.7e-15 Score=167.27 Aligned_cols=198 Identities=16% Similarity=0.195 Sum_probs=126.3
Q ss_pred ccchhccccCCCCCCCCeEEEEEEeCC--CCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCC
Q psy1156 371 MEISELSSENSEDSQEGQTMVRVNRRD--FNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNG 448 (671)
Q Consensus 371 ~~~v~~~~~~~~~~~~~~~~V~L~k~~--~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG 448 (671)
.+....++...+...++|..|.++.-. ....||+.. . ..|++|..|.++|||+++| |++||+|++|||
T Consensus 242 ~~~~~~~l~~~g~v~r~~lGv~~~~~~~~~a~~~gl~~--------~-~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG 311 (451)
T 3pv2_A 242 VKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPE--------D-FQGALVSQVNPNSPAELAG-LKAGDIITQIND 311 (451)
T ss_dssp HHHHHHHHHHHSSCCCCBCCEEEEECCHHHHHHTTSCT--------T-CCCEEEEEECTTSHHHHHT-CCTTCEEEEETT
T ss_pred HHHHHHHHHhcCCcccccccceEEeccHHHHHhcCCCc--------C-CceEEEEecCCCChHHHcC-CCCCCEEEEECC
Confidence 344444455555666777777765422 112334310 0 0589999999999999999 999999999999
Q ss_pred eeccCCCHHHHHHHHh--cCCCeEEEEEEeCCcccccccccccccccccccccccccccccCCcccCCcccchhhhhhhc
Q psy1156 449 QRLRGLTMTQAKSIIS--SGPLNMDLLISRTSLKKSNAENEYNESHSREKKSKETRFSLDKQNDFESSNEQDKNNQKRLF 526 (671)
Q Consensus 449 ~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~ 526 (671)
+.|.++ .++...+. ..+..+.|+|.|++........ .. .... .
T Consensus 312 ~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~-------------l~-------------~~~~----~--- 356 (451)
T 3pv2_A 312 TKITQA--TQVKTTISLLRVGSTVKIIVERDNKPLTLSAV-------------VT-------------DIKS----H--- 356 (451)
T ss_dssp EECCSH--HHHHHHHHTSCTTCEEEEEEEETTEEEEEEEE-------------CB-------------CHHH----H---
T ss_pred EEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE-------------Ec-------------cCCc----c---
Confidence 999865 44445554 4678999999998764322000 00 0000 0
Q ss_pred cccccccchhhhhhcccccCCCCCchhhhhhccCCccCCCCCCCCcccceeeEEEeeCCCCCcccEEEecCCC-CCCCCc
Q psy1156 527 QKNCHSINNKLLRKAIISTGSISGDEEETILTSTNFCTLPRRPRSAICTFHTIVFEKGPGKKGLGFTIVGGKD-SPRGAI 605 (671)
Q Consensus 527 q~~~~s~~~~~~r~~v~s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~~~~V~L~K~~g~~~LGfsL~Gg~d-s~~g~~ 605 (671)
... .... .....+++|....... ......
T Consensus 357 ------------~~~------------~~~~--------------------------~~~~~G~~l~~~~~~~~~~~~~~ 386 (451)
T 3pv2_A 357 ------------EQK------------LQSN--------------------------NPFLYGLALRAFEQESPPHGNVI 386 (451)
T ss_dssp ------------HHH------------HHHH--------------------------STTTTTEEEEEEEEECTTSCEEE
T ss_pred ------------ccc------------cccc--------------------------cccccccccccCChhHhcccCCC
Confidence 000 0000 0000112222111000 001124
Q ss_pred ceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 606 GIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 606 GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
|++|..|.++|+|+++| |++||+|++|||++|. +.+++.++|+.. ...+.|+|.|+..
T Consensus 387 Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l~~~-~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 387 GVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIAQEK-KKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHTTSS-CSCEEEEEEETTE
T ss_pred ceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhcC-CCeEEEEEEECCE
Confidence 89999999999999999 9999999999999998 679999999885 4789999998753
No 12
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.55 E-value=2.3e-14 Score=132.37 Aligned_cols=93 Identities=31% Similarity=0.550 Sum_probs=80.9
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
...+.|.|.+.. .+|||.|.++.+.+.+..|+||..|.++|+|+++|+|++||+|++|||++|.+++|.+++.+|+..
T Consensus 28 ~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 28 ATVCTVTLEKMS--AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp EEEEEEEEETTS--SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CcEEEEEEEcCC--CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 466788998875 799999999887554456899999999999999955999999999999999999999999999998
Q ss_pred CCCcEEEEEEeCCCC
Q psy1156 654 KNGSISLHICRRLKS 668 (671)
Q Consensus 654 g~~~VtL~V~Rr~~~ 668 (671)
+...|.|+|.|+...
T Consensus 106 ~~~~v~l~v~r~~~~ 120 (130)
T 1i16_A 106 PDGPVTIVIRRKSLQ 120 (130)
T ss_dssp CSSEEEEEEEEESSC
T ss_pred CCceEEEEEEeCCCC
Confidence 655699999887543
No 13
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.52 E-value=6.6e-14 Score=127.70 Aligned_cols=91 Identities=27% Similarity=0.474 Sum_probs=80.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||+|.++.+...+..|++|..|.++|+|+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 24 ~~~~v~l~k~~-~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~ 102 (118)
T 3b76_A 24 HEKVVNIQKDP-GESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTS 102 (118)
T ss_dssp EEEEEEEECCT-TCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCC
T ss_pred CcEEEEEEeCC-CCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678888775 48999999999876555679999999999999999999999999999999999999999999999885
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
+.|.|+|.|...
T Consensus 103 -~~v~L~v~R~~~ 114 (118)
T 3b76_A 103 -SSIVLKALEVKE 114 (118)
T ss_dssp -SEEEEEEEEEEE
T ss_pred -CeEEEEEEECCC
Confidence 789999988653
No 14
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.52 E-value=9.3e-14 Score=122.61 Aligned_cols=87 Identities=25% Similarity=0.282 Sum_probs=76.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.. ++|||+|.++.. ..+||++|.++|+|++.|.|++||+|++|||++|.+++|.+++++|++++
T Consensus 5 ~~k~V~l~K~~--~~LG~tI~~~g~-----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~ 77 (95)
T 3gge_A 5 IEKEVNVYKSE--DSLGLTITDNGV-----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELK 77 (95)
T ss_dssp EEEEEEEECCS--SCCCEEEECSSS-----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred eEEEEEEEECC--CCceEEEEcCCC-----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCC
Confidence 45789999976 899999986422 35899999999999999999999999999999999999999999999986
Q ss_pred C-CcEEEEEEeCCCC
Q psy1156 655 N-GSISLHICRRLKS 668 (671)
Q Consensus 655 ~-~~VtL~V~Rr~~~ 668 (671)
. .+++|++.+..+.
T Consensus 78 ~g~~~~L~lv~p~~~ 92 (95)
T 3gge_A 78 KEELFTMKLIEPKKS 92 (95)
T ss_dssp TTCEEEEEEEEECSC
T ss_pred CCCEEEEEEECcccc
Confidence 4 4699999988765
No 15
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.50 E-value=9e-14 Score=124.07 Aligned_cols=91 Identities=27% Similarity=0.462 Sum_probs=79.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC-CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR-GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~-g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.|.. .+|||+|.++.+... ...|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..
T Consensus 15 ~~~~v~l~k~~--~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (108)
T 2d92_A 15 EVKIVELVKDC--KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV 92 (108)
T ss_dssp SCEEEEEEECS--SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS
T ss_pred ceEEEEEEECC--CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45689999986 799999998765321 346899999999999999999999999999999999999999999999997
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
+.+.|.|+|.|...
T Consensus 93 ~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 93 PPGLVHLGICSGPS 106 (108)
T ss_dssp CSEEEEEEEECCCC
T ss_pred CCCeEEEEEEcCCC
Confidence 55689999988764
No 16
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.50 E-value=1.3e-13 Score=118.61 Aligned_cols=78 Identities=27% Similarity=0.367 Sum_probs=69.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.|.+ .++|||++.++ +|.+|.++|||+++| |++||+|++|||++|.+++|++++++|++.+
T Consensus 4 ~~r~v~l~k~~-~g~~Gf~i~~g----------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g 71 (82)
T 1r6j_A 4 DPRTITMHKDS-TGHVGFIFKNG----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG 71 (82)
T ss_dssp CCEEEEEECCT-TSCCCEEEETT----------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred ceEEEEEEECC-CCCeEEEEECC----------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 35789999986 36799999864 588999999999999 9999999999999999999999999999764
Q ss_pred CCcEEEEEEeC
Q psy1156 655 NGSISLHICRR 665 (671)
Q Consensus 655 ~~~VtL~V~Rr 665 (671)
..|+|+|...
T Consensus 72 -~~V~L~v~p~ 81 (82)
T 1r6j_A 72 -TVVTITIMPA 81 (82)
T ss_dssp -SEEEEEEEEC
T ss_pred -CEEEEEEEeC
Confidence 7899999753
No 17
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.50 E-value=5.3e-14 Score=128.45 Aligned_cols=92 Identities=35% Similarity=0.612 Sum_probs=77.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.. ..+|||+|.++.+.+.+..|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..+
T Consensus 24 ~~~~v~l~k~~-~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 24 GLRTVEMKKGP-TDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp -CEEEEEEC-----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CcEEEEEEcCC-CCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45789999886 36999999998764444468999999999999999559999999999999999999999999999985
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
+.|.|+|.|....
T Consensus 103 -~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 103 -GSIEMQVVAGGDV 115 (120)
T ss_dssp -SEEEEEEECCTTS
T ss_pred -CeEEEEEEECCcc
Confidence 7899999997654
No 18
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=6.7e-14 Score=127.21 Aligned_cols=90 Identities=44% Similarity=0.846 Sum_probs=79.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.. .+|||+|.++.+.+.+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 25 ~~~~v~L~k~~--~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 102 (117)
T 2fne_A 25 QCKSITLERGP--DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK 102 (117)
T ss_dssp EEEEEEECCBT--TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred ccEEEEEEeCC--CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45789999986 7899999998665444468999999999999999999999999999999999999999999999875
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
+.|.|+|.|+..
T Consensus 103 -~~v~l~v~R~g~ 114 (117)
T 2fne_A 103 -GTVTLMVLSSDE 114 (117)
T ss_dssp -SSEEEEEEECSC
T ss_pred -CeEEEEEEeCCc
Confidence 679999999764
No 19
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.49 E-value=2.3e-13 Score=122.05 Aligned_cols=89 Identities=29% Similarity=0.516 Sum_probs=78.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
.++.|.+.+. .+|||+|.|+.+.... .|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++++|+..+
T Consensus 15 ~~~~v~l~k~---~glG~~i~gg~~~~~~-~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 15 AFRVITVTKE---TGLGLKILGGINRNEG-PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp TEEEEEECCS---SCCCEEEEECSSSSSC-SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred cEEEEEEeCC---CccCEEEEeccCCCCC-CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 5678888775 6899999998765422 37999999999999999999999999999999999999999999999986
Q ss_pred ---CCcEEEEEEeCCC
Q psy1156 655 ---NGSISLHICRRLK 667 (671)
Q Consensus 655 ---~~~VtL~V~Rr~~ 667 (671)
...+.|.|.|...
T Consensus 91 ~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 91 LRSESPWEIAFIRSGP 106 (109)
T ss_dssp CSSSSCEEEEEECCCC
T ss_pred cCCCceEEEEEEeCCC
Confidence 6789999998764
No 20
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.49 E-value=3e-13 Score=117.49 Aligned_cols=90 Identities=26% Similarity=0.516 Sum_probs=79.5
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..++|.|.+.. .+|||++.++.+......|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 5 ~~~~v~l~k~~--~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 5 DIFEVELAKND--NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp CEEEEEEECSS--SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CEEEEEEEeCC--CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45688998875 8999999998776545569999999999999999999999999999999999999999999999864
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+..
T Consensus 83 -~~v~l~v~R~~~ 94 (96)
T 1d5g_A 83 -QVVHLLLEKGQS 94 (96)
T ss_dssp -SEEEEEEECCSC
T ss_pred -CeEEEEEEcCCC
Confidence 789999988754
No 21
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.49 E-value=1.9e-13 Score=121.52 Aligned_cols=92 Identities=30% Similarity=0.574 Sum_probs=80.1
Q ss_pred ceeeEEEeeCCCCCcccEEEec---CCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVG---GKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~G---g~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
..+.|.|.+.. .+|||.|.+ +.+......|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++
T Consensus 9 ~~~~v~l~k~~--~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 9 ELFPVELEKDE--DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp EEEEEEEECBT--TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred eEEEEEEEECC--CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 55678888875 799999998 5554444579999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCCCC
Q psy1156 652 TIKNGSISLHICRRLKSK 669 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~~~ 669 (671)
..+ ..|.|+|.|+....
T Consensus 87 ~~~-~~v~l~v~R~~~~~ 103 (107)
T 1wf8_A 87 NTK-GNVRFVIGREKPSG 103 (107)
T ss_dssp HCC-SEEEEEEEEECCCS
T ss_pred cCC-CeEEEEEEeCCCCC
Confidence 874 78999999987543
No 22
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.49 E-value=2.9e-13 Score=119.03 Aligned_cols=92 Identities=37% Similarity=0.617 Sum_probs=80.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
..+.|.|.+.. .+|||+|.++.+.+. +..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~~--~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 4 KYEEIVLERGN--SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEEECBT--TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred eEEEEEEEECC--CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45688998875 799999999876532 34699999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCCCCC
Q psy1156 653 IKNGSISLHICRRLKSK 669 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~~~ 669 (671)
.+ ..|.|+|.|+....
T Consensus 82 ~g-~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 82 AG-PVVRLVVRRRQPPP 97 (102)
T ss_dssp SC-SEEEEEEEEECCCC
T ss_pred CC-CeEEEEEEeCCCCC
Confidence 64 78999999987643
No 23
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.49 E-value=2.6e-13 Score=117.28 Aligned_cols=89 Identities=37% Similarity=0.649 Sum_probs=78.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC--CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP--RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~--~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
..+.|+|.+.. .+|||+|.++.+.+ .+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~~--~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 3 TIMEVNLLKGP--KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp CEEEEEEECCT--TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46789999886 78999999987643 234689999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCC
Q psy1156 653 IKNGSISLHICRRL 666 (671)
Q Consensus 653 sg~~~VtL~V~Rr~ 666 (671)
.+ +.|.|+|.|+.
T Consensus 81 ~~-~~v~l~v~R~g 93 (94)
T 2fe5_A 81 TS-DMVYLKVAKPG 93 (94)
T ss_dssp CC-SEEEEEEECCC
T ss_pred CC-CeEEEEEEcCC
Confidence 75 68999998864
No 24
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=126.72 Aligned_cols=93 Identities=33% Similarity=0.534 Sum_probs=81.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecC-CCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCH-DLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~-~lSheEAV~lLK~s 653 (671)
..+.|.|.+.. ..+|||.|.++.+...+..|++|..|.++|||+++|+|++||+|++|||++|. +++|.+++.+|+..
T Consensus 25 ~~~~v~l~k~~-~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 25 QIEYIDIERPS-TGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp EEEEEEEECCS-SSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred ceEEEEEEECC-CCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 45688998886 37999999988776555569999999999999999999999999999999997 99999999999986
Q ss_pred CCCcEEEEEEeCCCCC
Q psy1156 654 KNGSISLHICRRLKSK 669 (671)
Q Consensus 654 g~~~VtL~V~Rr~~~~ 669 (671)
+ ..|.|+|.|+....
T Consensus 104 ~-~~v~l~v~r~~~~~ 118 (128)
T 2db5_A 104 T-GSLRLIVAREPVHT 118 (128)
T ss_dssp C-SEEEEEEEECCCSS
T ss_pred C-CeEEEEEEcCCCCC
Confidence 4 78999999987543
No 25
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.48 E-value=2.7e-13 Score=120.08 Aligned_cols=91 Identities=34% Similarity=0.628 Sum_probs=79.5
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC--CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP--RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~--~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
..+.|.|.|.. .+|||+|.++.+.+ .+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 3 KIMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp CEEEEEEECBT--TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred eEEEEEEEECC--CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 45688999887 79999999987643 234589999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCCCC
Q psy1156 653 IKNGSISLHICRRLKS 668 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~~ 668 (671)
.+ ..|.|+|.|+...
T Consensus 81 ~~-~~v~l~v~R~~~~ 95 (105)
T 2awx_A 81 TS-DFVYLKVAKPTSM 95 (105)
T ss_dssp CC-SEEEEEEECCCC-
T ss_pred CC-CeEEEEEEcCCCC
Confidence 74 7899999998754
No 26
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.48 E-value=3.5e-13 Score=118.24 Aligned_cols=91 Identities=46% Similarity=0.775 Sum_probs=79.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
..+.|.|.+.. .+|||+|.++.+.+. ...|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++.
T Consensus 7 ~~~~v~l~~~~--~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 84 (101)
T 2jik_A 7 TEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 84 (101)
T ss_dssp EEEEEEEECCT--TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT
T ss_pred ccEEEEEEeCC--CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 56789999876 899999999876532 24589999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCCCC
Q psy1156 653 IKNGSISLHICRRLKS 668 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~~ 668 (671)
.+ ..|.|+|.|+...
T Consensus 85 ~g-~~v~l~v~R~~~~ 99 (101)
T 2jik_A 85 AG-YAVSLRVQHRLES 99 (101)
T ss_dssp CC-SEEEEEEEEESCC
T ss_pred CC-CeEEEEEEeCCCC
Confidence 74 7899999987653
No 27
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.48 E-value=3.7e-13 Score=116.80 Aligned_cols=89 Identities=31% Similarity=0.447 Sum_probs=77.9
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.....+|||.+.++.+. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 78 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDE----PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASG 78 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSS----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred EEEEEEEEECCCCCcccEEEEeccCC----CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45689999875457899999887653 48999999999999999999999999999999999999999999998874
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|+...
T Consensus 79 -~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 79 -ERVNLTIARPGKP 91 (95)
T ss_dssp -SEEEEEEEEESCS
T ss_pred -CEEEEEEEcCCcC
Confidence 7899999997653
No 28
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.47 E-value=1.3e-13 Score=123.19 Aligned_cols=91 Identities=31% Similarity=0.545 Sum_probs=77.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI- 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s- 653 (671)
..++|.|.+.. ..+|||+|.++.+. .+..|++|.+|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..
T Consensus 5 ~~~~v~l~k~~-~~~lG~~i~g~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 82 (108)
T 3cbz_A 5 NIITVTLNMEK-YNFLGISIVGQSNE-RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIV 82 (108)
T ss_dssp CEEEEEECHHH-HCCCCEEEEEECSS-TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHH
T ss_pred eEEEEEEEeCC-CCccCEEEEcCcCC-CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 45678888753 37899999987653 2346899999999999999999999999999999999999999999999987
Q ss_pred -CCCcEEEEEEeCCC
Q psy1156 654 -KNGSISLHICRRLK 667 (671)
Q Consensus 654 -g~~~VtL~V~Rr~~ 667 (671)
+.+.|.|+|.|+..
T Consensus 83 ~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 83 HKPGPIVLTVAKSGG 97 (108)
T ss_dssp TSSSCEEEEEECCCC
T ss_pred cCCCeEEEEEEeCCC
Confidence 33579999999764
No 29
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=4.2e-13 Score=119.67 Aligned_cols=89 Identities=33% Similarity=0.578 Sum_probs=79.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.|.++.+...+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 8 ~~~~v~l~~~~--~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 8 YVFTVELERGP--SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CEEEEEEECCT--TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred cEEEEEEEECC--CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 56788998876 7999999998776555679999999999999999999999999999999999999999999999874
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 86 -~~v~l~v~R~~ 96 (110)
T 1um1_A 86 -KKMRFLVAKSD 96 (110)
T ss_dssp -SEEEEEEECCC
T ss_pred -CeEEEEEEeCC
Confidence 78999999875
No 30
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=3.2e-13 Score=122.57 Aligned_cols=90 Identities=37% Similarity=0.651 Sum_probs=79.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC--CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP--RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~--~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
..+.|.|.++. .+|||+|.++.+.+ .+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+.
T Consensus 24 ~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 24 TVVEIKLFKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEECBT--TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred ceEEEEEEeCC--CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 56688888875 89999999987643 234689999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCCC
Q psy1156 653 IKNGSISLHICRRLK 667 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~ 667 (671)
.+ ..|.|+|.|+.+
T Consensus 102 ~g-~~v~l~v~R~~~ 115 (117)
T 2byg_A 102 TS-EVVYLKVGKPTT 115 (117)
T ss_dssp CC-SEEEEEEEEEEE
T ss_pred CC-CeEEEEEEeCCc
Confidence 74 789999998753
No 31
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.47 E-value=3.4e-13 Score=119.47 Aligned_cols=90 Identities=28% Similarity=0.558 Sum_probs=77.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
....|+| +.. .+|||+|.++.+......|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 11 ~~~~v~l-~~~--~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 87 (106)
T 3axa_A 11 EIITVTL-KKQ--NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 87 (106)
T ss_dssp CEEEEEE-ECS--SSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred eEEEEEE-CCC--CccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4456777 554 8999999987655445579999999999999999999999999999999999999999999998864
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|+...
T Consensus 88 -~~v~l~v~R~~~~ 100 (106)
T 3axa_A 88 -SVVTLEVAKQGAI 100 (106)
T ss_dssp -SEEEEEEECCCSS
T ss_pred -CeEEEEEEeCCcc
Confidence 7899999997754
No 32
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=5.6e-13 Score=118.46 Aligned_cols=93 Identities=35% Similarity=0.591 Sum_probs=79.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC-----CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP-----RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISL 649 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~-----~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~l 649 (671)
..+.|.|.|.. .+|||+|.++.+.. ....|++|..|.++|||+++|.|++||+|++|||++|.+++|.+++.+
T Consensus 8 ~~~~v~l~k~~--~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~ 85 (107)
T 1uhp_A 8 KSLTLVLHRDS--GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEA 85 (107)
T ss_dssp EEEEEEECCSS--SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEEEeCC--CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45678898874 89999999876531 124689999999999999994499999999999999999999999999
Q ss_pred HHhcCCCcEEEEEEeCCCCCC
Q psy1156 650 FKTIKNGSISLHICRRLKSKK 670 (671)
Q Consensus 650 LK~sg~~~VtL~V~Rr~~~~~ 670 (671)
|+..+ ..|.|+|.|+.+...
T Consensus 86 ~~~~~-~~v~l~v~R~~~~~~ 105 (107)
T 1uhp_A 86 FKTAK-EPIVVQVLRRTSGPS 105 (107)
T ss_dssp HHHCC-SSEEEEEEECCSSCS
T ss_pred HHcCC-CcEEEEEEeCCCCCC
Confidence 99875 789999999886554
No 33
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.46 E-value=6.3e-13 Score=114.54 Aligned_cols=86 Identities=37% Similarity=0.643 Sum_probs=76.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.+.+ ..+|||.+.++.+. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 4 ~~~~v~l~k~~-~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 78 (92)
T 2qg1_A 4 DTLTIGLQKKP-GKGLGLSIVGKRND----TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSL 78 (92)
T ss_dssp CEEEEEEECCT-TSCCSEEEECCSSS----CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred eEEEEEEEeCC-CCcccEEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45688998875 37999999987553 48999999999999999999999999999999999999999999999874
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
+.|.|+|.|+.
T Consensus 79 -~~v~l~v~R~~ 89 (92)
T 2qg1_A 79 -GTVTLEVGRIS 89 (92)
T ss_dssp -SEEEEEEECCC
T ss_pred -CeEEEEEEccc
Confidence 78999998875
No 34
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.46 E-value=4.3e-13 Score=118.79 Aligned_cols=91 Identities=36% Similarity=0.606 Sum_probs=78.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC---CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP---RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~---~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
....|.|.+.. .+|||+|.++.+.+ .+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+
T Consensus 7 ~~~~v~l~~~~--~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 84 (105)
T 1wha_A 7 GRHVACLARSE--RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLT 84 (105)
T ss_dssp EEEEEEECCCT--TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHT
T ss_pred eeEEEEEEeCC--CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45678888775 78999999987643 23468999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCCC
Q psy1156 652 TIKNGSISLHICRRLKS 668 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~~ 668 (671)
..+ ..|.|+|.|+...
T Consensus 85 ~~g-~~v~l~v~R~~~~ 100 (105)
T 1wha_A 85 AAS-PTIALLLEREAGS 100 (105)
T ss_dssp SCC-SCEEEEEEECCCC
T ss_pred cCC-CeEEEEEEECCCC
Confidence 874 7899999998743
No 35
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.45 E-value=2.8e-13 Score=116.27 Aligned_cols=86 Identities=28% Similarity=0.541 Sum_probs=75.4
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.+.. .+|||.+.++.+.. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+.
T Consensus 3 ~~~v~l~~~~--~g~G~~~~~g~~~~---~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2q9v_A 3 EQDIFLWRKE--TGFGFRILGGNEPG---EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAK 77 (90)
T ss_dssp EEEEEEECBT--TBCCEEEEECSSTT---SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred cEEEEEEECC--CccCEEEEccccCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4678898886 78999999876543 479999999999999999999999999999999999999999999988742
Q ss_pred -CcEEEEEEeCC
Q psy1156 656 -GSISLHICRRL 666 (671)
Q Consensus 656 -~~VtL~V~Rr~ 666 (671)
+.|.|+|.|+.
T Consensus 78 ~~~v~l~v~R~~ 89 (90)
T 2q9v_A 78 QGHVNLTVRQTR 89 (90)
T ss_dssp HTEEEEEEEECC
T ss_pred CCeEEEEEEecc
Confidence 37999998863
No 36
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.45 E-value=4e-13 Score=130.21 Aligned_cols=88 Identities=31% Similarity=0.591 Sum_probs=77.2
Q ss_pred ceeeEEEeeCCCCCcccEEEec---CCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVG---GKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~G---g~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
....|.|.++. .+|||+|.+ +.+...+..||||..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+
T Consensus 80 ~~~~v~l~k~~--~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 80 ELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp EEEEEEEECBT--TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred eEEEEEEEeCC--CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 45678888886 789999998 4443334578999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeC
Q psy1156 652 TIKNGSISLHICRR 665 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr 665 (671)
..+ ..|.|+|.|.
T Consensus 158 ~~g-~~v~L~V~R~ 170 (170)
T 3egg_C 158 NTK-GRVRFMIGRE 170 (170)
T ss_dssp HCC-SEEEEEEEEC
T ss_pred cCC-CEEEEEEEeC
Confidence 975 7999999884
No 37
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.45 E-value=3.6e-13 Score=124.71 Aligned_cols=82 Identities=28% Similarity=0.423 Sum_probs=73.6
Q ss_pred CCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeC
Q psy1156 587 KKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRR 665 (671)
Q Consensus 587 ~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr 665 (671)
..+|||.|.++.+...+..|+||..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+.. +...|.|+|.|+
T Consensus 47 ~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 47 GAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 4789999999877665567999999999999999999999999999999999999999999999987 346899999998
Q ss_pred CCC
Q psy1156 666 LKS 668 (671)
Q Consensus 666 ~~~ 668 (671)
.+.
T Consensus 127 g~~ 129 (131)
T 1wfg_A 127 GPS 129 (131)
T ss_dssp CSC
T ss_pred CCC
Confidence 754
No 38
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=5e-13 Score=118.80 Aligned_cols=91 Identities=25% Similarity=0.512 Sum_probs=80.6
Q ss_pred ceeeEEEeeCCCCCcccEEEe-----cCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIV-----GGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISL 649 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~-----Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~l 649 (671)
..+.|.|.+.. .+|||+|. ++.+......|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+
T Consensus 9 ~~~~v~l~k~~--~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 9 DIFEVELAKND--NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SEEEEEEESSS--CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred cEEEEEEEECC--CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 56788998875 79999999 777655455699999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEEeCCCC
Q psy1156 650 FKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 650 LK~sg~~~VtL~V~Rr~~~ 668 (671)
++..+ ..|.|+|.|+...
T Consensus 87 ~~~~g-~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 87 LRNTG-QVVHLLLEKGQSP 104 (108)
T ss_dssp HHHTT-SEEEEEEECCCCS
T ss_pred HHcCC-CeEEEEEEeCCcc
Confidence 99874 8899999998654
No 39
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.45 E-value=3.8e-13 Score=120.51 Aligned_cols=92 Identities=29% Similarity=0.561 Sum_probs=79.2
Q ss_pred ceeeEEEeeCCCCCcccEEEec---CCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVG---GKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~G---g~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
..+.|.|.+.. .+|||+|.+ +.+......|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++
T Consensus 4 ~~~~v~l~k~~--~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (113)
T 2g5m_B 4 ELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 81 (113)
T ss_dssp EEEEEECCCCS--SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHH
T ss_pred EEEEEEEEeCC--CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 45678887765 899999998 5444334569999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCCCC
Q psy1156 652 TIKNGSISLHICRRLKSK 669 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~~~ 669 (671)
..+ ..|.|+|.|+.+..
T Consensus 82 ~~g-~~v~l~v~R~~~~~ 98 (113)
T 2g5m_B 82 NTK-GRVRFMIGRERPGE 98 (113)
T ss_dssp HSC-SSCEEEEEECCCCT
T ss_pred cCC-CeEEEEEEeCCCCC
Confidence 874 78999999987543
No 40
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.44 E-value=9.9e-13 Score=113.07 Aligned_cols=85 Identities=25% Similarity=0.435 Sum_probs=75.0
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.+..+..+|||.|.++... .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 80 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLLE----KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESG 80 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTTS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTST
T ss_pred ceEEEEEEECCCCCCccEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 56789999876556899999987653 489999999999999999 9999999999999999999999999998764
Q ss_pred CCcEEEEEEeC
Q psy1156 655 NGSISLHICRR 665 (671)
Q Consensus 655 ~~~VtL~V~Rr 665 (671)
..|.|+|.|+
T Consensus 81 -~~v~l~v~R~ 90 (91)
T 1m5z_A 81 -NKLDLVISRN 90 (91)
T ss_dssp -TEEEEEEEEC
T ss_pred -CEEEEEEEeC
Confidence 7899999886
No 41
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=1.4e-12 Score=119.08 Aligned_cols=89 Identities=34% Similarity=0.629 Sum_probs=77.9
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
...+.|.|.+.. .+|||.|.++.+. ..|++|..|.++|+|+++|+|++||+|++|||++|.++++.+++.+|+..
T Consensus 18 ~~~~~v~l~~~~--~glG~~~~~g~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 92 (123)
T 1ueq_A 18 GTFLSTTLKKSN--MGFGFTIIGGDEP---DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSV 92 (123)
T ss_dssp SEEEEEEEECCT--TSCSEEEECCSSS---SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTS
T ss_pred CcEEEEEEEeCC--CceeEEEecccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 356678888875 7999999987653 25799999999999999999999999999999999999999999999986
Q ss_pred C-CCcEEEEEEeCCC
Q psy1156 654 K-NGSISLHICRRLK 667 (671)
Q Consensus 654 g-~~~VtL~V~Rr~~ 667 (671)
+ ...|.|+|.|+..
T Consensus 93 ~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 93 PIGQSVNLVLCRGYP 107 (123)
T ss_dssp CTTCEEEEEEEESCC
T ss_pred CCCCeEEEEEEeCCC
Confidence 3 4789999999864
No 42
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=3.2e-13 Score=119.38 Aligned_cols=90 Identities=30% Similarity=0.526 Sum_probs=77.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.|.++.+.. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 9 ~~~~v~l~~~~--~g~G~~i~~g~~~~---~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 83 (103)
T 1uep_A 9 KELDVHLRRME--SGFGFRILGGDEPG---QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA 83 (103)
T ss_dssp EEECCEEESSS--SSCCEEECCCCSTT---SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred eEEEEEEEeCC--CccCEEEeeecCCC---CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45678888864 78999999876532 58999999999999999999999999999999999999999999998863
Q ss_pred -CCcEEEEEEeCCCCC
Q psy1156 655 -NGSISLHICRRLKSK 669 (671)
Q Consensus 655 -~~~VtL~V~Rr~~~~ 669 (671)
...|.|+|.|+....
T Consensus 84 ~g~~v~l~v~R~~~~~ 99 (103)
T 1uep_A 84 RNGQVNLTVRRKVLSG 99 (103)
T ss_dssp HHTEEEEEEEEECCCC
T ss_pred CCCcEEEEEEeCCCCC
Confidence 378999999987543
No 43
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.44 E-value=8.9e-13 Score=113.37 Aligned_cols=83 Identities=27% Similarity=0.497 Sum_probs=72.8
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|+|.|.. .+|||++.++.+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..+
T Consensus 4 ~r~v~l~r~~--~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 75 (91)
T 1g9o_A 4 PRLCCLEKGP--NGYGFHLHGEKGK----LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAAL- 75 (91)
T ss_dssp CEEEEEECBT--TBCCEEEEECTTC----SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS-
T ss_pred cEEEEEEeCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 4689999987 6899999987653 489999999999999999 9999999999999999999999999999875
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
+.+.+++.|+.
T Consensus 76 ~~~~~~~~~r~ 86 (91)
T 1g9o_A 76 NAVRLLVVDPE 86 (91)
T ss_dssp SEEEEEEECCC
T ss_pred CcEEEEEEcCC
Confidence 67766666654
No 44
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=6.6e-13 Score=114.50 Aligned_cols=86 Identities=33% Similarity=0.574 Sum_probs=75.6
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|+|.|.. .+|||.|.++.+.. .|++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+++..+
T Consensus 6 ~r~v~l~k~~--~glG~~l~~~~~~~---~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~- 79 (93)
T 2dkr_A 6 SGVVELPKTD--EGLGFNIMGGKEQN---SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ- 79 (93)
T ss_dssp SCEEEEECCT--TCCCEEEECSSSSS---CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-
T ss_pred CEEEEEEeCC--CCccEEEecccCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 4688998875 89999999876532 58999999999999999669999999999999999999999999999875
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
+.|.|+|.|+..
T Consensus 80 ~~v~l~v~r~~~ 91 (93)
T 2dkr_A 80 GSVKLVVRSGPS 91 (93)
T ss_dssp SEEEEEECCCCS
T ss_pred CcEEEEEEeCCC
Confidence 689999988764
No 45
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.44 E-value=4.5e-13 Score=119.11 Aligned_cols=90 Identities=24% Similarity=0.277 Sum_probs=76.9
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc--
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-- 653 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-- 653 (671)
.+.|.|.+.. .+|||+|.++.+.. ..+++|..|.+++||+++|+|++||+|++|||+++.+++|++++++|+.+
T Consensus 7 ~~~v~l~k~~--~glG~~i~gg~~~~--~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 7 GTLVRVKKSA--ATLGIAIEGGANTR--QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK 82 (103)
T ss_dssp SEEEEEECCS--SSCCEEEECBTTSS--CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHH
T ss_pred eEEEEEEcCC--CcCCeEEECCCCCC--CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcc
Confidence 4578887765 89999999987653 12459999999999999999999999999999999999999999999985
Q ss_pred --CCCcEEEEEEeCCCCC
Q psy1156 654 --KNGSISLHICRRLKSK 669 (671)
Q Consensus 654 --g~~~VtL~V~Rr~~~~ 669 (671)
....+.|+|.|..+..
T Consensus 83 ~~~~~~i~l~v~r~~~~~ 100 (103)
T 1ufx_A 83 TKDRDYIDFLVTEFNSGP 100 (103)
T ss_dssp CSSCSEEEEEECCCCCCT
T ss_pred cCCCCeEEEEEEEcccCC
Confidence 4578999999877543
No 46
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.44 E-value=8.4e-13 Score=114.29 Aligned_cols=87 Identities=26% Similarity=0.384 Sum_probs=74.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.. .+|||.+.++.. ..|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..+
T Consensus 4 ~~r~v~l~k~~--~~lG~~i~~~~~----~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 4 SVKIIRLVKNR--EPLGATIKKDEQ----TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp CCEEEEEEESS--SCCCEEEEECTT----TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred cEEEEEEEeCC--CCccEEEEecCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45688999975 699999987622 248999999999999999999999999999999999999999999999986
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
+.|.|+|.|....
T Consensus 78 -~~v~l~v~~~~~~ 90 (93)
T 3o46_A 78 -GAITFKIIPGSKE 90 (93)
T ss_dssp -EEEEEEEECC---
T ss_pred -CeEEEEEEeCCCC
Confidence 6899999886643
No 47
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.43 E-value=5.1e-13 Score=117.89 Aligned_cols=87 Identities=18% Similarity=0.278 Sum_probs=75.3
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
.+..+.|.|.|.. ++|||+|.++.. ..+||++|.+||+|++.|.|++||+|++|||++|.+++|.+++.+|+
T Consensus 3 ~g~~k~V~l~K~~--~~LG~tI~~~g~------g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk 74 (95)
T 3gge_A 3 KGIEKEVNVYKSE--DSLGLTITDNGV------GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLK 74 (95)
T ss_dssp CEEEEEEEEECCS--SCCCEEEECSSS------SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCeEEEEEEEECC--CCceEEEEcCCC------CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHH
Confidence 3466899999954 899999996421 56899999999999999999999999999999999999999999999
Q ss_pred c--CCCeEEEEEEeCCc
Q psy1156 465 S--GPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~--~g~~V~L~V~R~~~ 479 (671)
. .+..++|++.++.+
T Consensus 75 ~~~~g~~~~L~lv~p~~ 91 (95)
T 3gge_A 75 ELKKEELFTMKLIEPKK 91 (95)
T ss_dssp HSCTTCEEEEEEEEECS
T ss_pred hCCCCCEEEEEEECccc
Confidence 6 45688888887644
No 48
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.43 E-value=8.8e-13 Score=113.31 Aligned_cols=85 Identities=27% Similarity=0.454 Sum_probs=75.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.++. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||++|.+++|.+++.+|+..
T Consensus 4 ~~r~v~l~k~~--~g~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 75 (90)
T 2he4_A 4 RPRLCHLRKGP--QGYGFNLHSDKSR----PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR- 75 (90)
T ss_dssp CCEEEEEECBT--TBCCEEEEECSSS----SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-
T ss_pred CcEEEEEEECC--CCccEEEEccCCC----CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34689999987 7999999987653 489999999999999999 999999999999999999999999999987
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
...|.|+|.|...
T Consensus 76 ~~~v~l~v~r~~~ 88 (90)
T 2he4_A 76 EDEARLLVVGPST 88 (90)
T ss_dssp SSEEEEEEECCCC
T ss_pred CCcEEEEEEccCC
Confidence 4789999988753
No 49
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.43 E-value=3.8e-13 Score=121.27 Aligned_cols=91 Identities=42% Similarity=0.677 Sum_probs=79.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecC-CCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCH-DLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~-~lSheEAV~lLK~s 653 (671)
..+.|.|.+.. ..+|||++.++.+...+..|++|..|.++|||+++|+|++||+|++|||++|. ++++.+++.+|+..
T Consensus 20 ~~~~v~l~k~~-~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 20 HVEVFELLKPP-SGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp CEEEEEEECCS-SSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred eEEEEEEEECC-CCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 45689998875 37899999988765545579999999999999999999999999999999998 99999999999986
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
+ ..|.|+|.|+..
T Consensus 99 ~-~~v~l~v~R~~~ 111 (117)
T 2o2t_A 99 K-DTVQLVIARGSL 111 (117)
T ss_dssp C-SEEEEEEESSCC
T ss_pred C-CEEEEEEEeCCc
Confidence 4 789999998764
No 50
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=7.6e-13 Score=119.79 Aligned_cols=93 Identities=32% Similarity=0.501 Sum_probs=79.1
Q ss_pred ceeeEEEeeCCC-----CCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHH
Q psy1156 575 TFHTIVFEKGPG-----KKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAI 647 (671)
Q Consensus 575 ~~~~V~L~K~~g-----~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV 647 (671)
....|.|.+... ..+|||+|.++.+.+. +..|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 456788888752 2689999998876431 345899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEEEeCCCC
Q psy1156 648 SLFKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 648 ~lLK~sg~~~VtL~V~Rr~~~ 668 (671)
.+|+..+ ..|.|+|.|+...
T Consensus 92 ~~l~~~~-~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 92 SIISQQS-GEAEICVRLDLNM 111 (117)
T ss_dssp HHHSCCS-SCEEEEEESSCCC
T ss_pred HHHhcCC-CEEEEEEEECCcc
Confidence 9999864 7899999988653
No 51
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.43 E-value=1.2e-12 Score=111.21 Aligned_cols=83 Identities=34% Similarity=0.647 Sum_probs=72.4
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC-C
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK-N 655 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg-~ 655 (671)
.+|+|.|.. .+|||.+.++.+. ..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..+ .
T Consensus 2 ~~v~l~k~~--~g~G~~i~~~~~~---~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 76 (85)
T 2i04_A 2 IHTKLRKSS--RGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 76 (85)
T ss_dssp EEEEEECBT--TBSSEEEEECCST---TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTT
T ss_pred EEEEEEECC--CCCCEEEEcccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 367888876 7899999987553 257999999999999999999999999999999999999999999999874 3
Q ss_pred CcEEEEEEe
Q psy1156 656 GSISLHICR 664 (671)
Q Consensus 656 ~~VtL~V~R 664 (671)
..|.|+|.|
T Consensus 77 ~~v~l~v~R 85 (85)
T 2i04_A 77 ASVDLELCR 85 (85)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 679999876
No 52
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=9e-13 Score=113.59 Aligned_cols=85 Identities=24% Similarity=0.386 Sum_probs=73.5
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.|.++ .+|||++.+... .+++|..|.++|||+++|.|++||+|++|||+++.+++|++++.+|+..+
T Consensus 2 ~r~V~l~K~~~-~~lG~~i~~~~~-----~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~- 74 (88)
T 1kwa_A 2 SRLVQFQKNTD-EPMGITLKMNEL-----NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMR- 74 (88)
T ss_dssp CEEEEEEECSS-SCCCEEEECSCG-----GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCC-
T ss_pred eEEEEEEeCCC-CceeEEEEeCCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC-
Confidence 35789999863 789999987422 47999999999999994449999999999999999999999999999986
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
+.|+|+|.|...
T Consensus 75 ~~v~l~v~r~~~ 86 (88)
T 1kwa_A 75 GSITFKIVPSYR 86 (88)
T ss_dssp EEEEEEEECCCC
T ss_pred CcEEEEEECCcC
Confidence 599999988654
No 53
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.42 E-value=1.4e-12 Score=118.06 Aligned_cols=91 Identities=27% Similarity=0.580 Sum_probs=77.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||.|.++.+.. ..|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..+
T Consensus 15 ~~~~v~l~~~~-~~~lG~~i~g~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 91 (119)
T 1x6d_A 15 GIHVTILHKEE-GAGLGFSLAGGADLE--NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAR 91 (119)
T ss_dssp TEEEEEEECCT-TSCCSEEEECCSSSS--CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTT
T ss_pred CeEEEEEEeCC-CCccCEEEeCCCCCC--CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45677777764 489999999887642 358999999999999999999999999999999999999999999999887
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
...+.|+|.|+.+.
T Consensus 92 ~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 92 EPRQAVIVTRKLTP 105 (119)
T ss_dssp SSSEEEEEEECCCS
T ss_pred CCeEEEEEEcCCCc
Confidence 55677888887653
No 54
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.42 E-value=8.8e-13 Score=117.48 Aligned_cols=80 Identities=34% Similarity=0.641 Sum_probs=72.5
Q ss_pred CCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEe
Q psy1156 587 KKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICR 664 (671)
Q Consensus 587 ~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~R 664 (671)
..+|||+|.||.+... +..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+ +.|.|+|.|
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R 90 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTS-DFVYLKVAK 90 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCC-SEEEEEEEC
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC-CeEEEEEEe
Confidence 3899999999987653 4558999999999999999999999999999999999999999999999875 699999999
Q ss_pred CCC
Q psy1156 665 RLK 667 (671)
Q Consensus 665 r~~ 667 (671)
+..
T Consensus 91 ~~~ 93 (106)
T 4amh_A 91 PGS 93 (106)
T ss_dssp CSS
T ss_pred CCC
Confidence 764
No 55
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=113.93 Aligned_cols=88 Identities=28% Similarity=0.466 Sum_probs=79.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
+++.|.|.|..++.+|||++.++... .|++|..|.++|||+++|.|++||+|++|||+++.++++.++...++..
T Consensus 3 ~~~~v~l~k~~~~~~lG~~~~~~~~~-----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 3 EILQVALHKRDSGEQLGIKLVRRTDE-----PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS 77 (95)
T ss_dssp EEEEEEEECSSTTCCCCEEEEECSSS-----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred EEEEEEEEECCCCCcccEEEEeccCC-----CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46789999866678999999986543 6899999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 78 g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 78 GERVNLTIARPGK 90 (95)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCEEEEEEEcCCc
Confidence 8999999999765
No 56
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1e-12 Score=119.21 Aligned_cols=92 Identities=45% Similarity=0.756 Sum_probs=80.1
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
...+.|.|.+.. .+|||+|.++.+.+. ...|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+++
T Consensus 16 ~~~~~v~l~r~~--~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 16 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEEECCS--SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred CceEEEEEEECC--CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356789999886 899999999876432 2458999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCCC
Q psy1156 652 TIKNGSISLHICRRLKS 668 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~~ 668 (671)
..+ ..|.|+|.|+...
T Consensus 94 ~~g-~~v~l~v~R~~~~ 109 (120)
T 2eno_A 94 NAG-YAVSLRVQHRLQV 109 (120)
T ss_dssp HHC-SEEEEEEEEEEEC
T ss_pred cCC-CeEEEEEEeCCcC
Confidence 874 7899999997653
No 57
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.42 E-value=1.8e-12 Score=115.08 Aligned_cols=93 Identities=24% Similarity=0.474 Sum_probs=78.0
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
..+.|.|.+..+..+|||.+.++.+... ...|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+.
T Consensus 12 ~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2jre_A 12 SLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN 91 (108)
T ss_dssp EEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4567788543345899999998765432 34589999999999999999999999999999999999999999999988
Q ss_pred cCCCcEEEEEEeCCCC
Q psy1156 653 IKNGSISLHICRRLKS 668 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~~ 668 (671)
.+ ..|.|+|.|+...
T Consensus 92 ~g-~~v~l~v~R~~~~ 106 (108)
T 2jre_A 92 AG-NPVRLLLIRRLPL 106 (108)
T ss_dssp HC-SEEEEEEEECCCC
T ss_pred CC-CeEEEEEEeCCcC
Confidence 54 7899999998754
No 58
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=113.43 Aligned_cols=90 Identities=27% Similarity=0.420 Sum_probs=76.9
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCC-CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSP-RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~-~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
...|.|.+.. .+|||++.++.+.. ....|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..
T Consensus 4 ~~~v~l~k~~--~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 80 (97)
T 2jil_A 4 TVEVTLHKEG--NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC- 80 (97)
T ss_dssp EEEEEEECBT--TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHS-
T ss_pred EEEEEEEeCC--CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4578888764 79999999886532 1245899999999999999999999999999999999999999999999984
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
...|.|+|.|+...
T Consensus 81 g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 81 GQEAALLIEYDVSE 94 (97)
T ss_dssp CSEEEEEEEEECCC
T ss_pred CCeEEEEEEeCCCc
Confidence 47899999997654
No 59
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.41 E-value=2.2e-12 Score=112.44 Aligned_cols=90 Identities=37% Similarity=0.555 Sum_probs=78.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||++.++.+.. ..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 4 ~~~~v~l~~~~--~~lG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 4 CETTIEISKGR--TGLGLSIVGGSDTL--LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP 79 (98)
T ss_dssp EEEEEEEECBT--TBTCEEEEECTTST--TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CEEEEEEEECC--CcccEEEecCCCCC--CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34678888875 78999999876543 248999999999999999999999999999999999999999999999875
Q ss_pred CCcEEEEEEeCCCCC
Q psy1156 655 NGSISLHICRRLKSK 669 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~ 669 (671)
..|.|+|.|+....
T Consensus 80 -~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 80 -QRVRLTLYRDEAPY 93 (98)
T ss_dssp -SEEEEEEEECSSCC
T ss_pred -CeEEEEEEcCCCCC
Confidence 78999999977543
No 60
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.41 E-value=2.6e-12 Score=112.05 Aligned_cols=88 Identities=28% Similarity=0.380 Sum_probs=75.4
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.+.++.+.. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..
T Consensus 5 ~~~~v~l~~~~--~~lG~~i~~~~~~~---~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~- 78 (97)
T 1n7e_A 5 IIYTVELKRYG--GPLGITISGTEEPF---DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMA- 78 (97)
T ss_dssp CEEEEEEECTT--SCCCEEEECCSSTT---SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-
T ss_pred eEEEEEEEeCC--CCcCEEEEcccCCC---CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45678887664 77999999875432 4899999999999999999999999999999999999999999999865
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
...|.|+|.|+...
T Consensus 79 g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 79 GETVTLKIKKQTDA 92 (97)
T ss_dssp CSEEEEEEECCCCC
T ss_pred CCeEEEEEEeCCCC
Confidence 47899999987654
No 61
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.41 E-value=1.7e-12 Score=114.18 Aligned_cols=85 Identities=35% Similarity=0.585 Sum_probs=75.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.+.. .+|||.+.++.+. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 11 ~~~~v~l~k~~--~glG~~~~~~~~~----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 84 (104)
T 3i4w_A 11 EPRRIVIHRGS--TGLGFNIVGGEXG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 84 (104)
T ss_dssp SCEEEEEECBT--TBTSEEEEECC-C----CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred ccEEEEEEeCC--CccCEEEECCCCC----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45689999885 7899999988653 38999999999999999999999999999999999999999999999874
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 85 -~~v~l~v~r~~ 95 (104)
T 3i4w_A 85 -QTVTIIAQYKP 95 (104)
T ss_dssp -SEEEEEEEECH
T ss_pred -CeEEEEEEECc
Confidence 78999999874
No 62
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.41 E-value=1.6e-12 Score=118.56 Aligned_cols=90 Identities=19% Similarity=0.330 Sum_probs=79.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.+. +.++|||+|.++.....+. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..
T Consensus 24 ~~~~v~l~k~-~~~~lGf~i~gg~~~~~~~-~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 24 HEKVVNIQKD-PGESLGMTVAGGASHREWD-LPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEECC-TTCCCCEEEEECSCSTTCC-CCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CcEEEEEEeC-CCCccCEEEecCCCCCCCC-CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4578888864 4689999999987543333 7899999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEeCC
Q psy1156 467 PLNMDLLISRTS 478 (671)
Q Consensus 467 g~~V~L~V~R~~ 478 (671)
+..|.|+|.|..
T Consensus 102 ~~~v~L~v~R~~ 113 (118)
T 3b76_A 102 SSSIVLKALEVK 113 (118)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEECC
Confidence 999999998853
No 63
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.40 E-value=2e-12 Score=119.15 Aligned_cols=89 Identities=33% Similarity=0.617 Sum_probs=77.6
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
.....|.|.++. .+|||.+.++.+. ..|++|..|.++|+|+++|+|++||+|++|||++|.+++|.+++.+|+..
T Consensus 17 g~~~~v~l~~~~--~g~G~~i~g~~~~---~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~ 91 (129)
T 2kpk_A 17 GKFIHTKLRKSS--RGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSI 91 (129)
T ss_dssp SEEEEEEEEECS--SCCSEEEEEEEET---TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CcEEEEEEEECC--CcccEEEeCccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 355678898875 7999999986542 25799999999999999999999999999999999999999999999987
Q ss_pred C-CCcEEEEEEeCCC
Q psy1156 654 K-NGSISLHICRRLK 667 (671)
Q Consensus 654 g-~~~VtL~V~Rr~~ 667 (671)
+ ...|.|+|.|+..
T Consensus 92 ~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 92 PIGASVDLELCRGYP 106 (129)
T ss_dssp CTTEEEEEEEEECSC
T ss_pred CCCCeEEEEEEeCCC
Confidence 4 3679999999864
No 64
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.40 E-value=1.2e-12 Score=112.56 Aligned_cols=86 Identities=28% Similarity=0.415 Sum_probs=74.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..++|.|.+.. ..+|||.+.++.+.. .|++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+++..+
T Consensus 4 ~~~~v~l~k~~-~~~lG~~i~~~~~~~---~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 4 QRRRVTVRKAD-AGGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 79 (90)
T ss_dssp SCEEEEEECCT-TTCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ccEEEEEEeCC-CCCcCEEEEcccCCC---CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35689998865 479999999876532 58999999999999999449999999999999999999999999999875
Q ss_pred CCcEEEEEEeC
Q psy1156 655 NGSISLHICRR 665 (671)
Q Consensus 655 ~~~VtL~V~Rr 665 (671)
..|.|+|.|.
T Consensus 80 -~~v~l~v~r~ 89 (90)
T 1qav_A 80 -KEVVLEVKYM 89 (90)
T ss_dssp -SEEEEEEEEC
T ss_pred -CeEEEEEEEe
Confidence 7899999874
No 65
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=117.86 Aligned_cols=92 Identities=27% Similarity=0.450 Sum_probs=79.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC------CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP------RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAIS 648 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~------~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~ 648 (671)
..+.|.|.+.. ..+|||+|.++.+.. ....|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.
T Consensus 15 ~~~~v~l~k~~-~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 93 (117)
T 2ehr_A 15 PPRIVEIFREP-NVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVE 93 (117)
T ss_dssp CCEEEEECCCS-SSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCEEEEEEeCC-CCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45688998875 479999999987642 12358999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEEEeCCCC
Q psy1156 649 LFKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 649 lLK~sg~~~VtL~V~Rr~~~ 668 (671)
+|+..+ ..|.|+|.|....
T Consensus 94 ~~~~~g-~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 94 AIKNAG-NPVVFIVQSLSST 112 (117)
T ss_dssp HHHTSC-SSEEEEECCBSCC
T ss_pred HHHcCC-CeEEEEEEECCCC
Confidence 999864 7899999887754
No 66
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=116.04 Aligned_cols=89 Identities=30% Similarity=0.504 Sum_probs=75.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||+|.++.+.. .|++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+|+..+
T Consensus 9 ~~~~v~l~~~~-~~~lG~~l~~g~~~~---~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 84 (103)
T 2dc2_A 9 PIRKVLLLKED-HEGLGISITGGKEHG---VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR 84 (103)
T ss_dssp CEEEEEEECCS-SSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred CcEEEEEEeCC-CCccCEEEEeccCCC---CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34678888765 479999999886542 48999999999999997339999999999999999999999999999985
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
+.|.|+|.|....
T Consensus 85 -~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 85 -GEIEFEVVYVALE 97 (103)
T ss_dssp -SEEEEEEEECC--
T ss_pred -CcEEEEEEecCCc
Confidence 7999999987653
No 67
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.40 E-value=1.6e-12 Score=118.74 Aligned_cols=88 Identities=36% Similarity=0.600 Sum_probs=78.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||+|.++.+.. ..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 25 ~~~~v~l~k~~--~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 25 ELHIIELEKDK--NGLGLSLAGNKDRS--RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp EEEEEEEECCS--SCCCEEEECBSSTT--SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred ceEEEEEEeCC--CccCEEEeccCCCC--cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 55688998885 79999999886542 358999999999999999999999999999999999999999999999885
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+..
T Consensus 101 -~~v~l~v~R~~~ 112 (124)
T 2daz_A 101 -SKVKLVFIRNED 112 (124)
T ss_dssp -SEEEEEEEECTT
T ss_pred -CeEEEEEEeCCC
Confidence 689999999764
No 68
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.40 E-value=2.1e-12 Score=111.43 Aligned_cols=84 Identities=21% Similarity=0.382 Sum_probs=72.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.++. .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 3 ~~r~v~l~~~~--~g~G~~l~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 72 (91)
T 2f5y_A 3 RYRQITIPRGK--DGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCP 72 (91)
T ss_dssp EEEEEEEECBT--TBTSEEEECS-------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred ceEEEEEEeCC--CCccEEEecC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45688999886 7899999764 368999999999999999 9999999999999999999999999999864
Q ss_pred CCcEEEEEEeCCCCC
Q psy1156 655 NGSISLHICRRLKSK 669 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~ 669 (671)
+.|.|+|.|+.+..
T Consensus 73 -~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 73 -SEIILLVWRMVPQV 86 (91)
T ss_dssp -SEEEEEEEECC---
T ss_pred -CeEEEEEEeCCCCC
Confidence 68999999987643
No 69
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.40 E-value=1.4e-12 Score=113.74 Aligned_cols=89 Identities=36% Similarity=0.493 Sum_probs=76.4
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCC---CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPR---GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~---g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
.+.|+|.|.. ..+|||+|.++.+... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 6 ~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 6 IHMVTLDKTG-KKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEECTT-SSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEEEeCC-CCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 4678998854 4799999998865432 23589999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCC
Q psy1156 653 IKNGSISLHICRRL 666 (671)
Q Consensus 653 sg~~~VtL~V~Rr~ 666 (671)
. ...|.|+|.|+.
T Consensus 85 ~-g~~v~l~v~R~g 97 (98)
T 1ihj_A 85 A-DFKIELEIQTFD 97 (98)
T ss_dssp S-CSEEEEEEEEC-
T ss_pred C-CCeEEEEEEeCC
Confidence 5 478999999874
No 70
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.40 E-value=1.3e-12 Score=112.30 Aligned_cols=77 Identities=22% Similarity=0.359 Sum_probs=69.3
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
+.++|+|.|. +.++|||++.+ | +|..|.+|+||+++| |++||+|++|||+++.+++|++++.+|+.+
T Consensus 4 ~~r~v~l~k~-~~g~~Gf~i~~----------g-~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~ 70 (82)
T 1r6j_A 4 DPRTITMHKD-STGHVGFIFKN----------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTS 70 (82)
T ss_dssp CCEEEEEECC-TTSCCCEEEET----------T-EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred ceEEEEEEEC-CCCCeEEEEEC----------C-EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 5689999985 46789999983 3 378999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEe
Q psy1156 467 PLNMDLLISR 476 (671)
Q Consensus 467 g~~V~L~V~R 476 (671)
+..|+|+|..
T Consensus 71 g~~V~L~v~p 80 (82)
T 1r6j_A 71 GTVVTITIMP 80 (82)
T ss_dssp CSEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999999864
No 71
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.40 E-value=1.6e-12 Score=120.54 Aligned_cols=91 Identities=20% Similarity=0.379 Sum_probs=77.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC---------CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP---------RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLE 645 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~---------~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheE 645 (671)
..+.|+|.|.. ..+|||+|.++.+.. ....|++|..|.++|+|+++| |++||+|++|||++|.++++.+
T Consensus 27 ~~r~v~l~r~~-~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 27 KEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCEEEEECCT-TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHH
T ss_pred CCEEEEEEECC-CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 44689998864 479999999987632 123489999999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEEeCCCC
Q psy1156 646 AISLFKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 646 AV~lLK~sg~~~VtL~V~Rr~~~ 668 (671)
++.+|+..+ ..|.|+|.|....
T Consensus 105 ~~~~l~~~g-~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 105 VVNMIRQGG-NTLMVKVVMVTRH 126 (132)
T ss_dssp HHHHHHHTT-TEEEEEEECCCC-
T ss_pred HHHHHHcCC-CEEEEEEEECCCC
Confidence 999999875 7899999887643
No 72
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.40 E-value=1.6e-12 Score=111.06 Aligned_cols=83 Identities=34% Similarity=0.561 Sum_probs=72.2
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
...|++ ++. .+|||++.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++.. .
T Consensus 4 ~~~v~l-~~~--~~~G~~l~~g~~~~---~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g 75 (88)
T 2uzc_A 4 NYSVSL-VGP--APWGFRLQGGKDFN---MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC-T 75 (88)
T ss_dssp EEEEEE-ESS--SCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-C
T ss_pred EEEEEE-cCC--CcccEEEECcCCCC---CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-C
Confidence 456777 443 78999999876643 589999999999999999 999999999999999999999999999877 4
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 76 ~~v~l~v~R~g 86 (88)
T 2uzc_A 76 GSLNMTLQRES 86 (88)
T ss_dssp SEEEEEEECCC
T ss_pred CeEEEEEEeCC
Confidence 78999998864
No 73
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.39 E-value=5.2e-13 Score=119.42 Aligned_cols=93 Identities=31% Similarity=0.572 Sum_probs=79.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC------CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP------RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAIS 648 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~------~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~ 648 (671)
..+.|.|.+.. ..+|||.|.++.+.. ....|++|..|.++|+|+++|+|++||+|++|||++|.++++.+++.
T Consensus 9 ~~~~v~l~k~~-~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 9 GLRELCIQKAP-GERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp SSSCEEEECCT-TCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred ccEEEEEEECC-CCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35678998876 479999999987532 12458999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEEEeCCCCC
Q psy1156 649 LFKTIKNGSISLHICRRLKSK 669 (671)
Q Consensus 649 lLK~sg~~~VtL~V~Rr~~~~ 669 (671)
+|+..+ ..|.|+|.|+....
T Consensus 88 ~l~~~g-~~v~l~v~r~~~~~ 107 (111)
T 1uju_A 88 LLRSVG-DTLTVLVCDGFESG 107 (111)
T ss_dssp HHSSCS-SEEEECCCCCCCCS
T ss_pred HHHcCC-CeEEEEEEECCCCC
Confidence 998864 78999999887543
No 74
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.39 E-value=1.8e-12 Score=116.39 Aligned_cols=86 Identities=33% Similarity=0.665 Sum_probs=75.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||+|.++.+.. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 24 ~~~~v~l~~~~--~glG~~l~~~~~~~---~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g 98 (112)
T 2r4h_A 24 DFYTVELERGA--KGFGFSLRGGREYN---MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGG 98 (112)
T ss_dssp CEEEEEEECBT--TBTSEEEEECGGGT---CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred ceEEEEEEcCC--CccCEEEeccccCC---CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 56788998876 78999999876432 58999999999999999999999999999999999999999999998864
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 99 -~~v~l~v~R~~ 109 (112)
T 2r4h_A 99 -RRVRLFLKRGE 109 (112)
T ss_dssp -TEEEEEEECCE
T ss_pred -CeEEEEEEeCC
Confidence 78999998864
No 75
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.39 E-value=1e-12 Score=119.95 Aligned_cols=94 Identities=23% Similarity=0.340 Sum_probs=76.8
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+++.|+|.|. +.++|||+|.++.+...+. .|++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+++
T Consensus 22 ~~~~~~v~l~k~-~~~~lGf~i~gg~~~~~~~-~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~ 99 (120)
T 2iwo_A 22 SMGLRTVEMKKG-PTDSLGISIAGGVGSPLGD-VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLK 99 (120)
T ss_dssp ---CEEEEEEC-----CCCEEEEEEEEETTEE-EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred CCCcEEEEEEcC-CCCCCCEEEecccCCCCCC-CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 446789999885 3579999999976533222 58999999999999999449999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
..+..|.|+|.|.+..
T Consensus 100 ~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 100 NASGSIEMQVVAGGDV 115 (120)
T ss_dssp HCCSEEEEEEECCTTS
T ss_pred cCCCeEEEEEEECCcc
Confidence 8888999999997653
No 76
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.39 E-value=4.2e-12 Score=113.22 Aligned_cols=92 Identities=35% Similarity=0.606 Sum_probs=78.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.+.+.+.. .+|||.|.++.+...+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 11 ~~~~~~l~~~~--~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 88 (111)
T 2koj_A 11 KRLNIQLKKGT--EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTK 88 (111)
T ss_dssp EEEEEEEECBT--TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred cEEEEEEEECC--CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34567777765 7999999987655444568999999999999999999999999999999999999999999999862
Q ss_pred -CCcEEEEEEeCCCC
Q psy1156 655 -NGSISLHICRRLKS 668 (671)
Q Consensus 655 -~~~VtL~V~Rr~~~ 668 (671)
...|.|+|.|+...
T Consensus 89 ~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 89 MEGTVSLLVFRQEEA 103 (111)
T ss_dssp CSSEEEEEEEECCCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 46899999987653
No 77
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.39 E-value=1.6e-12 Score=110.24 Aligned_cols=82 Identities=30% Similarity=0.468 Sum_probs=70.6
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
..|+|. + ..+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+ +
T Consensus 3 ~~v~l~-~--~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~ 74 (85)
T 1rgw_A 3 YSVTLT-G--PGPWGFRLQGGKDFN---MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-Y 74 (85)
T ss_dssp EEEEEC-C--SSCCCEEECCCGGGT---SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCS-S
T ss_pred EEEEEe-C--CCccCEEEEeccCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCC-C
Confidence 456773 3 278999999876543 479999999999999999 9999999999999999999999999998775 6
Q ss_pred cEEEEEEeCC
Q psy1156 657 SISLHICRRL 666 (671)
Q Consensus 657 ~VtL~V~Rr~ 666 (671)
.|.|+|.|+.
T Consensus 75 ~v~l~v~R~~ 84 (85)
T 1rgw_A 75 NLSLTLQKSK 84 (85)
T ss_dssp CEEEEEESCC
T ss_pred eEEEEEEeCC
Confidence 7999998864
No 78
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.39 E-value=2.1e-12 Score=110.20 Aligned_cols=83 Identities=28% Similarity=0.477 Sum_probs=71.9
Q ss_pred eEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCc
Q psy1156 578 TIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGS 657 (671)
Q Consensus 578 ~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~ 657 (671)
.+++.+.. ..+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..+ ..
T Consensus 3 ~~~v~~~~-~~~lG~~l~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~ 76 (87)
T 2pa1_A 3 ALTVDVAG-PAPWGFRITGGRDFH---TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SP 76 (87)
T ss_dssp EEEEEECS-SSCCSEEEEEEGGGT---EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SS
T ss_pred EEEEEECC-CCccCEEEecccCCC---CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-Ce
Confidence 34444443 479999999876542 589999999999999999 9999999999999999999999999999986 89
Q ss_pred EEEEEEeCC
Q psy1156 658 ISLHICRRL 666 (671)
Q Consensus 658 VtL~V~Rr~ 666 (671)
|.|+|.|+.
T Consensus 77 v~l~v~R~~ 85 (87)
T 2pa1_A 77 LRLQLDRIT 85 (87)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 999999975
No 79
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.38 E-value=3.8e-12 Score=110.44 Aligned_cols=91 Identities=29% Similarity=0.431 Sum_probs=79.7
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.|.|.+.. .+|||++.++.+..... .|++|..|.++|||+++|+|++||+|++|||+.+.++++.++..+++.
T Consensus 4 g~~~~v~l~k~~--~~lG~~i~~g~~~~~~~-~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 4 GDIFEVELAKND--NSLGISVTGGVNTSVRH-GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN 80 (96)
T ss_dssp TCEEEEEEECSS--SSCCEEEECCSSSCSSS-SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS
T ss_pred CCEEEEEEEeCC--CCCCEEEECCCCCCCCc-CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 467889998854 89999999876543333 689999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|...
T Consensus 81 ~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 81 TGQVVHLLLEKGQS 94 (96)
T ss_dssp CCSEEEEEEECCSC
T ss_pred CCCeEEEEEEcCCC
Confidence 88899999988653
No 80
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.38 E-value=1.7e-12 Score=110.69 Aligned_cols=83 Identities=33% Similarity=0.564 Sum_probs=72.1
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHh-CCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAED-GRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAara-GrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
.+.|.|.+.. ..+|||.+.++.+.. .|++|..|.++|||+++ | |++||+|++|||+++.++++.+++.+++..+
T Consensus 3 ~~~v~l~~~~-~~~lG~~i~~~~~~~---~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 77 (87)
T 4e34_A 3 IRKVLLLKED-HEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQR 77 (87)
T ss_dssp CEEEEEECCT-TBCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred EEEEEEEECC-CCcccEEEEccCCCC---CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4678998876 479999999876542 57999999999999994 7 9999999999999999999999999999875
Q ss_pred CCcEEEEEEe
Q psy1156 655 NGSISLHICR 664 (671)
Q Consensus 655 ~~~VtL~V~R 664 (671)
+.+.|+|.+
T Consensus 78 -~~v~l~v~~ 86 (87)
T 4e34_A 78 -GEIEFEVVY 86 (87)
T ss_dssp -SEEEEEEEE
T ss_pred -CeEEEEEEE
Confidence 689998864
No 81
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.38 E-value=5.9e-12 Score=111.38 Aligned_cols=87 Identities=34% Similarity=0.580 Sum_probs=76.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+. +
T Consensus 15 ~~~~v~l~k~~-~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~ 88 (104)
T 1wi2_A 15 LPRIVTLKKPP-GAQLGFNIRGGKASQ---LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-A 88 (104)
T ss_dssp CCEEEEECCCT-TCCCSEEEECCSSSC---CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-S
T ss_pred CCEEEEEEeCC-CCCccEEEEcccCCC---CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-C
Confidence 34689999886 379999999876543 589999999999999999 99999999999999999999999999998 3
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|....
T Consensus 89 -~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 89 -REISMRVRFFSGP 101 (104)
T ss_dssp -SSEEEEEECCCCS
T ss_pred -CEEEEEEEECCCC
Confidence 7899999887654
No 82
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.38 E-value=9.9e-13 Score=113.38 Aligned_cols=85 Identities=24% Similarity=0.393 Sum_probs=72.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.|.. .+|||.+.+..+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 3 ~pr~v~l~k~~--~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 74 (91)
T 2vsp_A 3 KPKLCRLAKGE--NGYGFHLNAIRGL----PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS- 74 (91)
T ss_dssp CEEEEEEECBT--TBTSCCCBCCTTC----SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-
T ss_pred CcEEEEEEeCC--CcccEEEEeccCC----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34689999987 6899999876543 489999999999999999 999999999999999999999999999987
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
...|.|+|.|+..
T Consensus 75 g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 75 GKNVTLLVCGKKA 87 (91)
T ss_dssp CSEEEEEEEC---
T ss_pred CCEEEEEEEeCCc
Confidence 4789999998764
No 83
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.38 E-value=2.2e-12 Score=113.80 Aligned_cols=92 Identities=30% Similarity=0.534 Sum_probs=78.4
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.|.++.+.. +..|++|..|.+++||+++|+|++||+|++|||++|.++++.+++.+++..
T Consensus 11 ~~~~v~l~~~~--~g~G~~l~~~~~~~-~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 86 (104)
T 2djt_A 11 GHFSVELVRGY--AGFGLTLGGGRDVA-GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAG- 86 (104)
T ss_dssp CCEEEEEECCS--SSCCEEEECCEETT-EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHT-
T ss_pred ceEEEEEEeCC--CCccEEEEeccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45688888876 79999999875431 124899999999999999999999999999999999999999999999885
Q ss_pred CCcEEEEEEeCCCCCC
Q psy1156 655 NGSISLHICRRLKSKK 670 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~~ 670 (671)
...|.|+|.|+....+
T Consensus 87 g~~v~l~v~R~g~~~~ 102 (104)
T 2djt_A 87 GPQLHLVIRRPLSGPS 102 (104)
T ss_dssp CSEEEEEECCCCCCCC
T ss_pred CCeEEEEEEECCCCCC
Confidence 4789999998876543
No 84
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.38 E-value=3.3e-12 Score=116.61 Aligned_cols=87 Identities=26% Similarity=0.471 Sum_probs=76.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||++.++.+.. .|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..+
T Consensus 19 ~~~~v~l~k~~-~~~lG~~i~gg~~~~---~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 94 (125)
T 3hpk_A 19 VPGKVTLQKDA-QNLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 94 (125)
T ss_dssp EEEEEEEECCT-TSCCCEEEEECSSCC---SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CCeEEEEEeCC-CCCcCEEEeccCCCC---CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678888876 478999999987643 58999999999999999999999999999999999999999999999975
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
+.|.|+|.|..
T Consensus 95 -~~v~l~v~r~~ 105 (125)
T 3hpk_A 95 -GEVTIHYNKLQ 105 (125)
T ss_dssp -SEEEEEEEEEC
T ss_pred -CeEEEEEEECC
Confidence 67999998843
No 85
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.38 E-value=3.1e-12 Score=118.42 Aligned_cols=82 Identities=28% Similarity=0.430 Sum_probs=72.2
Q ss_pred CCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC--CCeEEEEE
Q psy1156 397 DFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG--PLNMDLLI 474 (671)
Q Consensus 397 ~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~--g~~V~L~V 474 (671)
...++|||+|.++.....+. .|+||..|.++|||+++|+|++||+|++|||+.|.++++.+++.+|+.. +..|.|+|
T Consensus 45 ~~~~~lG~~i~gg~~~~~~~-~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v 123 (131)
T 1wfg_A 45 DSGAMLGLKVVGGKMTESGR-LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVV 123 (131)
T ss_dssp CSCTTTTEEEEEEEECSSSC-EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEE
T ss_pred CCCCCCCEEEecCccCCCCC-CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEE
Confidence 35789999999887654334 6899999999999999999999999999999999999999999999865 48899999
Q ss_pred EeCCc
Q psy1156 475 SRTSL 479 (671)
Q Consensus 475 ~R~~~ 479 (671)
.|.+.
T Consensus 124 ~R~g~ 128 (131)
T 1wfg_A 124 SRSGP 128 (131)
T ss_dssp EEECS
T ss_pred EcCCC
Confidence 98654
No 86
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.38 E-value=4.9e-12 Score=112.90 Aligned_cols=86 Identities=30% Similarity=0.568 Sum_probs=76.0
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.|.++.+ .|++|..|.++|+|+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 15 ~~~~v~l~~~~--~~lG~~l~~~~~-----~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 87 (111)
T 2dlu_A 15 HVEEVELINDG--SGLGFGIVGGKT-----SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCG 87 (111)
T ss_dssp EEEEEEEECCS--SCCCEEEECCSS-----SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHC
T ss_pred ceEEEEEEeCC--CccCEEEeccCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45678888865 789999997754 38999999999999999999999999999999999999999999999874
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|+...
T Consensus 88 -~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 88 -NSVRMLVARDPAG 100 (111)
T ss_dssp -SEEEEEEEESCTT
T ss_pred -CeEEEEEEeCCCC
Confidence 7899999987654
No 87
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.38 E-value=4.6e-12 Score=109.38 Aligned_cols=90 Identities=21% Similarity=0.323 Sum_probs=77.4
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCC-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEG-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
.++.|+|.+.. .+|||+|.++.+.... ...|++|..|.++|||+++|.|++||+|++|||+.+.++++.++..+++.
T Consensus 3 ~~~~v~l~k~~--~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 3 TIMEVNLLKGP--KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp CEEEEEEECCT--TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 56889998864 7899999987654311 12689999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEEEEeCC
Q psy1156 466 GPLNMDLLISRTS 478 (671)
Q Consensus 466 ~g~~V~L~V~R~~ 478 (671)
.+..+.|+|.|.+
T Consensus 81 ~~~~v~l~v~R~g 93 (94)
T 2fe5_A 81 TSDMVYLKVAKPG 93 (94)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 7789999998864
No 88
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.38 E-value=9.7e-13 Score=121.10 Aligned_cols=93 Identities=33% Similarity=0.532 Sum_probs=75.9
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCC-CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPR-GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI- 653 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~-g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s- 653 (671)
...|.|.+.. ..+|||+|.++.+... +..|+||..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+.+
T Consensus 26 ~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 104 (127)
T 1wg6_A 26 TLEIPLNDSG-SAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSM 104 (127)
T ss_dssp EEEEECSSST-TTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHH
T ss_pred EEEEEEeeCC-CCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhh
Confidence 3445555333 4899999998765321 235899999999999999999999999999999999999999999999975
Q ss_pred -----CCCcEEEEEEeCCCCC
Q psy1156 654 -----KNGSISLHICRRLKSK 669 (671)
Q Consensus 654 -----g~~~VtL~V~Rr~~~~ 669 (671)
....|.|+|.|+....
T Consensus 105 ~~~g~~~~~v~l~v~R~~~~~ 125 (127)
T 1wg6_A 105 SMEGNIRGMIQLVILRRSGPS 125 (127)
T ss_dssp HHHHHHTCEEEEEEEECSCSS
T ss_pred ccccCCCCEEEEEEEeCCCCC
Confidence 1378999999987543
No 89
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.38 E-value=3.4e-12 Score=110.94 Aligned_cols=89 Identities=26% Similarity=0.438 Sum_probs=76.4
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.++. .+|||.+.+..+. .+..|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 3 ~~r~v~l~k~~--~~~G~~l~~~~~~-~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 77 (96)
T 2v90_A 3 KPRCLHLEKGP--QGFGFLLREEKGL-DGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ- 77 (96)
T ss_dssp CCEEEEEECBT--TBSCEEEEEEECT-TSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred CCEEEEEEeCC--CcccEEEEeccCC-CCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 34689999986 6999999874332 223589999999999999999 999999999999999999999999999986
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
...|.|+|.|+...
T Consensus 78 g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 78 GSCVSLTVVDPEAD 91 (96)
T ss_dssp TTEEEEEEECCCTT
T ss_pred CCEEEEEEECCCCc
Confidence 47899999997653
No 90
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.37 E-value=2.3e-12 Score=110.48 Aligned_cols=84 Identities=31% Similarity=0.508 Sum_probs=71.8
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
...|++.. ..+|||.|.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+
T Consensus 4 ~~~v~~~~---~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g- 75 (89)
T 2q3g_A 4 SFKVVLEG---PAPWGFRLQGGKDFN---VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACG- 75 (89)
T ss_dssp EEEEEEES---SSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCT-
T ss_pred EEEEEEcC---CCcccEEEECcCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 34566642 378999999876542 589999999999999999 9999999999999999999999999998874
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+..
T Consensus 76 ~~v~l~v~R~~~ 87 (89)
T 2q3g_A 76 ERLSLGLSRAIT 87 (89)
T ss_dssp TEEEEEEEEECC
T ss_pred CEEEEEEEeCCC
Confidence 789999988764
No 91
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=9.4e-12 Score=110.91 Aligned_cols=91 Identities=29% Similarity=0.514 Sum_probs=77.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC---CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR---GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~---g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
..+.+.+.+.. .+|||.|.++.+... ...|++|..|.++|||+++| |++||+|++|||++|.++++.+++..++
T Consensus 15 ~~~~~~l~~~~--~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 91 (110)
T 1x5q_A 15 EELTLTILRQT--GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 91 (110)
T ss_dssp EEEEEEEECSS--SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEecCC--CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHhh
Confidence 45677887774 899999998876432 34689999999999999999 9999999999999999999999999988
Q ss_pred hcCCCcEEEEEEeCCCCC
Q psy1156 652 TIKNGSISLHICRRLKSK 669 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~~~ 669 (671)
.. ...|.|+|.|+.+..
T Consensus 92 ~~-g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 92 GA-GTAVQMRVWRESGPS 108 (110)
T ss_dssp SC-CSEEEEEEEECSSCC
T ss_pred CC-CCeEEEEEEECCccC
Confidence 75 478999999987643
No 92
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.37 E-value=3.6e-12 Score=111.04 Aligned_cols=88 Identities=24% Similarity=0.403 Sum_probs=73.2
Q ss_pred ceeeEEEeeCCCCCcccEEEec-CCC---CCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVG-GKD---SPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLF 650 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~G-g~d---s~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lL 650 (671)
..+.|.|.|.+ ..+|||+|.+ +.. ......|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|
T Consensus 4 ~~r~v~l~k~~-~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 4 QRKVLTLEKGD-NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CEEEEEEECCT-TCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEeCC-CCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34689999986 4699999997 111 01113589999999999999999 999999999999999999999999999
Q ss_pred HhcCCCcEEEEEEeC
Q psy1156 651 KTIKNGSISLHICRR 665 (671)
Q Consensus 651 K~sg~~~VtL~V~Rr 665 (671)
+..+ +.|.|+|.+.
T Consensus 82 ~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASG-NVLRLETLYG 95 (96)
T ss_dssp HHTT-TEEEEEEECC
T ss_pred HhCC-CeEEEEEEEC
Confidence 9985 6999999764
No 93
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=110.64 Aligned_cols=80 Identities=31% Similarity=0.557 Sum_probs=69.7
Q ss_pred eEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCc
Q psy1156 578 TIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGS 657 (671)
Q Consensus 578 ~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~ 657 (671)
.|+|.+......|||.+.+ |+||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|+..+ +.
T Consensus 3 ~v~l~~~~~~~~~G~~~~~---------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~ 72 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS---------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GK 72 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE---------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TE
T ss_pred EEEEEeCCCCCCCCEEEeC---------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-Ce
Confidence 4667665556789999864 6999999999999999999999999999999999999999999999985 79
Q ss_pred EEEEEEeCCC
Q psy1156 658 ISLHICRRLK 667 (671)
Q Consensus 658 VtL~V~Rr~~ 667 (671)
|.|+|.+...
T Consensus 73 v~L~v~~~~~ 82 (88)
T 3e17_A 73 LQLVVLRDLE 82 (88)
T ss_dssp EEEEECCC--
T ss_pred EEEEEeCCCc
Confidence 9999977654
No 94
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.37 E-value=4.4e-12 Score=112.28 Aligned_cols=93 Identities=24% Similarity=0.373 Sum_probs=79.5
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCC--CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSE--GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~--g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
..++.|+|.|.. .+|||+|.++.+... +. .|++|..|.++|||+++|+|++||+|++|||+.+.++++.+++..+
T Consensus 2 e~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (105)
T 2awx_A 2 EKIMEIKLIKGP--KGLGFSIAGGVGNQHIPGD-NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTAL 78 (105)
T ss_dssp -CEEEEEEECBT--TBSSEEEEECBTSCSBTTB-CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred CeEEEEEEEECC--CCCCEEEeCccCCCCCCCC-CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 357889998865 799999999875431 12 5899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCccc
Q psy1156 464 SSGPLNMDLLISRTSLKK 481 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~~ 481 (671)
+..+..+.|+|.|.+...
T Consensus 79 ~~~~~~v~l~v~R~~~~~ 96 (105)
T 2awx_A 79 KNTSDFVYLKVAKPTSMY 96 (105)
T ss_dssp HSCCSEEEEEEECCCC--
T ss_pred HcCCCeEEEEEEcCCCCC
Confidence 988889999999977643
No 95
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.37 E-value=2.6e-12 Score=111.15 Aligned_cols=84 Identities=26% Similarity=0.437 Sum_probs=72.0
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.+.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||++|.+++|.+++.+|+..+
T Consensus 6 ~r~v~l~~~~--~~~G~~l~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 77 (95)
T 3r68_A 6 PRVVVIKKGS--NGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG- 77 (95)
T ss_dssp CEEEEEECBT--TBCSCEEEEC--C----CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTT-
T ss_pred cEEEEEecCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 3578898875 7999999877553 389999999999999999 9999999999999999999999999999975
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
+.+.|++.|+..
T Consensus 78 ~~~~~~~~r~~~ 89 (95)
T 3r68_A 78 DQTTLLVLDKEL 89 (95)
T ss_dssp TEEEEEEEECC-
T ss_pred CeEEEEEECCcc
Confidence 778888877653
No 96
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.37 E-value=6.2e-12 Score=111.40 Aligned_cols=91 Identities=22% Similarity=0.354 Sum_probs=76.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCC---------CcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRG---------AIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLE 645 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g---------~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheE 645 (671)
..+.|.|.|.. .+|||+|.++.+.... ..++||..|.++|||+++| |++||+|++|||++|.++++.+
T Consensus 6 ~~r~v~l~k~~--~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 6 SPRVVRIVKSE--SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp CCEEEEEECBT--TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CcEEEEEEECC--CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 34688999986 5899999987543210 2356799999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEEeCCCCC
Q psy1156 646 AISLFKTIKNGSISLHICRRLKSK 669 (671)
Q Consensus 646 AV~lLK~sg~~~VtL~V~Rr~~~~ 669 (671)
++.+|+..+ ..|.|+|.|.....
T Consensus 83 ~~~~l~~~g-~~v~l~v~r~~~~~ 105 (107)
T 3qe1_A 83 VVDLIRAGE-KELILTVLSVESES 105 (107)
T ss_dssp HHHHHHHCS-SEEEEEEECSSCCC
T ss_pred HHHHHHcCC-CEEEEEEEcCCCCC
Confidence 999999864 78999999877543
No 97
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.37 E-value=1.5e-12 Score=118.29 Aligned_cols=90 Identities=28% Similarity=0.403 Sum_probs=78.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|+|.|.. .+|||+|.++.+...+. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..
T Consensus 25 ~~~~v~L~k~~--~glGf~l~~g~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 101 (117)
T 2fne_A 25 QCKSITLERGP--DGLGFSIVGGYGSPHGD-LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT 101 (117)
T ss_dssp EEEEEEECCBT--TBTSEEEEEEEEETTEE-EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred ccEEEEEEeCC--CcccEEEecccCCCCCC-CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56789998864 79999999876543223 6899999999999999999999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
++.|.|+|.|.+.
T Consensus 102 ~~~v~l~v~R~g~ 114 (117)
T 2fne_A 102 KGTVTLMVLSSDE 114 (117)
T ss_dssp CSSEEEEEEECSC
T ss_pred CCeEEEEEEeCCc
Confidence 7889999999765
No 98
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.37 E-value=3.6e-12 Score=110.28 Aligned_cols=88 Identities=26% Similarity=0.434 Sum_probs=75.7
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
+..++.|+|.|.. ++|||++.++... .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 2 ~~~~r~v~l~k~~--~~lG~~i~~~~~~-----~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 74 (93)
T 3o46_A 2 SDSVKIIRLVKNR--EPLGATIKKDEQT-----GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILA 74 (93)
T ss_dssp --CCEEEEEEESS--SCCCEEEEECTTT-----CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHH
T ss_pred CccEEEEEEEeCC--CCccEEEEecCCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3467899999964 7999999976221 68999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..++.+.|+|.+...
T Consensus 75 ~~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 75 QSQGAITFKIIPGSK 89 (93)
T ss_dssp HCCEEEEEEEECC--
T ss_pred hCCCeEEEEEEeCCC
Confidence 888899999987543
No 99
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.36 E-value=6.2e-12 Score=108.09 Aligned_cols=87 Identities=24% Similarity=0.292 Sum_probs=76.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+++.|+|.+.....+|||.+.++... .|++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+++
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~-----~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 77 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLE-----KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIA 77 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTS-----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3467889998864346899999986543 689999999999999999 9999999999999999999999998888
Q ss_pred cCCCeEEEEEEeC
Q psy1156 465 SGPLNMDLLISRT 477 (671)
Q Consensus 465 ~~g~~V~L~V~R~ 477 (671)
..+..+.|+|.|+
T Consensus 78 ~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 78 ESGNKLDLVISRN 90 (91)
T ss_dssp TSTTEEEEEEEEC
T ss_pred cCCCEEEEEEEeC
Confidence 7788999999885
No 100
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.36 E-value=4.7e-12 Score=109.06 Aligned_cols=86 Identities=28% Similarity=0.485 Sum_probs=76.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
+.+.|+|.+. +..+|||++.++.+. .|++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..
T Consensus 4 ~~~~v~l~k~-~~~~lG~~~~~~~~~-----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (92)
T 2qg1_A 4 DTLTIGLQKK-PGKGLGLSIVGKRND-----TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS 77 (92)
T ss_dssp CEEEEEEECC-TTSCCSEEEECCSSS-----CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred eEEEEEEEeC-CCCcccEEEEeccCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5678999884 468999999976542 6899999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEeCC
Q psy1156 467 PLNMDLLISRTS 478 (671)
Q Consensus 467 g~~V~L~V~R~~ 478 (671)
+..+.|+|.|..
T Consensus 78 ~~~v~l~v~R~~ 89 (92)
T 2qg1_A 78 LGTVTLEVGRIS 89 (92)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEccc
Confidence 889999999865
No 101
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.36 E-value=2.9e-12 Score=116.03 Aligned_cols=90 Identities=26% Similarity=0.304 Sum_probs=77.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||.+.++.+.. ..|+||..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..
T Consensus 15 ~~~~v~l~k~~-~~~lG~~i~~~~~~~--~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~- 90 (117)
T 1v62_A 15 GPLMVEIVKTP-GSALGISLTTTSLRN--KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASI- 90 (117)
T ss_dssp SSEEEEEECCT-TCCCCCEEEEECCSS--SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSC-
T ss_pred CcEEEEEEcCC-CCcccEEEEccCCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 45688998876 378999999875432 23599999999999999999999999999999999999999999999975
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
...|.|+|.|....
T Consensus 91 g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 91 SEKVRLEILPVPQS 104 (117)
T ss_dssp SSEEEEEECCBTTB
T ss_pred CCeEEEEEEECCCC
Confidence 47899999987653
No 102
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.36 E-value=3.6e-12 Score=113.61 Aligned_cols=92 Identities=24% Similarity=0.330 Sum_probs=78.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|.|.|.. .+|||+|.++.+.......|++|..|.++|||+++|+|++||+|++|||+.|.++++.+++.+|+
T Consensus 13 ~~~~~~v~l~k~~--~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (108)
T 2d92_A 13 SPEVKIVELVKDC--KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILK 90 (108)
T ss_dssp CSSCEEEEEEECS--SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred CCceEEEEEEECC--CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567899999964 79999999876522111278999999999999999999999999999999999999999999999
Q ss_pred cC-CCeEEEEEEeCC
Q psy1156 465 SG-PLNMDLLISRTS 478 (671)
Q Consensus 465 ~~-g~~V~L~V~R~~ 478 (671)
.. +..|.|+|.|..
T Consensus 91 ~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 91 AVPPGLVHLGICSGP 105 (108)
T ss_dssp HSCSEEEEEEEECCC
T ss_pred hCCCCeEEEEEEcCC
Confidence 74 578999998854
No 103
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.36 E-value=5.6e-12 Score=108.30 Aligned_cols=86 Identities=22% Similarity=0.329 Sum_probs=76.5
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...++|+|.+.. .+|||.+.++... .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|+.
T Consensus 3 ~~~r~v~l~k~~--~g~G~~~~~~~~~-----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 74 (90)
T 2he4_A 3 LRPRLCHLRKGP--QGYGFNLHSDKSR-----PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKA 74 (90)
T ss_dssp TCCEEEEEECBT--TBCCEEEEECSSS-----SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTT
T ss_pred CCcEEEEEEECC--CCccEEEEccCCC-----CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 356889998864 7999999987642 689999999999999999 99999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|...
T Consensus 75 ~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 75 REDEARLLVVGPST 88 (90)
T ss_dssp SSSEEEEEEECCCC
T ss_pred CCCcEEEEEEccCC
Confidence 78899999998653
No 104
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.36 E-value=2.3e-12 Score=114.18 Aligned_cols=87 Identities=23% Similarity=0.378 Sum_probs=75.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhC-CCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDG-RLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraG-rLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.+.. ..+|||.+.++.+.. .|++|..|.++|||+++| +|++||+|++|||++|.+++|.+++.+|+..
T Consensus 17 ~~~~v~l~~~~-~~~~G~~~~gg~~~~---~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~ 92 (107)
T 3nfk_A 17 NLVLIRMKPDE-NGRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 92 (107)
T ss_dssp CCEEEEECCCT-TSCCCEEEEEEGGGT---EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCG
T ss_pred CEEEEEEEcCC-CCCCCEEEEccCCCC---CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 45678888875 379999999876542 489999999999999999 6999999999999999999999999999987
Q ss_pred CC---CcEEEEEEeC
Q psy1156 654 KN---GSISLHICRR 665 (671)
Q Consensus 654 g~---~~VtL~V~Rr 665 (671)
+. ..|.|+|.|+
T Consensus 93 ~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 93 CERHSGELMLLVRPN 107 (107)
T ss_dssp GGSBTTBEEEEEECC
T ss_pred cccCCcEEEEEEEcC
Confidence 52 3899999874
No 105
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.36 E-value=2.4e-12 Score=116.23 Aligned_cols=89 Identities=28% Similarity=0.500 Sum_probs=76.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC---CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR---GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~---g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
..+.|.|.+.. ..+|||.|.++.+.+. +..|++|..|.++|||+ +| |++||+|++|||++|.+++|.+++.+|+
T Consensus 14 ~~~~v~l~k~~-~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~ 90 (117)
T 2csj_A 14 EQYTVTLQKDS-KRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLR 90 (117)
T ss_dssp EEEEEEEECCS-SSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHH
T ss_pred eEEEEEEEECC-CCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 45678888875 4799999999876543 35689999999999997 77 9999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCC
Q psy1156 652 TIKNGSISLHICRRLK 667 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~ 667 (671)
..+ ..|.|+|.|+.+
T Consensus 91 ~~~-~~v~l~v~R~~~ 105 (117)
T 2csj_A 91 KSG-KIAAIVVKRPRK 105 (117)
T ss_dssp HSC-SEEEEEEEEEEE
T ss_pred cCC-CeEEEEEEECCc
Confidence 874 789999998754
No 106
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.36 E-value=2.8e-12 Score=112.03 Aligned_cols=88 Identities=24% Similarity=0.377 Sum_probs=73.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||.+.+. ..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 8 ~~~~v~l~~~~-~~glG~~~~~~------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~ 80 (96)
T 2qkv_A 8 EKFNVDLMKKA-GKELGLSLSPN------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN 80 (96)
T ss_dssp CCEEEEEECBT-TBCCCEEEEEC------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred ceEEEEEEeCC-CCCccEEEEeC------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 34578887654 37899999772 148999999999999999999999999999999999999999999999875
Q ss_pred CCcEEEEEEeCCCCCC
Q psy1156 655 NGSISLHICRRLKSKK 670 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~~ 670 (671)
+.|.|+|.|..+...
T Consensus 81 -~~v~l~v~R~~p~~~ 95 (96)
T 2qkv_A 81 -GKVSMEVTRPKPAAA 95 (96)
T ss_dssp -SEEEEEEECCCC---
T ss_pred -CcEEEEEEeCCcccC
Confidence 789999999876654
No 107
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.36 E-value=7.4e-12 Score=108.68 Aligned_cols=88 Identities=30% Similarity=0.539 Sum_probs=75.3
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCC---CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPR---GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~---g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
.+.+.+.+.. .+|||+|.++.+... ...|++|..|.++|||+++| |++||+|++|||++|.++++.+++..++.
T Consensus 4 ~~~v~~~~~~--~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 4 ELTLTILRQT--GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp EEEEEEECBT--TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEEeCC--CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 4567787774 899999998776432 34689999999999999999 99999999999999999999999988887
Q ss_pred cCCCcEEEEEEeCCC
Q psy1156 653 IKNGSISLHICRRLK 667 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~ 667 (671)
. ...|.|+|.|+.+
T Consensus 81 ~-g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 81 A-GTAVQMRVWRERE 94 (97)
T ss_dssp S-CSEEEEEEECCSS
T ss_pred C-CCeEEEEEEeCCc
Confidence 5 4789999999764
No 108
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=4.2e-12 Score=109.34 Aligned_cols=84 Identities=23% Similarity=0.369 Sum_probs=73.4
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhh-cCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEK-EGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~r-aG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
++.|+|.|. ++++|||+|.++.. .+++|..|.++|||++ +| |++||+|++|||+++.++++++++.+|+..
T Consensus 2 ~r~V~l~K~-~~~~lG~~i~~~~~------~~~~I~~V~~gspA~~~ag-L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 73 (88)
T 1kwa_A 2 SRLVQFQKN-TDEPMGITLKMNEL------NHCIVARIMHGGMIHRQGT-LHVGDEIREINGISVANQTVEQLQKMLREM 73 (88)
T ss_dssp CEEEEEEEC-SSSCCCEEEECSCG------GGEEEEEECTTSHHHHHTC-CCTTCEEEEETTEEGGGSCHHHHHHHHHHC
T ss_pred eEEEEEEeC-CCCceeEEEEeCCC------CCEEEEEECCCCHHHHcCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 578999985 46899999996421 5799999999999999 56 999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
.+.+.|+|.|...
T Consensus 74 ~~~v~l~v~r~~~ 86 (88)
T 1kwa_A 74 RGSITFKIVPSYR 86 (88)
T ss_dssp CEEEEEEEECCCC
T ss_pred CCcEEEEEECCcC
Confidence 6699999988653
No 109
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.35 E-value=6.1e-12 Score=110.33 Aligned_cols=92 Identities=26% Similarity=0.345 Sum_probs=79.0
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCC-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEG-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...+.|+|.+.. .+|||++.++.+.... ...|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.+++
T Consensus 6 ~~~~~v~l~~~~--~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 6 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EEEEEEEEECCT--TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CccEEEEEEeCC--CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356889998854 8999999998754310 1168999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..+.|+|.|.+.
T Consensus 84 ~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 84 NAGYAVSLRVQHRLE 98 (101)
T ss_dssp TCCSEEEEEEEEESC
T ss_pred hCCCeEEEEEEeCCC
Confidence 778899999988654
No 110
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.35 E-value=2.7e-12 Score=118.49 Aligned_cols=93 Identities=27% Similarity=0.425 Sum_probs=78.3
Q ss_pred CCCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 384 SQEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 384 ~~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
.+..++.|+|.+. ..+|||+|.++.+...+. .+++|..|.+|+||+++|.|++||+|++|||+.+.+++|.+++.+|
T Consensus 26 ~~~~~~~v~l~k~--~~glG~~i~gg~~~~~~~-~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l 102 (130)
T 1i16_A 26 AEATVCTVTLEKM--SAGLGFSLEGGKGSLHGD-KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNII 102 (130)
T ss_dssp SSEEEEEEEEETT--SSSTTEEEECCCCCSSSC-CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHH
T ss_pred CCCcEEEEEEEcC--CCccCEEEecCcCCCCCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3557788999875 379999999987633223 6899999999999999944999999999999999999999999999
Q ss_pred hcCC-CeEEEEEEeCCc
Q psy1156 464 SSGP-LNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g-~~V~L~V~R~~~ 479 (671)
+..+ ..|.|+|.|...
T Consensus 103 ~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 103 KALPDGPVTIVIRRKSL 119 (130)
T ss_dssp HTSCSSEEEEEEEEESS
T ss_pred HhCCCceEEEEEEeCCC
Confidence 9764 469999988644
No 111
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.35 E-value=5.9e-12 Score=110.60 Aligned_cols=91 Identities=21% Similarity=0.305 Sum_probs=78.8
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCC-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEG-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
+.+.|+|.+. ..+|||+|.++.+.+.. ...|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.+++.
T Consensus 4 ~~~~v~l~k~--~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 81 (102)
T 2i1n_A 4 KYEEIVLERG--NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE 81 (102)
T ss_dssp EEEEEEEECB--TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred eEEEEEEEEC--CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4577888875 48999999998754321 12689999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|.+.
T Consensus 82 ~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 82 AGPVVRLVVRRRQP 95 (102)
T ss_dssp SCSEEEEEEEEECC
T ss_pred CCCeEEEEEEeCCC
Confidence 88999999999765
No 112
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.35 E-value=6.4e-12 Score=115.23 Aligned_cols=92 Identities=21% Similarity=0.418 Sum_probs=78.5
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
...+.|.|.+.. ..+|||.+.++.+... ...|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+
T Consensus 14 ~~~~~v~l~~~~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 92 (129)
T 2dmz_A 14 FETYNVELVRKD-GQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLR 92 (129)
T ss_dssp EEEEEEEECCCT-TCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHH
T ss_pred CcEEEEEEEeCC-CCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356678886644 4899999998765433 3468999999999999999999999999999999999999999999999
Q ss_pred hcCCCcEEEEEEeCCC
Q psy1156 652 TIKNGSISLHICRRLK 667 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~ 667 (671)
.. ...|.|+|.|+..
T Consensus 93 ~~-~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 93 NA-GQVVHLTLVRRKT 107 (129)
T ss_dssp HC-CSSEEEEEEEESS
T ss_pred cC-CCeEEEEEEeCCc
Confidence 84 5789999999764
No 113
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.35 E-value=7.1e-12 Score=110.97 Aligned_cols=92 Identities=24% Similarity=0.456 Sum_probs=78.6
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
+...+.|+| +. ..+|||+|.++....... .|++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 9 ~~~~~~v~l-~~--~~glG~~i~~~~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~ 84 (106)
T 3axa_A 9 EPEIITVTL-KK--QNGMGLSIVAAKGAGQDK-LGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMT 84 (106)
T ss_dssp -CCEEEEEE-EC--SSSCSEEEEEEECSSCSS-EEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CceEEEEEE-CC--CCccCEEEEeecCCCCCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 446677888 54 489999999875433233 68999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
..+..+.|+|.|.+..
T Consensus 85 ~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 85 RTSSVVTLEVAKQGAI 100 (106)
T ss_dssp TCCSEEEEEEECCCSS
T ss_pred cCCCeEEEEEEeCCcc
Confidence 8889999999997653
No 114
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.35 E-value=9.9e-14 Score=153.13 Aligned_cols=154 Identities=19% Similarity=0.271 Sum_probs=52.2
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEeCCccccccccccccccccc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISRTSLKKSNAENEYNESHSRE 495 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~~~~~a~~~~~~~~s~~ 495 (671)
.|++|..|.+++||+++| |++||+|++|||+.|..+ .++..++. ..+..+.|+|.|++........
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~--------- 353 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQVNVNLE--------- 353 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCEEECCCC---------
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEE---------
Confidence 689999999999999999 999999999999999876 45566665 3578899999997653221000
Q ss_pred ccccccccccccCCcccCCcccchhhhhhhccccccccchhhhhhcccccCCCCCchhhhhhccCCccCCCCCCCCcccc
Q psy1156 496 KKSKETRFSLDKQNDFESSNEQDKNNQKRLFQKNCHSINNKLLRKAIISTGSISGDEEETILTSTNFCTLPRRPRSAICT 575 (671)
Q Consensus 496 ~~~~~~~ss~d~e~~~~ssp~~~k~s~~~~~q~~~~s~~~~~~r~~v~s~~s~s~d~~~s~~~s~~~~~lP~~p~s~~~~ 575 (671)
. ... . ... . . +.
T Consensus 354 ----~---------------~~~------~-------------~~~-~-----~----------------~~-------- 365 (448)
T 1ky9_A 354 ----L---------------QQS------S-------------QNQ-V-----D----------------SS-------- 365 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----E---------------ecC------C-------------Ccc-c-----c----------------cc--------
Confidence 0 000 0 000 0 0 00
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
. + . ..-+|+.+..... ..|++|..|.++|+|+++| |++||+|++|||++|. ++.++..+|+..+
T Consensus 366 --~--~--~--~~~~G~~l~~~~~----~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l~~~~- 429 (448)
T 1ky9_A 366 --S--I--F--NGIEGAEMSNKGK----DQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKP- 429 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --c--c--c--ccccceEeeccCC----CCeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHcCC-
Confidence 0 0 0 0123555532211 2489999999999999999 9999999999999998 6788999998765
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
+.|.|+|.|+..
T Consensus 430 ~~v~l~v~R~g~ 441 (448)
T 1ky9_A 430 SVLALNIQRGDS 441 (448)
T ss_dssp ------------
T ss_pred CeEEEEEEECCE
Confidence 589999988764
No 115
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.35 E-value=4e-12 Score=112.27 Aligned_cols=83 Identities=29% Similarity=0.378 Sum_probs=73.4
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.|..+ .+|||++....+ .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++++|+..+
T Consensus 13 ~~~v~l~K~~~-~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~- 85 (97)
T 2ejy_A 13 VRLIQFEKVTE-EPMGICLKLNEK-----QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETK- 85 (97)
T ss_dssp CEEEEEEECSS-SCCSEEEEECTT-----CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCC-
T ss_pred cEEEEEEeCCC-CCeeEEEEeCCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 46889999874 799999986433 38999999999999999999999999999999999999999999999874
Q ss_pred CcEEEEEEeC
Q psy1156 656 GSISLHICRR 665 (671)
Q Consensus 656 ~~VtL~V~Rr 665 (671)
+.|.|+|.+.
T Consensus 86 ~~v~L~V~~~ 95 (97)
T 2ejy_A 86 GMISLKVIPN 95 (97)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 7899999764
No 116
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.35 E-value=8.4e-12 Score=111.17 Aligned_cols=92 Identities=20% Similarity=0.372 Sum_probs=76.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC---------CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR---------GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLE 645 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~---------g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheE 645 (671)
..+.|.|.+.. ..+|||.|.++.+... ...|++|..|.++|||+++| |++||+|++|||++|.+++|.+
T Consensus 7 ~~~~v~l~~~~-~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~ 84 (109)
T 1q3o_A 7 KEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 84 (109)
T ss_dssp EEEEEEEECCT-TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CcEEEEEEECC-CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 45678887654 4799999998876321 12489999999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEEEeCCCCC
Q psy1156 646 AISLFKTIKNGSISLHICRRLKSK 669 (671)
Q Consensus 646 AV~lLK~sg~~~VtL~V~Rr~~~~ 669 (671)
++.+|+..+ ..|.|+|.|..+..
T Consensus 85 ~~~~l~~~~-~~v~l~v~~~~~~p 107 (109)
T 1q3o_A 85 VVNMIRQGG-NTLMVKVVMVTRHP 107 (109)
T ss_dssp HHHHHHHTT-TEEEEEEEEEECC-
T ss_pred HHHHHHhCC-CEEEEEEEECCCCC
Confidence 999999874 78999998876543
No 117
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.35 E-value=5.6e-12 Score=108.27 Aligned_cols=86 Identities=24% Similarity=0.287 Sum_probs=75.8
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..++|+|.+. ..++|||++.++.+.. .|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 4 ~~~~v~l~k~-~~~~lG~~i~~~~~~~----~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 78 (90)
T 1qav_A 4 QRRRVTVRKA-DAGGLGISIKGGRENK----MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 78 (90)
T ss_dssp SCEEEEEECC-TTTCCCEEEEEEGGGT----EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ccEEEEEEeC-CCCCcCEEEEcccCCC----CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 5688999885 3589999999876543 6899999999999999933999999999999999999999999999988
Q ss_pred CCeEEEEEEeC
Q psy1156 467 PLNMDLLISRT 477 (671)
Q Consensus 467 g~~V~L~V~R~ 477 (671)
+..+.|+|.|.
T Consensus 79 ~~~v~l~v~r~ 89 (90)
T 1qav_A 79 GKEVVLEVKYM 89 (90)
T ss_dssp CSEEEEEEEEC
T ss_pred CCeEEEEEEEe
Confidence 88999999873
No 118
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=8.4e-12 Score=111.23 Aligned_cols=93 Identities=27% Similarity=0.446 Sum_probs=81.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....+.|+|.+.. .+|||+|.++.+...+. .|++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 6 ~~~~~~v~l~~~~--~glG~~l~~g~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 82 (110)
T 1um1_A 6 SGYVFTVELERGP--SGLGMGLIDGMHTHLGA-PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIR 82 (110)
T ss_dssp CCCEEEEEEECCT--TCCCEEEEETTTSTTCC-SSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHH
T ss_pred CCcEEEEEEEECC--CccCEEEeCCcCCCCCC-CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567889998854 79999999876544333 78999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
..+..+.|+|.|.+..
T Consensus 83 ~~~~~v~l~v~R~~~~ 98 (110)
T 1um1_A 83 HGGKKMRFLVAKSDVE 98 (110)
T ss_dssp TCCSEEEEEEECCCHH
T ss_pred cCCCeEEEEEEeCCcc
Confidence 8889999999997653
No 119
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.34 E-value=3.5e-12 Score=116.94 Aligned_cols=93 Identities=17% Similarity=0.377 Sum_probs=81.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeecc-CCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLR-GLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~-~~s~~~av~~L 463 (671)
...++.|.|.+.. .++|||+|.++.+...+. .|++|..|.+++||+++|+|++||+|++|||+.|. ++++.+++.+|
T Consensus 23 ~~~~~~v~l~k~~-~~~lG~~i~g~~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 23 GRQIEYIDIERPS-TGGLGFSVVALRSQNLGK-VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALL 100 (128)
T ss_dssp TCEEEEEEEECCS-SSCCCCEEEEEECSSSSC-EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHH
T ss_pred cCceEEEEEEECC-CCccCEEEecccCCCCCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 4567889998853 579999999887654333 58999999999999999999999999999999997 99999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..|.|+|.|...
T Consensus 101 ~~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 101 QQTTGSLRLIVAREPV 116 (128)
T ss_dssp HHCCSEEEEEEEECCC
T ss_pred HcCCCeEEEEEEcCCC
Confidence 9888999999999754
No 120
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.34 E-value=2.8e-12 Score=117.95 Aligned_cols=92 Identities=23% Similarity=0.295 Sum_probs=77.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC------CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR------GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAIS 648 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~------g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~ 648 (671)
..+.|.|.+.....+|||+|.++.+... ...|++|..|.++|||+++|.|++||+|++|||++|.+++|.+++.
T Consensus 29 ~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 108 (128)
T 1nf3_C 29 THRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTD 108 (128)
T ss_dssp TCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHH
T ss_pred ccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4568999988544799999998754210 1248999999999999999989999999999999999999999999
Q ss_pred HHHhcCCCcEEEEEEeCCC
Q psy1156 649 LFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 649 lLK~sg~~~VtL~V~Rr~~ 667 (671)
+|+..+ +.|.|+|.|...
T Consensus 109 ~l~~~~-~~v~l~v~r~~~ 126 (128)
T 1nf3_C 109 MMIANS-RNLIITVRPANQ 126 (128)
T ss_dssp HHHHTT-TSEEEEEECCCC
T ss_pred HHHcCC-CeEEEEEEECCc
Confidence 999875 679999988764
No 121
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.34 E-value=6.6e-12 Score=110.60 Aligned_cols=91 Identities=25% Similarity=0.330 Sum_probs=74.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI- 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s- 653 (671)
.++.|.+.+..+ .+|||.|.+.... ....|++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+|+..
T Consensus 9 ~~~~v~l~k~~g-~~lG~~i~~~~~~-~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 9 NCREVHLEKRRG-EGLGVALVESGWG-SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp CCEEEEEECCTT-CCCCEEEEECCCS-SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred ceEEEEEEeCCC-CccCEEEEeCCCC-CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 567889988764 6899999753221 1223799999999999999666999999999999999989999999999984
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
....|.|+|.|..+
T Consensus 87 ~g~~v~l~v~R~~p 100 (101)
T 2yt7_A 87 SQTSVTLSIVHCPP 100 (101)
T ss_dssp TSSEEEEEECCCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 34789999988764
No 122
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.34 E-value=4.6e-12 Score=113.24 Aligned_cols=85 Identities=25% Similarity=0.388 Sum_probs=73.5
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
..+|.|.+.. ..+|||.+.+. ..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 3 ~~~v~L~k~~-~~glG~~i~~~------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~- 74 (106)
T 2la8_A 3 KFNVDLMKKA-GKELGLSLSPN------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN- 74 (106)
T ss_dssp EEEEEECCBS-SSTTCCEEEEC------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCB-
T ss_pred EEEEEEEeCC-CCccCEEEEeC------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC-
Confidence 4578887654 37899999872 148999999999999999999999999999999999999999999998875
Q ss_pred CcEEEEEEeCCCC
Q psy1156 656 GSISLHICRRLKS 668 (671)
Q Consensus 656 ~~VtL~V~Rr~~~ 668 (671)
+.|.|+|.|..+.
T Consensus 75 ~~v~l~v~R~~~~ 87 (106)
T 2la8_A 75 GKVSMEVTRPKPG 87 (106)
T ss_dssp SCEEEEEEECCSC
T ss_pred CeEEEEEEeCCCC
Confidence 7899999997543
No 123
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.34 E-value=5.1e-12 Score=112.23 Aligned_cols=92 Identities=24% Similarity=0.395 Sum_probs=78.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEee---ecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAK---IKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKS 461 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~g---g~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~ 461 (671)
...++.|.|.+.. .+|||+|.+ +.+..... .|++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.
T Consensus 7 ~~~~~~v~l~k~~--~glG~~i~~~~~g~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 83 (107)
T 1wf8_A 7 GLELFPVELEKDE--DGLGISIIGMGVGADAGLEK-LGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAAT 83 (107)
T ss_dssp CEEEEEEEEECBT--TBSCEEEEEEEESCCTTCCE-EEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHH
T ss_pred CceEEEEEEEECC--CcccEEEEecCCCCCCCCCC-CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3456778887753 799999998 33322223 68999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeCCc
Q psy1156 462 IISSGPLNMDLLISRTSL 479 (671)
Q Consensus 462 ~L~~~g~~V~L~V~R~~~ 479 (671)
+++..+..+.|+|.|...
T Consensus 84 ~~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 84 VLRNTKGNVRFVIGREKP 101 (107)
T ss_dssp HHHHCCSEEEEEEEEECC
T ss_pred HHhcCCCeEEEEEEeCCC
Confidence 999888999999998654
No 124
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.34 E-value=4.8e-12 Score=112.04 Aligned_cols=89 Identities=27% Similarity=0.349 Sum_probs=77.1
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhc-CCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKE-GCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~ra-G~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
...++.|.|.+. .+++|||+|.++.+.. .|++|..|.++|||+++ | |++||+|++|||+++.++++.+++.++
T Consensus 7 ~~~~~~v~l~~~-~~~~lG~~l~~g~~~~----~~~~V~~V~~~s~A~~a~g-L~~GD~Il~Ing~~v~~~~~~~~~~~l 80 (103)
T 2dc2_A 7 VGPIRKVLLLKE-DHEGLGISITGGKEHG----VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTIL 80 (103)
T ss_dssp --CEEEEEEECC-SSSCCCEEEEEEGGGT----EEEEEEEECTTSHHHHHTC-CCSSEEEEEETTEESTTSCHHHHHHHH
T ss_pred CCCcEEEEEEeC-CCCccCEEEEeccCCC----CCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345678998874 4689999999887543 58999999999999996 7 999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..++.+.|+|.+...
T Consensus 81 ~~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 81 SQQRGEIEFEVVYVAL 96 (103)
T ss_dssp HHCCSEEEEEEEECC-
T ss_pred HhCCCcEEEEEEecCC
Confidence 9888899999998655
No 125
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.34 E-value=5e-12 Score=107.80 Aligned_cols=84 Identities=27% Similarity=0.367 Sum_probs=74.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhh-cCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEK-EGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~r-aG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
+++.|+|.+. +.++|||++.++.+.. .+++|..|.++|||++ +| |++||+|++|||+++.++++.+++.+++.
T Consensus 2 ~~~~v~l~~~-~~~~lG~~i~~~~~~~----~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 75 (87)
T 4e34_A 2 PIRKVLLLKE-DHEGLGISITGGKEHG----VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQ 75 (87)
T ss_dssp CCEEEEEECC-TTBCCCEEEEEEGGGT----EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CEEEEEEEEC-CCCcccEEEEccCCCC----CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 4678999885 4689999999886543 6799999999999999 57 99999999999999999999999999998
Q ss_pred CCCeEEEEEEe
Q psy1156 466 GPLNMDLLISR 476 (671)
Q Consensus 466 ~g~~V~L~V~R 476 (671)
.+..+.|+|.+
T Consensus 76 ~~~~v~l~v~~ 86 (87)
T 4e34_A 76 QRGEIEFEVVY 86 (87)
T ss_dssp CCSEEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 88889998864
No 126
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.34 E-value=7.2e-12 Score=109.13 Aligned_cols=91 Identities=24% Similarity=0.354 Sum_probs=77.8
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCC--CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEG--NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g--~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
.++.|+|.|. ...+|||+|.++.+...+ ...|++|..|.++|||+++|.|++||+|++|||+.+.++++.++..+++
T Consensus 5 ~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 5 LIHMVTLDKT-GKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp EEEEEEEECT-TSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeC-CCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 3578999884 358999999988754321 1258999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCC
Q psy1156 465 SGPLNMDLLISRTS 478 (671)
Q Consensus 465 ~~g~~V~L~V~R~~ 478 (671)
..+..+.|+|.|.+
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 88899999999865
No 127
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.34 E-value=1.1e-11 Score=113.03 Aligned_cols=90 Identities=36% Similarity=0.607 Sum_probs=76.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
....|.+.+.. .+|||.|.++.+...+..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 30 ~~~~v~l~~~~--~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~ 107 (121)
T 2kom_A 30 KRLNIQLKKGT--EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTK 107 (121)
T ss_dssp EEEEEEEECCT--TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred eEEEEEEEcCC--CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 34566776664 7899999987654444568999999999999999999999999999999999999999999999863
Q ss_pred -CCcEEEEEEeCC
Q psy1156 655 -NGSISLHICRRL 666 (671)
Q Consensus 655 -~~~VtL~V~Rr~ 666 (671)
...|.|+|.|+.
T Consensus 108 ~g~~v~l~v~R~g 120 (121)
T 2kom_A 108 MEGTVSLLVFRQE 120 (121)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCEEEEEEEeCC
Confidence 468999998864
No 128
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.33 E-value=8.9e-12 Score=109.52 Aligned_cols=89 Identities=25% Similarity=0.377 Sum_probs=78.6
Q ss_pred CCCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 384 SQEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 384 ~~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
.....+.|+|.+.. .+|||.+.++.+. .|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.++
T Consensus 8 ~~~~~~~v~l~k~~--~glG~~~~~~~~~-----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (104)
T 3i4w_A 8 IPREPRRIVIHRGS--TGLGFNIVGGEXG-----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 80 (104)
T ss_dssp CCSSCEEEEEECBT--TBTSEEEEECC-C-----CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCccEEEEEEeCC--CccCEEEECCCCC-----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34577899998864 7899999987643 5899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..+.|+|.|.+.
T Consensus 81 ~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 81 KNAGQTVTIIAQYKPE 96 (104)
T ss_dssp HTSCSEEEEEEEECHH
T ss_pred HcCCCeEEEEEEECcc
Confidence 9888999999998654
No 129
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=6.8e-12 Score=113.84 Aligned_cols=91 Identities=24% Similarity=0.391 Sum_probs=79.1
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCC--CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSE--GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~--g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
.+++.|+|.+.. .+|||+|.++.+... ++ .|++|..|.++|||+++|+|++||+|++|||+.|.++++.+++.++
T Consensus 23 ~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~-~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 99 (117)
T 2byg_A 23 MTVVEIKLFKGP--KGLGFSIAGGVGNQHIPGD-NSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAIL 99 (117)
T ss_dssp EEEEEEEEECBT--TBSSEEEEECTTSCSBTTB-CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CceEEEEEEeCC--CCcCEEEEcccCCCCccCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356788988754 899999998765321 22 6899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..|.|+|.|.+.
T Consensus 100 ~~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 100 KNTSEVVYLKVGKPTT 115 (117)
T ss_dssp HTCCSEEEEEEEEEEE
T ss_pred HcCCCeEEEEEEeCCc
Confidence 9888999999998653
No 130
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.33 E-value=9.4e-12 Score=108.18 Aligned_cols=90 Identities=27% Similarity=0.408 Sum_probs=76.7
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|+|.+. ..+|||++.++.+.......|++|..|.++|||+++|+|++||+|++|||+.+.++++.++..+|+..+
T Consensus 4 ~~~v~l~k~--~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 4 TVEVTLHKE--GNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEECB--TTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred EEEEEEEeC--CCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 466777764 489999999886532111268999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeCCc
Q psy1156 468 LNMDLLISRTSL 479 (671)
Q Consensus 468 ~~V~L~V~R~~~ 479 (671)
..+.|+|.|.+.
T Consensus 82 ~~v~l~v~R~~~ 93 (97)
T 2jil_A 82 QEAALLIEYDVS 93 (97)
T ss_dssp SEEEEEEEEECC
T ss_pred CeEEEEEEeCCC
Confidence 999999999764
No 131
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.33 E-value=8.3e-12 Score=108.25 Aligned_cols=85 Identities=34% Similarity=0.574 Sum_probs=71.7
Q ss_pred eeEEEeeCCCCCcccEEEecCCCC---C--CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDS---P--RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds---~--~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
.+|.+.+. .+|||.|.++.+. + ....|++|..|.++|||++ | |++||+|++|||++|.++++.+++.+++
T Consensus 5 ~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 5 IRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEECS---SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEECCC---CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 45677665 4799999997642 1 1345899999999999999 8 9999999999999999999999999998
Q ss_pred hcCCCcEEEEEEeCCC
Q psy1156 652 TIKNGSISLHICRRLK 667 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~ 667 (671)
..+ ..|.|+|.|+..
T Consensus 80 ~~~-~~v~l~v~R~~~ 94 (95)
T 1mfg_A 80 TFQ-NTVELIIVREVS 94 (95)
T ss_dssp HCC-SEEEEEEEEECC
T ss_pred cCC-CeEEEEEEeCCC
Confidence 764 789999998754
No 132
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=1.1e-11 Score=108.92 Aligned_cols=91 Identities=27% Similarity=0.509 Sum_probs=74.0
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCC------CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPR------GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISL 649 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~------g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~l 649 (671)
.++|.|.+.. ...|||.+.++.+... ...|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+
T Consensus 5 p~~v~l~~~~-~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 83 (103)
T 2fcf_A 5 PRRVELWREP-SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 83 (103)
T ss_dssp CEEEEECCCC--CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CEEEEEEeCC-CCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3578888765 4689999988654321 12589999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEEeCCCC
Q psy1156 650 FKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 650 LK~sg~~~VtL~V~Rr~~~ 668 (671)
|+..+ +.|.|+|.|..+.
T Consensus 84 l~~~~-~~v~l~v~r~~~~ 101 (103)
T 2fcf_A 84 IRKAG-NPVVFMVQSIIST 101 (103)
T ss_dssp HHTCC-SSEEEEEECCCCC
T ss_pred HHhCC-CcEEEEEEECCCC
Confidence 99885 6999999987654
No 133
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.33 E-value=4.8e-12 Score=111.32 Aligned_cols=85 Identities=26% Similarity=0.439 Sum_probs=74.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.+.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 6 ~~r~v~l~k~~--~g~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 78 (102)
T 2d90_A 6 SGRVVVIKKGS--NGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG 78 (102)
T ss_dssp SSEEEEEECCS--SSSSCEEEECSSS----SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHST
T ss_pred CCEEEEEeeCC--CCccEEEEeecCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34689999876 7999999975442 489999999999999999 9999999999999999999999999998864
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+..
T Consensus 79 -~~v~l~v~r~~~ 90 (102)
T 2d90_A 79 -DQTTLLVLDKEA 90 (102)
T ss_dssp -TEEEEEECSTTC
T ss_pred -CEEEEEEEECCC
Confidence 789999988754
No 134
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=1e-11 Score=112.44 Aligned_cols=92 Identities=20% Similarity=0.344 Sum_probs=80.3
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+.+.|.|.+. .+.+|||.+.++.+.. . .+++|..|.+++||+++|+|++||+|++|||+.|.++++.+++.+|+
T Consensus 13 ~~~~~~v~l~k~-~~~~lG~~i~~~~~~~--~-~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~ 88 (117)
T 1v62_A 13 ASGPLMVEIVKT-PGSALGISLTTTSLRN--K-SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLA 88 (117)
T ss_dssp SSSSEEEEEECC-TTCCCCCEEEEECCSS--S-CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHH
T ss_pred CCCcEEEEEEcC-CCCcccEEEEccCCCC--C-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456789999885 4689999999875432 1 35999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
..+..|.|+|.|....
T Consensus 89 ~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 89 SISEKVRLEILPVPQS 104 (117)
T ss_dssp SCSSEEEEEECCBTTB
T ss_pred hCCCeEEEEEEECCCC
Confidence 8889999999987653
No 135
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.33 E-value=6.1e-12 Score=113.02 Aligned_cols=88 Identities=39% Similarity=0.608 Sum_probs=76.6
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.+.. .+|||.|.++.+.. ..|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 18 ~~~v~l~~~~--~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~- 92 (116)
T 2dm8_A 18 EMIIEISKGR--SGLGLSIVGGKDTP--LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP- 92 (116)
T ss_dssp CEEEEEECCS--SCCCCCCBCCTTSS--CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-
T ss_pred EEEEEEEECC--CcccEEEeCCCCCC--cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 4678887775 89999999876542 148999999999999999999999999999999999999999999999875
Q ss_pred CcEEEEEEeCCCC
Q psy1156 656 GSISLHICRRLKS 668 (671)
Q Consensus 656 ~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|+...
T Consensus 93 ~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 93 QKVRLVVYRDEAH 105 (116)
T ss_dssp SEEEEEEECCSSC
T ss_pred CeEEEEEEeCCcc
Confidence 7899999987653
No 136
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=3e-12 Score=115.82 Aligned_cols=89 Identities=22% Similarity=0.365 Sum_probs=76.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHh-CCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAED-GRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAara-GrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.|.. .++|||.|.++.+.. .|++|..|.++|||+++ |.|++||+|++|||++|.+++|.+++.+++..
T Consensus 15 ~~~~v~l~k~~-~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 15 NLVLIRMKPDE-NGRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp CCEEEEECCCS-SSCCSEEEEEEGGGT---EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred CeEEEEEEeCC-CCCcCEEEecccCCC---CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 45689998876 367999999886542 47999999999999999 33999999999999999999999999999987
Q ss_pred CC---CcEEEEEEeCCC
Q psy1156 654 KN---GSISLHICRRLK 667 (671)
Q Consensus 654 g~---~~VtL~V~Rr~~ 667 (671)
+. ..|.|+|.|+..
T Consensus 91 ~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 91 CERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHCCSSCEEEEEECCCC
T ss_pred cccCCCEEEEEEEcccc
Confidence 42 479999998764
No 137
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=9.8e-12 Score=110.39 Aligned_cols=93 Identities=28% Similarity=0.347 Sum_probs=78.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCC----CCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSS----EGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAK 460 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~----~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av 460 (671)
+...+.|.|.|. ..+|||+|.++.+.. .....|++|..|.++|||+++|.|++||+|++|||+.|.++++.+++
T Consensus 6 ~~~~~~v~l~k~--~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 6 SGKSLTLVLHRD--SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp SSEEEEEEECCS--SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEEEeC--CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 456788888875 589999999876421 01126899999999999999933999999999999999999999999
Q ss_pred HHHhcCCCeEEEEEEeCCc
Q psy1156 461 SIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 461 ~~L~~~g~~V~L~V~R~~~ 479 (671)
.+++..+..+.|+|.|...
T Consensus 84 ~~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 84 EAFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHHCCSSEEEEEEECCS
T ss_pred HHHHcCCCcEEEEEEeCCC
Confidence 9999888999999998654
No 138
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.32 E-value=7.6e-12 Score=121.24 Aligned_cols=90 Identities=24% Similarity=0.385 Sum_probs=77.6
Q ss_pred CCCeEEEEEEeCCCCCcccEEEee---ecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAK---IKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKS 461 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~g---g~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~ 461 (671)
...++.|.|.+.. .+|||+|.+ +.....+. .|++|..|.+||||+++|+|++||+|++|||+.|.++++.+++.
T Consensus 78 ~~~~~~v~l~k~~--~glG~~i~g~~~g~~~~~~~-~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~ 154 (170)
T 3egg_C 78 RLELFPVELEKDS--EGLGISIIGMGAGADMGLEK-LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAAS 154 (170)
T ss_dssp TSEEEEEEEECBT--TBSSEEEEEECSSSSCCSSS-BEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHH
T ss_pred CceEEEEEEEeCC--CeEeEEEEecccCCccccCC-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3456788888754 789999998 33322233 78999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeC
Q psy1156 462 IISSGPLNMDLLISRT 477 (671)
Q Consensus 462 ~L~~~g~~V~L~V~R~ 477 (671)
+|+.++..|.|+|.|.
T Consensus 155 ~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 155 VLRNTKGRVRFMIGRE 170 (170)
T ss_dssp HHHHCCSEEEEEEEEC
T ss_pred HHHcCCCEEEEEEEeC
Confidence 9999899999999884
No 139
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.32 E-value=1.4e-11 Score=107.30 Aligned_cols=88 Identities=24% Similarity=0.443 Sum_probs=76.8
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.|.|.+. .++|||++.++.+.. .+++|..|.+++||+++|.|++||+|++|||+.+.++++.++..+++.
T Consensus 4 ~~~~~v~l~~~--~~~lG~~i~~~~~~~----~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 77 (97)
T 1n7e_A 4 AIIYTVELKRY--GGPLGITISGTEEPF----DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM 77 (97)
T ss_dssp CCEEEEEEECT--TSCCCEEEECCSSTT----SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred ceEEEEEEEeC--CCCcCEEEEcccCCC----CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 35678888654 478999999765432 689999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|.+.
T Consensus 78 ~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 78 AGETVTLKIKKQTD 91 (97)
T ss_dssp CCSEEEEEEECCCC
T ss_pred CCCeEEEEEEeCCC
Confidence 78899999998765
No 140
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.32 E-value=1.1e-11 Score=105.86 Aligned_cols=84 Identities=19% Similarity=0.318 Sum_probs=73.5
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|+| +. ..+|||++.++.+.. .+++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++..+
T Consensus 4 ~~~v~l-~~--~~~~G~~l~~g~~~~----~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 75 (88)
T 2uzc_A 4 NYSVSL-VG--PAPWGFRLQGGKDFN----MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCT 75 (88)
T ss_dssp EEEEEE-ES--SSCCCEEEEEEGGGT----EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred EEEEEE-cC--CCcccEEEECcCCCC----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 466777 43 379999999887643 689999999999999999 9999999999999999999999999998778
Q ss_pred CeEEEEEEeCCc
Q psy1156 468 LNMDLLISRTSL 479 (671)
Q Consensus 468 ~~V~L~V~R~~~ 479 (671)
..+.|+|.|.+.
T Consensus 76 ~~v~l~v~R~g~ 87 (88)
T 2uzc_A 76 GSLNMTLQRESD 87 (88)
T ss_dssp SEEEEEEECCCC
T ss_pred CeEEEEEEeCCC
Confidence 899999998653
No 141
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.32 E-value=8.3e-12 Score=109.87 Aligned_cols=87 Identities=28% Similarity=0.413 Sum_probs=71.1
Q ss_pred eEEEeeCC--CCCcccEEEecCCCCC---------CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHH
Q psy1156 578 TIVFEKGP--GKKGLGFTIVGGKDSP---------RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEA 646 (671)
Q Consensus 578 ~V~L~K~~--g~~~LGfsL~Gg~ds~---------~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEA 646 (671)
.|.+.+.. ...+|||++.|+.+.. ....|++|..|.++|||+++| |++||+|++|||+++.+++|.++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 34444432 2246999999876642 234689999999999999999 99999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEEEeC
Q psy1156 647 ISLFKTIKNGSISLHICRR 665 (671)
Q Consensus 647 V~lLK~sg~~~VtL~V~Rr 665 (671)
+.+|+..+...|.|+|.|+
T Consensus 86 ~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 86 RKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHhCCCCEEEEEEEcC
Confidence 9999875546899999885
No 142
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=1.2e-11 Score=111.91 Aligned_cols=94 Identities=27% Similarity=0.320 Sum_probs=80.0
Q ss_pred CCeEEEEEEeCC-----CCCcccEEEeeecCCCC--CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHH
Q psy1156 386 EGQTMVRVNRRD-----FNEELGIYIAKIKNSSE--GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQ 458 (671)
Q Consensus 386 ~~~~~V~L~k~~-----~~~~LGfsI~gg~~~~~--g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~ 458 (671)
-.++.|+|.+.. ...+|||+|.++.+.+. +. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+
T Consensus 11 ~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~-~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 11 FPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGE-IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSC-EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCC-cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 355778887743 24799999999875431 12 58999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEeCCcc
Q psy1156 459 AKSIISSGPLNMDLLISRTSLK 480 (671)
Q Consensus 459 av~~L~~~g~~V~L~V~R~~~~ 480 (671)
++.+|+..+..|.|+|.|.+..
T Consensus 90 ~~~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 90 VQSIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHHHSCCSSCEEEEEESSCCC
T ss_pred HHHHHhcCCCEEEEEEEECCcc
Confidence 9999998889999999997653
No 143
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.32 E-value=2.3e-12 Score=109.11 Aligned_cols=80 Identities=24% Similarity=0.458 Sum_probs=71.0
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.+.. .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+..+
T Consensus 3 ~r~v~l~~~~--~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 71 (83)
T 2kv8_A 3 VRSVEVARGR--AGYGFTLSGQ-------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCS- 71 (83)
T ss_dssp EEEEEECCCS--SCCSCBCCCS-------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS-
T ss_pred cEEEEEEeCC--CcccEEEEcC-------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 4678998886 7899998754 378999999999999999 9999999999999999999999999998774
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
..|.|+|.|..
T Consensus 72 ~~v~l~v~R~~ 82 (83)
T 2kv8_A 72 GVLHMVIAEGV 82 (83)
T ss_dssp SCEEEEEECCC
T ss_pred CeEEEEEEcCC
Confidence 67999998864
No 144
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.32 E-value=7.4e-12 Score=110.70 Aligned_cols=83 Identities=25% Similarity=0.379 Sum_probs=73.2
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
+.|.|.+.+ ...|||.+..+.+. .|++|..|.++|||+++| |++||+|++|||++|.+++|.+++.+|+..+ .
T Consensus 3 r~v~l~~~~-~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g-~ 75 (106)
T 3ngh_A 3 RESKLSKQE-GQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG-N 75 (106)
T ss_dssp EEEEEECCT-TCCCCCEEECCTTC----CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTT-T
T ss_pred EEEEEEeCC-CCeeCEEEEEEeCC----CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-C
Confidence 578888886 37899999877553 489999999999999999 9999999999999999999999999998764 7
Q ss_pred cEEEEEEeCC
Q psy1156 657 SISLHICRRL 666 (671)
Q Consensus 657 ~VtL~V~Rr~ 666 (671)
.|.|+|.|+.
T Consensus 76 ~v~l~v~r~~ 85 (106)
T 3ngh_A 76 SVTLLVLDGD 85 (106)
T ss_dssp EEEEEEECHH
T ss_pred EEEEEEEECC
Confidence 8999998864
No 145
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.32 E-value=3.6e-12 Score=113.85 Aligned_cols=90 Identities=24% Similarity=0.401 Sum_probs=77.4
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
++++|.|.+. ...+|||+|.++.+. .+. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..
T Consensus 5 ~~~~v~l~k~-~~~~lG~~i~g~~~~-~~~-~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 5 NIITVTLNME-KYNFLGISIVGQSNE-RGD-GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp CEEEEEECHH-HHCCCCEEEEEECSS-TTC-CEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred eEEEEEEEeC-CCCccCEEEEcCcCC-CCC-CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 6788999873 358999999997642 122 7899999999999999999999999999999999999999999999855
Q ss_pred ---CCeEEEEEEeCCc
Q psy1156 467 ---PLNMDLLISRTSL 479 (671)
Q Consensus 467 ---g~~V~L~V~R~~~ 479 (671)
++.|.|+|.|...
T Consensus 82 ~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 82 VHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HTSSSCEEEEEECCCC
T ss_pred ccCCCeEEEEEEeCCC
Confidence 5679999998654
No 146
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.32 E-value=8e-12 Score=113.61 Aligned_cols=83 Identities=36% Similarity=0.520 Sum_probs=70.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
+.++|+|.|+. .+|||+|.++. .|.+|..|.+ +|..+| |++||+|++|||++|.+++|.+++++|+.++
T Consensus 12 ~~~~V~L~Kg~--~G~GFsI~~~~------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~ 80 (113)
T 3soe_A 12 LLVTIPLIKGP--KGFGFAIADSP------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFP 80 (113)
T ss_dssp EEEEEEEECBT--TBSSEEEEEET------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CEEEEEEEECC--CcccEEEeCCC------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 56789999986 79999997553 3788999998 465666 9999999999999999999999999999875
Q ss_pred -CCcEEEEEEeCCCC
Q psy1156 655 -NGSISLHICRRLKS 668 (671)
Q Consensus 655 -~~~VtL~V~Rr~~~ 668 (671)
...|+|+|.|....
T Consensus 81 ~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 81 VGADVPLLILRGGPP 95 (113)
T ss_dssp TTCEEEEEEEESSCC
T ss_pred CCCEEEEEEEECCcc
Confidence 35799999998754
No 147
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.32 E-value=9.4e-12 Score=107.06 Aligned_cols=84 Identities=31% Similarity=0.423 Sum_probs=72.2
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
+.|.+... .+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+.. ..
T Consensus 5 ~~v~~~~~---~~~G~~l~~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~ 76 (91)
T 2pkt_A 5 QQIDLQGP---GPWGFRLVGGKDFE---QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGC-TD 76 (91)
T ss_dssp EEEEEESS---SCCSEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-SS
T ss_pred EEEEECCC---CCCCEEEEccCCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-CC
Confidence 45666532 78999999876542 589999999999999999 999999999999999999999999999984 57
Q ss_pred cEEEEEEeCCCC
Q psy1156 657 SISLHICRRLKS 668 (671)
Q Consensus 657 ~VtL~V~Rr~~~ 668 (671)
.|.|+|.|+...
T Consensus 77 ~v~l~v~R~g~~ 88 (91)
T 2pkt_A 77 NLTLTVARSEHE 88 (91)
T ss_dssp EEEEEEEEECCC
T ss_pred eEEEEEEECCcc
Confidence 899999998754
No 148
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.32 E-value=1.4e-11 Score=105.88 Aligned_cols=83 Identities=24% Similarity=0.295 Sum_probs=72.7
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
.+++|+|.|.. .+|||++.++.+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 3 ~~r~v~l~r~~--~g~G~~~~~~~~~-----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 1g9o_A 3 LPRLCCLEKGP--NGYGFHLHGEKGK-----LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAA 74 (91)
T ss_dssp CCEEEEEECBT--TBCCEEEEECTTC-----SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC--CcccEEEEecCCC-----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45889998865 6899999987643 689999999999999999 999999999999999999999999999977
Q ss_pred CCeEEEEEEeC
Q psy1156 467 PLNMDLLISRT 477 (671)
Q Consensus 467 g~~V~L~V~R~ 477 (671)
++.+.+++.+.
T Consensus 75 ~~~~~~~~~~r 85 (91)
T 1g9o_A 75 LNAVRLLVVDP 85 (91)
T ss_dssp SSEEEEEEECC
T ss_pred CCcEEEEEEcC
Confidence 77777766654
No 149
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=7.8e-12 Score=108.51 Aligned_cols=84 Identities=32% Similarity=0.477 Sum_probs=72.3
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|+|. +. .+|||.+.++.+.. .|++|..|.+++||+++| |++||+|++|||++|.++++.+++.+++..+
T Consensus 9 ~~~v~l~-~~--~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g- 80 (94)
T 2eeg_A 9 PHSVTLR-GP--SPWGFRLVGGRDFS---APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCH- 80 (94)
T ss_dssp CEEEEEC-CS--SCCSCCEECCTTTT---SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCC-
T ss_pred eEEEEEe-CC--CccCEEEECccCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 4567773 33 68999999987653 579999999999999999 9999999999999999999999999998854
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+..
T Consensus 81 ~~v~l~v~R~g~ 92 (94)
T 2eeg_A 81 DHLTLSVSSGPS 92 (94)
T ss_dssp SCEEEEEECCSS
T ss_pred CeEEEEEEeCCC
Confidence 789999988754
No 150
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.32 E-value=1.1e-11 Score=111.34 Aligned_cols=90 Identities=30% Similarity=0.509 Sum_probs=76.0
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC-CC---cceeEEEeCCCCHHhH-hCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR-GA---IGIFIKSILDNGQAAE-DGRLKEGDEILAINGQVCHDLTHLEAISL 649 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~-g~---~GVfIssV~pgSpAar-aGrLr~GDrILeVNG~sV~~lSheEAV~l 649 (671)
..+.|.|.+.. ..+|||.|.++.+... +. .+++|..|.++|||++ +| |++||+|++|||++|.+++|.+++.+
T Consensus 10 ~~~~v~l~~~~-~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 10 QTSDVVIHRKE-NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCEEEEEECCT-TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred cceEEEEEECC-CCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45688898865 3799999998765432 11 2689999999999999 88 99999999999999999999999999
Q ss_pred HHhcCCCcEEEEEEeCCC
Q psy1156 650 FKTIKNGSISLHICRRLK 667 (671)
Q Consensus 650 LK~sg~~~VtL~V~Rr~~ 667 (671)
|+.. ...|.|+|.|+..
T Consensus 88 l~~~-g~~v~l~v~r~~~ 104 (114)
T 1uew_A 88 IKDA-GLSVTLRIIPQEE 104 (114)
T ss_dssp HHHT-TTEEEEEECCCSC
T ss_pred HHcC-CCeEEEEEEeCCc
Confidence 9985 4789999988764
No 151
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.32 E-value=4.9e-12 Score=113.98 Aligned_cols=94 Identities=28% Similarity=0.433 Sum_probs=81.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeecc-CCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLR-GLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~-~~s~~~av~~L 463 (671)
...++.|.|.+. ++++|||++.++.....+. .|++|..|.++|||+++|+|++||+|++|||+.+. ++++.+++.++
T Consensus 18 ~~~~~~v~l~k~-~~~~lG~~i~~~~~~~~~~-~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 18 GRHVEVFELLKP-PSGGLGFSVVGLRSENRGE-LGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISIL 95 (117)
T ss_dssp TSCEEEEEEECC-SSSCSSCCEEEEECCC--C-EEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHH
T ss_pred CCeEEEEEEEEC-CCCCCCEEEeecccCCCCC-CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHH
Confidence 357789999885 3689999999887543333 68999999999999999999999999999999998 99999999999
Q ss_pred hcCCCeEEEEEEeCCcc
Q psy1156 464 SSGPLNMDLLISRTSLK 480 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~ 480 (671)
+..+..|.|+|.|.+..
T Consensus 96 ~~~~~~v~l~v~R~~~~ 112 (117)
T 2o2t_A 96 QKAKDTVQLVIARGSLP 112 (117)
T ss_dssp HHCCSEEEEEEESSCCG
T ss_pred HcCCCEEEEEEEeCCcc
Confidence 98889999999997653
No 152
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.32 E-value=6e-12 Score=109.75 Aligned_cols=83 Identities=27% Similarity=0.444 Sum_probs=71.1
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
+.+.+.+.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+..
T Consensus 11 ~~~~l~~~~--~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 11 RLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp EEEEEECTT--TCCCEEEECCCSS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred EEEEEEeCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 567888875 7899999887643 389999999999999999 999999999999999988999999999987534
Q ss_pred cEEEEEEeCC
Q psy1156 657 SISLHICRRL 666 (671)
Q Consensus 657 ~VtL~V~Rr~ 666 (671)
.+.|+|.|+.
T Consensus 84 ~~~l~v~R~g 93 (98)
T 2jxo_A 84 TKLLVVDRET 93 (98)
T ss_dssp EEEEECCHHH
T ss_pred EEEEEEECCc
Confidence 5668887753
No 153
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.32 E-value=1e-11 Score=111.57 Aligned_cols=89 Identities=21% Similarity=0.392 Sum_probs=77.9
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+.+.|+|.+.. .+|||++.++.+.. .|++|..|.++|||+++|.|++||+|++|||+.|.++++.+++.+++
T Consensus 22 ~~~~~~v~l~~~~--~glG~~l~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 95 (112)
T 2r4h_A 22 SMDFYTVELERGA--KGFGFSLRGGREYN----MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIK 95 (112)
T ss_dssp -CCEEEEEEECBT--TBTSEEEEECGGGT----CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCceEEEEEEcCC--CccCEEEeccccCC----CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4567889998754 78999999876433 68999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..|.|+|.|.+.
T Consensus 96 ~~g~~v~l~v~R~~~ 110 (112)
T 2r4h_A 96 NGGRRVRLFLKRGET 110 (112)
T ss_dssp TTTTEEEEEEECCEE
T ss_pred cCCCeEEEEEEeCCc
Confidence 888899999988653
No 154
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=5.1e-12 Score=111.78 Aligned_cols=85 Identities=18% Similarity=0.319 Sum_probs=74.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.. .+|||.|.+.... .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+++..+
T Consensus 8 ~~r~v~l~k~~--~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 80 (106)
T 2eei_A 8 QPRLCYLVKEG--GSYGFSLKTVQGK----KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSG 80 (106)
T ss_dssp SSEEEEEECCS--SSCSCCEECCSSC----CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHC
T ss_pred CCEEEEEEECC--CCCCEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34689999864 8999999876542 489999999999999999 9999999999999999999999999998774
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..+.|+|.|+..
T Consensus 81 -~~v~l~v~r~~~ 92 (106)
T 2eei_A 81 -SRVMFLLVDKET 92 (106)
T ss_dssp -SEEEEEECCTTT
T ss_pred -CeEEEEEEcCch
Confidence 789999988764
No 155
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=8.7e-12 Score=110.78 Aligned_cols=91 Identities=29% Similarity=0.431 Sum_probs=80.0
Q ss_pred CCeEEEEEEeCCCCCcccEEEe-----eecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIA-----KIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAK 460 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~-----gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av 460 (671)
...+.|.|.+.. .+|||+|. ++.+...+. .|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++
T Consensus 8 ~~~~~v~l~k~~--~~lG~~i~~~~~~gg~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~ 84 (108)
T 1q7x_A 8 GDIFEVELAKND--NSLGISVTVLFDKGGVNTSVRH-GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAV 84 (108)
T ss_dssp SSEEEEEEESSS--CSCCEEESSSSSSBCBCTTSSS-CCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHH
T ss_pred CcEEEEEEEECC--CCccEEEEEeccCCCccccCCC-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 467889998854 89999999 766543333 7899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeEEEEEEeCCc
Q psy1156 461 SIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 461 ~~L~~~g~~V~L~V~R~~~ 479 (671)
.+++..+..+.|+|.|.+.
T Consensus 85 ~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 85 ETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHHHTTSEEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEeCCc
Confidence 9999888999999999764
No 156
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=1.3e-11 Score=111.07 Aligned_cols=86 Identities=27% Similarity=0.397 Sum_probs=74.9
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.|.. ..+|||.+.+.. .|++|..|.++|||+++|.|++||+|++|||++|.++++.+++.+|+..+
T Consensus 25 ~~~~v~l~k~~-~~~lG~~i~~~~------~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 97 (113)
T 1va8_A 25 TVKIVRIEKAR-DIPLGATVRNEM------DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH 97 (113)
T ss_dssp ECEEEEEEECT-TCCCCEEEEECS------SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred ceEEEEEEeCC-CCceeEEEEeCC------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 55679999986 358999998762 48999999999999999933999999999999999999999999999875
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
+.|.|+|.|....
T Consensus 98 -~~v~l~v~r~~~~ 110 (113)
T 1va8_A 98 -GTLTFVLIPSSGP 110 (113)
T ss_dssp -EEEEEEEECCCCC
T ss_pred -CeEEEEEEECCcc
Confidence 7899999987654
No 157
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=7.2e-12 Score=107.93 Aligned_cols=86 Identities=24% Similarity=0.478 Sum_probs=75.3
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..++|+|.|.. .+|||++.++.+.. .+++|..|.+++||+++|.|++||+|++|||+.+.++++.+++.+++..
T Consensus 5 ~~r~v~l~k~~--~glG~~l~~~~~~~----~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 78 (93)
T 2dkr_A 5 SSGVVELPKTD--EGLGFNIMGGKEQN----SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAA 78 (93)
T ss_dssp CSCEEEEECCT--TCCCEEEECSSSSS----CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CCEEEEEEeCC--CCccEEEecccCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45789998854 89999999876433 6899999999999999955999999999999999999999999999877
Q ss_pred CCeEEEEEEeCC
Q psy1156 467 PLNMDLLISRTS 478 (671)
Q Consensus 467 g~~V~L~V~R~~ 478 (671)
+..+.|+|.|..
T Consensus 79 ~~~v~l~v~r~~ 90 (93)
T 2dkr_A 79 QGSVKLVVRSGP 90 (93)
T ss_dssp CSEEEEEECCCC
T ss_pred CCcEEEEEEeCC
Confidence 788999998764
No 158
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.31 E-value=8.3e-12 Score=114.78 Aligned_cols=96 Identities=25% Similarity=0.477 Sum_probs=81.0
Q ss_pred CCCCeEEEEEEeCCCCCcccEEEeeecCCC---CC--CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHH
Q psy1156 384 SQEGQTMVRVNRRDFNEELGIYIAKIKNSS---EG--NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQ 458 (671)
Q Consensus 384 ~~~~~~~V~L~k~~~~~~LGfsI~gg~~~~---~g--~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~ 458 (671)
....++.|+|.+...+++|||+|.++.+.. .+ ...|++|..|.++|||+++|+|++||+|++|||+.|.++++.+
T Consensus 26 ~~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 26 LPETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp SCTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CCCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 356778999998655689999999875311 00 0148999999999999999989999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEeCCc
Q psy1156 459 AKSIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 459 av~~L~~~g~~V~L~V~R~~~ 479 (671)
++.+++..+..|.|+|.|.+.
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHcCCCeEEEEEEECCc
Confidence 999998888889999998764
No 159
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=2.4e-11 Score=106.63 Aligned_cols=88 Identities=26% Similarity=0.485 Sum_probs=75.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ...|||.+.+..+.. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+++. +
T Consensus 10 ~~~~v~l~~~~-~~~lG~~~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~ 83 (100)
T 2eeh_A 10 IIHSVRVEKSP-AGRLGFSVRGGSEHG---LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-S 83 (100)
T ss_dssp EECCEEECCCS-SSSCSEEEECCTTTT---CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-C
T ss_pred eEEEEEEEECC-CCCccEEEEccccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-C
Confidence 45678888876 367999999875432 589999999999999999 99999999999999999899999999987 3
Q ss_pred CCcEEEEEEeCCCCC
Q psy1156 655 NGSISLHICRRLKSK 669 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~ 669 (671)
..|.|+|.|+....
T Consensus 84 -~~v~l~v~R~g~~p 97 (100)
T 2eeh_A 84 -SRLHMMVRRMGSGP 97 (100)
T ss_dssp -SSEEEEEEECSCCC
T ss_pred -CEEEEEEEECCcCC
Confidence 78999999987654
No 160
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.31 E-value=1.6e-11 Score=110.39 Aligned_cols=87 Identities=26% Similarity=0.455 Sum_probs=76.3
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|+|.|.. .++|||.+.+.. .|++|..|.+++||+++|.|++||+|++|||+.|.++++.+++.+|+
T Consensus 23 ~~~~~~v~l~k~~-~~~lG~~i~~~~-------~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~ 94 (113)
T 1va8_A 23 GETVKIVRIEKAR-DIPLGATVRNEM-------DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLS 94 (113)
T ss_dssp TEECEEEEEEECT-TCCCCEEEEECS-------SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CCceEEEEEEeCC-CCceeEEEEeCC-------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3467889999863 569999998752 68999999999999999944999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..++.+.|+|.|.+.
T Consensus 95 ~~~~~v~l~v~r~~~ 109 (113)
T 1va8_A 95 DMHGTLTFVLIPSSG 109 (113)
T ss_dssp HCCEEEEEEEECCCC
T ss_pred cCCCeEEEEEEECCc
Confidence 777899999998765
No 161
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.31 E-value=1.7e-11 Score=112.26 Aligned_cols=91 Identities=27% Similarity=0.509 Sum_probs=75.9
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCC------CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPR------GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISL 649 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~------g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~l 649 (671)
.+.|.+.+.. ...|||.+.++.+... ...|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+
T Consensus 25 p~~v~l~k~~-~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 25 PRRVELWREP-SKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp CEEEEECCCT-TSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CEEEEEEecC-CCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3578888775 4789999987654221 13589999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEEEEeCCCC
Q psy1156 650 FKTIKNGSISLHICRRLKS 668 (671)
Q Consensus 650 LK~sg~~~VtL~V~Rr~~~ 668 (671)
|+..+ +.|.|+|.|..+.
T Consensus 104 l~~~~-~~v~l~v~r~~~~ 121 (123)
T 2iwq_A 104 IRKAG-NPVVFMVQSIIST 121 (123)
T ss_dssp HHHCC-SSEEEEEECCCCC
T ss_pred HHcCC-CeEEEEEEECCcC
Confidence 99885 6999999887654
No 162
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.31 E-value=1.1e-11 Score=111.87 Aligned_cols=85 Identities=36% Similarity=0.602 Sum_probs=75.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.+.++.+. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 14 ~~~~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 87 (119)
T 1tp5_A 14 EPRRIVIHRGS--TGLGFNIVGGEDG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 87 (119)
T ss_dssp SCEEEEEECTT--SCCCEEEEECGGG----CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred ccEEEEEEECC--CCccEEEecCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45689999876 6799999987642 48999999999999999999999999999999999999999999998864
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 88 -~~v~l~v~r~~ 98 (119)
T 1tp5_A 88 -QTVTIIAQYKP 98 (119)
T ss_dssp -SEEEEEEEECH
T ss_pred -CeEEEEEEECC
Confidence 78999998864
No 163
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.31 E-value=1.5e-11 Score=105.00 Aligned_cols=84 Identities=23% Similarity=0.363 Sum_probs=73.2
Q ss_pred EEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCe
Q psy1156 390 MVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLN 469 (671)
Q Consensus 390 ~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~ 469 (671)
.+++.+.. ..+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++.....
T Consensus 3 ~~~v~~~~-~~~lG~~l~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 76 (87)
T 2pa1_A 3 ALTVDVAG-PAPWGFRITGGRDFH----TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSP 76 (87)
T ss_dssp EEEEEECS-SSCCSEEEEEEGGGT----EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSS
T ss_pred EEEEEECC-CCccCEEEecccCCC----CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45555543 589999999887543 689999999999999999 999999999999999999999999999977789
Q ss_pred EEEEEEeCCc
Q psy1156 470 MDLLISRTSL 479 (671)
Q Consensus 470 V~L~V~R~~~ 479 (671)
+.|+|.|.+.
T Consensus 77 v~l~v~R~~~ 86 (87)
T 2pa1_A 77 LRLQLDRITS 86 (87)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEEecCC
Confidence 9999999764
No 164
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.31 E-value=1.4e-11 Score=118.88 Aligned_cols=90 Identities=38% Similarity=0.657 Sum_probs=79.5
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC--CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR--GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~--g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
+.+.|+|.+.. .+|||+|.++.+.+. +..|++|..|.|+|||+++|+|++||+|++|||++|.++++.+++.+++.
T Consensus 5 ~~~~v~l~~~~--~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 82 (196)
T 3gsl_A 5 EYEEITLERGN--SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 82 (196)
T ss_dssp EEEEEEEECBT--TBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEEEECC--CCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 56789999886 789999999877542 24689999999999999999999999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCCC
Q psy1156 653 IKNGSISLHICRRLK 667 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~ 667 (671)
.+ ..|.|+|.|+.+
T Consensus 83 ~g-~~v~l~v~r~~~ 96 (196)
T 3gsl_A 83 AG-SIVRLYVMRRKP 96 (196)
T ss_dssp SC-SEEEEEEEEECC
T ss_pred CC-CcEEEEEEecCC
Confidence 75 789999988764
No 165
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.31 E-value=1.8e-11 Score=111.70 Aligned_cols=90 Identities=19% Similarity=0.236 Sum_probs=78.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....+.|+|.+. ..+|||+|.++.+.. .|++|..|.+++||+++|.|++||+|++|||+.|.++++.+++.+|+
T Consensus 17 ~~~~~~v~l~~~--~~glG~~~~~g~~~~----~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 17 KGTFLSTTLKKS--NMGFGFTIIGGDEPD----EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQ 90 (123)
T ss_dssp CSEEEEEEEECC--TTSCSEEEECCSSSS----CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCcEEEEEEEeC--CCceeEEEecccCCC----CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456678888875 479999999866432 68999999999999999999999999999999999999999999999
Q ss_pred c--CCCeEEEEEEeCCcc
Q psy1156 465 S--GPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~--~g~~V~L~V~R~~~~ 480 (671)
. .+..|.|+|.|....
T Consensus 91 ~~~~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 91 SVPIGQSVNLVLCRGYPL 108 (123)
T ss_dssp TSCTTCEEEEEEEESCCC
T ss_pred hCCCCCeEEEEEEeCCCC
Confidence 6 478999999997653
No 166
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.31 E-value=1.5e-11 Score=106.67 Aligned_cols=84 Identities=27% Similarity=0.554 Sum_probs=73.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..++.
T Consensus 8 ~~r~v~l~~~~--~~~G~~l~~~-------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-- 75 (93)
T 2dls_A 8 VQRCVIIQKDQ--HGFGFTVSGD-------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS-- 75 (93)
T ss_dssp CEEEEEEECSS--SSCCEEEECS-------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS--
T ss_pred CCEEEEEEeCC--CceeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC--
Confidence 45678888876 7899999753 379999999999999999 99999999999999999999999998874
Q ss_pred CCcEEEEEEeCCCCCC
Q psy1156 655 NGSISLHICRRLKSKK 670 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~~ 670 (671)
...|.|+|.|+....+
T Consensus 76 g~~v~l~v~R~~~~~~ 91 (93)
T 2dls_A 76 GAYVALTLLGSSSGPS 91 (93)
T ss_dssp SSEEEEEEECCCCCSS
T ss_pred CCEEEEEEEECCCCCC
Confidence 3789999999876554
No 167
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.31 E-value=8.8e-12 Score=106.91 Aligned_cols=84 Identities=24% Similarity=0.386 Sum_probs=73.6
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|.|.+.. .+|||++.++.+.. .+++|..|.++|||+++|.|++||+|++|||+++.+.++.+++.+++..+
T Consensus 3 ~~~v~l~~~~--~g~G~~~~~g~~~~----~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2q9v_A 3 EQDIFLWRKE--TGFGFRILGGNEPG----EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA 76 (90)
T ss_dssp EEEEEEECBT--TBCCEEEEECSSTT----SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred cEEEEEEECC--CccCEEEEccccCC----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4678888754 78999999876543 67999999999999999999999999999999999999999999998653
Q ss_pred --CeEEEEEEeC
Q psy1156 468 --LNMDLLISRT 477 (671)
Q Consensus 468 --~~V~L~V~R~ 477 (671)
..+.|+|.|.
T Consensus 77 ~~~~v~l~v~R~ 88 (90)
T 2q9v_A 77 KQGHVNLTVRQT 88 (90)
T ss_dssp HHTEEEEEEEEC
T ss_pred CCCeEEEEEEec
Confidence 4899999885
No 168
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.30 E-value=2.2e-11 Score=106.03 Aligned_cols=88 Identities=26% Similarity=0.415 Sum_probs=77.0
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.+.. .+|||++.++.+... .|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 4 ~~~~v~l~~~~--~~lG~~l~~~~~~~~---~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 78 (98)
T 2opg_A 4 CETTIEISKGR--TGLGLSIVGGSDTLL---GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT 78 (98)
T ss_dssp EEEEEEEECBT--TBTCEEEEECTTSTT---CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CEEEEEEEECC--CcccEEEecCCCCCC---CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 35778888754 799999998765321 4899999999999999999999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 79 ~~~v~l~v~R~~~ 91 (98)
T 2opg_A 79 PQRVRLTLYRDEA 91 (98)
T ss_dssp CSEEEEEEEECSS
T ss_pred CCeEEEEEEcCCC
Confidence 7899999999765
No 169
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.30 E-value=1.7e-11 Score=103.99 Aligned_cols=82 Identities=24% Similarity=0.317 Sum_probs=71.1
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC--
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG-- 466 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~-- 466 (671)
+.|+|.|.. .+|||.+.++.+.. .+++|..|.+++||+++|.|++||+|++|||+++.++++.++..+++..
T Consensus 2 ~~v~l~k~~--~g~G~~i~~~~~~~----~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 75 (85)
T 2i04_A 2 IHTKLRKSS--RGFGFTVVGGDEPD----EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPI 75 (85)
T ss_dssp EEEEEECBT--TBSSEEEEECCSTT----BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCT
T ss_pred EEEEEEECC--CCCCEEEEcccCCC----CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 467787754 78999999865432 6899999999999999999999999999999999999999999999865
Q ss_pred CCeEEEEEEe
Q psy1156 467 PLNMDLLISR 476 (671)
Q Consensus 467 g~~V~L~V~R 476 (671)
+..+.|+|.|
T Consensus 76 g~~v~l~v~R 85 (85)
T 2i04_A 76 GASVDLELCR 85 (85)
T ss_dssp TCEEEEEEEC
T ss_pred CCeEEEEEEC
Confidence 6788998865
No 170
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.30 E-value=2e-11 Score=105.55 Aligned_cols=88 Identities=30% Similarity=0.529 Sum_probs=73.3
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCC-CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPR-GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~-g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
...|.+.+.. .+|||.+.+..+... ...|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..
T Consensus 5 ~~~v~l~~~~--~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~- 81 (97)
T 2iwn_A 5 TFDVELTKNV--QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT- 81 (97)
T ss_dssp EEEEEEECBT--TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC-
T ss_pred EEEEEEecCC--CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 4567776664 789999998754221 235899999999999999999999999999999999999999999999885
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
...|.|+|.|+.
T Consensus 82 ~~~v~l~v~r~g 93 (97)
T 2iwn_A 82 GQTVLLTLMRRG 93 (97)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEeCC
Confidence 478999998865
No 171
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=8.4e-12 Score=108.15 Aligned_cols=83 Identities=27% Similarity=0.292 Sum_probs=71.7
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.|.. ..+|||++.+. ..|++|..|.++|||+++|.|++||+|++|||++| +.++.+++.+|+..+
T Consensus 7 ~r~v~l~k~~-~~~lG~~i~~~------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~- 77 (91)
T 2e7k_A 7 GRMVGIRKTA-GEHLGVTFRVE------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNAS- 77 (91)
T ss_dssp SCBCCBCCCT-TCCCCEEEEES------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCC-
T ss_pred cEEEEEEECC-CCcEeEEEEec------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCC-
Confidence 4567787765 47899999873 24899999999999999988999999999999999 889999999999874
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
+.|.|+|.|...
T Consensus 78 ~~v~l~v~~~~~ 89 (91)
T 2e7k_A 78 GSVILKILSGPS 89 (91)
T ss_dssp SSBCEEEECCSC
T ss_pred CeEEEEEEECCc
Confidence 789999988653
No 172
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=112.52 Aligned_cols=91 Identities=25% Similarity=0.411 Sum_probs=80.0
Q ss_pred CCCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 384 SQEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 384 ~~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
....++.|.|.+. ..+|||+|.++.+.. . .|++|..|.++|||+++|+|++||+|++|||+.|.++++.+++.++
T Consensus 22 ~~~~~~~v~l~k~--~~glG~~l~~~~~~~--~-~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~ 96 (124)
T 2daz_A 22 LPGELHIIELEKD--KNGLGLSLAGNKDRS--R-MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAII 96 (124)
T ss_dssp SSSEEEEEEEECC--SSCCCEEEECBSSTT--S-CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHH
T ss_pred CCCceEEEEEEeC--CCccCEEEeccCCCC--c-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3457788999885 379999999876532 1 6899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..|.|+|.|.+.
T Consensus 97 ~~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 97 KTAPSKVKLVFIRNED 112 (124)
T ss_dssp HHSCSEEEEEEEECTT
T ss_pred HcCCCeEEEEEEeCCC
Confidence 8888899999999765
No 173
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.30 E-value=1.3e-11 Score=111.93 Aligned_cols=86 Identities=28% Similarity=0.436 Sum_probs=71.3
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc---
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI--- 653 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s--- 653 (671)
+.+.+.+. .+|||+|.++.+... .+++|..|.++|||+++|.|++||+|++|||++|.+++|.+++.+|+..
T Consensus 20 ~~~~~~~~---~glG~~i~gg~~~~~--~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 20 RLLRIKKE---GSLDLALEGGVDSPV--GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp EEEEEESC---SCCCCEEEEBTTSSS--CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred EEEEECCC---CccCEEEEcccCCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 44555544 589999999876542 2499999999999999955999999999999999999999999999875
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
+...|.|+|.|..+
T Consensus 95 ~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 95 GGDWIDLVVAVCPP 108 (118)
T ss_dssp TCSEEEEEEECCCS
T ss_pred CCCeEEEEEEeCCc
Confidence 23689999999653
No 174
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.30 E-value=1.9e-11 Score=113.41 Aligned_cols=93 Identities=22% Similarity=0.295 Sum_probs=78.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC-------C-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE-------G-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTM 456 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~-------g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~ 456 (671)
....+.|+|.|.. .++|||+|.++..... . ...|++|..|.+||||+++| |++||+|++|||+.|.++++
T Consensus 25 ~~~~r~v~l~r~~-~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~ 102 (132)
T 3l4f_D 25 IIKEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 102 (132)
T ss_dssp CCCCCEEEEECCT-TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCH
T ss_pred CCCCEEEEEEECC-CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3455789998853 5899999999875310 0 01379999999999999999 99999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEEEeCCc
Q psy1156 457 TQAKSIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 457 ~~av~~L~~~g~~V~L~V~R~~~ 479 (671)
.+++.+++..+..+.|+|.+...
T Consensus 103 ~~~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 103 RQVVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHHHHcCCCEEEEEEEECCC
Confidence 99999999888999999988654
No 175
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.30 E-value=3.2e-12 Score=112.24 Aligned_cols=87 Identities=36% Similarity=0.688 Sum_probs=74.5
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.+.+.+.. .+|||.+.++.+.. .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 12 ~~~v~l~~~~--~g~G~~~~~~~~~~---~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g- 85 (103)
T 1wfv_A 12 YFTVDMEKGA--KGFGFSIRGGREYK---MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGG- 85 (103)
T ss_dssp CEECCEECCT--TSSSBCCEEETTTT---EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHC-
T ss_pred EEEEEEecCC--CcCCEEEeccccCC---CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 3466776665 68999999876543 48999999999999999999999999999999999999999999998664
Q ss_pred CcEEEEEEeCCCC
Q psy1156 656 GSISLHICRRLKS 668 (671)
Q Consensus 656 ~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|+...
T Consensus 86 ~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 86 RRVRLLLKRGTGS 98 (103)
T ss_dssp SEECEEEECTTCS
T ss_pred CeEEEEEEECCCC
Confidence 7899999987643
No 176
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=109.73 Aligned_cols=82 Identities=24% Similarity=0.332 Sum_probs=72.7
Q ss_pred CCCcccEEEeeecCCCCC-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEe
Q psy1156 398 FNEELGIYIAKIKNSSEG-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISR 476 (671)
Q Consensus 398 ~~~~LGfsI~gg~~~~~g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R 476 (671)
...+|||+|.+|.+.... ...|++|..|.++|||+++|+|++||+|++|||+.|.++++.+++.+++..+..|.|+|.|
T Consensus 11 ~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R 90 (106)
T 4amh_A 11 GSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAK 90 (106)
T ss_dssp -CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEEC
T ss_pred CCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEe
Confidence 358999999999875421 1258999999999999999999999999999999999999999999999888999999999
Q ss_pred CCc
Q psy1156 477 TSL 479 (671)
Q Consensus 477 ~~~ 479 (671)
.+.
T Consensus 91 ~~~ 93 (106)
T 4amh_A 91 PGS 93 (106)
T ss_dssp CSS
T ss_pred CCC
Confidence 765
No 177
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.30 E-value=1.8e-11 Score=108.33 Aligned_cols=90 Identities=28% Similarity=0.532 Sum_probs=76.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC---CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR---GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFK 651 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~---g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK 651 (671)
..+.|.|.|.+ ..+|||+|.++.+.+. +..|++|..|.++|||+ +| |++||+|++|||++|.++++.+++..++
T Consensus 7 ~~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (107)
T 2h2b_A 7 EQHTVTLHRAP-GFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQLR 83 (107)
T ss_dssp EEEEEEEECBT-TTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eeEEEEEEeCC-CCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHHhh
Confidence 55789999885 3799999998876431 34599999999999999 88 9999999999999999999999988888
Q ss_pred hcCCCcEEEEEEeCCCC
Q psy1156 652 TIKNGSISLHICRRLKS 668 (671)
Q Consensus 652 ~sg~~~VtL~V~Rr~~~ 668 (671)
..+ ..|.|+|.|+...
T Consensus 84 ~~g-~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 84 KSG-KNAKITIRRKKGG 99 (107)
T ss_dssp TCC-SEEEEEEEEESCC
T ss_pred CCC-CEEEEEEEECCCC
Confidence 654 7899999987653
No 178
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1.7e-11 Score=109.92 Aligned_cols=90 Identities=24% Similarity=0.405 Sum_probs=77.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|+|.|. .+|||+|.++.+... . .+++|..|.+++||+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 13 ~~~~~~v~l~k~---~glG~~i~gg~~~~~-~-~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~ 87 (109)
T 1wi4_A 13 DPAFRVITVTKE---TGLGLKILGGINRNE-G-PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIIT 87 (109)
T ss_dssp CTTEEEEEECCS---SCCCEEEEECSSSSS-C-SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHH
T ss_pred CCcEEEEEEeCC---CccCEEEEeccCCCC-C-CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457888999773 799999999875431 1 47999999999999999999999999999999999999999999998
Q ss_pred cC----CCeEEEEEEeCCc
Q psy1156 465 SG----PLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~----g~~V~L~V~R~~~ 479 (671)
.. +..+.|.|.|.+.
T Consensus 88 ~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 88 RAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp HSCCSSSSCEEEEEECCCC
T ss_pred ccccCCCceEEEEEEeCCC
Confidence 54 4778999988654
No 179
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.29 E-value=9.4e-12 Score=110.13 Aligned_cols=92 Identities=29% Similarity=0.533 Sum_probs=78.5
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCC---CCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSS---EGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKS 461 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~---~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~ 461 (671)
..+.+.|+|.+.. .+|||+|.++.+.. .++ .|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.
T Consensus 5 ~~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~~~-~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 81 (105)
T 1wha_A 5 SSGRHVACLARSE--RGLGFSIAGGKGSTPYRAGD-AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVS 81 (105)
T ss_dssp CCEEEEEEECCCT--TCCSCEEECCTTSCCSSTTC-CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCeeEEEEEEeCC--CccCEEEEeccCCCcccCCC-CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3456778887754 68999999876521 122 68999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeCCc
Q psy1156 462 IISSGPLNMDLLISRTSL 479 (671)
Q Consensus 462 ~L~~~g~~V~L~V~R~~~ 479 (671)
+++..+..+.|+|.|...
T Consensus 82 ~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 82 LLTAASPTIALLLEREAG 99 (105)
T ss_dssp HHTSCCSCEEEEEEECCC
T ss_pred HHHcCCCeEEEEEEECCC
Confidence 999878899999999754
No 180
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.29 E-value=1.9e-11 Score=106.21 Aligned_cols=89 Identities=19% Similarity=0.327 Sum_probs=76.5
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|+|.+.. .+|||++.+..... +. .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++..
T Consensus 3 ~~r~v~l~k~~--~~~G~~l~~~~~~~-~~-~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (96)
T 2v90_A 3 KPRCLHLEKGP--QGFGFLLREEKGLD-GR-PGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ 77 (96)
T ss_dssp CCEEEEEECBT--TBSCEEEEEEECTT-SC-EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCEEEEEEeCC--CcccEEEEeccCCC-CC-CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45889998864 69999998744221 11 589999999999999999 999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCcc
Q psy1156 467 PLNMDLLISRTSLK 480 (671)
Q Consensus 467 g~~V~L~V~R~~~~ 480 (671)
+..+.|+|.|.+..
T Consensus 78 g~~v~l~v~r~~~~ 91 (96)
T 2v90_A 78 GSCVSLTVVDPEAD 91 (96)
T ss_dssp TTEEEEEEECCCTT
T ss_pred CCEEEEEEECCCCc
Confidence 88999999997653
No 181
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.29 E-value=8.2e-12 Score=110.00 Aligned_cols=87 Identities=33% Similarity=0.546 Sum_probs=73.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCC---C--CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHH
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDS---P--RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISL 649 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds---~--~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~l 649 (671)
....|.+.+. .+|||+|.++.+. + ....|++|..|.++|||++ | |++||+|++|||++|.++++.+++.+
T Consensus 11 ~~~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 11 QEIRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp CCEEEEEECS---SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred EEEEEEEccC---CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3456777775 4799999997642 1 1346899999999999999 8 99999999999999999999999999
Q ss_pred HHhcCCCcEEEEEEeCCC
Q psy1156 650 FKTIKNGSISLHICRRLK 667 (671)
Q Consensus 650 LK~sg~~~VtL~V~Rr~~ 667 (671)
++..+ ..|.|+|.|+..
T Consensus 86 ~~~~g-~~v~l~v~R~~~ 102 (103)
T 1n7t_A 86 LKTFQ-NTVELIIVREVS 102 (103)
T ss_dssp HHHCC-SEEEEEEECCCC
T ss_pred hhcCC-CeEEEEEEecCC
Confidence 99764 789999999764
No 182
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.29 E-value=1.1e-11 Score=109.79 Aligned_cols=88 Identities=18% Similarity=0.266 Sum_probs=76.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcC-CCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEG-CLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG-~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
..+++.|.|.+. ..++|||.+.++.+.. .+++|..|.++|||+++| +|++||+|++|||+.|.++++.+++.++
T Consensus 15 ~~~~~~v~l~~~-~~~~~G~~~~gg~~~~----~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i 89 (107)
T 3nfk_A 15 HDNLVLIRMKPD-ENGRFGFNVKGGYDQK----MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFI 89 (107)
T ss_dssp -CCCEEEEECCC-TTSCCCEEEEEEGGGT----EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEEEcC-CCCCCCEEEEccCCCC----CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 457889999875 3589999999886543 689999999999999999 5999999999999999999999999999
Q ss_pred hcCCC----eEEEEEEeC
Q psy1156 464 SSGPL----NMDLLISRT 477 (671)
Q Consensus 464 ~~~g~----~V~L~V~R~ 477 (671)
+..+. .|.|+|.|+
T Consensus 90 ~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 90 KASCERHSGELMLLVRPN 107 (107)
T ss_dssp HCGGGSBTTBEEEEEECC
T ss_pred HhccccCCcEEEEEEEcC
Confidence 97654 899999763
No 183
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.29 E-value=1.1e-11 Score=106.66 Aligned_cols=80 Identities=28% Similarity=0.447 Sum_probs=72.2
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCC
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPL 468 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~ 468 (671)
..|.|.+.+..+.|||.+. .|++|..|.+||||+++|+|++||+|++|||+++.++++++++.+++..++
T Consensus 2 l~v~l~~~~~~~~~G~~~~----------~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~ 71 (88)
T 3e17_A 2 IGVLLMKSRANEEYGLRLG----------SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG 71 (88)
T ss_dssp EEEEEECBTTBCCCCEEEE----------EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT
T ss_pred eEEEEEeCCCCCCCCEEEe----------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4677888677789999997 579999999999999999999999999999999999999999999998899
Q ss_pred eEEEEEEeCC
Q psy1156 469 NMDLLISRTS 478 (671)
Q Consensus 469 ~V~L~V~R~~ 478 (671)
.+.|+|.+..
T Consensus 72 ~v~L~v~~~~ 81 (88)
T 3e17_A 72 KLQLVVLRDL 81 (88)
T ss_dssp EEEEEECCC-
T ss_pred eEEEEEeCCC
Confidence 9999997643
No 184
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.29 E-value=6.8e-12 Score=129.63 Aligned_cols=89 Identities=27% Similarity=0.392 Sum_probs=77.8
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
...+.|.|.|.. ..+|||.|.|+.+.. .|+||..|.++|||+++++|++||+|++|||++|.+++|.+++.+|+..
T Consensus 76 ~~~r~V~L~k~~-~~glGf~I~gg~d~~---~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~ 151 (263)
T 1z87_A 76 LQRRRVTVRKAD-AGGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 151 (263)
T ss_dssp CSSEEECCCTTT-TCCCCCEEEEETTTT---EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC
T ss_pred CccEEEEEEeCC-CCCEeEEEeeccCCC---CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC
Confidence 356789999875 389999999987643 5899999999999999533999999999999999999999999999998
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
+ +.|.|+|.|...
T Consensus 152 g-~~V~L~V~R~~~ 164 (263)
T 1z87_A 152 G-KEVVLEVKYMKE 164 (263)
T ss_dssp C-SCCCEEEECCSS
T ss_pred C-CeEEEEEEeCcc
Confidence 5 789999998754
No 185
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.29 E-value=1.7e-11 Score=105.08 Aligned_cols=83 Identities=22% Similarity=0.315 Sum_probs=71.9
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCC
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPL 468 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~ 468 (671)
+.|++.. ..+|||++.++.+.. .|++|..|.+++||+++| |++||+|++|||+++.++++.++..+++..+.
T Consensus 5 ~~v~~~~---~~~~G~~l~gg~~~~----~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~ 76 (89)
T 2q3g_A 5 FKVVLEG---PAPWGFRLQGGKDFN----VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGE 76 (89)
T ss_dssp EEEEEES---SSCCCEEEEEEGGGT----EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTT
T ss_pred EEEEEcC---CCcccEEEECcCCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4455532 389999999877543 689999999999999999 99999999999999999999999999987788
Q ss_pred eEEEEEEeCCc
Q psy1156 469 NMDLLISRTSL 479 (671)
Q Consensus 469 ~V~L~V~R~~~ 479 (671)
.+.|+|.|.+.
T Consensus 77 ~v~l~v~R~~~ 87 (89)
T 2q3g_A 77 RLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEeCCC
Confidence 99999988654
No 186
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.29 E-value=2.1e-11 Score=111.24 Aligned_cols=85 Identities=19% Similarity=0.287 Sum_probs=76.2
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|+|.+. ..++|||++.++.+.. .+++|..|.+||||+++|+|++||+|++|||+.+.++++.+++.+++..+
T Consensus 20 ~~~v~l~k~-~~~~lG~~i~gg~~~~----~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 94 (125)
T 3hpk_A 20 PGKVTLQKD-AQNLIGISIGGGAQYC----PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 94 (125)
T ss_dssp EEEEEEECC-TTSCCCEEEEECSSCC----SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CeEEEEEeC-CCCCcCEEEeccCCCC----CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 467888774 4689999999987643 68999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeC
Q psy1156 468 LNMDLLISRT 477 (671)
Q Consensus 468 ~~V~L~V~R~ 477 (671)
+.|.|+|.|.
T Consensus 95 ~~v~l~v~r~ 104 (125)
T 3hpk_A 95 GEVTIHYNKL 104 (125)
T ss_dssp SEEEEEEEEE
T ss_pred CeEEEEEEEC
Confidence 8899999884
No 187
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.29 E-value=8.3e-12 Score=111.77 Aligned_cols=91 Identities=24% Similarity=0.374 Sum_probs=77.4
Q ss_pred CeEEEEEEeCCCCCcccEEEee---ecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAK---IKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~g---g~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
..+.|.|.+. ..+|||++.+ +.+...+. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 4 ~~~~v~l~k~--~~glG~~l~~~~~~~~~~~~~-~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 4 ELFPVELEKD--SEGLGISIIGMGAGADMGLEK-LGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp EEEEEECCCC--SSCCCCEEEEEECCCCSSSCC-EEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred EEEEEEEEeC--CCCCCEEEEecCCCCcCCCCC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4567787774 3899999998 33322222 6899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCcc
Q psy1156 464 SSGPLNMDLLISRTSLK 480 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~ 480 (671)
+..+..+.|+|.|.+..
T Consensus 81 ~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 81 RNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHSCSSCEEEEEECCCC
T ss_pred hcCCCeEEEEEEeCCCC
Confidence 98889999999998764
No 188
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.29 E-value=2e-11 Score=108.29 Aligned_cols=95 Identities=22% Similarity=0.362 Sum_probs=79.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
+...+.|.|.+.....+|||++.++.+... +...|++|..|.+++||+++|.|++||+|++|||+.|.++++.+++.++
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345677888644456899999998754321 1126899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..+.|+|.|.+.
T Consensus 90 ~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 90 RNAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHHCSEEEEEEEECCC
T ss_pred HcCCCeEEEEEEeCCc
Confidence 8778899999998764
No 189
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.29 E-value=2.3e-11 Score=105.95 Aligned_cols=89 Identities=24% Similarity=0.257 Sum_probs=73.0
Q ss_pred CeEEEEEEeCCCCCcccEEEee-ecCCCC--CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAK-IKNSSE--GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~g-g~~~~~--g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
..++|+|.|.. .++|||+|.+ +..... ....+++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|
T Consensus 4 ~~r~v~l~k~~-~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 4 QRKVLTLEKGD-NQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CEEEEEEECCT-TCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred ccEEEEEEeCC-CCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 45889998853 6799999997 211000 001589999999999999999 999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeC
Q psy1156 464 SSGPLNMDLLISRT 477 (671)
Q Consensus 464 ~~~g~~V~L~V~R~ 477 (671)
+..+..+.|+|.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 97778999998763
No 190
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=1.2e-11 Score=110.38 Aligned_cols=86 Identities=38% Similarity=0.607 Sum_probs=75.7
Q ss_pred cceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 574 CTFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 574 ~~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
...+.|.|.+.. .+|||.|.++.+. .|++|..|.+++||+++|+|++||+|++|||++|.++++.+++.+++..
T Consensus 14 ~~~~~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~ 87 (113)
T 1um7_A 14 REPRKIILHKGS--TGLGFNIVGGEDG----EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRA 87 (113)
T ss_dssp CSEEEEEEECCS--SCSSBCCBCCSTT----CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSC
T ss_pred CceEEEEEEECC--CcccEEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 356789998875 7899999987652 4899999999999999999999999999999999999999999999876
Q ss_pred CCCcEEEEEEeCC
Q psy1156 654 KNGSISLHICRRL 666 (671)
Q Consensus 654 g~~~VtL~V~Rr~ 666 (671)
+ ..|.|+|.|+.
T Consensus 88 ~-~~v~l~v~r~~ 99 (113)
T 1um7_A 88 G-QSVTIVAQYRP 99 (113)
T ss_dssp C-SEEEEEEECCH
T ss_pred C-CcEEEEEEECc
Confidence 4 78999998864
No 191
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.28 E-value=1.6e-11 Score=104.91 Aligned_cols=83 Identities=31% Similarity=0.503 Sum_probs=68.9
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI- 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s- 653 (671)
+.++|+|.|.. .+|||.+.+..+. .|++|..| ++|||+ +| |++||+|++|||+++.++++.+++.+|+..
T Consensus 3 ~~~~v~l~k~~--~g~G~~~~~~~~~----~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 73 (88)
T 3bpu_A 3 ELITVHIVKGP--MGFGFTIADSPGG----GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESP 73 (88)
T ss_dssp EEEEEEEECBT--TBSSCEEEECTTS----SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred cEEEEEEEcCC--CceeEEEEecCCC----CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCC
Confidence 45788999986 7999999876442 48899887 999999 88 999999999999999999999999999863
Q ss_pred CCCcEEEEEEeCC
Q psy1156 654 KNGSISLHICRRL 666 (671)
Q Consensus 654 g~~~VtL~V~Rr~ 666 (671)
....|.|+|.|+.
T Consensus 74 ~g~~v~l~v~R~g 86 (88)
T 3bpu_A 74 KGSEVTLLVQRQT 86 (88)
T ss_dssp TTCEEEEEEEEEC
T ss_pred CCCEEEEEEEeCC
Confidence 3468999998864
No 192
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=5.7e-12 Score=111.26 Aligned_cols=87 Identities=21% Similarity=0.350 Sum_probs=75.7
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.+. ..+|||.+.++.+.. .+++|..|.+++||+++|+|++||+|++|||+.|.++++.+++.+|+..
T Consensus 9 ~~~~v~l~~~--~~g~G~~i~~g~~~~----~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 82 (103)
T 1uep_A 9 KELDVHLRRM--ESGFGFRILGGDEPG----QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHA 82 (103)
T ss_dssp EEECCEEESS--SSSCCEEECCCCSTT----SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHH
T ss_pred eEEEEEEEeC--CCccCEEEeeecCCC----CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4566778774 478999999876533 6899999999999999999999999999999999999999999999865
Q ss_pred --CCeEEEEEEeCCc
Q psy1156 467 --PLNMDLLISRTSL 479 (671)
Q Consensus 467 --g~~V~L~V~R~~~ 479 (671)
+..|.|+|.|...
T Consensus 83 ~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 83 ARNGQVNLTVRRKVL 97 (103)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred CCCCcEEEEEEeCCC
Confidence 7899999998654
No 193
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.28 E-value=5.1e-12 Score=112.92 Aligned_cols=93 Identities=24% Similarity=0.313 Sum_probs=78.8
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCC-----CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSE-----GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAK 460 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~-----g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av 460 (671)
..++.|.|.+. .+++|||+|.++.+... ....|++|..|.+++||+++|+|++||+|++|||+.|.++++.+++
T Consensus 8 ~~~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 86 (111)
T 1uju_A 8 PGLRELCIQKA-PGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAV 86 (111)
T ss_dssp CSSSCEEEECC-TTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHH
T ss_pred CccEEEEEEEC-CCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 35678898874 46899999998764210 1126899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeEEEEEEeCCc
Q psy1156 461 SIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 461 ~~L~~~g~~V~L~V~R~~~ 479 (671)
.+++..+..+.|+|.|...
T Consensus 87 ~~l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHHSSCSSEEEECCCCCCC
T ss_pred HHHHcCCCeEEEEEEECCC
Confidence 9999888899999988654
No 194
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.28 E-value=2.5e-11 Score=110.57 Aligned_cols=92 Identities=25% Similarity=0.320 Sum_probs=77.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCC-CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSP-RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~-~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.+.. ..+|||.|.++.... ....+++|..|.+++||+++|.|++||+|++|||++|.++++.+++.+|+..
T Consensus 15 ~~~~v~l~k~~-~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 93 (122)
T 1v5q_A 15 ETTEVVLTADP-VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 93 (122)
T ss_dssp EEEEEEECCCS-SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHH
T ss_pred eeEEEEEEeCC-CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 56678888875 489999999873221 1235799999999999999999999999999999999988999999999987
Q ss_pred C-CCcEEEEEEeCCC
Q psy1156 654 K-NGSISLHICRRLK 667 (671)
Q Consensus 654 g-~~~VtL~V~Rr~~ 667 (671)
. ...|.|+|.|+..
T Consensus 94 ~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 94 SITSKVTLEIEFDVA 108 (122)
T ss_dssp TTTTCEEEEEEEECC
T ss_pred CCCCeEEEEEEECCc
Confidence 4 4689999999765
No 195
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.28 E-value=1.2e-11 Score=104.72 Aligned_cols=82 Identities=20% Similarity=0.312 Sum_probs=71.3
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCC
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPL 468 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~ 468 (671)
+.|+|.. ..+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||+.+.++++.++...++..+.
T Consensus 3 ~~v~l~~---~~~~G~~l~gg~~~~----~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 74 (85)
T 1rgw_A 3 YSVTLTG---PGPWGFRLQGGKDFN----MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASY 74 (85)
T ss_dssp EEEEECC---SSCCCEEECCCGGGT----SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSS
T ss_pred EEEEEeC---CCccCEEEEeccCCC----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCC
Confidence 4677732 378999999876543 689999999999999999 99999999999999999999999999987778
Q ss_pred eEEEEEEeCC
Q psy1156 469 NMDLLISRTS 478 (671)
Q Consensus 469 ~V~L~V~R~~ 478 (671)
.+.|+|.|.+
T Consensus 75 ~v~l~v~R~~ 84 (85)
T 1rgw_A 75 NLSLTLQKSK 84 (85)
T ss_dssp CEEEEEESCC
T ss_pred eEEEEEEeCC
Confidence 8999998864
No 196
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=1.2e-11 Score=111.89 Aligned_cols=89 Identities=18% Similarity=0.309 Sum_probs=77.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhc--CCCCCCCEEEccCCeeccCCCHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKE--GCLELGDEIISVNGQRLRGLTMTQAKSI 462 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~ra--G~L~~GD~IlaVNG~~V~~~s~~~av~~ 462 (671)
....++|+|.|.. .++|||+|.++.+.. .|++|..|.++|||+++ | |++||+|++|||+.|.++++.+++.+
T Consensus 13 ~~~~~~v~l~k~~-~~~~G~~l~gg~~~~----~~v~V~~V~~~spA~~a~gG-L~~GD~Il~ing~~v~~~~~~~~~~~ 86 (119)
T 2cs5_A 13 HDNLVLIRMKPDE-NGRFGFNVKGGYDQK----MPVIVSRVAPGTPADLCVPR-LNEGDQVVLINGRDIAEHTHDQVVLF 86 (119)
T ss_dssp SSCCEEEEECCCS-SSCCSEEEEEEGGGT----EEEEEEEECSSSTTTSSSSC-CCTTCEEEEETTBCTTSSCHHHHHHH
T ss_pred CCCeEEEEEEeCC-CCCcCEEEecccCCC----CCeEEEEECCCCHHHHhhcC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4567899998854 568999999887543 68999999999999999 7 99999999999999999999999999
Q ss_pred HhcCC----CeEEEEEEeCCc
Q psy1156 463 ISSGP----LNMDLLISRTSL 479 (671)
Q Consensus 463 L~~~g----~~V~L~V~R~~~ 479 (671)
++..+ ..|.|+|.|...
T Consensus 87 ~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 87 IKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHHHHCCSSCEEEEEECCCC
T ss_pred HHhccccCCCEEEEEEEcccc
Confidence 98653 489999998754
No 197
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.27 E-value=9.7e-12 Score=109.67 Aligned_cols=85 Identities=31% Similarity=0.516 Sum_probs=73.4
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
...|.|. + ..+|||.|.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..+
T Consensus 6 ~~~v~l~-~--~~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g- 77 (103)
T 1wf7_A 6 SGSVSLV-G--PAPWGFRLQGGKDFN---MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACT- 77 (103)
T ss_dssp CEEEEEE-S--SSCCSCCEEEETTTT---EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCS-
T ss_pred EEEEEEe-C--CCccCEEEeccccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 4567776 3 378999999887643 579999999999999999 9999999999999999999999999998874
Q ss_pred CcEEEEEEeCCCC
Q psy1156 656 GSISLHICRRLKS 668 (671)
Q Consensus 656 ~~VtL~V~Rr~~~ 668 (671)
..|.|+|.|+...
T Consensus 78 ~~v~l~v~R~g~~ 90 (103)
T 1wf7_A 78 GSLNMTLQRASAA 90 (103)
T ss_dssp SEEEEEECCCSCC
T ss_pred CeEEEEEEeCCCc
Confidence 7899999887653
No 198
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.27 E-value=3.6e-11 Score=117.74 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=77.5
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCC--CCHHHHHHHHHh
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHD--LTHLEAISLFKT 652 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~--lSheEAV~lLK~ 652 (671)
....|.|.+.. .+|||+|.++.+...+ .|++|..|.++|+|+++|+|++||+|++|||++|.+ ++|.+++.+++.
T Consensus 18 ~~~~v~~~~~~--~~lG~~i~~g~~~~~~-~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~ 94 (206)
T 3r0h_A 18 KKILIELKVEK--KPMGVIVCGGKNNHVT-TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT 94 (206)
T ss_dssp SCEEEEEECTT--SCCCEEEECCSSSSCC-SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS
T ss_pred CEEEEEEEeCC--CCcCEEEecccCCCCC-CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh
Confidence 34578888864 8999999998876432 489999999999999999999999999999999999 999999999998
Q ss_pred cCCCc-EEEEEEeCCC
Q psy1156 653 IKNGS-ISLHICRRLK 667 (671)
Q Consensus 653 sg~~~-VtL~V~Rr~~ 667 (671)
.+ +. |.|+|.|..+
T Consensus 95 ~~-~~~v~l~v~R~~~ 109 (206)
T 3r0h_A 95 TY-EKAVTLTVFRADP 109 (206)
T ss_dssp CC-SSEEEEEEECCSS
T ss_pred cC-CCceEEEEEeccc
Confidence 76 55 9999998754
No 199
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.27 E-value=9.5e-12 Score=107.96 Aligned_cols=85 Identities=28% Similarity=0.459 Sum_probs=72.8
Q ss_pred eEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCc
Q psy1156 578 TIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGS 657 (671)
Q Consensus 578 ~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~ 657 (671)
.+.+.+.. ..+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+..+ ..
T Consensus 7 ~~~~~~~~-~~~lG~~l~~g~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~ 80 (94)
T 1vb7_A 7 GLTVDVAG-PAPWGFRISGGRDFH---TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SP 80 (94)
T ss_dssp CEEEEECS-SSCCSBCCEEETTTT---EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SS
T ss_pred EEEEEecC-CCCccEEEecccCCC---CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-Cc
Confidence 34454443 479999999876542 589999999999999999 9999999999999999999999999999876 88
Q ss_pred EEEEEEeCCCC
Q psy1156 658 ISLHICRRLKS 668 (671)
Q Consensus 658 VtL~V~Rr~~~ 668 (671)
|.|+|.|+...
T Consensus 81 v~l~v~R~g~~ 91 (94)
T 1vb7_A 81 LRLQLDRSSGP 91 (94)
T ss_dssp EEEEEECCCCC
T ss_pred EEEEEEECCcC
Confidence 99999998654
No 200
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.27 E-value=1.5e-11 Score=110.91 Aligned_cols=94 Identities=22% Similarity=0.326 Sum_probs=80.1
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC----C-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE----G-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQA 459 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~----g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~a 459 (671)
..+.++|.|.+. .+++|||+|.++.+... + ...|++|..|.++|||+++|+|++||+|++|||+.|.++++.++
T Consensus 13 ~~~~~~v~l~k~-~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 91 (117)
T 2ehr_A 13 WGPPRIVEIFRE-PNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEA 91 (117)
T ss_dssp BCCCEEEEECCC-SSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHH
T ss_pred CCCCEEEEEEeC-CCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 346689999885 46899999998865321 0 12689999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEeCCc
Q psy1156 460 KSIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 460 v~~L~~~g~~V~L~V~R~~~ 479 (671)
+.+++..+..+.|+|.|...
T Consensus 92 ~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 92 VEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHHHTSCSSEEEEECCBSC
T ss_pred HHHHHcCCCeEEEEEEECCC
Confidence 99999888999999987654
No 201
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=2.1e-11 Score=110.59 Aligned_cols=92 Identities=26% Similarity=0.349 Sum_probs=79.0
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCC-CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEG-NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g-~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...+.|+|.+.. .+|||+|.++.+.... ...|++|..|.+++||+++|.|++||+|++|||+.|.++++.+++.+++
T Consensus 16 ~~~~~v~l~r~~--~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 16 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEEECCS--SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred CceEEEEEEECC--CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356789998854 8999999987654210 1268999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..|.|+|.|...
T Consensus 94 ~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 94 NAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHCSEEEEEEEEEEE
T ss_pred cCCCeEEEEEEeCCc
Confidence 778899999998765
No 202
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.27 E-value=6.8e-12 Score=108.10 Aligned_cols=85 Identities=25% Similarity=0.359 Sum_probs=72.7
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..++|+|.|.. .+|||++.+.... .|++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+..
T Consensus 3 ~pr~v~l~k~~--~~~G~~l~~~~~~-----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 74 (91)
T 2vsp_A 3 KPKLCRLAKGE--NGYGFHLNAIRGL-----PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS 74 (91)
T ss_dssp CEEEEEEECBT--TBTSCCCBCCTTC-----SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS
T ss_pred CcEEEEEEeCC--CcccEEEEeccCC-----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 46889999865 5899999875433 689999999999999999 999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 75 g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 75 GKNVTLLVCGKKA 87 (91)
T ss_dssp CSEEEEEEEC---
T ss_pred CCEEEEEEEeCCc
Confidence 8899999998654
No 203
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.27 E-value=1.9e-11 Score=105.63 Aligned_cols=85 Identities=24% Similarity=0.393 Sum_probs=73.8
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|+|.+.. .+|||.+.++... .+++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+|+..
T Consensus 5 ~~r~v~l~~~~--~~~G~~l~~~~~~-----~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (95)
T 3r68_A 5 QPRVVVIKKGS--NGYGFYLRAGPEQ-----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG 76 (95)
T ss_dssp CCEEEEEECBT--TBCSCEEEEC--C-----CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CcEEEEEecCC--CcccEEEEecCCC-----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45789998854 8999999976543 589999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
++.+.+++.|...
T Consensus 77 ~~~~~~~~~r~~~ 89 (95)
T 3r68_A 77 GDQTTLLVLDKEL 89 (95)
T ss_dssp TTEEEEEEEECC-
T ss_pred CCeEEEEEECCcc
Confidence 8899999887654
No 204
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.27 E-value=1.5e-11 Score=109.26 Aligned_cols=88 Identities=32% Similarity=0.417 Sum_probs=74.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc-
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS- 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~- 465 (671)
..+.|.|.+. ..+|||+|.++.+... ..++|..|.+++||+++|+|++||+|++|||+++.+++|++++.+|+.
T Consensus 6 ~~~~v~l~k~--~~glG~~i~gg~~~~~---~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 6 SGTLVRVKKS--AATLGIAIEGGANTRQ---PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp SSEEEEEECC--SSSCCEEEECBTTSSC---SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred ceEEEEEEcC--CCcCCeEEECCCCCCC---CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 3567888664 4899999998876431 345999999999999999999999999999999999999999999985
Q ss_pred ----CCCeEEEEEEeCCc
Q psy1156 466 ----GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ----~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|...
T Consensus 81 ~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 81 FKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp HHCSSCSEEEEEECCCCC
T ss_pred cccCCCCeEEEEEEEccc
Confidence 57789999988654
No 205
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.27 E-value=2.8e-11 Score=107.05 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=75.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|+|.+. ..++|||.+.++.+.. .|++|..|.+++||+++| |++||+|++|||+.|.++++.+++.+|+.
T Consensus 15 ~~~~v~l~k~-~~~~lG~~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~- 87 (104)
T 1wi2_A 15 LPRIVTLKKP-PGAQLGFNIRGGKASQ----LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT- 87 (104)
T ss_dssp CCEEEEECCC-TTCCCSEEEECCSSSC----CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-
T ss_pred CCEEEEEEeC-CCCCccEEEEcccCCC----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-
Confidence 4588999885 4589999999876543 689999999999999999 99999999999999999999999999997
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|...
T Consensus 88 ~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 88 AREISMRVRFFSG 100 (104)
T ss_dssp SSSEEEEEECCCC
T ss_pred CCEEEEEEEECCC
Confidence 7889999988654
No 206
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.26 E-value=2.3e-11 Score=106.24 Aligned_cols=86 Identities=27% Similarity=0.342 Sum_probs=71.3
Q ss_pred eEEEeeCCCCCcccEEEecCCCCCC----CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 578 TIVFEKGPGKKGLGFTIVGGKDSPR----GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 578 ~V~L~K~~g~~~LGfsL~Gg~ds~~----g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
+|.|.+.. .+|||.+.++..... ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 5 ~v~l~~~~--~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (99)
T 3khf_A 5 PIVIHSSG--KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS 81 (99)
T ss_dssp CEEEEC-C--CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEeCC--CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 57777764 899999987643211 12377999999999999999 999999999999999999999999999976
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
+ ..|.|+|.|...
T Consensus 82 g-~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 G-NKISLRTTALEN 94 (99)
T ss_dssp C-SEEEEEEECSCS
T ss_pred C-CEEEEEEEECCC
Confidence 4 789999988654
No 207
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.26 E-value=2.3e-11 Score=107.38 Aligned_cols=83 Identities=22% Similarity=0.429 Sum_probs=73.5
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
++.|.|.|. .+++|||++....+ .|++|..|.++|||+++|+|++||+|++|||++|.++++.+++.+|+..+
T Consensus 13 ~~~v~l~K~-~~~~lG~~l~~~~~------~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~ 85 (97)
T 2ejy_A 13 VRLIQFEKV-TEEPMGICLKLNEK------QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETK 85 (97)
T ss_dssp CEEEEEEEC-SSSCCSEEEEECTT------CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCC
T ss_pred cEEEEEEeC-CCCCeeEEEEeCCC------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 478999885 46899999986432 68999999999999999999999999999999999999999999999778
Q ss_pred CeEEEEEEeC
Q psy1156 468 LNMDLLISRT 477 (671)
Q Consensus 468 ~~V~L~V~R~ 477 (671)
+.+.|+|.+.
T Consensus 86 ~~v~L~V~~~ 95 (97)
T 2ejy_A 86 GMISLKVIPN 95 (97)
T ss_dssp EEEEEEEECC
T ss_pred CeEEEEEEEC
Confidence 8899998753
No 208
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.26 E-value=2e-11 Score=107.56 Aligned_cols=91 Identities=27% Similarity=0.444 Sum_probs=78.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....+.|.|.+.. .+|||.|.++.+.. +. .+++|..|.+++||+++|.|++||+|++|||+.|.++++.+++.+++
T Consensus 9 ~~~~~~v~l~~~~--~g~G~~l~~~~~~~-~~-~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 84 (104)
T 2djt_A 9 ASGHFSVELVRGY--AGFGLTLGGGRDVA-GD-TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIR 84 (104)
T ss_dssp CCCCEEEEEECCS--SSCCEEEECCEETT-EE-CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHH
T ss_pred CCceEEEEEEeCC--CCccEEEEeccCCC-CC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4467889998754 79999999865431 11 68999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..+.|+|.|.+.
T Consensus 85 ~~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 85 AGGPQLHLVIRRPLS 99 (104)
T ss_dssp HTCSEEEEEECCCCC
T ss_pred cCCCeEEEEEEECCC
Confidence 778899999988765
No 209
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.26 E-value=2.9e-11 Score=111.32 Aligned_cols=89 Identities=22% Similarity=0.262 Sum_probs=77.8
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....+.|+|.+.. .+|||++.++.... .+++|..|.++|||+++|+|++||+|++|||+.|.++++.+++.+|+
T Consensus 16 ~g~~~~v~l~~~~--~g~G~~i~g~~~~~----~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~ 89 (129)
T 2kpk_A 16 KGKFIHTKLRKSS--RGFGFTVVGGDEPD----EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQ 89 (129)
T ss_dssp CSEEEEEEEEECS--SCCSEEEEEEEETT----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCcEEEEEEEECC--CcccEEEeCccCCC----CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4566788888854 79999999866432 67999999999999999999999999999999999999999999998
Q ss_pred cC--CCeEEEEEEeCCc
Q psy1156 465 SG--PLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~--g~~V~L~V~R~~~ 479 (671)
.. +..|.|+|.|...
T Consensus 90 ~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 90 SIPIGASVDLELCRGYP 106 (129)
T ss_dssp HSCTTEEEEEEEEECSC
T ss_pred hCCCCCeEEEEEEeCCC
Confidence 65 6789999999764
No 210
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.26 E-value=3.8e-11 Score=108.54 Aligned_cols=86 Identities=27% Similarity=0.483 Sum_probs=73.2
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. .++|||.+.++.+.. .|++|..|.++|||+++|+|++||+|++|||.+|.+.++.+++.+|+..+
T Consensus 24 ~~~~V~l~~~~-~~~lG~~l~~~~~~~---~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 99 (114)
T 2gzv_A 24 VPGKVTLQKDA-QNLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK 99 (114)
T ss_dssp CCEEEEEECCT-TSCCSEEEEECCC-----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEECC-CCcEeEEEEeCCCCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34688998886 467999999876532 47999999999999999999999999999999998889999999999875
Q ss_pred CCcEEEEEEeC
Q psy1156 655 NGSISLHICRR 665 (671)
Q Consensus 655 ~~~VtL~V~Rr 665 (671)
+.|.|+|.+.
T Consensus 100 -~~v~l~v~~~ 109 (114)
T 2gzv_A 100 -GEVTIHYNKL 109 (114)
T ss_dssp -SEEEEEEECC
T ss_pred -CeEEEEEEec
Confidence 6788888543
No 211
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.26 E-value=2.8e-11 Score=109.08 Aligned_cols=82 Identities=27% Similarity=0.371 Sum_probs=71.2
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.|.|++ .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||++|..+++.+++++|+..+.
T Consensus 24 ~r~v~l~k~~--~~~G~~l~~~-------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~ 93 (109)
T 2vsv_A 24 PRSIRFTAEE--GDLGFTLRGN-------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE 93 (109)
T ss_dssp CEEEEECCGG--GCCCEEEESS-------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CEEEEEEeCC--CceeEEEeCC-------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3578998875 8999999754 368999999999999999 99999999999999999999999999998764
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
..|.|+|.|...
T Consensus 94 ~~v~l~V~~~~~ 105 (109)
T 2vsv_A 94 DEIEMKVVSLLD 105 (109)
T ss_dssp SCEEEEEESCC-
T ss_pred CeEEEEEEECCC
Confidence 459999988753
No 212
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=3.4e-11 Score=103.79 Aligned_cols=82 Identities=23% Similarity=0.289 Sum_probs=72.3
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
.+++|+|.+.. .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++..
T Consensus 3 ~~r~v~l~~~~--~g~G~~l~~~--------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 71 (91)
T 2f5y_A 3 RYRQITIPRGK--DGFGFTICCD--------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC 71 (91)
T ss_dssp EEEEEEEECBT--TBTSEEEECS--------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEEeCC--CCccEEEecC--------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 35789998854 7899999752 579999999999999999 999999999999999999999999999877
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 72 ~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 72 PSEIILLVWRMVP 84 (91)
T ss_dssp SSEEEEEEEECC-
T ss_pred CCeEEEEEEeCCC
Confidence 7889999999764
No 213
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.26 E-value=2.7e-11 Score=109.47 Aligned_cols=93 Identities=24% Similarity=0.411 Sum_probs=77.3
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|.|.+. ...+|||.|.++.+.. . .|++|..|.+++||+++|+|++||+|++|||+.|.++++.+++.+++
T Consensus 13 ~~~~~~v~l~~~-~~~~lG~~i~g~~~~~--~-~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~ 88 (119)
T 1x6d_A 13 LDGIHVTILHKE-EGAGLGFSLAGGADLE--N-KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILR 88 (119)
T ss_dssp CTTEEEEEEECC-TTSCCSEEEECCSSSS--C-SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHH
T ss_pred CCCeEEEEEEeC-CCCccCEEEeCCCCCC--C-CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456788888774 4689999999876531 1 68999999999999999999999999999999999999999999998
Q ss_pred cCCC-eEEEEEEeCCccc
Q psy1156 465 SGPL-NMDLLISRTSLKK 481 (671)
Q Consensus 465 ~~g~-~V~L~V~R~~~~~ 481 (671)
..+. .+.|+|.|.+...
T Consensus 89 ~~~~~~~~l~v~R~~~~~ 106 (119)
T 1x6d_A 89 QAREPRQAVIVTRKLTPE 106 (119)
T ss_dssp HTTSSSEEEEEEECCCSS
T ss_pred hCCCCeEEEEEEcCCCcc
Confidence 6544 4568888876643
No 214
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.25 E-value=5.3e-11 Score=103.27 Aligned_cols=89 Identities=25% Similarity=0.417 Sum_probs=75.4
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCC--CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSE--GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~--g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
.+.+.+.+. .++|||+|.++.+... ....|++|..|.++|||+++| |++||+|++|||+.+.++.+.+++..++.
T Consensus 4 ~~~v~~~~~--~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 80 (97)
T 2w4f_A 4 ELTLTILRQ--TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRG 80 (97)
T ss_dssp EEEEEEECB--TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEEEeC--CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 356777775 4899999998765321 112789999999999999999 99999999999999999999888888877
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|.+.
T Consensus 81 ~g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 81 AGTAVQMRVWRERE 94 (97)
T ss_dssp SCSEEEEEEECCSS
T ss_pred CCCeEEEEEEeCCc
Confidence 88999999999765
No 215
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.25 E-value=6.4e-11 Score=105.66 Aligned_cols=86 Identities=26% Similarity=0.376 Sum_probs=74.3
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCC-CCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRL-KEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrL-r~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
..|.|.++. ..+|||.+.+..+. .|++|..|.++|||+++| | ++||+|++|||.++.++++.+++.+|+....
T Consensus 3 ~~v~l~~~~-~~glG~~~~~~~~~----~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 76 (112)
T 1qau_A 3 ISVRLFKRK-VGGLGFLVKERVSK----PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 76 (112)
T ss_dssp EEEEEECBT-TTBTSEEEEECSSS----SCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCS
T ss_pred EEEEEEcCC-CCceeEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 568887775 47899999876542 489999999999999999 6 9999999999999998899999999988655
Q ss_pred CcEEEEEEeCCCC
Q psy1156 656 GSISLHICRRLKS 668 (671)
Q Consensus 656 ~~VtL~V~Rr~~~ 668 (671)
..+.|.|.|+...
T Consensus 77 ~~v~l~v~R~g~~ 89 (112)
T 1qau_A 77 ETHVVLILRGPEG 89 (112)
T ss_dssp SSEEEEEEECCTT
T ss_pred CcEEEEEEeCCcc
Confidence 7899999998653
No 216
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.25 E-value=7.3e-11 Score=105.14 Aligned_cols=92 Identities=26% Similarity=0.387 Sum_probs=77.1
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.+.+.+. ..+|||++.++.....+. .|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.+++.
T Consensus 10 ~~~~~~~l~~~--~~glG~~~~~~~~~~~~~-~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 86 (111)
T 2koj_A 10 GKRLNIQLKKG--TEGLGFSITSRDVTIGGS-APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRS 86 (111)
T ss_dssp CEEEEEEEECB--TTBTCEEEEECSCSSSSS-SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CcEEEEEEEEC--CCccCEEEEeccCCCCCC-cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 34566777664 389999999876433233 689999999999999999999999999999999999999999999986
Q ss_pred C--CCeEEEEEEeCCcc
Q psy1156 466 G--PLNMDLLISRTSLK 480 (671)
Q Consensus 466 ~--g~~V~L~V~R~~~~ 480 (671)
. +..|.|+|.|.+..
T Consensus 87 ~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 87 TKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp CCCSSEEEEEEEECCCC
T ss_pred CCCCCeEEEEEEeCCCC
Confidence 4 78999999997753
No 217
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.24 E-value=1.6e-11 Score=112.88 Aligned_cols=90 Identities=28% Similarity=0.387 Sum_probs=74.3
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC--
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG-- 466 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~-- 466 (671)
+.|.|.+ ....+|||+|.++.+.......|++|..|.++|||+++|+|++||+|++|||+.|.+++|.+++.+|+..
T Consensus 27 ~~v~l~k-~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 27 LEIPLND-SGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEEECSS-STTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEEee-CCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 3455443 3468999999987643211115899999999999999999999999999999999999999999999865
Q ss_pred -----CCeEEEEEEeCCc
Q psy1156 467 -----PLNMDLLISRTSL 479 (671)
Q Consensus 467 -----g~~V~L~V~R~~~ 479 (671)
+..|.|+|.|...
T Consensus 106 ~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHTCEEEEEEEECSC
T ss_pred cccCCCCEEEEEEEeCCC
Confidence 7899999999764
No 218
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.24 E-value=2.4e-11 Score=107.46 Aligned_cols=86 Identities=21% Similarity=0.359 Sum_probs=76.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
+.+.|.|.+. ++..|||.+..+... .|++|..|.+||||+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 1 g~r~v~l~~~-~~~~~G~~l~~~~~~-----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 73 (106)
T 3ngh_A 1 GPRESKLSKQ-EGQNYGFFLRIEKDT-----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS 73 (106)
T ss_dssp CCEEEEEECC-TTCCCCCEEECCTTC-----CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHT
T ss_pred CCEEEEEEeC-CCCeeCEEEEEEeCC-----CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3578999885 468999999876543 689999999999999999 999999999999999999999999999888
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 74 g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 74 GNSVTLLVLDGDS 86 (106)
T ss_dssp TTEEEEEEECHHH
T ss_pred CCEEEEEEEECCe
Confidence 8999999998654
No 219
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.24 E-value=7.5e-12 Score=114.68 Aligned_cols=91 Identities=25% Similarity=0.400 Sum_probs=75.4
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCC-------------------------CCCcceeEEEeCCCCHHhHhCCCCCCCEE
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSP-------------------------RGAIGIFIKSILDNGQAAEDGRLKEGDEI 630 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~-------------------------~g~~GVfIssV~pgSpAaraGrLr~GDrI 630 (671)
.+.|+|.|.. .+|||.|.+..... ....|++|..|.++|||+++| |++||+|
T Consensus 9 ~r~v~l~r~~--~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 9 PKTVTLKRTS--QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp CCCEEEECCS--SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CEEEEEEECC--CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 3578999886 78999998621100 012579999999999999999 9999999
Q ss_pred EEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCCCCC
Q psy1156 631 LAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLKSKK 670 (671)
Q Consensus 631 LeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~~~~ 670 (671)
++|||++|.++++.+++.+|+.. ...|.|+|.|......
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~~~~ 124 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPKDSGPS 124 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCCCCCSC
T ss_pred EEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECCCCCC
Confidence 99999999999999999999987 4789999998876543
No 220
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.24 E-value=4.8e-11 Score=102.60 Aligned_cols=83 Identities=18% Similarity=0.297 Sum_probs=72.7
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCC
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPL 468 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~ 468 (671)
+.|.+.. ..+|||++.++.+.. .|++|..|.++|||+++| |++||+|++|||+.+.++.+.++..+++..+.
T Consensus 5 ~~v~~~~---~~~~G~~l~~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 76 (91)
T 2pkt_A 5 QQIDLQG---PGPWGFRLVGGKDFE----QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTD 76 (91)
T ss_dssp EEEEEES---SSCCSEEEEEEGGGT----EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred EEEEECC---CCCCCEEEEccCCCC----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4555543 379999999886543 689999999999999999 99999999999999999999999999998889
Q ss_pred eEEEEEEeCCc
Q psy1156 469 NMDLLISRTSL 479 (671)
Q Consensus 469 ~V~L~V~R~~~ 479 (671)
.+.|+|.|.+.
T Consensus 77 ~v~l~v~R~g~ 87 (91)
T 2pkt_A 77 NLTLTVARSEH 87 (91)
T ss_dssp EEEEEEEEECC
T ss_pred eEEEEEEECCc
Confidence 99999999765
No 221
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.24 E-value=5.2e-11 Score=105.44 Aligned_cols=91 Identities=23% Similarity=0.388 Sum_probs=75.6
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCC------CC--cCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSE------GN--IGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMT 457 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~------g~--~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~ 457 (671)
...+.|.|.|.. .+|||++.++.+... +. ..+++|..|.++|||+++| |++||+|++|||+.+.++++.
T Consensus 5 ~~~r~v~l~k~~--~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~ 81 (107)
T 3qe1_A 5 GSPRVVRIVKSE--SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHK 81 (107)
T ss_dssp -CCEEEEEECBT--TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHH
T ss_pred CCcEEEEEEECC--CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 356889998864 589999998743221 00 1456899999999999999 999999999999999999999
Q ss_pred HHHHHHhcCCCeEEEEEEeCCc
Q psy1156 458 QAKSIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 458 ~av~~L~~~g~~V~L~V~R~~~ 479 (671)
+++.+++..+..+.|+|.|...
T Consensus 82 ~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 82 QVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHHcCCCEEEEEEEcCCC
Confidence 9999999888999999998654
No 222
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.24 E-value=1.6e-11 Score=107.68 Aligned_cols=87 Identities=26% Similarity=0.523 Sum_probs=73.0
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
.++.|.|.+.....+|||.|.++.+.. .|++|..|.+++||+++| |++||+|++|||++|.++++.+++.+++..
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~- 82 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHG---VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS- 82 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTT---CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS-
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC-
Confidence 456788877555689999999876532 589999999999999999 999999999999999999998888777653
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+.+
T Consensus 83 -~~v~l~v~R~g~ 94 (101)
T 1uez_A 83 -KKLVLSVYSAGR 94 (101)
T ss_dssp -SSCCEEECCCCC
T ss_pred -CeEEEEEEECCc
Confidence 579999988754
No 223
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.24 E-value=2.4e-11 Score=106.77 Aligned_cols=87 Identities=22% Similarity=0.363 Sum_probs=76.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....++|+|.+.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++
T Consensus 4 ~~~~r~v~l~k~~--~g~G~~l~~~~~~-----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~ 75 (102)
T 2d90_A 4 GSSGRVVVIKKGS--NGYGFYLRAGPEQ-----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIR 75 (102)
T ss_dssp CSSSEEEEEECCS--SSSSCEEEECSSS-----SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCCCEEEEEeeCC--CCccEEEEeecCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3456889998854 7999999975432 689999999999999999 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..+.|+|.|.+.
T Consensus 76 ~~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 76 KGGDQTTLLVLDKEA 90 (102)
T ss_dssp HSTTEEEEEECSTTC
T ss_pred cCCCEEEEEEEECCC
Confidence 778899999988654
No 224
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.23 E-value=3.2e-11 Score=108.83 Aligned_cols=90 Identities=18% Similarity=0.310 Sum_probs=77.0
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCC---CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSE---GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~---g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
..+.|.|.+. ...+|||+|.++.+... +. .|++|..|.+++||+ +| |++||+|++|||+.|.++++.+++.++
T Consensus 14 ~~~~v~l~k~-~~~glG~~i~gg~~~~~~~~~~-~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 14 EQYTVTLQKD-SKRGFGIAVSGGRDNPHFENGE-TSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp EEEEEEEECC-SSSTTCEEEECCSSCCCCSSCC-CBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred eEEEEEEEEC-CCCccCEEEeCCcCCccccCCC-CCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 4577888874 36899999999875432 22 689999999999997 78 999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCcc
Q psy1156 464 SSGPLNMDLLISRTSLK 480 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~ 480 (671)
+..+..+.|+|.|....
T Consensus 90 ~~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 90 RKSGKIAAIVVKRPRKV 106 (117)
T ss_dssp HHSCSEEEEEEEEEEEC
T ss_pred hcCCCeEEEEEEECCcc
Confidence 98889999999996653
No 225
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.23 E-value=3.8e-11 Score=105.51 Aligned_cols=83 Identities=22% Similarity=0.336 Sum_probs=71.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
....+.+.+.. .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 15 ~~~~v~l~~~~--~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 84 (100)
T 1whd_A 15 EKLQITIRRGK--DGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCP 84 (100)
T ss_dssp EEEEEEEECCS--SSSSCBCCCS-------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCS
T ss_pred ceEEEEEECCC--CeeeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 44567777765 7899998764 378999999999999999 9999999999999999999999999999875
Q ss_pred CCcEEEEEEeCCCC
Q psy1156 655 NGSISLHICRRLKS 668 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~ 668 (671)
+.|.|+|.|....
T Consensus 85 -~~v~l~v~R~~~~ 97 (100)
T 1whd_A 85 -SEIILLVWRVSGP 97 (100)
T ss_dssp -SEEEEEEEECCSS
T ss_pred -CeEEEEEEECCCC
Confidence 6799999988654
No 226
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.23 E-value=3.1e-11 Score=107.68 Aligned_cols=86 Identities=29% Similarity=0.489 Sum_probs=75.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
.++.|.|.+. ..+|||.|.++.+ .|++|..|.+++||+++|+|++||+|++|||+.|.++++.+++.+++..
T Consensus 15 ~~~~v~l~~~--~~~lG~~l~~~~~------~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (111)
T 2dlu_A 15 HVEEVELIND--GSGLGFGIVGGKT------SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC 86 (111)
T ss_dssp EEEEEEEECC--SSCCCEEEECCSS------SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH
T ss_pred ceEEEEEEeC--CCccCEEEeccCC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4578888874 3789999997653 5899999999999999999999999999999999999999999999877
Q ss_pred CCeEEEEEEeCCcc
Q psy1156 467 PLNMDLLISRTSLK 480 (671)
Q Consensus 467 g~~V~L~V~R~~~~ 480 (671)
+..|.|+|.|.+..
T Consensus 87 g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 87 GNSVRMLVARDPAG 100 (111)
T ss_dssp CSEEEEEEEESCTT
T ss_pred CCeEEEEEEeCCCC
Confidence 88999999997653
No 227
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.23 E-value=6e-11 Score=104.45 Aligned_cols=91 Identities=24% Similarity=0.455 Sum_probs=75.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|+|.+.. +++|||+|.+.... . ...+++|..|.+++||+++|.|++||+|++|||+.+.+.++.+++.+|+
T Consensus 7 ~~~~~~v~l~k~~-g~~lG~~i~~~~~~-~-~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~ 83 (101)
T 2yt7_A 7 GDNCREVHLEKRR-GEGLGVALVESGWG-S-LLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVR 83 (101)
T ss_dssp TCCCEEEEEECCT-TCCCCEEEEECCCS-S-SSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHH
T ss_pred CCceEEEEEEeCC-CCccCEEEEeCCCC-C-CccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 5577899998754 57999999853211 0 1147999999999999996559999999999999999999999999998
Q ss_pred c--CCCeEEEEEEeCC
Q psy1156 465 S--GPLNMDLLISRTS 478 (671)
Q Consensus 465 ~--~g~~V~L~V~R~~ 478 (671)
. .+..|.|+|.|..
T Consensus 84 ~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 84 ETKSQTSVTLSIVHCP 99 (101)
T ss_dssp HTTTSSEEEEEECCCC
T ss_pred hCCCCCeEEEEEEeCC
Confidence 6 6789999998753
No 228
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.23 E-value=4e-11 Score=112.22 Aligned_cols=92 Identities=26% Similarity=0.378 Sum_probs=74.9
Q ss_pred ceeeEEEeeCC--CCCcccEEEecCCCCC---------CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCH
Q psy1156 575 TFHTIVFEKGP--GKKGLGFTIVGGKDSP---------RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTH 643 (671)
Q Consensus 575 ~~~~V~L~K~~--g~~~LGfsL~Gg~ds~---------~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSh 643 (671)
..+.|.|.+.. +..+|||.+.++.+.. ....|++|..|.++|||+++| |++||+|++|||++|.++++
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 101 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTH 101 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCCH
Confidence 45677776643 1247999998876532 124699999999999999999 99999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 644 LEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 644 eEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.+++.+|+..+...|.|+|.|+..
T Consensus 102 ~~~~~~l~~~~g~~v~l~v~R~g~ 125 (139)
T 2vz5_A 102 DQARKRLTKRSEEVVRLLVTRQSL 125 (139)
T ss_dssp HHHHHHHCCTTCSEEEEEEEECC-
T ss_pred HHHHHHHHhCCCCEEEEEEEECCE
Confidence 999999987544679999999865
No 229
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=9e-11 Score=104.53 Aligned_cols=92 Identities=26% Similarity=0.422 Sum_probs=77.7
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC--CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE--GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSI 462 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~--g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~ 462 (671)
....+.+.|.+. ..+|||+|.++.+... ....|++|..|.+++||+++| |++||+|++|||+.+.++.+.+++..
T Consensus 13 ~~~~~~~~l~~~--~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (110)
T 1x5q_A 13 EEEELTLTILRQ--TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEA 89 (110)
T ss_dssp CCEEEEEEEECS--SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CcceEEEEEecC--CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHH
Confidence 345567888775 4899999998765321 112789999999999999999 99999999999999999999999988
Q ss_pred HhcCCCeEEEEEEeCCc
Q psy1156 463 ISSGPLNMDLLISRTSL 479 (671)
Q Consensus 463 L~~~g~~V~L~V~R~~~ 479 (671)
++..+..|.|+|.|++.
T Consensus 90 ~~~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESG 106 (110)
T ss_dssp HHSCCSEEEEEEEECSS
T ss_pred hhCCCCeEEEEEEECCc
Confidence 88888999999999775
No 230
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.23 E-value=4.4e-11 Score=106.83 Aligned_cols=84 Identities=21% Similarity=0.370 Sum_probs=74.1
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|.|.+. ...+|||.+.+.. .|++|..|.+||||+++|+|++||+|++|||++|.++++.+++.+++..+
T Consensus 3 ~~~v~L~k~-~~~glG~~i~~~~-------~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 74 (106)
T 2la8_A 3 KFNVDLMKK-AGKELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN 74 (106)
T ss_dssp EEEEEECCB-SSSTTCCEEEECS-------SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCB
T ss_pred EEEEEEEeC-CCCccCEEEEeCC-------CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC
Confidence 467888764 4689999998722 68999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeCCc
Q psy1156 468 LNMDLLISRTSL 479 (671)
Q Consensus 468 ~~V~L~V~R~~~ 479 (671)
+.+.|+|.|...
T Consensus 75 ~~v~l~v~R~~~ 86 (106)
T 2la8_A 75 GKVSMEVTRPKP 86 (106)
T ss_dssp SCEEEEEEECCS
T ss_pred CeEEEEEEeCCC
Confidence 899999999654
No 231
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=5.5e-11 Score=106.82 Aligned_cols=94 Identities=24% Similarity=0.374 Sum_probs=78.6
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCC---cCcEEEEEEcCCChhhh-cCCCCCCCEEEccCCeeccCCCHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGN---IGGFVVAHIVSGGLAEK-EGCLELGDEIISVNGQRLRGLTMTQAK 460 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~---~~GI~Vs~V~pGspA~r-aG~L~~GD~IlaVNG~~V~~~s~~~av 460 (671)
....+.|.|.+.. ..+|||+|.++.+..... ..+++|..|.+++||++ +| |++||+|++|||+.+.++++.+++
T Consensus 8 ~~~~~~v~l~~~~-~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~ 85 (114)
T 1uew_A 8 SLQTSDVVIHRKE-NEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIV 85 (114)
T ss_dssp CCCCEEEEEECCT-TSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHH
T ss_pred cccceEEEEEECC-CCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 4466889998743 579999999876443211 12679999999999999 88 999999999999999999999999
Q ss_pred HHHhcCCCeEEEEEEeCCcc
Q psy1156 461 SIISSGPLNMDLLISRTSLK 480 (671)
Q Consensus 461 ~~L~~~g~~V~L~V~R~~~~ 480 (671)
.+|+..+..+.|+|.|.+..
T Consensus 86 ~~l~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 86 KLIKDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HHHHHTTTEEEEEECCCSCC
T ss_pred HHHHcCCCeEEEEEEeCCcC
Confidence 99998889999999987653
No 232
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.23 E-value=2.4e-11 Score=106.63 Aligned_cols=90 Identities=28% Similarity=0.378 Sum_probs=76.5
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+++.|.|.+.....+|||.+.++.+.. .|++|..|.+++||+++| |++||+|++|||+.+.++.+.+++..++
T Consensus 6 ~~~~~~v~l~~~~~~~~lG~~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 80 (101)
T 1uez_A 6 SGEVRLVSLRRAKAHEGLGFSIRGGSEHG----VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALK 80 (101)
T ss_dssp SCCCEEECCCCCCTTTCSSEEEEECTTTT----CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSS
T ss_pred CCccEEEEEEECCCCCcccEEEeCCCCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhc
Confidence 45778898887556789999999876543 689999999999999999 9999999999999999999988777776
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
. +..+.|+|.|.+..
T Consensus 81 ~-~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 81 G-SKKLVLSVYSAGRI 95 (101)
T ss_dssp S-SSSCCEEECCCCCC
T ss_pred C-CCeEEEEEEECCcc
Confidence 4 56789999887653
No 233
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.22 E-value=2.5e-11 Score=118.95 Aligned_cols=86 Identities=31% Similarity=0.539 Sum_probs=75.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||++.++.+.. .|++|..|.++|||+++| |++||+|++|||.+|.++++.+++.+|+. +
T Consensus 84 ~~~~v~l~k~~-~~~lG~~i~~~~~~~---~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~ 157 (192)
T 3k1r_A 84 KLKEVRLDRLH-PEGLGLSVRGGLEFG---CGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-E 157 (192)
T ss_dssp SCEEEEEETTS-TTCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-S
T ss_pred ceEEEEEEeCC-CCceeEEEEcccccC---CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-C
Confidence 45689999885 379999999875432 589999999999999999 99999999999999999999999999988 4
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..|.|+|.|..+
T Consensus 158 -~~v~l~v~r~g~ 169 (192)
T 3k1r_A 158 -KTVSIKVRHIGL 169 (192)
T ss_dssp -SEEEEEEEECCE
T ss_pred -CeEEEEEEECCc
Confidence 789999998753
No 234
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.22 E-value=7.8e-11 Score=104.88 Aligned_cols=89 Identities=21% Similarity=0.293 Sum_probs=74.7
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCC--------CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHH
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEG--------NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQA 459 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g--------~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~a 459 (671)
.+.|.|.+. ..++|||+|.++...... ...|++|..|.+++||+++| |++||+|++|||+.|.++++.++
T Consensus 8 ~~~v~l~~~-~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 8 EKTVLLQKK-DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEECC-TTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred cEEEEEEEC-CCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 467888864 368999999987653100 01389999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEeCC
Q psy1156 460 KSIISSGPLNMDLLISRTS 478 (671)
Q Consensus 460 v~~L~~~g~~V~L~V~R~~ 478 (671)
+.+++..+..+.|+|.|..
T Consensus 86 ~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEEEECC
Confidence 9999877889999998754
No 235
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.22 E-value=5.4e-11 Score=109.04 Aligned_cols=95 Identities=21% Similarity=0.371 Sum_probs=80.2
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
+...+.|.|.+. ...+|||++.++.+... +...|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.+|
T Consensus 13 ~~~~~~v~l~~~-~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 91 (129)
T 2dmz_A 13 LFETYNVELVRK-DGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL 91 (129)
T ss_dssp CEEEEEEEECCC-TTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred CCcEEEEEEEeC-CCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 445677888663 36899999998765332 1126899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCcc
Q psy1156 464 SSGPLNMDLLISRTSLK 480 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~ 480 (671)
+..+..|.|+|.|.+..
T Consensus 92 ~~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 92 RNAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHCCSSEEEEEEEESSS
T ss_pred HcCCCeEEEEEEeCCcc
Confidence 98888999999997653
No 236
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.22 E-value=7.1e-11 Score=103.54 Aligned_cols=89 Identities=27% Similarity=0.407 Sum_probs=76.1
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|+|.+.. .+.|||.+.+..... .|++|..|.+++||+++| |++||+|++|||+.+.++++.+++..++
T Consensus 8 ~~~~~~v~l~~~~-~~~lG~~~~~~~~~~----~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~ 81 (100)
T 2eeh_A 8 SDIIHSVRVEKSP-AGRLGFSVRGGSEHG----LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLT 81 (100)
T ss_dssp CCEECCEEECCCS-SSSCSEEEECCTTTT----CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CCeEEEEEEEECC-CCCccEEEEccccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc
Confidence 3456778888753 467999999865432 689999999999999999 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
. +..+.|+|.|.+..
T Consensus 82 ~-~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 82 S-SSRLHMMVRRMGSG 96 (100)
T ss_dssp S-CSSEEEEEEECSCC
T ss_pred C-CCEEEEEEEECCcC
Confidence 6 78999999998763
No 237
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.22 E-value=6e-11 Score=103.50 Aligned_cols=86 Identities=21% Similarity=0.360 Sum_probs=74.8
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
+-..+.|.|.+. ...+|||.+.+.. .|++|..|.++|||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 6 ~~~~~~v~l~~~-~~~glG~~~~~~~-------~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~ 77 (96)
T 2qkv_A 6 SLEKFNVDLMKK-AGKELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK 77 (96)
T ss_dssp CCCCEEEEEECB-TTBCCCEEEEECS-------SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred HCceEEEEEEeC-CCCCccEEEEeCC-------CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 345678888764 3578999988621 68999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCC
Q psy1156 465 SGPLNMDLLISRTS 478 (671)
Q Consensus 465 ~~g~~V~L~V~R~~ 478 (671)
..++.+.|+|.|..
T Consensus 78 ~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 78 GANGKVSMEVTRPK 91 (96)
T ss_dssp TCSSEEEEEEECCC
T ss_pred cCCCcEEEEEEeCC
Confidence 88889999998853
No 238
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.22 E-value=7.5e-11 Score=106.48 Aligned_cols=89 Identities=25% Similarity=0.386 Sum_probs=78.4
Q ss_pred CCCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 384 SQEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 384 ~~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
.....+.|.|.+.. .+|||++.++.+. .|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.++
T Consensus 11 ~~~~~~~v~l~k~~--~glG~~l~~~~~~-----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 83 (119)
T 1tp5_A 11 IPREPRRIVIHRGS--TGLGFNIVGGEDG-----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 83 (119)
T ss_dssp CCCSCEEEEEECTT--SCCCEEEEECGGG-----CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCccEEEEEEECC--CCccEEEecCCCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35577899998854 6799999987642 6899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..+.|+|.|...
T Consensus 84 ~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 84 KNAGQTVTIIAQYKPE 99 (119)
T ss_dssp HTSCSEEEEEEEECHH
T ss_pred HcCCCeEEEEEEECCc
Confidence 8888899999998654
No 239
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=9.5e-11 Score=102.55 Aligned_cols=83 Identities=36% Similarity=0.512 Sum_probs=70.3
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
+.+.|.|.+.. .+|||.|.+.. .|++|..|.++ |+++| |++||+|++|||++|.+++|.+++++|+..+
T Consensus 10 ~~~~v~l~~~~--~g~G~~i~~~~------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 10 ELMTLTIVKGA--QGFGFTIADSP------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp CCEEEEEECCS--SSSSEEEEEET------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEeCC--CceeEEEEcCC------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45678888876 89999997532 37999999983 67788 9999999999999999999999999999864
Q ss_pred -CCcEEEEEEeCCCC
Q psy1156 655 -NGSISLHICRRLKS 668 (671)
Q Consensus 655 -~~~VtL~V~Rr~~~ 668 (671)
...|.|+|.|....
T Consensus 79 ~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 79 IGSETSLIIHRGSGP 93 (96)
T ss_dssp TTSEEEEEEECCSSC
T ss_pred CCCEEEEEEEECCCC
Confidence 47899999997653
No 240
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2.6e-11 Score=105.01 Aligned_cols=85 Identities=27% Similarity=0.425 Sum_probs=73.8
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
+..++.|+|.|. ..++|||++.+.. .+++|..|.+++||+++|.|++||+|++|||+.+ +.++.++..+|+
T Consensus 4 ~~~~r~v~l~k~-~~~~lG~~i~~~~-------~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~ 74 (91)
T 2e7k_A 4 GSSGRMVGIRKT-AGEHLGVTFRVEG-------GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLR 74 (91)
T ss_dssp CCCSCBCCBCCC-TTCCCCEEEEESS-------SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHH
T ss_pred CCCcEEEEEEEC-CCCcEeEEEEecC-------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHH
Confidence 345678888774 4689999999732 6899999999999999888999999999999999 999999999999
Q ss_pred cCCCeEEEEEEeCC
Q psy1156 465 SGPLNMDLLISRTS 478 (671)
Q Consensus 465 ~~g~~V~L~V~R~~ 478 (671)
..+..+.|+|.|..
T Consensus 75 ~~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 75 NASGSVILKILSGP 88 (91)
T ss_dssp TCCSSBCEEEECCS
T ss_pred cCCCeEEEEEEECC
Confidence 87888999998743
No 241
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.21 E-value=4.8e-11 Score=108.97 Aligned_cols=85 Identities=26% Similarity=0.418 Sum_probs=72.9
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.+.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 9 ~~r~v~l~~~~--~g~G~~l~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (128)
T 2kjd_A 9 RPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (128)
T ss_dssp CCEEEEEECCS--SSCCEEEEECSSS----CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTC
T ss_pred CcEEEEEecCC--CcccEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34578888886 7899999887643 389999999999999999 9999999999999999889999999999875
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
...+.|+|.|+.
T Consensus 82 ~~~~~l~v~R~g 93 (128)
T 2kjd_A 82 DETKLLVVDRET 93 (128)
T ss_dssp SEEEEEEECHHH
T ss_pred CCEEEEEEEeCC
Confidence 445778887753
No 242
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2.3e-11 Score=106.95 Aligned_cols=86 Identities=28% Similarity=0.372 Sum_probs=71.1
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
...+.+.+.. ..+|||.+.++.+.. .|++|..|.++|||+++|.|++||+|++|||++|.++ +.+++.+++..+
T Consensus 10 ~~~~~v~~~~-~~~~G~~~~gg~~~~---~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~- 83 (100)
T 2edp_A 10 FQYVPVQLQG-GAPWGFTLKGGLEHC---EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSF- 83 (100)
T ss_dssp CEEEEEECCS-CSCCCCCEEEEGGGT---EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCC-
T ss_pred cEEEEEEECC-CCCcCEEEeccCCCC---CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCC-
Confidence 3455665543 368999999876543 4799999999999999933999999999999999886 899999999874
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+..
T Consensus 84 ~~v~l~v~R~~~ 95 (100)
T 2edp_A 84 RILKLIVRRRNS 95 (100)
T ss_dssp SSCEEEEEECCC
T ss_pred CeEEEEEEeCCC
Confidence 789999999764
No 243
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=6.2e-11 Score=106.82 Aligned_cols=86 Identities=23% Similarity=0.349 Sum_probs=73.6
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.+.+.. .+|||.+.++.+ .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+++..
T Consensus 19 ~~~~v~l~~~~--~~lG~~~~~~~~-----~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~- 89 (117)
T 1uit_A 19 EPRHVKVQKGS--EPLGISIVSGEK-----GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ- 89 (117)
T ss_dssp CCEEEEEECSS--CCCCEEEEECTT-----SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC-
T ss_pred CCEEEEEEeCC--CCccEEEEccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 44588888875 799999987754 389999999999999999 999999999999999999999988777655
Q ss_pred CCcEEEEEEeCCCCC
Q psy1156 655 NGSISLHICRRLKSK 669 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~ 669 (671)
...|.|+|.|+....
T Consensus 90 g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 90 CDTITILAQYNPHVH 104 (117)
T ss_dssp CSEEEEEECCCSCCC
T ss_pred CCeEEEEEEECCchh
Confidence 478999999876543
No 244
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.20 E-value=9.1e-11 Score=103.84 Aligned_cols=92 Identities=23% Similarity=0.287 Sum_probs=77.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCC---CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSE---GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKS 461 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~---g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~ 461 (671)
..+.+.|+|.|. +..+|||+|.++.+.+. +. .|++|..|.++|||+ +| |++||+|++|||+.+.++++..++.
T Consensus 5 ~~~~~~v~l~k~-~~~glG~~i~~~~~~~~~~~~~-~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 5 IWEQHTVTLHRA-PGFGFGIAISGGRDNPHFQSGE-TSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp CEEEEEEEEECB-TTTBTCEEEEECTTSCCTTTCC-CCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cceeEEEEEEeC-CCCccCEEEecCcCCCcccCCC-CCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHH
Confidence 345688999885 46899999998765321 12 689999999999999 88 9999999999999999999998888
Q ss_pred HHhcCCCeEEEEEEeCCcc
Q psy1156 462 IISSGPLNMDLLISRTSLK 480 (671)
Q Consensus 462 ~L~~~g~~V~L~V~R~~~~ 480 (671)
.+...+..+.|+|.|.+..
T Consensus 81 ~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 81 QLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HHHTCCSEEEEEEEEESCC
T ss_pred HhhCCCCEEEEEEEECCCC
Confidence 8887889999999987653
No 245
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=1e-10 Score=105.42 Aligned_cols=86 Identities=31% Similarity=0.480 Sum_probs=75.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
+++.|.|.+.. .+|||.+.++.+ .|++|..|.+++||+++| |++||+|++|||+.|.++++.+++..+...
T Consensus 19 ~~~~v~l~~~~--~~lG~~~~~~~~------~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 89 (117)
T 1uit_A 19 EPRHVKVQKGS--EPLGISIVSGEK------GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQ 89 (117)
T ss_dssp CCEEEEEECSS--CCCCEEEEECTT------SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSC
T ss_pred CCEEEEEEeCC--CCccEEEEccCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 34499998854 899999987653 689999999999999999 999999999999999999999888777778
Q ss_pred CCeEEEEEEeCCccc
Q psy1156 467 PLNMDLLISRTSLKK 481 (671)
Q Consensus 467 g~~V~L~V~R~~~~~ 481 (671)
+..+.|+|.|.+...
T Consensus 90 g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 90 CDTITILAQYNPHVH 104 (117)
T ss_dssp CSEEEEEECCCSCCC
T ss_pred CCeEEEEEEECCchh
Confidence 899999999977643
No 246
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=5e-11 Score=103.38 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=73.6
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|+|.+ ..+|||.+.++.+.. .+++|..|.+++||+++| |++||+|++|||+.+.++++.++..+++..
T Consensus 8 ~~~~v~l~~---~~~~G~~l~gg~~~~----~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 79 (94)
T 2eeg_A 8 MPHSVTLRG---PSPWGFRLVGGRDFS----APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGC 79 (94)
T ss_dssp CCEEEEECC---SSCCSCCEECCTTTT----SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTC
T ss_pred ceEEEEEeC---CCccCEEEECccCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 346777733 368999999887643 689999999999999999 999999999999999999999999999877
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 80 g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 80 HDHLTLSVSSGPS 92 (94)
T ss_dssp CSCEEEEEECCSS
T ss_pred CCeEEEEEEeCCC
Confidence 8889999998754
No 247
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=1.2e-10 Score=101.15 Aligned_cols=79 Identities=24% Similarity=0.450 Sum_probs=67.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
....+++.+.....+|||.+.+ | +|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 11 ~~~~~~i~~~~~~~~lG~~~~~---------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g 79 (90)
T 1y7n_A 11 NVTTVLIRRPDLRYQLGFSVQN---------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAV 79 (90)
T ss_dssp SCEEEEEEESSTTSCCCEEEET---------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CcceEEEEeCCCccccCeEecC---------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3456677676666889999853 3 899999999999999 9999999999999999999999999999874
Q ss_pred CCcEEEEEEeC
Q psy1156 655 NGSISLHICRR 665 (671)
Q Consensus 655 ~~~VtL~V~Rr 665 (671)
..|.|+|.+.
T Consensus 80 -~~v~l~v~p~ 89 (90)
T 1y7n_A 80 -GEIHMKTMPA 89 (90)
T ss_dssp -EEEEEEEECC
T ss_pred -CeEEEEEEEC
Confidence 7899998754
No 248
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.20 E-value=5.1e-11 Score=107.03 Aligned_cols=84 Identities=25% Similarity=0.362 Sum_probs=72.6
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.+.|.+.. ...|||.+..+.+. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 14 p~~~~l~~~~-~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g- 86 (114)
T 2edz_A 14 PRECKLSKQE-GQNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSG- 86 (114)
T ss_dssp CEEEEEECCT-TCCCSCEEECCTTC----CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTC-
T ss_pred CEEEEEeCCC-CCcccEEEEEecCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 3577777764 47899999876443 489999999999999999 9999999999999999999999999998864
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 87 ~~v~l~v~R~~ 97 (114)
T 2edz_A 87 NSVTLLVLDGD 97 (114)
T ss_dssp SEEEEEEECHH
T ss_pred CEEEEEEEECC
Confidence 78999998864
No 249
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.20 E-value=6.7e-11 Score=133.20 Aligned_cols=55 Identities=13% Similarity=0.135 Sum_probs=49.4
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEE
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHI 662 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V 662 (671)
.||+|..|.++++|+..| +++||+|++|||++|. +..+..++|++++.+.+.|.+
T Consensus 415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp CCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEE
T ss_pred eEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEE
Confidence 589999999999999999 9999999999999999 789999999998755566654
No 250
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=2.4e-11 Score=106.10 Aligned_cols=82 Identities=24% Similarity=0.415 Sum_probs=71.5
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..++|+|.+.....+|||.+.+. .|++|..|.++|||+ +| |++||+|++|||++|.++++.+++.+++..+
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~~-------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g 78 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISES-------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAE 78 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCSS-------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCS
T ss_pred ccEEEEEEECCCCCcccEEEecC-------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 34678898886545899999762 479999999999995 77 9999999999999999999999999999864
Q ss_pred CCcEEEEEEeCC
Q psy1156 655 NGSISLHICRRL 666 (671)
Q Consensus 655 ~~~VtL~V~Rr~ 666 (671)
..|.|+|.|..
T Consensus 79 -~~v~l~v~R~~ 89 (96)
T 2edv_A 79 -DSLSITVVRCT 89 (96)
T ss_dssp -SCEEEEEEECC
T ss_pred -CeEEEEEEECC
Confidence 78999999987
No 251
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.19 E-value=2.1e-11 Score=106.91 Aligned_cols=88 Identities=25% Similarity=0.374 Sum_probs=76.3
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.|.|.+.. .+|||.+.++.+.. .|++|..|.+++||+++|.|++||+|++|||+.+.++++.+++.+++.
T Consensus 10 ~~~~~v~l~~~~--~g~G~~~~~~~~~~----~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (103)
T 1wfv_A 10 FDYFTVDMEKGA--KGFGFSIRGGREYK----MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKS 83 (103)
T ss_dssp SCCEECCEECCT--TSSSBCCEEETTTT----EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ceEEEEEEecCC--CcCCEEEeccccCC----CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345677777643 67999999876543 589999999999999999999999999999999999999999999987
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|.+.
T Consensus 84 ~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 84 GGRRVRLLLKRGTG 97 (103)
T ss_dssp HCSEECEEEECTTC
T ss_pred CCCeEEEEEEECCC
Confidence 78899999998765
No 252
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.19 E-value=7.6e-11 Score=115.52 Aligned_cols=89 Identities=25% Similarity=0.451 Sum_probs=79.5
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|.|.+.. .++|||++.++.... .|++|..|.+||||+++| |++||+|++|||..|.++++.+++.+++
T Consensus 82 ~~~~~~v~l~k~~-~~~lG~~i~~~~~~~----~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~ 155 (192)
T 3k1r_A 82 SRKLKEVRLDRLH-PEGLGLSVRGGLEFG----CGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIR 155 (192)
T ss_dssp CSSCEEEEEETTS-TTCCCEEEEEEGGGT----EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHT
T ss_pred CCceEEEEEEeCC-CCceeEEEEcccccC----CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHc
Confidence 4567899998863 579999999886543 689999999999999999 9999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCcc
Q psy1156 465 SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~ 480 (671)
. +..|.|+|.|.+..
T Consensus 156 ~-~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 156 T-EKTVSIKVRHIGLI 170 (192)
T ss_dssp S-SSEEEEEEEECCEE
T ss_pred C-CCeEEEEEEECCcc
Confidence 7 89999999998763
No 253
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.19 E-value=5.8e-11 Score=106.59 Aligned_cols=90 Identities=23% Similarity=0.415 Sum_probs=77.4
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.+.. .+|||.+.++.+... .|++|..|.+++||+++|+|++||+|++|||+.|.++++.+++.+++..
T Consensus 17 ~~~~v~l~~~~--~glG~~l~~~~~~~~---~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 17 QEMIIEISKGR--SGLGLSIVGGKDTPL---NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp SCEEEEEECCS--SCCCCCCBCCTTSSC---SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred CEEEEEEEECC--CcccEEEeCCCCCCc---CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45788887754 899999997664321 4899999999999999999999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCccc
Q psy1156 467 PLNMDLLISRTSLKK 481 (671)
Q Consensus 467 g~~V~L~V~R~~~~~ 481 (671)
+..|.|+|.|.+...
T Consensus 92 ~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 92 PQKVRLVVYRDEAHY 106 (116)
T ss_dssp CSEEEEEEECCSSCC
T ss_pred CCeEEEEEEeCCccc
Confidence 789999999977643
No 254
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.19 E-value=5.6e-11 Score=104.79 Aligned_cols=88 Identities=18% Similarity=0.307 Sum_probs=76.2
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
.+.+.|.|.. ..+|||.|.++.+.. .+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+++.
T Consensus 4 g~~~~v~l~~---~~~~G~~l~gg~~~~----~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~ 75 (103)
T 1wf7_A 4 GSSGSVSLVG---PAPWGFRLQGGKDFN----MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKA 75 (103)
T ss_dssp CCCEEEEEES---SSCCSCCEEEETTTT----EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHH
T ss_pred CCEEEEEEeC---CCccCEEEeccccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3557788862 378999999987643 679999999999999999 99999999999999999999999999987
Q ss_pred CCCeEEEEEEeCCccc
Q psy1156 466 GPLNMDLLISRTSLKK 481 (671)
Q Consensus 466 ~g~~V~L~V~R~~~~~ 481 (671)
.+..+.|+|.|.+...
T Consensus 76 ~g~~v~l~v~R~g~~~ 91 (103)
T 1wf7_A 76 CTGSLNMTLQRASAAA 91 (103)
T ss_dssp CSSEEEEEECCCSCCC
T ss_pred CCCeEEEEEEeCCCcC
Confidence 7889999999877643
No 255
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.18 E-value=1.7e-10 Score=99.94 Aligned_cols=82 Identities=23% Similarity=0.306 Sum_probs=72.0
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...++|.|.+.. .+|||.+.+. .|++|..|.+++||+++| |++||+|++|||+.+.++.+.+++..++
T Consensus 7 ~~~r~v~l~~~~--~~~G~~l~~~--------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~- 74 (93)
T 2dls_A 7 GVQRCVIIQKDQ--HGFGFTVSGD--------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK- 74 (93)
T ss_dssp CCEEEEEEECSS--SSCCEEEECS--------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-
T ss_pred CCCEEEEEEeCC--CceeEEEeCC--------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-
Confidence 456789988754 7899999752 589999999999999999 9999999999999999999998888887
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|...
T Consensus 75 ~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 75 SGAYVALTLLGSSS 88 (93)
T ss_dssp SSSEEEEEEECCCC
T ss_pred CCCEEEEEEEECCC
Confidence 68999999999754
No 256
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=4.8e-11 Score=110.38 Aligned_cols=84 Identities=21% Similarity=0.368 Sum_probs=72.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.+.|.+.. .+|||.+.+.. .+++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..+
T Consensus 27 ~~~~~~l~k~~--~glG~~i~~~~------~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~ 98 (126)
T 1wif_A 27 KVIQTKLTVGN--LGLGLVVIQNG------PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNIT 98 (126)
T ss_dssp CEEEEEEECCT--TCCCCCEEEET------TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCC
T ss_pred ceEEEEEecCC--ceEeEEEEcCC------CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCC
Confidence 45677888775 89999998632 37899999999999999999999999999999999999999999999843
Q ss_pred -CCcEEEEEEeCC
Q psy1156 655 -NGSISLHICRRL 666 (671)
Q Consensus 655 -~~~VtL~V~Rr~ 666 (671)
...|.|+|.|+.
T Consensus 99 ~G~~v~l~V~R~~ 111 (126)
T 1wif_A 99 IGTVLQIKAYRGF 111 (126)
T ss_dssp SSCEEEEEEESSS
T ss_pred CCCEEEEEEEECC
Confidence 467999999974
No 257
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.18 E-value=3.7e-11 Score=104.20 Aligned_cols=85 Identities=24% Similarity=0.320 Sum_probs=73.6
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCC
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPL 468 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~ 468 (671)
..|++.+.. ..+|||++.++.+.. .|++|..|.+++||+++| |++||+|++|||+.+.++++.++..+++..+.
T Consensus 6 ~~~~~~~~~-~~~lG~~l~~g~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 79 (94)
T 1vb7_A 6 SGLTVDVAG-PAPWGFRISGGRDFH----TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSAS 79 (94)
T ss_dssp CCEEEEECS-SSCCSBCCEEETTTT----EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCS
T ss_pred EEEEEEecC-CCCccEEEecccCCC----CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345565543 479999999877543 689999999999999999 99999999999999999999999999997678
Q ss_pred eEEEEEEeCCc
Q psy1156 469 NMDLLISRTSL 479 (671)
Q Consensus 469 ~V~L~V~R~~~ 479 (671)
.+.|+|.|.+.
T Consensus 80 ~v~l~v~R~g~ 90 (94)
T 1vb7_A 80 PLRLQLDRSSG 90 (94)
T ss_dssp SEEEEEECCCC
T ss_pred cEEEEEEECCc
Confidence 99999999765
No 258
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.18 E-value=1.2e-10 Score=100.62 Aligned_cols=90 Identities=27% Similarity=0.391 Sum_probs=73.8
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|.|.+. ..+|||++.++.........|++|..|.+++||+++|.|++||+|++|||+.+.++++.++..+++..+
T Consensus 5 ~~~v~l~~~--~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 82 (97)
T 2iwn_A 5 TFDVELTKN--VQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTG 82 (97)
T ss_dssp EEEEEEECB--TTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred EEEEEEecC--CCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456777654 478999999864322111268999999999999999999999999999999999999999999988888
Q ss_pred CeEEEEEEeCCc
Q psy1156 468 LNMDLLISRTSL 479 (671)
Q Consensus 468 ~~V~L~V~R~~~ 479 (671)
..+.|+|.|.+.
T Consensus 83 ~~v~l~v~r~g~ 94 (97)
T 2iwn_A 83 QTVLLTLMRRGE 94 (97)
T ss_dssp SEEEEEEEEEEE
T ss_pred CeEEEEEEeCCC
Confidence 899999988653
No 259
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.18 E-value=2.4e-11 Score=102.74 Aligned_cols=80 Identities=20% Similarity=0.304 Sum_probs=71.1
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
.++.|+|.+.. .+|||.+.++ .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++..
T Consensus 2 ~~r~v~l~~~~--~g~G~~~~~~--------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 70 (83)
T 2kv8_A 2 RVRSVEVARGR--AGYGFTLSGQ--------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKC 70 (83)
T ss_dssp CEEEEEECCCS--SCCSCBCCCS--------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred CcEEEEEEeCC--CcccEEEEcC--------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45789998854 7899988752 579999999999999999 999999999999999999999999999877
Q ss_pred CCeEEEEEEeC
Q psy1156 467 PLNMDLLISRT 477 (671)
Q Consensus 467 g~~V~L~V~R~ 477 (671)
+..+.|+|.|.
T Consensus 71 ~~~v~l~v~R~ 81 (83)
T 2kv8_A 71 SGVLHMVIAEG 81 (83)
T ss_dssp SSCEEEEEECC
T ss_pred CCeEEEEEEcC
Confidence 78899999885
No 260
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=5.8e-11 Score=104.38 Aligned_cols=88 Identities=22% Similarity=0.292 Sum_probs=75.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhc-CCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKE-GCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~ra-G~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
..++..+.+.+.. ..+|||.+.++.+.. .+++|..|.+++||+++ | |++||+|++|||+.+.++ +.+++.++
T Consensus 7 ~~~~~~~~v~~~~-~~~~G~~~~gg~~~~----~~v~V~~V~~~spA~~agG-L~~GD~I~~ing~~v~~~-~~~~~~~~ 79 (100)
T 2edp_A 7 GGSFQYVPVQLQG-GAPWGFTLKGGLEHC----EPLTVSKIEDGGKAALSQK-MRTGDELVNINGTPLYGS-RQEALILI 79 (100)
T ss_dssp CCCCEEEEEECCS-CSCCCCCEEEEGGGT----EEEEECCCCTTSHHHHHTS-CCTTCEEEEETTEECCSC-SHHHHHHH
T ss_pred CCCcEEEEEEECC-CCCcCEEEeccCCCC----CCeEEEEECCCCHHHHcCC-CCCCCEEEEECCEEccch-HHHHHHHH
Confidence 4566777776643 379999999876543 67999999999999999 7 999999999999999987 88899999
Q ss_pred hcCCCeEEEEEEeCCc
Q psy1156 464 SSGPLNMDLLISRTSL 479 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~ 479 (671)
+..+..+.|+|.|.+.
T Consensus 80 ~~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 80 KGSFRILKLIVRRRNS 95 (100)
T ss_dssp HTCCSSCEEEEEECCC
T ss_pred HhCCCeEEEEEEeCCC
Confidence 8778899999999765
No 261
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=3.2e-11 Score=106.62 Aligned_cols=86 Identities=14% Similarity=0.288 Sum_probs=75.5
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.|+|.|. .++|||.+.+.... .|++|..|.++|||+++| |++||+|++|||+++..+++.++..+++.
T Consensus 7 ~~~r~v~l~k~--~~~~G~~l~~~~~~-----~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 78 (106)
T 2eei_A 7 GQPRLCYLVKE--GGSYGFSLKTVQGK-----KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKK 78 (106)
T ss_dssp SSSEEEEEECC--SSSCSCCEECCSSC-----CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCCCEEEEeccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35688999884 58999999865432 689999999999999999 99999999999999999999999999987
Q ss_pred CCCeEEEEEEeCCc
Q psy1156 466 GPLNMDLLISRTSL 479 (671)
Q Consensus 466 ~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|...
T Consensus 79 ~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 79 SGSRVMFLLVDKET 92 (106)
T ss_dssp HCSEEEEEECCTTT
T ss_pred CCCeEEEEEEcCch
Confidence 78899999988665
No 262
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.17 E-value=3e-11 Score=124.80 Aligned_cols=90 Identities=24% Similarity=0.258 Sum_probs=79.8
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhh-cCCCCCCCEEEccCCeeccCCCHHHHHHHH
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEK-EGCLELGDEIISVNGQRLRGLTMTQAKSII 463 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~r-aG~L~~GD~IlaVNG~~V~~~s~~~av~~L 463 (671)
...++.|+|.|. ..++|||+|.++.+.. .|++|..|.+||||++ +| |++||+|++|||++|.++++.+++.+|
T Consensus 75 ~~~~r~V~L~k~-~~~glGf~I~gg~d~~----~gi~V~~V~~gspA~~~aG-L~~GD~Il~VNG~~v~~~t~~e~v~~l 148 (263)
T 1z87_A 75 LLQRRRVTVRKA-DAGGLGISIKGGRENK----MPILISKIFKGLAADQTEA-LFVGDAILSVNGEDLSSATHDEAVQAL 148 (263)
T ss_dssp SCSSEEECCCTT-TTCCCCCEEEEETTTT----EEEEEEECCTTSHHHHCTT-CCSSCEEEEESSCBCTTSCHHHHHHHH
T ss_pred CCccEEEEEEeC-CCCCEeEEEeeccCCC----CCEEEEEECCCCHHHHhCC-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 346789999885 3589999999987654 6899999999999999 57 999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCcc
Q psy1156 464 SSGPLNMDLLISRTSLK 480 (671)
Q Consensus 464 ~~~g~~V~L~V~R~~~~ 480 (671)
+..+..|.|+|.|....
T Consensus 149 ~~~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 149 KKTGKEVVLEVKYMKEV 165 (263)
T ss_dssp HHCCSCCCEEEECCSSS
T ss_pred hcCCCeEEEEEEeCccc
Confidence 98888999999997654
No 263
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.17 E-value=8.9e-11 Score=100.33 Aligned_cols=83 Identities=25% Similarity=0.354 Sum_probs=69.1
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc-
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS- 465 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~- 465 (671)
+++.|+|.|.. .+|||++.+..+. .+++|..| +++||+ +| |++||+|++|||+.+.++++.+++.+++.
T Consensus 3 ~~~~v~l~k~~--~g~G~~~~~~~~~-----~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 72 (88)
T 3bpu_A 3 ELITVHIVKGP--MGFGFTIADSPGG-----GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVES 72 (88)
T ss_dssp EEEEEEEECBT--TBSSCEEEECTTS-----SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTS
T ss_pred cEEEEEEEcCC--CceeEEEEecCCC-----CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhC
Confidence 46789998854 8999999975432 68999887 999999 88 99999999999999999999999999974
Q ss_pred -CCCeEEEEEEeCCc
Q psy1156 466 -GPLNMDLLISRTSL 479 (671)
Q Consensus 466 -~g~~V~L~V~R~~~ 479 (671)
.+..+.|+|.|.+.
T Consensus 73 ~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 73 PKGSEVTLLVQRQTR 87 (88)
T ss_dssp CTTCEEEEEEEEECC
T ss_pred CCCCEEEEEEEeCCc
Confidence 57889999988653
No 264
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.17 E-value=9.3e-11 Score=103.53 Aligned_cols=83 Identities=20% Similarity=0.322 Sum_probs=69.3
Q ss_pred eeEEEeeCCCCCcccEEEecCCCC----CCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDS----PRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds----~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
+.|.|.+.. .++|||.|.+.... .....|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+.
T Consensus 17 ~~v~l~~~~-~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 17 KLVTVEKQD-NETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CEEEEECCT-TSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEeCC-CCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 467788875 36899999984221 1123589999999999999999 99999999999999999999999999999
Q ss_pred cCCCcEEEEE
Q psy1156 653 IKNGSISLHI 662 (671)
Q Consensus 653 sg~~~VtL~V 662 (671)
.+ +.|.|+|
T Consensus 95 ~~-~~v~l~v 103 (104)
T 2z17_A 95 SG-NLLTIET 103 (104)
T ss_dssp TT-TEEEEEC
T ss_pred CC-CcEEEEE
Confidence 85 5888876
No 265
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.17 E-value=1.6e-10 Score=105.54 Aligned_cols=92 Identities=33% Similarity=0.475 Sum_probs=74.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
....+.+.+.....+|||.+....... ...|++|..|.++|||+++|+|++||+|++|||++|. ++.++..+|+..+
T Consensus 19 ~~~~~~~~~~~~~~~lG~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~ 95 (124)
T 1wh1_A 19 ELEEVDLYRMNSQDKLGLTVCYRTDDE-DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEE 95 (124)
T ss_dssp EECCBCCCCSSTTCCCCEEEECCCCCS-SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSS
T ss_pred eEEEEEEEecCCCCcccEEEEecCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCC
Confidence 445566666654468999998765432 1258999999999999999999999999999999998 6899999998864
Q ss_pred CCcEEEEEEeCCCCC
Q psy1156 655 NGSISLHICRRLKSK 669 (671)
Q Consensus 655 ~~~VtL~V~Rr~~~~ 669 (671)
...|.|+|.|+....
T Consensus 96 g~~v~l~v~R~g~~~ 110 (124)
T 1wh1_A 96 NKNFSLLIARPELQL 110 (124)
T ss_dssp CCSCCEEEEECSSCC
T ss_pred CCEEEEEEEECCEEe
Confidence 568999999987643
No 266
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.17 E-value=1.7e-10 Score=99.98 Aligned_cols=85 Identities=29% Similarity=0.363 Sum_probs=70.5
Q ss_pred EEEEEEeCCCCCcccEEEeeecCC---CC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNS---SE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~---~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
++|++.+. .+|||+|.++.+. +. ....|++|..|.++|||++ | |++||+|++|||+.+.++++.+++..++
T Consensus 5 ~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 5 IRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEECS---SSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEECCC---CCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 45666553 4899999987641 11 0126899999999999999 8 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCC
Q psy1156 465 SGPLNMDLLISRTS 478 (671)
Q Consensus 465 ~~g~~V~L~V~R~~ 478 (671)
..+..+.|+|.|..
T Consensus 80 ~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 80 TFQNTVELIIVREV 93 (95)
T ss_dssp HCCSEEEEEEEEEC
T ss_pred cCCCeEEEEEEeCC
Confidence 88899999998853
No 267
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.16 E-value=2.4e-10 Score=104.04 Aligned_cols=89 Identities=27% Similarity=0.409 Sum_probs=74.1
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.+.+. ..+|||.|.++.....+. .|++|..|.++|||+++|.|++||+|++|||+.+.++++.+++.+++..
T Consensus 30 ~~~~v~l~~~--~~~lG~~l~~~~~~~~g~-~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 30 KRLNIQLKKG--TEGLGFSITSRDVTIGGS-APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp EEEEEEEECC--TTCCCEEEECCCCSSSSS-CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred eEEEEEEEcC--CCcEeEEEEeccCCcCCC-CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 3455666653 478999999876433233 6899999999999999999999999999999999999999999999853
Q ss_pred --CCeEEEEEEeCC
Q psy1156 467 --PLNMDLLISRTS 478 (671)
Q Consensus 467 --g~~V~L~V~R~~ 478 (671)
+..|.|+|.|.+
T Consensus 107 ~~g~~v~l~v~R~g 120 (121)
T 2kom_A 107 KMEGTVSLLVFRQE 120 (121)
T ss_dssp CSSCEEEEEEEECC
T ss_pred CCCCEEEEEEEeCC
Confidence 788999998864
No 268
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.16 E-value=1.1e-10 Score=101.80 Aligned_cols=87 Identities=18% Similarity=0.271 Sum_probs=71.9
Q ss_pred EEEEEeCCCCCcccEEEeeecCCCCC-C--cCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 390 MVRVNRRDFNEELGIYIAKIKNSSEG-N--IGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 390 ~V~L~k~~~~~~LGfsI~gg~~~~~g-~--~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
+|.|.+. ..+|||++.++...... . ..|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+++..
T Consensus 5 ~v~l~~~--~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (99)
T 3khf_A 5 PIVIHSS--GKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKS 81 (99)
T ss_dssp CEEEEC---CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CEEEEeC--CCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4666664 58999999876532110 0 1367999999999999999 999999999999999999999999999988
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 82 g~~v~l~v~r~~~ 94 (99)
T 3khf_A 82 GNKISLRTTALEN 94 (99)
T ss_dssp CSEEEEEEECSCS
T ss_pred CCEEEEEEEECCC
Confidence 9999999998765
No 269
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.15 E-value=1.3e-10 Score=106.51 Aligned_cols=73 Identities=29% Similarity=0.604 Sum_probs=64.9
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh-cCCCcEEEEEEeCC
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT-IKNGSISLHICRRL 666 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~-sg~~~VtL~V~Rr~ 666 (671)
.+|||.+.++.+ .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+. .....|.|+|.|+.
T Consensus 39 ~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 39 DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp SCCCEEEEECTT-----SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CceeEEEecCCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 789999987654 489999999999999999 99999999999999999999999998885 33467999998874
No 270
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.15 E-value=1.8e-10 Score=104.77 Aligned_cols=83 Identities=23% Similarity=0.220 Sum_probs=71.4
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+++.|+|.|.. .+|||+|.++. .|.+|..|.+ +|..+| |++||+|++|||++|.+++|.+++.+|+
T Consensus 10 ~~~~~~V~L~Kg~--~G~GFsI~~~~-------~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk 77 (113)
T 3soe_A 10 AGLLVTIPLIKGP--KGFGFAIADSP-------TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLK 77 (113)
T ss_dssp HCEEEEEEEECBT--TBSSEEEEEET-------TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred CCCEEEEEEEECC--CcccEEEeCCC-------CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3467899999964 79999997653 5778999988 467777 9999999999999999999999999999
Q ss_pred cC--CCeEEEEEEeCCc
Q psy1156 465 SG--PLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~--g~~V~L~V~R~~~ 479 (671)
.. +..|.|+|.|.+.
T Consensus 78 ~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 78 QFPVGADVPLLILRGGP 94 (113)
T ss_dssp HSCTTCEEEEEEEESSC
T ss_pred cCCCCCEEEEEEEECCc
Confidence 64 6799999999875
No 271
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.15 E-value=1.8e-10 Score=112.59 Aligned_cols=92 Identities=25% Similarity=0.322 Sum_probs=79.4
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCC-CCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPR-GAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~-g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
+..+|.|.++. ..+|||.+.++.+... +..|++|..|.++|||+++|+|++||+|++|||++|.++++.++..+|+..
T Consensus 6 ~~~~v~l~~~~-~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 6 ETTEVVLTADP-VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp EEEEEEEECBT-TTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred EEEEEEEEeCC-CCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45688998886 4899999999865432 346899999999999999999999999999999999999999999999987
Q ss_pred C-CCcEEEEEEeCCC
Q psy1156 654 K-NGSISLHICRRLK 667 (671)
Q Consensus 654 g-~~~VtL~V~Rr~~ 667 (671)
+ ...|.|.|.|..+
T Consensus 85 ~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 85 SITSKVTLEIEFDVA 99 (196)
T ss_dssp CSSSEEEEEEEECSC
T ss_pred CCCCeEEEEEEecCC
Confidence 4 4679999998774
No 272
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=8e-11 Score=106.83 Aligned_cols=88 Identities=25% Similarity=0.408 Sum_probs=73.2
Q ss_pred ceeeEEEeeCCCC-CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGK-KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~-~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.+.... .+|||+|.+.... +..|++|..|.++|||+++| |++||+|++|||++|..+++.+++.+|+.
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 90 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 90 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEET--TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS-
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcC--CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC-
Confidence 4578899888632 2799999874322 22489999999999999999 99999999999999999899999999975
Q ss_pred CCCcEEEEEEeCCCC
Q psy1156 654 KNGSISLHICRRLKS 668 (671)
Q Consensus 654 g~~~VtL~V~Rr~~~ 668 (671)
..+.|+|.|....
T Consensus 91 --~~v~l~v~R~p~~ 103 (114)
T 2d8i_A 91 --PSLGLLVRTYPEL 103 (114)
T ss_dssp --SEEEEEEEECCCS
T ss_pred --CcEEEEEEECCCC
Confidence 3799999997754
No 273
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.14 E-value=2.6e-10 Score=111.61 Aligned_cols=88 Identities=28% Similarity=0.345 Sum_probs=75.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ..+|||+|.++.+.. .|++|..|.++|||+++|.|++||+|++|||++|.+++|.+++.+++..+
T Consensus 7 ~~~~v~l~~~~-~~~lG~~i~~~~~~~---~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 82 (200)
T 2qt5_A 7 GSTVVELMKKE-GTTLGLTVSGGIDKD---GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVG 82 (200)
T ss_dssp EEEEEEEECCT-TCCCCEEEECCTTSS---SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCC
T ss_pred CCEEEEEEeCC-CCCCCEEEecccCCC---CCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34578887765 489999999887653 57899999999999999339999999999999999999999999998875
Q ss_pred CCcEEEEEEeCCC
Q psy1156 655 NGSISLHICRRLK 667 (671)
Q Consensus 655 ~~~VtL~V~Rr~~ 667 (671)
..|.|+|.|+.+
T Consensus 83 -~~v~l~v~R~~~ 94 (200)
T 2qt5_A 83 -ERVVLEVEYELP 94 (200)
T ss_dssp -SEEEEEEEEECC
T ss_pred -CeEEEEEeccCC
Confidence 689999998654
No 274
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=2.6e-10 Score=100.09 Aligned_cols=92 Identities=24% Similarity=0.328 Sum_probs=73.4
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCC-----CcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHH
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEG-----NIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKS 461 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g-----~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~ 461 (671)
..++|.|.+. ....|||.+.++...... ...|++|..|.++|||+++|.|++||+|++|||+.+.++++.++..
T Consensus 4 dp~~v~l~~~-~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 4 QPRRVELWRE-PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp SCEEEEECCC-C-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEEeC-CCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3478888774 357899999875532110 1158999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeCCc
Q psy1156 462 IISSGPLNMDLLISRTSL 479 (671)
Q Consensus 462 ~L~~~g~~V~L~V~R~~~ 479 (671)
+|+..++.+.|+|.|...
T Consensus 83 ~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTCCSSEEEEEECCCC
T ss_pred HHHhCCCcEEEEEEECCC
Confidence 999777799999988654
No 275
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.14 E-value=3.2e-10 Score=97.22 Aligned_cols=81 Identities=28% Similarity=0.517 Sum_probs=68.0
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
..|.+.+......|||.+. .|++|..|.++|+|+++|+|++||+|++|||+++.++++.++..+|+..+ +
T Consensus 4 ~~v~~~~~~~~~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~ 73 (92)
T 3cyy_A 4 TKVTLVKSAKNEEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-G 73 (92)
T ss_dssp EEEEEECSSTTSCCCEEEE---------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-T
T ss_pred EEEEEEeCCCCCCCCEEEe---------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-C
Confidence 3566666554568999886 27999999999999999999999999999999999999999999999875 6
Q ss_pred cEEEEEEeCCC
Q psy1156 657 SISLHICRRLK 667 (671)
Q Consensus 657 ~VtL~V~Rr~~ 667 (671)
.+.|+|.|+..
T Consensus 74 ~v~l~v~r~g~ 84 (92)
T 3cyy_A 74 KLKMVVQRDER 84 (92)
T ss_dssp EEEEEEEC---
T ss_pred cEEEEEEeCCc
Confidence 89999988764
No 276
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.14 E-value=4.8e-11 Score=107.57 Aligned_cols=82 Identities=29% Similarity=0.424 Sum_probs=70.7
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
+.|.|.++. .+|||.+.+. .|++|..|.+++||+++| |++||+|++|||++|.++++.+++.+|+..+..
T Consensus 17 r~v~l~~~~--~~~G~~l~~~-------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~ 86 (111)
T 1vae_A 17 RGIHFTVEE--GDLGFTLRGN-------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGE 86 (111)
T ss_dssp CCCCEECCS--SCCSCCEESS-------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTS
T ss_pred eEEEEEcCC--CcccEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 467787764 8899999754 368999999999999999 999999999999999999999999999987645
Q ss_pred cEEEEEEeCCCC
Q psy1156 657 SISLHICRRLKS 668 (671)
Q Consensus 657 ~VtL~V~Rr~~~ 668 (671)
.|.|+|.|....
T Consensus 87 ~v~l~V~~~~~~ 98 (111)
T 1vae_A 87 EVEMKVVSLLDS 98 (111)
T ss_dssp EECEEEECEECC
T ss_pred eEEEEEEecCCC
Confidence 699999886644
No 277
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.14 E-value=1.6e-10 Score=101.77 Aligned_cols=88 Identities=28% Similarity=0.357 Sum_probs=73.3
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCC---CC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNS---SE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKS 461 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~---~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~ 461 (671)
...+.|++.+. .+|||+|.++.+. +. ....|++|..|.++|||++ | |++||+|++|||+.+.++++.+++.
T Consensus 10 ~~~~~v~l~~~---~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~ 84 (103)
T 1n7t_A 10 KQEIRVRVEKD---PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVS 84 (103)
T ss_dssp CCCEEEEEECS---SCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHH
T ss_pred cEEEEEEEccC---CCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 45567888763 4899999987531 11 0126899999999999999 8 9999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeCC
Q psy1156 462 IISSGPLNMDLLISRTS 478 (671)
Q Consensus 462 ~L~~~g~~V~L~V~R~~ 478 (671)
.++..+..+.|+|.|..
T Consensus 85 ~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 85 LLKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHHCCSEEEEEEECCC
T ss_pred HhhcCCCeEEEEEEecC
Confidence 99988899999998864
No 278
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.14 E-value=8.4e-11 Score=104.79 Aligned_cols=88 Identities=26% Similarity=0.390 Sum_probs=78.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|+|.+.. .+|||++.++.+. .+++|..|.+++||+++|+|++||+|++|||+.+.++++.+++.+++
T Consensus 13 ~~~~~~v~l~k~~--~glG~~l~~~~~~-----~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~ 85 (113)
T 1um7_A 13 AREPRKIILHKGS--TGLGFNIVGGEDG-----EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK 85 (113)
T ss_dssp CCSEEEEEEECCS--SCSSBCCBCCSTT-----CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH
T ss_pred CCceEEEEEEECC--CcccEEEEeccCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4578899998854 7899999976542 68999999999999999999999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..+.|+|.|...
T Consensus 86 ~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 86 RAGQSVTIVAQYRPE 100 (113)
T ss_dssp SCCSEEEEEEECCHH
T ss_pred hCCCcEEEEEEECcc
Confidence 888899999988654
No 279
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.14 E-value=3.2e-10 Score=102.41 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=73.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.+.. .++|||.+.++.+.. .+++|..|.++|||+++|.|++||+|++|||+.+.+.++.++..+++..
T Consensus 24 ~~~~V~l~~~~-~~~lG~~l~~~~~~~----~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 98 (114)
T 2gzv_A 24 VPGKVTLQKDA-QNLIGISIGGGAQYC----PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 98 (114)
T ss_dssp CCEEEEEECCT-TSCCSEEEEECCC------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCEEEEEEECC-CCcEeEEEEeCCCCC----CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 56789998853 577999999876432 5899999999999999999999999999999999999999999999877
Q ss_pred CCeEEEEEEeC
Q psy1156 467 PLNMDLLISRT 477 (671)
Q Consensus 467 g~~V~L~V~R~ 477 (671)
++.+.|+|.+.
T Consensus 99 ~~~v~l~v~~~ 109 (114)
T 2gzv_A 99 KGEVTIHYNKL 109 (114)
T ss_dssp CSEEEEEEECC
T ss_pred CCeEEEEEEec
Confidence 77888988653
No 280
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.13 E-value=1.8e-10 Score=112.05 Aligned_cols=75 Identities=36% Similarity=0.616 Sum_probs=66.7
Q ss_pred CcccEEEecCCCC---C--CCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEE
Q psy1156 588 KGLGFTIVGGKDS---P--RGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHI 662 (671)
Q Consensus 588 ~~LGfsL~Gg~ds---~--~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V 662 (671)
.+|||+|.|+.+. + ....|++|..|.++|||++ | |++||+|++|||++|.+++|.+++.+++..+ +.|.|+|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v 78 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELII 78 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEE
Confidence 5799999998753 1 2356999999999999999 8 9999999999999999999999999999986 6999999
Q ss_pred EeC
Q psy1156 663 CRR 665 (671)
Q Consensus 663 ~Rr 665 (671)
.|+
T Consensus 79 ~r~ 81 (195)
T 2qbw_A 79 VRE 81 (195)
T ss_dssp EEE
T ss_pred EEc
Confidence 993
No 281
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.13 E-value=3.2e-10 Score=99.86 Aligned_cols=84 Identities=27% Similarity=0.466 Sum_probs=67.6
Q ss_pred ceeeEEEeeCCC-CCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPG-KKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g-~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.|... ..+|||+|.+.... +..|++|..|.++|||+++| |++||+|++|||++|.++++.++..++++
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~- 81 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ- 81 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSS--SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS-
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCC--CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-
Confidence 456788998863 24799999874321 23589999999999999999 99999999999999999999999999985
Q ss_pred CCCcEEEEEEe
Q psy1156 654 KNGSISLHICR 664 (671)
Q Consensus 654 g~~~VtL~V~R 664 (671)
..++|+|..
T Consensus 82 --~~l~ltV~~ 90 (94)
T 3kzd_A 82 --PSLGLLVRT 90 (94)
T ss_dssp --SEEEEEEEE
T ss_pred --CeEEEEEEe
Confidence 468888854
No 282
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.12 E-value=2.1e-10 Score=104.11 Aligned_cols=88 Identities=24% Similarity=0.427 Sum_probs=73.1
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
..++.+.+.+. ++|||+|.++.+... ..++|..|.+||||+++|.|++||+|++|||+.+.+++|.+++.+|+.
T Consensus 17 ~~~~~~~~~~~---~glG~~i~gg~~~~~---~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (118)
T 1v6b_A 17 KDVRLLRIKKE---GSLDLALEGGVDSPV---GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQK 90 (118)
T ss_dssp CCEEEEEEESC---SCCCCEEEEBTTSSS---CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHH
T ss_pred ceEEEEEECCC---CccCEEEEcccCCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHH
Confidence 35677777653 589999998875432 349999999999999994499999999999999999999999999984
Q ss_pred C----CCeEEEEEEeCCc
Q psy1156 466 G----PLNMDLLISRTSL 479 (671)
Q Consensus 466 ~----g~~V~L~V~R~~~ 479 (671)
. +..|.|+|.|...
T Consensus 91 ~~~~~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 91 AWNQGGDWIDLVVAVCPP 108 (118)
T ss_dssp HHHHTCSEEEEEEECCCS
T ss_pred hhhcCCCeEEEEEEeCCc
Confidence 3 7899999998543
No 283
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.12 E-value=1.8e-10 Score=100.36 Aligned_cols=83 Identities=22% Similarity=0.310 Sum_probs=70.1
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|.|.+.. .+|||.+.++... .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|+...
T Consensus 10 ~~~~~l~~~~--~g~G~~~~~~~~~-----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (98)
T 2jxo_A 10 PRLCTMKKGP--SGYGFNLHSDKSK-----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (98)
T ss_dssp CEEEEEECTT--TCCCEEEECCCSS-----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred cEEEEEEeCC--CcccEEEEecCCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4678887753 7899999876533 689999999999999999 9999999999999999999999999998654
Q ss_pred C-eEEEEEEeCC
Q psy1156 468 L-NMDLLISRTS 478 (671)
Q Consensus 468 ~-~V~L~V~R~~ 478 (671)
+ .+.|+|.|.+
T Consensus 82 ~~~~~l~v~R~g 93 (98)
T 2jxo_A 82 DETKLLVVDRET 93 (98)
T ss_dssp TEEEEEECCHHH
T ss_pred CcEEEEEEECCc
Confidence 4 4567877754
No 284
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.11 E-value=4.4e-10 Score=102.93 Aligned_cols=93 Identities=24% Similarity=0.318 Sum_probs=76.4
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCC-----CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHH
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSE-----GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAK 460 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~-----g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av 460 (671)
...+.|.+.+. ..+.|||.+.++..... ....|++|..|.++|||+++|.|++||+|++|||+.|.++++.+++
T Consensus 23 ~~p~~v~l~k~-~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 101 (123)
T 2iwq_A 23 MQPRRVELWRE-PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV 101 (123)
T ss_dssp CCCEEEEECCC-TTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCEEEEEEec-CCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 34578888875 35799999987543211 1125899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeEEEEEEeCCc
Q psy1156 461 SIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 461 ~~L~~~g~~V~L~V~R~~~ 479 (671)
.+|+..+..+.|+|.|...
T Consensus 102 ~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 102 EAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHHCCSSEEEEEECCCC
T ss_pred HHHHcCCCeEEEEEEECCc
Confidence 9999777899999988653
No 285
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=4.2e-11 Score=105.69 Aligned_cols=75 Identities=32% Similarity=0.389 Sum_probs=67.5
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.+|||.+.++.+.. .|++|..|.++|||+++| |++||+|++|||++|.++++.+++.+|+.. ...|.|+|.|+..
T Consensus 15 ~~lG~~l~~g~~~~---~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 15 APWGFRLSGGIDFN---QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAET 89 (103)
T ss_dssp SCCSBCCEEETTTT---EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTT
T ss_pred CCcCEEEeccccCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCe
Confidence 68999999876542 479999999999999999 999999999999999988999999999987 4789999988764
No 286
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.11 E-value=1.5e-10 Score=105.81 Aligned_cols=87 Identities=25% Similarity=0.372 Sum_probs=74.9
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCC-CCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRL-KEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrL-r~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.++. ..+|||.+.+..+. .|++|..|.++|||+++| | ++||+|++|||+++.++++.+++.+|+..
T Consensus 8 ~~~~v~l~~~~-~~glG~~~~~~~~~----~~~~V~~V~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (127)
T 1b8q_A 8 NVISVRLFKRK-VGGLGFLVKERVSK----PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGI 81 (127)
T ss_dssp CSEEEEEECTT-TSCCSCCEEECTTS----SCEEECCCSSSSSHHHHS-SCCTTTCCCEETTEECSSSCHHHHHHHHHSC
T ss_pred ceEEEEEEeCC-CCcEeEEEEecCCC----CCEEEEEeCCCCHHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45678888875 37899999876542 489999999999999999 6 99999999999999988999999999986
Q ss_pred CCCcEEEEEEeCCC
Q psy1156 654 KNGSISLHICRRLK 667 (671)
Q Consensus 654 g~~~VtL~V~Rr~~ 667 (671)
....+.|+|.|+..
T Consensus 82 ~g~~v~l~v~R~g~ 95 (127)
T 1b8q_A 82 ASETHVVLILRGPE 95 (127)
T ss_dssp CSSCEEEEEECCCC
T ss_pred CCCeEEEEEEeCCc
Confidence 55689999998764
No 287
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.11 E-value=4.5e-10 Score=98.70 Aligned_cols=88 Identities=28% Similarity=0.381 Sum_probs=70.1
Q ss_pred EEEEEEeC--CCCCcccEEEeeecCCC-----C---CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHH
Q psy1156 389 TMVRVNRR--DFNEELGIYIAKIKNSS-----E---GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQ 458 (671)
Q Consensus 389 ~~V~L~k~--~~~~~LGfsI~gg~~~~-----~---g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~ 458 (671)
..|.+.+. ....+|||++.++.+.. . ....|++|..|.++|||+++| |++||+|++|||+.+.++++.+
T Consensus 6 ~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 84 (104)
T 3sfj_A 6 QRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQ 84 (104)
T ss_dssp EEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred EEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 34555552 22347999999776531 0 112789999999999999999 9999999999999999999999
Q ss_pred HHHHHhc-CCCeEEEEEEeC
Q psy1156 459 AKSIISS-GPLNMDLLISRT 477 (671)
Q Consensus 459 av~~L~~-~g~~V~L~V~R~ 477 (671)
++.+++. .+..+.|+|.|.
T Consensus 85 ~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 85 ARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHHHHTCTTCSEEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEEEEcC
Confidence 9999974 467899999873
No 288
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=4.6e-10 Score=97.37 Aligned_cols=78 Identities=26% Similarity=0.488 Sum_probs=68.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.+.+.+.+..++|||.+. .| +|..|.++|||+++| |++||+|++|||+++.+.++.+++.+|+..
T Consensus 11 ~~~~~~i~~~~~~~~lG~~~~----------~G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 78 (90)
T 1y7n_A 11 NVTTVLIRRPDLRYQLGFSVQ----------NG-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNA 78 (90)
T ss_dssp SCEEEEEEESSTTSCCCEEEE----------TT-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CcceEEEEeCCCccccCeEec----------CC-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 446677777667789999985 35 899999999999999 999999999999999999999999999978
Q ss_pred CCeEEEEEEe
Q psy1156 467 PLNMDLLISR 476 (671)
Q Consensus 467 g~~V~L~V~R 476 (671)
+..+.|+|.+
T Consensus 79 g~~v~l~v~p 88 (90)
T 1y7n_A 79 VGEIHMKTMP 88 (90)
T ss_dssp CEEEEEEEEC
T ss_pred CCeEEEEEEE
Confidence 8899999875
No 289
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.11 E-value=3.2e-10 Score=103.22 Aligned_cols=95 Identities=19% Similarity=0.237 Sum_probs=77.6
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..+.+.|.|.+. ...+|||+|.++.........+++|..|.+++||+++|.|++||+|++|||+.+.++++.+++.+|+
T Consensus 13 ~~~~~~v~l~k~-~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 91 (122)
T 1v5q_A 13 HTETTEVVLTAD-PVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 91 (122)
T ss_dssp CEEEEEEEECCC-SSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHH
T ss_pred cceeEEEEEEeC-CCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 346678888775 3589999999863211111157999999999999999999999999999999999999999999998
Q ss_pred cC--CCeEEEEEEeCCcc
Q psy1156 465 SG--PLNMDLLISRTSLK 480 (671)
Q Consensus 465 ~~--g~~V~L~V~R~~~~ 480 (671)
.. +..+.|+|.|.+..
T Consensus 92 ~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 92 DSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHTTTTCEEEEEEEECCC
T ss_pred hCCCCCeEEEEEEECCcc
Confidence 54 67999999997654
No 290
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.10 E-value=3.3e-10 Score=101.44 Aligned_cols=83 Identities=30% Similarity=0.468 Sum_probs=71.1
Q ss_pred eeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC
Q psy1156 576 FHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN 655 (671)
Q Consensus 576 ~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~ 655 (671)
.+.|.+.+.. ..+|||.|.++.+.. .|++|..|.++++|+++| |++||+|++|||++|.++++.+++.+++..
T Consensus 16 ~~~v~~~~~~-~~~lG~~l~~~~~~~---~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-- 88 (114)
T 1x5n_A 16 EKKVFISLVG-SRGLGCSISSGPIQK---PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS-- 88 (114)
T ss_dssp SEEEEECCCS-SCCCCEEEEECCSSS---CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC--
T ss_pred cEEEEEEEcC-CCceeEEEeecCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--
Confidence 3567776554 489999999875432 589999999999999999 999999999999999999999999999875
Q ss_pred CcEEEEEEeC
Q psy1156 656 GSISLHICRR 665 (671)
Q Consensus 656 ~~VtL~V~Rr 665 (671)
..|.|+|.|+
T Consensus 89 ~~v~l~v~r~ 98 (114)
T 1x5n_A 89 RSLTISIVAA 98 (114)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEEEcC
Confidence 5899999886
No 291
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.69 E-value=8.3e-12 Score=112.71 Aligned_cols=83 Identities=33% Similarity=0.580 Sum_probs=70.4
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhH-hCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAE-DGRLKEGDEILAINGQVCHDLTHLEAISLFKTI 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAar-aGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s 653 (671)
..+.|.|.+.. ..+|||.+.++.+.. .|++|..|.++|||++ +| |++||+|++|||++|.++++.+++.+|+..
T Consensus 27 ~~~~v~l~k~~-~~glG~~l~~g~~~~---~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~ 101 (112)
T 2lob_A 27 GIRKVLLLKED-HEGLGISITGGKEHG---VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQ 101 (112)
Confidence 34567887765 479999999876543 4899999999999999 77 999999999999999989999999999887
Q ss_pred CCCcEEEEEE
Q psy1156 654 KNGSISLHIC 663 (671)
Q Consensus 654 g~~~VtL~V~ 663 (671)
+ +.|.|+|.
T Consensus 102 ~-~~v~l~V~ 110 (112)
T 2lob_A 102 R-GEIEFEVV 110 (112)
Confidence 5 56888774
No 292
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.10 E-value=2e-10 Score=106.26 Aligned_cols=84 Identities=18% Similarity=0.280 Sum_probs=74.0
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
....+.+.|.+.. .+|||++.+.. .+++|..|.++|||+++|+|++||+|++|||+.|.+.++.+++.+|+
T Consensus 25 ~~~~~~~~l~k~~--~glG~~i~~~~-------~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~ 95 (126)
T 1wif_A 25 LNKVIQTKLTVGN--LGLGLVVIQNG-------PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQ 95 (126)
T ss_dssp CCCEEEEEEECCT--TCCCCCEEEET-------TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHT
T ss_pred CCceEEEEEecCC--ceEeEEEEcCC-------CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 3466788888754 89999998643 67999999999999999999999999999999999999999999998
Q ss_pred c--CCCeEEEEEEeC
Q psy1156 465 S--GPLNMDLLISRT 477 (671)
Q Consensus 465 ~--~g~~V~L~V~R~ 477 (671)
. .+..|.|+|.|+
T Consensus 96 ~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 96 NITIGTVLQIKAYRG 110 (126)
T ss_dssp SCCSSCEEEEEEESS
T ss_pred cCCCCCEEEEEEEEC
Confidence 5 478899999997
No 293
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.10 E-value=6.7e-10 Score=92.52 Aligned_cols=69 Identities=32% Similarity=0.579 Sum_probs=61.9
Q ss_pred CCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeC
Q psy1156 587 KKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRR 665 (671)
Q Consensus 587 ~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr 665 (671)
...|||.+. .|++|..|.++|+|+++|+|++||+|++|||+++.++++.++..+|+..+ +.+.|+|.|+
T Consensus 12 ~~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 80 (81)
T 2rcz_A 12 NEEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRD 80 (81)
T ss_dssp TCCCCEEEE---------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC-
T ss_pred CCCCCEEEe---------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEeC
Confidence 468999886 27999999999999999999999999999999999999999999999875 6899999875
No 294
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=8e-10 Score=101.17 Aligned_cols=85 Identities=31% Similarity=0.503 Sum_probs=70.4
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNG 656 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~ 656 (671)
+++.+.... ...|||.+.++.... .|++|..|.++|||+++| |++||+|++|||++|.++++.+++..++.. .
T Consensus 22 ~~v~v~~~~-~~~lG~~~~~~~~~~---~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~--~ 94 (128)
T 1uf1_A 22 KKVNLVLGD-GRSLGLTIRGGAEYG---LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS--R 94 (128)
T ss_dssp EEEEEECCS-SCCCCEEEECCTTTT---CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC--S
T ss_pred EEEEEEECC-CCccCEEEECcccCC---CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC--C
Confidence 455665543 267999998864432 489999999999999999 999999999999999999999999988874 5
Q ss_pred cEEEEEEeCCCC
Q psy1156 657 SISLHICRRLKS 668 (671)
Q Consensus 657 ~VtL~V~Rr~~~ 668 (671)
.|.|+|.|....
T Consensus 95 ~v~l~v~R~g~~ 106 (128)
T 1uf1_A 95 HLILTVKDVGRL 106 (128)
T ss_dssp EEEEEEECCSCC
T ss_pred eEEEEEEECCcc
Confidence 899999987653
No 295
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.09 E-value=6.4e-10 Score=95.33 Aligned_cols=83 Identities=25% Similarity=0.452 Sum_probs=70.7
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|.+.+......|||.+. .|++|..|.++|||+++|.|++||+|++|||+.+.++++.++..+++..+
T Consensus 3 ~~~v~~~~~~~~~~~g~~~~----------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 72 (92)
T 3cyy_A 3 PTKVTLVKSAKNEEYGLRLA----------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK 72 (92)
T ss_dssp CEEEEEECSSTTSCCCEEEE----------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred cEEEEEEeCCCCCCCCEEEe----------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45677777666789999886 47999999999999999999999999999999999999999999999777
Q ss_pred CeEEEEEEeCCcc
Q psy1156 468 LNMDLLISRTSLK 480 (671)
Q Consensus 468 ~~V~L~V~R~~~~ 480 (671)
..+.|+|.|.+..
T Consensus 73 ~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 73 GKLKMVVQRDERA 85 (92)
T ss_dssp TEEEEEEEC----
T ss_pred CcEEEEEEeCCce
Confidence 7999999987653
No 296
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.09 E-value=3.8e-10 Score=96.63 Aligned_cols=82 Identities=27% Similarity=0.319 Sum_probs=66.5
Q ss_pred eEEEeeCCC-CCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CC
Q psy1156 578 TIVFEKGPG-KKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KN 655 (671)
Q Consensus 578 ~V~L~K~~g-~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~ 655 (671)
.+.+.+.++ ...|||.+.... .|++|..|.++|||+++| |++||+|++|||+++.+.++.++..+|+.. ..
T Consensus 6 ~~~~~~~~~~~~~lG~~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 78 (90)
T 2eaq_A 6 RISINQTPGKSLDFGFTIKWDI------PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQET 78 (90)
T ss_dssp EEEEECCTTCSSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCCcccEEEEecC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCC
Confidence 455555542 237999987432 389999999999999999 999999999999999777999999999853 23
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
..|.|+|.|+.
T Consensus 79 ~~v~l~v~R~g 89 (90)
T 2eaq_A 79 GHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEEeCC
Confidence 68999998864
No 297
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.09 E-value=8.3e-10 Score=98.41 Aligned_cols=87 Identities=24% Similarity=0.381 Sum_probs=74.5
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc-C
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS-G 466 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~-~ 466 (671)
.+.|.|.+.. ..+|||.+.+..+. .+++|..|.++|||+++|.|++||+|++|||+.+.++++.++..+++. .
T Consensus 2 ~~~v~l~~~~-~~glG~~~~~~~~~-----~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 75 (112)
T 1qau_A 2 VISVRLFKRK-VGGLGFLVKERVSK-----PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 75 (112)
T ss_dssp EEEEEEECBT-TTBTSEEEEECSSS-----SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred EEEEEEEcCC-CCceeEEEEecCCC-----CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4678888753 58999999976532 689999999999999999339999999999999999999999999985 4
Q ss_pred CCeEEEEEEeCCcc
Q psy1156 467 PLNMDLLISRTSLK 480 (671)
Q Consensus 467 g~~V~L~V~R~~~~ 480 (671)
+..+.|+|.|.+..
T Consensus 76 g~~v~l~v~R~g~~ 89 (112)
T 1qau_A 76 SETHVVLILRGPEG 89 (112)
T ss_dssp SSSEEEEEEECCTT
T ss_pred CCcEEEEEEeCCcc
Confidence 67899999998764
No 298
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.08 E-value=3.5e-10 Score=101.84 Aligned_cols=81 Identities=16% Similarity=0.169 Sum_probs=70.4
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.|.. .+|||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 23 ~~r~v~l~k~~--~~~G~~l~~~--------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~ 91 (109)
T 2vsv_A 23 MPRSIRFTAEE--GDLGFTLRGN--------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSF 91 (109)
T ss_dssp SCEEEEECCGG--GCCCEEEESS--------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCEEEEEEeCC--CceeEEEeCC--------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 45789998853 8999998642 578999999999999999 999999999999999999999999999876
Q ss_pred CCe-EEEEEEeCC
Q psy1156 467 PLN-MDLLISRTS 478 (671)
Q Consensus 467 g~~-V~L~V~R~~ 478 (671)
++. +.|+|.|..
T Consensus 92 ~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 92 GEDEIEMKVVSLL 104 (109)
T ss_dssp TTSCEEEEEESCC
T ss_pred CCCeEEEEEEECC
Confidence 664 999998754
No 299
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.08 E-value=3.3e-10 Score=101.72 Aligned_cols=86 Identities=20% Similarity=0.339 Sum_probs=75.7
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+++.|.+. ..+.|||.+..+... .|++|..|.++|||+++| |++||+|++|||+.+.++++.+++.+++..
T Consensus 13 dp~~~~l~~~-~~~~~G~~l~~~~~~-----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 85 (114)
T 2edz_A 13 NPRECKLSKQ-EGQNYGFFLRIEKDT-----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS 85 (114)
T ss_dssp CCEEEEEECC-TTCCCSCEEECCTTC-----CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHT
T ss_pred CCEEEEEeCC-CCCcccEEEEEecCC-----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5678888775 468999999865432 689999999999999999 999999999999999999999999999877
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..+.|+|.|.+.
T Consensus 86 g~~v~l~v~R~~~ 98 (114)
T 2edz_A 86 GNSVTLLVLDGDS 98 (114)
T ss_dssp CSEEEEEEECHHH
T ss_pred CCEEEEEEEECCc
Confidence 8999999998665
No 300
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.07 E-value=5.7e-10 Score=104.32 Aligned_cols=96 Identities=30% Similarity=0.378 Sum_probs=75.4
Q ss_pred CCCeEEEEEEeCC--CCCcccEEEeeecCCC-----C---CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCC
Q psy1156 385 QEGQTMVRVNRRD--FNEELGIYIAKIKNSS-----E---GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGL 454 (671)
Q Consensus 385 ~~~~~~V~L~k~~--~~~~LGfsI~gg~~~~-----~---g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~ 454 (671)
...++.|.|.+.. ....|||.+.++.+.. . ....|++|..|.++|||+++| |++||+|++|||+.+.++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 3466788887732 1238999998865421 0 012689999999999999999 999999999999999999
Q ss_pred CHHHHHHHHhc-CCCeEEEEEEeCCccc
Q psy1156 455 TMTQAKSIISS-GPLNMDLLISRTSLKK 481 (671)
Q Consensus 455 s~~~av~~L~~-~g~~V~L~V~R~~~~~ 481 (671)
++.+++.+|+. .+..+.|+|.|.+...
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC---
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECCEEE
Confidence 99999999985 4678999999987643
No 301
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.06 E-value=7.1e-10 Score=99.29 Aligned_cols=86 Identities=24% Similarity=0.385 Sum_probs=73.2
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.+.+. ...+|||.+.++.+.. .|++|..|.+++||+++| |++||+|++|||+.+.++.+.+++.+++..
T Consensus 15 ~~~~v~~~~~-~~~~lG~~l~~~~~~~----~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 15 KEKKVFISLV-GSRGLGCSISSGPIQK----PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp SSEEEEECCC-SSCCCCEEEEECCSSS----CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred CcEEEEEEEc-CCCceeEEEeecCCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4477888765 3689999999875433 689999999999999999 999999999999999999988898888854
Q ss_pred CCeEEEEEEeC-Cc
Q psy1156 467 PLNMDLLISRT-SL 479 (671)
Q Consensus 467 g~~V~L~V~R~-~~ 479 (671)
..+.|+|.|. +.
T Consensus 89 -~~v~l~v~r~~g~ 101 (114)
T 1x5n_A 89 -RSLTISIVAAAGR 101 (114)
T ss_dssp -SSEEEEECSSTTT
T ss_pred -CeEEEEEEcCCCC
Confidence 6899999887 54
No 302
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.06 E-value=4.3e-10 Score=103.13 Aligned_cols=83 Identities=23% Similarity=0.371 Sum_probs=70.5
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS-- 464 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~-- 464 (671)
.++.+.+.+ +++|||.+.++.+ .|++|..|.++|||+++| |++||+|++|||+.|.++++.+++.+|.
T Consensus 29 ~~~~~~~~~---~~~lG~~l~~~~~------~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 98 (124)
T 3tsv_A 29 SMKLVKFRK---GDSVGLRLAGGND------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDL 98 (124)
T ss_dssp CCEEEEEEC---SSCCCEEEEECTT------SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred CeEEEEcCC---CCceeEEEecCCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 344555433 4799999987653 689999999999999999 9999999999999999999999999887
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
..+..+.|+|.|.+.
T Consensus 99 ~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 99 PKGEEVTILAQKKKD 113 (124)
T ss_dssp CTTCEEEEEEEECHH
T ss_pred CCCCEEEEEEEECCc
Confidence 467899999998765
No 303
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.05 E-value=1.4e-09 Score=95.76 Aligned_cols=84 Identities=24% Similarity=0.451 Sum_probs=67.9
Q ss_pred CeEEEEEEeCCC-CCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 387 GQTMVRVNRRDF-NEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 387 ~~~~V~L~k~~~-~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
..+.|+|.|.+. ..+|||++...... +. .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..++++
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~~~~--~~-~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~ 81 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSVEED--GI-RRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 81 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEECSS--SS-CEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS
T ss_pred ceeEEEEEeCCCCcCCcCEEEEecCCC--Cc-CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 457899988552 35899999875432 22 689999999999999999 99999999999999999999999999984
Q ss_pred CCCeEEEEEEe
Q psy1156 466 GPLNMDLLISR 476 (671)
Q Consensus 466 ~g~~V~L~V~R 476 (671)
..++|+|..
T Consensus 82 --~~l~ltV~~ 90 (94)
T 3kzd_A 82 --PSLGLLVRT 90 (94)
T ss_dssp --SEEEEEEEE
T ss_pred --CeEEEEEEe
Confidence 568888765
No 304
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=1.5e-09 Score=94.96 Aligned_cols=83 Identities=25% Similarity=0.288 Sum_probs=70.7
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
+.+.+.|.|.+.. .+|||.|.+.. .|++|..|.++ |+.+| |++||+|++|||++|.+++|.+++.+|+
T Consensus 8 ~~~~~~v~l~~~~--~g~G~~i~~~~-------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~ 75 (96)
T 1ujv_A 8 QAELMTLTIVKGA--QGFGFTIADSP-------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILK 75 (96)
T ss_dssp CCCCEEEEEECCS--SSSSEEEEEET-------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CceEEEEEEEeCC--CceeEEEEcCC-------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4466889998854 89999997543 58999999984 67788 9999999999999999999999999999
Q ss_pred c--CCCeEEEEEEeCCc
Q psy1156 465 S--GPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~--~g~~V~L~V~R~~~ 479 (671)
. .+..|.|+|.|.+.
T Consensus 76 ~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 76 DCPIGSETSLIIHRGSG 92 (96)
T ss_dssp HSCTTSEEEEEEECCSS
T ss_pred cCCCCCEEEEEEEECCC
Confidence 6 37899999999764
No 305
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=1.3e-10 Score=101.43 Aligned_cols=82 Identities=20% Similarity=0.353 Sum_probs=71.8
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|+|.+.....+|||.+.+. .+++|..|.+++||+ +| |++||+|++|||+.|.++++.+++.+++..
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~~--------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 77 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISES--------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREA 77 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCSS--------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHC
T ss_pred ccEEEEEEECCCCCcccEEEecC--------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45788888754345899999861 689999999999996 78 999999999999999999999999999988
Q ss_pred CCeEEEEEEeCC
Q psy1156 467 PLNMDLLISRTS 478 (671)
Q Consensus 467 g~~V~L~V~R~~ 478 (671)
+..+.|+|.|..
T Consensus 78 g~~v~l~v~R~~ 89 (96)
T 2edv_A 78 EDSLSITVVRCT 89 (96)
T ss_dssp SSCEEEEEEECC
T ss_pred CCeEEEEEEECC
Confidence 899999999976
No 306
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.04 E-value=5.2e-10 Score=98.72 Aligned_cols=84 Identities=23% Similarity=0.309 Sum_probs=68.3
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCC---CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSE---GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~---g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
+.|.|.+. ..++|||.|.+...... ....+++|..|.+++||+++| |++||+|++|||+.+.++++.+++.+|+.
T Consensus 17 ~~v~l~~~-~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 17 KLVTVEKQ-DNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CEEEEECC-TTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred eEEEEEeC-CCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 46777774 35799999997321110 112689999999999999999 99999999999999999999999999997
Q ss_pred CCCeEEEEE
Q psy1156 466 GPLNMDLLI 474 (671)
Q Consensus 466 ~g~~V~L~V 474 (671)
.++.|.|+|
T Consensus 95 ~~~~v~l~v 103 (104)
T 2z17_A 95 SGNLLTIET 103 (104)
T ss_dssp TTTEEEEEC
T ss_pred CCCcEEEEE
Confidence 777777765
No 307
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.04 E-value=9.3e-10 Score=98.06 Aligned_cols=79 Identities=19% Similarity=0.292 Sum_probs=66.7
Q ss_pred eEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc--CC
Q psy1156 578 TIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI--KN 655 (671)
Q Consensus 578 ~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s--g~ 655 (671)
.+.|.... .++||.+.... .+++|..|.++|||+++| |++||+|++|||.+|...++++++..++.+ ..
T Consensus 20 ~l~l~~~~--~g~G~~l~~~~------~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g 90 (101)
T 3qik_A 20 RLLILPQE--EDYGFDIEEKN------KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSR 90 (101)
T ss_dssp EEEECCCS--SSSSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTT
T ss_pred eEEEEeCC--CcccEEEEccC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccC
Confidence 45565554 78999997632 368999999999999999 999999999999999878999999999873 34
Q ss_pred CcEEEEEEeC
Q psy1156 656 GSISLHICRR 665 (671)
Q Consensus 656 ~~VtL~V~Rr 665 (671)
+.|.|+|+.+
T Consensus 91 ~~v~LLV~~~ 100 (101)
T 3qik_A 91 RPLRLLVATK 100 (101)
T ss_dssp CCEEEEEECC
T ss_pred CeEEEEEecC
Confidence 7899999865
No 308
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.61 E-value=2.1e-11 Score=110.03 Aligned_cols=84 Identities=29% Similarity=0.413 Sum_probs=72.6
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhh-cCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEK-EGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~r-aG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
.+++.|.|.+. ..++|||.+.++.+.. .|++|..|.++|||++ +| |++||+|++|||++|.+.++.+++.+++
T Consensus 26 ~~~~~v~l~k~-~~~glG~~l~~g~~~~----~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~ 99 (112)
T 2lob_A 26 QGIRKVLLLKE-DHEGLGISITGGKEHG----VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILS 99 (112)
Confidence 46678888875 3689999999876543 6899999999999999 78 9999999999999999999999999998
Q ss_pred cCCCeEEEEEE
Q psy1156 465 SGPLNMDLLIS 475 (671)
Q Consensus 465 ~~g~~V~L~V~ 475 (671)
..++.+.|+|.
T Consensus 100 ~~~~~v~l~V~ 110 (112)
T 2lob_A 100 QQRGEIEFEVV 110 (112)
Confidence 77777888774
No 309
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.04 E-value=1.4e-09 Score=90.50 Aligned_cols=75 Identities=25% Similarity=0.493 Sum_probs=65.5
Q ss_pred EEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEE
Q psy1156 393 VNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDL 472 (671)
Q Consensus 393 L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L 472 (671)
.........|||.+. .|++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+..+.|
T Consensus 6 ~~~~~~~~~~g~~~~----------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 75 (81)
T 2rcz_A 6 LVKSRKNEEYGLRLA----------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKM 75 (81)
T ss_dssp EECCSTTCCCCEEEE----------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEE
T ss_pred EEECCCCCCCCEEEe----------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEE
Confidence 334456789999887 4799999999999999999999999999999999999999999999877778999
Q ss_pred EEEeC
Q psy1156 473 LISRT 477 (671)
Q Consensus 473 ~V~R~ 477 (671)
+|.|.
T Consensus 76 ~v~R~ 80 (81)
T 2rcz_A 76 VVQRD 80 (81)
T ss_dssp EEEC-
T ss_pred EEEeC
Confidence 99875
No 310
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.03 E-value=6.4e-10 Score=123.31 Aligned_cols=81 Identities=30% Similarity=0.640 Sum_probs=72.2
Q ss_pred eeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CC
Q psy1156 577 HTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KN 655 (671)
Q Consensus 577 ~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~ 655 (671)
+.|.|.++ .+|||.+.|+.+ .||||..|.+||||+++| |++||+|++|||++|.++++.+++.+|+.. ..
T Consensus 3 r~V~l~k~---~~lG~~i~gg~~-----~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g 73 (468)
T 3shw_A 3 KLVKFRKG---DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKG 73 (468)
T ss_dssp EEEEEECC---SSCCEEEEEETT-----TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred eEEEEecC---CccceEEEccCc-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCC
Confidence 56888875 689999998865 489999999999999999 999999999999999999999999999983 24
Q ss_pred CcEEEEEEeCC
Q psy1156 656 GSISLHICRRL 666 (671)
Q Consensus 656 ~~VtL~V~Rr~ 666 (671)
+.|+|+|.|+.
T Consensus 74 ~~v~L~V~r~g 84 (468)
T 3shw_A 74 EEVTILAQKKK 84 (468)
T ss_dssp SEEEEEEEECH
T ss_pred CEEEEEEEECC
Confidence 78999999864
No 311
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=1.5e-10 Score=106.02 Aligned_cols=90 Identities=26% Similarity=0.421 Sum_probs=73.9
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCC-------------CC-----------CcCcEEEEEEcCCChhhhcCCCCCCCE
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSS-------------EG-----------NIGGFVVAHIVSGGLAEKEGCLELGDE 442 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~-------------~g-----------~~~GI~Vs~V~pGspA~raG~L~~GD~ 442 (671)
..+.|+|.|.. .+|||+|.+..... .| ...+++|..|.+++||+++| |++||+
T Consensus 8 ~~r~v~l~r~~--~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~ 84 (126)
T 2yuy_A 8 GPKTVTLKRTS--QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDR 84 (126)
T ss_dssp SCCCEEEECCS--SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCC
T ss_pred CCEEEEEEECC--CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCE
Confidence 45678998854 78999998521000 00 11569999999999999999 999999
Q ss_pred EEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCCc
Q psy1156 443 IISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTSL 479 (671)
Q Consensus 443 IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~~ 479 (671)
|++|||+.|.++++.+++.+|+..+..|.|+|.|.+.
T Consensus 85 I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 85 IIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999999999999999888999999988654
No 312
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.01 E-value=3.9e-10 Score=99.03 Aligned_cols=82 Identities=24% Similarity=0.310 Sum_probs=70.6
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.|.|.+.. .+|||.+.+. .+++|..|.+++||+++| |++||+|++|||+.+.++++.++..+++..
T Consensus 15 ~~~~v~l~~~~--~g~G~~~~~~--------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 83 (100)
T 1whd_A 15 EKLQITIRRGK--DGFGFTICCD--------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC 83 (100)
T ss_dssp EEEEEEEECCS--SSSSCBCCCS--------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred ceEEEEEECCC--CeeeEEEeCC--------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 44667777643 7899988753 579999999999999999 999999999999999999999999999977
Q ss_pred CCeEEEEEEeCCc
Q psy1156 467 PLNMDLLISRTSL 479 (671)
Q Consensus 467 g~~V~L~V~R~~~ 479 (671)
+..|.|+|.|...
T Consensus 84 ~~~v~l~v~R~~~ 96 (100)
T 1whd_A 84 PSEIILLVWRVSG 96 (100)
T ss_dssp SSEEEEEEEECCS
T ss_pred CCeEEEEEEECCC
Confidence 7789999998653
No 313
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.01 E-value=9.5e-10 Score=119.47 Aligned_cols=83 Identities=29% Similarity=0.615 Sum_probs=72.0
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh-c
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT-I 653 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~-s 653 (671)
..+.|.+.++ .+|||++.++.+ .||+|..|.+||||+++| |++||+|++|||.+|.++++++++.+|+. .
T Consensus 9 ~~~~v~~~k~---~~lG~~i~gg~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~ 79 (391)
T 3tsz_A 9 SMKLVKFRKG---DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 79 (391)
T ss_dssp CEEEEEEECC---SSCCEEEEEETT-----TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CcEEEEeecC---CceeEEEEecCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc
Confidence 3456777776 469999998765 489999999999999999 99999999999999999999999999996 3
Q ss_pred CCCcEEEEEEeCC
Q psy1156 654 KNGSISLHICRRL 666 (671)
Q Consensus 654 g~~~VtL~V~Rr~ 666 (671)
+...|+|+|.|+.
T Consensus 80 ~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 80 KGEEVTILAQKKK 92 (391)
T ss_dssp TTSEEEEEEEECH
T ss_pred CCCeEEEEEeeCC
Confidence 3468999999874
No 314
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.01 E-value=3.9e-10 Score=113.22 Aligned_cols=83 Identities=27% Similarity=0.429 Sum_probs=72.1
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|+|.++. .+|||.|.++.+. .|++|..|.++|+|+++| |++||+|++|||++|.++++.+++.+|+..+
T Consensus 9 ~~r~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g 81 (216)
T 2krg_A 9 RPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (216)
T ss_dssp CCEEEEEECCS--SSSCEEECCCSSS----CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHC
T ss_pred ceEEEEEEeCC--CCceEEEEecCCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 34678888876 7899999877643 389999999999999999 9999999999999999999999999998874
Q ss_pred CCcE-EEEEEeC
Q psy1156 655 NGSI-SLHICRR 665 (671)
Q Consensus 655 ~~~V-tL~V~Rr 665 (671)
..| .|+|.|+
T Consensus 82 -~~v~~l~V~R~ 92 (216)
T 2krg_A 82 -DETKLLVVDRE 92 (216)
T ss_dssp -SEEEEEECCHH
T ss_pred -CeEEEEEEEEC
Confidence 678 8888664
No 315
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.00 E-value=1.6e-09 Score=92.70 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=66.9
Q ss_pred EEEEEEeC-CCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc--
Q psy1156 389 TMVRVNRR-DFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS-- 465 (671)
Q Consensus 389 ~~V~L~k~-~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~-- 465 (671)
+.+.|.+. .....|||.+.... .|++|..|.++|||+++| |++||+|++|||+.+.+.++.++..++..
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~~-------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWDI-------PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQ 76 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEET-------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEecC-------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcC
Confidence 34555542 22347999987532 689999999999999999 99999999999999987888998888873
Q ss_pred CCCeEEEEEEeCC
Q psy1156 466 GPLNMDLLISRTS 478 (671)
Q Consensus 466 ~g~~V~L~V~R~~ 478 (671)
.+..+.|+|.|.+
T Consensus 77 ~g~~v~l~v~R~g 89 (90)
T 2eaq_A 77 ETGHLVMDVRRYG 89 (90)
T ss_dssp HHTEEEEEEEEEC
T ss_pred CCCEEEEEEEeCC
Confidence 5788999998864
No 316
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.00 E-value=1.2e-09 Score=106.07 Aligned_cols=75 Identities=29% Similarity=0.360 Sum_probs=66.2
Q ss_pred CcccEEEeeecCC---CC-CCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEE
Q psy1156 400 EELGIYIAKIKNS---SE-GNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLIS 475 (671)
Q Consensus 400 ~~LGfsI~gg~~~---~~-g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~ 475 (671)
.+|||+|.|+.+. +. ....|++|..|.++|||++ | |++||+|++|||+.|.++++.+++.+++..+..|.|+|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~ 79 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIV 79 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 6899999998642 11 1127999999999999999 8 999999999999999999999999999988889999999
Q ss_pred e
Q psy1156 476 R 476 (671)
Q Consensus 476 R 476 (671)
|
T Consensus 80 r 80 (195)
T 2qbw_A 80 R 80 (195)
T ss_dssp E
T ss_pred E
Confidence 9
No 317
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=5.6e-09 Score=95.52 Aligned_cols=89 Identities=21% Similarity=0.294 Sum_probs=73.4
Q ss_pred CeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcC
Q psy1156 387 GQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSG 466 (671)
Q Consensus 387 ~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~ 466 (671)
..+.+.+... ....|||.+.++.... .|++|..|.+++||+++| |++||+|++|||+.+.++++.+++..++.
T Consensus 20 ~~~~v~v~~~-~~~~lG~~~~~~~~~~----~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~- 92 (128)
T 1uf1_A 20 DEKKVNLVLG-DGRSLGLTIRGGAEYG----LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKS- 92 (128)
T ss_dssp SEEEEEEECC-SSCCCCEEEECCTTTT----CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTT-
T ss_pred cEEEEEEEEC-CCCccCEEEECcccCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-
Confidence 3466776653 2478999999764332 589999999999999999 99999999999999999999888888885
Q ss_pred CCeEEEEEEeCCcccc
Q psy1156 467 PLNMDLLISRTSLKKS 482 (671)
Q Consensus 467 g~~V~L~V~R~~~~~~ 482 (671)
+..+.|+|.|.+....
T Consensus 93 ~~~v~l~v~R~g~~~~ 108 (128)
T 1uf1_A 93 SRHLILTVKDVGRLPH 108 (128)
T ss_dssp CSEEEEEEECCSCCSS
T ss_pred CCeEEEEEEECCcccc
Confidence 5699999999877543
No 318
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.98 E-value=2.7e-09 Score=101.69 Aligned_cols=83 Identities=25% Similarity=0.408 Sum_probs=70.7
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.|.+.. ...|||.+.... .|++|..|.++|||+++| |++||+|++|||+++.++++..+..+++..+
T Consensus 4 ~~r~v~l~k~~-~~~lG~~~~~~~------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 4 DPREVILCKDQ-DGKIGLRLKSID------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp CCEEEEEECCT-TSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEeCC-CCcEeEEEEeCC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 34688998875 478999998643 489999999999999999 9999999999999999998878888888765
Q ss_pred CCcEEEEEEeC
Q psy1156 655 NGSISLHICRR 665 (671)
Q Consensus 655 ~~~VtL~V~Rr 665 (671)
...|.|+|.|.
T Consensus 76 ~~~v~l~vr~~ 86 (166)
T 1w9e_A 76 GEKITMTIRDR 86 (166)
T ss_dssp SSEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 46899999443
No 319
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.98 E-value=1.3e-09 Score=120.93 Aligned_cols=83 Identities=23% Similarity=0.357 Sum_probs=75.0
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc--
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS-- 465 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~-- 465 (671)
+++|.|.|. ++|||.+.++.. .|++|..|.+||||+++| |++||+|++|||+.|.++++.+++.+|+.
T Consensus 2 ~r~V~l~k~---~~lG~~i~gg~~------~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~ 71 (468)
T 3shw_A 2 MKLVKFRKG---DSVGLRLAGGND------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 71 (468)
T ss_dssp EEEEEEECC---SSCCEEEEEETT------TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred ceEEEEecC---CccceEEEccCc------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcC
Confidence 578888773 799999998764 689999999999999999 99999999999999999999999999996
Q ss_pred CCCeEEEEEEeCCcc
Q psy1156 466 GPLNMDLLISRTSLK 480 (671)
Q Consensus 466 ~g~~V~L~V~R~~~~ 480 (671)
.+..|.|+|.|.+..
T Consensus 72 ~g~~v~L~V~r~g~~ 86 (468)
T 3shw_A 72 KGEEVTILAQKKKDV 86 (468)
T ss_dssp TTSEEEEEEEECHHH
T ss_pred CCCEEEEEEEECCcc
Confidence 788999999997653
No 320
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.97 E-value=3.8e-10 Score=99.49 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=70.3
Q ss_pred CCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCC
Q psy1156 399 NEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTS 478 (671)
Q Consensus 399 ~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~ 478 (671)
..+|||.+.++.+.. .+++|..|.+++||+++| |++||+|++|||+.+.++++.++..+|+..+..+.|+|.|.+
T Consensus 14 ~~~lG~~l~~g~~~~----~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g 88 (103)
T 1v5l_A 14 PAPWGFRLSGGIDFN----QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAE 88 (103)
T ss_dssp SSCCSBCCEEETTTT----EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCT
T ss_pred CCCcCEEEeccccCC----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECC
Confidence 379999999887543 589999999999999999 999999999999999999999999999977889999999987
Q ss_pred cccc
Q psy1156 479 LKKS 482 (671)
Q Consensus 479 ~~~~ 482 (671)
....
T Consensus 89 ~~~~ 92 (103)
T 1v5l_A 89 TRLW 92 (103)
T ss_dssp TTTS
T ss_pred eEcc
Confidence 6433
No 321
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.97 E-value=1.8e-09 Score=98.50 Aligned_cols=91 Identities=23% Similarity=0.358 Sum_probs=76.8
Q ss_pred CCCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 385 QEGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 385 ~~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
...++.|.|.+.. ..+|||.+.+..+. .+++|..|.++|||+++|.|++||+|++|||+.+.++++.++..+|+
T Consensus 6 ~~~~~~v~l~~~~-~~glG~~~~~~~~~-----~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~ 79 (127)
T 1b8q_A 6 EPNVISVRLFKRK-VGGLGFLVKERVSK-----PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLR 79 (127)
T ss_dssp CCCSEEEEEECTT-TSCCSCCEEECTTS-----SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHH
T ss_pred CCceEEEEEEeCC-CCcEeEEEEecCCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 4467889998853 57999999876532 68999999999999999934999999999999999999999999998
Q ss_pred c-CCCeEEEEEEeCCccc
Q psy1156 465 S-GPLNMDLLISRTSLKK 481 (671)
Q Consensus 465 ~-~g~~V~L~V~R~~~~~ 481 (671)
. .+..+.|+|.|.+...
T Consensus 80 ~~~g~~v~l~v~R~g~~~ 97 (127)
T 1b8q_A 80 GIASETHVVLILRGPEGF 97 (127)
T ss_dssp SCCSSCEEEEEECCCCSE
T ss_pred hCCCCeEEEEEEeCCceE
Confidence 5 4578999999987643
No 322
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.97 E-value=2.9e-09 Score=97.04 Aligned_cols=86 Identities=21% Similarity=0.278 Sum_probs=73.1
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.|+|.+.. .+|||.+.++... .|++|..|.++|||+++| |++||+|++|||+.+.++++.++..+|+.
T Consensus 8 ~~~r~v~l~~~~--~g~G~~l~~~~~~-----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~ 79 (128)
T 2kjd_A 8 LRPRLCTMKKGP--SGYGFNLHSDKSK-----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (128)
T ss_dssp CCCEEEEEECCS--SSCCEEEEECSSS-----CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CCcEEEEEecCC--CcccEEEEecCCC-----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 356788988854 7899999976543 689999999999999999 99999999999999999999999999986
Q ss_pred C-CCeEEEEEEeCCc
Q psy1156 466 G-PLNMDLLISRTSL 479 (671)
Q Consensus 466 ~-g~~V~L~V~R~~~ 479 (671)
. +..+.|+|.|.+.
T Consensus 80 ~~~~~~~l~v~R~g~ 94 (128)
T 2kjd_A 80 GGDETKLLVVDRETD 94 (128)
T ss_dssp TCSEEEEEEECHHHH
T ss_pred CCCCEEEEEEEeCCc
Confidence 5 4456788888654
No 323
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=1.3e-09 Score=98.73 Aligned_cols=88 Identities=23% Similarity=0.420 Sum_probs=72.8
Q ss_pred CCeEEEEEEeCCCC-CcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 386 EGQTMVRVNRRDFN-EELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 386 ~~~~~V~L~k~~~~-~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
..++.|.|.+.... .+|||+|.+.... +. .+++|..|.+++||+++| |++||+|++|||+.+..+++.++..+++
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~--~~-~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~ 89 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED--GI-RRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLS 89 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET--TE-EEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHT
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC--Cc-CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 46688999885422 3799999875432 11 579999999999999999 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCc
Q psy1156 465 SGPLNMDLLISRTSL 479 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~ 479 (671)
. ..+.|+|.|...
T Consensus 90 ~--~~v~l~v~R~p~ 102 (114)
T 2d8i_A 90 Q--PSLGLLVRTYPE 102 (114)
T ss_dssp S--SEEEEEEEECCC
T ss_pred C--CcEEEEEEECCC
Confidence 4 489999998654
No 324
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.90 E-value=3.9e-09 Score=114.67 Aligned_cols=85 Identities=22% Similarity=0.348 Sum_probs=74.9
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh-
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS- 464 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~- 464 (671)
..++.|.+.+. ++|||++.++.+ .|++|..|.+||||+++| |++||+|++|||.++.++++++++.+|+
T Consensus 8 ~~~~~v~~~k~---~~lG~~i~gg~~------~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~ 77 (391)
T 3tsz_A 8 PSMKLVKFRKG---DSVGLRLAGGND------VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLD 77 (391)
T ss_dssp -CEEEEEEECC---SSCCEEEEEETT------TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCcEEEEeecC---CceeEEEEecCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 35677888774 479999998764 689999999999999999 9999999999999999999999999998
Q ss_pred -cCCCeEEEEEEeCCcc
Q psy1156 465 -SGPLNMDLLISRTSLK 480 (671)
Q Consensus 465 -~~g~~V~L~V~R~~~~ 480 (671)
..+..|.|+|.|.+..
T Consensus 78 ~~~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 78 LPKGEEVTILAQKKKDV 94 (391)
T ss_dssp SCTTSEEEEEEEECHHH
T ss_pred hcCCCeEEEEEeeCCcc
Confidence 4788999999997653
No 325
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.90 E-value=7.5e-09 Score=94.24 Aligned_cols=90 Identities=20% Similarity=0.241 Sum_probs=68.2
Q ss_pred eeEEEeeCCC--CCcccEEEecCCCCCCCCcceeEEEeCC--CCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh
Q psy1156 577 HTIVFEKGPG--KKGLGFTIVGGKDSPRGAIGIFIKSILD--NGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT 652 (671)
Q Consensus 577 ~~V~L~K~~g--~~~LGfsL~Gg~ds~~g~~GVfIssV~p--gSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~ 652 (671)
+.|+|...+. .+.+||.|...........|++|..|.+ ++||+++| |++||+|++|||++|.+++|.++..+|+.
T Consensus 14 ~~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~ 92 (118)
T 2yub_A 14 YSVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQ 92 (118)
T ss_dssp CEEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHC
T ss_pred ceeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHh
Confidence 3555554221 2456666652221111235899999999 99999999 99999999999999999999999999998
Q ss_pred cCCCcEEEEEEeCCCC
Q psy1156 653 IKNGSISLHICRRLKS 668 (671)
Q Consensus 653 sg~~~VtL~V~Rr~~~ 668 (671)
. ...|.|+|.|+...
T Consensus 93 ~-g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 93 T-SQTLQLLIEHDPVP 107 (118)
T ss_dssp C-SSCEEEEEEECSSC
T ss_pred C-CCEEEEEEEECCEE
Confidence 7 47899999987653
No 326
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.87 E-value=1.9e-09 Score=116.92 Aligned_cols=91 Identities=24% Similarity=0.370 Sum_probs=74.8
Q ss_pred ceeeEEEeeCCCCCcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcC
Q psy1156 575 TFHTIVFEKGPGKKGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIK 654 (671)
Q Consensus 575 ~~~~V~L~K~~g~~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg 654 (671)
..+.|.+.+..+ ++|||.|.+.... ....|++|..|.++|||+++|+|++||+|++|||++|.+++|.+++.+|+..+
T Consensus 204 ~~~~V~i~k~~g-e~lG~~i~~~~~g-~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 281 (388)
T 3suz_A 204 NCKELQLEKHKG-EILGVVVVESGWG-SILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK 281 (388)
T ss_dssp CCEEEEECCCSS-CCCCCCCBCC----CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred cceEEEEECCCC-CceeEEEEecCCC-CcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence 346888988753 7899999874321 11346999999999999999999999999999999999999999999999873
Q ss_pred -CCcEEEEEEeCCC
Q psy1156 655 -NGSISLHICRRLK 667 (671)
Q Consensus 655 -~~~VtL~V~Rr~~ 667 (671)
...|.|+|.|...
T Consensus 282 ~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 282 NQTQVKLNIVSCPP 295 (388)
T ss_dssp TCSCEEEEEEECCS
T ss_pred CCCccccccccccc
Confidence 3459999988764
No 327
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=1.2e-09 Score=98.48 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=68.0
Q ss_pred eEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCC
Q psy1156 388 QTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGP 467 (671)
Q Consensus 388 ~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g 467 (671)
.+.|.|.+. ..+|||.+.+. .+++|..|.+++||+++| |++||+|++|||+.|.++++.+++.+|+..+
T Consensus 16 ~r~v~l~~~--~~~~G~~l~~~--------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~ 84 (111)
T 1vae_A 16 PRGIHFTVE--EGDLGFTLRGN--------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFG 84 (111)
T ss_dssp CCCCCEECC--SSCCSCCEESS--------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTT
T ss_pred CeEEEEEcC--CCcccEEEeCC--------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 356778774 48999998643 578999999999999999 9999999999999999999999999998654
Q ss_pred C-eEEEEEEeCC
Q psy1156 468 L-NMDLLISRTS 478 (671)
Q Consensus 468 ~-~V~L~V~R~~ 478 (671)
+ .+.|+|.+..
T Consensus 85 ~~~v~l~V~~~~ 96 (111)
T 1vae_A 85 GEEVEMKVVSLL 96 (111)
T ss_dssp TSEECEEEECEE
T ss_pred CceEEEEEEecC
Confidence 4 5999998743
No 328
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.83 E-value=1.9e-08 Score=91.63 Aligned_cols=91 Identities=18% Similarity=0.231 Sum_probs=69.7
Q ss_pred EEEEEEeC--CCCCcccEEEeeecCCCCCCcCcEEEEEEcC--CChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh
Q psy1156 389 TMVRVNRR--DFNEELGIYIAKIKNSSEGNIGGFVVAHIVS--GGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS 464 (671)
Q Consensus 389 ~~V~L~k~--~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~p--GspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~ 464 (671)
+.|+|.+. ...+.+||.+......... ..|++|..|.+ ++||+++| |++||+|++|||+.|..+++.++..+|.
T Consensus 14 ~~v~l~~~~~~~~g~~G~~v~l~~~~~~~-~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~ 91 (118)
T 2yub_A 14 YSVTLISMPATTECRRGFSVTVESASSNY-ATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIK 91 (118)
T ss_dssp CEEEEEEECSCSSSSCSSEEEEECTTSSS-CCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHH
T ss_pred ceeEEeccCCccCCCceEEEEeccccccC-CCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 44555441 2235677777643221111 16899999999 99999999 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCCccc
Q psy1156 465 SGPLNMDLLISRTSLKK 481 (671)
Q Consensus 465 ~~g~~V~L~V~R~~~~~ 481 (671)
..+..+.|+|.|.+...
T Consensus 92 ~~g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 92 QTSQTLQLLIEHDPVPQ 108 (118)
T ss_dssp CCSSCEEEEEEECSSCC
T ss_pred hCCCEEEEEEEECCEEE
Confidence 66778999999987643
No 329
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.83 E-value=1.5e-08 Score=90.37 Aligned_cols=78 Identities=24% Similarity=0.378 Sum_probs=66.3
Q ss_pred EEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc---
Q psy1156 389 TMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS--- 465 (671)
Q Consensus 389 ~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~--- 465 (671)
..+.|.+. ..++||.+.... .+++|..|.+||||+++| |++||+|++|||..|...++++++..++.
T Consensus 19 ~~l~l~~~--~~g~G~~l~~~~-------~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~ 88 (101)
T 3qik_A 19 KRLLILPQ--EEDYGFDIEEKN-------KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFC 88 (101)
T ss_dssp EEEEECCC--SSSSSEEEEEET-------TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEeC--CCcccEEEEccC-------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhc
Confidence 34555553 489999998643 678999999999999999 99999999999999988899999999985
Q ss_pred CCCeEEEEEEe
Q psy1156 466 GPLNMDLLISR 476 (671)
Q Consensus 466 ~g~~V~L~V~R 476 (671)
.+..|.|.|..
T Consensus 89 ~g~~v~LLV~~ 99 (101)
T 3qik_A 89 SRRPLRLLVAT 99 (101)
T ss_dssp TTCCEEEEEEC
T ss_pred cCCeEEEEEec
Confidence 58899999864
No 330
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.81 E-value=3.7e-09 Score=106.12 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=74.7
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
...+.|+|.+.. .+|||.|.++... .|++|..|.+|+||+++| |++||+|++|||+.|.++++.+++.+|+.
T Consensus 8 ~~~r~v~l~k~~--~glG~~l~~~~~~-----~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~ 79 (216)
T 2krg_A 8 LRPRLCTMKKGP--SGYGFNLHSDKSK-----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRA 79 (216)
T ss_dssp CCCEEEEEECCS--SSSCEEECCCSSS-----CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHH
T ss_pred cceEEEEEEeCC--CCceEEEEecCCC-----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456889998754 7899999876532 589999999999999999 99999999999999999999999999986
Q ss_pred CCCeE-EEEEEeCCcc
Q psy1156 466 GPLNM-DLLISRTSLK 480 (671)
Q Consensus 466 ~g~~V-~L~V~R~~~~ 480 (671)
.+..| .|+|.|.+..
T Consensus 80 ~g~~v~~l~V~R~g~~ 95 (216)
T 2krg_A 80 GGDETKLLVVDRETDE 95 (216)
T ss_dssp HCSEEEEEECCHHHHH
T ss_pred cCCeEEEEEEEECCEE
Confidence 67788 8888876653
No 331
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=1e-08 Score=93.51 Aligned_cols=91 Identities=25% Similarity=0.427 Sum_probs=72.2
Q ss_pred CCeEEEEEEeCCCCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc
Q psy1156 386 EGQTMVRVNRRDFNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS 465 (671)
Q Consensus 386 ~~~~~V~L~k~~~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~ 465 (671)
..++.+.+.+......|||.+....... .. .|++|..|.+++||+++|+|++||+|++|||+.|. ++.++..+|+.
T Consensus 18 ~~~~~~~~~~~~~~~~lG~~~~~~~~~~-~~-~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~ 93 (124)
T 1wh1_A 18 LELEEVDLYRMNSQDKLGLTVCYRTDDE-DD-IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTS 93 (124)
T ss_dssp CEECCBCCCCSSTTCCCCEEEECCCCCS-SC-CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTC
T ss_pred ceEEEEEEEecCCCCcccEEEEecCCCC-CC-CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHh
Confidence 3445566666554568999998654321 11 68999999999999999999999999999999997 47888888985
Q ss_pred C-CCeEEEEEEeCCcc
Q psy1156 466 G-PLNMDLLISRTSLK 480 (671)
Q Consensus 466 ~-g~~V~L~V~R~~~~ 480 (671)
. +..|.|+|.|.+..
T Consensus 94 ~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 94 EENKNFSLLIARPELQ 109 (124)
T ss_dssp SSCCSCCEEEEECSSC
T ss_pred CCCCEEEEEEEECCEE
Confidence 3 67899999998764
No 332
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.52 E-value=4.1e-08 Score=85.25 Aligned_cols=58 Identities=24% Similarity=0.428 Sum_probs=51.6
Q ss_pred ceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 606 GIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 606 GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
|++|..|.++|||++ | |++||+|++|||+++. +..++..+|+.. +...|.|+|.|+.+
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 60 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEK 60 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSC
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 789999999999999 8 9999999999999998 678999999876 34689999999764
No 333
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.51 E-value=9.7e-08 Score=88.46 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=71.7
Q ss_pred ccccchhccccCCCCCCCCeEEEEEEeCCC-----CCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEE
Q psy1156 369 SMMEISELSSENSEDSQEGQTMVRVNRRDF-----NEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEI 443 (671)
Q Consensus 369 s~~~~v~~~~~~~~~~~~~~~~V~L~k~~~-----~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~I 443 (671)
+.++.+..++...+...+.+..|.+..-.. ...||+... .. .|++|..|.++|||+ +| |++||+|
T Consensus 11 ~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~----~~----~g~~V~~V~~~spA~-aG-L~~GD~I 80 (134)
T 2l97_A 11 NDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSN----VT----SGVIVRSVQSNMPAN-GH-LEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSS----SC----SCEEEEECSTTSGGG-TT-SCSSCEE
T ss_pred HHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcC----CC----CCEEEEEECCCCchH-HC-CCCCCEE
Confidence 445556666666666667777777655321 112443211 01 689999999999999 99 9999999
Q ss_pred EccCCeeccCCCHHHHHHHHhc--CCCeEEEEEEeCCccc
Q psy1156 444 ISVNGQRLRGLTMTQAKSIISS--GPLNMDLLISRTSLKK 481 (671)
Q Consensus 444 laVNG~~V~~~s~~~av~~L~~--~g~~V~L~V~R~~~~~ 481 (671)
++|||+.+.++ .++...+.. .+..+.|+|.|++...
T Consensus 81 ~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 118 (134)
T 2l97_A 81 TKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKEE 118 (134)
T ss_dssp EEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEEE
T ss_pred EEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 99999999764 556666653 5789999999987643
No 334
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.50 E-value=2.7e-07 Score=80.99 Aligned_cols=59 Identities=24% Similarity=0.352 Sum_probs=51.2
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+. | |++||+|++|||++|. +..++..+|... +...|.|+|.|+.+
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 5899999999999995 8 9999999999999998 678888888864 34679999988753
No 335
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.50 E-value=2e-07 Score=79.67 Aligned_cols=59 Identities=24% Similarity=0.256 Sum_probs=50.7
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRL 666 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~ 666 (671)
.|+.|..+.|+|+|+++| |++||+|++|||++|. ++.++..++... +...+.|.|.|+.
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 478899999999999999 9999999999999998 678888888754 2367999998875
No 336
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.47 E-value=4.9e-07 Score=78.84 Aligned_cols=57 Identities=18% Similarity=0.128 Sum_probs=50.3
Q ss_pred eEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCC-CcEEEEEEeCCC
Q psy1156 608 FIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKN-GSISLHICRRLK 667 (671)
Q Consensus 608 fIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~-~~VtL~V~Rr~~ 667 (671)
+|..|.++|||+++| |++||+|++|||+.|. ++.++...|..... ..|.|+|.|...
T Consensus 5 ~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 5 VVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp BEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred EEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 789999999999999 9999999999999998 77888888876533 579999998864
No 337
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.47 E-value=2.9e-07 Score=78.72 Aligned_cols=58 Identities=24% Similarity=0.385 Sum_probs=50.8
Q ss_pred ceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCC
Q psy1156 606 GIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRL 666 (671)
Q Consensus 606 GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~ 666 (671)
+++|..|.++|||+++| |++||+|++|||+++. ++.++..+|.......+.|+|.|+.
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g 62 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQG 62 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECC
Confidence 46889999999999999 9999999999999998 6789998888764468999998865
No 338
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.47 E-value=4.4e-07 Score=80.85 Aligned_cols=57 Identities=26% Similarity=0.444 Sum_probs=51.7
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRL 666 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~ 666 (671)
.|++|..|.++|||+++| |++||+|++|||+++. +..++..+|+. + ..+.|+|.|+.
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~-~~v~l~v~R~g 91 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-Q-SQLAVQIRRGR 91 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-C-SSEEEEEEETT
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C-CeEEEEEEECC
Confidence 589999999999999999 9999999999999998 67888888887 3 68999998865
No 339
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.44 E-value=1.9e-07 Score=81.18 Aligned_cols=59 Identities=31% Similarity=0.441 Sum_probs=51.8
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||++ | |++||+|++|||.++. +..++..+|+.. ....|.|.|.|+.+
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPIN--TSEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCC--CHHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 4899999999999998 8 9999999999999998 578888888875 34689999998753
No 340
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.40 E-value=6e-07 Score=83.12 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=51.7
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+ +| |++||+|++|||+++. +..++..+|... ....|.|+|.|+.+
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 116 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIA--SSTDLQSALYNHSIGDTIKITYYRNGK 116 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECC--CHHHHHHHHHHSSTTCEEEEEEEETTE
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 589999999999999 99 9999999999999998 668888888775 34689999998753
No 341
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.36 E-value=1e-06 Score=78.49 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=50.6
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRL 666 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~ 666 (671)
.|++|..|.++|||+++| |++||+|++|||+++. +..++..+|+. + ..+.|+|.|+.
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-g-~~v~l~v~R~g 91 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVLT-E-SPLLLEVRRGN 91 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-C-SSEEEEEEETT
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C-CeEEEEEEECC
Confidence 589999999999999999 9999999999999998 67888888854 3 68999998865
No 342
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.31 E-value=1.6e-06 Score=93.62 Aligned_cols=76 Identities=14% Similarity=0.314 Sum_probs=63.2
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.++|+.+..... ...|++|..|.++|||+++| |++||+|++|||++|.+++..+++.+|+......|.|+|.|...
T Consensus 85 ~giG~~~~~~~~---~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGG---SGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTT---CSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEeec---CCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 578988864310 11479999999999999999 99999999999999999989999999986544679999988653
No 343
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.31 E-value=1.1e-06 Score=86.97 Aligned_cols=73 Identities=19% Similarity=0.217 Sum_probs=51.7
Q ss_pred cccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCC-CEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCC
Q psy1156 589 GLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEG-DEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRL 666 (671)
Q Consensus 589 ~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~G-DrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~ 666 (671)
++|++...+.. +..|++|..|.++|||+++| |++| |+|++|||++|..+..... .+++..+...|.|+|.|..
T Consensus 3 g~~~~~~~~~~---~~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 3 GSSQSVEIPGG---GTEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp -----CCCTTS---SSEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETT
T ss_pred chhhhhhccCC---CCCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecC
Confidence 34454443332 23689999999999999999 9999 9999999999986543322 3444444578999998864
No 344
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.24 E-value=1.7e-06 Score=76.47 Aligned_cols=58 Identities=26% Similarity=0.271 Sum_probs=47.6
Q ss_pred ceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCC
Q psy1156 606 GIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRL 666 (671)
Q Consensus 606 GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~ 666 (671)
|++|..+.|+++|+++| |++||+|++|||++|.. +.++..++... +...+.|.|.|+.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~--~~d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTS--TTHHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCeEEEEEEECC
Confidence 67788889999999999 99999999999999984 45666666643 2368999998875
No 345
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.20 E-value=3e-06 Score=75.41 Aligned_cols=59 Identities=19% Similarity=0.370 Sum_probs=52.1
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCCcc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTSLK 480 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~~~ 480 (671)
.|++|..|.++|||+++| |++||+|++|||+.+.. ..++...+.. +..+.|+|.|++..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~-~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRET 93 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH-CSSEEEEEEETTEE
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 789999999999999999 99999999999999974 6777777775 67899999997753
No 346
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.18 E-value=1.6e-06 Score=73.96 Aligned_cols=59 Identities=24% Similarity=0.284 Sum_probs=49.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEeCCc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISRTSL 479 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~ 479 (671)
.|+.|..+.|++||+++| |++||+|++|||+.+.++ .++..++. ..+..+.|+|.|++.
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~~--~d~~~~~~~~~~g~~v~l~v~R~g~ 79 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDP--NVMNTLFQSMNEMTEMSLTVERDGQ 79 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTCH--HHHHHHHHTGGGCSEEEEEEEETTE
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 578888999999999999 999999999999999754 45555555 246789999999875
No 347
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.15 E-value=5.4e-06 Score=87.02 Aligned_cols=60 Identities=22% Similarity=0.372 Sum_probs=53.2
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHh-cCCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKT-IKNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~-sg~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||+++. +..++..+|+. .+...|.|+|.|+.+
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 304 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRDDK 304 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEEEEESSSC
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 9999999999999998 67888888886 334689999998764
No 348
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.15 E-value=5.5e-06 Score=87.00 Aligned_cols=73 Identities=16% Similarity=0.311 Sum_probs=59.2
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEe-C
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICR-R 665 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~R-r 665 (671)
..||+.+..... ..|++|..|.+++||+++| |++||+|++|||+++. +..++..+|... +...|.|+|.| +
T Consensus 229 ~~lGi~~~~~~~----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~ 301 (324)
T 1y8t_A 229 ASLGVQVTNDKD----TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPS 301 (324)
T ss_dssp EECCEEEESCSS----SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSS
T ss_pred cccceEeeeccC----CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 467888764321 2489999999999999999 9999999999999998 668888888753 34679999998 5
Q ss_pred CC
Q psy1156 666 LK 667 (671)
Q Consensus 666 ~~ 667 (671)
.+
T Consensus 302 g~ 303 (324)
T 1y8t_A 302 GG 303 (324)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 349
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.14 E-value=3.4e-06 Score=73.94 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=50.2
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc--CCCeEEEEEEeCCcc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS--GPLNMDLLISRTSLK 480 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~--~g~~V~L~V~R~~~~ 480 (671)
.|++|..|.+++||+. | |++||+|++|||+.+.. ..++..+|.. .+..+.|+|.|.+..
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~R~g~~ 67 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKINYKHGDKN 67 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 7899999999999995 8 99999999999999975 4566666663 578899999998764
No 350
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.11 E-value=1e-06 Score=76.39 Aligned_cols=58 Identities=28% Similarity=0.384 Sum_probs=50.3
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc--CCCeEEEEEEeCCcc
Q psy1156 419 GFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS--GPLNMDLLISRTSLK 480 (671)
Q Consensus 419 GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~--~g~~V~L~V~R~~~~ 480 (671)
|++|..|.++|||++ | |++||+|++|||+.+.. ..++..++.. .+..+.|+|.|++..
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 678999999999999 9 99999999999999975 4677788874 478899999998764
No 351
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.10 E-value=4.5e-06 Score=89.03 Aligned_cols=60 Identities=28% Similarity=0.409 Sum_probs=53.8
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||++|. +..++..+|... +...|.|+|.|+.+
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGK 323 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 9999999999999998 778999888764 34689999999764
No 352
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.10 E-value=8.1e-06 Score=88.12 Aligned_cols=75 Identities=23% Similarity=0.429 Sum_probs=63.2
Q ss_pred CcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh-cCCCeEEEEEEeCC
Q psy1156 400 EELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS-SGPLNMDLLISRTS 478 (671)
Q Consensus 400 ~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~-~~g~~V~L~V~R~~ 478 (671)
.++|+.+....... .+++|..|.+++||+++| |++||+|++|||+.+.++...++..+|+ ..+..|.|+|.|.+
T Consensus 85 ~giG~~~~~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g 159 (388)
T 1fc6_A 85 TGVGLEITYDGGSG----KDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPG 159 (388)
T ss_dssp BBCSEEEEECTTCS----SCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETT
T ss_pred EEEEEEEEEeecCC----CcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 57888887531101 689999999999999999 9999999999999999998888888887 35678999999987
Q ss_pred c
Q psy1156 479 L 479 (671)
Q Consensus 479 ~ 479 (671)
.
T Consensus 160 ~ 160 (388)
T 1fc6_A 160 A 160 (388)
T ss_dssp E
T ss_pred C
Confidence 5
No 353
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.05 E-value=6.7e-07 Score=95.43 Aligned_cols=97 Identities=18% Similarity=0.254 Sum_probs=69.6
Q ss_pred cchhccccCCCCCCCCeEEEEEEeCC--CCCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCe
Q psy1156 372 EISELSSENSEDSQEGQTMVRVNRRD--FNEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQ 449 (671)
Q Consensus 372 ~~v~~~~~~~~~~~~~~~~V~L~k~~--~~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~ 449 (671)
+....++...+...+++..|.+..-. ....||+.. . .|++|..|.++|||+++| |++||+|++|||+
T Consensus 225 ~~~~~~l~~~g~v~~~~lGv~~~~~~~~~a~~~gl~~------~----~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~ 293 (345)
T 3stj_A 225 RTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDV------Q----RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGK 293 (345)
T ss_dssp HHHHHHHHHHSSCCCEECCEEEEECCHHHHHHTTCSC------C----SSEEEEEECTTSHHHHHT-CCTTCEECEETTE
T ss_pred HHHHHHHHhcccccccccceeeEeecHHHHHhcCCCC------C----ceEEEEEeccCChHHHcC-CCCCCEEEEECCE
Confidence 33444444455556667767665421 112344421 1 789999999999999999 9999999999999
Q ss_pred eccCCCHHHHHHHHh--cCCCeEEEEEEeCCccc
Q psy1156 450 RLRGLTMTQAKSIIS--SGPLNMDLLISRTSLKK 481 (671)
Q Consensus 450 ~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~~~ 481 (671)
.|.. ..+...++. ..+..+.|+|.|+++..
T Consensus 294 ~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (345)
T 3stj_A 294 PLNS--FAELRSRIATTEPGTKVKLGLLRNGKPL 325 (345)
T ss_dssp ECSC--HHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred ECCC--HHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 9974 556666666 36889999999988743
No 354
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.04 E-value=1e-05 Score=71.47 Aligned_cols=59 Identities=24% Similarity=0.302 Sum_probs=47.7
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEeCCc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISRTSL 479 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~ 479 (671)
.|+.|..+.|++||+++| |++||+|++|||+.|.++... ..++. ..+..+.|+|.|++.
T Consensus 37 ~G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~d~--~~~~~~~~~g~~v~l~v~R~g~ 97 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPNVM--NTLFQSMNEMTEMSLTVERDGQ 97 (105)
T ss_dssp EEEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTTHH--HHHHHHHTTCSEEEEEEEETTE
T ss_pred EEEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHHHH--HHHHHhcCCCCeEEEEEEECCE
Confidence 467788888888999999 999999999999999877543 33343 357889999999875
No 355
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.04 E-value=7.8e-06 Score=72.68 Aligned_cols=59 Identities=20% Similarity=0.332 Sum_probs=51.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCCcc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTSLK 480 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~~~ 480 (671)
.|++|..|.+++||+++| |++||+|++|||+.+.. ..++...+. .+..+.|+|.|.+..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~-~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL-TESPLLLEVRRGNDD 93 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH-HCSSEEEEEEETTEE
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh-CCCeEEEEEEECCEE
Confidence 689999999999999999 99999999999999975 466666665 467899999997753
No 356
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.03 E-value=8.9e-06 Score=74.66 Aligned_cols=57 Identities=25% Similarity=0.232 Sum_probs=48.8
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRL 666 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~ 666 (671)
.|++|..|.+++||+++ |++||+|++|||++|. +..++..+|+.. ....|.|+| |+.
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g 82 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQG 82 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECC
Confidence 48999999999999998 9999999999999998 678888888753 346799999 753
No 357
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.01 E-value=7.6e-06 Score=71.23 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=47.2
Q ss_pred EEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc-C-CCeEEEEEEeCCc
Q psy1156 420 FVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS-G-PLNMDLLISRTSL 479 (671)
Q Consensus 420 I~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~-~-g~~V~L~V~R~~~ 479 (671)
.+|..|.++|||+++| |++||+|++|||+.+..+ .++...|.. . +..+.|+|.|.+.
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4688999999999999 999999999999999754 566666653 2 3689999999764
No 358
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.01 E-value=3.3e-06 Score=73.30 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=51.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhc--CCCeEEEEEEeCCcc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISS--GPLNMDLLISRTSLK 480 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~--~g~~V~L~V~R~~~~ 480 (671)
.|++|..|.++|||++ | |++||+|++|||..+.. ..++..++.. .+..+.|+|.|.+..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 6899999999999998 8 99999999999999975 4667777764 578999999998764
No 359
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.01 E-value=9.5e-06 Score=86.36 Aligned_cols=76 Identities=18% Similarity=0.337 Sum_probs=58.4
Q ss_pred cccEEEecCCCC-CCCCcceeEEEeCCCCHHhHhCCCCC-----------CCEEEEECCeecCCCCHHHHHHHHHhc-CC
Q psy1156 589 GLGFTIVGGKDS-PRGAIGIFIKSILDNGQAAEDGRLKE-----------GDEILAINGQVCHDLTHLEAISLFKTI-KN 655 (671)
Q Consensus 589 ~LGfsL~Gg~ds-~~g~~GVfIssV~pgSpAaraGrLr~-----------GDrILeVNG~sV~~lSheEAV~lLK~s-g~ 655 (671)
.||+.+...... ..+..|++|..|.++|||+++| |++ ||+|++|||++|. +..++..+|... +.
T Consensus 234 ~lGi~~~~~~~~~~~~~~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~--~~~dl~~~l~~~~~g 310 (348)
T 3qo6_A 234 ILGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVS--NGSDLYRILDQCKVG 310 (348)
T ss_dssp ECCCEECCTTTTTTTTCSSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCS--SSHHHHHHHTTCCTT
T ss_pred ecCcEEccchhhhhcCCceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeC--CHHHHHHHHHhCCCc
Confidence 456665432111 1123599999999999999999 999 9999999999998 558888888653 34
Q ss_pred CcEEEEEEeCCC
Q psy1156 656 GSISLHICRRLK 667 (671)
Q Consensus 656 ~~VtL~V~Rr~~ 667 (671)
++|.|+|.|+.+
T Consensus 311 ~~v~l~v~R~g~ 322 (348)
T 3qo6_A 311 DEVTVEVLRGDH 322 (348)
T ss_dssp CEEEEEEECSSS
T ss_pred CEEEEEEEECCE
Confidence 689999999764
No 360
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.99 E-value=6.7e-06 Score=93.84 Aligned_cols=70 Identities=19% Similarity=0.339 Sum_probs=55.1
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCC
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRL 666 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~ 666 (671)
..||+.+.... .|++|..|.++|||+++| |++||+|++|||..|..... ..+|+.. +...|.|+|.|+.
T Consensus 485 ~~lG~~~~~~~------~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~~~l---~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 485 VNFGAKYKASP------QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATEQSV---KRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCCSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCTTTH---HHHHTTCCTTCEEEEEEEETT
T ss_pred cccceEEeccC------CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCHHHH---HHHHHhcCCCCEEEEEEEECC
Confidence 47888876432 379999999999999999 99999999999999964444 4445442 3468999999976
Q ss_pred C
Q psy1156 667 K 667 (671)
Q Consensus 667 ~ 667 (671)
+
T Consensus 555 ~ 555 (597)
T 4fgm_A 555 E 555 (597)
T ss_dssp E
T ss_pred E
Confidence 4
No 361
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.98 E-value=1.1e-05 Score=85.02 Aligned_cols=58 Identities=26% Similarity=0.443 Sum_probs=52.4
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.|++|.+|.++|||+++| |++||+|++|||++|. +..++..+|+. + ..|.|+|.|+.+
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~-~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-Q-SQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-C-SSEEEEEEETTE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-C-CeEEEEEEECCE
Confidence 589999999999999999 9999999999999998 67888888876 3 689999999754
No 362
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=97.97 E-value=8.9e-06 Score=69.35 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=49.0
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh-cCCCeEEEEEEeCCcc
Q psy1156 419 GFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS-SGPLNMDLLISRTSLK 480 (671)
Q Consensus 419 GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~-~~g~~V~L~V~R~~~~ 480 (671)
.++|..|.+++||+++| |++||+|++|||+.+.. ..++...+. ..+..+.|+|.|++..
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 46788999999999999 99999999999999975 466766666 3467899999997753
No 363
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.94 E-value=7.1e-06 Score=89.48 Aligned_cols=74 Identities=19% Similarity=0.339 Sum_probs=56.8
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.++||.+....+.. ....++|..|.++|||+++| |++||+|++|||++|.++. +..+|+. +...|.|.|.|...
T Consensus 74 ~G~~~~l~~~~~~~-~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~-~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 74 YGFDYTLYKVLDND-TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG-STRQLQIGVYKEVV 147 (403)
T ss_dssp CSEEEEEEECTTCS-SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC-SCEEEEEEEEEEEC
T ss_pred cceEEEEEEcCCCC-cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC-CCCEEEEEEEeCCc
Confidence 56777776443211 11247899999999999999 9999999999999998775 5566666 44679999988754
No 364
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.91 E-value=4e-06 Score=88.03 Aligned_cols=60 Identities=20% Similarity=0.324 Sum_probs=52.4
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEeCCcc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISRTSLK 480 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~~ 480 (671)
.|++|..|.+++||+++| |++||+|++|||+.+.. ..++..+|. ..+..+.|+|.|++..
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 689999999999999999 99999999999999975 466667776 3578999999998764
No 365
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.90 E-value=1.9e-05 Score=90.06 Aligned_cols=72 Identities=18% Similarity=0.183 Sum_probs=58.4
Q ss_pred CCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEe
Q psy1156 399 NEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISR 476 (671)
Q Consensus 399 ~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R 476 (671)
...||+.+.... .|++|..|.+||||+++| |++||+|++|||..|... +...++. ..+..|.|+|.|
T Consensus 484 ~~~lG~~~~~~~-------~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~~---~l~~~l~~~~~g~~v~l~v~R 552 (597)
T 4fgm_A 484 RVNFGAKYKASP-------QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATEQ---SVKRILERYIPGDTVTIHAFR 552 (597)
T ss_dssp SCCCSEEEEEET-------TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCTT---THHHHHTTCCTTCEEEEEEEE
T ss_pred ccccceEEeccC-------CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCHH---HHHHHHHhcCCCCEEEEEEEE
Confidence 468999887532 589999999999999999 999999999999999533 3444454 367899999999
Q ss_pred CCccc
Q psy1156 477 TSLKK 481 (671)
Q Consensus 477 ~~~~~ 481 (671)
++...
T Consensus 553 ~g~~~ 557 (597)
T 4fgm_A 553 RDELM 557 (597)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 87643
No 366
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.90 E-value=2e-05 Score=86.99 Aligned_cols=60 Identities=22% Similarity=0.286 Sum_probs=52.5
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||++|. +..++..+|... ....|.|+|.|+.+
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~V~R~g~ 342 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKIT--QATQVKTTISLLRVGSTVKIIVERDNK 342 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 9999999999999998 668888887753 34689999999764
No 367
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.87 E-value=2.1e-05 Score=82.62 Aligned_cols=73 Identities=16% Similarity=0.289 Sum_probs=56.8
Q ss_pred CcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEe-
Q psy1156 400 EELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISR- 476 (671)
Q Consensus 400 ~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R- 476 (671)
..||+.+..... . .|++|..|.+++||+++| |++||+|++|||+.+..+ .++...+. ..+..+.|+|.|
T Consensus 229 ~~lGi~~~~~~~-~----~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~ 300 (324)
T 1y8t_A 229 ASLGVQVTNDKD-T----LGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVALTFQDP 300 (324)
T ss_dssp EECCEEEESCSS-S----SSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEECS
T ss_pred cccceEeeeccC-C----CceEEEEECCCChHHHcC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEEC
Confidence 355666553211 1 689999999999999999 999999999999999754 55666665 357889999999
Q ss_pred CCcc
Q psy1156 477 TSLK 480 (671)
Q Consensus 477 ~~~~ 480 (671)
++..
T Consensus 301 ~g~~ 304 (324)
T 1y8t_A 301 SGGS 304 (324)
T ss_dssp SCCE
T ss_pred CCCE
Confidence 7653
No 368
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.85 E-value=2.3e-05 Score=85.98 Aligned_cols=60 Identities=28% Similarity=0.409 Sum_probs=51.6
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||++|. +..++..+|... ....|.|+|.|+.+
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGK 323 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 9999999999999998 567777777653 24689999998764
No 369
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.84 E-value=1.5e-05 Score=86.89 Aligned_cols=75 Identities=15% Similarity=0.274 Sum_probs=57.6
Q ss_pred CCcccEEEeeecCCCCCCcCcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCC
Q psy1156 399 NEELGIYIAKIKNSSEGNIGGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTS 478 (671)
Q Consensus 399 ~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~ 478 (671)
..++||.+....... .. ..++|..|.+||||+++| |++||+|++|||+.|.++. +..+++..+..|.|+|.|.+
T Consensus 73 ~~G~~~~l~~~~~~~-~~-~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g 146 (403)
T 3k50_A 73 SYGFDYTLYKVLDND-TA-YNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEV 146 (403)
T ss_dssp BCSEEEEEEECTTCS-SC-EEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEE
T ss_pred ccceEEEEEEcCCCC-cc-eeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCC
Confidence 356777766543211 00 148899999999999999 9999999999999998875 45566666778999999876
Q ss_pred c
Q psy1156 479 L 479 (671)
Q Consensus 479 ~ 479 (671)
.
T Consensus 147 ~ 147 (403)
T 3k50_A 147 V 147 (403)
T ss_dssp C
T ss_pred c
Confidence 5
No 370
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.76 E-value=3e-05 Score=82.49 Aligned_cols=61 Identities=28% Similarity=0.350 Sum_probs=52.5
Q ss_pred CcEEEEEEcCCChhhhcCCCCC-----------CCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEeCCccc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLEL-----------GDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISRTSLKK 481 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~-----------GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~~~ 481 (671)
.|++|..|.++|||+++| |++ ||+|++|||+.|.++ .++...|. ..+..|.|+|.|+++..
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 324 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKE 324 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEE
Confidence 689999999999999999 999 999999999999865 56666664 35789999999987643
No 371
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=97.63 E-value=5.1e-05 Score=69.62 Aligned_cols=57 Identities=25% Similarity=0.259 Sum_probs=48.6
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHh--cCCCeEEEEEEeCCc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIIS--SGPLNMDLLISRTSL 479 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~--~~g~~V~L~V~R~~~ 479 (671)
.|++|..|.+++||+++ |++||+|++|||+.+..+ .++...+. ..+..+.|+| |.+.
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 68999999999999988 999999999999999754 56666666 3577899999 8765
No 372
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.59 E-value=9e-06 Score=85.82 Aligned_cols=58 Identities=26% Similarity=0.448 Sum_probs=0.0
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||+++. ++.++..+|+. + ..|.|+|.|+.+
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~-~~v~l~v~R~g~ 311 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-E-STLNMVVRRGNE 311 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-C-CeEEEEEEECCE
Confidence 489999999999999999 9999999999999997 66778888875 3 679999998764
No 373
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.59 E-value=0.00011 Score=77.45 Aligned_cols=59 Identities=19% Similarity=0.370 Sum_probs=52.3
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCCcc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTSLK 480 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~~~ 480 (671)
.|++|..|.++|||+++| |++||+|++|||+.+.. ..+...+++. +..+.|+|.|++..
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~-~~~v~l~v~R~g~~ 314 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT-QSQLAVQIRRGRET 314 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT-CSSEEEEEEETTEE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC-CCeEEEEEEECCEE
Confidence 689999999999999999 99999999999999974 5677777874 67899999998764
No 374
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.39 E-value=4e-05 Score=84.47 Aligned_cols=60 Identities=28% Similarity=0.431 Sum_probs=51.1
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCHHHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTHLEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSheEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||+++| |++||+|++|||++|.. ..++..+|... ....|.|+|.|+.+
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 346 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISS--FAALRAQVGTMPVGSKLTLGLLRDGK 346 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCS--SHHHHHHTTSSBTTCCCEEEEESSSC
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 489999999999999999 99999999999999984 47777777652 24679999988754
No 375
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.27 E-value=4e-05 Score=80.89 Aligned_cols=60 Identities=23% Similarity=0.398 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccCCCHHHHHHHHhcCCCeEEEEEEeCCccc
Q psy1156 418 GGFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRGLTMTQAKSIISSGPLNMDLLISRTSLKK 481 (671)
Q Consensus 418 ~GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~~s~~~av~~L~~~g~~V~L~V~R~~~~~ 481 (671)
.|++|..|.++|||+++| |++||+|++|||+.+..+ .++..+++. +..+.|+|.|.++..
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~-~~~v~l~v~R~g~~~ 313 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSA--NDVSDVIKR-ESTLNMVVRRGNEDI 313 (332)
T ss_dssp ----------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhC-CCeEEEEEEECCEEE
Confidence 689999999999999999 999999999999999643 455566663 678999999987643
No 376
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.24 E-value=0.00043 Score=82.64 Aligned_cols=70 Identities=10% Similarity=0.045 Sum_probs=58.1
Q ss_pred CcccEEEecCCCCCCCCcceeEEEeCCC--------CHHhHhC-CCCCCCEEEEECCeecCCCCHHHHHHHHHhcCCCcE
Q psy1156 588 KGLGFTIVGGKDSPRGAIGIFIKSILDN--------GQAAEDG-RLKEGDEILAINGQVCHDLTHLEAISLFKTIKNGSI 658 (671)
Q Consensus 588 ~~LGfsL~Gg~ds~~g~~GVfIssV~pg--------SpAaraG-rLr~GDrILeVNG~sV~~lSheEAV~lLK~sg~~~V 658 (671)
.++|+.+.-.. .+++|..|.++ |||+++| .|+ ||+|++|||+++.++. +++.+|+......|
T Consensus 737 ~g~G~~~~~~~------~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v 807 (1045)
T 1k32_A 737 GRIACDFKLDG------DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSA 807 (1045)
T ss_dssp CBCSEEEEEET------TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEE
T ss_pred ceecEEEEEeC------CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEE
Confidence 57888886422 37899999998 9999999 499 9999999999998765 78888887655679
Q ss_pred EEEEEeCC
Q psy1156 659 SLHICRRL 666 (671)
Q Consensus 659 tL~V~Rr~ 666 (671)
.|+|.|..
T Consensus 808 ~l~v~r~~ 815 (1045)
T 1k32_A 808 RIRLSGKG 815 (1045)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99998865
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=96.87 E-value=0.0019 Score=77.14 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=57.7
Q ss_pred CCcccEEEeeecCCCCCCcCcEEEEEEcCC--------ChhhhcCC-CCCCCEEEccCCeeccCCCHHHHHHHHh-cCCC
Q psy1156 399 NEELGIYIAKIKNSSEGNIGGFVVAHIVSG--------GLAEKEGC-LELGDEIISVNGQRLRGLTMTQAKSIIS-SGPL 468 (671)
Q Consensus 399 ~~~LGfsI~gg~~~~~g~~~GI~Vs~V~pG--------spA~raG~-L~~GD~IlaVNG~~V~~~s~~~av~~L~-~~g~ 468 (671)
.+++|+.+.-.. .+++|..|.+| +||+++|. |+ ||+|++|||+.+.++. ++..+|+ ..+.
T Consensus 736 ~~g~G~~~~~~~-------~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~ 805 (1045)
T 1k32_A 736 SGRIACDFKLDG-------DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGT 805 (1045)
T ss_dssp CCBCSEEEEEET-------TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTS
T ss_pred cceecEEEEEeC-------CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCC
Confidence 358898886432 67999999998 99999994 88 9999999999998875 5566666 5578
Q ss_pred eEEEEEEeCC
Q psy1156 469 NMDLLISRTS 478 (671)
Q Consensus 469 ~V~L~V~R~~ 478 (671)
.|.|+|.|.+
T Consensus 806 ~v~l~v~r~~ 815 (1045)
T 1k32_A 806 SARIRLSGKG 815 (1045)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEECCC
Confidence 9999999976
No 378
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.76 E-value=0.0025 Score=71.89 Aligned_cols=61 Identities=18% Similarity=0.207 Sum_probs=45.9
Q ss_pred cceeEEEeCCCCHHhHhCCCCCCCEEEEECCeecCCCCH--------HHHHHHHHhc-CCCcEEEEEEeCCC
Q psy1156 605 IGIFIKSILDNGQAAEDGRLKEGDEILAINGQVCHDLTH--------LEAISLFKTI-KNGSISLHICRRLK 667 (671)
Q Consensus 605 ~GVfIssV~pgSpAaraGrLr~GDrILeVNG~sV~~lSh--------eEAV~lLK~s-g~~~VtL~V~Rr~~ 667 (671)
.|++|..|.++|||++ + |++||+|++|||+.|..... .....++... +.++|.|+|.|+.+
T Consensus 277 ~Gv~V~~V~~~spA~~-a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk 346 (539)
T 4fln_A 277 EGVLVRRVEPTSDASK-V-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGE 346 (539)
T ss_dssp BCEEEEEECTTSGGGG-T-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTE
T ss_pred CceeeecccCCChHHh-C-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCE
Confidence 5999999999999985 5 99999999999999954221 1122333332 34789999999875
No 379
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=27.56 E-value=57 Score=36.98 Aligned_cols=28 Identities=21% Similarity=0.546 Sum_probs=21.6
Q ss_pred eeEEEeCCCCHHhHhCCCCCCCEEEEECCeecC
Q psy1156 607 IFIKSILDNGQAAEDGRLKEGDEILAINGQVCH 639 (671)
Q Consensus 607 VfIssV~pgSpAaraGrLr~GDrILeVNG~sV~ 639 (671)
+||..+..... + +..||+|++|||+++.
T Consensus 98 i~V~dv~~~~s----~-I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 98 FYFVDIMTFSS----E-IRVGDELLEVDGAPVQ 125 (583)
T ss_dssp EEEEEECSSCC----S-SCTTCEEEEETTEEHH
T ss_pred EEEEecccccc----C-CCCCCEEEEECCccHH
Confidence 67777643322 4 9999999999999984
No 380
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=20.25 E-value=1e+02 Score=34.96 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=22.4
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEccCCeeccC
Q psy1156 419 GFVVAHIVSGGLAEKEGCLELGDEIISVNGQRLRG 453 (671)
Q Consensus 419 GI~Vs~V~pGspA~raG~L~~GD~IlaVNG~~V~~ 453 (671)
.++|..+..... + +.+||+|++|||+++..
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEHHH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccHHH
Confidence 477776633322 5 99999999999998853
Done!