Query psy11568
Match_columns 116
No_of_seqs 103 out of 1488
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 21:49:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fa8_A Secreted protein BARF1; 99.7 1.9E-17 6.7E-22 101.5 7.5 72 28-116 70-142 (203)
2 2wv3_A Neuroplastin; igcam, me 99.7 2.6E-16 8.8E-21 94.7 11.0 92 2-115 35-127 (190)
3 3kld_A Contactin 4, axcam, BIG 99.7 2E-16 6.8E-21 104.6 11.0 96 1-115 234-330 (384)
4 2c5d_C AXL oncogene, tyrosine- 99.7 4.3E-16 1.5E-20 94.0 11.1 96 2-115 33-142 (195)
5 1rhf_A Tyrosine-protein kinase 99.7 7.4E-16 2.5E-20 92.0 12.0 96 2-115 32-134 (182)
6 3b43_A Titin; I-SET IG fold, e 99.7 4.5E-16 1.5E-20 107.5 12.3 97 1-115 320-419 (570)
7 2r15_A Myomesin-1; sarcomeric 99.7 7E-16 2.4E-20 93.9 11.9 107 2-115 33-152 (212)
8 3rbs_A Myomesin-1; immunoglobu 99.7 1.8E-15 6.2E-20 92.9 13.3 103 1-115 32-152 (207)
9 2rik_A Titin; I-SET IG fold, p 99.7 3E-15 1E-19 94.8 14.4 97 2-115 35-134 (284)
10 2rik_A Titin; I-SET IG fold, p 99.7 2.4E-15 8.2E-20 95.3 13.1 98 1-116 128-228 (284)
11 3b43_A Titin; I-SET IG fold, e 99.7 5.7E-16 2E-20 107.0 10.7 97 1-115 413-512 (570)
12 2a38_A Titin; Z1Z2, structural 99.7 1.6E-15 5.5E-20 91.2 11.2 99 2-115 35-138 (194)
13 2iep_A Muscle-specific kinase 99.7 2.6E-15 8.8E-20 90.1 11.5 96 2-115 37-135 (192)
14 2va4_A NCAM2, N-CAM 2, neural 99.7 2.9E-15 1E-19 89.8 11.4 95 2-115 34-129 (192)
15 3p3y_A Neurofascin; IG domains 99.7 1.8E-15 6E-20 99.9 11.2 96 1-115 251-347 (404)
16 2v44_A NCAM2, neural cell adhe 99.7 8E-15 2.7E-19 87.9 13.1 97 2-115 31-131 (189)
17 2yd6_A PTPRD protein; hydrolas 99.7 6.7E-15 2.3E-19 90.0 12.9 104 1-115 35-143 (212)
18 3lcy_A Titin; A-BAND, IG tande 99.6 7.1E-15 2.4E-19 88.4 12.2 97 2-115 37-138 (197)
19 3ojm_B Fibroblast growth facto 99.6 7E-15 2.4E-19 90.4 12.3 101 2-115 49-153 (231)
20 3laf_A Deleted in colorectal c 99.6 2.8E-15 9.5E-20 99.0 11.1 97 1-115 250-347 (403)
21 1epf_A NCAM, protein (neural c 99.6 7.4E-15 2.5E-19 88.1 11.9 96 2-115 33-135 (191)
22 2j8h_A Titin, connectin; cardi 99.6 5.7E-15 2E-19 89.0 11.2 101 2-115 34-139 (197)
23 2yd1_A Tyrosine-protein phosph 99.6 1.6E-14 5.6E-19 88.2 13.2 103 2-115 36-145 (212)
24 3grw_A Fibroblast growth facto 99.6 1.5E-14 5.2E-19 89.6 12.6 101 2-115 45-149 (241)
25 2v5m_A Dscam; neurobiology SPL 99.6 4.6E-15 1.6E-19 97.6 10.5 98 1-116 241-343 (388)
26 2jll_A NCAM2, neural cell adhe 99.6 1E-14 3.5E-19 96.0 12.0 97 1-115 29-135 (389)
27 1bih_A Hemolin; insect immunit 99.6 5.5E-15 1.9E-19 97.3 10.4 97 2-115 242-344 (395)
28 1itb_B Type 1 interleukin-1 re 99.6 6.2E-15 2.1E-19 94.7 10.2 102 2-116 139-245 (315)
29 1e07_A Carcinoembryonic antige 99.6 7.4E-15 2.5E-19 102.4 10.7 99 1-116 495-595 (642)
30 2y23_A Myomesin; structural pr 99.6 4.2E-15 1.4E-19 95.1 8.1 107 1-115 31-143 (312)
31 2yd9_A Receptor-type tyrosine- 99.6 1.2E-14 4.2E-19 93.0 10.1 100 1-115 137-240 (304)
32 1qz1_A Neural cell adhesion mo 99.6 3.8E-14 1.3E-18 89.9 12.3 97 2-115 33-135 (291)
33 2v5t_A NCAM2, N-CAM 2, neural 99.6 2.2E-14 7.5E-19 85.8 10.4 97 2-115 32-133 (189)
34 2yd9_A Receptor-type tyrosine- 99.6 3.8E-14 1.3E-18 90.7 11.6 103 1-115 35-143 (304)
35 3qs7_E FL cytokine receptor; i 99.6 5.8E-15 2E-19 99.1 7.9 96 2-116 258-362 (423)
36 3oq3_B IFN-alpha/beta binding 99.6 9E-14 3.1E-18 90.1 13.2 99 2-116 159-268 (329)
37 1f97_A Junction adhesion molec 99.6 2.1E-14 7.3E-19 87.1 9.6 96 2-115 31-140 (212)
38 3k0w_A Mucosa-associated lymph 99.6 1E-13 3.5E-18 85.2 12.4 99 2-115 48-153 (218)
39 1hng_A CD2; T lymphocyte adhes 99.6 8.4E-14 2.9E-18 83.3 11.7 92 2-116 28-131 (176)
40 1cs6_A Axonin-1; neural cell a 99.6 2.3E-14 7.9E-19 94.2 9.9 92 2-115 237-329 (382)
41 3s97_C Contactin-1; carbonic a 99.6 1.4E-14 4.8E-19 87.3 8.2 103 2-115 40-148 (201)
42 3kld_A Contactin 4, axcam, BIG 99.6 7.3E-14 2.5E-18 92.3 12.1 103 2-115 133-240 (384)
43 2y25_A Myomesin; structural pr 99.6 8E-14 2.7E-18 89.3 11.8 107 2-115 138-257 (317)
44 2vr9_A Roundabout 1, ROBO; imm 99.6 3.2E-14 1.1E-18 87.0 9.4 97 2-115 39-144 (217)
45 1e07_A Carcinoembryonic antige 99.6 4.2E-14 1.4E-18 98.6 10.8 97 2-116 318-417 (642)
46 2wim_A N-CAM 2, NCAM2, neural 99.6 1.1E-13 3.6E-18 87.9 11.8 98 2-116 33-134 (291)
47 3dmk_A DOWN syndrome cell adhe 99.6 4.8E-14 1.6E-18 100.5 11.2 96 2-115 650-749 (816)
48 1ry7_B FGFR-3, fibroblast grow 99.5 2E-14 6.9E-19 92.9 8.2 101 2-115 153-257 (334)
49 1qz1_A Neural cell adhesion mo 99.5 3.1E-14 1E-18 90.4 8.8 99 1-116 129-232 (291)
50 2nzi_A Titin; IG-domain, FNIII 99.5 6.8E-14 2.3E-18 89.4 10.0 102 1-115 33-139 (305)
51 1cs6_A Axonin-1; neural cell a 99.5 4.1E-14 1.4E-18 93.0 9.0 98 1-115 36-137 (382)
52 1hnf_A CD2; T lymphocyte adhes 99.5 2.1E-13 7.1E-18 82.3 11.1 92 2-116 31-136 (182)
53 4dep_C Interleukin-1 receptor 99.5 4.9E-14 1.7E-18 91.7 8.8 103 1-116 154-266 (349)
54 2v5m_A Dscam; neurobiology SPL 99.5 8.8E-14 3E-18 91.5 10.0 103 1-115 33-141 (388)
55 3bp6_B Programmed cell death 1 99.5 1.5E-13 5E-18 83.3 9.9 96 2-116 37-139 (202)
56 2wim_A N-CAM 2, NCAM2, neural 99.5 1E-13 3.6E-18 87.9 9.6 99 1-116 127-230 (291)
57 3qs9_E FL cytokine receptor; i 99.5 6.8E-14 2.3E-18 96.3 9.2 88 1-116 355-443 (527)
58 2o26_X MAST/stem cell growth f 99.5 7.9E-14 2.7E-18 88.6 8.9 100 2-116 121-225 (290)
59 1nbq_A JAM, junctional adhesio 99.5 5.3E-14 1.8E-18 85.2 7.4 96 2-115 34-143 (209)
60 2v9r_A Roundabout homolog 1; p 99.5 3.1E-13 1E-17 82.1 10.8 102 2-115 39-147 (212)
61 3jz7_A MCAR, CAR, coxsackievir 99.5 1.2E-13 4.1E-18 83.9 8.9 72 27-115 84-157 (214)
62 2fbo_J V1V2;, variable region- 99.5 1E-13 3.5E-18 86.2 8.6 76 27-115 90-171 (250)
63 2x1w_L Vascular endothelial gr 99.5 2.9E-13 9.9E-18 82.9 10.4 99 2-116 38-143 (213)
64 3sbw_C Programmed cell death 1 99.5 3E-13 1E-17 82.8 10.0 70 28-115 81-151 (222)
65 3p3y_A Neurofascin; IG domains 99.5 1.9E-13 6.6E-18 90.1 9.7 99 1-116 46-153 (404)
66 3qs7_E FL cytokine receptor; i 99.5 1.7E-13 5.8E-18 92.0 9.1 94 1-115 77-174 (423)
67 3qs9_E FL cytokine receptor; i 99.5 8E-14 2.7E-18 95.9 7.6 96 1-115 257-361 (527)
68 3laf_A Deleted in colorectal c 99.5 6.5E-13 2.2E-17 87.6 11.4 101 2-115 52-156 (403)
69 3b5h_A Cervical EMMPRIN, HAB18 99.5 4.8E-13 1.7E-17 79.9 9.8 88 3-115 31-119 (184)
70 2d3v_A Leukocyte immunoglobuli 99.5 1.2E-13 4E-18 83.6 7.1 97 2-115 33-133 (196)
71 3oq3_B IFN-alpha/beta binding 99.5 1.7E-13 5.7E-18 88.9 7.1 94 2-115 68-164 (329)
72 1uct_A Immunoglobulin alpha FC 99.5 7.2E-13 2.5E-17 81.8 9.3 98 2-115 37-140 (218)
73 4dep_C Interleukin-1 receptor 99.5 1E-12 3.5E-17 85.5 10.4 100 2-115 48-160 (349)
74 2ec8_A MAST/stem cell growth f 99.4 8.7E-13 3E-17 90.1 10.5 97 3-116 243-350 (524)
75 1vca_A VCAM-D1,2, human vascul 99.4 4.1E-13 1.4E-17 81.9 7.9 93 2-115 31-129 (202)
76 1bih_A Hemolin; insect immunit 99.4 9E-14 3.1E-18 91.5 5.1 96 2-115 37-136 (395)
77 3p2t_A Leukocyte immunoglobuli 99.4 3.9E-13 1.3E-17 81.3 7.5 97 2-115 33-133 (196)
78 3o4o_C Interleukin-1 receptor 99.4 1.3E-13 4.5E-18 89.3 5.5 97 2-115 55-160 (339)
79 2if7_A SLAM family member 6; N 99.4 3.3E-12 1.1E-16 77.3 11.1 97 2-115 29-145 (193)
80 3ejj_X Macrophage colony-stimu 99.4 1.6E-12 5.6E-17 82.3 10.1 99 3-115 121-222 (289)
81 4fom_A Poliovirus receptor-rel 99.4 1.4E-13 4.8E-18 88.2 4.9 100 1-115 144-248 (308)
82 1ry7_B FGFR-3, fibroblast grow 99.4 7.6E-14 2.6E-18 90.2 3.5 104 2-116 39-159 (334)
83 3o4o_C Interleukin-1 receptor 99.4 4.1E-13 1.4E-17 87.0 6.8 101 2-116 155-266 (339)
84 1jbj_A CD3 epsilon and gamma e 99.4 6.6E-13 2.3E-17 80.0 7.2 96 2-115 27-139 (186)
85 3sgj_C Human FCG3A receptor; r 99.4 2.3E-12 7.8E-17 78.7 9.7 84 4-115 40-124 (204)
86 4fqp_A Poliovirus receptor; im 99.4 4.6E-13 1.6E-17 86.1 6.8 99 1-115 147-253 (313)
87 2xot_A Amphoterin-induced prot 99.4 1.1E-12 3.8E-17 86.4 8.8 84 1-113 274-360 (361)
88 1ugn_A LIR1, leukocyte immunog 99.4 7.8E-13 2.7E-17 80.1 7.1 97 2-115 33-134 (198)
89 1itb_B Type 1 interleukin-1 re 99.4 1.2E-13 4E-18 88.7 3.4 98 2-115 36-144 (315)
90 2o26_X MAST/stem cell growth f 99.4 2.4E-12 8.1E-17 81.8 9.4 87 3-115 39-126 (290)
91 3u83_A Poliovirus receptor-rel 99.4 9.3E-13 3.2E-17 84.9 7.6 72 28-115 195-268 (331)
92 3knb_B Obscurin-like protein 1 99.4 1.5E-12 5E-17 72.2 7.3 61 1-68 42-105 (107)
93 2gi7_A GPVI protein; IG-like d 99.4 2E-12 6.7E-17 77.6 8.3 89 2-115 36-127 (184)
94 1dr9_A B7-1 (CD80), T lymphocy 99.4 2.7E-12 9.4E-17 77.6 9.1 95 2-115 28-142 (201)
95 3dmk_A DOWN syndrome cell adhe 99.4 3.6E-12 1.2E-16 91.0 10.7 97 1-115 277-378 (816)
96 3r4d_A CEA-related cell adhesi 99.4 1.5E-11 5.2E-16 74.5 11.9 74 25-115 69-144 (208)
97 2rcj_C Light chain; immunoglob 99.4 2.5E-12 8.6E-17 87.8 8.8 97 2-116 250-359 (523)
98 3rjd_A High affinity immunoglo 99.4 6.5E-12 2.2E-16 78.4 10.0 91 2-114 113-205 (262)
99 2ec8_A MAST/stem cell growth f 99.4 3.1E-12 1E-16 87.4 9.2 99 2-115 144-247 (524)
100 3nl4_L Antigen binding fragmen 99.4 3.1E-12 1E-16 78.0 8.3 74 28-115 72-150 (213)
101 1ccz_A Protein (CD58); LFA-3, 99.4 1E-11 3.4E-16 74.0 10.3 90 2-115 24-125 (171)
102 1sy6_A T-cell surface glycopro 99.4 3.3E-12 1.1E-16 78.0 8.3 97 1-115 29-146 (204)
103 1fnl_A Low affinity immunoglob 99.4 6.8E-12 2.3E-16 74.6 9.3 84 4-115 40-124 (175)
104 2p1y_A Bispecific alpha/beta T 99.4 1.4E-11 4.9E-16 76.2 11.1 80 28-115 74-162 (238)
105 3knb_A Titin; IG-like, titin, 99.4 4E-12 1.4E-16 69.6 7.5 60 1-67 34-98 (100)
106 1oll_A NK receptor; immune sys 99.4 4.3E-12 1.5E-16 76.4 8.2 97 2-115 32-132 (188)
107 2pet_A Lutheran blood group gl 99.4 3.7E-12 1.2E-16 78.3 7.9 76 26-115 76-155 (231)
108 2y25_A Myomesin; structural pr 99.4 3.4E-14 1.2E-18 91.0 -1.3 96 2-115 37-143 (317)
109 3uzq_A Anti-dengue MAB 4E11; d 99.3 2.1E-11 7.3E-16 76.3 11.0 80 28-115 81-172 (253)
110 2y23_A Myomesin; structural pr 99.3 1.6E-11 5.5E-16 78.4 10.5 104 1-115 137-257 (312)
111 2ny1_B T-cell surface glycopro 99.3 1.2E-11 4.1E-16 73.9 9.2 65 28-116 69-133 (184)
112 1he7_A High affinity nerve gro 99.3 3.7E-12 1.3E-16 72.5 6.4 59 1-66 29-97 (126)
113 1nkr_A P58-CL42 KIR; inhibitor 99.3 7E-12 2.4E-16 76.1 8.0 97 2-115 36-141 (201)
114 1nqb_A Single-chain antibody f 99.3 1.5E-11 5.1E-16 77.4 9.7 71 28-115 80-161 (256)
115 2ghw_B Anti-SARS SCFV antibody 99.3 3.3E-11 1.1E-15 75.0 11.1 80 28-115 82-170 (247)
116 1qgc_4 Protein (immunoglobulin 99.3 2.8E-12 9.6E-17 85.6 6.6 96 3-115 149-255 (438)
117 3rjd_A High affinity immunoglo 99.3 1.4E-11 4.8E-16 76.9 9.4 85 3-115 33-118 (262)
118 1f2q_A High affinity immunoglo 99.3 7.3E-12 2.5E-16 74.4 7.6 85 3-115 36-121 (176)
119 2wng_A Tyrosine-protein phosph 99.3 4.8E-12 1.6E-16 81.8 7.3 73 27-115 74-154 (327)
120 3mj6_A Junctional adhesion mol 99.3 1.8E-11 6E-16 76.9 9.5 69 27-115 84-156 (268)
121 1wio_A CD4, T-cell surface gly 99.3 1.3E-11 4.4E-16 80.8 9.1 84 2-116 211-319 (363)
122 3ry4_A Low affinity immunoglob 99.3 1.3E-11 4.4E-16 72.7 8.3 86 2-115 35-121 (170)
123 4i0k_A CD276 antigen; immunogl 99.3 3.7E-12 1.3E-16 78.0 6.1 76 26-116 71-147 (222)
124 1wio_A CD4, T-cell surface gly 99.3 7.7E-12 2.6E-16 81.9 7.9 86 1-115 125-216 (363)
125 4frw_A Poliovirus receptor-rel 99.3 1.3E-11 4.3E-16 74.8 8.3 73 27-115 79-153 (218)
126 2ifg_A High affinity nerve gro 99.3 1.6E-13 5.4E-18 89.7 -0.2 92 2-115 188-281 (347)
127 3mj8_L Stimulatory hamster ant 99.3 1.8E-11 6E-16 74.6 8.9 75 28-115 71-151 (213)
128 1moe_A Anti-CEA MAB T84.66; an 99.3 3.1E-11 1.1E-15 74.8 10.1 77 28-115 76-156 (240)
129 3eow_R Poliovirus receptor; im 99.3 3.4E-12 1.2E-16 78.3 5.7 72 26-115 77-152 (221)
130 3tv3_L PGT128 light chain, IG 99.3 6.1E-12 2.1E-16 76.6 6.8 75 28-115 69-148 (211)
131 4dkd_C Macrophage colony-stimu 99.3 4.7E-12 1.6E-16 80.3 6.4 99 2-115 120-222 (292)
132 3umt_A SCFV heavy chain and li 99.3 4.2E-11 1.4E-15 75.1 10.6 80 28-115 82-173 (256)
133 3o3u_N Maltose-binding peripla 99.3 2.5E-11 8.4E-16 83.9 10.0 97 2-115 397-508 (581)
134 1gsm_A Madcam-1, mucosal addre 99.3 2.1E-11 7.1E-16 75.1 8.6 90 3-115 39-134 (210)
135 1f3r_B FV antibody fragment; I 99.3 7.8E-12 2.7E-16 78.6 6.9 80 28-115 79-174 (257)
136 2ocw_A Polymeric-immunoglobuli 99.3 3.6E-11 1.2E-15 82.9 10.7 71 28-115 76-148 (585)
137 1z7z_I Intercellular adhesion 99.3 2.2E-12 7.5E-17 86.5 4.6 89 2-115 311-405 (450)
138 3ejj_X Macrophage colony-stimu 99.3 8E-12 2.7E-16 79.1 6.8 93 3-115 31-125 (289)
139 1qok_A MFE-23 recombinant anti 99.3 5.2E-11 1.8E-15 75.8 10.5 79 28-115 106-196 (282)
140 4f80_A Butyrophilin subfamily 99.3 7.1E-11 2.4E-15 72.7 10.6 70 28-115 84-154 (226)
141 2eo9_A Roundabout homolog 1; b 99.3 1.5E-11 5.1E-16 68.8 6.7 60 2-68 38-98 (118)
142 3esu_F Antibody 14B7* light ch 99.3 7.3E-11 2.5E-15 73.6 10.4 81 28-115 75-168 (250)
143 1c1e_H Catalytic antibody 1E9 99.3 1.4E-11 4.9E-16 75.4 7.0 76 27-115 79-161 (219)
144 1z7z_I Intercellular adhesion 99.3 2.4E-11 8.3E-16 81.4 8.6 101 3-115 120-226 (450)
145 2rcj_C Light chain; immunoglob 99.3 1.6E-11 5.4E-16 83.8 7.7 101 2-116 353-463 (523)
146 2oz4_A Intercellular adhesion 99.3 6.7E-12 2.3E-16 79.0 5.4 91 1-116 125-221 (265)
147 3u83_A Poliovirus receptor-rel 99.3 1.1E-10 3.8E-15 75.2 11.1 74 26-115 91-171 (331)
148 3d9a_L Light chain of hyhel10 99.3 2.9E-11 9.8E-16 73.6 7.9 74 28-115 72-149 (213)
149 3d9a_H Heavy chain of hyhel10 99.3 1.6E-11 5.4E-16 74.8 6.6 75 28-115 79-155 (210)
150 1q0x_L FAB 9B1, light chain; a 99.3 2.1E-11 7.1E-16 74.3 7.1 75 28-115 74-152 (212)
151 1svz_A Immunoglobulin;, single 99.3 1.6E-10 5.6E-15 71.9 11.3 80 28-115 77-164 (247)
152 1lk3_L 9D7 light chain; antige 99.2 4E-11 1.4E-15 73.0 8.1 74 28-115 71-148 (210)
153 2oz4_A Intercellular adhesion 99.2 1.1E-10 3.6E-15 73.5 10.2 88 3-114 37-130 (265)
154 3gkz_A Anti-methamphetamine si 99.2 1.4E-10 4.9E-15 72.6 10.7 81 28-115 87-177 (257)
155 3r06_A Anti-mouse CD3epsilon a 99.2 2.5E-11 8.7E-16 73.9 7.0 74 28-115 72-149 (213)
156 3vh8_G Killer cell immunoglobu 99.2 8.1E-11 2.8E-15 75.7 9.6 97 2-115 147-252 (316)
157 2ocw_A Polymeric-immunoglobuli 99.2 8.8E-11 3E-15 81.0 10.3 70 29-116 408-482 (585)
158 3omz_A Human vdelta1 gamma del 99.2 1.4E-10 4.8E-15 72.8 10.5 80 28-115 80-172 (259)
159 2zg1_A Sialic acid-binding IG- 99.2 2.9E-10 1E-14 69.1 11.5 72 28-116 83-163 (214)
160 3auv_A SC-DSFV derived from th 99.2 1.9E-10 6.5E-15 73.0 10.9 80 28-115 83-171 (276)
161 1wwb_X Protein (brain derived 99.2 4.7E-11 1.6E-15 65.5 7.1 60 1-67 30-97 (103)
162 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.2 4.5E-10 1.5E-14 70.5 12.5 79 28-115 77-171 (256)
163 2rgs_A I, IG gamma-2B heavy ch 99.2 1.1E-11 3.7E-16 76.3 5.0 100 2-115 45-154 (218)
164 2lu7_A Obscurin-like protein 1 99.2 3.2E-11 1.1E-15 64.0 6.2 49 1-56 24-74 (84)
165 3juy_B 3B3 single chain varian 99.2 2.1E-10 7.3E-15 71.8 10.8 80 28-115 86-185 (256)
166 4hwu_A Fibroblast growth facto 99.2 9.5E-11 3.3E-15 63.1 8.0 59 1-68 28-87 (95)
167 2bk8_A Connectin, M1, titin he 99.2 1.2E-10 4E-15 62.9 8.4 59 1-66 31-92 (97)
168 2dru_A Chimera of CD48 antigen 99.2 2.9E-10 9.8E-15 68.2 10.5 67 25-115 67-135 (180)
169 2ckn_A Basic fibroblast growth 99.2 8.2E-11 2.8E-15 63.4 7.2 56 1-65 37-93 (95)
170 3v2a_R Vascular endothelial gr 99.2 3.1E-11 1.1E-15 85.4 7.0 97 2-115 256-365 (772)
171 2znx_A SCFV; fluorotryptohpan, 99.2 1.6E-10 5.6E-15 71.9 9.5 80 28-115 72-159 (242)
172 3qp3_A Titin; I-SET IG-like, s 99.2 1.5E-10 5.3E-15 63.0 8.3 61 1-68 37-100 (103)
173 1wit_A Twitchin 18TH IGSF modu 99.2 3.4E-11 1.2E-15 64.7 5.5 56 1-65 31-91 (93)
174 3s96_B 3B5H10 FAB light chain; 99.2 6.8E-11 2.3E-15 72.1 7.5 75 28-115 76-158 (218)
175 2edj_A Roundabout homolog 2; K 99.2 7.3E-11 2.5E-15 64.0 6.9 61 1-68 37-98 (100)
176 4fom_A Poliovirus receptor-rel 99.2 2E-10 6.7E-15 73.5 9.8 75 27-116 74-151 (308)
177 3puc_A Titin; I-SET IG-like do 99.2 1.9E-10 6.4E-15 62.1 8.3 60 1-67 35-97 (99)
178 2yuz_A Myosin-binding protein 99.2 1E-10 3.5E-15 63.9 7.3 60 1-68 34-95 (100)
179 1pz5_B Heavy chain of FAB (SYA 99.2 9.5E-11 3.2E-15 71.8 7.9 75 28-115 82-162 (220)
180 2kdg_A Myotilin; immonoglobuli 99.2 2E-10 6.7E-15 62.2 8.3 60 1-67 34-97 (100)
181 1g1c_A Immunoglobulin-like dom 99.2 1.5E-10 5.2E-15 62.5 7.8 60 1-67 34-97 (99)
182 2gjj_A A21 single-chain antibo 99.2 7.3E-10 2.5E-14 70.0 11.9 81 28-115 82-175 (264)
183 3sob_L Antibody light chain; b 99.2 5E-11 1.7E-15 73.5 6.3 74 28-115 95-172 (237)
184 3mjg_X Beta-type platelet-deri 99.2 4.8E-11 1.6E-15 75.7 6.3 94 4-115 28-129 (289)
185 2vol_A Murine IGG FC; FC, zinc 99.2 1.7E-11 5.8E-16 74.8 4.0 99 3-115 38-146 (207)
186 3vh8_G Killer cell immunoglobu 99.2 1.3E-10 4.6E-15 74.7 8.4 95 2-115 52-152 (316)
187 1x9q_A SCFV, 4M5.3 anti-fluore 99.2 4.1E-10 1.4E-14 71.1 10.4 80 28-115 91-188 (268)
188 1za6_B IGG heavy chain; immuno 99.2 3E-11 1E-15 78.8 5.2 75 28-115 80-157 (344)
189 1igt_B IGG2A intact antibody - 99.2 2.8E-11 9.4E-16 81.2 5.1 100 2-115 274-383 (444)
190 2e7c_A Myosin-binding protein 99.2 3.7E-10 1.3E-14 63.1 8.9 60 1-68 53-115 (118)
191 3mjg_X Beta-type platelet-deri 99.2 2.2E-10 7.5E-15 72.6 8.8 63 44-115 152-216 (289)
192 1u2h_A APEG-1, aortic preferen 99.2 2.3E-10 7.9E-15 61.8 7.6 59 1-66 34-96 (99)
193 2xzc_L FAB A.17 light chain; i 99.2 9.7E-11 3.3E-15 71.5 6.7 74 28-115 73-151 (216)
194 1wwc_A Protein (NT-3 growth fa 99.2 8.5E-11 2.9E-15 65.8 5.9 54 1-61 34-93 (118)
195 3kvq_A Vascular endothelial gr 99.2 1E-10 3.5E-15 64.2 6.1 60 2-68 40-100 (108)
196 1p6f_A NKP46, natural cytotoxi 99.2 2.6E-10 8.8E-15 71.5 8.6 97 2-115 35-135 (242)
197 3pv7_A B7-H6, IG-like domain-c 99.2 2.8E-10 9.4E-15 70.9 8.7 70 28-115 83-155 (248)
198 4dzb_B Vbeta2 (MAIT T cell rec 99.2 4.9E-11 1.7E-15 74.2 5.3 78 28-115 78-162 (246)
199 2wng_A Tyrosine-protein phosph 99.2 3.3E-11 1.1E-15 77.8 4.6 96 3-115 150-257 (327)
200 3ux9_B SCFV antibody; five hel 99.1 1.1E-09 3.8E-14 68.5 11.4 81 28-115 75-171 (256)
201 2cqv_A MLCK, myosin light chai 99.1 3.2E-10 1.1E-14 63.0 8.0 61 1-68 36-99 (114)
202 1q9r_B S25-2 FAB (IGG1K) heavy 99.1 2.1E-10 7.2E-15 70.4 7.8 75 28-115 82-164 (222)
203 2c1o_A IGK-C protein; FAB frag 99.1 1E-10 3.6E-15 73.0 6.5 74 28-115 114-191 (254)
204 1qgc_4 Protein (immunoglobulin 99.1 1.5E-10 5E-15 77.2 7.5 75 28-115 298-380 (438)
205 3pl6_D MBP peptide / T-cell re 99.1 1.1E-10 3.9E-15 73.5 6.5 78 28-115 101-183 (268)
206 1gxe_A Myosin binding protein 99.1 3.2E-10 1.1E-14 65.5 7.7 33 28-66 104-137 (139)
207 3irg_B Obscurin-like protein 1 99.1 3.2E-10 1.1E-14 62.1 7.3 60 2-68 43-105 (107)
208 3irg_A Titin; IG-like, titin, 99.1 2.7E-10 9.3E-15 61.5 7.0 59 1-66 34-97 (100)
209 1nfd_E H57 FAB; complex (immun 99.1 1.2E-10 4.2E-15 70.8 6.0 75 28-115 70-150 (212)
210 3bae_H WO2 IGG2A FAB fragment 99.1 5.6E-10 1.9E-14 68.9 9.0 76 27-115 80-167 (228)
211 2lvc_A Obscurin-like protein 1 99.1 3.6E-11 1.2E-15 64.8 3.1 49 1-56 34-84 (91)
212 1waa_A Titin; metal binding pr 99.1 2.8E-10 9.6E-15 61.4 6.7 48 2-56 34-83 (93)
213 4ei6_B Vbeta16 XV19 type II na 99.1 2.9E-10 1E-14 70.6 7.7 78 28-115 77-161 (245)
214 3caf_A Fibroblast growth facto 99.1 4.4E-10 1.5E-14 60.8 7.3 54 1-61 37-93 (100)
215 1b6u_A KIR2DL3, P58 killer cel 99.1 1.8E-10 6.3E-15 72.8 6.5 97 2-115 35-140 (257)
216 4fmk_A Poliovirus receptor-rel 99.1 3.4E-10 1.2E-14 68.7 7.5 72 27-115 83-157 (225)
217 3bkj_L WO2 IGG2A FAB fragment 99.1 1.9E-10 6.3E-15 72.0 6.3 74 28-115 110-187 (252)
218 2cr3_A Basic fibroblast growth 99.1 2.9E-10 9.8E-15 61.8 6.3 52 1-61 31-82 (99)
219 4dkd_C Macrophage colony-stimu 99.1 2.4E-11 8.1E-16 77.0 1.8 71 28-115 52-125 (292)
220 1op3_H FAB 2G12, heavy chain; 99.1 3.5E-10 1.2E-14 69.7 7.0 76 28-116 80-166 (225)
221 1c5d_H Monoclonal antibody aga 99.1 8E-10 2.7E-14 67.7 8.6 75 28-115 79-159 (215)
222 3rbs_A Myomesin-1; immunoglobu 99.1 8.4E-11 2.9E-15 72.0 4.1 52 1-61 146-199 (207)
223 2kkq_A Myotilin; unknown funct 99.1 8.2E-10 2.8E-14 61.7 7.6 61 1-68 44-109 (116)
224 1bec_A 14.3.D T cell antigen r 99.1 6.3E-10 2.2E-14 69.1 7.8 78 28-115 73-158 (238)
225 1hzh_H IGG, immunoglobulin hea 99.1 9.8E-11 3.4E-15 78.8 4.1 105 2-115 164-288 (457)
226 1fhg_A Telokin; immunoglobulin 99.1 1.2E-09 4.3E-14 63.8 8.4 62 1-69 70-135 (154)
227 2wqr_A IG epsilon chain C regi 99.1 1.4E-10 4.8E-15 74.9 4.6 101 2-115 41-152 (323)
228 2wqr_A IG epsilon chain C regi 99.1 2.3E-10 7.7E-15 73.9 5.4 100 3-115 148-256 (323)
229 3q5y_A TCR N15 beta; IG, T cel 99.1 1.3E-09 4.5E-14 67.5 8.7 78 28-115 76-159 (240)
230 2dm3_A KIAA0992 protein, palla 99.0 4.2E-10 1.4E-14 62.0 5.5 61 1-68 38-102 (110)
231 4fqp_A Poliovirus receptor; im 99.0 1.2E-09 4.1E-14 70.1 8.4 74 27-115 79-153 (313)
232 3nl4_H Antigen binding fragmen 99.0 1.1E-09 3.6E-14 66.9 7.7 75 28-115 76-157 (215)
233 2fbj_H IGA-kappa J539 FAB (hea 99.0 1.2E-09 4E-14 67.2 7.6 75 28-116 80-161 (220)
234 3bqu_C 3H6 FAB light chain; be 99.0 1.1E-10 3.9E-15 71.9 2.9 74 28-115 94-171 (233)
235 1l6x_A Immunoglobulin gamma-1 99.0 4.2E-10 1.4E-14 68.5 5.3 102 3-115 38-146 (207)
236 3mtr_A N-CAM-1, NCAM-1, neural 99.0 4.4E-09 1.5E-13 64.1 9.8 60 1-67 47-111 (215)
237 1dee_B IGM RF 2A2; FAB-IBP com 99.0 1.9E-09 6.6E-14 66.3 8.1 75 28-115 80-163 (223)
238 3nfj_J T cell receptor beta ch 99.0 1.2E-09 4.1E-14 67.9 7.2 78 28-115 75-161 (245)
239 2cpc_A KIAA0657 protein; immun 99.0 1.5E-09 5E-14 60.1 6.6 58 2-69 42-101 (113)
240 3qib_D 2B4 beta chain; IG doma 99.0 9.8E-10 3.3E-14 69.3 6.5 78 28-115 102-186 (270)
241 2w59_A IGY FCU3-4; immunoglobu 99.0 2.6E-10 8.8E-15 70.8 3.7 100 3-115 47-155 (231)
242 1gl4_B Basement membrane-speci 99.0 1.4E-09 4.9E-14 58.7 6.3 55 2-66 41-96 (98)
243 1nct_A Titin; cell adhesion, g 99.0 4.7E-10 1.6E-14 61.7 4.1 58 2-66 44-104 (106)
244 2dav_A SLOW MYBP-C, myosin-bin 99.0 1.3E-09 4.5E-14 62.0 5.9 36 27-68 75-111 (126)
245 3cx2_A Myosin-binding protein 99.0 3.4E-09 1.2E-13 58.3 7.6 34 27-66 72-106 (108)
246 2dm2_A Palladin; beta-sandwich 99.0 2.5E-09 8.5E-14 58.9 6.9 61 1-68 37-102 (110)
247 2wbj_D OB TCR; transmembrane, 99.0 4.1E-10 1.4E-14 71.5 4.0 78 28-115 101-187 (279)
248 2yr3_A Myosin light chain kina 99.0 4.6E-10 1.6E-14 60.7 3.7 53 1-61 40-92 (99)
249 2edn_A Myosin-binding protein 99.0 5.2E-10 1.8E-14 62.9 4.0 36 27-68 80-116 (118)
250 3v2a_R Vascular endothelial gr 99.0 9.3E-09 3.2E-13 72.8 11.2 100 2-116 157-262 (772)
251 3r4d_A CEA-related cell adhesi 99.0 1.5E-09 5.2E-14 65.6 6.2 60 1-67 138-197 (208)
252 1iga_A IGA1; immunoglobulin; N 99.0 1.7E-09 5.7E-14 73.3 6.9 76 27-115 309-387 (475)
253 2v9r_A Roundabout homolog 1; p 99.0 3.1E-09 1.1E-13 64.2 7.4 60 1-68 141-202 (212)
254 2r15_A Myomesin-1; sarcomeric 99.0 5.9E-09 2E-13 63.1 8.7 60 1-67 146-209 (212)
255 1za6_B IGG heavy chain; immuno 99.0 7.4E-10 2.5E-14 72.1 4.8 105 2-116 152-280 (344)
256 1igt_B IGG2A intact antibody - 99.0 4.7E-09 1.6E-13 70.4 8.8 75 28-115 80-160 (444)
257 2j6e_L IGM, FAB light chain; a 99.0 2.4E-10 8.1E-15 70.5 2.3 75 28-115 92-172 (234)
258 2v5t_A NCAM2, N-CAM 2, neural 98.9 4.5E-09 1.5E-13 62.4 7.4 59 1-66 127-186 (189)
259 3bfo_A Mucosa-associated lymph 98.9 2.4E-09 8.3E-14 57.1 5.6 47 1-61 32-78 (91)
260 3s35_X Vascular endothelial gr 98.9 1.5E-09 5.2E-14 60.8 5.0 61 2-69 40-111 (122)
261 1iga_A IGA1; immunoglobulin; N 98.9 5.5E-09 1.9E-13 70.8 8.5 105 3-114 160-284 (475)
262 1oga_E TRBC1, T-cell receptor 98.9 3.6E-09 1.2E-13 66.2 7.0 79 27-115 76-160 (252)
263 1hzh_H IGG, immunoglobulin hea 98.9 7.7E-10 2.6E-14 74.5 4.1 102 3-115 284-392 (457)
264 1i1c_A IGG2A, IG gamma-2A chai 98.9 1.2E-09 4.1E-14 68.3 4.7 99 3-115 52-160 (239)
265 3bn9_D E2 FAB heavy chain; ant 98.9 2.6E-09 8.8E-14 67.5 6.1 75 28-115 80-170 (257)
266 1igy_B IGG1 intact antibody MA 98.9 8.1E-10 2.8E-14 74.0 3.9 75 28-115 79-156 (434)
267 2gki_A Nuclease; anti-DNA anti 98.9 6E-09 2E-13 66.6 7.6 80 28-115 102-200 (291)
268 1mju_H Immunoglobulin MS6-12; 98.9 5.8E-09 2E-13 64.4 7.3 75 28-115 80-158 (227)
269 1hxm_B Gamma-delta T-cell rece 98.9 3.8E-09 1.3E-13 65.7 6.2 78 28-115 81-169 (242)
270 2v9t_A Roundabout homolog 1; s 98.9 7.5E-09 2.6E-13 57.5 6.7 59 1-61 38-100 (117)
271 3s97_C Contactin-1; carbonic a 98.9 8E-09 2.7E-13 61.8 7.0 58 1-67 142-200 (201)
272 3m8o_H Immunoglobulin A1 heavy 98.9 3E-08 1E-12 60.7 9.7 73 28-115 82-161 (221)
273 3to4_D NKT vbeta2 (mouse varia 98.9 4.9E-09 1.7E-13 65.6 6.2 77 29-115 76-161 (253)
274 2nzi_A Titin; IG-domain, FNIII 98.9 6.3E-08 2.2E-12 61.6 11.1 101 1-115 133-246 (305)
275 2e6p_A Obscurin-like protein 1 98.9 1.4E-08 4.8E-13 55.3 7.0 47 4-57 41-89 (104)
276 2a38_A Titin; Z1Z2, structural 98.9 1.1E-08 3.6E-13 61.1 7.1 58 1-65 132-192 (194)
277 1olz_A Semaphorin 4D; developm 98.8 2.6E-09 8.9E-14 75.4 4.7 89 1-106 561-655 (663)
278 1dn0_B IGM-kappa cold agglutin 98.8 5.7E-08 1.9E-12 60.1 10.0 74 28-115 79-163 (232)
279 2edf_A Obscurin; beta-sandwich 98.8 6.8E-09 2.3E-13 56.5 5.2 57 2-68 37-95 (103)
280 2j8h_A Titin, connectin; cardi 98.8 2.1E-08 7.3E-13 60.0 7.8 59 1-66 133-195 (197)
281 2yd1_A Tyrosine-protein phosph 98.8 1.6E-08 5.6E-13 61.4 7.3 60 1-68 139-200 (212)
282 1x44_A Myosin-binding protein 98.8 1.2E-08 4.1E-13 55.6 5.9 57 2-68 36-96 (103)
283 2dm7_A KIAA1556 protein; beta- 98.8 1E-08 3.5E-13 56.2 5.7 57 2-68 36-94 (108)
284 3so5_A LIG-3, leucine-rich rep 98.8 1.1E-08 3.8E-13 55.9 5.9 52 2-60 42-103 (112)
285 2k1m_A Myosin-binding protein 98.8 2.9E-08 1E-12 53.2 7.3 44 2-52 37-82 (95)
286 2yuv_A Myosin-binding protein 98.8 1.9E-08 6.6E-13 54.4 6.6 45 1-52 36-82 (100)
287 1sy6_A T-cell surface glycopro 98.8 2.5E-09 8.6E-14 65.2 3.3 51 2-59 141-193 (204)
288 2dlt_A Myosin binding protein 98.8 7.7E-09 2.6E-13 56.6 4.8 46 3-55 38-85 (106)
289 3liz_H 4C3 monoclonal antibody 98.8 2.2E-08 7.5E-13 62.7 7.3 75 28-115 80-161 (253)
290 2edh_A Obscurin; structural ge 98.8 2.6E-08 8.9E-13 55.0 6.5 56 2-68 47-105 (113)
291 3uto_A Twitchin; kinase, muscl 98.8 2.7E-08 9.3E-13 69.3 7.9 59 1-66 511-572 (573)
292 2aty_A Complement receptor chi 98.8 2.1E-08 7.2E-13 66.4 7.1 99 3-115 203-311 (376)
293 1igy_B IGG1 intact antibody MA 98.8 1.3E-08 4.6E-13 68.1 6.2 105 3-116 152-270 (434)
294 3fku_X Neutralizing antibody F 98.8 2.1E-08 7.3E-13 63.7 6.8 80 28-115 80-176 (280)
295 2v44_A NCAM2, neural cell adhe 98.8 3.4E-08 1.2E-12 58.8 7.3 53 1-60 125-178 (189)
296 2xqy_G A13-D6.3 monoclonal ant 98.8 2.4E-08 8.4E-13 63.0 6.9 75 28-115 86-166 (261)
297 2eny_A Obscurin; beta-sandwich 98.8 3.8E-09 1.3E-13 57.9 2.8 57 2-68 39-97 (104)
298 1jbj_A CD3 epsilon and gamma e 98.8 4.3E-09 1.5E-13 63.2 3.2 47 1-59 133-179 (186)
299 2iep_A Muscle-specific kinase 98.8 3.7E-08 1.3E-12 58.6 7.2 60 1-68 129-190 (192)
300 2vr9_A Roundabout 1, ROBO; imm 98.8 5.7E-08 1.9E-12 59.0 8.0 54 1-61 138-198 (217)
301 1epf_A NCAM, protein (neural c 98.7 4.2E-08 1.4E-12 58.4 7.2 53 1-60 129-182 (191)
302 1pd6_A Cardiac MYBP-C;, myosin 98.7 1.2E-08 4E-13 56.0 4.3 46 2-54 45-93 (104)
303 2id5_A Lingo-1, leucine rich r 98.7 3.3E-08 1.1E-12 67.0 7.3 59 1-66 414-475 (477)
304 4fa8_A Secreted protein BARF1; 98.7 1.7E-08 5.8E-13 61.6 5.4 54 1-61 135-194 (203)
305 2wv3_A Neuroplastin; igcam, me 98.7 1.4E-07 4.9E-12 56.2 9.3 59 1-66 121-188 (190)
306 1ypz_F T-cell receptor gamma c 98.7 2.6E-08 9E-13 61.6 6.0 80 28-115 80-167 (230)
307 2eo1_A OBSCN protein, cDNA FLJ 98.7 1.1E-08 3.7E-13 55.5 3.8 47 2-55 40-88 (102)
308 3lcy_A Titin; A-BAND, IG tande 98.7 4.5E-08 1.5E-12 58.4 6.8 59 1-66 132-194 (197)
309 2cry_A KIN of IRRE-like protei 98.7 4E-09 1.4E-13 59.2 2.1 53 2-61 43-105 (122)
310 2ens_A Advanced glycosylation 98.7 1.2E-08 4.1E-13 54.8 3.8 43 2-58 40-82 (96)
311 1fnl_A Low affinity immunoglob 98.7 6.6E-08 2.3E-12 57.2 7.3 47 2-61 119-165 (175)
312 2edk_A Myosin-binding protein 98.7 9.5E-09 3.2E-13 55.8 3.4 47 2-55 37-89 (101)
313 3jz7_A MCAR, CAR, coxsackievir 98.7 9.6E-09 3.3E-13 62.0 3.5 52 1-61 151-204 (214)
314 2yd6_A PTPRD protein; hydrolas 98.7 9.8E-08 3.4E-12 58.0 7.6 60 1-67 137-203 (212)
315 3zyj_A Leucine-rich repeat-con 98.7 1.3E-07 4.5E-12 63.6 8.8 62 1-68 369-433 (440)
316 3zyi_A Leucine-rich repeat-con 98.7 7.3E-08 2.5E-12 65.0 7.6 62 1-68 379-443 (452)
317 3m45_A Cell adhesion molecule 98.7 7.2E-08 2.5E-12 52.5 6.2 58 2-67 36-105 (108)
318 1ypz_E T cell receptor delta, 98.7 1.7E-07 5.7E-12 57.2 8.4 69 28-115 72-154 (207)
319 2cr6_A KIAA1556 protein, obscu 98.7 2.5E-08 8.5E-13 55.4 4.3 57 2-69 43-103 (115)
320 3sgj_C Human FCG3A receptor; r 98.7 1E-07 3.6E-12 57.9 7.3 54 2-68 119-174 (204)
321 2ifg_A High affinity nerve gro 98.7 6.6E-08 2.2E-12 63.1 6.7 54 1-61 275-337 (347)
322 2c1o_A IGK-C protein; FAB frag 98.7 3.8E-08 1.3E-12 61.3 5.3 60 42-115 13-78 (254)
323 3r08_E T-cell surface glycopro 98.7 5.3E-09 1.8E-13 55.1 1.0 39 2-54 27-66 (82)
324 2jll_A NCAM2, neural cell adhe 98.6 5.5E-07 1.9E-11 59.1 10.6 54 1-61 129-186 (389)
325 3ry4_A Low affinity immunoglob 98.6 7.4E-08 2.5E-12 56.4 5.8 47 2-61 116-162 (170)
326 4acp_A IG gamma-1 chain C regi 98.6 2.6E-08 8.7E-13 62.4 3.7 99 3-115 59-167 (240)
327 3mj6_A Junctional adhesion mol 98.6 1.1E-07 3.9E-12 59.4 6.7 59 26-100 200-259 (268)
328 3qhz_H Human monoclonal antibo 98.6 1.2E-07 4.1E-12 58.5 6.7 75 28-115 84-169 (232)
329 1mq8_A ICAM-1, intercellular a 98.6 9.8E-09 3.3E-13 66.1 1.7 102 3-116 120-227 (291)
330 1f97_A Junction adhesion molec 98.6 6.4E-08 2.2E-12 58.3 5.1 52 1-59 134-195 (212)
331 2x1w_L Vascular endothelial gr 98.6 1.4E-07 4.6E-12 57.5 6.6 60 2-68 137-207 (213)
332 2dku_A KIAA1556 protein; beta- 98.6 1.2E-07 4.1E-12 51.4 5.7 56 2-68 37-95 (103)
333 3rbg_A Cytotoxic and regulator 98.6 2.1E-07 7.2E-12 52.3 6.8 35 27-68 66-101 (124)
334 3f8u_B Tapasin; endoplasmic re 98.6 1.9E-07 6.6E-12 62.4 7.5 74 26-115 253-331 (401)
335 2ny1_B T-cell surface glycopro 98.6 2.3E-07 7.9E-12 55.0 7.2 53 1-68 126-179 (184)
336 1f2q_A High affinity immunoglo 98.6 1.9E-07 6.5E-12 55.2 6.7 54 2-68 116-171 (176)
337 4frw_A Poliovirus receptor-rel 98.6 5.9E-08 2E-12 58.4 4.6 53 1-60 147-202 (218)
338 1b6u_A KIR2DL3, P58 killer cel 98.6 2.5E-08 8.7E-13 63.0 3.0 95 2-116 135-238 (257)
339 3qr2_A Basigin; CD147, EMMPRIN 98.6 3.2E-08 1.1E-12 56.5 3.1 29 26-60 89-117 (137)
340 2fbo_J V1V2;, variable region- 98.6 1E-07 3.5E-12 58.9 5.5 52 1-59 165-239 (250)
341 3b5h_A Cervical EMMPRIN, HAB18 98.6 3.4E-07 1.2E-11 54.2 7.3 58 2-66 114-181 (184)
342 4f80_A Butyrophilin subfamily 98.6 9.2E-08 3.1E-12 58.6 4.8 60 1-66 148-211 (226)
343 2va4_A NCAM2, N-CAM 2, neural 98.5 6.2E-07 2.1E-11 53.2 8.2 59 1-66 123-191 (192)
344 2qsq_A Carcinoembryonic antige 98.5 4.3E-07 1.5E-11 50.4 6.9 30 23-58 68-97 (111)
345 2e6q_A Obscurin-like protein 1 98.5 2.7E-07 9.3E-12 51.3 6.1 59 1-68 35-105 (112)
346 1zvo_C Myeloma immunoglobulin 98.5 5.6E-07 1.9E-11 61.7 8.8 98 3-115 330-438 (512)
347 1ugn_A LIR1, leukocyte immunog 98.5 2.3E-07 7.8E-12 55.8 6.0 50 1-57 128-181 (198)
348 3k0w_A Mucosa-associated lymph 98.5 2.5E-07 8.7E-12 56.4 5.7 47 1-61 147-193 (218)
349 1hng_A CD2; T lymphocyte adhes 98.5 7.9E-08 2.7E-12 57.2 3.3 45 1-61 124-168 (176)
350 2e7b_A Obscurin; IG-like domai 98.5 1.6E-07 5.6E-12 50.8 4.3 42 4-52 39-82 (103)
351 3tv3_H PGT128 heavy chain, IG 98.5 2.5E-07 8.7E-12 57.4 5.6 75 28-115 87-177 (239)
352 2c5d_C AXL oncogene, tyrosine- 98.5 1.9E-07 6.3E-12 55.9 4.7 53 2-66 136-191 (195)
353 3grw_A Fibroblast growth facto 98.5 3.1E-07 1.1E-11 56.5 5.8 61 1-68 143-218 (241)
354 2v5y_A Receptor-type tyrosine- 98.5 4E-07 1.4E-11 64.7 7.0 94 2-115 106-200 (731)
355 1xau_A B- and T-lymphocyte att 98.5 1.1E-06 3.8E-11 48.5 7.1 55 1-61 44-107 (122)
356 1nbq_A JAM, junctional adhesio 98.5 5.5E-08 1.9E-12 58.5 2.2 53 1-60 137-198 (209)
357 3shs_A HOC head outer capsid p 98.5 7.7E-06 2.6E-10 52.2 11.5 91 3-116 37-136 (304)
358 1rhf_A Tyrosine-protein kinase 98.4 4.7E-07 1.6E-11 53.4 5.7 46 2-61 128-174 (182)
359 1zvo_C Myeloma immunoglobulin 98.4 1.6E-06 5.4E-11 59.5 8.9 36 80-115 297-334 (512)
360 1z9m_A GAPA225; nectin-like, I 98.4 6.5E-07 2.2E-11 51.5 5.9 35 27-68 103-138 (145)
361 1ow0_A IG alpha-1 chain C regi 98.4 3.4E-08 1.2E-12 60.4 0.4 75 28-115 67-144 (214)
362 2d3v_A Leukocyte immunoglobuli 98.4 2.7E-07 9.2E-12 55.5 4.1 49 2-57 128-180 (196)
363 3n9g_H FAB fragment of MAB CR4 98.4 1E-06 3.4E-11 54.3 6.7 74 28-114 80-164 (230)
364 3u2s_H PG9 heavy chain; greek 98.4 8E-07 2.7E-11 55.6 6.3 75 28-115 79-178 (248)
365 2aw2_A B and T lymphocyte atte 98.4 2.9E-06 9.8E-11 46.3 7.5 54 1-61 41-101 (120)
366 3ojm_B Fibroblast growth facto 98.4 1.7E-06 5.9E-11 52.6 7.5 61 1-68 147-221 (231)
367 3knb_B Obscurin-like protein 1 98.4 4.6E-07 1.6E-11 49.8 4.4 36 80-116 14-49 (107)
368 3sob_H Antibody heavy chain, l 98.4 1.5E-06 5.1E-11 54.4 7.1 74 28-114 103-190 (256)
369 4i0k_A CD276 antigen; immunogl 98.4 9.9E-07 3.4E-11 53.6 6.1 61 1-68 140-206 (222)
370 3knb_A Titin; IG-like, titin, 98.4 3.2E-07 1.1E-11 49.8 3.2 36 80-116 6-41 (100)
371 1eaj_A Coxsackie virus and ade 98.3 2.3E-06 7.9E-11 47.4 6.7 34 27-66 89-123 (126)
372 3p2t_A Leukocyte immunoglobuli 98.3 3.4E-07 1.1E-11 55.0 3.3 49 2-57 128-179 (196)
373 1dr9_A B7-1 (CD80), T lymphocy 98.3 9.3E-07 3.2E-11 53.1 4.9 53 1-61 136-193 (201)
374 3mlr_H Human monoclonal anti-H 98.3 1.2E-06 4.2E-11 53.9 5.3 74 28-114 80-165 (226)
375 4hwn_A FC receptor-like A; FCR 98.3 4.2E-06 1.4E-10 45.9 6.9 43 3-58 43-85 (108)
376 3iu4_H CHP3 FAB heavy chain; a 98.3 1.1E-06 3.7E-11 55.5 5.0 74 28-114 79-163 (263)
377 1wit_A Twitchin 18TH IGSF modu 98.3 1.6E-06 5.4E-11 46.0 4.6 36 80-116 3-38 (93)
378 3q0h_A T cell immunoreceptor w 98.3 1.1E-05 3.9E-10 44.8 8.3 38 26-69 70-109 (117)
379 2gi7_A GPVI protein; IG-like d 98.3 3.4E-07 1.2E-11 54.5 2.0 47 2-57 122-168 (184)
380 1uct_A Immunoglobulin alpha FC 98.2 8.8E-07 3E-11 54.4 3.8 46 2-56 135-180 (218)
381 2ptt_A CD48 antigen; CD244, CD 98.2 1.1E-05 3.7E-10 44.1 7.6 36 26-67 72-107 (110)
382 3bp6_B Programmed cell death 1 98.2 2.2E-06 7.5E-11 51.4 5.2 51 1-61 132-185 (202)
383 2oyp_A Hepatitis A virus cellu 98.2 5.2E-06 1.8E-10 45.1 6.2 28 27-60 72-99 (109)
384 1oll_A NK receptor; immune sys 98.2 4.3E-07 1.5E-11 54.3 1.7 46 2-56 127-172 (188)
385 3cx2_A Myosin-binding protein 98.2 3E-06 1E-10 46.3 4.9 35 80-115 5-42 (108)
386 1iam_A ICAM-1, CD54, intercell 98.2 1.1E-05 3.9E-10 48.6 7.6 70 28-115 51-124 (185)
387 2zg1_A Sialic acid-binding IG- 98.2 3.8E-06 1.3E-10 50.7 5.5 47 1-58 156-202 (214)
388 2if7_A SLAM family member 6; N 98.2 4.7E-06 1.6E-10 50.0 5.7 44 2-60 140-183 (193)
389 3udw_C Poliovirus receptor; PV 98.1 1.2E-05 4.1E-10 44.1 6.7 37 26-68 78-116 (118)
390 4fmk_A Poliovirus receptor-rel 98.1 3.3E-06 1.1E-10 50.9 4.7 52 1-60 151-208 (225)
391 3sbw_C Programmed cell death 1 98.1 3.3E-06 1.1E-10 51.2 4.7 60 1-67 145-210 (222)
392 1pko_A Myelin oligodendrocyte 98.1 1.7E-05 5.7E-10 45.1 7.2 35 28-68 86-121 (139)
393 2v9t_A Roundabout homolog 1; s 98.1 2.2E-06 7.5E-11 47.4 3.4 35 80-115 10-44 (117)
394 2dru_A Chimera of CD48 antigen 98.1 6.4E-06 2.2E-10 49.1 5.6 45 1-61 129-173 (180)
395 3qr2_A Basigin; CD147, EMMPRIN 98.1 1E-05 3.5E-10 45.9 5.7 36 80-116 22-57 (137)
396 1g1c_A Immunoglobulin-like dom 98.1 6.7E-06 2.3E-10 43.9 4.6 35 80-115 6-40 (99)
397 3qp3_A Titin; I-SET IG-like, s 98.1 6.8E-06 2.3E-10 44.2 4.7 35 80-115 9-43 (103)
398 2dm2_A Palladin; beta-sandwich 98.1 7.6E-06 2.6E-10 44.6 4.7 36 80-116 9-44 (110)
399 1hnf_A CD2; T lymphocyte adhes 98.1 1.9E-05 6.4E-10 47.3 6.8 46 1-62 129-174 (182)
400 1nfd_E H57 FAB; complex (immun 98.1 8.1E-07 2.8E-11 53.8 0.8 50 2-58 145-201 (212)
401 2cqv_A MLCK, myosin light chai 98.0 8.6E-06 2.9E-10 44.7 4.8 35 80-115 8-42 (114)
402 1u2h_A APEG-1, aortic preferen 98.0 8.4E-06 2.9E-10 43.5 4.7 35 80-115 6-40 (99)
403 1i1r_A GP130, interleukin-6 re 98.0 7.2E-05 2.5E-09 47.7 9.8 44 2-55 41-86 (303)
404 2edj_A Roundabout homolog 2; K 98.0 8.7E-06 3E-10 43.6 4.7 35 80-115 9-43 (100)
405 1p6f_A NKP46, natural cytotoxi 98.0 3.2E-06 1.1E-10 52.8 3.3 46 2-56 130-175 (242)
406 3mj8_L Stimulatory hamster ant 98.0 2.2E-06 7.5E-11 51.8 2.4 52 2-60 146-204 (213)
407 3bfo_A Mucosa-associated lymph 98.0 1.5E-05 5.2E-10 42.0 5.3 35 80-115 4-38 (91)
408 1vca_A VCAM-D1,2, human vascul 98.0 1.3E-05 4.5E-10 48.5 5.6 50 2-58 124-179 (202)
409 2fbj_H IGA-kappa J539 FAB (hea 98.0 1.9E-05 6.6E-10 48.2 6.3 54 2-62 155-214 (220)
410 2pet_A Lutheran blood group gl 98.0 5.2E-06 1.8E-10 50.6 3.7 48 1-55 149-211 (231)
411 2vsd_A CHIR AB1; immune system 98.0 1.1E-05 3.8E-10 44.0 4.7 45 2-56 33-79 (105)
412 2kkq_A Myotilin; unknown funct 98.0 7E-06 2.4E-10 45.5 3.9 35 80-115 16-50 (116)
413 1n26_A IL-6 receptor alpha cha 98.0 3.9E-05 1.3E-09 49.6 7.9 56 2-68 37-93 (325)
414 2yr3_A Myosin light chain kina 98.0 7.8E-06 2.7E-10 43.7 3.9 35 80-115 12-46 (99)
415 3khq_A B-cell antigen receptor 98.0 1.1E-05 3.9E-10 45.9 4.7 24 28-57 78-101 (133)
416 2dm3_A KIAA0992 protein, palla 98.0 7.9E-06 2.7E-10 44.5 3.8 36 80-116 10-45 (110)
417 2kdg_A Myotilin; immonoglobuli 98.0 8.1E-06 2.8E-10 43.6 3.5 35 80-115 6-40 (100)
418 3puc_A Titin; I-SET IG-like do 97.9 1.7E-05 5.7E-10 42.2 4.6 35 80-115 7-41 (99)
419 1nct_A Titin; cell adhesion, g 97.9 7E-06 2.4E-10 44.7 3.1 36 80-116 15-50 (106)
420 2cr6_A KIAA1556 protein, obscu 97.9 1.2E-05 4E-10 44.4 4.0 36 80-116 14-49 (115)
421 4gos_A V-SET domain-containing 97.9 1.7E-05 5.8E-10 44.6 4.7 33 28-66 85-118 (125)
422 3qib_D 2B4 beta chain; IG doma 97.9 1.6E-05 5.3E-10 49.9 5.0 57 42-115 5-61 (270)
423 3d9a_L Light chain of hyhel10 97.9 3.4E-06 1.2E-10 50.9 1.9 49 3-58 145-202 (213)
424 1ncn_A T lymphocyte activation 97.9 8.8E-05 3E-09 40.4 7.4 29 26-60 68-96 (110)
425 2d9q_B Granulocyte colony-stim 97.9 2.9E-05 1E-09 49.8 6.3 49 2-58 35-86 (313)
426 1h5b_A Murine T cell receptor 97.9 3.9E-05 1.3E-09 42.1 6.0 24 28-57 72-95 (113)
427 3u1s_H FAB PGT145 heavy chain; 97.9 1.2E-05 4E-10 50.8 4.2 20 28-53 103-122 (267)
428 1xt5_A Variable region-contain 97.9 3E-05 1E-09 43.6 5.6 24 27-56 92-115 (135)
429 1ccz_A Protein (CD58); LFA-3, 97.9 9E-06 3.1E-10 48.0 3.3 45 1-61 119-163 (171)
430 2eo9_A Roundabout homolog 1; b 97.9 1.6E-05 5.5E-10 43.9 4.0 35 80-115 9-43 (118)
431 3irg_B Obscurin-like protein 1 97.9 2.4E-05 8.4E-10 42.2 4.6 35 80-115 14-48 (107)
432 3kvq_A Vascular endothelial gr 97.9 1.3E-05 4.5E-10 43.4 3.5 35 80-115 11-45 (108)
433 3irg_A Titin; IG-like, titin, 97.9 1.7E-05 5.6E-10 42.2 3.8 35 80-115 6-40 (100)
434 2dav_A SLOW MYBP-C, myosin-bin 97.9 1.7E-05 5.8E-10 44.9 3.9 35 80-115 8-45 (126)
435 2bk8_A Connectin, M1, titin he 97.9 3.7E-05 1.3E-09 40.8 5.2 31 85-115 6-37 (97)
436 3c6l_A TCR 2W20 alpha chain; T 97.1 2E-06 6.8E-11 51.9 0.0 71 28-115 73-145 (185)
437 1nkr_A P58-CL42 KIR; inhibitor 97.8 1.7E-05 5.8E-10 47.7 3.9 45 2-56 136-184 (201)
438 1gl4_B Basement membrane-speci 97.8 4.6E-05 1.6E-09 40.5 5.2 36 80-115 10-46 (98)
439 1jhl_L IGG1-kappa D11.15 FV (l 97.8 8.8E-05 3E-09 40.3 6.3 23 28-56 72-94 (108)
440 1hxm_A Gamma-delta T-cell rece 97.8 0.00017 5.9E-09 44.6 8.2 22 28-55 76-97 (229)
441 2v5y_A Receptor-type tyrosine- 97.8 5.4E-05 1.9E-09 53.9 6.7 83 2-105 194-285 (731)
442 3caf_A Fibroblast growth facto 97.8 1.9E-05 6.5E-10 42.2 3.5 36 80-115 5-43 (100)
443 1gxe_A Myosin binding protein 97.8 1.4E-05 4.9E-10 45.9 2.9 30 87-116 25-54 (139)
444 2ghw_B Anti-SARS SCFV antibody 97.8 5.6E-05 1.9E-09 46.6 5.8 27 28-60 206-232 (247)
445 1lk3_L 9D7 light chain; antige 97.8 1E-05 3.5E-10 48.8 2.3 48 3-57 144-200 (210)
446 3nl4_L Antigen binding fragmen 97.8 1.7E-05 5.9E-10 47.8 3.3 46 1-53 144-198 (213)
447 2j6e_L IGM, FAB light chain; a 97.8 1.7E-05 5.8E-10 48.5 3.2 49 3-58 168-224 (234)
448 1fhg_A Telokin; immunoglobulin 97.8 4.1E-05 1.4E-09 44.3 4.6 36 80-116 42-77 (154)
449 1waa_A Titin; metal binding pr 97.7 8E-05 2.7E-09 39.6 5.3 35 80-116 6-40 (93)
450 3m45_A Cell adhesion molecule 97.7 5.6E-05 1.9E-09 40.6 4.6 35 80-115 7-41 (108)
451 3r0n_A Poliovirus receptor-rel 97.7 0.00016 5.3E-09 40.4 6.5 27 28-60 94-121 (128)
452 3tv3_L PGT128 light chain, IG 97.7 7.7E-06 2.6E-10 49.4 1.0 52 2-60 143-202 (211)
453 2e7b_A Obscurin; IG-like domai 97.7 4.4E-05 1.5E-09 41.0 3.9 34 80-115 9-42 (103)
454 2xzc_L FAB A.17 light chain; i 97.7 1.9E-05 6.5E-10 47.8 2.7 48 3-57 147-203 (216)
455 1nqb_A Single-chain antibody f 97.7 0.00013 4.5E-09 45.6 6.5 26 28-59 197-222 (256)
456 1xiw_B T-cell surface glycopro 97.7 3.3E-05 1.1E-09 40.1 3.1 46 2-61 18-63 (79)
457 2ckn_A Basic fibroblast growth 97.7 3.3E-05 1.1E-09 41.0 3.3 35 80-116 10-44 (95)
458 1q9r_B S25-2 FAB (IGG1K) heavy 97.7 4.1E-05 1.4E-09 46.5 4.1 50 2-60 158-214 (222)
459 2or8_A Hepatitis A virus cellu 97.7 0.00021 7.1E-09 39.1 6.6 25 28-58 74-98 (116)
460 1q0x_L FAB 9B1, light chain; a 97.7 2.5E-05 8.6E-10 47.1 3.0 48 3-57 148-203 (212)
461 2e7c_A Myosin-binding protein 97.7 5E-05 1.7E-09 41.9 4.0 29 87-115 31-59 (118)
462 1ntl_A CRRY-IG; immunology, co 97.7 0.00015 5E-09 50.4 7.1 100 2-115 377-486 (551)
463 3m8o_H Immunoglobulin A1 heavy 97.7 0.00011 3.8E-09 44.6 5.8 53 2-61 156-215 (221)
464 2lvc_A Obscurin-like protein 1 97.7 7.1E-05 2.4E-09 39.8 4.3 35 80-115 4-40 (91)
465 1pd6_A Cardiac MYBP-C;, myosin 97.7 7.5E-05 2.6E-09 40.5 4.3 35 80-115 16-50 (104)
466 2edk_A Myosin-binding protein 97.7 4.5E-05 1.5E-09 40.9 3.4 34 80-115 9-42 (101)
467 2ens_A Advanced glycosylation 97.6 2.2E-05 7.6E-10 41.7 2.1 35 80-115 11-45 (96)
468 3bn3_B ICAM-5, intercellular a 97.6 0.00013 4.5E-09 44.3 5.6 72 28-115 53-127 (196)
469 3juy_B 3B3 single chain varian 97.6 0.00014 4.7E-09 45.2 5.9 26 28-59 221-246 (256)
470 2edn_A Myosin-binding protein 97.6 3E-05 1E-09 43.4 2.4 35 80-115 13-50 (118)
471 2dlt_A Myosin binding protein 97.6 7.8E-05 2.7E-09 40.3 4.1 34 80-115 9-42 (106)
472 2k1m_A Myosin-binding protein 97.6 9.3E-05 3.2E-09 39.2 4.2 35 80-116 9-43 (95)
473 2p1y_A Bispecific alpha/beta T 97.6 0.00011 3.8E-09 45.0 5.1 23 28-56 200-222 (238)
474 3umt_A SCFV heavy chain and li 97.6 0.00017 5.7E-09 44.8 5.9 34 28-67 209-244 (256)
475 3pv7_A B7-H6, IG-like domain-c 97.6 6.9E-05 2.4E-09 46.3 4.1 25 28-58 189-213 (248)
476 1f3r_B FV antibody fragment; I 97.6 8.5E-05 2.9E-09 46.3 4.4 23 28-56 210-232 (257)
477 2or7_A T-cell immunoglobulin a 97.6 0.00042 1.4E-08 37.9 6.8 24 28-57 75-98 (115)
478 3s96_B 3B5H10 FAB light chain; 97.6 1.9E-05 6.6E-10 47.7 1.3 51 3-60 154-211 (218)
479 2eny_A Obscurin; beta-sandwich 97.6 7.9E-05 2.7E-09 40.4 3.5 36 80-116 9-45 (104)
480 1neu_A Myelin P0 protein; stru 97.6 0.00018 6.2E-09 39.7 5.0 26 27-58 81-106 (124)
481 2bnu_A TCR alpha chain, T-cell 97.6 0.00026 8.8E-09 43.0 6.1 68 28-112 73-147 (203)
482 3eow_R Poliovirus receptor; im 97.5 2.9E-05 1E-09 47.1 1.8 26 28-59 177-202 (221)
483 2edf_A Obscurin; beta-sandwich 97.5 0.00011 3.6E-09 39.5 3.9 34 80-115 9-42 (103)
484 2lu7_A Obscurin-like protein 1 97.5 7.7E-05 2.6E-09 39.0 3.1 27 88-115 4-30 (84)
485 1qok_A MFE-23 recombinant anti 97.5 0.0002 6.7E-09 45.3 5.6 26 28-59 232-257 (282)
486 1jhl_L IGG1-kappa D11.15 FV (l 97.5 0.00025 8.6E-09 38.4 5.3 28 88-115 9-36 (108)
487 2yuv_A Myosin-binding protein 97.5 0.00019 6.5E-09 38.3 4.7 36 80-116 8-43 (100)
488 1mq8_A ICAM-1, intercellular a 97.5 0.00028 9.4E-09 45.4 6.1 71 28-116 51-125 (291)
489 2e6p_A Obscurin-like protein 1 97.5 7.2E-05 2.4E-09 40.2 2.9 35 80-115 8-44 (104)
490 1c1e_H Catalytic antibody 1E9 97.5 7.9E-05 2.7E-09 45.1 3.3 51 2-60 155-211 (219)
491 2coq_A NEW antigen receptor va 97.5 0.00025 8.6E-09 38.5 5.0 46 2-54 32-87 (108)
492 2ywz_A NEW antigen receptor va 97.5 0.0003 1E-08 38.5 5.3 21 28-54 67-87 (111)
493 1x44_A Myosin-binding protein 97.5 9.9E-05 3.4E-09 39.7 3.3 32 82-115 10-41 (103)
494 2q20_A VK1 O18/O8 germline lig 97.5 0.0003 1E-08 38.3 5.3 22 28-55 74-95 (109)
495 2e6q_A Obscurin-like protein 1 97.5 0.00022 7.6E-09 39.4 4.7 34 80-116 9-42 (112)
496 3r06_A Anti-mouse CD3epsilon a 97.5 4.8E-05 1.6E-09 45.8 2.0 48 2-56 144-200 (213)
497 3so5_A LIG-3, leucine-rich rep 97.5 0.00039 1.3E-08 37.3 5.5 35 80-115 11-47 (112)
498 1mqk_L Antibody 7E2 FV fragmen 97.4 0.00031 1.1E-08 39.0 5.1 23 28-56 72-94 (120)
499 3bqu_C 3H6 FAB light chain; be 97.4 3E-05 1E-09 47.4 0.9 47 3-56 167-222 (233)
500 2yuz_A Myosin-binding protein 97.4 0.00012 4.2E-09 39.4 3.2 33 80-115 8-40 (100)
No 1
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.72 E-value=1.9e-17 Score=101.50 Aligned_cols=72 Identities=19% Similarity=0.355 Sum_probs=58.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+ |.+...+ ....+.+|+++.|.|.+.|
T Consensus 70 ~L~I~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~p----------~~~~~~~-~~~~v~~g~~~~l~C~~~G 132 (203)
T 4fa8_A 70 FLVVTAANIS------HDGNYLCRMKLGETEVTKQEHLSVVKP----------LTLSVHS-ERSQFPDFSVLTVTCTVNA 132 (203)
T ss_dssp EEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEEE----------EEEEEEE-EECCSSCSCCEEEEEEEEE
T ss_pred EEEEccCCHH------HCeEEEEEEEcCCCcEEEEEEEEecCC----------ceeeecc-eeEEEcCCCEEEEEEEcCC
Confidence 6999999766 999999999999887764 55666553 5554444 5666778999999999999
Q ss_pred cCCceeEEeC
Q psy11568 107 SPTPKIEWLI 116 (116)
Q Consensus 107 ~P~p~i~W~~ 116 (116)
.|.|.++|++
T Consensus 133 ~P~P~v~W~~ 142 (203)
T 4fa8_A 133 FPHPHVQWLM 142 (203)
T ss_dssp ESCCEEEECC
T ss_pred CCCCEEEEEE
Confidence 9999999963
No 2
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.70 E-value=2.6e-16 Score=94.72 Aligned_cols=92 Identities=16% Similarity=0.211 Sum_probs=71.7
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGP 80 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p 80 (116)
|.++| +++|..+.... ....++.|.|.++..+ |+|.|+|.+.|. +... ...|.|..+ |
T Consensus 35 ~~v~W-~~~~~~~~~~~---~~~~~~~L~i~~~~~~------d~G~Y~C~~~n~-~~~~~~~~l~V~~~----------p 93 (190)
T 2wv3_A 35 MYSYW-TKNGVELTATR---KNASNMEYRINKPRAE------DSGEYHCVYHFV-SAPKANATIEVKAA----------P 93 (190)
T ss_dssp EEEEE-EETTEECTTCC---BCCSEEEEEESSCCGG------GCEEEEEEEEET-TEEEEEEEEEEECC----------C
T ss_pred eEEEE-EECCEECcccc---eEeccEEEEEecCCcc------cCEEEEEEEEeC-CcccccEEEEEecC----------C
Confidence 67999 89998876321 1124458999999766 999999999999 6554 355555553 6
Q ss_pred ceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 81 LFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 94 ~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~ 127 (190)
T 2wv3_A 94 DITGHK-RSENKNEGQDAMMYCKSVGYPHPEWMWR 127 (190)
T ss_dssp EEEEEC-SEEEEETTSCEEEEEEEECSSCCEEEEE
T ss_pred cccccC-CcceeeCCCcEEEEEEeCccCCCceEEE
Confidence 666665 6778899999999999999999999997
No 3
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.70 E-value=2e-16 Score=104.60 Aligned_cols=96 Identities=28% Similarity=0.441 Sum_probs=74.0
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
.|.+.|++.+|.++.. ..+....++.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 234 ~p~i~W~k~~~~~~~~--~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~v~~~---------- 295 (384)
T 3kld_A 234 VPTILWRRADGKPIAR--KARRHKSNGILEIPNFQQE------DAGSYECVAENSRGKNVAKGQLTFYAQ---------- 295 (384)
T ss_dssp CCEEEEEETTCCCCCT--TCEECTTSCEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEEE----------
T ss_pred CCcEEEEeCCCccccc--cceecCCCcEEEECCCChh------hCEEEEEEEEcCCCeEEEEEEEEEecC----------
Confidence 3789994446666542 2223334568999999766 999999999999998764 55655553
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 296 P~~~~~~-~~~~v~~g~~v~l~C~~~g~P~p~i~W~ 330 (384)
T 3kld_A 296 PNWVQII-NDIHVAMEESVFWECKANGRPKPTYRWL 330 (384)
T ss_dssp EEEEECC-CCEEECTTCCEEEECEEEEESCCEEEEE
T ss_pred CccccCC-CceEecCCCCEEEEeECCccCCCeEEEE
Confidence 6666665 6788899999999999999999999997
No 4
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.69 E-value=4.3e-16 Score=94.01 Aligned_cols=96 Identities=23% Similarity=0.460 Sum_probs=72.5
Q ss_pred cEEEEEccCCeeeecccc--ceEEee---------CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKD--LRIALS---------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~--~~~~~~---------~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
|.+.| +++|..+..... .+.... ++.|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..
T Consensus 33 ~~v~W-~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~~l~V~~ 105 (195)
T 2c5d_C 33 PEVHW-LRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS------DTGQYQCLVFLGHQTFVSQPGYVGLEG 105 (195)
T ss_dssp CCCEE-EETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST------TCEEEEEEEEETTEEEECCCEEEEECC
T ss_pred cEEEE-EECCEEcccCCCCceEEEEccccccceeeccEEEEEecccc------CCcEEEEEEEeCCCceecccEEEEEec
Confidence 67899 889998875322 222222 247999999766 999999999998876543 3444443
Q ss_pred CcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc-eeEEe
Q psy11568 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP-KIEWL 115 (116)
Q Consensus 69 ~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p-~i~W~ 115 (116)
+ |.+...+ ....+.+|+.+.|.|.+.|.|.| .++|+
T Consensus 106 ~----------p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~v~W~ 142 (195)
T 2c5d_C 106 L----------PYFLEEP-EDRTVAANTPFNLSCQAQGPPEPVDLLWL 142 (195)
T ss_dssp S----------CEEEECC-CCEEECTTCCEEEEEEEECSSCCCEEEEE
T ss_pred C----------CeEEcCC-CcEEEcCCCEEEEEeECCCCCCCCEEEEE
Confidence 3 6666665 66888899999999999999999 99997
No 5
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.69 E-value=7.4e-16 Score=92.00 Aligned_cols=96 Identities=25% Similarity=0.548 Sum_probs=73.7
Q ss_pred cEEEEEccCCeeeeccccceEEeeC----CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN----GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~----~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~ 75 (116)
|.+.| +++|..+...........+ +.|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..+
T Consensus 32 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~~l~V~~~------ 98 (182)
T 1rhf_A 32 PDIQW-VKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERS------DAGRYWCQVEDGGETEISQPVWLTVEGV------ 98 (182)
T ss_dssp CCEEE-EETTEECCSSEEEEEEEETTEEEEEEEESSCCGG------GCEEEEEEESSCTTCEECCCEEEEEECS------
T ss_pred CeEEE-EECCeecCCCCceEEEecCCCceEEEEEeecCcc------cCeEEEEEEEcCCCcEEEEEEEEEEecC------
Confidence 67999 8899888653332333332 47999999766 999999999999776543 45555543
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc-eeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP-KIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p-~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.| .++|+
T Consensus 99 ----p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~~v~W~ 134 (182)
T 1rhf_A 99 ----PFFTVEP-KDLAVPPNAPFQLSCEAVGPPEPVTIVWW 134 (182)
T ss_dssp ----CEEEECC-CCEEECTTCCEEEEEEEECSSSCCEEEEE
T ss_pred ----CeEEecC-cceEecCCCEEEEEeEecCCCCCCEEEEE
Confidence 7776665 66788899999999999999999 99997
No 6
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.69 E-value=4.5e-16 Score=107.54 Aligned_cols=97 Identities=29% Similarity=0.494 Sum_probs=76.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
.|.|+| +++|.++......+....+ ..|.|.++..+ |+|.|+|.|.|..|...+ ..|.|..+
T Consensus 320 ~p~v~W-~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~~~-------- 384 (570)
T 3b43_A 320 EIKVLW-YKDETEIQESSKFRMSFVESVAVLEMYNLSVE------DSGDYTCEAHNAAGSASSSTSLKVKEP-------- 384 (570)
T ss_dssp SCEEEE-EETTEECCCSSSEEEEEETTEEEEEEESCCGG------GCEEEEEEEEBTTBCCEEEEEECEECC--------
T ss_pred CCEEEE-eECCEECCCCCcEEEEEECCEEEEEECCCCcc------cCEEEEEEEEeCCCEEEEEEEEEecCC--------
Confidence 378999 9999988754443333333 36999999766 999999999999998774 55555543
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 385 --P~~~~~~-~~~~~~~G~~v~l~C~~~g~P~p~v~W~ 419 (570)
T 3b43_A 385 --PVFRKKP-HPVETLKGADVHLECELQGTPPFQVSWH 419 (570)
T ss_dssp --CEECSCC-CCEEECTTCCEEEEEEEESSSSCCCEEE
T ss_pred --CeeecCC-CceeecCCCEEEEEEEEecCCCCEEEEE
Confidence 6665555 6778889999999999999999999997
No 7
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.69 E-value=7e-16 Score=93.93 Aligned_cols=107 Identities=13% Similarity=0.192 Sum_probs=73.5
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCc--E-----
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGS--V----- 71 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~--~----- 71 (116)
|.|+| +++|.++....+.+....++ .|.|.++..+ |+|.|+|.+.|..|.... ..+.+.... .
T Consensus 33 ~~i~W-~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~ 105 (212)
T 2r15_A 33 LKVNW-SHNGSAIRYSDRVKTGVTGEQIWLQINEPTPN------DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQR 105 (212)
T ss_dssp CEEEE-EETTEECCCCSSEEEEEETTEEEEEEESCCGG------GCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHH
T ss_pred ceEEE-EECCEEccCCCeEEEEEeCCEEEEEECCCCcc------cCEEEEEEEecCCcceEEEEEEEEeeccchhhhccc
Confidence 78999 99999887544444444444 4999999766 999999999998876553 222221100 0
Q ss_pred ee---eeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 72 VS---LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 72 ~~---~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+. ......|.+....+....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 106 ~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~ 152 (212)
T 2r15_A 106 LKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWL 152 (212)
T ss_dssp HHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEE
T ss_pred cCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEE
Confidence 00 000001555555557788899999999999999999999997
No 8
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.69 E-value=1.8e-15 Score=92.86 Aligned_cols=103 Identities=14% Similarity=0.205 Sum_probs=69.7
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC--C--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEee--
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN--G--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVS-- 73 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~--~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~-- 73 (116)
.|.|+| ++||+++....+.+..... + .|.|.++..+ |+|.|+|.|.| |.... ..+.+.......
T Consensus 32 ~p~i~W-~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~------D~G~Y~C~a~N--g~a~~~~~~~~~~~~~~~~~ 102 (207)
T 3rbs_A 32 NAKVNY-IFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDE------DEGTYTFQLQD--GKATNHSTVVLVGDVFKKLQ 102 (207)
T ss_dssp CCEEEE-EETTEEECSSSSCEEEECTTTCEEEEEESCCCGG------GCEEEEEEEEE--TTEEEEEEEEECTHHHHHHH
T ss_pred CCEEEE-EECCEECccCCCEEEEEeCCCCEEEEEECCCChh------hCEEEEEEEEC--CCeEEEEEEEEEccchhhhc
Confidence 389999 9999999754444444433 3 5999999766 99999999999 44442 222111000000
Q ss_pred ------e----eccCCCceEecCCCeEEEeCCCcEEEEeeecCc-CCceeEEe
Q psy11568 74 ------L----LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PTPKIEWL 115 (116)
Q Consensus 74 ------~----~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~p~i~W~ 115 (116)
. ...+ |.|...+ ...+.+|+.+.|.|.+.|. |.|.++|+
T Consensus 103 ~~~~~~~~~~~~~~~-P~~~~~~--~~~v~~g~~v~l~C~v~g~~P~p~i~W~ 152 (207)
T 3rbs_A 103 KEAEFQRQEWIRKQG-PHFVEYL--SWEVTGECNVLLKCKVANIKKETHIVWY 152 (207)
T ss_dssp HHHHHHHHHHHHHTS-SEEEEEE--EEEEETTTEEEEEEEEESCCTTCEEEEE
T ss_pred ccccccccccccCCC-CceEecC--CcEEcCCCcEEEEEEEeCCCCCCEEEEE
Confidence 0 0012 6665544 4778899999999999999 99999997
No 9
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.68 E-value=3e-15 Score=94.79 Aligned_cols=97 Identities=24% Similarity=0.357 Sum_probs=75.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~ 78 (116)
|.++| +++|..+......+....+ ..|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+
T Consensus 35 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~n~~g~~~~~~~l~V~~~--------- 98 (284)
T 2rik_A 35 IKITW-AKDNREIRPGGNYKMTLVENTATLTVLKVTKG------DAGQYTCYASNVAGKDSCSAQLGVQEP--------- 98 (284)
T ss_dssp CEEEE-EETTEECCSSSSEEEEEETTEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECC---------
T ss_pred CEEEE-EECCEECcCCCcEEEEEcCCEEEEEEecCCcc------cCEEEEEEEEECCceEEEEEEEEccCC---------
Confidence 68999 8999988654443433333 37999999766 999999999999887553 45555543
Q ss_pred CCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 79 GPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+.....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 99 -p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~ 134 (284)
T 2rik_A 99 -PRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWY 134 (284)
T ss_dssp -CEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEE
T ss_pred -CcccccCCCceEecCCceEEEEEEEeeeCCCEEEEE
Confidence 666666546677889999999999999999999997
No 10
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.67 E-value=2.4e-15 Score=95.27 Aligned_cols=98 Identities=29% Similarity=0.482 Sum_probs=74.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
.|.+.| +++|..+......+..... ..|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+
T Consensus 128 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------- 192 (284)
T 2rik_A 128 EIKVLW-YKDETEIQESSKFRMSFVESVAVLEMYNLSVE------DSGDYTCEAHNAAGSASSSTSLKVKEP-------- 192 (284)
T ss_dssp CCEEEE-EETTEECCCSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEEECC--------
T ss_pred CCEEEE-EECCEECcCCCcEEEEEcCCEEEEEECCCCcc------cCEEEEEEEEcCCCceeEEEEEEEecC--------
Confidence 378999 8999888654333333333 36999999766 999999999999887664 55555543
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 193 --p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~~v~W~~ 228 (284)
T 2rik_A 193 --PVFRKKP-HPVETLKGADVHLECELQGTPPFQVSWHK 228 (284)
T ss_dssp --CBCCSCC-CCEEECTTCCEEEEEECBSSSCCEEEEEE
T ss_pred --CcceeCC-CcceecCCCeEEEEEEEEecCCCEEEEEE
Confidence 6655554 66778899999999999999999999973
No 11
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.67 E-value=5.7e-16 Score=107.02 Aligned_cols=97 Identities=20% Similarity=0.305 Sum_probs=76.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
.|.|+| +++|.++...........+. .|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 413 ~p~v~W-~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~A~N~~G~~~~~~~l~v~~~-------- 477 (570)
T 3b43_A 413 PFQVSW-HKDKRELRSGKKYKIMSENFLTSIHILNVDSA------DIGEYQCKASNDVGSDTCVGSITLKAP-------- 477 (570)
T ss_dssp SCCCEE-EETTEECCSSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEECCC--------
T ss_pred CCEEEE-EECCEECcCCCCEEEEEcCCEEEEEECCCChh------hCEEEEEEEEECCCeEEEEEEEEeccC--------
Confidence 378999 99999886543333333332 6899999766 999999999999998774 55555543
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 478 --P~~~~~~-~~~~~~~g~~~~l~c~~~g~p~~~v~W~ 512 (570)
T 3b43_A 478 --PRFVKKL-SDISTVVGEEVQLQATIEGAEPISVAWF 512 (570)
T ss_dssp --CEEEECC-CCBCCBTTCCEEEEEEEESCSSCCCEEE
T ss_pred --CcccccC-CCceecCCCeEEEEEEEecCCCCEEEEE
Confidence 7777666 6677788999999999999999999997
No 12
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.67 E-value=1.6e-15 Score=91.19 Aligned_cols=99 Identities=28% Similarity=0.429 Sum_probs=74.1
Q ss_pred cEEEEEccCCeeeeccc--cceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeec
Q psy11568 2 YVLLWLIRDNTVIAYVK--DLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~--~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~ 76 (116)
|.++| +++|..+.... +.+....++ .|.|.++..+ |+|.|+|.+.|..|.... ..+.|....
T Consensus 35 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~n~~~~~~~~~~l~v~~~~------ 101 (194)
T 2a38_A 35 PEVSW-FRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKA------NSGRYSLKATNGSGQATSTAELLVKAET------ 101 (194)
T ss_dssp CEEEE-EESSSBCCTTTSTTCEEEEETTEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECCC------
T ss_pred CEEEE-EECCEEcccccCCceEEEeCCCEEEEEECCCCcc------cCEEEEEEEEcCCceEeEEEEEEEccCC------
Confidence 68999 88888876432 334444444 7999999766 999999999999887654 455555310
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
. .|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 102 ~-~p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 138 (194)
T 2a38_A 102 A-PPNFVQRL-QSMTVRQGSQVRLQVRVTGIPTPVVKFY 138 (194)
T ss_dssp E-EEEEEECC-CCEEECTTEEEEEEEEEEEESCCEEEEE
T ss_pred C-CCEEEeCC-ccEEEcCCCEEEEEEEEEEecCCeEEEE
Confidence 1 15555554 6778889999999999999999999997
No 13
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.66 E-value=2.6e-15 Score=90.14 Aligned_cols=96 Identities=21% Similarity=0.442 Sum_probs=72.1
Q ss_pred cEEEEEccCCeeeeccc-cceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAYVK-DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~-~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~ 78 (116)
|.+.| +++|..+.... +......+..|.|.++..+ |+|.|+|.+.|..|.... ..+.|..+
T Consensus 37 ~~i~W-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~~l~v~~~--------- 100 (192)
T 2iep_A 37 PEISW-TRNKILIKLFDTRYSIRENGQLLTILSVEDS------DDGIYCCTANNGVGGAVESCGALQVKMK--------- 100 (192)
T ss_dssp CEEEE-EETTEECCTTCTTEEEEGGGTEEEESSCCGG------GCEEEEEEEECSSSCCEEEEEEEEEEEE---------
T ss_pred CeEEE-EECCEEccccCccEEEcCCccEEEEcCCCcc------cCeEEEEEEEcCCCceeEeEEEEEEEeC---------
Confidence 68999 88988876422 2222223447999999766 999999999999887543 44555443
Q ss_pred CCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 79 GPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 101 -p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 135 (192)
T 2iep_A 101 -PKITRPP-INVKIIEGLKAVLPCTTMGNPKPSVSWI 135 (192)
T ss_dssp -EEEEECC-CCEEEETTSCEEECCEEEEESCCEEEEE
T ss_pred -CccccCC-cceEEeCCCcEEEEEEEeccCCceEEEE
Confidence 5555554 6778889999999999999999999997
No 14
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.66 E-value=2.9e-15 Score=89.82 Aligned_cols=95 Identities=25% Similarity=0.380 Sum_probs=70.4
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGP 80 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p 80 (116)
|.++| +++|..+....+......+..|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+ |
T Consensus 34 ~~v~W-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~l~V~~~----------p 96 (192)
T 2va4_A 34 PAISW-FRNGKLIEENEKYILKGSNTELTVRNIINS------DGGPYVCRATNKAGEDEKQAFLQVFVQ----------P 96 (192)
T ss_dssp CEEEE-EETTEECCCSSSEEEETTTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEEE----------E
T ss_pred CeEEE-EECCeEcCCCccEEEeCCeeEEEEecCChh------cCcEEEEEEEccccccceEEEEEEEcc----------C
Confidence 68999 899988865333222233457999999766 999999999999876653 44555442 4
Q ss_pred ceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 81 LFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.+...+ ...+..|+.+.|.|.+.|.|.|.++|+
T Consensus 97 ~~~~~~--~~~~~~g~~v~l~C~~~~~p~~~v~W~ 129 (192)
T 2va4_A 97 HIIQLK--NETTYENGQVTLVCDAEGEPIPEITWK 129 (192)
T ss_dssp EEEEEC--CEEECTTSEEEEEEEEEEESCCEEEEE
T ss_pred cccccC--cceEEeCCeEEEEEEecCCCCCcEEEE
Confidence 444333 346677999999999999999999996
No 15
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.65 E-value=1.8e-15 Score=99.88 Aligned_cols=96 Identities=30% Similarity=0.491 Sum_probs=75.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
.|.++| +++|..+.... .+....++.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 251 ~~~v~W-~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~---------- 312 (404)
T 3p3y_A 251 TPDIAW-YKKGGDLPSDK-AKFENFNKALRITNVSEE------DSGEYFCLASNKMGSIRHTISVRVKAA---------- 312 (404)
T ss_dssp CCEEEE-EETTBCCCTTT-EEEEGGGTEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEEEEEE----------
T ss_pred CCcEEE-EECCEECCCCc-ccccccCceEEEccCCHh------HCEEEEEEEEeCCCcEEEEEEEEEeCC----------
Confidence 378999 88988875322 233444668999999766 999999999999987653 55655553
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 313 p~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~ 347 (404)
T 3p3y_A 313 PYWLDEP-KNLILAPGEDGRLVCRANGNPKPTVQWM 347 (404)
T ss_dssp EEEEECC-CCEEECTTCCEEEECEEEEESCCEEEEE
T ss_pred CeeeccC-CcceeecCCcEEEEEEccccCCCceEEE
Confidence 6666655 6788889999999999999999999997
No 16
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.65 E-value=8e-15 Score=87.95 Aligned_cols=97 Identities=19% Similarity=0.341 Sum_probs=70.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
+.+.|++.+|..+....+......+ ..|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..+
T Consensus 31 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~g~~~~~~~~l~v~~~-------- 96 (189)
T 2v44_A 31 ESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIE------DAGIYRCQATDAKGQTQEATVVLEIYQK-------- 96 (189)
T ss_dssp SEEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEECTTSCEEEEEEEEEEECC--------
T ss_pred eeEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcc------cCeEEEEEEEeCCCCcEEEEEEEEEecC--------
Confidence 3689944388777543333333333 27999999766 999999999999887654 33444432
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 97 --p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~ 131 (189)
T 2v44_A 97 --LTFREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWL 131 (189)
T ss_dssp --CEEESCC-CSEEEETTSCEEECCEEECSSCCEEEEE
T ss_pred --CceeecC-CcEEEeCCCCEEEEEEECcCCCCcEEEE
Confidence 5554444 5577889999999999999999999997
No 17
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.65 E-value=6.7e-15 Score=90.02 Aligned_cols=104 Identities=21% Similarity=0.368 Sum_probs=72.6
Q ss_pred CcEEEEEccCCeeeeccccceEEee---CCeEEecCCC-CCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeee
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALS---NGSLMFPPFP-ETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLL 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~---~~~l~i~~v~-~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~ 75 (116)
.|.|+| +++|..+........... +..|.|.++. .+ |+|.|+|.+.|..|.... ..|.|.....+ .
T Consensus 35 ~~~v~W-~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~--~ 105 (212)
T 2yd6_A 35 RPKIVW-NKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPR------DEAIYECVASNNVGEISVSTRLTVLREDQI--P 105 (212)
T ss_dssp CCEEEE-EETTEECCCTTEEEEEEGGGTEEEEEECSCCTTT------TCEEEEEEEEETTEEEEEEEEEEEECGGGC--C
T ss_pred CCEEEE-EECCcCCCCCceeEEEEcCCCceEEEEeccCCCC------CCeEEEEEEEcCCCcEEEEEEEEEeccCcc--C
Confidence 378999 899988864222112222 2269999993 55 999999999999887553 55555532100 0
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.. .|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 106 ~~-~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~v~W~ 143 (212)
T 2yd6_A 106 RG-FPTIDMGP-QLKVVERTRTATMLCAASGNPDPEITWF 143 (212)
T ss_dssp TT-CCEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEE
T ss_pred CC-cceeecCC-cceeEecCCCEEEEEEecCCCCCeEEEE
Confidence 01 15565555 6678889999999999999999999997
No 18
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.64 E-value=7.1e-15 Score=88.37 Aligned_cols=97 Identities=21% Similarity=0.329 Sum_probs=70.4
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~ 78 (116)
|.+.| ++++..+...........++ .|.|.++..+ |+|.|+|.+.|..|.... ..+.|...
T Consensus 37 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~n~~~~~~~~~~l~v~~~--------- 100 (197)
T 3lcy_A 37 PDIKW-YRFGKELIQSRKYKMSSDGRTHTLTVMTEEQE------DEGVYTCIATNEVGEVETSSKLLLQAT--------- 100 (197)
T ss_dssp CEEEE-EETTEEECCCSSEEEEESSSEEEEEEECCSGG------GCEEEEEEEECSSCEEEEEEEEEEEEE---------
T ss_pred CEEEE-EECCEECCCCccEEEEeCCCEEEEEEecCCcc------CCEEEEEEEECCCCceeEEEEEEEEcC---------
Confidence 68999 88998886433333333333 7999999766 999999999999887653 55555542
Q ss_pred CCceEec--CCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 79 GPLFRIE--PPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~~~--~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+... .+....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 101 -p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~ 138 (197)
T 3lcy_A 101 -PQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWF 138 (197)
T ss_dssp -EEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred -CCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEe
Confidence 222211 125567788999999999999999999997
No 19
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.64 E-value=7e-15 Score=90.38 Aligned_cols=101 Identities=17% Similarity=0.327 Sum_probs=73.2
Q ss_pred cEEEEEccCCeeeeccccc---eEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~---~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
|.|+| +++|..+...... .....+..|.|.++..+ |+|.|+|.+.|..|.... ..+.|.... ..
T Consensus 49 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~n~~~~~~~~~~l~V~~~~-----~~ 116 (231)
T 3ojm_B 49 PTMRW-LKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPS------DKGNYTCVVENEYGSINHTYHLDVVERS-----RH 116 (231)
T ss_dssp CEEEE-EETTEECCGGGSTTCCEEEGGGTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECCC-----CC
T ss_pred CeEEE-EECCccccccccccceeeecCcceEEEecCCcc------cCEEEEEEEecccCcccccEEEEEEcCC-----CC
Confidence 68999 8899988643222 22333458999999766 999999999999887653 555554320 01
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.|.+....+....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 117 -~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~ 153 (231)
T 3ojm_B 117 -RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWI 153 (231)
T ss_dssp -CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEE
T ss_pred -CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEE
Confidence 1344333346778889999999999999999999997
No 20
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.64 E-value=2.8e-15 Score=98.99 Aligned_cols=97 Identities=21% Similarity=0.401 Sum_probs=75.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
.|.++| +++|..+...........++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+
T Consensus 250 ~~~~~W-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~---------- 312 (403)
T 3laf_A 250 PPSFTW-LRGEEVIQLRSKKYSLLGGSNLLISNVTDD------DSGTYTCVVTYKNENISASAELTVLVP---------- 312 (403)
T ss_dssp CCEEEE-EETTEECCCSSSSEEEETTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEEE----------
T ss_pred CCeEEE-EECCeeccCCCceEEECCccEEEEeCCCHH------HCEEEEEEEEcCCCceEEEEEEEEECC----------
Confidence 378999 889888764333233445668999999766 999999999999887653 55655553
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 313 p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~v~W~ 347 (403)
T 3laf_A 313 PWFLNHP-SNLYAYESMDIEFECAVSGKPVPTVNWM 347 (403)
T ss_dssp EEEEECC-CCEECCTTCCEEECCEEEEESCCEEEEE
T ss_pred CcEeecC-cceEEecCCeEEEEEEEeeccCCEEEEE
Confidence 6665555 6677889999999999999999999997
No 21
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.64 E-value=7.4e-15 Score=88.13 Aligned_cols=96 Identities=17% Similarity=0.332 Sum_probs=69.8
Q ss_pred cEEEEEcc-CCeeeecc-ccceEEe---eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEE--EEEEeCcEeee
Q psy11568 2 YVLLWLIR-DNTVIAYV-KDLRIAL---SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF--VHVKAGSVVSL 74 (116)
Q Consensus 2 p~v~W~~~-~g~~~~~~-~~~~~~~---~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~--~~v~~~~~~~~ 74 (116)
|.++| ++ +|..+... .+..... ..+.|.|.++..+ |+|.|+|.+.|..+...+.. |.|..+
T Consensus 33 ~~v~W-~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~~l~v~~~----- 100 (191)
T 1epf_A 33 KDISW-FSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANID------DAGIYKCVVTAEDGTQSEATVNVKIFQK----- 100 (191)
T ss_dssp CEEEE-ECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTTEEEEEEEEEEEECC-----
T ss_pred ceEEE-EeCCCccccCCCCeEEEEECCCCceEEEEccCCcc------cCEEEEEEEEcCCCcceEEEEEEEeecC-----
Confidence 78999 65 88887632 2222211 1247999999766 99999999999985444333 333332
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 101 -----p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~v~W~ 135 (191)
T 1epf_A 101 -----LMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWK 135 (191)
T ss_dssp -----SEEEECC-SSEECCTTSCEEECCEEECSSCCEEEEE
T ss_pred -----ceEecCC-CcEeecCCCeEEEEEEECCCCCCEEEEE
Confidence 6665555 6778889999999999999999999996
No 22
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.63 E-value=5.7e-15 Score=89.02 Aligned_cols=101 Identities=21% Similarity=0.313 Sum_probs=71.0
Q ss_pred cEEEEEccCCeeeeccc-cceEEe-eCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeec
Q psy11568 2 YVLLWLIRDNTVIAYVK-DLRIAL-SNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~-~~~~~~-~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~ 76 (116)
|.++| +++|.++.... ..+... .++ .|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+..+ .
T Consensus 34 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~---~ 103 (197)
T 2j8h_A 34 PIVKW-YRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDD------DATVYQVRATNQGGSVSGTASLEVEVPAKI---H 103 (197)
T ss_dssp CEEEE-EETTEECCCCSSSEEEEEETTTEEEEEECSCCGG------GCSEEEEEEEETTEEEEEEEEEEEEEEEEE---C
T ss_pred CEEEE-EECCEECccCCCcEEEEEcCCCEEEEEECcCCHH------hCEEEEEEEEECCCceeEEEEEEEcCCCcC---C
Confidence 68999 88998876422 222222 344 7999999766 999999999999887653 55555542110 0
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 104 --~~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~i~W~ 139 (197)
T 2j8h_A 104 --LPKTLEGM-GAVHALRGEVVSIKIPFSGKPDPVITWQ 139 (197)
T ss_dssp --CSSCBTTB-EEEEEETTCCCEEEEEEEEESCCEEEEE
T ss_pred --CCcccccc-CeEEEeCCCEEEEEEEEEecCCCcEEEE
Confidence 12222222 5567888999999999999999999997
No 23
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.63 E-value=1.6e-14 Score=88.21 Aligned_cols=103 Identities=20% Similarity=0.359 Sum_probs=72.7
Q ss_pred cEEEEEccCCeeeec-cccceEEe-eCC--eEEecCCCC-CCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeee
Q psy11568 2 YVLLWLIRDNTVIAY-VKDLRIAL-SNG--SLMFPPFPE-TGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSL 74 (116)
Q Consensus 2 p~v~W~~~~g~~~~~-~~~~~~~~-~~~--~l~i~~v~~-~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~ 74 (116)
|.|+| +++|..+.. ..+..... .++ .|.|.++.. + |+|.|+|.+.|..|...+ ..|.|.....
T Consensus 36 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~------d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~--- 105 (212)
T 2yd1_A 36 PSIVW-RKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGR------DDAPYECVAENGVGDAVSADATLTIYEGDK--- 105 (212)
T ss_dssp CEEEE-EETTEECCTTSTTEEEEEETTTEEEEEESSCCTTT------TCSEEEEEEECSSSCEEEEEEEEEEECTTC---
T ss_pred CeEEE-EECCEECCCCcceeEEEEcCCCeEEEEEEecCCCC------cCceEEEEEEeCCCCeEEeeEEEEEecccC---
Confidence 68999 889988863 22222222 233 799999976 5 999999999999987433 4555553210
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.....|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 106 ~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~p~i~W~ 145 (212)
T 2yd1_A 106 TPAGFPVITQGP-GTRVIEVGHTVLMTCKAIGNPTPNIYWI 145 (212)
T ss_dssp SCTTCCEEEECC-CCEEEETTCCEEECCEEECSSCCEEEEE
T ss_pred CCCCCCeeEeCC-CceEeecCCeEEEEEEeccCCCCeEEEE
Confidence 000015565555 6678889999999999999999999997
No 24
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.63 E-value=1.5e-14 Score=89.62 Aligned_cols=101 Identities=18% Similarity=0.314 Sum_probs=74.0
Q ss_pred cEEEEEccCCeeeeccccc---eEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~---~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
|.|+| +++|..+...... ........|.|.++..+ |+|.|+|.+.|..|.... ..+.|.... ..
T Consensus 45 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~~~~~~~~~~~~l~V~~~~-----~~ 112 (241)
T 3grw_A 45 PSISW-LKNGREFRGEHRIGGIKLRHQQWSLVMESVVPS------DRGNYTCVVENKFGSIRQTYTLDVLERS-----PH 112 (241)
T ss_dssp CEEEE-EETTEECCGGGSTTCCEEEGGGTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECCC-----CC
T ss_pred ceeEE-EECCcccCCCCcccceeeeccceEEEEEeCCcc------cCEEEEEEEeecCCceEEEEEEEEeccC-----CC
Confidence 68999 8899988643221 23334558999999766 999999999999876653 455554310 01
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.|.+....+....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 113 -~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~ 149 (241)
T 3grw_A 113 -RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWL 149 (241)
T ss_dssp -CCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEE
T ss_pred -CceeecCCCccceecCCCEEEEEEEEecCCCCEEEEE
Confidence 1445444446777889999999999999999999997
No 25
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.62 E-value=4.6e-15 Score=97.61 Aligned_cols=98 Identities=18% Similarity=0.261 Sum_probs=72.4
Q ss_pred CcEEEEEccCCeeeec----cccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeee
Q psy11568 1 MYVLLWLIRDNTVIAY----VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLL 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~----~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~ 75 (116)
.|.|+| ++++..+.. ....+....++.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 241 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~------ 307 (388)
T 2v5m_A 241 APSFRW-YKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVE------DSGKYLCVVNNSVGGESVETVLTVTAP------ 307 (388)
T ss_dssp CCEEEE-EEECTTSSCEEECCCSSSEEEETTEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEEEEEE------
T ss_pred CCEEEE-EecCCCCcccccccccCceecccCEEEECcCCHH------HCeEEEEEEecCCCceeEEEEEEEeCC------
Confidence 378999 665432211 112234455779999999766 999999999999987653 55666553
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 308 ----p~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~i~W~~ 343 (388)
T 2v5m_A 308 ----LSAKIDP-PTQTVDFGRPAVFTCQYTGNPIKTVSWMK 343 (388)
T ss_dssp ----EEEEEES-SEEEECTTSCEEEEEEEEEECCCEEEEEE
T ss_pred ----CccccCC-CcEEecCCCCEEEEEEeccccCCeEEEEE
Confidence 5555555 67788899999999999999999999973
No 26
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.62 E-value=1e-14 Score=95.96 Aligned_cols=97 Identities=19% Similarity=0.314 Sum_probs=71.9
Q ss_pred CcEEEEEccC--Ceeeecc---ccceEEee----CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCc
Q psy11568 1 MYVLLWLIRD--NTVIAYV---KDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGS 70 (116)
Q Consensus 1 ~p~v~W~~~~--g~~~~~~---~~~~~~~~----~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~ 70 (116)
.|.|+| +++ |..+... ...++... .+.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 29 ~p~v~W-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~~- 100 (389)
T 2jll_A 29 IPEITW-KRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS------DSGRYDCEAASRIGGHQKSMYLDIEYA- 100 (389)
T ss_dssp CCEEEE-EETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGG------GCEEEEEEEECSSCEEEEEEEEEEEEE-
T ss_pred CCeEEE-EeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChh------hCEEEEEEEEeCCCCcceEEEEEEEeC-
Confidence 378999 777 8887541 12233322 247999999766 999999999999987653 55656543
Q ss_pred EeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 71 VVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 71 ~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 101 ---------P~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~i~W~ 135 (389)
T 2jll_A 101 ---------PKFISNQ-TIYYSWEGNPINISCDVKSNPPASIHWR 135 (389)
T ss_dssp ---------EEECCSC-CEEEECTTCCEEEEECEEEESCCEEEEE
T ss_pred ---------CEEecCc-ceEEeccCCEEEEEEEEEecCCCeEEEE
Confidence 5554433 5557788999999999999999999996
No 27
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.61 E-value=5.5e-15 Score=97.34 Aligned_cols=97 Identities=19% Similarity=0.342 Sum_probs=73.8
Q ss_pred cEEEEEccCCeeeeccccceEEe---eCC-eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIAL---SNG-SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~---~~~-~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~ 75 (116)
|.++| +++|..+......+... .++ .|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..+
T Consensus 242 ~~i~W-~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~~l~V~~~------ 308 (395)
T 1bih_A 242 GYPNY-FKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPE------DEGVYTCEVDNGVGKPQKHSLKLTVVSA------ 308 (395)
T ss_dssp CCCEE-EETTEECCCCTTSSEESCSSSTTSEEEESSCCGG------GCEEEEEEECCSSSSCEEEEEEEEEEEE------
T ss_pred CeEEE-EECCEEcCCCCceeEEEEecCCCceEEEccCChh------hCEEEEEEEEeCCCCceEEEEEEEEEcC------
Confidence 67899 89998886533333322 122 7999999766 999999999999988654 44555543
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+.....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 309 ----P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~ 344 (395)
T 1bih_A 309 ----PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWS 344 (395)
T ss_dssp ----EEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEE
T ss_pred ----CccccCCCcceEecCCCeEEEEEEECcccCCeeEEE
Confidence 667666633378889999999999999999999997
No 28
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.61 E-value=6.2e-15 Score=94.67 Aligned_cols=102 Identities=19% Similarity=0.241 Sum_probs=72.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEE-cCCCceEE--EEEEE--EeCcEeeeec
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRAS-NEAGVILS--RFVHV--KAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~-n~~g~~~~--~~~~v--~~~~~~~~~~ 76 (116)
|.++| +++|.++... ..+....++.|.|.++..+ |+|.|+|.+. |..|...+ ..+.+ ... ...
T Consensus 139 ~~i~W-~k~~~~l~~~-~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~----~~~ 206 (315)
T 1itb_B 139 PKLQW-YKDCKPLLLD-NIHFSGVKDRLIVMNVAEK------HRGNYTCHASYTYLGKQYPITRVIEFITLEE----NKP 206 (315)
T ss_dssp CCCEE-EETTEECCCC-SSSEEEETTEEEESSCCGG------GCEEEEEEEEEEETTEEEEEEEEEEEEEECC----CCC
T ss_pred CEEEE-EECCEECCCc-cceEeecCceEEEEeceeh------hCcEEEEEEEcCCCCcEEEEEEEEEEEEecC----CCC
Confidence 68999 9999988642 2345566779999999766 9999999999 78887643 22222 110 001
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
. .|.+...+.....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 207 ~-~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~ 245 (315)
T 1itb_B 207 T-RPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKW 245 (315)
T ss_dssp C-CCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEE
T ss_pred C-CCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEE
Confidence 1 25665444233577889999999999999999999973
No 29
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.60 E-value=7.4e-15 Score=102.36 Aligned_cols=99 Identities=19% Similarity=0.322 Sum_probs=74.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~ 78 (116)
.|.+.| +++|.++....+......++.|.|.++..+ |+|.|+|.|.|..|...+ ..|.|...
T Consensus 495 ~~~i~W-~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s~~~~l~V~~~--------- 558 (642)
T 1e07_A 495 NTTYLW-WVNGQSLPVSPRLQLSNGNRTLTLFNVTRN------DARAYVCGIQNSVSANRSDPVTLDVLYG--------- 558 (642)
T ss_pred CcEEEE-EECCEeCCCCCcEEEcCCCcEEEEeecChh------cCceEEEEeEcCCCCccCCCEEEEEEeC---------
Confidence 378999 899998865333222233568999999766 999999999999987654 55666543
Q ss_pred CCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 79 GPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 79 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
.+.+...+ ....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 559 p~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~p~v~W~~ 595 (642)
T 1e07_A 559 PDTPIISP-PDSSYLSGANLNLSCHSASNPSPQYSWRI 595 (642)
T ss_pred CCcceecC-CceeEEcCCcEEEEEEeccCCCCeEEEEE
Confidence 13344444 66788899999999999999999999973
No 30
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.59 E-value=4.2e-15 Score=95.08 Aligned_cols=107 Identities=14% Similarity=0.220 Sum_probs=73.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeee---
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLL--- 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~--- 75 (116)
.|.|+| +++|.++....+......+ ..|.|.++..+ |+|.|+|.+.|..|...+..+.+.....+...
T Consensus 31 ~~~v~W-~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~~~~ 103 (312)
T 2y23_A 31 KSEFSW-SKDYVSTEDSPRLEVESKGNKTKMTFKDLGMD------DLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHE 103 (312)
T ss_dssp TCCEEE-EETTEECTTCTTEEEEEETTEEEEEESSCCGG------GCEEEEEEESSSCCCCEEEEECHHHHHHHHHHHHH
T ss_pred CcEEEE-EECCEECCCCCCEEEEEeCCEEEEEECcCCcc------CCEEEEEEEEeCCCcEEEEEEEEeeeeeeeccccc
Confidence 378999 9999988754443333333 37999999766 99999999999988665544433210000000
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeec-CcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQ-GSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~p~i~W~ 115 (116)
..+ |.+...+.....+.+|+.+.|.|.+. +.|.|.++|+
T Consensus 104 ~~~-p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~ 143 (312)
T 2y23_A 104 HKF-PTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYI 143 (312)
T ss_dssp HHS-CBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEE
T ss_pred CCC-CccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEE
Confidence 001 44444432377888999999999999 8999999997
No 31
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=93.00 Aligned_cols=100 Identities=30% Similarity=0.511 Sum_probs=73.9
Q ss_pred CcEEEEEccCCeeeeccc-cceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeec
Q psy11568 1 MYVLLWLIRDNTVIAYVK-DLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLD 76 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~-~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~ 76 (116)
.|.|+| +++|.++.... ..+. ...++.|.|.++..+ |+|.|+|.+.|..|...+ ..+.|... .
T Consensus 137 ~~~v~W-~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~~l~v~~~------~ 203 (304)
T 2yd9_A 137 DPEITW-FKDFLPVDPSASNGRIKQLRSGALQIESSEET------DQGKYECVATNSAGVRYSSPANLYVRVQ------N 203 (304)
T ss_dssp CCEEEE-EETTEECCGGGGTTSEEECTTSCEEECSCCGG------GCEEEEEEEEETTEEEECCCEEEEEECC------C
T ss_pred CCeEEE-EECCEECcCCCCcceEEeCCCeEEEEccCCcc------cCEEEEEEEEeCCCCEEeccEEEEEEee------c
Confidence 378999 89998886422 2233 345668999999766 999999999999887653 34444421 0
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.+ |.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 204 ~~-P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 240 (304)
T 2yd9_A 204 VA-PRFSILP-MSHEIMPGGNVNITCVAVGSPMPYVKWM 240 (304)
T ss_dssp EE-EEEEECC-CCBCCCTTCCEEEEEEEEEESCCEEEEE
T ss_pred cC-CcEEecC-CceEEcCCCeEEEEEEEeeeCCCEEEEE
Confidence 11 5665555 5567788999999999999999999997
No 32
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.59 E-value=3.8e-14 Score=89.91 Aligned_cols=97 Identities=16% Similarity=0.323 Sum_probs=70.3
Q ss_pred cEEEEEccCCeeeeccc-cceEEe---eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEE--EEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVK-DLRIAL---SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF--VHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~-~~~~~~---~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~--~~v~~~~~~~~~ 75 (116)
|.++|++.+|..+.... +..... ....|.|.++..+ |+|.|+|.+.|..|...+.. |.|..+
T Consensus 33 ~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~~~n~~g~~~~~~~~l~v~~~------ 100 (291)
T 1qz1_A 33 KDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANID------DAGIYKCVVTAEDGTQSEATVNVKIFQK------ 100 (291)
T ss_dssp CEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGG------GCEEEEEEEECTTSCEEEEEEEEEEECC------
T ss_pred cEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCC------CCEEEEEEEEcCCCCeeEEEEEEEeecc------
Confidence 78999444888776322 222221 1237999999766 99999999999987654433 333332
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 101 ----~~~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~ 135 (291)
T 1qz1_A 101 ----LMFKNAP-TPQEFKEGEDAVIVCDVVSSLPPTIIWK 135 (291)
T ss_dssp ----SEEEECC-SSEEEETTSCEEECCEEECSSCCEEEEE
T ss_pred ----ccccCCC-CcccccCCCeEEEEEEeccCCCCEEEEE
Confidence 5665555 6778899999999999999999999997
No 33
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.59 E-value=2.2e-14 Score=85.77 Aligned_cols=97 Identities=26% Similarity=0.485 Sum_probs=64.2
Q ss_pred cEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EE--EEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SR--FVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~--~~~v~~~~~~~~~~~ 77 (116)
|.+.| ++++..+......+.. ..++.|.|.++..+ |+|.|+|.+.+..+... .. .+.+..+
T Consensus 32 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~-------- 96 (189)
T 2v5t_A 32 PAVSW-LYHNEEVTTISDNRFAMLANNNLQILNINKS------DEGIYRCEGRVEARGEIDFRDIIVIVNVP-------- 96 (189)
T ss_dssp CEEEE-EC-----CBCCCTTEEECTTSCEEETTCCGG------GCEEEEEEEEETTTTEEEEEEEEEEEEEE--------
T ss_pred CEEEE-EECCccceeccCCeEEEecCCCEEEeeCCHh------HCcEEEEEEEEcCCCceEEEEEEEEecCC--------
Confidence 68999 8888877643333333 34568999999766 99999999999875433 22 3333332
Q ss_pred CCCceEecCC-CeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPP-YRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~-~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+. ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 97 --p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~ 133 (189)
T 2v5t_A 97 --PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWF 133 (189)
T ss_dssp --EEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEE
T ss_pred --CCcccccccccccccCCCcEEEEEEEccCCCCeEEEE
Confidence 33333321 2445667999999999999999999997
No 34
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.58 E-value=3.8e-14 Score=90.71 Aligned_cols=103 Identities=20% Similarity=0.366 Sum_probs=67.1
Q ss_pred CcEEEEEccCCeeeeccccceE-EeeC---CeEEecCCCC-CCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeee
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRI-ALSN---GSLMFPPFPE-TGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSL 74 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~-~~~~---~~l~i~~v~~-~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~ 74 (116)
.|.|+| +++|..+... +... ...+ ..|.|.++.. + |+|.|+|.+.|..|... ...|.|......
T Consensus 35 ~~~i~W-~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~-- 104 (304)
T 2yd9_A 35 KPRVTW-NKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPR------DENVYECVAQNSVGEITVHAKLTVLREDQL-- 104 (304)
T ss_dssp CCEEEE-C-------CT-TEEEEEETTTTEEEEEECSCCTTT------TCSEEEEEEECSSCEECCEEEEEEECGGGC--
T ss_pred CCeEEE-EECCEECCCC-ceEEEEecCCCceEEEEecccccC------CCeEEEEEEECCCCeEEEEEEEEEeccccC--
Confidence 378999 9999887532 2222 2233 3699999965 5 99999999999988754 355666542100
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
....|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 105 -p~~~p~i~~~~-~~~~v~~g~~v~l~C~~~g~p~~~v~W~ 143 (304)
T 2yd9_A 105 -PSGFPNIDMGP-QLKVVERTRTATMLCAASGNPDPEITWF 143 (304)
T ss_dssp -CTTCCEEEECC-CCEEEETTSCEEECCEEECSSCCEEEEE
T ss_pred -CCCCCeeecCC-ccEEEeCCCeEEEEEECccCCCCeEEEE
Confidence 00015555555 6778889999999999999999999997
No 35
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.58 E-value=5.8e-15 Score=99.15 Aligned_cols=96 Identities=13% Similarity=0.205 Sum_probs=66.9
Q ss_pred cEEEEEccCCeeeeccccc--------eEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTVIAYVKDL--------RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~--------~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~ 73 (116)
|.|+| +++|..+...... +.....+.|.|.++..+ |+|.|+|.|.|. ...+..|.|...
T Consensus 258 p~i~W-~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~A~N~--~~~~~~L~V~~~---- 324 (423)
T 3qs7_E 258 FGLTW-ELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN------DTGYYTCSSSKH--PSQSALVTIVEK---- 324 (423)
T ss_dssp CCEEE-EESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTT------TCEEEEEEETTE--EEEEEEEEEESS----
T ss_pred cEEEE-EECCEEccccceeecccccCCceeEEEEEEEEeecCHH------HCEEEEEEEecC--CCceEEEEEEeC----
Confidence 78999 8888877532111 11222347999999766 999999999998 222345555543
Q ss_pred eeccCCCceEecC-CCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 74 LLDIQGPLFRIEP-PYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 74 ~~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ .....+.+|+++.|.|.+.|.|.|.++|+.
T Consensus 325 ------p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k 362 (423)
T 3qs7_E 325 ------GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTF 362 (423)
T ss_dssp ------CEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEE
T ss_pred ------CcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEE
Confidence 4444433 245667789999999999999999999973
No 36
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.58 E-value=9e-14 Score=90.12 Aligned_cols=99 Identities=13% Similarity=0.178 Sum_probs=69.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcC--CCceE-E----EEEEEEeCcEeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNE--AGVIL-S----RFVHVKAGSVVSL 74 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~--~g~~~-~----~~~~v~~~~~~~~ 74 (116)
|.|+| +++|..+.. .+.++...++.|.|.++..+ |+|.|+|.|.|. .|... . ..|.|....
T Consensus 159 ~~i~W-~k~~~~l~~-~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~---- 226 (329)
T 3oq3_B 159 NNITW-YKNNQELII-DGTKYSQSGQNLIIHNPELE------DSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQ---- 226 (329)
T ss_dssp CEEEE-EETTEECCC-SSSSEEEETTEEEECSCCGG------GCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCC----
T ss_pred ceEEE-EECCccCCC-CCceEecCCCEEEEeecChh------hCEEEEEEEEecccCCCceeEEEeeEEEEEECCC----
Confidence 78999 899988853 23344445789999999766 999999999997 54432 2 334444320
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCcC---Cc-eeEEeC
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSP---TP-KIEWLI 116 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P---~p-~i~W~~ 116 (116)
. .......+ ....+..|+.+.|.|.+.|.| .| .+.|+.
T Consensus 227 --~-~~~~~~~~-~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~ 268 (329)
T 3oq3_B 227 --D-HRFKLILD-PKINVTIGEPANITCTAVSTSLLVDDVLIDWEN 268 (329)
T ss_dssp --C-CCEEEECC-SEEEECTTSCEEEEEEEEETTCCTTCCEEEEEC
T ss_pred --C-CCCceecC-CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEE
Confidence 0 01122243 678889999999999999998 77 889974
No 37
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.58 E-value=2.1e-14 Score=87.14 Aligned_cols=96 Identities=19% Similarity=0.280 Sum_probs=66.8
Q ss_pred cEEEEEccCCeeee----------ccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE---EEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIA----------YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL---SRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~----------~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~---~~~~~v~~ 68 (116)
|.|.| ++++..+. .....+....++.|.|.++..+ |+|.|+|.+.|..|... ...|.|..
T Consensus 31 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~------D~G~Y~C~~~~~~g~~~~~~~~~l~V~~ 103 (212)
T 1f97_A 31 PRVEW-KFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRK------DNGEYTCMVSEEGGQNYGEVSIHLTVLV 103 (212)
T ss_dssp EEEEE-EEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGG------GCEEEEEEEEETTSSSEEEEEEEEEEEB
T ss_pred cEEEE-EECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcc------cCeEEEEEEEccCCCcccEEEEEEEEEc
Confidence 68999 66655431 1112345566689999999766 99999999999877322 24454544
Q ss_pred CcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee-ecCcCCceeEEe
Q psy11568 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA-AQGSPTPKIEWL 115 (116)
Q Consensus 69 ~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~-~~g~P~p~i~W~ 115 (116)
+ |.+...+ ....+..|+.+.|.|. +.+.|.|.++|+
T Consensus 104 ~----------p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~i~W~ 140 (212)
T 1f97_A 104 P----------PSKPTIS-VPSSVTIGNRAVLTCSEHDGSPPSEYSWF 140 (212)
T ss_dssp C----------CCCCEEE-CCSEEETTSCEEEEEECSCCBSCCEEEEE
T ss_pred C----------CCCcccC-CccccCCCCeEEEEEEcccCcCCCEEEEE
Confidence 3 3332222 2346788999999999 799999999997
No 38
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.57 E-value=1e-13 Score=85.19 Aligned_cols=99 Identities=22% Similarity=0.314 Sum_probs=70.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEee-----e
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVS-----L 74 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~-----~ 74 (116)
|.++| +++|..+... .++.|.|.++..+ |+|.|+|.+.|..|...+ ..+.|....... .
T Consensus 48 ~~v~W-~~~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~ 113 (218)
T 3k0w_A 48 VQYQW-FKMNKEIPNG-------NTSELIFNAVHVK------DAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG 113 (218)
T ss_dssp SEEEE-EETTEECTTC-------CSSEEEETTCCGG------GCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCS
T ss_pred CEEEE-EECCEECCCC-------CCCEEEEccCChh------hCeEeEEEEEcCCCCceeeEEEEEEEccCccccccccc
Confidence 68999 8888877531 2458999999766 999999999999876543 445554321000 0
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.....|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 114 ~~~~~p~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~v~W~ 153 (218)
T 3k0w_A 114 VSESKLQICVEP-TSQKLMPGSTLVLQCVAVGSPIPHYQWF 153 (218)
T ss_dssp BCCSSCEEEECC-CCEEECTTCCEEEECEEEBSSCCEEEEE
T ss_pred ccCCCceEEECC-CceeecCCCcEEEEEEecccCCCeEEEE
Confidence 000114555555 6778899999999999999999999997
No 39
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.57 E-value=8.4e-14 Score=83.31 Aligned_cols=92 Identities=18% Similarity=0.275 Sum_probs=62.7
Q ss_pred cEEEEEccCCeeeec--------cccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce-EE--EEEEEEeC
Q psy11568 2 YVLLWLIRDNTVIAY--------VKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LS--RFVHVKAG 69 (116)
Q Consensus 2 p~v~W~~~~g~~~~~--------~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~~--~~~~v~~~ 69 (116)
|.|.| ++++..+.. ....|+. ..++.|.|.++..+ |+|.|+|.+.|..|.. .. ..|.|..+
T Consensus 28 ~~i~W-~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~------D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 28 DEVRW-ERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRD------DSGTYNVTVYSTNGTRILNKALDLRILEM 100 (176)
T ss_dssp EEEEE-EETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGG------GCEEEEEEEEETTCCEEEEEEEEEEEECC
T ss_pred ccEEE-EeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccc------cCEEEEEEEEeCCCCEEEEEEEEEEEeCC
Confidence 57999 888876531 0122333 35668999999766 9999999999999876 22 33444332
Q ss_pred cEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 70 SVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 70 ~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
...|.+. ..+.++.|.|.+.|.|.|.++|+.
T Consensus 101 -------~~~p~i~---------~~~~~v~L~C~~~g~p~p~i~W~~ 131 (176)
T 1hng_A 101 -------VSKPMIY---------WECSNATLTCEVLEGTDVELKLYQ 131 (176)
T ss_dssp -------CCCCEEE---------EETTTTEEEEECSSCSSCEEEEEE
T ss_pred -------CCCCEEE---------ecCCcEEEEEEecCCCCcEEEEEE
Confidence 0012222 224569999999999999999973
No 40
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.57 E-value=2.3e-14 Score=94.16 Aligned_cols=92 Identities=22% Similarity=0.259 Sum_probs=70.7
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGP 80 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p 80 (116)
|.+.| ++++..+.. +....++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+ |
T Consensus 237 ~~i~W-~~~~~~~~~----~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~----------p 295 (382)
T 1cs6_A 237 PQIKW-RKLDGSQTS----KWLSSEPLLHIQNVDFE------DEGTYECEAENIKGRDTYQGRIIIHAQ----------P 295 (382)
T ss_dssp CEEEE-EECCSCCSC----CCSBSSSEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEEE----------E
T ss_pred CEEEE-EECCccccc----EEecCCcEEEEccCChh------hCEEEEEEEEcCCCeEEEEEEEEEecC----------C
Confidence 68999 666655432 12234558999999766 999999999999987653 55555543 6
Q ss_pred ceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 81 LFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 296 ~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~ 329 (382)
T 1cs6_A 296 DWLDVI-TDTEADIGSDLRWSCVASGKPRPAVRWL 329 (382)
T ss_dssp EEEECC-CCEEEETTCCEEEECEEEEESCCEEEEE
T ss_pred CcccCC-CccEEcCCCeEEEEEEeeeecCCEEEEE
Confidence 666555 6678889999999999999999999997
No 41
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.57 E-value=1.4e-14 Score=87.29 Aligned_cols=103 Identities=17% Similarity=0.209 Sum_probs=69.8
Q ss_pred cEEEEEccCCeeeeccccc-eEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE----EEEEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS----RFVHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~----~~~~v~~~~~~~~~ 75 (116)
|.++| ++++.++...... +.. ..++.|.|.++..+ |+|.|+|.+.|..+.... ..+.+.... ...
T Consensus 40 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 110 (201)
T 3s97_C 40 LSYRW-LLNEFPVFITMDKRRFVSQTNGNLYIANVEAS------DKGNYSCFVSSPSITKSVFSKFIPLIPIPER--TTK 110 (201)
T ss_dssp CEEEE-EESSTTCBCCCSSSEEECTTTCCEEESSCCGG------GCEEEEEEEEEGGGTEEEECCCEEEEEECCS--SCC
T ss_pred eEEEE-EECCceeeeeeCCCeEEEcCCCeEEECcCCcc------cCeEEEEEEEecCCCcchhhcccceeecccc--ccC
Confidence 78999 7887776422222 222 34568999999766 999999999997755543 222222110 000
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
..+ |.+...+ ....+..|+++.|.|.+.|.|.|.++|+
T Consensus 111 ~~~-p~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~v~W~ 148 (201)
T 3s97_C 111 PYP-ADIVVQF-KDVYALMGQNVTLECFALGNPVPDIRWR 148 (201)
T ss_dssp CEE-EEEEEEC-CCEEEETTCCEEEEEEEEEESCCEEEEE
T ss_pred CCC-CceEecC-CceEEecCCcEEEEEEccCCCCCceEEE
Confidence 111 5555555 4778889999999999999999999997
No 42
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.56 E-value=7.3e-14 Score=92.30 Aligned_cols=103 Identities=18% Similarity=0.319 Sum_probs=70.4
Q ss_pred cEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE----EEEEEEeCcEeeeec
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS----RFVHVKAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~----~~~~v~~~~~~~~~~ 76 (116)
|.++| ++++.++....+ +.. ..++.|.|.++..+ |+|.|+|.|.|..+.... ..+.+...... ..
T Consensus 133 ~~~~W-~~~~~~~~~~~~-~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~--~~ 202 (384)
T 3kld_A 133 LSYAW-IFNEYPSYQDNR-RFVSQETGNLYIAKVEKS------DVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVM--GE 202 (384)
T ss_dssp EEEEE-EETTEECCCSSS-EEECTTTCCEEESSCCGG------GCEEEEEEEEETTTTEEEECCCEEEEEEEEEEC--CC
T ss_pred eEEEE-EECCCCCEeecc-EEEEcCCCcEEEeecCHH------HCceEEEEEecccccceeeCCceEEEEccCCcc--cc
Confidence 57899 888887753222 222 34568999999766 999999999999876532 12222210000 00
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
. .|.+....+....+.+|+++.|.|.+.|.|.|.++|+
T Consensus 203 ~-~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~ 240 (384)
T 3kld_A 203 Y-EPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWR 240 (384)
T ss_dssp E-EEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred c-CCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEE
Confidence 1 1444444446778889999999999999999999996
No 43
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.56 E-value=8e-14 Score=89.30 Aligned_cols=107 Identities=13% Similarity=0.197 Sum_probs=73.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeC--cE-----
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAG--SV----- 71 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~--~~----- 71 (116)
|.++| +++|..+...........++ .|.|.++..+ |+|.|+|.+.|..|.... ..+.+... ..
T Consensus 138 ~~i~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~ 210 (317)
T 2y25_A 138 LKVNW-SHNGSAIRYSDRVKTGVTGEQIWLQINEPTPN------DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQR 210 (317)
T ss_dssp CEEEE-EESSSBCCCCSSEEEEECSSEEEEEEESCCGG------GCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHH
T ss_pred cEEEE-EECCEECCCCCCeEEeccCCEEEEEECcCCcc------cCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcc
Confidence 78999 88988876433333333333 4999999766 999999999998876653 33322110 00
Q ss_pred e---eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 72 V---SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 72 ~---~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+ .......|.+...++....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 211 ~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~ 257 (317)
T 2y25_A 211 LKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWL 257 (317)
T ss_dssp HHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEE
T ss_pred cCCcccCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEE
Confidence 0 0001112556665557788999999999999999999999997
No 44
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.56 E-value=3.2e-14 Score=87.00 Aligned_cols=97 Identities=23% Similarity=0.480 Sum_probs=69.4
Q ss_pred cEEEEEccCCeeeeccc--cceEEeeCCeE----EecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTVIAYVK--DLRIALSNGSL----MFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~--~~~~~~~~~~l----~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~ 73 (116)
|.|+| +++|..+.... ..+....++.+ .|.++..+ |+|.|+|.+.|..|...+ ..+.|...
T Consensus 39 ~~v~W-~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~------d~G~Y~C~~~n~~g~~~~~~~~l~v~~~---- 107 (217)
T 2vr9_A 39 PTIEW-FKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQ------DGGEYWCVAKNRVGQAVSRHASLQIAVL---- 107 (217)
T ss_dssp CEEEE-EETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCB------CCEEEEEEEEETTEEEECCCEEEEECEE----
T ss_pred CeEEE-EECCcCccCCCccceeEEecCCceEEEEEeccCCcc------cCceEEEEEecCCCccccccceEEEEEe----
Confidence 68999 88998886432 22344455544 46667554 999999999999886643 34444331
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
.|.+...+ ....+..|+.+.|.|.+ .|.|.|.++|+
T Consensus 108 -----~~~~~~~~-~~~~~~~g~~v~l~C~~~~g~p~~~v~W~ 144 (217)
T 2vr9_A 108 -----RDDFRVEP-KDTRVAKGETALLECGPPKGIPEPTLIWI 144 (217)
T ss_dssp -----CCSCSBCC-CCEEECTTSCEEECCBCCCEESCCEEEEE
T ss_pred -----CCCcEECC-CccEEcCCCeEEEEEECCCCCCCCeEEEE
Confidence 14444444 56778899999999999 89999999997
No 45
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.56 E-value=4.2e-14 Score=98.58 Aligned_cols=97 Identities=25% Similarity=0.387 Sum_probs=72.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~ 79 (116)
|.++| +++|+++....+......++.|.|.++..+ |+|.|+|.|.|..|...+ ..|.|...
T Consensus 318 ~~v~W-~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~s~~~~l~V~~~---------- 380 (642)
T 1e07_A 318 TTYLW-WVNNQSLPVSPRLQLSNDNRTLTLLSVTRN------DVGPYECGIQNELSVDHSDPVILNVLYG---------- 380 (642)
T ss_pred ccEEE-EECCccCCCcCCEEEeCCCCEEEEeccCcc------cCeeEEEEEeCCCCCcceeeEEEEEEcC----------
Confidence 67999 899988764333333334568999999766 999999999999987654 44545432
Q ss_pred Cce-EecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLF-RIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~-~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.. ...+ ....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 381 p~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~~~i~W~~ 417 (642)
T 1e07_A 381 PDDPTISP-SYTYYRPGVNLSLSCHAASNPPAQYSWLI 417 (642)
T ss_pred CCCCeecC-CceEecCCCcEEEEEEcCccCCCeEEEEE
Confidence 322 2333 55677889999999999999999999973
No 46
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.56 E-value=1.1e-13 Score=87.88 Aligned_cols=98 Identities=18% Similarity=0.332 Sum_probs=70.1
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEE--EEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF--VHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~--~~v~~~~~~~~~~~ 77 (116)
+.+.|++.+|..+....+......+ ..|.|.++..+ |+|.|+|.+.|..|...+.. |.|..+
T Consensus 33 ~~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~~~n~~g~~~~~~~~l~v~~~-------- 98 (291)
T 2wim_A 33 ESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIE------DAGIYRCQATDAKGQTQEATVVLEIYQK-------- 98 (291)
T ss_dssp SEEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGG------GCEEEEEEEECSSSCEEEEEEEEEEECC--------
T ss_pred CceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcc------cCEEEEEEEecccCceEEEEEEEEecCC--------
Confidence 5799943378777543333222222 27999999766 99999999999988765433 333332
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+..|+.+.|.|.+.+.|.|.++|+.
T Consensus 99 --~~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~~v~W~~ 134 (291)
T 2wim_A 99 --LTFREVV-SPQEFKQGEDAEVVCRVSSSPAPAVSWLY 134 (291)
T ss_dssp --CBCCSCC-CSEEEETTSCEEECCCCBCSSCCEEEEEC
T ss_pred --cceEeCC-CChhhcCCCCEEEEEEEccCCCCEEEEEE
Confidence 4444444 56778899999999999999999999974
No 47
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.55 E-value=4.8e-14 Score=100.54 Aligned_cols=96 Identities=23% Similarity=0.445 Sum_probs=74.3
Q ss_pred cEEEEEccCCeeeeccccceEE-ee--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LS--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
+.++| +++|+++......... .. ...|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 650 ~~i~W-~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~~~~~l~V~~~-------- 714 (816)
T 3dmk_A 650 LNIDW-TLDGQAISEDLGITTSRVGRRGSVLTIEAVEAS------HAGNFTCHARNLAGHQQFTTPLNVYVP-------- 714 (816)
T ss_dssp CEEEE-EETTBCCCGGGTCEEEEETTTEEEEEEESCCGG------GCEEEEEEEECSSCEEEEEEEECEEEE--------
T ss_pred CEEEE-EECCeEcCCCCCeeEEEcCCCeeEEEEccCChh------hCEEEEEEEEeCCccEEEEEEEEEEeC--------
Confidence 48999 9999888643332222 21 236999999766 999999999999987763 55555553
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.++|+
T Consensus 715 --P~~~~~~-~~~~v~~G~~v~l~C~~~g~P~p~i~W~ 749 (816)
T 3dmk_A 715 --PRWILEP-TDKAFAQGSDAKVECKADGFPKPQVTWK 749 (816)
T ss_dssp --EEEEECC-CCEEEETTCCEEEECEEEEESCCEEECC
T ss_pred --Cceeeec-ccceecCCCcEEEEEEEecCCCCeEEEE
Confidence 6776666 6788889999999999999999999996
No 48
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.55 E-value=2e-14 Score=92.95 Aligned_cols=101 Identities=18% Similarity=0.314 Sum_probs=72.7
Q ss_pred cEEEEEccCCeeeeccccc---eEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDL---RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~---~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
|.|+| +++|..+...... ........|.|.++..+ |+|.|+|.+.|..|.... ..|.|.... ..
T Consensus 153 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~~-----~~ 220 (334)
T 1ry7_B 153 PSISW-LKNGREFRGEHRIGGIKLRHQQWSLVMESVVPS------DRGNYTCVVENKFGSIRQTYTLDVLERS-----PH 220 (334)
T ss_dssp CEEEC-CBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGG------GCCCEEEEEEETTEEEEEEEEEEEECCC-----CS
T ss_pred CeEEE-EECCEECcccccccceecccceEEEEECCCCcc------cCEEEEEEEEeCCCCEEEEEEEEEecCC-----CC
Confidence 78999 9999887642221 11123448999999766 999999999999987653 455554320 01
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.|.+....+....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 221 -~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~ 257 (334)
T 1ry7_B 221 -RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWL 257 (334)
T ss_dssp -SCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEE
T ss_pred -CCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEE
Confidence 1444443346778889999999999999999999997
No 49
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.55 E-value=3.1e-14 Score=90.36 Aligned_cols=99 Identities=23% Similarity=0.303 Sum_probs=70.0
Q ss_pred CcEEEEEccCCeeeeccccceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce-EE--EEEEEEeCcEeeeec
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LS--RFVHVKAGSVVSLLD 76 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~~--~~~~v~~~~~~~~~~ 76 (116)
.|.++| +++|..+......+. ...++.|.|.++..+ |+|.|+|.+.|..+.. .. ..+.|..+
T Consensus 129 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~------- 194 (291)
T 1qz1_A 129 PPTIIW-KHKGRDVILKKDVRFIVLSNNYLQIRGIKKT------DEGTYRCEGRILARGEINFKDIQVIVNVP------- 194 (291)
T ss_dssp CCEEEE-EETTSCSSTTCCTTEEECTTSCEEETTCCGG------GCEEEEEEEEEGGGTEEEEEEEEEEEEEE-------
T ss_pred CCEEEE-EECCEEcccCCCceEEEccCCcEEEccCccc------cCeEEEEEEEecCCCceeeEEEEEEEecC-------
Confidence 378999 888887754333333 345668999999766 9999999999976433 33 33444332
Q ss_pred cCCCceEecC-CCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 77 IQGPLFRIEP-PYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 77 ~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ +....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 195 ---p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~ 232 (291)
T 1qz1_A 195 ---PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTK 232 (291)
T ss_dssp ---EEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEE
T ss_pred ---CcccccccccccccccCceEEEEEEEEEeCCCcEEEEE
Confidence 4444433 134566789999999999999999999973
No 50
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.54 E-value=6.8e-14 Score=89.36 Aligned_cols=102 Identities=21% Similarity=0.321 Sum_probs=71.0
Q ss_pred CcEEEEEccCCeeeeccc-cceEE-eeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeee
Q psy11568 1 MYVLLWLIRDNTVIAYVK-DLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLL 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~-~~~~~-~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~ 75 (116)
.|.|+| +++|..+.... ..+.. ..++ .|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+..+
T Consensus 33 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~--- 102 (305)
T 2nzi_A 33 KPIVKW-YRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDD------DATVYQVRATNQGGSVSGTASLEVEVPAKI--- 102 (305)
T ss_dssp CCEEEE-EETTEECCCCSSSEEEEEETTTEEEEEESSCCGG------GCSEEEEEEEETTEEEEEEEEEEECEEEEE---
T ss_pred CCeEEE-EECCEEcccCCCeEEEEECCCCEEEEEEccCChh------hCeEEEEEEEcCCCCccceEEEEEecCCcc---
Confidence 378999 88998876422 22222 2344 7999999766 999999999999887553 44555432110
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
. .|.....+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 103 ~--~~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~i~W~ 139 (305)
T 2nzi_A 103 H--LPKTLEGM-GAVHALRGEVVSIKIPFSGKPDPVITWQ 139 (305)
T ss_dssp C--CCHHHHSS-CCEEEETTCCEEEEEEEEEESCCEEEEE
T ss_pred C--CCcccccc-ccEEecCCCEEEEEEEECCCCCCEEEEE
Confidence 0 12222222 5677888999999999999999999997
No 51
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.54 E-value=4.1e-14 Score=92.95 Aligned_cols=98 Identities=20% Similarity=0.314 Sum_probs=73.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCC-CCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeecc
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPE-TGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~-~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
.|.+.| ++||.++......++...++.|.|.++.. + |+|.|+|.+.|..|...+ ..+.|...
T Consensus 36 ~~~v~W-~k~g~~~~~~~~~~~~~~~~~L~i~~~~~~~------D~G~Y~C~a~n~~g~~~s~~~~l~v~~~-------- 100 (382)
T 1cs6_A 36 PATYRW-KMNGTELKMGPDSRYRLVAGDLVISNPVKAK------DAGSYQCVATNARGTVVSREASLRFGFL-------- 100 (382)
T ss_dssp CCEEEE-EETTEECCCSTTSSEEEETTEEEEESCCHHH------HCEEEEEEEEETTEEEECCCEEEEEEEE--------
T ss_pred CCEEEE-EECCEECCcCCCccEEeeCCeEEEecccccc------cCEEEEEEEEcCCcEEEecceEEEeecc--------
Confidence 378999 89999887544456667788999999864 5 999999999999886653 44444432
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
|.+.........+.+|+.+.|.|.+ .+.|.+.+.|+
T Consensus 101 --~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~ 137 (382)
T 1cs6_A 101 --QEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWL 137 (382)
T ss_dssp --CCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEE
T ss_pred --ccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEE
Confidence 2232233356788899999999995 56789999997
No 52
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.53 E-value=2.1e-13 Score=82.26 Aligned_cols=92 Identities=16% Similarity=0.272 Sum_probs=63.3
Q ss_pred cEEEEEcc--CCeeeec---------cccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE---EEEEEE
Q psy11568 2 YVLLWLIR--DNTVIAY---------VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS---RFVHVK 67 (116)
Q Consensus 2 p~v~W~~~--~g~~~~~---------~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~---~~~~v~ 67 (116)
|.|.| ++ ++..+.. ..+......+++|.|.+++++ |+|.|+|.+.|..|.... ..|.|.
T Consensus 31 ~~i~W-~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~------DsG~Y~c~~~n~~g~~~~~~~~~L~V~ 103 (182)
T 1hnf_A 31 DDIKW-EKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTD------DQDIYKVSIYDTKGKNVLEKIFDLKIQ 103 (182)
T ss_dssp EEEEE-EEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGG------GCEEEEEEEEETTSCEEEEEEEEEEEE
T ss_pred CEEEE-EECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChh------hCEEEEEEEEeCCCceeEEEEEEEEEc
Confidence 58999 77 7777631 112223456779999999766 999999999999887542 334443
Q ss_pred eCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 68 AGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 68 ~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
.+ ...|.+.. .+..+.|.|.+.+.|.|.++|+.
T Consensus 104 ~~-------~~~P~i~~---------~~~~v~L~C~~~~~p~~~~~W~~ 136 (182)
T 1hnf_A 104 ER-------VSKPKISW---------TCINTTLTCEVMNGTDPELNLYQ 136 (182)
T ss_dssp CC-------CCCCEEEE---------ETTTTEEEEECSSCSSCEEEEEE
T ss_pred Cc-------CCCCEEEE---------ccCcEEEEeEccCCCCCEEEEEE
Confidence 32 11133322 23479999999999999999973
No 53
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.53 E-value=4.9e-14 Score=91.69 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=60.9
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCC-Cce--EEE--EEEEEeCcEeeee
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA-GVI--LSR--FVHVKAGSVVSLL 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~~--~~~--~~~v~~~~~~~~~ 75 (116)
.|.|+| +++|.++.. +.+....+..|.|.++..+ |+|.|+|.|.|.. |.. .+. .|.|..... .
T Consensus 154 ~~~v~W-~k~~~~l~~--~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~---~ 221 (349)
T 4dep_C 154 KPTITW-YMGCYKIQN--FNNVIPEGMNLSFLIALIS------NNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPK---N 221 (349)
T ss_dssp CCEEEE-EETTEECCS--CSSEEEETTEEEEESCCGG------GCEEEEEEEEEEETTEEEEEEEEEEEEEECCGG---G
T ss_pred CceEEE-eeCCEECCC--ccceeecCCEEEEeeeeec------CCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCC---C
Confidence 378999 999998853 2344555668999999766 9999999999986 544 133 333332100 0
Q ss_pred ccCCCceEecCCCe-EEEeCCCcEEEEeeec----CcCCceeEEeC
Q psy11568 76 DIQGPLFRIEPPYR-FEFSNESGGRLDCAAQ----GSPTPKIEWLI 116 (116)
Q Consensus 76 ~~~~p~~~~~~~~~-~~~~~g~~~~l~C~~~----g~P~p~i~W~~ 116 (116)
..+ |.+...+... ..+..|+.+.|.|.+. |.|.|.++|+.
T Consensus 222 ~~~-p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~ 266 (349)
T 4dep_C 222 AVP-PVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTI 266 (349)
T ss_dssp CCS-CEEC----------------CCCEEEEECCCTTCCCEEEEES
T ss_pred CCC-CeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEE
Confidence 001 4443333111 2677899999999999 67999999974
No 54
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.53 E-value=8.8e-14 Score=91.47 Aligned_cols=103 Identities=29% Similarity=0.567 Sum_probs=72.6
Q ss_pred CcEEEEEcc-CCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeecc
Q psy11568 1 MYVLLWLIR-DNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 1 ~p~v~W~~~-~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
.|.|+| ++ ||.++....+.+....++.|.|.++..+++....|+|.|+|.|.|..|...+ ..|.+...
T Consensus 33 ~p~v~W-~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~-------- 103 (388)
T 2v5m_A 33 MPEIIW-IRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVA-------- 103 (388)
T ss_dssp CCEEEE-EETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECC--------
T ss_pred CCEEEE-EcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccc--------
Confidence 378999 65 8888865444455567789999999765110011299999999999987554 33333332
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCC---ceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPT---PKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~---p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.+.|. +.++|+
T Consensus 104 --p~~~~~~-~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~ 141 (388)
T 2v5m_A 104 --QYYEADV-NKEHVIRGNSAVIKCLIPSFVADFVEVVSWH 141 (388)
T ss_dssp --CCCCCBC-CCEEEETTSCEEECCBCCTTTTTTEEEEEEE
T ss_pred --cccccCc-cceeeecCCcEEEEEECcCCCCCCcceEEEE
Confidence 4444444 5678889999999999988753 789997
No 55
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.52 E-value=1.5e-13 Score=83.31 Aligned_cols=96 Identities=21% Similarity=0.251 Sum_probs=61.7
Q ss_pred cEEEEEcc-CCeeeeccccceEEe-----eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeee
Q psy11568 2 YVLLWLIR-DNTVIAYVKDLRIAL-----SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSL 74 (116)
Q Consensus 2 p~v~W~~~-~g~~~~~~~~~~~~~-----~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~ 74 (116)
|.|.| ++ ++.......+..... .+..|.|.++..+ |+|.|+|.+.|..+.... ..|.|..+.
T Consensus 37 ~~v~W-~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~l~V~~~~---- 105 (202)
T 3bp6_B 37 IRASL-QKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVR------DSGQYRCLVICGAAWDYKYLTVKVKASY---- 105 (202)
T ss_dssp EEEEE-EECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEBCC----
T ss_pred eEEEE-EcCCCcccccCCceEEeeccccCCeeEEEECCCCHH------HCcEEEEEEEeCCCcceEEEEEEecCCC----
Confidence 68999 66 544333222211111 1147999999766 999999999999876543 455555420
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
. .|.+.. ..+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 106 --~-~p~~~~-----~~~~~g~~v~l~C~~~g~P~p~v~W~~ 139 (202)
T 3bp6_B 106 --M-RIDTRI-----LEVPGTGEVQLTCQARGYPLAEVSWQN 139 (202)
T ss_dssp --C-CEEEEE-----EECTTTCCEEEEEEEEEBSCCEEEETT
T ss_pred --C-cccEEE-----EecCCCCeEEEEEEccccCCceEEEEe
Confidence 0 122211 234569999999999999999999973
No 56
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.52 E-value=1e-13 Score=87.89 Aligned_cols=99 Identities=25% Similarity=0.465 Sum_probs=65.9
Q ss_pred CcEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EE--EEEEEeCcEeeeec
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SR--FVHVKAGSVVSLLD 76 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~--~~~v~~~~~~~~~~ 76 (116)
.|.++| ++++..+......+.. ..++.|.|.++..+ |+|.|+|.+.|..+... .. .+.+..+
T Consensus 127 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~------- 192 (291)
T 2wim_A 127 APAVSW-LYHNEEVTTISDNRFAMLANNNLQILNINKS------DEGIYRCEGRVEARGEIDFRDIIVIVNVP------- 192 (291)
T ss_dssp CCEEEE-ECC----CBCCCSSEEECTTSCEEETTCCGG------GCEEEEEEEEETTTTEEEEEEEEEEEEBC-------
T ss_pred CCEEEE-EECCccccccCCceEEEccCCCEEEEecchh------hCEEEEEEEEECCCCeeEEeeEEEEeccC-------
Confidence 378999 8888877643333333 45668999999766 99999999999875433 33 3333332
Q ss_pred cCCCceEecCC-CeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 77 IQGPLFRIEPP-YRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 77 ~~~p~~~~~~~-~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+. ....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 193 ---p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~ 230 (291)
T 2wim_A 193 ---PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR 230 (291)
T ss_dssp ---CCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEE
T ss_pred ---CccccCcccccceecCCCeEEEEEEeecCCCCeEEEEE
Confidence 44433321 13345679999999999999999999973
No 57
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.52 E-value=6.8e-14 Score=96.29 Aligned_cols=88 Identities=14% Similarity=0.155 Sum_probs=62.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
.|.|+| +++|+++..... ....+..|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 355 ~p~i~W-~k~g~~l~~~~~--~~~~~~~L~I~~v~~~------D~G~YtC~A~N~~g~~~~~~~L~V~~~---------- 415 (527)
T 3qs9_E 355 QIRCTW-TFSRKSFPCEQK--GLDNGYSISKFCNHKH------QPGEYIFHAENDDAQFTKMFTLNIRRK---------- 415 (527)
T ss_dssp CCEEEE-EETTEEEECBCC--BCSSSSEEEEECCCTT------CCSCEEEEEEETTEEEEEEEEEC--CC----------
T ss_pred CCEEEE-EECCEECcCCcc--cccCCcEEEEecCCcc------cCEEEEEEEEeCCCcEEEEEEEEEecC----------
Confidence 478999 999999864322 2234568999999766 999999999999987764 44555443
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ . ...|.|.+.|.|.|.++|++
T Consensus 416 P~i~~~~-~--------~~~l~C~a~g~P~p~i~W~~ 443 (527)
T 3qs9_E 416 PQVLAEA-S--------ASQASCFSDGYPLPSWTWKK 443 (527)
T ss_dssp CEEEECC-C--------CE---EEEECSSCCEEEEEC
T ss_pred CeEEEeC-C--------CCEEEEEEEEEcCCeEEEEE
Confidence 6665554 1 23579999999999999973
No 58
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.52 E-value=7.9e-14 Score=88.64 Aligned_cols=100 Identities=13% Similarity=0.183 Sum_probs=72.7
Q ss_pred cEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCce-EEEEEEEcCCCceEE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHST-VYRCRASNEAGVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G-~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
|.++|+++||+.+.. +.++. ..++.|.|.++..+ |+| .|+|.+.|..+...+ ..|.|... ...
T Consensus 121 ~~v~W~~~~g~~l~~--~~~~~~~~~~~L~i~~v~~~------d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~-----~~~ 187 (290)
T 2o26_X 121 SQYSLIECDGKSLPT--DLTFVPNPKAGITIKNVKRA------YHRLCVRCAAQRDGTWLHSDKFTLKVREA-----IKA 187 (290)
T ss_dssp EEEEEEETTSCCCCT--TCEEEEETTTEEEEESCCGG------GTTCEEEEEEEETTEEEECCCEEEEEECC-----CCS
T ss_pred ceEEEEeCCCcCCCC--CCceeeCCCCCEEEecccHH------HCCCEEEEEEEECCceEEeEEEEEEEEeC-----CCC
Confidence 789997789988763 23333 33568999999766 999 999999998655443 44555421 011
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCce-eEEeC
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPK-IEWLI 116 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~-i~W~~ 116 (116)
.|.+...+ ....+.+|+++.|.|.+.|.|.|. ++|+.
T Consensus 188 -~P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~ 225 (290)
T 2o26_X 188 -IPVVSVPE-TSHLLKKGDTFTVVCTIKDVSTSVNSMWLK 225 (290)
T ss_dssp -CCEEECSC-SBCCCCTTCCEEEEEEEEESSTTCEEEEEE
T ss_pred -CCccccCC-CcceEecCCcEEEEEEEecCCcceeEEEec
Confidence 26665555 455788899999999999999997 99973
No 59
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.51 E-value=5.3e-14 Score=85.22 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=65.1
Q ss_pred cEEEEEccCCeeee----------ccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE---EEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIA----------YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL---SRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~----------~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~---~~~~~v~~ 68 (116)
|.++| ++++..+. .....+....+..|.|.++..+ |+|.|+|.+.|..|... ...|.|..
T Consensus 34 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~g~~~~~~~~~l~V~~ 106 (209)
T 1nbq_A 34 PRVEW-KFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTRE------DTGTYTCMVSEEGGNSYGEVKVKLIVLV 106 (209)
T ss_dssp EEEEE-EEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTT------SCSEEEEEEEETTSSCEECCEEECCEEB
T ss_pred cEEEE-EEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHH------HCcEEEEEEecCCCCccceEEEEEEEec
Confidence 68999 66654421 1112234455578999999766 99999999999876332 23344433
Q ss_pred CcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 69 ~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
+ |.+...+ ....+..|+.+.|.|.+ .|.|.|.++|+
T Consensus 107 ~----------p~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~v~W~ 143 (209)
T 1nbq_A 107 P----------PSKPTVN-IPSSATIGNRAVLTCSEQDGSPPSEYTWF 143 (209)
T ss_dssp C----------CCCCCCC-CBSEEETTSCEEECCCCCSCBSCCEEEEE
T ss_pred C----------CcCCCcc-cccceecCCEEEEEEeCCCCCCCceeEEE
Confidence 2 3332222 33457889999999997 99999999997
No 60
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.51 E-value=3.1e-13 Score=82.08 Aligned_cols=102 Identities=25% Similarity=0.409 Sum_probs=67.4
Q ss_pred cEEEEEccCCeeeeccc----cceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVK----DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~----~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~ 75 (116)
|.++| +++|..+.... ..+....++.+.+..+...+ ....|+|.|+|.+.|..|...+ ..+.|...
T Consensus 39 ~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~------ 110 (212)
T 2v9r_A 39 PTIEW-YKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGR-KSRPDEGVYVCVARNYLGEAVSHDASLEVAIL------ 110 (212)
T ss_dssp CEEEE-EETTEECCCTTTCTTCSEEECTTSCEEESSCCCCS-SCCCSCEEEEEEEEETTEEEECCCEEEEECEE------
T ss_pred CEEEE-EECCEEeeccccccccceEEecCCcEEEEEEEecC-CCcccCeEEEEEEECCCCceeecceEEEEEec------
Confidence 68999 88888876421 12334455555554431100 0234999999999999876543 34444331
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
.+.+...+ ....+..|+.+.|.|.+ .|.|.|.++|+
T Consensus 111 ---~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~v~W~ 147 (212)
T 2v9r_A 111 ---RDDFRQNP-SDVMVAVGEPAVMECQPPRGHPEPTISWK 147 (212)
T ss_dssp ---CSSCSBCC-CCEEEETTSCEEEECBCCCEESCCEEEEE
T ss_pred ---cccceeCC-CceEecCCCcEEEEEecCCCCCCCEEEEE
Confidence 13443444 56778899999999998 89999999997
No 61
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.51 E-value=1.2e-13 Score=83.86 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=53.8
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee-
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA- 104 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~- 104 (116)
..|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+ |.+...+ ....+..|+.+.|.|.+
T Consensus 84 ~~L~i~~v~~~------D~G~Y~C~~~~~~~~~~~~~~l~V~~~----------p~~~~~~-~~~~~~~g~~v~l~C~~~ 146 (214)
T 3jz7_A 84 ASINVTNLQLS------DIGTYQCKVKKAPGVANKKFLLTVLVK----------PSGTRCF-VDGSEEIGNDFKLKCEPK 146 (214)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECC----------CBSCEEE-EESCCBTTCCEEEEEECS
T ss_pred ccEEEccCChh------hCeEEEEEEEeCCCccccEEEEEEEcC----------CCCceee-eecceecCCcEEEEecCC
Confidence 47999999766 999999999999876553 55555543 3332221 12235779999999999
Q ss_pred cCcCCceeEEe
Q psy11568 105 QGSPTPKIEWL 115 (116)
Q Consensus 105 ~g~P~p~i~W~ 115 (116)
.|.|.|.++|+
T Consensus 147 ~g~p~~~v~W~ 157 (214)
T 3jz7_A 147 EGSLPLQFEWQ 157 (214)
T ss_dssp BCCSSCEEEEE
T ss_pred CCCCCCEEEEE
Confidence 89999999997
No 62
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.51 E-value=1e-13 Score=86.20 Aligned_cols=76 Identities=9% Similarity=0.174 Sum_probs=56.0
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE------EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL------SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~------~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
..|.|.++..+ |+|.|+|.+.|..+... ...|.|... ..+ |.+....+....+.+|+.+.|
T Consensus 90 ~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~------~~~-~~~~~~~~~~~~v~~g~~v~L 156 (250)
T 2fbo_J 90 PTLRLTHVHPQ------DGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH------TPS-NNVHVSTAEVVQVDEGNDITM 156 (250)
T ss_dssp CCEEECSCCGG------GCEEEEEEEECTTCCSGGGEEEEEEEEEETTT------SCC-SCCEECCCSEEECCTTCCEEE
T ss_pred ceEEEeeCChh------hCeEEEEEeccCccCCcccccceeEEEEEecc------CCC-CeEEEecCceEEecCCCcEEE
Confidence 47999999766 99999999999876431 233444331 001 344444446677778999999
Q ss_pred EeeecCcCCceeEEe
Q psy11568 101 DCAAQGSPTPKIEWL 115 (116)
Q Consensus 101 ~C~~~g~P~p~i~W~ 115 (116)
.|.+.|.|.|.++|+
T Consensus 157 ~C~~~g~p~p~v~W~ 171 (250)
T 2fbo_J 157 TCPCTDCANANVTWY 171 (250)
T ss_dssp CCCEESCTTCEEEEE
T ss_pred EEEecCCCCCeeEEE
Confidence 999999999999997
No 63
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.51 E-value=2.9e-13 Score=82.93 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=63.9
Q ss_pred cEEEEEcc--CCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeec
Q psy11568 2 YVLLWLIR--DNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~--~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~ 76 (116)
|.++|+++ ||..+... .+.. ..++.|.|.++..+ |+|.|+|.|.|..+...+ ..|.|...
T Consensus 38 ~~v~w~~~~~~g~~~~~~--~~~~~~~~~~l~I~~v~~~------D~G~Y~C~a~n~~~~~~s~~~~l~v~~~------- 102 (213)
T 2x1w_L 38 LNVSLCARYPEKRFVPDG--NRISWDSKKGFTIPSYMIS------YAGMVFCEAKINDESYQSIMYIVVVVGY------- 102 (213)
T ss_dssp CCEEEEEETTTEEECCCS--SSCEEETTTEEEEEGGGTT------TCSEEEEEEC----CEECCCEEEEECBC-------
T ss_pred cEEEEEhhcCCCccccCC--CcccccCCccEEEccCChh------cCceEEEEEEECCeeEEEEEEEEEEeCC-------
Confidence 67899444 57666532 2223 34568999999766 999999999986544443 33444221
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCC--ceeEEeC
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPT--PKIEWLI 116 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~--p~i~W~~ 116 (116)
. .|.+...++....+.+|+++.|.|.+.|.|. +.++|+.
T Consensus 103 ~-~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~ 143 (213)
T 2x1w_L 103 R-IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY 143 (213)
T ss_dssp C-EEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEEC
T ss_pred c-ccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEe
Confidence 1 1445555545668899999999999998654 4789963
No 64
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.50 E-value=3e-13 Score=82.78 Aligned_cols=70 Identities=24% Similarity=0.273 Sum_probs=50.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|+|.+.| .|... ...|.|..+ +...... ....+..|+.+.|.|.+.|
T Consensus 81 ~L~I~~v~~~------D~G~Y~C~~~~-~~~~~~~~~l~V~~~----------~~~~~~~-~~~~~~~g~~v~L~C~~~g 142 (222)
T 3sbw_C 81 ALQITDVKLQ------DAGVYRCMISY-GGADYKRITVKVNAP----------YNKINQR-ILVVDPVTSEHELTCQAEG 142 (222)
T ss_dssp EEEESSCCGG------GCEEEEEEEES-SSEEEEEEEEEEEBC----------CCCCEEE-EEEEETTTTEEEEEEEEEE
T ss_pred EEEEcCcccc------cCeEEEEEEEe-CCCceeEEEEEEECC----------CCCCCce-eeeeecCCCcEEEEEEecC
Confidence 7999999766 99999999999 44333 244555543 2111111 1125667999999999999
Q ss_pred cCCceeEEe
Q psy11568 107 SPTPKIEWL 115 (116)
Q Consensus 107 ~P~p~i~W~ 115 (116)
.|.|.++|+
T Consensus 143 ~P~p~i~W~ 151 (222)
T 3sbw_C 143 YPKAEVIWT 151 (222)
T ss_dssp BSCCEEEEE
T ss_pred CCCCeEEEE
Confidence 999999997
No 65
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.50 E-value=1.9e-13 Score=90.11 Aligned_cols=99 Identities=27% Similarity=0.449 Sum_probs=68.6
Q ss_pred CcEEEEEccCCeeeeccccceE--EeeCCeEEec----CCCCCCCCCCCCceEEEEEEEcCCCceEEEE--EEEEeCcEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRI--ALSNGSLMFP----PFPETGFRPDVHSTVYRCRASNEAGVILSRF--VHVKAGSVV 72 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~--~~~~~~l~i~----~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~--~~v~~~~~~ 72 (116)
.|.++| +++|..+......+. ...++.|.|. ++.. .|+|.|+|.+.|..|...+.. |.|...
T Consensus 46 ~~~v~W-~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~------~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~--- 115 (404)
T 3p3y_A 46 APSFHW-TRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPE------EYEGEYQCFARNKFGTALSNRIRLQVSKS--- 115 (404)
T ss_dssp CCEEEE-EETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTT------SSCEEEEEEEECSSCEEEEEEEEEEECCC---
T ss_pred CCeEEE-EECCEEeeeecCCcceEecCCceEEEEeccCCCCc------cCCEEEEEEEEcCCCeEeeeeEEEEEecc---
Confidence 368999 899998754322222 2345566664 5544 499999999999998876533 333332
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeee-cCcCCceeEEeC
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWLI 116 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~~ 116 (116)
|.+.........+.+|+.+.|.|.+ .+.|.+.++|+.
T Consensus 116 -------p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~ 153 (404)
T 3p3y_A 116 -------PLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMS 153 (404)
T ss_dssp -------CCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEEC
T ss_pred -------CccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeC
Confidence 3333333355788899999999999 889999999973
No 66
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.49 E-value=1.7e-13 Score=92.05 Aligned_cols=94 Identities=20% Similarity=0.322 Sum_probs=59.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC---CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeec
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN---GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLD 76 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~---~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~ 76 (116)
.|.++| ++++..+..... ....+ ..|.|.++..+ |+|.|+|.|.|..|.... ..|.|..+
T Consensus 77 ~p~i~W-~~~~~~l~~~~~--~~~~~~~~~sL~I~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~~~------- 140 (423)
T 3qs7_E 77 NISCLW-VFKHSSLNCQPH--FDLQNRGVVSMVILKMTET------QAGEYLLFIQSEATNYTILFTVSIRNT------- 140 (423)
T ss_dssp SCEEEE-EETTEEECCCCB--C-----CEEEEEESSCCSS------SCSEEEEEEEC--CEEEEEEEEEEC---------
T ss_pred CCeEEE-EECCCccCccce--eccccceEEEEEEeecCcc------cCEEEEEEEEcCCCcEEEEEEEEEecC-------
Confidence 378999 777766643111 11111 15899999766 999999999999887653 44555432
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+... ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 141 ---p~~~~~--~p~~~~~~~~~~L~C~a~G~P~P~i~W~ 174 (423)
T 3qs7_E 141 ---LLYTLR--RPYFRKMENQDALVCISESVPEPIVEWV 174 (423)
T ss_dssp ------CEE--EEEEEECSSSSCEEEEEEESSCCEEEEE
T ss_pred ---cccccc--CCcEeccCCceEEEEEEeeecCCeEEEE
Confidence 333211 1123445888899999999999999997
No 67
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.49 E-value=8e-14 Score=95.95 Aligned_cols=96 Identities=11% Similarity=0.174 Sum_probs=65.5
Q ss_pred CcEEEEEccCCeeeeccccce--------EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLR--------IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVV 72 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~--------~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~ 72 (116)
.|.|+| +++|..+....... .....+.|.|.++..+ |+|.|+|.|.|. ...+..|.|...
T Consensus 257 ~p~i~W-~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~N~--~~~~~~L~V~~~--- 324 (527)
T 3qs9_E 257 GFGLTW-ELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN------DTGYYTCSSSKH--PSQSALVTIVEK--- 324 (527)
T ss_dssp CCCEEE-ECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGG------GCEEEEEEETTE--EEEEEEEEEC-----
T ss_pred CeEEEE-EECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcc------cCeEEEEEEEeC--CCceEEEEEEcc---
Confidence 378999 88888775421111 1122346999999766 999999999998 222344444432
Q ss_pred eeeccCCCceEecC-CCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 73 SLLDIQGPLFRIEP-PYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 73 ~~~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ .....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 325 -------p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~ 361 (527)
T 3qs9_E 325 -------GFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWT 361 (527)
T ss_dssp -------CEEECCCSCCEECCCTTCCCCEEEEEEEESCCEEEEE
T ss_pred -------CccccccCcccEEEcCCCeEEEEEEEEecCCCEEEEE
Confidence 4443333 23466778999999999999999999997
No 68
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.48 E-value=6.5e-13 Score=87.63 Aligned_cols=101 Identities=28% Similarity=0.404 Sum_probs=69.6
Q ss_pred cEEEEEccCCeeeeccccce-EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCC-CceEE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLR-IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA-GVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~-~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
|.++| +++|..+......+ ....++.|.|.++...+- +..|+|.|+|.+.+.. +...+ ..+.+..+
T Consensus 52 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~-~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p-------- 121 (403)
T 3laf_A 52 PVIKW-KKDGLILALGMDDRKQQLPNGSLLIQNILHSRH-HKPDEGLYQCEASLGDSGSIISRTAKVMVAGP-------- 121 (403)
T ss_dssp CEEEE-EETTEECCTTSCTTEEECTTSCEEECSCCCBTT-BCSSCEEEEEEEECGGGCEEECCCEEEEECCC--------
T ss_pred ceEEE-EECCEECccCCcccEEEecCCcEEEeeeeccCC-CCCcceEEEEEEEeCCCccEEEEEEEEEecCC--------
Confidence 67999 89999886532233 345567888888832210 1349999999999753 33333 22333222
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.++|+
T Consensus 122 --~~~~~~~-~~~~~~~G~~v~l~C~~~~~p~~~v~W~ 156 (403)
T 3laf_A 122 --LRFLSQT-ESITAFMGDTVLLKCEVIGDPMPTIHWQ 156 (403)
T ss_dssp --CEECSCC-CCEEEETTSCEEECCCEECSSCCEEEEE
T ss_pred --CccccCC-CcEEEEcCCeEEEEEEEcccCCCeEEEE
Confidence 4444444 6788899999999999999999999997
No 69
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.48 E-value=4.8e-13 Score=79.85 Aligned_cols=88 Identities=11% Similarity=0.187 Sum_probs=62.0
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCce
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLF 82 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~ 82 (116)
.+.| +++|..+....... ....+.|. +.+ |+|.|+|.+.|... ....|.|..+ |.+
T Consensus 31 ~~~W-~k~~~~l~~~~~~~---~~~~l~i~--~~~------d~G~Y~C~~~n~~~--~~~~l~V~~~----------P~~ 86 (184)
T 3b5h_A 31 GHRW-LKGGVVLKEDALPG---QKTEFKVD--SDD------QWGEYSCVFLPEPM--GTANIQLHGP----------PRV 86 (184)
T ss_dssp EEEE-ESSSEEEECTTCCC---SEEEEEEC--GGG------CCEEEEEEEESTTS--CEEEEEECCS----------CCC
T ss_pred EEEE-EeCCEEeecccccC---CcEEEEEe--chh------hCeEEEEEEECCcC--cEEEEEEecC----------Cce
Confidence 8999 88998886422110 11134444 333 99999999998432 2344545443 666
Q ss_pred EecCCCeEEEeCCCcEEEEeeecCcC-CceeEEe
Q psy11568 83 RIEPPYRFEFSNESGGRLDCAAQGSP-TPKIEWL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~~g~P-~p~i~W~ 115 (116)
...+ ....+..|+.+.|.|.+.|.| .|.+.|+
T Consensus 87 ~~~~-~~~~~~~g~~~~l~C~~~g~p~~~~i~W~ 119 (184)
T 3b5h_A 87 KAVK-SSEHINEGETAMLVCKSESVPPVTDWAWY 119 (184)
T ss_dssp EESC-SEEEECTTSCEEEEEECCCSSCCCEEEEE
T ss_pred eecC-CCcEEcCCCcEEEEEEECCCCCCCeEEEE
Confidence 6665 677888999999999999999 8999997
No 70
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=83.63 Aligned_cols=97 Identities=14% Similarity=0.148 Sum_probs=57.6
Q ss_pred cEEEEEccCCeeeeccccce-EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-E--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLR-IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-S--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~-~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~--~~~~v~~~~~~~~~~~ 77 (116)
+.+.| +++|..+....... ....++.|.|.++..+ |+|.|+|.+.|..|... + ..|.|... .
T Consensus 33 ~~~~W-~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~-------~ 98 (196)
T 2d3v_A 33 QEYRL-VKEGSPEPWDTQNPLEPKNKARFSIPSMTEH------HAGRYRCYYYSPAGWSEPSDPLELVVTGF-------Y 98 (196)
T ss_dssp CEEEE-EETTCSSCSEEECCCSSTTEEEEEESSCCGG------GCEEEEEEEEETTEECBCCCCEEEEEECS-------S
T ss_pred cEEEE-EECCCCCCcccccccCCccccEEEeccCChh------HCeEEEEEEeCCCCcCCcCccEEEEecCC-------C
Confidence 47899 88887764211110 1112347999999766 99999999999876432 2 44544431 1
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
..|.+...+ ...+.+|+++.|.|.+.+.| |.+.|+
T Consensus 99 ~~p~i~~~~--~~~v~~G~~v~L~C~~~~~p-~~~~W~ 133 (196)
T 2d3v_A 99 NKPTLSALP--SPVVTSGENVTLQCGSRLRF-DRFILT 133 (196)
T ss_dssp CCCEEEC-------------CEEEEEESSCC-SEEEEE
T ss_pred CCCeEEccC--CccccCCCcEEEEEEcCCCC-CEEEEE
Confidence 115554333 34678899999999999999 999997
No 71
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.46 E-value=1.7e-13 Score=88.86 Aligned_cols=94 Identities=19% Similarity=0.309 Sum_probs=66.1
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCce-EEEEEEEcCCCceEEEEE-EEEeCcEeeeeccCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHST-VYRCRASNEAGVILSRFV-HVKAGSVVSLLDIQG 79 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G-~y~C~a~n~~g~~~~~~~-~v~~~~~~~~~~~~~ 79 (116)
|.|+| +++|..+....+ . ..++.|.|.++..+ |+| .|+|.+.|..|......+ .+... +
T Consensus 68 ~~v~W-~k~~~~~~~~~~--~-~~~~~L~i~~v~~~------D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~--------~- 128 (329)
T 3oq3_B 68 NVVNW-EKIGKTRRPLNR--R-VKNGDLWIANYTSN------DSHRRYLCTVTTKNGDCVQGIVRSHIRK--------P- 128 (329)
T ss_dssp CEEEE-EECSSSCEECST--T-EETTEEEESSCCGG------GGGCCEEEEEECTTSCEEEEEEEEEECC--------C-
T ss_pred CeeEE-EECCCCccccCc--e-eecceEEEcCCChH------hCCCcEEEEEEeCCCceeeEEEEEEEcC--------C-
Confidence 58999 888877653222 2 55789999999766 999 999999999987554221 12111 1
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcC-CceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSP-TPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P-~p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.|.| .|.++|+
T Consensus 129 p~~~~~~-~~~~~~~G~~v~L~C~~~g~p~~~~i~W~ 164 (329)
T 3oq3_B 129 PSCIPET-YELGTHDKYGIDLYCGILYAKHYNNITWY 164 (329)
T ss_dssp CSCEEEE-EETTSSTTTCEEEECCCCSCCCCCEEEEE
T ss_pred CcEeccc-cceEEeCCCcEEEEeccCCCCCCceEEEE
Confidence 3333322 222345699999999999999 9999997
No 72
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.45 E-value=7.2e-13 Score=81.80 Aligned_cols=98 Identities=10% Similarity=0.082 Sum_probs=64.6
Q ss_pred cEEEEEccCCeeeeccccce-EEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-E--EEEEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLR-IALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-S--RFVHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~-~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~--~~~~v~~~~~~~~~ 75 (116)
|.+.| +++|..+....... ....++ .|.|.++..+ |+|.|+|.+.|..|... + ..|.|...
T Consensus 37 ~~~~W-~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~------ 103 (218)
T 1uct_A 37 YLTQL-MIIKNSTYREIGRRLKFWNETDPEFVIDHMDAN------KAGRYQCQYRIGHYRFRYSDTLELVVTGL------ 103 (218)
T ss_dssp SEEEE-EEEETTEEEECSEECC----CCCEEEECSCCGG------GCEEEEEEEEETTTEEEECCCEEEEEECS------
T ss_pred CEEEE-EECCCcccccccccCCCCcceeeEEEEcccccc------cCEEEEEEEEcCCCceeecCCEEEEEcCc------
Confidence 68999 88877664211110 112344 8999999766 99999999999876332 2 34444431
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...|.+...+ ...+.+|+++.|.|.+.+.|.|.+.|+
T Consensus 104 -~~~P~i~~~p--~~~v~~G~~v~L~C~~~~~~~~~~~W~ 140 (218)
T 1uct_A 104 -YGKPFLSADR--GLVLMPGENISLTCSSAHIPFDRFSLA 140 (218)
T ss_dssp -SCCCEEEESS--CSEECTTCCCEEEEECSSSCCSEEEEE
T ss_pred -ccCCEEEeCC--CCccCCCCCEEEEEeCCCCCCCEEEEE
Confidence 1125555444 346789999999997778888999996
No 73
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.45 E-value=1e-12 Score=85.47 Aligned_cols=100 Identities=19% Similarity=0.227 Sum_probs=68.8
Q ss_pred cEEEEEccCCee------ee-ccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTV------IA-YVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~------~~-~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~ 73 (116)
|.|+| ++++.. +. .....+....++.|.|.++..+ |+|.|+|.+.|..+.... ..|.|.....
T Consensus 48 ~~i~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~-- 118 (349)
T 4dep_C 48 LTLIW-YWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLN------DTGNYTCMLRNTTYCSKVAFPLEVVQKDS-- 118 (349)
T ss_dssp CEEEE-EEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEEEECCCT--
T ss_pred ceEEE-EECCCCCcccccccccccCceEeecCCEEEEccCChh------hCEEEEEEEecCCceEEEEEEEEEecCCc--
Confidence 78999 776631 11 0134456667889999999766 999999999999876663 5565554200
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeee-----cCcCCceeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAA-----QGSPTPKIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~-----~g~P~p~i~W~ 115 (116)
.. +..... +....+..|+.+.|.|.+ .|.|.|.++|+
T Consensus 119 ---~~-~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~ 160 (349)
T 4dep_C 119 ---CF-NSPMKL-PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWY 160 (349)
T ss_dssp ---TS-CCSCCC-CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEE
T ss_pred ---cc-Cccccc-CcceeeecCccEEEEcCCCcccccCCCCceEEEe
Confidence 00 111111 245677889999999985 78999999997
No 74
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.45 E-value=8.7e-13 Score=90.06 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=70.1
Q ss_pred EEEEEccCCeee--eccccce-----EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeee
Q psy11568 3 VLLWLIRDNTVI--AYVKDLR-----IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSL 74 (116)
Q Consensus 3 ~v~W~~~~g~~~--~~~~~~~-----~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~ 74 (116)
.++| +++|..+ ....... .....+.|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..+
T Consensus 243 ~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~~----- 310 (524)
T 2ec8_A 243 YSTW-KRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVN------DSGVFMCYANNTFGSANVTTTLEVVDK----- 310 (524)
T ss_dssp EEEE-EETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTT------TCEEEEEEEECSSCEEEEEEEEEEESS-----
T ss_pred EEEE-EeCCCCCccccccccccccCCccceEEEEEECCCCHH------HCEEEEEEEEecCCceEEEEEEEEecc-----
Confidence 3999 8887773 2111111 1223457999999766 999999999999987764 55555543
Q ss_pred eccCCCceEecC--CCeEEEeCCCcEEEEeeecCcCCce-eEEeC
Q psy11568 75 LDIQGPLFRIEP--PYRFEFSNESGGRLDCAAQGSPTPK-IEWLI 116 (116)
Q Consensus 75 ~~~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~g~P~p~-i~W~~ 116 (116)
|.+...+ .....+.+|+.+.|.|.+.|.|.|. ++|+.
T Consensus 311 -----p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k 350 (524)
T 2ec8_A 311 -----GFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIY 350 (524)
T ss_dssp -----CEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEES
T ss_pred -----CceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEE
Confidence 5554433 2578889999999999999999999 99974
No 75
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.45 E-value=4.1e-13 Score=81.95 Aligned_cols=93 Identities=14% Similarity=0.153 Sum_probs=59.5
Q ss_pred cEEEEEccCCeeeeccccceEEe-eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIAL-SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~-~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
|.|+|+...+.++. +..... .++.|.|.++..+ |+|.|.|.|.|..|.... ..|.|..+
T Consensus 31 p~i~W~~~~~~~~~---~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~l~V~~~---------- 91 (202)
T 1vca_A 31 PFFSWRTQIDSPLN---GKVTNEGTTSTLTMNPVSFG------NEHSYLCTATCESRKLEKGIQVEIYSF---------- 91 (202)
T ss_dssp CEEEEEETTCCCCS---SEEEEETTEEEEEESSCCGG------GCSEEEEEEEETTEEEEEEEEEEEEBC----------
T ss_pred CeEEEECCCCCCcc---ceEEEcCCccEEEECcCCHH------HCEEEEEEEEECCceEeeEEEEEEEeC----------
Confidence 78999432333321 111111 2236999999766 999999999999876543 45555543
Q ss_pred Cc-eEecCCCeEEEeCCCcEEEEeeecCcCC---ceeEEe
Q psy11568 80 PL-FRIEPPYRFEFSNESGGRLDCAAQGSPT---PKIEWL 115 (116)
Q Consensus 80 p~-~~~~~~~~~~~~~g~~~~l~C~~~g~P~---p~i~W~ 115 (116)
|. ....+ . ..+.+|+.+.|.|.+.|.|+ +.++|+
T Consensus 92 p~~~~~~~-~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~ 129 (202)
T 1vca_A 92 PKDPEIHL-S-GPLEAGKPITVKCSVADVYPFDRLEIDLL 129 (202)
T ss_dssp CSCCEEEE-S-SCEETTSCEEEEEEEEEEBSGGGEEEEEE
T ss_pred CCCCEeCC-c-eEEcCCCCEEEEEEECCcCCCCCeEEEEE
Confidence 22 22222 2 45688999999999998643 368996
No 76
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.44 E-value=9e-14 Score=91.55 Aligned_cols=96 Identities=21% Similarity=0.261 Sum_probs=68.7
Q ss_pred cEEEEEccCCeeeecccc-ceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAYVKD-LRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~-~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~ 78 (116)
|.++| +++|..+..... ......++.|.|.++..+ |+|.|+|.+.|..|...+ ..+.+... .
T Consensus 37 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~s~~~~l~v~~~------~-- 101 (395)
T 1bih_A 37 VKYSW-KKDGKSYNWQEHNAALRKDEGSLVFLRPQAS------DEGHYQCFAETPAGVASSRVISFRKTYL------I-- 101 (395)
T ss_dssp CEEEE-EESSSBCCTTTTTEEECTTSCCEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEEE------E--
T ss_pred ceEEE-EECCcCcccccceEEEecCCceEEEecCCCC------CCcEEEEEEEeCCCeEEeEEEEEEEEEe------e--
Confidence 78999 889988865332 223334668999999766 999999999999887653 33333321 0
Q ss_pred CCceEecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 79 GPLFRIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
.|.+ .+ ....+.+|+.+.|.|.+ .+.|.|.++|+
T Consensus 102 ~p~~--~~-~~~~~~~G~~v~l~C~~~~~~p~~~v~W~ 136 (395)
T 1bih_A 102 ASPA--KT-HEKTPIEGRPFQLDCVLPNAYPKPLITWK 136 (395)
T ss_dssp CCCC--EE-EEECCBTTEEEEECCCCCEEESCCEEEEE
T ss_pred cCCc--CC-cceeeeeCCcEEEEecCCCCCCCCeEEEE
Confidence 1333 22 35566789999999996 88999999997
No 77
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.44 E-value=3.9e-13 Score=81.28 Aligned_cols=97 Identities=12% Similarity=0.168 Sum_probs=64.2
Q ss_pred cEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc-eEE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV-ILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-~~~--~~~~v~~~~~~~~~~~ 77 (116)
|.+.| +++|..+......... ..++.|.|.++..+ |+|.|+|.+.|..|. ..+ ..|.|... .
T Consensus 33 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~-------~ 98 (196)
T 3p2t_A 33 REYRL-DKEESPAPWDRQNPLEPKNKARFSIPSMTED------YAGRYRCYYRSPVGWSQPSDPLELVMTGA-------Y 98 (196)
T ss_dssp CEEEE-EETTSCSCSEEECCCSSSSEEEEEESSCCGG------GCEEEEEEEEETTEEBCCCCCEEEEEECS-------S
T ss_pred CEEEE-EECCCCCcccccccccCCceEEEEeccCCcc------cCceEEEEEeCCCcccCCCccEEEEecCC-------C
Confidence 67899 8888776421110000 12347999999766 999999999999873 222 44545431 1
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
..|.+...+ .. .+.+|+++.|.|.+.+ +.+.+.|+
T Consensus 99 ~~p~~~~~~-~~-~v~~G~~v~L~C~~~~-~~~~~~w~ 133 (196)
T 3p2t_A 99 SKPTLSALP-SP-LVTSGKSVTLLCQSRS-PMDTFLLC 133 (196)
T ss_dssp CCCEEEEES-CS-EECTTCCEEEEEEEEE-EEEEEEEE
T ss_pred CCCEEEeCC-cc-eecCCCeEEEEEecCC-CCCEEEEE
Confidence 125555554 22 6688999999999988 45688886
No 78
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.44 E-value=1.3e-13 Score=89.33 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=69.6
Q ss_pred cEEEEEccCCeee--eccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVI--AYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~--~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~ 78 (116)
|.|+| +++|..+ ......+....++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|...
T Consensus 55 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~~~n~~g~~~~~~~l~V~~~--------- 118 (339)
T 3o4o_C 55 INLTW-HKNDSARTVPGEEETRMWAQDGALWLLPALQE------DSGTYVCTTRNASYCDKMSIELRVFEN--------- 118 (339)
T ss_dssp CBCCC-EESSCCSCCSCCSSSCEEEETTEEEESSBCTT------CCEEEECCEEETTEEEEEEEEEEEECS---------
T ss_pred ceEEE-EECCCCcccCccccccEEeeCCeEEECCCCcc------cCEEEEEEEECCcceEEEEEEEEEEcC---------
Confidence 57899 8888774 32224456677889999999766 999999999999875553 45555542
Q ss_pred CCceE-ecCCCeEEEeCCCcEEEEee-----ecCcCCceeEEe
Q psy11568 79 GPLFR-IEPPYRFEFSNESGGRLDCA-----AQGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~-~~~~~~~~~~~g~~~~l~C~-----~~g~P~p~i~W~ 115 (116)
+... ........+..|+.+.|.|. +.|.|.|.++|+
T Consensus 119 -~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~ 160 (339)
T 3o4o_C 119 -TDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWY 160 (339)
T ss_dssp -CGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCE
T ss_pred -CCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEe
Confidence 1110 00012346788999999999 889999999997
No 79
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.43 E-value=3.3e-12 Score=77.31 Aligned_cols=97 Identities=16% Similarity=0.280 Sum_probs=61.8
Q ss_pred cEEEEEccCCeeeecc--------------cc--ceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EE
Q psy11568 2 YVLLWLIRDNTVIAYV--------------KD--LRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RF 63 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~--------------~~--~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~ 63 (116)
+.|.| +++|..+... +. .|.. ..++.|.|.+++.+ |+|.|.|.+.+..+.... ..
T Consensus 29 ~~v~W-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~ 101 (193)
T 2if7_A 29 NFITW-LFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKME------DTGSYRAQISTKTSAKLSSYT 101 (193)
T ss_dssp CEEEE-EETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGG------GCEEEEEEEECSSCEEEEEEE
T ss_pred cEEEE-EECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcc------cCceEEEEEEecCCCeEEEEE
Confidence 58999 7777655310 00 1322 24568999999766 999999999999876543 44
Q ss_pred EEEEeCcEeeeeccCCCceEecCCCeEEEeCCC-cEEEEeeecCc-CCceeEEe
Q psy11568 64 VHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNES-GGRLDCAAQGS-PTPKIEWL 115 (116)
Q Consensus 64 ~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~-~~~l~C~~~g~-P~p~i~W~ 115 (116)
|.|..+.. .|.+...+ . ....|. ++.|.|.+.|. |.|.++|+
T Consensus 102 L~V~~~~~-------~p~i~~~~-~--~~~~g~~~v~L~C~~~g~~p~p~i~W~ 145 (193)
T 2if7_A 102 LRILRQLR-------NIQVTNHS-Q--LFQNMTCELHLTCSVEDADDNVSFRWE 145 (193)
T ss_dssp EEEECCCE-------EEEEEECC-C-----CSSEEEEEEEEEESCCTTCEEEEE
T ss_pred EEEEccCC-------CCeEecCc-e--eecCCCceEEEEEEEecCCCceEEEEE
Confidence 55543200 13333332 1 123455 79999999995 58999997
No 80
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.43 E-value=1.6e-12 Score=82.29 Aligned_cols=99 Identities=9% Similarity=0.084 Sum_probs=68.3
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcC-CCceE-EEEEEEEeCcEeeeeccCCC
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNE-AGVIL-SRFVHVKAGSVVSLLDIQGP 80 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~-~g~~~-~~~~~v~~~~~~~~~~~~~p 80 (116)
.++|++++|..+..... .....++.|.|.++..+ |+|.|+|.+.+. .+... ...|.|... ... .|
T Consensus 121 ~v~W~~~~~~~~~~~~~-~~~~~~~~L~i~~v~~~------d~G~Y~C~a~~~~~~~~~~~~~l~V~~~-----~~~-~p 187 (289)
T 3ejj_X 121 SVSLMREGGRQVLRKTV-YFFSPWRGFIIRKAKVL------DSNTYVCKTMVNGRESTSTGIWLKVNRV-----HPE-PP 187 (289)
T ss_dssp SEEEEEGGGEECCTTCC-EEEETTTEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEESS-----CCC-CC
T ss_pred EEEEEecCCeecCCCcc-EEECCCCCEEEeecccc------cCEEEEEEEEeCCCccccccEEEEEEEC-----CCC-CC
Confidence 38996678887753222 12344668999999766 999999999943 33332 244555421 001 26
Q ss_pred ceEecCCCeEEEeCCCcEEEEeeecC-cCCceeEEe
Q psy11568 81 LFRIEPPYRFEFSNESGGRLDCAAQG-SPTPKIEWL 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~p~i~W~ 115 (116)
.+...+ ....+..|+++.|.|.+.+ .|.|.++|+
T Consensus 188 ~i~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~i~W~ 222 (289)
T 3ejj_X 188 QIKLEP-SKLVRIRGEAAQIVCSATNAEVGFNVILK 222 (289)
T ss_dssp EEEEES-SSEECCSSSCEEEEEEEEESSSCCEEEEE
T ss_pred eEEecC-CceEEEeCCcEEEEEEeCCCCCceEEEEE
Confidence 666665 5666778999999999998 799999997
No 81
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.42 E-value=1.4e-13 Score=88.16 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=65.8
Q ss_pred CcEEEEEccCCeeeecccc---ceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeec
Q psy11568 1 MYVLLWLIRDNTVIAYVKD---LRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLD 76 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~---~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~ 76 (116)
.|.|+| ++++.++..... .......+.|.|..+..+ |+|.|+|.|.|..+... ...+.+...
T Consensus 144 ~~~i~W-~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~------d~g~Y~C~a~n~~~~~~~~~~~~l~V~------- 209 (308)
T 4fom_A 144 VAHIDW-EGDLGEMESTTTSFPNETATIISQYKLFPTRFA------RGRRITCVVKHPALEKDIRYSFILDIQ------- 209 (308)
T ss_dssp CCEEEE-CCCSSBCCEEEEECTTSCEEEEEEEEECCCGGG------TTCEEEEEEECTTCSSCEEEEEECCCC-------
T ss_pred CceEEE-EECCcccccccceeeeecccccccceEEeeeec------CCccEEEEEEccCCCCceEEeEEEEEe-------
Confidence 378999 888887753110 001111225888888665 99999999999876544 233322211
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc-eeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP-KIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p-~i~W~ 115 (116)
. .|.+...+.....+..|+.+.|.|.+.|.|.| .+.|+
T Consensus 210 ~-~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~ 248 (308)
T 4fom_A 210 Y-APEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWS 248 (308)
T ss_dssp E-EEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECC
T ss_pred c-CCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEE
Confidence 0 15554444345566778999999999999999 68997
No 82
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.42 E-value=7.6e-14 Score=90.23 Aligned_cols=104 Identities=22% Similarity=0.348 Sum_probs=27.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEee-------
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVS------- 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~------- 73 (116)
|.++| +++|..+.. ..++...++.|.|.++..+ |+|.|+|.+.|. |... ...|.|.......
T Consensus 39 ~~v~W-~k~g~~~~~--~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~ 108 (334)
T 1ry7_B 39 GPTVW-VKDGTGLVP--SERVLVGPQRLQVLNASHE------DSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGED 108 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceEE-EECCeeCCC--cccEEeccceEEEeecccc------cCEEEEEEEEeC-CeEEEEEEEEEeccCcccccccccc
Confidence 68999 899988753 2344455678999999766 999999999998 5444 2445544310000
Q ss_pred ------eeccCCCceEecC---CCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 74 ------LLDIQGPLFRIEP---PYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 74 ------~~~~~~p~~~~~~---~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
....+ |.+.... .....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 109 ~~~~~~~~~~~-p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~ 159 (334)
T 1ry7_B 109 EAEDTGVDTGA-PYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLK 159 (334)
T ss_dssp ----------C-CCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCB
T ss_pred ccccccccCCC-CEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEE
Confidence 00001 3332211 134678889999999999999999999973
No 83
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.42 E-value=4.1e-13 Score=87.01 Aligned_cols=101 Identities=16% Similarity=0.223 Sum_probs=69.9
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCce----E-EEEEEEEeCcEeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI----L-SRFVHVKAGSVVSL 74 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~----~-~~~~~v~~~~~~~~ 74 (116)
|.++| +++|..+..... ++.... +.|.|.++..+ |+|.|+|.+.|..|.. . ...|.|....
T Consensus 155 ~~v~W-~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~---- 222 (339)
T 3o4o_C 155 VKIQW-YKDSLLLDKDNE-KFLSVRGTTHLLVHDVALE------DAGYYRCVLTFAHEGQQYNITRSIELRIKKKK---- 222 (339)
T ss_dssp CCBCC-EESSCBCCTTCS-SEEECTTSSEEEESSCCGG------GCEEEEEEEECCBTTBCCEEEEEEEEEEECCC----
T ss_pred ceEEE-ecCCeeCCCCCc-eeEEcCCcceEEEcccCHh------hCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC----
Confidence 67899 889988864322 333332 47999999766 9999999999987642 2 2445444320
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeee---cCcC-CceeEEeC
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAA---QGSP-TPKIEWLI 116 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~---~g~P-~p~i~W~~ 116 (116)
... .|.+... +....+..|+++.|.|.+ .|.| .|.+.|+.
T Consensus 223 ~~~-~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~ 266 (339)
T 3o4o_C 223 EET-IPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA 266 (339)
T ss_dssp CCC-CCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEES
T ss_pred CCC-CCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEE
Confidence 001 1455444 366677889999999999 8999 88999973
No 84
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.42 E-value=6.6e-13 Score=79.97 Aligned_cols=96 Identities=14% Similarity=0.132 Sum_probs=58.6
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecC-CCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEee--e---
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVS--L--- 74 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~-v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~--~--- 74 (116)
+.|+| ++||.++... .++.|.|.+ +..+ |+|.|+|.|.|..|.... ..+.|....... .
T Consensus 27 ~~i~W-~k~g~~l~~~-------~~~~L~I~~~~~~~------D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~ 92 (186)
T 1jbj_A 27 ENLKW-EKNGQELPQK-------HDKHLVLQDFSEVE------DSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKK 92 (186)
T ss_dssp TTCEE-EETTEEECSC-------CCSEEEEESCCTTT------SCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCC
T ss_pred CceEE-EECCEECCCC-------CCCEEEECCCCccc------cCEEEEEEEEeCCCcEEEEEEEEEecccccccccccc
Confidence 45899 9999988632 345899999 8665 999999999999887432 323222110000 0
Q ss_pred ---e-ccCCCceE---ecCCCeE---EEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 75 ---L-DIQGPLFR---IEPPYRF---EFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 75 ---~-~~~~p~~~---~~~~~~~---~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
. ..+ |.+. ....... .+..|+++.|.|.+ |.|.++|+
T Consensus 93 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~ 139 (186)
T 1jbj_A 93 DDAKKDDA-KKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWL 139 (186)
T ss_dssp CCCSCCSS-STTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEE
T ss_pred cccccCCc-cccccccccccccccceecCCCCeEEEEeeC---CCCeEEEE
Confidence 0 000 0000 0000111 23389999999998 88999997
No 85
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.42 E-value=2.3e-12 Score=78.71 Aligned_cols=84 Identities=20% Similarity=0.324 Sum_probs=60.7
Q ss_pred EEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceE
Q psy11568 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFR 83 (116)
Q Consensus 4 v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~ 83 (116)
++| +++|..+.. ..+.|.|.++..+ |+|.|+|.+.|..... ...|.|... |.+.
T Consensus 40 v~W-~k~g~~l~~--------~~~~L~i~~v~~~------D~G~Y~C~a~n~~~s~-~~~l~V~~~----------p~~~ 93 (204)
T 3sgj_C 40 TQW-FHNESLISS--------QASSYFIDAATVD------DSGEYRCQTQLSTLSD-PVQLEVHIG----------WLLL 93 (204)
T ss_dssp EEE-EETTEEESC--------CSSEEEESSCCGG------GCEEEEEEETTSBCCC-CEEEEEECS----------SEEE
T ss_pred EEE-EECCEEccc--------CccEEEEeccccc------CCEEEEEEeCCCcccc-cEEEEEecC----------ceEe
Confidence 899 889887753 1268999999766 9999999999853222 234444432 4444
Q ss_pred ecCCCeEEEeCCCcEEEEeeecCc-CCceeEEe
Q psy11568 84 IEPPYRFEFSNESGGRLDCAAQGS-PTPKIEWL 115 (116)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~C~~~g~-P~p~i~W~ 115 (116)
..+ . ..+.+|+++.|.|.+.+. |.|.++|+
T Consensus 94 ~~~-~-~~v~~G~~v~L~C~~~~~~p~~~v~W~ 124 (204)
T 3sgj_C 94 QAP-R-WVFKEEDPIHLRCHSWKNTALHKVTYL 124 (204)
T ss_dssp ECS-C-SEEETTCCEEEEEEEGGGCCCEEEEEE
T ss_pred cCC-c-eeEeCCCcEEEEEEecCCCCCceEEEE
Confidence 444 2 567789999999999776 56889996
No 86
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.41 E-value=4.6e-13 Score=86.07 Aligned_cols=99 Identities=15% Similarity=0.233 Sum_probs=64.7
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEee
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVS 73 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~ 73 (116)
.|.++| ++++..+...... ....++ .|.|.....+ |+|.|+|.|.|..+... ...+.+...
T Consensus 147 ~~~i~W-~~~~~~~~~~~~~-~~~~~~~~~~~s~l~i~~~~~~------d~g~Y~C~a~n~~~~~~~~~~~~l~V~---- 214 (313)
T 4fqp_A 147 PAQITW-HSDLGGMPNTSQV-PGFLSGTVTVTSLWILVPSSQV------DGKNVTCKVEHESFEKPQLLTVNLTVY---- 214 (313)
T ss_dssp CCEEEE-EETTCCEEEEEEE-ECSSTTCEEEEEEEEECCCGGG------TTCEEEEEEECTTSSSCEEEEEECCBC----
T ss_pred CcEEEe-ecCCcccccccee-eeecccccccceeeeecccccc------cCeeEEEEEEccCcCccceeeeecccc----
Confidence 378999 8887776531111 111122 3777777555 99999999999866543 333322221
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc-eeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP-KIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p-~i~W~ 115 (116)
.+ |.+...+.....+..|+.+.|.|.+.|.|.| .++|+
T Consensus 215 ---~~-P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~ 253 (313)
T 4fqp_A 215 ---YP-PEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWS 253 (313)
T ss_dssp ---EE-EEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEE
T ss_pred ---cC-CccccccccceeecCCCeEEEEEEecCCCCCcEEEEE
Confidence 11 5655554455566778999999999999999 69997
No 87
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.41 E-value=1.1e-12 Score=86.41 Aligned_cols=84 Identities=19% Similarity=0.213 Sum_probs=43.4
Q ss_pred CcEEEEEccCCeeeec--cccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc
Q psy11568 1 MYVLLWLIRDNTVIAY--VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~--~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~ 77 (116)
+|.|+| ++++..+.. ....++...+++|.|.++..+ |+|.|+|.|.|..|.... ..|.|...
T Consensus 274 ~p~i~W-~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~~~-------- 338 (361)
T 2xot_A 274 GMTKVW-VSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVE------DGGVYTCYAMGETFNETLSVELKVYNF-------- 338 (361)
T ss_dssp TCEEEE-ECTTSCBCCSCCSSSSEEEETTEEEESSCCTT------SCEEEEEEEECSSCEEEEEEEEEEESS--------
T ss_pred CCeEEE-EeCCCeeEeecccCCceEeecCeEEEeecCcc------cCEEEEEEEecCCCccEEEEEEEEEee--------
Confidence 478999 665544332 122244447789999999766 999999999999887764 44444321
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeE
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIE 113 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~ 113 (116)
+ .+|+.+.+.|.+.|.|.|.|.
T Consensus 339 --~------------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 339 --T------------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp --C------------CC-------------------
T ss_pred --e------------ccCCceEEEEEeCCCCCCccc
Confidence 2 457899999999999999874
No 88
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.41 E-value=7.8e-13 Score=80.05 Aligned_cols=97 Identities=14% Similarity=0.218 Sum_probs=65.3
Q ss_pred cEEEEEccCCeeeeccccce-EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCC-Cc-e-E-EEEEEEEeCcEeeeec
Q psy11568 2 YVLLWLIRDNTVIAYVKDLR-IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA-GV-I-L-SRFVHVKAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~-~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~-~-~-~~~~~v~~~~~~~~~~ 76 (116)
+.++| +++|..+....... ....++.|.|.++..+ |+|.|+|.+.|.. |. . . ...|.|...
T Consensus 33 ~~~~W-~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~------- 98 (198)
T 1ugn_A 33 QEYRL-YREKKTAPWITRIPQELVKKGQFPIPSITWE------HTGRYRCYYGSDTAGRSESSDPLELVVTGA------- 98 (198)
T ss_dssp CCEEE-EESSSCCHHHHTSCHHHHTTTEEEESSCCGG------GCEEEEEEEEETTTEECCCCCCEEEEEECS-------
T ss_pred cEEEE-EECCccccccccccccCCcccEEEECCCCHH------HCeEEEEEEECCCCCcccCCccEEEEEccc-------
Confidence 45899 88888764211111 1224568999999766 9999999999987 52 2 1 244555431
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...|.+...+ ...+.+|+++.|.|.+.+. .|.++|+
T Consensus 99 ~~~p~i~~~~--~~~v~~G~~v~L~C~~~~~-~~~v~W~ 134 (198)
T 1ugn_A 99 YIKPTLSAQP--SPVVNSGGNVTLQCDSQVA-FDGFILC 134 (198)
T ss_dssp SCCCEEEEES--CSEEETTCCEEEEEECSSC-CSEEEEE
T ss_pred ccCCccccCC--ccccCCCCcEEEEEecCCC-CcEEEEE
Confidence 1115554443 2467889999999999998 7899996
No 89
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.40 E-value=1.2e-13 Score=88.72 Aligned_cols=98 Identities=18% Similarity=0.332 Sum_probs=68.0
Q ss_pred cEEEEEccCCeeeec--cccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAY--VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~--~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~ 78 (116)
|.|+| +++|..+.. ....+....++.|.|.++..+ |+|.|+|.+.|..|.... ..+.+.. .+
T Consensus 36 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~v~v~~--------~~ 100 (315)
T 1itb_B 36 GTITW-YKDDSKTPVSTEQASRIHQHKEKLWFVPAKVE------DSGHYYCVVRNSSYCLRIKISAKFVE--------NE 100 (315)
T ss_dssp SCCCE-ECTTSCSCSCCCTTSSSEECSSBEECTTCCGG------GCSCCEECCCSSSCCCCEECCCEEEC--------CC
T ss_pred ceEEE-EeCCCcCccccccCCcEeccCCeEEECCCChh------hCEEEEEEEeCCceEEEEEEEEEEeC--------CC
Confidence 67899 788764422 223455566779999999766 999999999999876553 2222221 11
Q ss_pred CCceEecC--CCeEEEeCCCcEEEEeee------cCcCCceeEEe
Q psy11568 79 GPLFRIEP--PYRFEFSNESGGRLDCAA------QGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~~~~--~~~~~~~~g~~~~l~C~~------~g~P~p~i~W~ 115 (116)
|.+...+ .....+..|+++.|.|.+ .|.|.|.++|+
T Consensus 101 -p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~ 144 (315)
T 1itb_B 101 -PNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWY 144 (315)
T ss_dssp -TTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEE
T ss_pred -CCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEE
Confidence 4332222 134567889999999998 89999999997
No 90
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.40 E-value=2.4e-12 Score=81.80 Aligned_cols=87 Identities=15% Similarity=0.246 Sum_probs=62.7
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCce
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLF 82 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~ 82 (116)
.|+| +++|..+. .....++.|.|.++..+ |+|.|+|.+.| |......|.|..+ |..
T Consensus 39 ~i~W-~~~~~~~~-----~~~~~~~~L~i~~~~~~------d~G~Y~C~~~n--g~~~~~~l~V~~~----------~~~ 94 (290)
T 2o26_X 39 FVRW-TFKTYFNE-----MVENKKNEWIQEKAEAT------RTGTYTCSNSN--GLTSSIYVFVRDP----------AKL 94 (290)
T ss_dssp EEEE-EEECSSSC-----EEEECSSEEEETTCCGG------GCEEEEEEESS--SCEEEEEEEEECS----------SCC
T ss_pred cEEE-ecCCccee-----eecCCCceEEEeccCHH------hCeEEEEEeeC--CccEEEEEEEeCC----------Ccc
Confidence 5789 77777651 11223468999999766 99999999999 5533455555543 332
Q ss_pred EecCCCeEEEeCCCcEEEEeeecCcCC-ceeEEe
Q psy11568 83 RIEPPYRFEFSNESGGRLDCAAQGSPT-PKIEWL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~~g~P~-p~i~W~ 115 (116)
...+ ....+.+|+.+.|.|.+.+ |. |.++|+
T Consensus 95 ~~~~-~~~~~~~g~~v~l~C~~~~-p~~~~v~W~ 126 (290)
T 2o26_X 95 FLVG-LPLFGKEDSDALVRCPLTD-PQVSQYSLI 126 (290)
T ss_dssp BCCC-CCEEEETTSCEEECCCBSC-CSCEEEEEE
T ss_pred cccc-cceEEecCCeEEEeCcCCC-CCCceEEEE
Confidence 2333 5677889999999999996 87 999994
No 91
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.40 E-value=9.3e-13 Score=84.94 Aligned_cols=72 Identities=18% Similarity=0.259 Sum_probs=54.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+ |.+...+.....+..|+++.|.|.+.|
T Consensus 195 ~L~i~~~~~~------d~G~Y~C~a~n~~~~~~~~~~l~V~~~----------P~~~~~~~~~~~~~~g~~~~l~C~~~g 258 (331)
T 3u83_A 195 RYRLVPSREA------HQQSLACIVNYHMDRFKESLTLNVQYE----------PEVTIEGFDGNWYLQRMDVKLTCKADA 258 (331)
T ss_dssp EEEECCCGGG------TTCEEEEEEEETTEEEEEEEECCEEEE----------EEEEEECCCSCCBTTCCCEEEEEEEEE
T ss_pred EEEEEecccc------CCCEEEEEEecCCCcceeeEEEEEecC----------CeEEEecCCCceEeCCCeEEEEEeCcC
Confidence 5777777655 999999999999876553 44545443 555444434555778999999999999
Q ss_pred cCCce-eEEe
Q psy11568 107 SPTPK-IEWL 115 (116)
Q Consensus 107 ~P~p~-i~W~ 115 (116)
.|.|. ++|+
T Consensus 259 ~p~p~~i~W~ 268 (331)
T 3u83_A 259 NPPATEYHWT 268 (331)
T ss_dssp ESCCCEEEEE
T ss_pred CCCCCEEEEE
Confidence 99998 9997
No 92
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.40 E-value=1.5e-12 Score=72.22 Aligned_cols=61 Identities=26% Similarity=0.387 Sum_probs=45.6
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|+| ++||+++....+.+....++ .|.|.++..+ |+|.|+|.|.|..|...+ ..|.|..
T Consensus 42 ~p~v~W-~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 42 PPVVVW-EKGGQQLAASERLSFPADGAEHGLLLTAALPT------DAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp CCEEEE-EETTEECCCCSSEECCEETTEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEE-EECcccccceeeEEEeecCceEEEEEecCChh------hCEEEEEEEEECCCEEEEEEEEEEEc
Confidence 478999 99999987544333333333 6999999766 999999999999998774 5555543
No 93
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.40 E-value=2e-12 Score=77.62 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=61.3
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc-eEE--EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV-ILS--RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-~~~--~~~~v~~~~~~~~~~~~ 78 (116)
|.+.| +++|.. ....++.|.|.++..+ |+|.|+|.+.|..|. ..+ ..|.|... ..
T Consensus 36 ~~~~W-~k~g~~--------~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~-------~~ 93 (184)
T 2gi7_A 36 DLYRL-EKLSSS--------RYQDQAVLFIPAMKRS------LAGRYRCSYQNGSLWSLPSDQLELVATGV-------FA 93 (184)
T ss_dssp SEEEE-EETTTC--------CEESSSEEEESSCCGG------GCEEEEEEEEETTEEBCCCCCEEEEEESS-------SC
T ss_pred CEEEE-EECCcc--------ccCcccEEEECcCChh------hCceEEEEEEcCCCccCCCCCEEEEecCc-------CC
Confidence 67899 777754 1234568999999766 999999999998763 222 44444321 11
Q ss_pred CCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 79 GPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 79 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.|.+...+ ...+.+|+++.|.|.+.+.| +.+.|+
T Consensus 94 ~p~i~~~p--~~~v~~G~~v~l~C~~~~~~-~~~~w~ 127 (184)
T 2gi7_A 94 KPSLSAQP--GPAVSSGGDVTLQCQTRYGF-DQFALY 127 (184)
T ss_dssp CCEEEEEC--CCSSCCTTCEEEEEECSSCC-CEEEEE
T ss_pred CCEEEeCC--CceecCCCcEEEEEEcCCCC-cEEEEE
Confidence 25555554 23456899999999987655 688996
No 94
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.40 E-value=2.7e-12 Score=77.61 Aligned_cols=95 Identities=19% Similarity=0.371 Sum_probs=61.3
Q ss_pred cEEEEEccCCeeeecc--------c--cceEEe---eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE------EE
Q psy11568 2 YVLLWLIRDNTVIAYV--------K--DLRIAL---SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL------SR 62 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~--------~--~~~~~~---~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~------~~ 62 (116)
|.+.| .+++..+... . ..|..+ .+..|.|.++..+ |+|.|.|.+.|..|... ..
T Consensus 28 ~~~~W-~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~~~g~~~~~~~~~~~ 100 (201)
T 1dr9_A 28 TRIYW-QKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPS------DEGTYECVVLKYEKDAFKREHLAEV 100 (201)
T ss_dssp CEEEE-EETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGG------GCEEEEEEEEECCTTSCEEEEEEEE
T ss_pred cEEEE-EeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccch------hCeEEEEEEEcCCCCccccccccEE
Confidence 57899 8888876310 0 112222 2358999999766 99999999999876542 23
Q ss_pred EEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec-CcCCceeEEe
Q psy11568 63 FVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ-GSPTPKIEWL 115 (116)
Q Consensus 63 ~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~p~i~W~ 115 (116)
.|.|... ...|.+... ....|+.+.|.|.+. |.|.|.++|+
T Consensus 101 ~l~V~~~-------~~~p~~~~~-----~~~~g~~~~l~C~~~~g~P~p~i~W~ 142 (201)
T 1dr9_A 101 TLSVKAD-------FPTPSISDF-----EIPTSNIRRIICSTSGGFPEPHLSWL 142 (201)
T ss_dssp EEEEECC-------CCCCEEEEE-----ECSSTTEEEEEEEEEEESSCEEEEEE
T ss_pred EEEEcCC-------CCCCceEec-----cCCCCCeEEEEEecCCccCCCEEEEE
Confidence 3333332 001333221 113488999999995 9999999997
No 95
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.39 E-value=3.6e-12 Score=91.00 Aligned_cols=97 Identities=20% Similarity=0.291 Sum_probs=69.5
Q ss_pred CcEEEEEccCCeee--ec--cccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeee
Q psy11568 1 MYVLLWLIRDNTVI--AY--VKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLL 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~--~~--~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~ 75 (116)
.|.+.| ++++... .. ....+....++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+
T Consensus 277 ~p~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~~------ 343 (816)
T 3dmk_A 277 VPVFRW-YKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVE------DSGKYLCVVNNSVGGESVETVLTVTAP------ 343 (816)
T ss_dssp CCEEEE-EEECTTSSCEEECCCSSSEEEETTEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEECEE------
T ss_pred CCeEEE-EeCCCCCccCcceecCCceEeccceEEECCCCHh------HCEEEEEEEEcCCCceEEEEEEEEcCC------
Confidence 378999 5533211 11 112234455679999999766 999999999999886653 44555443
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+.+...+ ....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 344 ----~~~~~~~-~~~~v~~G~~v~l~C~~~g~p~~~v~W~ 378 (816)
T 3dmk_A 344 ----LSAKIDP-PTQTVDFGRPAVFTCQYTGNPIKTVSWM 378 (816)
T ss_dssp ----EEEEEES-SEEECCTTSCEEEEEEEEEECCCEEEEE
T ss_pred ----CceeeCC-CceEecCCCCEEEEEEEeccCCCEEEEE
Confidence 4444454 6677889999999999999999999997
No 96
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.39 E-value=1.5e-11 Score=74.48 Aligned_cols=74 Identities=23% Similarity=0.366 Sum_probs=52.9
Q ss_pred eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 25 SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 25 ~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
.++.|.|.++..+ |+|.|+|.+.+..+.... ..|.|..+ ...|.+...+ .. +..|+++.|.|
T Consensus 69 ~~~~L~i~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-------~~~p~i~~~~-~~--~~~g~~v~l~C 132 (208)
T 3r4d_A 69 SNGSLLFQMITMK------DMGVYTLDMTDENYRRTQATVRFHVHQP-------VTQPFLQVTN-TT--VKELDSVTLTC 132 (208)
T ss_dssp TTSCEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEEEECC-------CCCCEEEESC-SS--CCTTCCEEEEE
T ss_pred cCCeEEEcccccc------CCeEEEEEEEcccCceeEEEEEEEeccC-------CCCCEEecCC-ce--EeeCCCEEEEE
Confidence 3468999999766 999999999998643333 34444432 1124554444 33 78899999999
Q ss_pred eecCcCCceeEEe
Q psy11568 103 AAQGSPTPKIEWL 115 (116)
Q Consensus 103 ~~~g~P~p~i~W~ 115 (116)
.+.+.| |.++|+
T Consensus 133 ~~~~~p-p~i~W~ 144 (208)
T 3r4d_A 133 LSNDIG-ANIQWL 144 (208)
T ss_dssp ECSCTT-CEEEEE
T ss_pred ECCCCC-CceEEE
Confidence 999976 899997
No 97
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.38 E-value=2.5e-12 Score=87.77 Aligned_cols=97 Identities=13% Similarity=0.201 Sum_probs=62.4
Q ss_pred c-EEEEEccCCeeeeccccceEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEee
Q psy11568 2 Y-VLLWLIRDNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVS 73 (116)
Q Consensus 2 p-~v~W~~~~g~~~~~~~~~~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~ 73 (116)
| .|+| +++|..+......+....++ .|.|.++..+ | |.|+|.|.|..|.... ..+.+...
T Consensus 250 p~~v~W-~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d-G~Y~C~a~n~~g~~~~~~~l~v~~~---- 317 (523)
T 2rcj_C 250 PVTVSW-NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSNTKVDKRVEPLSL---- 317 (523)
T ss_pred CeEEEE-ecCCcccceEeCCcEecCCCcEEEEEEEEechhhcC------C-ceEEEEEEeCCCCcceEEecCCCcC----
Confidence 5 7999 88887754211111222222 6899998655 9 9999999999987543 33322221
Q ss_pred eeccCCCceEecCCCeEE-EeCCCcEEEEeeecCcCC----ceeEEeC
Q psy11568 74 LLDIQGPLFRIEPPYRFE-FSNESGGRLDCAAQGSPT----PKIEWLI 116 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~g~P~----p~i~W~~ 116 (116)
|.+...++.... +.+|+.+.|.|.+.|.|+ +.++|+.
T Consensus 318 ------P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k 359 (523)
T 2rcj_C 318 ------PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYV 359 (523)
T ss_pred ------ceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEE
Confidence 443333323333 678999999999999653 5899973
No 98
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.37 E-value=6.5e-12 Score=78.43 Aligned_cols=91 Identities=16% Similarity=0.237 Sum_probs=62.7
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGP 80 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p 80 (116)
|.++| +++|..+.. ...++.|.|.++..+ |+|.|+|.+.|..+.... ..|.|... .+.|
T Consensus 113 ~~v~W-~~~g~~~~~------~~~~~~l~i~~~~~~------d~G~Y~C~~~n~~~~~~~~~~l~V~~~-------~~~p 172 (262)
T 3rjd_A 113 YNVLY-YRNGKAFKF------FHWNSNLTILKTNIS------HNGTYHCSGMGKHRYTSAGISVTVKEL-------FPAP 172 (262)
T ss_dssp EEEEE-EETTEEEEE------EEECCCEEESSCCGG------GCEEEEEEEESSSEEEEECEEEEEECS-------SCCC
T ss_pred ceEEE-EECCccccc------cCCCCeEEEEECChh------hCEEEEEEEeCCCCccccceEEEeccC-------CCCC
Confidence 68999 889887752 223568999999766 999999999999865543 45555532 0124
Q ss_pred ceEecCCCeEEEeCCCcEEEEeeecCcCC-ceeEE
Q psy11568 81 LFRIEPPYRFEFSNESGGRLDCAAQGSPT-PKIEW 114 (116)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-p~i~W 114 (116)
.+...+ ...+..|+.+.|.|.+.+.|. |.+.|
T Consensus 173 ~~~~~~--~~~~~~g~~~~l~C~~~~~p~~p~~~~ 205 (262)
T 3rjd_A 173 VLNASV--TSPLLEGNLVTLSCETKLLLQRPGLQL 205 (262)
T ss_dssp EEEESS--CSSEETTCCEEEEEECCCCCC-----E
T ss_pred eEeecC--ceeecCCCeEEEEeEcccCCCCCCccE
Confidence 554443 345678999999999999986 65443
No 99
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.37 E-value=3.1e-12 Score=87.37 Aligned_cols=99 Identities=12% Similarity=0.220 Sum_probs=69.2
Q ss_pred cEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCce-EEEEEEEcCCCceEE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHST-VYRCRASNEAGVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G-~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
|.|+|+++||..+.. +.++. ..++.|.|.++..+ |+| .|+|.+.|..+...+ ..|.|... ...
T Consensus 144 ~~v~W~~~~g~~l~~--~~~~~~~~~~~L~i~~~~~~------d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~-----~~~ 210 (524)
T 2ec8_A 144 TNYSLKGCQGKPLPK--DLRFIPDPKAGIMIKSVKRA------YHRLCLHCSVDQEGKSVLSEKFILKVRPA-----FKA 210 (524)
T ss_dssp SCEEEECSSSCCCCS--SCEEEEETTTEEEEESCCGG------GTTCEEEEEEC----CCCCCCEECCEECC-----CCS
T ss_pred ceEEEEccCCcCcCC--CCceeECCCccEEEeccchh------hCCceEEEEEEECCceEEEEEEEEEEEeC-----CCC
Confidence 789995558888763 22333 34668999999766 999 999999998766543 44444310 011
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCce-eEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPK-IEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~-i~W~ 115 (116)
.|.+...+ ....+.+|+++.|.|.+.|.|.|. ++|+
T Consensus 211 -~p~i~~~~-~~~~v~~G~~v~L~C~~~g~p~p~~i~W~ 247 (524)
T 2ec8_A 211 -VPVVSVSK-ASYLLREGEEFTVTCTIKDVSSSVYSTWK 247 (524)
T ss_dssp -CCEEECSC-SEEEEETTSCEEEEEEEEESSTTCEEEEE
T ss_pred -CCcEEecC-CcceEEcCCcEEEEEEEecCCCcEEEEEE
Confidence 26666665 677899999999999999999987 9997
No 100
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.37 E-value=3.1e-12 Score=77.97 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=52.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc--eEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV--ILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~--~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.|..+. ... ..+.|... .. .|.+...+ ....+..|+.+.|.|.
T Consensus 72 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~------~~-~p~v~~~~-~~~~~~~g~~v~l~C~ 137 (213)
T 3nl4_L 72 TLTISDLECA------DAATYYCQSTYENPTYVSFGGGTEVGVKGD------PV-APTVLIFP-PSADLVATGTVTIVCV 137 (213)
T ss_dssp EEEECSCCGG------GCEEEEEEECCSSTTTCEECCCEEEEEECC------CB-CCEEEEEC-CCHHHHTTSEEEEEEE
T ss_pred EEEECCCChH------HCEEEEEecCCCCceeEEeCCCeEEEEeCC------Cc-CCeEEEeC-CchhhccCCcEeEEEE
Confidence 6999999766 999999999998764 222 33444321 11 25555544 2334456999999999
Q ss_pred ecC-cCCceeEEe
Q psy11568 104 AQG-SPTPKIEWL 115 (116)
Q Consensus 104 ~~g-~P~p~i~W~ 115 (116)
+.| .|.|.++|+
T Consensus 138 ~~g~~P~~~v~W~ 150 (213)
T 3nl4_L 138 ANKYFPDVTVTWE 150 (213)
T ss_dssp EEEEBSCCEEEEE
T ss_pred EecccCCcEEEEE
Confidence 999 899999997
No 101
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.37 E-value=1e-11 Score=74.01 Aligned_cols=90 Identities=19% Similarity=0.318 Sum_probs=60.0
Q ss_pred cEEEEEccCCeeeeccc----------cceEEe--eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeC
Q psy11568 2 YVLLWLIRDNTVIAYVK----------DLRIAL--SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAG 69 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~----------~~~~~~--~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~ 69 (116)
|.|.| ++++..+.... ..|..+ .+++|.|.+++.+ |+|.|.|.+.|..| .....|.|..+
T Consensus 24 ~~i~W-~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~------DsG~Y~C~~~n~~~-~~~~~L~V~~~ 95 (171)
T 1ccz_A 24 KEVLW-KKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSS------DEDEYEMESPNITD-TMKFFLYVLEM 95 (171)
T ss_dssp SCEEE-EETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGG------GCEEEEEECTTCCS-CEEEEEEEECC
T ss_pred ceEEE-EeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChh------hCceEEEEEeCCCC-cEEEEEEEECc
Confidence 67999 66665443211 113333 4578999999766 99999999999887 33455655543
Q ss_pred cEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 70 SVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 70 ~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...|.+.... ....|.|.+.+.|.|.++|+
T Consensus 96 -------~~~p~i~~~~---------~~~~L~C~~~~~p~p~i~W~ 125 (171)
T 1ccz_A 96 -------VSKPMIYWEC---------SNATLTCEVLEGTDVELKLY 125 (171)
T ss_dssp -------CCCCEEEEET---------TTTEEEEECSSCSSCEEEEE
T ss_pred -------CCCCEEEEec---------CCcEEEEEeCCCCCcEEEEE
Confidence 0114443322 11379999999999999997
No 102
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.37 E-value=3.3e-12 Score=78.03 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=57.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe------CcEe--
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA------GSVV-- 72 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~------~~~~-- 72 (116)
.|.|+| ++||..+... ...++.|.|.++..+ |+|.|+|.+.+..+.. ..|.+.. ....
T Consensus 29 ~~~i~W-~k~g~~l~~~-----~~~~~~L~i~~v~~~------DsG~Y~C~~~~~~s~~--~~v~v~~~~~~~~~~~~~~ 94 (204)
T 1sy6_A 29 AKNITW-FKDGKMIGFL-----TEDKKKWNLGSNAKD------PRGMYQCKGSQNKSKP--LQVYYRMGSADDAKKDAAK 94 (204)
T ss_dssp SSEEEE-EETTEEEEEE-----ESSCCCEEEEEGGGC------CEEEEEEESSSSCCCC--EEEEEEC------------
T ss_pred CCEEEE-EECCEECCCC-----CCCCCeEEeCCCCcC------CCEEEEEEecCCCCee--EEEEEEEeccccccccccc
Confidence 378999 8999887531 123568999999766 9999999986643322 2333320 0000
Q ss_pred ------e-------eeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 73 ------S-------LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 73 ------~-------~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
. ......+.+...+ . ....+|+++.|.|. |.|.|.++|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~-~v~~~G~~v~L~C~--g~p~p~i~W~ 146 (204)
T 1sy6_A 95 KDDAKKDDAKKDGSDGNEEMGGITQTP-Y-KVSISGTTVILTCP--QYPGSEILWQ 146 (204)
T ss_dssp ------------------------CCC-C-EEEEETTEEEEECS--CCCSSCEEEE
T ss_pred cccccccccccccccccccccceecCC-c-eeeecCCcEEEEcC--CCCCCceEEE
Confidence 0 0000002222222 2 23337999999999 8899999997
No 103
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.37 E-value=6.8e-12 Score=74.58 Aligned_cols=84 Identities=21% Similarity=0.361 Sum_probs=59.9
Q ss_pred EEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceE
Q psy11568 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFR 83 (116)
Q Consensus 4 v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~ 83 (116)
+.| +++|..+.. .++.|.|.++..+ |+|.|+|.+.|..+.. ...+.|..+ +...
T Consensus 40 ~~W-~~~~~~~~~--------~~~~L~i~~~~~~------d~G~Y~C~~~n~~~s~-~~~l~V~~~----------~~~~ 93 (175)
T 1fnl_A 40 TQW-FHNESLISS--------QASSYFIDAATVN------DSGEYRCQTNLSTLSD-PVQLEVHIG----------WLLL 93 (175)
T ss_dssp CEE-EETTEEEES--------SCSEEEESSCCGG------GCEEEEEECSSSCCCC-CEEEEEECS----------SEEE
T ss_pred eEE-EECCEEccC--------CceEEEEeCCCcc------cCEEEEEEeeCCcccc-cEEEEEeCC----------Ccee
Confidence 679 888877652 3558999999766 9999999999865432 233444432 3333
Q ss_pred ecCCCeEEEeCCCcEEEEeeecCcCC-ceeEEe
Q psy11568 84 IEPPYRFEFSNESGGRLDCAAQGSPT-PKIEWL 115 (116)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~C~~~g~P~-p~i~W~ 115 (116)
..+ ...+.+|+.+.|.|.+.+.|+ +.+.|+
T Consensus 94 ~~~--~~~~~~g~~~~l~C~~~~~~~~~~~~W~ 124 (175)
T 1fnl_A 94 QAP--RWVFKEEDPIHLRCHSWKNTALHKVTYL 124 (175)
T ss_dssp ECS--CSEEETTCCEEEEEEECTTCCCEEEEEE
T ss_pred eCC--CceecCCCCEEEEEEcCCCCCceEEEEE
Confidence 333 345778999999999998865 499997
No 104
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.36 E-value=1.4e-11 Score=76.20 Aligned_cols=80 Identities=15% Similarity=0.223 Sum_probs=51.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE------EEEEEEEeCcEeeeec---cCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL------SRFVHVKAGSVVSLLD---IQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~------~~~~~v~~~~~~~~~~---~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.|..|... ...|.|..... .... ...+.+...+ ....+.+|+++
T Consensus 74 ~L~I~~v~~~------DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~-~~~p~~~~~~~~v~~~p-~~~~v~~G~~v 145 (238)
T 2p1y_A 74 SLILELATPS------QTSVYFCASGDLGQTNERLFFGHGTKLSVLGSAD-DAKKDAAKKDGQVRQSP-QSLTVWEGETA 145 (238)
T ss_dssp EEEESSCCGG------GCEEEEEEEEC------CEEECCCEEEEEECCCH-HHHHHHHHHHTCCEEEC-SEEEEETTSCE
T ss_pred EEEEecCCcc------cCeeEEEEEEeCCCccccceeCCCeEEEEeccCC-CCcCCcccceeeEEccC-ceEEEeCCCeE
Confidence 7999999766 99999999999865211 12344433200 0000 0001444444 67788999999
Q ss_pred EEEeeecCcCCceeEEe
Q psy11568 99 RLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 99 ~l~C~~~g~P~p~i~W~ 115 (116)
.|.|.+.+.|.|.+.|+
T Consensus 146 ~L~C~~~~~p~~~i~W~ 162 (238)
T 2p1y_A 146 ILNCSYENSAFDYFPWY 162 (238)
T ss_dssp EEEEECCCTTCCEEEEE
T ss_pred EEEEEEecCCCCcEEEE
Confidence 99999999999999997
No 105
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.36 E-value=4e-12 Score=69.59 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=44.7
Q ss_pred CcEEEEEccCCeeeeccccceEE--eeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIA--LSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~--~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.|+| ++||+++......++. ..++ .|.|.++..+ |+|.|+|.|.|..|...+ ..|.|.
T Consensus 34 ~p~v~W-~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 34 TPEVTW-SCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQ------DGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp CCEEEE-EETTEECCTTGGGTEEEEECSSEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEE-EECceEeeeeccceeeeecccceEEEEEcCCCcc------CCEEEEEEEEECCCEEEEEEEEEEE
Confidence 478999 9999998754433332 2232 6999999766 999999999999998764 555554
No 106
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.36 E-value=4.3e-12 Score=76.37 Aligned_cols=97 Identities=12% Similarity=0.063 Sum_probs=62.9
Q ss_pred cEEEEEccCCeeeeccccc-eEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-E--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-S--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~--~~~~v~~~~~~~~~~~ 77 (116)
+.+.| +++|..+...... .....++.|.|.++.++ |+|.|+|.+.|..+... + ..|.|... .
T Consensus 32 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~-------~ 97 (188)
T 1oll_A 32 VEYQL-HFEGSLFAVDRPKPPERINKVKFYIPDMNSR------MAGQYSCIYRVGELWSEPSNLLDLVVTEM-------Y 97 (188)
T ss_dssp CEEEE-EETTEEEEEECCSSCTTCCEEEEEESSCCGG------GCEEEEEEEEETTEECCCCCCEEEEEESC-------S
T ss_pred CEEEE-EECCCcccccccccCCCcceeEEEeCcCCcc------cCeEEEEEecCCCCCCCCCCceEEEeccc-------C
Confidence 56889 8888876521110 11123347999999766 99999999998754321 2 44444421 1
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
..|.+...+ ...+.+|+++.|.|.+.+ +.+.+.|+
T Consensus 98 ~~p~i~~~p--~~~v~~G~~v~L~C~~~~-~~~~~~w~ 132 (188)
T 1oll_A 98 DTPTLSVHP--GPEVISGEKVTFYCRLDT-ATSMFLLL 132 (188)
T ss_dssp CCCEEEEES--CSEEETTCEEEEEEECSS-SCSEEEEE
T ss_pred CCCeEEECC--CCccccCCEEEEEEEcCC-CCCEEEEE
Confidence 125665544 235788999999999876 45789996
No 107
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.36 E-value=3.7e-12 Score=78.30 Aligned_cols=76 Identities=21% Similarity=0.338 Sum_probs=55.1
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCC-CceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcE-EEEe
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEA-GVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGG-RLDC 102 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~l~C 102 (116)
++.|.|.++..+ |+|.|+|.+.+.. +.... ..|.|.... . .|.+...+ ....+..|+.+ .|.|
T Consensus 76 ~~~L~i~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p------~-~~~~~~~~-~~~~~~~g~~~~~l~C 141 (231)
T 2pet_A 76 QGRLVLAEAQVG------DERDYVCVVRAGAAGTAEATARLNVFAKP------E-ATEVSPNK-GTLSVMEDSAQEIATC 141 (231)
T ss_dssp TCCEEESSCCGG------GCEEEEEEEECGGGCEEEEEEEEEEEBCC------C-CCEEEECC-SSCCTTCCSEEEEEEE
T ss_pred CceEEEcccCcc------cCceEEEEEEecCCCceEEEEEEEEEecC------C-CcEEecCC-cceeecCCCceEEEEE
Confidence 457999999766 9999999999987 54442 455555420 1 14444443 55556678888 9999
Q ss_pred ee-cCcCCceeEEe
Q psy11568 103 AA-QGSPTPKIEWL 115 (116)
Q Consensus 103 ~~-~g~P~p~i~W~ 115 (116)
.+ .|.|.|.++|+
T Consensus 142 ~~~~~~p~p~i~W~ 155 (231)
T 2pet_A 142 NSRNGNPAPKITWY 155 (231)
T ss_dssp EEEEEBSCCEEEEE
T ss_pred EeECcccCCEEEEE
Confidence 99 89999999997
No 108
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.35 E-value=3.4e-14 Score=91.01 Aligned_cols=96 Identities=15% Similarity=0.206 Sum_probs=59.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGP 80 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p 80 (116)
|.++| +++|..+......+.......|.|.++..+ |+|.|+|.+.|..|.... ..|.+... |
T Consensus 37 ~~v~W-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~n~~g~~~~~~~l~v~~~----------~ 99 (317)
T 2y25_A 37 THIVW-YKDEREISVDEKHDFKDGICTLLITEFSKK------DAGIYEVILKDDRGKDKSRLKLVDEAF----------K 99 (317)
T ss_dssp CEEEE-EETTEEECCSCC-----CCEEEEETTCCST------TCSCEEEEEESSSCEEEEEECCSTHHH----------H
T ss_pred CEEEE-EECCeEcCCCCcEEEECCeEEEEEccCCcc------cCeEEEEEEECCCCcEEEEEEEEEecC----------c
Confidence 78999 899998874333222223348999999766 999999999999886543 21111110 2
Q ss_pred ceEecCCCeEEEeCCCcEEEEeeecC----------cCCceeEEe
Q psy11568 81 LFRIEPPYRFEFSNESGGRLDCAAQG----------SPTPKIEWL 115 (116)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~C~~~g----------~P~p~i~W~ 115 (116)
.+...+ ....+..|+.+.|.|.+.+ .|.|.++|+
T Consensus 100 ~~~~~~-~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~ 143 (317)
T 2y25_A 100 ELMMEV-CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWS 143 (317)
T ss_dssp HHHHHH-HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEE
T ss_pred cccccC-CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEE
Confidence 221111 2223345666666666666 799999997
No 109
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.34 E-value=2.1e-11 Score=76.31 Aligned_cols=80 Identities=18% Similarity=0.228 Sum_probs=55.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcE------eeeeccCCCceEecCCCeEEEeCCCcEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSV------VSLLDIQGPLFRIEPPYRFEFSNESGGR 99 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~------~~~~~~~~p~~~~~~~~~~~~~~g~~~~ 99 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|..... .... ...+.+...+ ....+.+|+++.
T Consensus 81 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~-~~~~~v~~~p-~~~~v~~G~~v~ 152 (253)
T 3uzq_A 81 YLHLSSLTSG------DTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGG-GSELVMTQTP-ASLAVSLGQRAT 152 (253)
T ss_dssp EEEECSCCGG------GCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC----------CCEEEEC-SEEEECTTSCEE
T ss_pred EEEeCCCCcc------cCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCC-cccceEECcC-CeEEEeCCCCEE
Confidence 3999999766 999999999997655432 3444442000 0000 0114555555 778899999999
Q ss_pred EEeeecCcCCc----eeEEe
Q psy11568 100 LDCAAQGSPTP----KIEWL 115 (116)
Q Consensus 100 l~C~~~g~P~p----~i~W~ 115 (116)
|.|.+.+.|.| .+.|+
T Consensus 153 L~C~~~~~~~~~~~~~v~W~ 172 (253)
T 3uzq_A 153 ISCRASENVDRYGNSFMHWY 172 (253)
T ss_dssp EEEEESSCCEETTEECEEEE
T ss_pred EEEEecCccccCCCcEEEEE
Confidence 99999999887 99997
No 110
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.34 E-value=1.6e-11 Score=78.40 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=66.9
Q ss_pred CcEEEEEccCCeeeeccccceEEee--CC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEee---
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALS--NG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVS--- 73 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~--~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~--- 73 (116)
.|.++| +++|.++........... .+ .|.|.++..+ |+|.|+|.+.+..+... ..+.+.......
T Consensus 137 ~~~v~W-~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~-~~~~~~~~~~~~~~~ 208 (312)
T 2y23_A 137 NAKVNY-IFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDE------DEGTYTFQLQDGKATNH-STVVLVGDVFKKLQK 208 (312)
T ss_dssp SCEEEE-EETTEEECSSSSCEEEEETTTTEEEEEESCCCGG------GCEEEEEEEESSSCEEE-EEEEECTHHHHHHHH
T ss_pred CCEEEE-EECCEECeeCCcEEEEEccCCCEEEEEEccCCcc------cCEeEEEEEEeCCceEE-EEEEEcchhhhhhcc
Confidence 378999 999998875433333322 22 3999999766 99999999987653332 222221000000
Q ss_pred ---------eeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc-eeEEe
Q psy11568 74 ---------LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP-KIEWL 115 (116)
Q Consensus 74 ---------~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p-~i~W~ 115 (116)
....+ |.+.... ...+..|+.+.|.|.+.|.|.| .++|+
T Consensus 209 ~~~~~~~~~~~~~~-p~~~~~~--~~~v~~G~~~~l~C~~~~~p~~~~v~W~ 257 (312)
T 2y23_A 209 EAEFQRQEWIRKQG-PHFVEYL--SWEVTGECNVLLKCKVANIKKETHIVWY 257 (312)
T ss_dssp HHHHHHHHHHHHHS-SEEEEEE--EEEEETTTEEEEEEEEESCCSSCEEEEE
T ss_pred cccccccchhhccC-Cceeecc--eEEEeCCCEEEEEEEEcCCCCCCEEEEe
Confidence 00111 5554332 3678899999999999999988 99997
No 111
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.34 E-value=1.2e-11 Score=73.89 Aligned_cols=65 Identities=11% Similarity=0.110 Sum_probs=48.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS 107 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~ 107 (116)
.|.|.++..+ |+|.|+|.+.|..+ ...+.|... .. + ....+.+|+++.|.|.+.+.
T Consensus 69 ~L~i~~v~~~------D~G~Y~C~~~~~~~---~~~l~V~~~-------------~~-~-~~~~v~~g~~~~l~C~~~~~ 124 (184)
T 2ny1_B 69 PLIIKNLKIE------DSDTYICEVEDQKE---EVQLLVFGL-------------TA-N-SDTHLLQGQSLTLTLESPPG 124 (184)
T ss_dssp CEEECSCCGG------GCEEEEEEETTEEE---EEEEEEEEE-------------EE-S-SCSEEETTCCEEEEEECCTT
T ss_pred EEEEecCCHH------HCEEEEEEEEcCCC---cEEEEEEEe-------------cC-C-CCceeecCCCEEEEEEcCCC
Confidence 5999999766 99999999998754 222322211 01 1 23366789999999999999
Q ss_pred CCceeEEeC
Q psy11568 108 PTPKIEWLI 116 (116)
Q Consensus 108 P~p~i~W~~ 116 (116)
|.|.++|+.
T Consensus 125 p~~~v~W~~ 133 (184)
T 2ny1_B 125 SSPSVQCRS 133 (184)
T ss_dssp CCCEEEEEC
T ss_pred CCCEEEEEe
Confidence 999999973
No 112
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.33 E-value=3.7e-12 Score=72.52 Aligned_cols=59 Identities=15% Similarity=0.179 Sum_probs=43.3
Q ss_pred CcEEEEEccCCeeeeccccceEEe---------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIAL---------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~---------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|+| ++||+++.......... ..+.|.|.++... |+|.|+|.|.|..|...+ ..|.+
T Consensus 29 ~P~I~W-~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~YtC~A~N~~G~~~~t~~l~v 97 (126)
T 1he7_A 29 APSLRW-LFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHV------NNGNYTLLAANPFGQASASIMAAF 97 (126)
T ss_dssp CCEEEE-EETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGG------GCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCeEEE-EECCEECCCCCceeEEEeeccccccccceEEEECcCCCC------CCEEEEEEEEECCCeEEEEEEEEE
Confidence 489999 99999997543322221 1247999999665 999999999999998764 43433
No 113
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.33 E-value=7e-12 Score=76.11 Aligned_cols=97 Identities=12% Similarity=0.130 Sum_probs=62.8
Q ss_pred cEEEEEccCCeeeeccccc-eEE--eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC----ceEE--EEEEEEeCcEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIA--LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG----VILS--RFVHVKAGSVV 72 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~--~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g----~~~~--~~~~v~~~~~~ 72 (116)
|.+.| +|+|..+...... +.. ..++.|.|.++..+ |+|.|+|.+.|... ...+ ..|.|...
T Consensus 36 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~------D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~--- 105 (201)
T 1nkr_A 36 EHFLL-HREGMFNDTLRLIGEHHDGVSKANFSISRMTQD------LAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGL--- 105 (201)
T ss_dssp SEEEE-EEESSSCEEEEEECEEETTEEEEEEEESSCCGG------GCEEEEEEEEBTTBTTCCCCCCCCEEEEEECS---
T ss_pred CEEEE-EECCCcCCcceeeeecCCCCceEEEEeccCCcc------cCeEEEEeEecCCCCccccCCCCCEEEEeecc---
Confidence 67999 8888765421110 011 12457999999766 99999999987531 1222 34555432
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...|.+...+ . ..+.+|+++.|.|.+.+ |.+.+.|+
T Consensus 106 ----~~~p~i~~~p-~-~~v~~G~~v~L~C~~~~-~~~~~~w~ 141 (201)
T 1nkr_A 106 ----YEKPSLSAQP-G-PTVLAGENVTLSCSSRS-SYDMYHLS 141 (201)
T ss_dssp ----SCCCEEEEES-C-SEECTTCEEEEEEEESS-CCSEEEEE
T ss_pred ----CCCCceecCC-C-CccCCCCeEEEEEeCCC-CCceEEEE
Confidence 0126666555 3 36789999999999986 66889996
No 114
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.33 E-value=1.5e-11 Score=77.37 Aligned_cols=71 Identities=18% Similarity=0.313 Sum_probs=53.9
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc----eEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV----ILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~----~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.|..|. ... ..|.|... |.+...+ ....+.+|+++.|.
T Consensus 80 ~L~I~~v~~~------DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~----------~~v~~~p-~~~~v~~G~~v~L~ 142 (256)
T 1nqb_A 80 YMQLSSLTSE------DSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD----------IELTQTP-LSLPVSLGDQASIS 142 (256)
T ss_dssp EEEECSCCGG------GCEEEEEEECCTTSSSSCSEECCCEEEEECCC----------CCEEEEC-SEEEECTTCCEEEE
T ss_pred EEEECcCChh------hCEEEEEEEeeccCccceeEEcCceeeeeccc----------ccEEecC-cEEEEecCCcEEEE
Confidence 7999999766 999999999998663 111 23333322 5555555 67788999999999
Q ss_pred eeecCcCCc-----eeEEe
Q psy11568 102 CAAQGSPTP-----KIEWL 115 (116)
Q Consensus 102 C~~~g~P~p-----~i~W~ 115 (116)
|.+.+.|.| .++|+
T Consensus 143 C~~~~~~~~~~~~~~v~W~ 161 (256)
T 1nqb_A 143 CRSSQSIVHSNGNTYLEWY 161 (256)
T ss_dssp EEESSCCBCTTSCBCEEEE
T ss_pred eEecCcccccccceEEEEE
Confidence 999999875 99997
No 115
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.33 E-value=3.3e-11 Score=75.02 Aligned_cols=80 Identities=18% Similarity=0.275 Sum_probs=53.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-E--EEEEEEeCcE------eeeeccCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-S--RFVHVKAGSV------VSLLDIQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~--~~~~v~~~~~------~~~~~~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
+|.|.++..+ |+|.|.|.+.|..+... . ..|.|..... +.... ..+.+...+ ....+.+|+++
T Consensus 82 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~v~~G~~v 153 (247)
T 2ghw_B 82 YLQMNSLRAE------DTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGG-SETTLTQSP-ATLSLSPGERA 153 (247)
T ss_dssp EEEECSCCGG------GCEEEEEEEEETTEEEEECCCEEEEECSCC-------------CCCCEEEEC-SEEEECTTSCE
T ss_pred EEEECcCCHH------HCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCC-cceEEEccC-CEEEecCCCcE
Confidence 6999999766 99999999999843221 1 2344432100 00000 113344444 67788999999
Q ss_pred EEEeeecCcCCceeEEe
Q psy11568 99 RLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 99 ~l~C~~~g~P~p~i~W~ 115 (116)
.|.|.+.+.|.|.++|+
T Consensus 154 ~L~C~~~~~~~~~v~W~ 170 (247)
T 2ghw_B 154 TLSCRASQSVRSNLAWY 170 (247)
T ss_dssp EEEEEESSCCTTCEEEE
T ss_pred EEEEEeCCCccceEEEE
Confidence 99999999999999997
No 116
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.33 E-value=2.8e-12 Score=85.56 Aligned_cols=96 Identities=13% Similarity=0.107 Sum_probs=63.9
Q ss_pred EEEEEccCCeeeeccccc--eEE-------eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEee
Q psy11568 3 VLLWLIRDNTVIAYVKDL--RIA-------LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVS 73 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~--~~~-------~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~ 73 (116)
.|+| ++||.++...... ... ...+.|.|.++..+ |+|.|+|.|.|..+... ..+.+...
T Consensus 149 ~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~-~~~~~~~~---- 216 (438)
T 1qgc_4 149 NVKW-KIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTSTSP-IVKSFNRN---- 216 (438)
T ss_dssp EEEE-EETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEEETTCSSC-EEEEEETT----
T ss_pred EEEE-EECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccC------CCCeEEEEEEecccCCc-eecccccc----
Confidence 7999 8899987642000 000 11236889988665 99999999999987642 12222211
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeeecCcC--CceeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSP--TPKIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P--~p~i~W~ 115 (116)
. .+..+..+ ....+.+|+.+.|.|.+.|.| .+.++|+
T Consensus 217 ---~-~~~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~ 255 (438)
T 1qgc_4 217 ---E-CEVMLVES-GGGLVKPGGSLKLSCTASGFIFNRCAMSWV 255 (438)
T ss_dssp ---C--CCEEEEE-CCEEECTTCCEEEEEEEESSCGGGSCEEEE
T ss_pred ---c-ceeEEecC-CceEEecCCcEEEEEEEcccccCCcEEEEE
Confidence 0 12333333 566788999999999999998 6799996
No 117
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.33 E-value=1.4e-11 Score=76.90 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=62.1
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCce
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLF 82 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~ 82 (116)
.++| +++|..+.. .+..|.|.++..+ |+|.|+|.+.|..+... ..+.|..+ + +
T Consensus 33 ~~~W-~~~g~~~~~--------~~~~l~i~~~~~~------d~G~Y~C~~~~~~~s~~-~~l~v~~~----------~-~ 85 (262)
T 3rjd_A 33 STQW-FLNGTATQT--------STPSYRITSASVN------DSGEYRCQRGLSGRSDP-IQLEIHRG----------W-L 85 (262)
T ss_dssp CEEE-EETTEECSC--------CSSEEEESSCCGG------GCEEEEEEESSSCCCCC-EEEEEECS----------S-E
T ss_pred eEEE-EECCEEeec--------cCCeEEEecCCcc------cCeEEEEEEecCCcccc-EEEEEecc----------c-e
Confidence 7999 889887752 2457899999766 99999999998765432 33333332 3 3
Q ss_pred EecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 83 RIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
...+ ....+.+|+.+.|.|.+ .+.|.+.++|+
T Consensus 86 ~~~~-~~~~~~~g~~v~l~C~~~~~~p~~~v~W~ 118 (262)
T 3rjd_A 86 LLQV-SSRVFTEGEPLALRCHAWKDKLVYNVLYY 118 (262)
T ss_dssp EEEE-SCSEEETTSCEEEEEEEGGGCCCEEEEEE
T ss_pred EecC-CCeEEecCCeEEEEEEccCCCCCceEEEE
Confidence 3333 34467789999999999 77889999997
No 118
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.32 E-value=7.3e-12 Score=74.44 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=60.7
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCce
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLF 82 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~ 82 (116)
.++| +++|..+.. .++.|.|.++..+ |+|.|+|.+.|..+... ..+.|..+ +..
T Consensus 36 ~i~W-~~~~~~~~~--------~~~~L~i~~v~~~------d~G~Y~C~~~~~~~s~~-~~l~V~~~----------~~~ 89 (176)
T 1f2q_A 36 STKW-FHNGSLSEE--------TNSSLNIVNAKFE------DSGEYKCQHQQVNESEP-VYLEVFSD----------WLL 89 (176)
T ss_dssp CCEE-EETTEECSC--------CSSEEEECSCCGG------GCEEEEEECTTSSCCCC-EEEEEECS----------SEE
T ss_pred eEEE-EECCeECCC--------CceEEEEecccee------cCEEEEEEcCCcccccc-EEEEEeCc----------cee
Confidence 4889 888877652 3568999999766 99999999998765332 33444422 333
Q ss_pred EecCCCeEEEeCCCcEEEEeee-cCcCCceeEEe
Q psy11568 83 RIEPPYRFEFSNESGGRLDCAA-QGSPTPKIEWL 115 (116)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~C~~-~g~P~p~i~W~ 115 (116)
...+ ...+.+|+.+.|.|.+ .+.|.|.++|+
T Consensus 90 ~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 121 (176)
T 1f2q_A 90 LQAS--AEVVMEGQPLFLRCHGWRNWDVYKVIYY 121 (176)
T ss_dssp EEES--CSEEETTSCEEEEEEEGGGCCEEEEEEE
T ss_pred ecCC--cceeeCCCCEEEEEEecCCCCceEEEEE
Confidence 3333 2466789999999999 46778899997
No 119
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.32 E-value=4.8e-12 Score=81.76 Aligned_cols=73 Identities=12% Similarity=0.217 Sum_probs=51.6
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE------EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL------SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~------~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
..|.|.++..+ |+|.|+|.+.|..+... ...|.|... +.+..+..+ ...+.+|+.+.|
T Consensus 74 ~~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~--------p~~p~i~~~--~~~~~~g~~~~l 137 (327)
T 2wng_A 74 FSISISNITPA------DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAK--------PSAPVVSGP--AARATPQHTVSF 137 (327)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEESSTTCEEEEECCCEEEEEEBC--------CCCCEEECC--SSCBCTTCEEEE
T ss_pred eEEEEccCccc------cCeEEEEEeecCCCcceeEeecCcEEEEEEec--------CCCceeecc--ccccCCCCEEEE
Confidence 47999999766 99999999999866421 134444432 112233333 245678999999
Q ss_pred EeeecCcCCc--eeEEe
Q psy11568 101 DCAAQGSPTP--KIEWL 115 (116)
Q Consensus 101 ~C~~~g~P~p--~i~W~ 115 (116)
.|.+.|.|+| .++|+
T Consensus 138 ~C~~~g~p~~~~~v~W~ 154 (327)
T 2wng_A 138 TCESHGFSPRDITLKWF 154 (327)
T ss_dssp EEEEEEEBSSCCEEEEE
T ss_pred EEEEeCccCCCcEEEEE
Confidence 9999999876 89997
No 120
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.32 E-value=1.8e-11 Score=76.90 Aligned_cols=69 Identities=17% Similarity=0.439 Sum_probs=51.3
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee-
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA- 104 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~- 104 (116)
..|.|.++..+ |+|.|+|.+.|..+... ...+.+... + ..+....+..|+++.|.|.+
T Consensus 84 ~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~l~V~----------~----~~p~~~~v~~G~~v~L~C~~~ 143 (268)
T 3mj6_A 84 GSLLLQDVQKA------DEGIYTCEIRLKNESMVMKKPVELWVL----------P----EEPRDLRVRVGDTTQMRCSIQ 143 (268)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEETTCCCEEEEEEEEEEE----------C----CCCSEEEEETTCCEEECCBCE
T ss_pred EEEEECCCCHh------HCEEEEEEEEecCCcceEEEEEEEEEe----------c----cCCCccccccCCcEEEEEEec
Confidence 57999999766 99999999999765443 233322221 1 11256778899999999999
Q ss_pred --cCcCCceeEEe
Q psy11568 105 --QGSPTPKIEWL 115 (116)
Q Consensus 105 --~g~P~p~i~W~ 115 (116)
.+.|.|.++|+
T Consensus 144 ~~~~~p~~~v~W~ 156 (268)
T 3mj6_A 144 STEEKRVTKVNWM 156 (268)
T ss_dssp ESSSSCCCEEEEE
T ss_pred CCCCCCccceEEE
Confidence 67799999997
No 121
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.31 E-value=1.3e-11 Score=80.82 Aligned_cols=84 Identities=15% Similarity=0.197 Sum_probs=59.7
Q ss_pred cEEEEEccCCeeeecc------ccceEEe------------e--CCeEEecCCCCCCCCCCCCceEEEEEEEcC--CCce
Q psy11568 2 YVLLWLIRDNTVIAYV------KDLRIAL------------S--NGSLMFPPFPETGFRPDVHSTVYRCRASNE--AGVI 59 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~------~~~~~~~------------~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~--~g~~ 59 (116)
|.|+| +++|..+... .+.++.. . ...|.|.++..+ |+|.|+|.|.|. .|..
T Consensus 211 p~i~W-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~g~~ 283 (363)
T 1wio_A 211 GELWW-QAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQ------YAGSGNLTLALEAKTGKL 283 (363)
T ss_dssp EEEEE-EESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGG------GCEEEEEEECBTTTTCCE
T ss_pred eeEEE-ecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcC------cCcEEEEEEEEhhhcCeE
Confidence 78999 8888876531 0112222 2 238999999766 999999999999 8865
Q ss_pred EE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCce--eEEeC
Q psy11568 60 LS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPK--IEWLI 116 (116)
Q Consensus 60 ~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~--i~W~~ 116 (116)
.. ..|.|.. ..|+.+.|.|.+.|.|.|. ++|+.
T Consensus 284 ~~~~~l~V~~------------------------v~g~~~~l~C~~~g~p~p~~~i~W~~ 319 (363)
T 1wio_A 284 HQEVNLVVMR------------------------ATQLQKNLTCEVWGPTSPKLMLSLKL 319 (363)
T ss_dssp EEEEEEEEEE------------------------ECCCSSSEEEEEESSCCTTCCEEEEC
T ss_pred EEEEeEEEEE------------------------ecCCCeeEEEEEccccCCCccEEEEe
Confidence 53 3222221 1188899999999999998 99974
No 122
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.31 E-value=1.3e-11 Score=72.73 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=59.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPL 81 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~ 81 (116)
+.+.| +++|..+.. ....+.+.++..+ |+|.|+|.+.|..... ...|.|..+ +.
T Consensus 35 ~~~~W-~~~g~~~~~--------~~~~~~~~~~~~~------d~G~Y~C~~~~~~~s~-~~~l~v~~~----------~~ 88 (170)
T 3ry4_A 35 DSIQW-FHNGNLIPT--------HTQPSYRFKANNN------DSGEYTCQTGQTSLSD-PVHLTVLFE----------WL 88 (170)
T ss_dssp SCEEE-EETTEECTT--------CCSSEEEEECCGG------GCEEEEEEETTSBCCC-CEEEEEECC----------SE
T ss_pred ceEEE-EECCeEccc--------CccceEEEecccc------cCeEEEEEEeCCCceE-eEEEEEECC----------ce
Confidence 57899 889887753 1335667788655 9999999999864332 234444432 33
Q ss_pred eEecCCCeEEEeCCCcEEEEeeec-CcCCceeEEe
Q psy11568 82 FRIEPPYRFEFSNESGGRLDCAAQ-GSPTPKIEWL 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~-g~P~p~i~W~ 115 (116)
....+ ...+.+|+.+.|.|.+. +.|.+.++|+
T Consensus 89 ~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~~W~ 121 (170)
T 3ry4_A 89 VLQTP--HLEFQEGETIMLRCHSWKDKPLVKVTFF 121 (170)
T ss_dssp EEECS--CSEECTTCCEEEEEEEGGGCCEEEEEEE
T ss_pred EecCC--CceeecCCeEEEEEECCCCCCCceEEEE
Confidence 33333 34567899999999994 5577999997
No 123
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.31 E-value=3.7e-12 Score=77.99 Aligned_cols=76 Identities=22% Similarity=0.309 Sum_probs=48.9
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee-
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA- 104 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~- 104 (116)
+..|.|.++..+ |+|.|+|.+.+.........|.|..+ ...|.+...+ ...+..|+++.|.|.+
T Consensus 71 ~~sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~l~V~~~-------~~~p~i~~~~--~~~v~~G~~~~l~C~~~ 135 (222)
T 4i0k_A 71 NASLRLQRVRVT------DEGSYTCFVSIQDFDSAAVSLQVAAP-------YSKPSMTLEP--NKDLRPGNMVTITCSSY 135 (222)
T ss_dssp BCCEEECSCCGG------GCSCEEEEEEECCCCCCCCCCCCCBC-------CCCCEEECCC-------CCSEEEEEEEEE
T ss_pred eEEEEECCcccc------cCEEEEEEEEeCCCceEEEEEEEEcC-------CCCCcEEeCC--CceecCCceEEEEEecc
Confidence 457999999766 99999999998632211222222221 0114444443 3456789999999999
Q ss_pred cCcCCceeEEeC
Q psy11568 105 QGSPTPKIEWLI 116 (116)
Q Consensus 105 ~g~P~p~i~W~~ 116 (116)
.|.|.|.++|+.
T Consensus 136 ~g~P~~~v~W~~ 147 (222)
T 4i0k_A 136 QGYPEAEVFWKD 147 (222)
T ss_dssp EEBSCCEEEEEC
T ss_pred cccCCCeEEEEc
Confidence 889999999973
No 124
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.31 E-value=7.7e-12 Score=81.90 Aligned_cols=86 Identities=7% Similarity=-0.080 Sum_probs=61.5
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
.|.++| +++|..+ ...++.|.|.++..+ |+|.|+|.+.|..+.... ..+.|...
T Consensus 125 ~~~v~W-~~~~~~~--------~~~~~~L~i~~v~~~------d~G~Y~C~a~~~~~~~~~~~~l~v~~~---------- 179 (363)
T 1wio_A 125 SPSVQC-RSPRGKN--------IQGGKTLSVSQLELQ------DSGTWTCTVLQNQKKVEFKIDIVVLAF---------- 179 (363)
T ss_dssp CCCEEE-ECSSSCE--------EEESSEEEECSBCGG------GCEECEEEEEETTEEEEECCEECEECC----------
T ss_pred CCeEEE-EcCCCcc--------cccceEEEEeeCChh------cCCEEEEEEecCCCeEEEEEEEEEecC----------
Confidence 378999 7776543 235668999999766 999999999997654432 23333321
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecC-----cCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQG-----SPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g-----~P~p~i~W~ 115 (116)
|.. +....+.+|+.+.|.|.+.+ .|.|.++|+
T Consensus 180 p~~----~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~ 216 (363)
T 1wio_A 180 QKA----SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQ 216 (363)
T ss_dssp SCS----EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEE
T ss_pred CCC----CCceEEecCCEEEEEEEEecccccCCCceeEEEe
Confidence 221 14566788999999998888 889999996
No 125
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.31 E-value=1.3e-11 Score=74.79 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=52.0
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA 104 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 104 (116)
.+|.|.++..+ |+|.|.|.+.+..+.... ..+.+..+ .+...... ....+..|..+.+.|.+
T Consensus 79 ~sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~c~~ 142 (218)
T 4frw_A 79 GSVLLRNAVQA------DEGEYECRVSTFPAGSFQARLRLRVLVP---------PLPSLNPG-PALEEGQGLTLAASCTA 142 (218)
T ss_dssp CCEEESSCCGG------GCEEEEEEEEEETTEEEEEEEEEEEEBC---------CCCEEEEC-SCEETTCCSEEEEEEEE
T ss_pred EEEEEeeccHH------HCCceeEEEEeccCceeeeEEEEEEeee---------ccceeeee-eeeeeeeccccceeeec
Confidence 36999999766 999999999887665443 22222222 12222332 45566778999999999
Q ss_pred cCcCCceeEEe
Q psy11568 105 QGSPTPKIEWL 115 (116)
Q Consensus 105 ~g~P~p~i~W~ 115 (116)
.|.|+|.++|+
T Consensus 143 ~g~p~p~i~W~ 153 (218)
T 4frw_A 143 EGSPAPSVTWD 153 (218)
T ss_dssp EEBSCCEEEEE
T ss_pred cCCcCceEEEE
Confidence 99999999997
No 126
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.6e-13 Score=89.72 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=61.6
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCce-EEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHST-VYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQG 79 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G-~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~ 79 (116)
|.|.| ++++..+...........++.|.|.++..+ |+| .|+|.|.|..|.... ..+.|..+
T Consensus 188 p~i~W-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~~Y~C~a~n~~g~~~~~~~l~V~~~---------- 250 (347)
T 2ifg_A 188 EQAGW-ILTELEQSATVMKSGGLPSLGLTLANVTSD------LNRKNVTCWAENDVGRAEVSVQVNVSFP---------- 250 (347)
T ss_dssp CCCCE-EESCCCSSEEECCCCCSSEEEEEEESCCST------TTTCCEEECCEETTEECCEEECCCCBEE----------
T ss_pred CEEEE-EcCCceeecccccceecccceEEEeeCChH------HCCCeEEEEEEcCCCCEEEEEEEEEcCC----------
Confidence 67899 666655432111111223447999999766 999 999999999876653 33333222
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+... ...+|+.+.|.|.+.|.|.|.++|+
T Consensus 251 P~i~~~-----~~~~g~~v~l~C~~~g~P~p~i~W~ 281 (347)
T 2ifg_A 251 ASVQLH-----TAVEMHHWCIPFSVDGQPAPSLRWL 281 (347)
T ss_dssp EEEEEC-----CCEESSSEEEEEEEEEESCCEEEEE
T ss_pred Ceeeec-----cCccCceEEEEEEeeecCCCcEEEE
Confidence 342111 1245899999999999999999996
No 127
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.31 E-value=1.8e-11 Score=74.57 Aligned_cols=75 Identities=17% Similarity=0.300 Sum_probs=51.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc--eEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV--ILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~--~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.|..+. ... ..|.|.... .. .|.+...+ ....+..|+.+.|.|.
T Consensus 71 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-----~~-~P~i~~~~-~~~~~~~g~~v~l~C~ 137 (213)
T 3mj8_L 71 TLTISKAQAG------DEADYYCQSWDGTNSAWVFGSGTKVTVLGQP-----NA-APSVTLFP-PSSEELKTNQATLVCM 137 (213)
T ss_dssp EEEESSCCGG------GCEEEEEEEEETTTTEEEEBCCEEEEEECSC-----CB-CCEEEEEC-CCHHHHTTTEEEEEEE
T ss_pred EEEECCCChh------hCEEEEEEeccCCcceeEEcCceEEEEeCCC-----CC-CCeEEccC-CCcccccCCcEEEEEE
Confidence 6999999766 999999999999873 222 445554210 01 26665554 2333447999999999
Q ss_pred ecCc-CC-ceeEEe
Q psy11568 104 AQGS-PT-PKIEWL 115 (116)
Q Consensus 104 ~~g~-P~-p~i~W~ 115 (116)
+.|. |+ +.++|+
T Consensus 138 ~~g~~p~~~~v~W~ 151 (213)
T 3mj8_L 138 INGFYPADVAVTWE 151 (213)
T ss_dssp EEEEBSSCCEEEEE
T ss_pred eeceeCCCeEEEEE
Confidence 9996 33 389997
No 128
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.31 E-value=3.1e-11 Score=74.79 Aligned_cols=77 Identities=18% Similarity=0.334 Sum_probs=53.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+... ...|.|.... .....+.+...+ ....+.+|+++.|.|.+.
T Consensus 76 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~----~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~ 144 (240)
T 1moe_A 76 TLIIDPVEAD------DVATYYCQQTNEDPYTFGGGTKLEIKGGG----SGGGGEVQLQQS-GAELVEPGASVKLSCTAS 144 (240)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCCBCCCEEEEECCCS----CCCCCCCEEEEC-CCEEECTTCCEEEEEEEE
T ss_pred EEEEcCCChh------hCEEEEEEEccCCceeecCCEEEEEecCC----CCCCceEEEeCC-CceEEeCCCcEEEEEEEc
Confidence 6999999766 99999999999866432 2344444320 000112334444 567788999999999999
Q ss_pred CcCC--ceeEEe
Q psy11568 106 GSPT--PKIEWL 115 (116)
Q Consensus 106 g~P~--p~i~W~ 115 (116)
|.|. +.+.|+
T Consensus 145 g~p~~~~~v~W~ 156 (240)
T 1moe_A 145 GFNIKDTYMHWV 156 (240)
T ss_dssp SSCGGGSCEEEE
T ss_pred CccCCCCEEEEE
Confidence 9874 589997
No 129
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.31 E-value=3.4e-12 Score=78.31 Aligned_cols=72 Identities=19% Similarity=0.229 Sum_probs=49.8
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCC-CceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcE-EEEe
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEA-GVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGG-RLDC 102 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~l~C 102 (116)
+..|.|.++..+ |+|.|+|.+.+.. +.... ..|.|..+ |.+...+.... ..|+.+ .|.|
T Consensus 77 ~~sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~L~V~~~----------P~~~~~~~~~~--~~g~~~~~l~C 138 (221)
T 3eow_R 77 DASLRMFGLRVE------DEGSYTCLFVTFPQGSRSVDIWLRVLAK----------PQNTAEVQKVQ--LTGEPVPMARC 138 (221)
T ss_dssp CCEEECCCSSCC------CCSCBEEEEEESSSCSCEEECCCCCCCC----------CEEEEEEECCC--CCSSSCCEEEE
T ss_pred CceEEEccCChH------HCeEEEEEEEeCCCCceEEEEEEEEEEC----------CCceeecCCcc--cCCceEEEEEE
Confidence 448999999766 9999999999976 54443 22322222 55544331221 568888 5999
Q ss_pred eec-CcCCceeEEe
Q psy11568 103 AAQ-GSPTPKIEWL 115 (116)
Q Consensus 103 ~~~-g~P~p~i~W~ 115 (116)
.+. |.|.|.++|+
T Consensus 139 ~~~~g~P~p~v~W~ 152 (221)
T 3eow_R 139 VSTGGRPPAQITWH 152 (221)
T ss_dssp EEESCSSCCCEEEE
T ss_pred ECCCccCCCeeEEE
Confidence 987 8999999996
No 130
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.31 E-value=6.1e-12 Score=76.58 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=51.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc-eEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV-ILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA 104 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 104 (116)
.|.|.++..+ |+|.|.|.+.|..+. ... ..|.|... ... .|.+...+ ....+..|+.+.|.|.+
T Consensus 69 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~v~~~~-~~~~~~~g~~v~l~C~~ 135 (211)
T 3tv3_L 69 SLTVSGLQTD------DEAVYYCGSLVGNWDVIFGGGTKLTVLGQ-----PKA-APSVTLFP-PSSEELQANKATLVCLI 135 (211)
T ss_dssp EEEEESCCGG------GCEEEEEEEEETTTEEEECCCEEEEECCS-----CCB-CCEEEEEC-CCHHHHHTTCEEEEEEE
T ss_pred EEEECCCChh------HCEEEEEEEecCCCceeECCCceEEEeCC-----CCc-CCeeEecC-CchhhhcCCCeEEEEEe
Confidence 6999999766 999999999998872 222 34444421 001 26665554 22333469999999999
Q ss_pred cCc--CCceeEEe
Q psy11568 105 QGS--PTPKIEWL 115 (116)
Q Consensus 105 ~g~--P~p~i~W~ 115 (116)
.|. |.+.++|+
T Consensus 136 ~g~~p~~~~v~W~ 148 (211)
T 3tv3_L 136 SDFYPGAVTVAWK 148 (211)
T ss_dssp EEEBSSCCEEEEE
T ss_pred eeecCCCeEEEEE
Confidence 986 35789996
No 131
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.30 E-value=4.7e-12 Score=80.26 Aligned_cols=99 Identities=10% Similarity=0.045 Sum_probs=66.3
Q ss_pred cEEEEEccCCeeeeccccceEE-eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQ 78 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~ 78 (116)
|.++|++.++..+... .+.. ..++.|.|.++..+ |+|.|+|.+.|..+...+ ..|.|... ...+
T Consensus 120 ~~v~W~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~s~~~~l~V~~~-----~~~~ 186 (292)
T 4dkd_C 120 AGVSLVRVRGRPLMRH--TNYSFSPWHGFTIHRAKFI------QSQDYQCSALMGGRKVMSISIRLKVQKV-----IPGP 186 (292)
T ss_dssp SSEEEEEGGGCCCCSS--CCEECCSSSCCEETTCCGG------GCSEEEEEECSTTSCEECCCEEEEEECC-----CCSS
T ss_pred eeEEEEecCCCccccC--CcccccCCceEEECCCCHH------HCeEEEEEEEeCCCceeEEEEEEEEeCC-----CCCC
Confidence 6799955556665432 2232 23456999999766 999999999998776653 44555431 0012
Q ss_pred CCceEecCCCeEEEeCCCcEEEEeeecCcCC-ceeEEe
Q psy11568 79 GPLFRIEPPYRFEFSNESGGRLDCAAQGSPT-PKIEWL 115 (116)
Q Consensus 79 ~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.+.|. +.+.|+
T Consensus 187 -p~i~~~~-~~~~~~~g~~v~l~C~~~~~~~~~~~~w~ 222 (292)
T 4dkd_C 187 -PALTLVP-AELVRIRGEAAQIVCSASSVDVNFDVFLQ 222 (292)
T ss_dssp -CEEEEES-SCBCCCSSSCEEEEEEEEESSSCCEEECC
T ss_pred -CeEEccC-CceeEecCCCEEEEEEecCCCCceEEEEe
Confidence 6666665 4555678999999999998775 356664
No 132
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.30 E-value=4.2e-11 Score=75.08 Aligned_cols=80 Identities=18% Similarity=0.211 Sum_probs=54.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC----ceE-EEEEEEEeCcE------ee-eeccCCCceEecCCCeEEEeCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG----VIL-SRFVHVKAGSV------VS-LLDIQGPLFRIEPPYRFEFSNE 95 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g----~~~-~~~~~v~~~~~------~~-~~~~~~p~~~~~~~~~~~~~~g 95 (116)
.|.|.++..+ |+|.|.|.+.|..+ ... ...|.|..... +. ....+ |.+...+ ....+.+|
T Consensus 82 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~-~~~~~~p-~~~~v~~G 153 (256)
T 3umt_A 82 YLELRSLTSE------DSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTD-IQLTQSP-SSLSASLG 153 (256)
T ss_dssp EEEECSCCGG------GCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CC-CCEEEEC-SEEEECTT
T ss_pred EEEECCCCcc------cCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccc-cEEEcCC-CeEEEECC
Confidence 4999999766 99999999998721 111 13344432100 00 00011 5555555 77889999
Q ss_pred CcEEEEeeecCcCCceeEEe
Q psy11568 96 SGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 96 ~~~~l~C~~~g~P~p~i~W~ 115 (116)
+++.|.|.+.+.|.|.+.|+
T Consensus 154 ~~v~L~C~~~~~~~~~v~W~ 173 (256)
T 3umt_A 154 ERVSITCRASQDIGSNLNWL 173 (256)
T ss_dssp CCEEEEEEESSCCTTCEEEE
T ss_pred CCEEEEEEEecCCCcEEEEE
Confidence 99999999999999999996
No 133
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.29 E-value=2.5e-11 Score=83.88 Aligned_cols=97 Identities=21% Similarity=0.280 Sum_probs=62.0
Q ss_pred cEEEEEccCCeeeecc-----------ccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYV-----------KDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~-----------~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
|.|+| ++++..+... .+......+++|.|.+++.+ |+|.|+|.+.|..|.... ..|.|..
T Consensus 397 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 469 (581)
T 3o3u_N 397 QRLEW-KLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQ------DEGIFRCQAMNRNGKETKSNYRVRVYQ 469 (581)
T ss_dssp CEEEE-EEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGG------GCEEEEEEEECTTSCEEEEEEEEEEEB
T ss_pred ceEEE-EEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccc------cCeEEEEEEEcCCCceeEEEEEEEEEc
Confidence 68999 6665432110 11223445668999999766 999999999999887732 4555544
Q ss_pred CcEeeeeccCCCceEecCCCeEEEeCCCcE-EEEeeecC-cCCceeEEe
Q psy11568 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESGG-RLDCAAQG-SPTPKIEWL 115 (116)
Q Consensus 69 ~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~l~C~~~g-~P~p~i~W~ 115 (116)
+. . .|.+.... . . +..+... .|.|.+.+ .|.|.++|+
T Consensus 470 ~~------~-~p~i~~~~-~-~-~~~~~~~~~l~C~~~~~~P~~~i~W~ 508 (581)
T 3o3u_N 470 IP------G-KPEIVDSA-S-E-LTAGVPNKVGTCVSEGSYPAGTLSWH 508 (581)
T ss_dssp CC------C-CCEEESCC-S-E-ECTTSCEEEEEEEEEEEBSCCEEEEE
T ss_pred CC------C-CCEEEcCC-c-c-cccCCceeEEEEECCCCCCCCeEEEE
Confidence 20 1 13332222 2 2 4455554 66999998 599999997
No 134
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.29 E-value=2.1e-11 Score=75.09 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=58.7
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCc
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPL 81 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~ 81 (116)
.|.| ++.+..+. .......+..|.|.++..+ |+|.|.|.+.|..+... ...|.|..+ |.
T Consensus 39 ~i~W-~~~~~~l~---~~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~n~~~~~~~~~~ltV~~~----------P~ 98 (210)
T 1gsm_A 39 SVQW-RGLDTSLG---AVQSDTGRSVLTVRNASLS------AAGTRVCVGSCGGRTFQHTVQLLVYAF----------PN 98 (210)
T ss_dssp EEEE-ESSTTTTC---CEEEESSEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEBC----------CS
T ss_pred ceEE-eecccccC---cEEecCCccEEEECccCcc------cCceEEEEEEeCCCceEEEEEEEEEec----------CC
Confidence 8999 55433221 1111222347999999766 99999999999887654 255555553 54
Q ss_pred eEecCCCeEEEeCCCcEEEEeeecCc-CC----ceeEEe
Q psy11568 82 FRIEPPYRFEFSNESGGRLDCAAQGS-PT----PKIEWL 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~g~-P~----p~i~W~ 115 (116)
.....+. ....|+.+ |.|.+.|. |. +.++|+
T Consensus 99 ~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wl 134 (210)
T 1gsm_A 99 QLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLL 134 (210)
T ss_dssp EEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEE
T ss_pred CcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEE
Confidence 4332212 45568888 99999986 64 478996
No 135
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.29 E-value=7.8e-12 Score=78.56 Aligned_cols=80 Identities=15% Similarity=0.196 Sum_probs=52.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-------ceE---EEEEEEEeCcE------eeeeccCCCceEecCCCeEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-------VIL---SRFVHVKAGSV------VSLLDIQGPLFRIEPPYRFE 91 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-------~~~---~~~~~v~~~~~------~~~~~~~~p~~~~~~~~~~~ 91 (116)
.|.|.++..+ |+|.|.|.+.|..| ... ...|.|..... +.... ..+.+...+ ....
T Consensus 79 ~L~I~~v~~~------DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~-~~~~~~~~p-~~~~ 150 (257)
T 1f3r_B 79 FLKMNSLQTD------DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGG-SDIKLTQSP-SLLS 150 (257)
T ss_dssp EEEEESCCTT------CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCC-CEECSCEET-SEEC
T ss_pred EEEECCCCcc------cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCc-cceEEEccC-CEEE
Confidence 7999999766 99999999999864 111 12344433100 00000 001222333 5677
Q ss_pred EeCCCcEEEEeeecCcCCceeEEe
Q psy11568 92 FSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 92 ~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+.+|+++.|.|.+.+.|.|.+.|+
T Consensus 151 v~~G~~v~L~C~~~~~~~~~v~W~ 174 (257)
T 1f3r_B 151 ASVGDRVTLSCKGSQNINNYLAWY 174 (257)
T ss_dssp CCTTCCEEEEEECSSCCBTCEEEE
T ss_pred EcCCCCEEEEEEECCcCCCcEEEE
Confidence 889999999999999999999997
No 136
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.29 E-value=3.6e-11 Score=82.94 Aligned_cols=71 Identities=10% Similarity=0.158 Sum_probs=55.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|+|.+.|..+.... ..|.|..+ |.+...+ ....+.+|+.+.|.|.+.+
T Consensus 76 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~l~V~~~----------p~~~~~~-~~~~v~~G~~v~l~C~~~~ 138 (585)
T 2ocw_A 76 VVNIAQLSQD------DSGRYKCGLGINSRGLSFDVSLEVSQG----------PGLLNDT-KVYTVDLGRTVTINCPFKT 138 (585)
T ss_pred EEEECCCCcc------cCEEEEEEcccCCCCceEEEEEEEecC----------ccccCCC-ccEEEEcCCCEEEEEEecC
Confidence 5999999766 999999999998776543 44555443 6665554 7788899999999999997
Q ss_pred cC-CceeEEe
Q psy11568 107 SP-TPKIEWL 115 (116)
Q Consensus 107 ~P-~p~i~W~ 115 (116)
.| .+.+.|+
T Consensus 139 ~~~~~~v~W~ 148 (585)
T 2ocw_A 139 ENAQKRKSLY 148 (585)
T ss_pred CCCCccEEEE
Confidence 54 6779997
No 137
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.29 E-value=2.2e-12 Score=86.49 Aligned_cols=89 Identities=20% Similarity=0.369 Sum_probs=54.9
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC-ceE----EEEEEEEeCcEeeeec
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG-VIL----SRFVHVKAGSVVSLLD 76 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-~~~----~~~~~v~~~~~~~~~~ 76 (116)
|.|+| +|.++.. .+ ....|.|.++..+ |+|.|+|.|.|..+ ... ...|.|..+
T Consensus 311 p~i~W---~g~~~~~-~~-----~~~~L~i~~~~~~------d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~------- 368 (450)
T 1z7z_I 311 AKVTL---NGVPAQP-LG-----PRAQLLLKATPED------NGRSFSCSATLEVAGQLIHKNQTRELRVLYG------- 368 (450)
T ss_dssp -----------------C-----CCCCEEEECCGGG------TTCEEEEEEEEEETTEEEEEEEEEECEEEEE-------
T ss_pred CEeEE---CCEEcCC-CC-----ceEEEEEecCccc------CCceEEEEEEcCCCCcccccceeEEEEEecC-------
Confidence 67788 6666521 11 2347899999766 99999999997644 332 133444332
Q ss_pred cCCCceEecC-CCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFRIEP-PYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ +....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 369 ---P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 405 (450)
T 1z7z_I 369 ---PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCL 405 (450)
T ss_dssp ---EECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEE
T ss_pred ---CceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEE
Confidence 4443332 36778899999999999999999999997
No 138
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.29 E-value=8e-12 Score=79.11 Aligned_cols=93 Identities=11% Similarity=0.106 Sum_probs=60.7
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCc
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPL 81 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~ 81 (116)
.|+| ++++.... .......+..|.|.++..+ |+|.|+|.+.|..+... ...|.|..+ + ..
T Consensus 31 ~v~W-~~~~~~~~---~~~~~~~~~~L~i~~~~~~------d~G~Y~C~~~~~~~~~~~~~~l~V~~~--------~-~~ 91 (289)
T 3ejj_X 31 SVEW-DGPISPYW---TLDPESPGSTLTTRNATFK------NTGTYRCTELEDPMAGSTTIHLYVKDP--------A-HS 91 (289)
T ss_dssp CCEE-ECSCSSSS---EECCCSSCCEEEESSCCGG------GCEEEEEECCC-----CEEEEEEECCS--------S-CS
T ss_pred cEEE-ccCCCceE---EEeccCCccEEEEeeeccc------cCEEEEEEEeccCCcceeEEEEEEeCC--------C-cc
Confidence 3689 56553321 1111123458999999766 99999999999876544 345555543 1 22
Q ss_pred eEecCCCeEEEeCCCcEEEEeeecCcCCce-eEEe
Q psy11568 82 FRIEPPYRFEFSNESGGRLDCAAQGSPTPK-IEWL 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~-i~W~ 115 (116)
+...+ ....+.+|+.+.|.|.+.+.|.+. ++|+
T Consensus 92 ~~~~~-~~~~v~~g~~v~L~C~~~~~~~~~~v~W~ 125 (289)
T 3ejj_X 92 WNLLA-QEVTVVEGQEAVLPCLITDPALKDSVSLM 125 (289)
T ss_dssp EEESC-SEEEEETTSCEEECEEESCGGGGGSEEEE
T ss_pred eeccc-ceEEEecCCceEeEEEccCCCcceEEEEE
Confidence 44555 788889999999999999988775 9996
No 139
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.29 E-value=5.2e-11 Score=75.84 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=53.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc---eE---EEEEEEEeCcE------eeeeccCCCceEecCCCeEEEeCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV---IL---SRFVHVKAGSV------VSLLDIQGPLFRIEPPYRFEFSNE 95 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~---~~---~~~~~v~~~~~------~~~~~~~~p~~~~~~~~~~~~~~g 95 (116)
.|.|.++..+ |+|.|.|.+.|..|. .. ...|.|..... +... ...+.+...+ ....+.+|
T Consensus 106 sL~I~~v~~~------DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~-~~~~~~~~~p-~~~~v~~G 177 (282)
T 1qok_A 106 YLQLSSLTSE------DTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGG-GSENVLTQSP-AIMSASPG 177 (282)
T ss_dssp EEEECSCCGG------GCEEEEEEEECSSSSCCCEEECCCEEEEEEC----------------CCCEEEEC-SEEEECTT
T ss_pred EEEECcCChh------hCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCC-ccceEEecCC-CEEEEcCC
Confidence 7999999766 999999999998761 11 12455543200 0000 0113344444 67788999
Q ss_pred CcEEEEeeecCcCCceeEEe
Q psy11568 96 SGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 96 ~~~~l~C~~~g~P~p~i~W~ 115 (116)
+++.|.|.+.+.| |.+.|+
T Consensus 178 ~~v~L~C~~~~~~-~~v~W~ 196 (282)
T 1qok_A 178 EKVTITCSASSSV-SYMHWF 196 (282)
T ss_dssp CCEEEEEEESSCC-SCCEEE
T ss_pred CcEEEEEEecCCC-ceEEEE
Confidence 9999999999999 999997
No 140
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.28 E-value=7.1e-11 Score=72.67 Aligned_cols=70 Identities=21% Similarity=0.326 Sum_probs=50.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC-
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG- 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g- 106 (116)
.|.|.++..+ |+|.|+|.+.|..|.... .+.+... +..... .....+.+|..+.+.|.+.|
T Consensus 84 ~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~-~v~~~~~----------~~~~~~-~~~~~~~~g~~v~l~c~~~g~ 145 (226)
T 4f80_A 84 ALRIHNVTAS------DSGKYLCYFQDGDFYEKA-LVELKVA----------ALGSDL-HVDVKGYKDGGIHLECRSTGW 145 (226)
T ss_dssp EEEESSCCGG------GCEEEEEEEEETTEEEEE-EEEEEEE----------BCCCCC-EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEeeCchH------HCeeEEEEEECCCcEEEE-EEEEeec----------cceecc-cceeeeccCCceeeEEEeccC
Confidence 6999999766 999999999998876553 2222221 111111 13456677999999999988
Q ss_pred cCCceeEEe
Q psy11568 107 SPTPKIEWL 115 (116)
Q Consensus 107 ~P~p~i~W~ 115 (116)
.|.|.++|+
T Consensus 146 ~P~p~i~W~ 154 (226)
T 4f80_A 146 YPQPQIQWS 154 (226)
T ss_dssp BSCCEEEEE
T ss_pred CCCCEEEEE
Confidence 499999997
No 141
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.5e-11 Score=68.84 Aligned_cols=60 Identities=22% Similarity=0.336 Sum_probs=45.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
|.+.| +++|..+...........++.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..
T Consensus 38 p~i~W-~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (118)
T 2eo9_A 38 PTILW-RKDGVLVSTQDSRIKQLENGVLQIRYAKLG------DTGRYTCIASTPSGEATWSAYIEVQE 98 (118)
T ss_dssp CEEEE-EESSSBCCTTSTTEEEEETTEEEEESCCGG------GCCCEEEEEECSSCEEEEECCEEEEC
T ss_pred CEEEE-EECCEECcCCCCeEEEccCCEEEEccCCcC------CCEEEEEEEEcCCCcEEEEEEEEEEe
Confidence 78999 889888764223233456779999999766 999999999999988664 4455554
No 142
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.27 E-value=7.3e-11 Score=73.57 Aligned_cols=81 Identities=11% Similarity=0.164 Sum_probs=51.9
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCc--Eeeee-------ccCCCceEecCCCeEEEeCCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGS--VVSLL-------DIQGPLFRIEPPYRFEFSNES 96 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~--~~~~~-------~~~~p~~~~~~~~~~~~~~g~ 96 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|..+. .+... ....+.++..+ ....+.+|+
T Consensus 75 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~ 147 (250)
T 3esu_F 75 SLTISNLEQE------DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQS-GPELVKPGA 147 (250)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEEC-CCEEECTTC
T ss_pred EEEEccCChh------hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecC-CceEEcCCc
Confidence 6999999766 999999999998665432 334443210 00000 00012333444 567788999
Q ss_pred cEEEEeeecCcC--CceeEEe
Q psy11568 97 GGRLDCAAQGSP--TPKIEWL 115 (116)
Q Consensus 97 ~~~l~C~~~g~P--~p~i~W~ 115 (116)
++.|.|.+.+.| .|.+.|+
T Consensus 148 ~v~L~C~~~~~~~~~~~v~W~ 168 (250)
T 3esu_F 148 SVKISCKDSGYAFSSSWMNWV 168 (250)
T ss_dssp CEEEEEECCSTTGGGSEEEEE
T ss_pred eEEEEEEecCCcccCCEEEEE
Confidence 999999999877 8899997
No 143
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.27 E-value=1.4e-11 Score=75.39 Aligned_cols=76 Identities=17% Similarity=0.250 Sum_probs=51.3
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCce---E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI---L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~---~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
..|.|.++..+ |+|.|.|.+.|..+.. . ...|.|... ... .|.+...++ ...+..|+.+.|.
T Consensus 79 ~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~~-~~~~~~g~~v~L~ 145 (219)
T 1c1e_H 79 AYLQINNLKNE------DMATYFCARGTTIVRAMDYWGQGTSLTVSSA-----KTT-PPSVYPLAP-GSAAQTNSMVTLG 145 (219)
T ss_dssp EEEEECSCCGG------GCEEEEEEEEETTTTEEEEECCCEEEEECCC-----CCB-CCEEEEECC-CSSSCCSSEEEEE
T ss_pred EEEEECCCCcc------cCEEEEEEEeccCcccceeecCceEEEEecC-----CCC-CCeEEEecC-ccccccCCeEEEE
Confidence 37999999766 9999999999986421 1 133444321 001 144443331 1234679999999
Q ss_pred eeecC-cCCc-eeEEe
Q psy11568 102 CAAQG-SPTP-KIEWL 115 (116)
Q Consensus 102 C~~~g-~P~p-~i~W~ 115 (116)
|.+.| .|.| .++|+
T Consensus 146 C~~~g~~P~p~~v~W~ 161 (219)
T 1c1e_H 146 CLVKGYFPEPVTVTWN 161 (219)
T ss_dssp EEEEEEBSSCCEEEEG
T ss_pred EEcccccCCCeEEEEE
Confidence 99999 8999 99996
No 144
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.27 E-value=2.4e-11 Score=81.42 Aligned_cols=101 Identities=12% Similarity=0.200 Sum_probs=63.8
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeecc--CC
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDI--QG 79 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~--~~ 79 (116)
.|+| +++|.++....... ...++.|.|.++..+ |+|.|+|.|.|..|.... ..+.+.....+.+... ..
T Consensus 120 ~v~W-~k~g~~l~~~~~~~-~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~ 191 (450)
T 1z7z_I 120 TVVL-LRGEKELKREPAVG-EPAEVTTTVLVRRDH------HGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATP 191 (450)
T ss_dssp EEEE-EETTEEEEEEECCT-TTEEEEEEEECCSSC------SSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSC
T ss_pred EEEE-eeCCEEeecccccc-cccceEEEEEeeccc------cCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCC
Confidence 8999 99999886422100 112247999998665 999999999999775331 2222222222222211 01
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCc-C--CceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGS-P--TPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P--~p~i~W~ 115 (116)
|.+. .+ ..+.+|+.+.|.|.+.|. | .+.++|+
T Consensus 192 p~~~-~~---~~v~~G~~v~l~C~~~g~~P~~~~~~~W~ 226 (450)
T 1z7z_I 192 PQLV-SP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLA 226 (450)
T ss_dssp CEEE-CC---SEEETTSEEEEEEEEESCTTGGGCEEEEE
T ss_pred CEec-Cc---eeEEeCCcEEEEEEeeCCCCCCceEEEEe
Confidence 2221 11 567889999999999999 7 7899996
No 145
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.26 E-value=1.6e-11 Score=83.82 Aligned_cols=101 Identities=21% Similarity=0.262 Sum_probs=61.7
Q ss_pred cEEEEEccCCeeeeccccce-EEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLR-IALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~-~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~ 73 (116)
|.|+| ++||.++....... ....++ .|.|.++..+ |+|.|+|.|.|..+... ...+.+...
T Consensus 353 ~~v~W-~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~~~~~~~~~~~~~---- 421 (523)
T 2rcj_C 353 VKFNW-YVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWL------DGKEYKCKVSNKALPAPIEKTISKAKG---- 421 (523)
T ss_pred eEEEE-EECCeEccCCccCCceecCCCcEEEEEEEEECHHHhc------CCCeEEEEEeCCCCCCceeEEEEcccC----
Confidence 48999 99998886432111 111222 4777777555 99999999999876543 233332100
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc--eeEEeC
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP--KIEWLI 116 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~~ 116 (116)
... .|.+...++....+. +..+.|.|.+.|.|+| .++|+.
T Consensus 422 -~~~-~P~v~~~~~~~~~~~-~~~~~l~C~~~g~~p~~~~v~W~k 463 (523)
T 2rcj_C 422 -QPR-EPQVYTLPPSREEMT-KNQVSLTCLVKGFYPSDIAVEWES 463 (523)
T ss_pred -CCC-CCEEEEeCCChHHcc-CCceEEEEEEEeeECCCCEEEEEE
Confidence 011 255554442333333 4559999999998776 889973
No 146
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.26 E-value=6.7e-12 Score=78.96 Aligned_cols=91 Identities=22% Similarity=0.377 Sum_probs=62.0
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcC-CCceEE----EEEEEEeCcEeeee
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNE-AGVILS----RFVHVKAGSVVSLL 75 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~-~g~~~~----~~~~v~~~~~~~~~ 75 (116)
.|.|+| +|.++... + ..+.|.|..+..+ |+|.|+|.|.|. .|.... ..|.|..+
T Consensus 125 ~~~i~W---~g~~~~~~-~-----~~~~l~i~~~~~~------~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~------ 183 (265)
T 2oz4_A 125 RAKVTL---NGVPAQPL-G-----PRAQLLLKATPED------NGRSFSCSATLEVAGQLIHKNQTRELRVLYG------ 183 (265)
T ss_dssp TSEEEE---SSCSSSCC-S-----SEECCEEECCGGG------TTEEEEEEEEEECSSSEEEEEEEEEEEEEEE------
T ss_pred CCEEEE---CCEEccCC-C-----CcEEEEEcccccc------CCceEEEEEEcCCCCCcccccccEEEEEEeC------
Confidence 378899 77766321 1 1235777777555 899999999854 466542 33444432
Q ss_pred ccCCCceEec-CCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 76 DIQGPLFRIE-PPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 76 ~~~~p~~~~~-~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+... .+....+.+|+.+.|.|.+.|.|.|.++|+.
T Consensus 184 ----p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~ 221 (265)
T 2oz4_A 184 ----PRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK 221 (265)
T ss_dssp ----EECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEE
T ss_pred ----CccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEE
Confidence 333222 1357788899999999999999999999973
No 147
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.26 E-value=1.1e-10 Score=75.20 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=53.7
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEE-EEcCCCceEE-EEEEEEeCcEeeeeccCCCceEe-cCCCeEEEeCC---CcEE
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCR-ASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRI-EPPYRFEFSNE---SGGR 99 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~-a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~~g---~~~~ 99 (116)
++.|.|.++..+ |+|.|+|. +.+..|.... ..|.|... |.+.. ..+....+.+| +.+.
T Consensus 91 ~~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~----------p~~~~~~~~~~~~~~~g~~~~~~~ 154 (331)
T 3u83_A 91 DGTIRLSRLELE------DEGVYICEFATFPTGNRESQLNLTVMAK----------PTNWIEGTQAVLRAKKGQDDKVLV 154 (331)
T ss_dssp BCCEEECSCCGG------GCEEEEEEEEEETTEEEEEEEEEEEEBC----------CEEEEEECSSCEEECTTCCCCEEE
T ss_pred CceEEEcccCcc------cCcEEEEEEEecCCCccEEEEEEEEecC----------CcceeecCCCceeecCCCccceEE
Confidence 457999999766 99999998 6666665443 45555543 44422 22366777778 7799
Q ss_pred EEee-ecCcCCceeEEe
Q psy11568 100 LDCA-AQGSPTPKIEWL 115 (116)
Q Consensus 100 l~C~-~~g~P~p~i~W~ 115 (116)
|.|. +.+.|.|.++|+
T Consensus 155 l~C~~~~~~p~~~i~W~ 171 (331)
T 3u83_A 155 ATCTSANGKPPSVVSWE 171 (331)
T ss_dssp EEEEEEEEBSCCEEEEE
T ss_pred EEEEecCCcCCceEEEE
Confidence 9997 889999999996
No 148
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.26 E-value=2.9e-11 Score=73.63 Aligned_cols=74 Identities=22% Similarity=0.394 Sum_probs=51.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|+|.+.|..+.... ..+.|... .. .|.+...++.. ....|+.+.|.|.+.
T Consensus 72 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~-~p~v~~~~~~~-~~~~g~~~~l~C~~~ 137 (213)
T 3d9a_L 72 TLSINSVETE------DFGMYFCQQSNSWPYTFGGGTKLEIKRA------DA-APTVSIFPPSS-EQLTSGGASVVCFLN 137 (213)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEECCC------CB-CCEEEEECCCH-HHHHTTEEEEEEEEE
T ss_pred EEEECCCChh------hCEEEEEeeecCCcceeCCCEEEEEecC------CC-CceeEeECCCh-hhcCCCcEEEEEEEe
Confidence 7999999766 999999999998775442 34444331 01 25555544222 234688999999998
Q ss_pred C-cCCc-eeEEe
Q psy11568 106 G-SPTP-KIEWL 115 (116)
Q Consensus 106 g-~P~p-~i~W~ 115 (116)
| .|.| .++|+
T Consensus 138 g~~p~~~~v~W~ 149 (213)
T 3d9a_L 138 NFYPKDINVKWK 149 (213)
T ss_dssp EEBSSCCEEEEE
T ss_pred eecCCceEEEEE
Confidence 8 5665 89997
No 149
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.26 E-value=1.6e-11 Score=74.83 Aligned_cols=75 Identities=20% Similarity=0.252 Sum_probs=50.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS 107 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~ 107 (116)
.|.|.++..+ |+|.|.|.+.|.........|.|... ... .|.+...++. ..+..|+.+.|.|.+.|.
T Consensus 79 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~l~V~~~-----~~~-~P~v~~~~~~-~~~~~g~~v~L~C~~~g~ 145 (210)
T 3d9a_H 79 YLDLNSVTTE------DTATYYCANWDGDYWGQGTLVTVSAA-----KTT-PPSVYPLAPG-SAAQTNSMVTLGCLVKGY 145 (210)
T ss_dssp EEEECSCCGG------GCEEEEEEETTSSCBCCCEEEEECCC-----CCB-CCEEEEECCT-TSCCCSSEEEEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEecCcccccceEEEeccC-----CCC-CCEEEEecCC-cccccCCcEEEEEEEeeE
Confidence 7999999766 99999999998641112234444321 001 1555433312 234679999999999997
Q ss_pred -CCc-eeEEe
Q psy11568 108 -PTP-KIEWL 115 (116)
Q Consensus 108 -P~p-~i~W~ 115 (116)
|.| .++|+
T Consensus 146 ~P~p~~v~W~ 155 (210)
T 3d9a_H 146 FPEPVTVTWN 155 (210)
T ss_dssp BSSCCEEEEG
T ss_pred ecCCcEEEEe
Confidence 888 99996
No 150
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.25 E-value=2.1e-11 Score=74.27 Aligned_cols=75 Identities=15% Similarity=0.268 Sum_probs=49.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..+.|.... .. .|.+...++. ..+..|+.+.|.|.+.
T Consensus 74 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-----~~-~P~v~~~~~~-~~~~~g~~v~L~C~~~ 140 (212)
T 1q0x_L 74 ALTITGAQTE------DEAIYFCALWSNNKLVFGGGTKLTVLGQP-----KS-SPTVTLFPPS-SEELSTAKATLVCTIT 140 (212)
T ss_dssp EEEESSCCGG------GCEEEEEEEECSSCEEECCCEEEEECCSC-----CB-CCEEEEECCC-HHHHTTTEEEEEEEEE
T ss_pred EEEECCCCcc------CCEEEEEEEecCchhhcCCCeEEEEecCC-----CC-CCeeEEeCCC-HHHccCCcEEEEEEEE
Confidence 7999999766 999999999998764332 334442110 01 2555544322 2234688999999999
Q ss_pred CcCCc--eeEEe
Q psy11568 106 GSPTP--KIEWL 115 (116)
Q Consensus 106 g~P~p--~i~W~ 115 (116)
|.+++ .++|+
T Consensus 141 g~~p~~~~v~W~ 152 (212)
T 1q0x_L 141 DFYPGVVTVDWK 152 (212)
T ss_dssp EEBSSCCEEEEE
T ss_pred EEeCCCeEEEEE
Confidence 86543 89997
No 151
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.25 E-value=1.6e-10 Score=71.90 Aligned_cols=80 Identities=11% Similarity=0.102 Sum_probs=51.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEe----eeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVV----SLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~----~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|..+... .....+ +..+..+ ....+.+|+++.|.
T Consensus 77 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~-~~~~~~~-~~~~v~~G~~v~L~ 148 (247)
T 1svz_A 77 TLKISRVEAE------DLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGS-EVQLQQS-GPELKKPGETVKIS 148 (247)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEEC----------------CCEEEEC-CCEEECTTCCEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEccCCccEECCCEEEEEECCccccccccccccC-ceEEeCC-CceeecCCCcEEEE
Confidence 6999999766 999999999998654332 34444432000 000001 2333444 33458899999999
Q ss_pred eeecCcC--CceeEEe
Q psy11568 102 CAAQGSP--TPKIEWL 115 (116)
Q Consensus 102 C~~~g~P--~p~i~W~ 115 (116)
|.+.+.| .+.+.|+
T Consensus 149 C~~~~~~~~~~~v~W~ 164 (247)
T 1svz_A 149 CKATNYAFTDYSMHWV 164 (247)
T ss_dssp EEEESSCGGGSCEEEE
T ss_pred EEEcCcccCCcEEEEE
Confidence 9999885 5789997
No 152
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.25 E-value=4e-11 Score=72.96 Aligned_cols=74 Identities=22% Similarity=0.454 Sum_probs=50.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|... .. .|.+...++.. .+..|+.+.|.|.+.
T Consensus 71 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~-~P~v~~~~~~~-~~~~g~~v~l~C~~~ 136 (210)
T 1lk3_L 71 TLTIDPVEAD------DTAIYFCQQSWNGPLTFGAGTKLELKRA------DA-APTVSIFPPST-EQLATGGASVVCLMN 136 (210)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEECCC------CB-CCEEEEECCCH-HHHTTTEEEEEEEEE
T ss_pred EEEECCCCHH------HCeEEEEEEEcCCCceeCCCEEEEEcCC------Cc-CCeEEEECCch-hhccCCcEEEEEEEE
Confidence 7999999766 999999999998765442 34444331 01 15555544222 234799999999999
Q ss_pred Cc-CCc-eeEEe
Q psy11568 106 GS-PTP-KIEWL 115 (116)
Q Consensus 106 g~-P~p-~i~W~ 115 (116)
|. |.| .++|+
T Consensus 137 g~~p~~~~v~W~ 148 (210)
T 1lk3_L 137 NFYPRDISVKWK 148 (210)
T ss_dssp EEBSSCCEEEEE
T ss_pred eEeCCceEEEEE
Confidence 84 554 89997
No 153
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.25 E-value=1.1e-10 Score=73.47 Aligned_cols=88 Identities=13% Similarity=0.124 Sum_probs=61.1
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCC---CCCCCCCCCCce--EEEEEEEcCCCceEE-EEEEEEeCcEeeeec
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPF---PETGFRPDVHST--VYRCRASNEAGVILS-RFVHVKAGSVVSLLD 76 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v---~~~~~~~~~d~G--~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~ 76 (116)
.|+| +++|.++.. .....++.+.+..+ ..+ |+| .|+|.+.|..|.... ..|.|...
T Consensus 37 ~v~W-~k~~~~l~~----~~~~~~~~~~~~~~~~~~~~------d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~------- 98 (265)
T 2oz4_A 37 QVHL-ALGDQRLNP----TVTYGNDSFSAKASVSVTAE------DEGTQRLTCAVILGNQSQETLQTVTIYSF------- 98 (265)
T ss_dssp EEEE-EETTEECCC----EEEECSSEEEEEEEEEECGG------GCEEEEEEEEEEETTEEEEEEEEEEEECC-------
T ss_pred EEEE-EeCCEECCc----eEeeCCCeEEEEeecccccc------cCCcceEEEEEecCCCCcEEEEEEEEeCC-------
Confidence 8999 899988753 33444556666555 433 777 599999999887653 55555432
Q ss_pred cCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEE
Q psy11568 77 IQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114 (116)
Q Consensus 77 ~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W 114 (116)
+.|.+.. ....+.+|+.+.|.|.+. |.|.++|
T Consensus 99 -p~p~~~~---~~~~v~~G~~v~l~C~~~--p~~~i~W 130 (265)
T 2oz4_A 99 -PAPNVIL---TKPEVSEGTEVTVKCEAH--PRAKVTL 130 (265)
T ss_dssp -CCCEEEE---SCSEEETTCEEEEEEECC--TTSEEEE
T ss_pred -CCceeec---CCceecCCCcEEEEEEcc--CCCEEEE
Confidence 1144432 234577899999999998 9999999
No 154
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.24 E-value=1.4e-10 Score=72.60 Aligned_cols=81 Identities=16% Similarity=0.192 Sum_probs=52.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce---E--EEEEEEEeCcE---eeeec-cCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI---L--SRFVHVKAGSV---VSLLD-IQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~---~--~~~~~v~~~~~---~~~~~-~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.|..+.. . ...|.|..... ..... ...+.+...+ ....+.+|+++
T Consensus 87 ~L~I~~v~~~------DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~G~~v 159 (257)
T 3gkz_A 87 YLQLKSVSSE------DTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSP-AIMSASPGEKV 159 (257)
T ss_dssp EEEECSCCGG------GCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSC-SEEEECTTCCE
T ss_pred EEEECCCChh------hCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCC-ceEEEeCCCcE
Confidence 6999999766 9999999999972211 1 12344432100 00000 0113444444 77889999999
Q ss_pred EEEeeecCcCCc-eeEEe
Q psy11568 99 RLDCAAQGSPTP-KIEWL 115 (116)
Q Consensus 99 ~l~C~~~g~P~p-~i~W~ 115 (116)
.|.|.+.+.|.| .+.|+
T Consensus 160 ~L~C~~~~~~~~~~v~W~ 177 (257)
T 3gkz_A 160 TLTCSASSSVSSSHLYWY 177 (257)
T ss_dssp EEEEEESSCCCGGGEEEE
T ss_pred EEEEEEccCccceEEEEE
Confidence 999999999888 99996
No 155
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.24 E-value=2.5e-11 Score=73.86 Aligned_cols=74 Identities=16% Similarity=0.233 Sum_probs=51.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|... .. .|.+...+ ....+..|+.+.|.|.+.
T Consensus 72 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~-~p~v~~~~-~~~~~~~~~~v~l~C~~~ 137 (213)
T 3r06_A 72 SFTISSLESE------DIGSYYCQQYYNYPWTFGPGTKLEIKRA------DA-KPTVSIFP-PSSEQLGTGSATLVCFVN 137 (213)
T ss_dssp EEEESSCCGG------GCSEEEEEECSSSSCEECCCEEEEECCC------CB-CCEEEEEC-CCHHHHTTTEEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEecccCCceEEcCCceEEEecc------CC-CceeeeeC-CCceecCCCCcEEEEEEe
Confidence 7999999766 999999999998654442 33444221 11 26665554 333445688899999999
Q ss_pred CcCC--ceeEEe
Q psy11568 106 GSPT--PKIEWL 115 (116)
Q Consensus 106 g~P~--p~i~W~ 115 (116)
|.|+ +.++|+
T Consensus 138 g~~p~~~~v~W~ 149 (213)
T 3r06_A 138 NFYPKDINVKWK 149 (213)
T ss_dssp EEBSSCEEEEEE
T ss_pred eecCCceEEEEE
Confidence 8764 388997
No 156
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.24 E-value=8.1e-11 Score=75.72 Aligned_cols=97 Identities=12% Similarity=0.106 Sum_probs=63.7
Q ss_pred cEEEEEccCCeeeeccccceEE---eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce-----E-EEEEEEEeCcEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA---LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-----L-SRFVHVKAGSVV 72 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~---~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-----~-~~~~~v~~~~~~ 72 (116)
+.+.| +++|..+......... ...+.|.|.++..+ |+|.|+|.|.|..|.. . ...|.|...
T Consensus 147 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~--- 216 (316)
T 3vh8_G 147 EHFFL-HKEGISKDPSRLVGQIHDGVSKANFSIGPMMLA------LAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGP--- 216 (316)
T ss_dssp SEEEE-EETTCCSCCEEEECEEETTEEEEEEEECSCCGG------GCEEEEEEEECTTCTTBCCCCCCCEEEEEECS---
T ss_pred cEEEE-EECCCccccceeeeeecCCCceEEEEECCCChh------hCceEEEEEecCCCCccccCCCCCEEEEecCC---
Confidence 57889 8887766421111111 12347999999766 9999999999997742 1 234444421
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.. .|.+...+ .. .+.+|+++.|.|.+. .|.+.+.|+
T Consensus 217 ---~~-~p~i~~~~-~~-~v~~G~~v~L~C~~~-~~~~~~~W~ 252 (316)
T 3vh8_G 217 ---YE-KPSLSAQP-GP-KVQAGESVTLSCSSR-SSYDMYHLS 252 (316)
T ss_dssp ---SC-CCEEEEES-CS-CCCTTSCCEEEEEES-SCCSEEEEE
T ss_pred ---CC-CCeEEeCC-CC-eecCCCcEEEEEECC-CCCcEEEEE
Confidence 01 25555554 22 567899999999997 478899996
No 157
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.24 E-value=8.8e-11 Score=81.02 Aligned_cols=70 Identities=11% Similarity=0.218 Sum_probs=53.5
Q ss_pred EEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec--
Q psy11568 29 LMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ-- 105 (116)
Q Consensus 29 l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~-- 105 (116)
|.|.++..+ |+|.|+|.| |..|.... ..|.|... .|.+.. + ....+..|+++.|.|.+.
T Consensus 408 L~I~~v~~~------D~G~Y~C~a-n~~g~~~~~~~l~V~~~---------~p~~~~-~-~~~~v~~G~~v~L~C~~~~~ 469 (585)
T 2ocw_A 408 VILNQLTSR------DAGFYWCLT-NGDTLWRTTVEIKIIEG---------EPNLKV-P-GNVTAVLGETLKVPCHFPCK 469 (585)
T ss_pred EEECCCChh------hCEEEEEcc-cCCCccceeEEEEEecC---------cccccc-C-CceeEecCCcEEEEEEecCC
Confidence 999999766 999999999 88776653 55655542 144332 3 667888999999999997
Q ss_pred --CcCCceeEEeC
Q psy11568 106 --GSPTPKIEWLI 116 (116)
Q Consensus 106 --g~P~p~i~W~~ 116 (116)
|.|.|.++|+.
T Consensus 470 ~~~~p~~~v~W~k 482 (585)
T 2ocw_A 470 FSSYEKYWCKWNN 482 (585)
T ss_pred CCCCccEEEEEee
Confidence 77899999974
No 158
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.24 E-value=1.4e-10 Score=72.78 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=53.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--E--EEEEEEEeCcEeeee--------ccCCCceEecCCCeEEEeCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--L--SRFVHVKAGSVVSLL--------DIQGPLFRIEPPYRFEFSNE 95 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~--~~~~~v~~~~~~~~~--------~~~~p~~~~~~~~~~~~~~g 95 (116)
.|.|.++..+ |+|.|.|.+.|..+.. . ...|.|..... ... ....+.+...+ ....+.+|
T Consensus 80 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~v~~~p-~~~~v~~G 151 (259)
T 3omz_A 80 RMILRNLIEN------DSGVYYCATWDQNYYKKLFGSGTSLVVTDKQG-SADDAKKDAAKKDGAQKVTQAQ-SSVSMPVR 151 (259)
T ss_dssp EEEESSCCGG------GCEEEEEEEECTTSSCEEECCCEEEEEEC-------------------CEEECCC-CCEEEETT
T ss_pred EEEECCCCcc------cCEEEEEEEeeCCccccEECCCCEEEEecCCC-CccccccccccccCCeeeEEeC-CEEEEcCC
Confidence 6999999766 9999999999986632 1 13444443100 000 00013444444 67889999
Q ss_pred CcEEEEeeecCc-CCceeEEe
Q psy11568 96 SGGRLDCAAQGS-PTPKIEWL 115 (116)
Q Consensus 96 ~~~~l~C~~~g~-P~p~i~W~ 115 (116)
+++.|.|.+.+. |.+.+.|+
T Consensus 152 ~~v~L~C~~~~~~~~~~v~W~ 172 (259)
T 3omz_A 152 KAVTLNCLYETSWWSYYIFWY 172 (259)
T ss_dssp CCEEECCEEECCCSSCEEEEE
T ss_pred CCEEEEEECCCccCCceEEEe
Confidence 999999999885 88999996
No 159
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.23 E-value=2.9e-10 Score=69.09 Aligned_cols=72 Identities=21% Similarity=0.206 Sum_probs=49.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-----EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-----SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-----~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
+|.|.++..+ |+|.|.|.+.+..+... ...|.|.... . .|.+.. + .. +.+|+.+.|.|
T Consensus 83 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~-~p~i~~-~-~~--~~~G~~v~L~C 145 (214)
T 2zg1_A 83 SLSIGDARME------DTGSYFFRVERGRDVKYSYQQNKLNLEVTALI------E-KPDIHF-L-EP--LESGRPTRLSC 145 (214)
T ss_dssp CEEECSCCGG------GCEEEEEEEEETTTEEEECCSSCEEEEEECCC------C-CCEEC----CC--CCTTCCEEEEE
T ss_pred EEEEccCCHh------hCceEEEEEEcCCCceeeecCCceEEEEecCC------C-CCceec-C-cc--ccCCCeEEEEE
Confidence 7999999766 99999999998863322 2344444320 1 144432 2 22 56899999999
Q ss_pred eecCc----CCceeEEeC
Q psy11568 103 AAQGS----PTPKIEWLI 116 (116)
Q Consensus 103 ~~~g~----P~p~i~W~~ 116 (116)
.+.+. |.|.++|+.
T Consensus 146 ~~~~~~~~~p~p~v~W~~ 163 (214)
T 2zg1_A 146 SLPGSCEAGPPLTFSWTG 163 (214)
T ss_dssp ECTTCCSCSSCCEEEEES
T ss_pred EeccCCCCCCCceEEEeC
Confidence 99874 899999973
No 160
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.23 E-value=1.9e-10 Score=72.96 Aligned_cols=80 Identities=20% Similarity=0.203 Sum_probs=51.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcE-----eeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSV-----VSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~-----~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
.|.|.++..+ |+|.|.|.+.|..+...+ ..|.|..... +... ...+..+..+ ....+.+|+++.|
T Consensus 83 ~L~I~~v~~~------DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~-~~p~~~~~~p-~~~~v~~G~~v~L 154 (276)
T 3auv_A 83 TLTISSLQPE------DFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGG-GGSEVQLVES-GGGLVQPGGSLRL 154 (276)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCCCCCCEEEEC------------------CCEEEEE-CCEEECTTCCEEE
T ss_pred EEEEccCChh------hCEEEEEEEecCCcccccCCEEEEEecCCCccccccccc-cCcceEEECC-CceEecCCCeEEE
Confidence 7999999766 999999999998654222 3444433100 0000 0102233344 5678899999999
Q ss_pred EeeecCcC--CceeEEe
Q psy11568 101 DCAAQGSP--TPKIEWL 115 (116)
Q Consensus 101 ~C~~~g~P--~p~i~W~ 115 (116)
.|.+.+.| .|.+.|+
T Consensus 155 ~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 155 SCAASGFTISDYWIHWV 171 (276)
T ss_dssp EEEEESSCGGGSEEEEE
T ss_pred EEEecCccCCCCEEEEE
Confidence 99999876 5899997
No 161
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.23 E-value=4.7e-11 Score=65.50 Aligned_cols=60 Identities=18% Similarity=0.189 Sum_probs=42.8
Q ss_pred CcEEEEEccCCeeeeccccceE--Ee-e----CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRI--AL-S----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~--~~-~----~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.|+| ++||+++........ .. . .+.|.|.++..+ |+|.|+|.|.|..|.... ..|.|.
T Consensus 30 ~P~i~W-~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~A~N~~G~~~~~~~l~V~ 97 (103)
T 1wwb_X 30 KPALQW-FYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHM------NNGDYTLIAKNEYGKDEKQISAHFM 97 (103)
T ss_dssp CCEEEE-EETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGG------GCEEEEEEEECSSCEEEEEEEECCS
T ss_pred CCEEEE-EECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcc------cCEEEEEEEEeCCCcEeEEEEEEEC
Confidence 489999 999999875432211 11 1 224999999766 999999999999998774 444443
No 162
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.23 E-value=4.5e-10 Score=70.45 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=52.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--E---EEEEEEEeCcE----------e-eeeccCCCceEecCCCeEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--L---SRFVHVKAGSV----------V-SLLDIQGPLFRIEPPYRFE 91 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~---~~~~~v~~~~~----------~-~~~~~~~p~~~~~~~~~~~ 91 (116)
.|.|.++..+ |+|.|.|.+.|..+.. . ...|.|..... . ..... .|.+...+ ....
T Consensus 77 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~p-~~~~ 148 (256)
T 3tf7_C 77 HLRKASVHRS------DSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGS-EAAVTQSP-RNKV 148 (256)
T ss_dssp EEEESSCCGG------GCSEEEEEEECTTCTTCEEECCCEEEEEEC----------------------CCEEESC-SEEE
T ss_pred EEEECCCCcc------cCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcC-ccEEEecC-CEEE
Confidence 6999999766 9999999999976421 1 13344443000 0 00001 15555555 7788
Q ss_pred EeCCCcEEEEeeecCcCCceeEEe
Q psy11568 92 FSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 92 ~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+.+|+++.|.|.+.+. .|.+.|+
T Consensus 149 v~~G~~v~L~C~~~~~-~~~v~W~ 171 (256)
T 3tf7_C 149 TVTGENVTLSCRQTNS-HNYMYWY 171 (256)
T ss_dssp EETTCCEEECEEECSC-CSEEEEE
T ss_pred EeCCCcEEEEEEcCCC-ceEEEEE
Confidence 8899999999999887 7899996
No 163
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.23 E-value=1.1e-11 Score=76.27 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=60.2
Q ss_pred cEEEEEccCCeeeeccccc-eEE------eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIA------LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~------~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~ 73 (116)
|.|+| +++|..+...... ... ...+.|.|.++..+ |+|.|+|.+.|..+... ...+... +.
T Consensus 45 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~g~Y~C~~~~~~~~~~~~~~v~~~----~~ 113 (218)
T 2rgs_A 45 VQISW-FVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM------SGKEFKCKVNNKDLPSPIERTISKI----KG 113 (218)
T ss_dssp EEEEE-EETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH------TTCCEEEEEEETTCSSCEEEEECCC----CC
T ss_pred eEEEE-EECCccccCcccccccccCCCeEEEEEEEEEcHHHcC------CCCeEEEEEECCcCCCcceEEEeec----CC
Confidence 68999 8888776431110 001 11236889888665 99999999999876441 2222110 00
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeeecC-cCCc-eeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG-SPTP-KIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~p-~i~W~ 115 (116)
...+ |.+...++... ...|+.+.|.|.+.| .|.| .++|+
T Consensus 114 -~~~~-P~v~~~~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~ 154 (218)
T 2rgs_A 114 -LVRA-PQVYILPPPAE-QLSRKDVSLTCLVVGFNPGDISVEWT 154 (218)
T ss_dssp -CCBC-CEEEEECCCGG-GTTSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred -CCCC-CEEEEECCChH-HhcCCceEEEEEEEeeeCCCcEEEEE
Confidence 0112 55544432221 135899999999999 5766 89996
No 164
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.23 E-value=3.2e-11 Score=63.99 Aligned_cols=49 Identities=14% Similarity=0.236 Sum_probs=37.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|.|+| ++||+++...........++ .|.|.++..+ |+|.|+|.|.|..
T Consensus 24 ~p~v~W-~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 24 GGPVRW-YKDGERLASQGRVQLEQAGARQVLRVQGARSG------DAGEYLCDAPQDS 74 (84)
T ss_dssp STTCEE-EETTEECCCCSSEEEEECSSCEEEEESSCSST------TCEEEEEECTTTC
T ss_pred CcEEEE-EECCEEccccccEEEeecCCeEEEEecCCCCc------ccEEEEEEECCEE
Confidence 377999 99999997644444444433 6999999766 9999999997764
No 165
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.23 E-value=2.1e-10 Score=71.85 Aligned_cols=80 Identities=15% Similarity=0.236 Sum_probs=53.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcC-----------CCceE--EEEEEEEeCcEeeee------ccCCCceEecCCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNE-----------AGVIL--SRFVHVKAGSVVSLL------DIQGPLFRIEPPY 88 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~-----------~g~~~--~~~~~v~~~~~~~~~------~~~~p~~~~~~~~ 88 (116)
.|.|.++..+ |+|.|.|.+.|. ..... ...|.|..... ... ....+.+...+ .
T Consensus 86 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~-~~~~~~~~~~~~~~~~~~~~-~ 157 (256)
T 3juy_B 86 YMELRSLRSA------DTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGG-GSGGGGSGGGGSEIVLTQAP-G 157 (256)
T ss_dssp EEEECSCCGG------GCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC-----------CCCCCCEEEEC-S
T ss_pred EEEECCCCcc------cCEEEEEeEEeccccccccccccceeEECCceEEeecCCcc-cccccccCCCcceeEEEecC-C
Confidence 5999999766 999999999997 11111 13344443100 000 00014455555 7
Q ss_pred eEEEeCCCcEEEEeeecCcCC-ceeEEe
Q psy11568 89 RFEFSNESGGRLDCAAQGSPT-PKIEWL 115 (116)
Q Consensus 89 ~~~~~~g~~~~l~C~~~g~P~-p~i~W~ 115 (116)
...+.+|+++.|.|.+.+.|. |.+.|+
T Consensus 158 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~ 185 (256)
T 3juy_B 158 TLSLSPGERATFSCRSSHSIRSRRVAWY 185 (256)
T ss_dssp EEEECTTSCEEEEEEESSCCTTCCEEEE
T ss_pred eEEEeCCCCEEEEEEECCCcCCeeEEEE
Confidence 888999999999999999886 899996
No 166
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.22 E-value=9.5e-11 Score=63.10 Aligned_cols=59 Identities=20% Similarity=0.265 Sum_probs=45.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.++| +++|.++.. ..+....++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..
T Consensus 28 ~p~v~W-~k~g~~~~~--~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~ 87 (95)
T 4hwu_A 28 AAVISW-TKDGVHLGP--NNRTVLIGEYLQIKGATPR------DSGLYACTAARTVDSETWIFMVNVTD 87 (95)
T ss_dssp TCEEEE-EETTEEECC--CSSEEEETTEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CCEEEE-EECCEECCC--CceEEEeCCEEEECcCCcc------cCEEEEEEEccCCCcEEEEEEEEEeC
Confidence 378999 899998864 3345566789999999766 999999999999986653 4455443
No 167
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.22 E-value=1.2e-10 Score=62.95 Aligned_cols=59 Identities=19% Similarity=0.293 Sum_probs=44.5
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|.| ++++..+...........++ .|.|.++..+ |+|.|+|.+.|..|...+ ..|.|
T Consensus 31 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V 92 (97)
T 2bk8_A 31 STQVTW-YFGVRQLENSEKYEITYEDGVAILYVKDITKL------DDGTYRCKVVNDYGEDSSYAELFV 92 (97)
T ss_dssp TCEEEE-EETTEECCSSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCEEEE-EECCEECcCCCCEEEEEcCCeEEEEEecCChh------hCeEEEEEEECCCCeEeEEEEEEE
Confidence 378999 89998886544433434555 8999999766 999999999999998775 44444
No 168
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.21 E-value=2.9e-10 Score=68.19 Aligned_cols=67 Identities=18% Similarity=0.241 Sum_probs=46.3
Q ss_pred eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 25 SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 25 ~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.+++|.|.+++.+ |+|.|.|.+.+.. ... ...|.|..+ ...|.+.. .+..+.|.|.
T Consensus 67 ~~~sL~I~~v~~~------D~G~Y~C~v~~~~-~~~~~~~L~V~~~-------~~~P~i~~---------~~~~v~L~C~ 123 (180)
T 2dru_A 67 TNGALRIYNVSKE------DRGDYYMRMLHET-EDQWKITMEVYEM-------VSKPMIYW---------ECSNATLTCE 123 (180)
T ss_dssp TTCCEEECSCCGG------GCEEEEEEEESSS-EEEEEEEEEEECC-------CCCCEEEE---------EGGGTEEEEE
T ss_pred CCccEEEcCCCHH------HCeEEEEEEEcCC-eEEEEEEEEEECC-------CCCCEEEe---------cCCCEEEEEE
Confidence 4568999999766 9999999998776 222 244544432 01133322 3467999999
Q ss_pred e-cCcCCceeEEe
Q psy11568 104 A-QGSPTPKIEWL 115 (116)
Q Consensus 104 ~-~g~P~p~i~W~ 115 (116)
+ .| |.|.++|+
T Consensus 124 ~~~g-p~p~i~W~ 135 (180)
T 2dru_A 124 VLEG-TDVELKLY 135 (180)
T ss_dssp CSSC-TTCEEEEE
T ss_pred eCCC-CCCEEEEE
Confidence 9 66 99999997
No 169
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.21 E-value=8.2e-11 Score=63.44 Aligned_cols=56 Identities=18% Similarity=0.283 Sum_probs=43.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVH 65 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~ 65 (116)
+|.|.| +++|..+.. ..++...++.|.|.++..+ |+|.|.|.|.|..|.... ..|.
T Consensus 37 pp~i~W-~k~g~~~~~--~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~ 93 (95)
T 2ckn_A 37 VQSINW-LRDGVQLVE--SNRTRITGEEVEVRDSIPA------DSGLYACVTSSPSGSDTTYFSVN 93 (95)
T ss_dssp CCEEEE-EBTTBCCCC--CSSEEECSSEEEESSCCGG------GSEEEEEEEEETTEEEEEEEEEE
T ss_pred CCceEE-EECCEecCC--CCCEEEeCCEEEECCCChH------HCEEEEEEeccCCCcEEEEEEEE
Confidence 368999 889988764 2345556789999999766 999999999999987653 4343
No 170
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.21 E-value=3.1e-11 Score=85.43 Aligned_cols=97 Identities=20% Similarity=0.265 Sum_probs=36.6
Q ss_pred cEEEEEccCCeeeeccccc----------eEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDL----------RIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGS 70 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~----------~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~ 70 (116)
+.+.| +++|..+...... ........|.|.++..+ |+|.|+|.+.|..|... ...|.|...
T Consensus 256 ~~~~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~~~~~~~~~~~~~l~V~~~- 327 (772)
T 3v2a_R 256 IDFNW-EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS------DQGLYTCAASSGLMTKKNSTFVRVHEK- 327 (772)
T ss_dssp CEEEE-ECC--------CEEEEC-----CCCEEEEEEEEESSCCST------TCSEEEEEEECSSCEEEEEEEEEEECC-
T ss_pred eeEEE-ecCCccCCCceeeeccccccccccceEEEEEEEECcCCcC------CCeEEEEEEEcCCcceeEEEEEEEeCC-
Confidence 47899 7787765421111 11112337999999766 99999999999987654 345555543
Q ss_pred EeeeeccCCCceEecC--CCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 71 VVSLLDIQGPLFRIEP--PYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 71 ~~~~~~~~~p~~~~~~--~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ +....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 328 ---------p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~ 365 (772)
T 3v2a_R 328 ---------PFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWY 365 (772)
T ss_dssp ---------CC------------------------------------
T ss_pred ---------CeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEE
Confidence 4333222 24566788999999999999999999996
No 171
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.21 E-value=1.6e-10 Score=71.91 Aligned_cols=80 Identities=14% Similarity=0.092 Sum_probs=50.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcE----eeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSV----VSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~----~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.|..+...+ ..|.|..+.. +...... +..+..+ ....+.+|+++.|.
T Consensus 72 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~-~~~~~~~-~~~~v~~G~~v~L~ 143 (242)
T 2znx_A 72 TLSINSVETE------DFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGS-DIQLQES-GPSLVKPSQTLSLT 143 (242)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEEC----------------CCEEEEE-CCSEECTTSCEEEE
T ss_pred EEEECCCChH------HCEEEEEeEecCCceEECCCEEEEEcCCCCCCccccccccc-ceeeecC-CcceecCCCeEEEE
Confidence 7999999766 999999999998654332 3444443200 0000000 2233333 22357899999999
Q ss_pred eeecCcC--CceeEEe
Q psy11568 102 CAAQGSP--TPKIEWL 115 (116)
Q Consensus 102 C~~~g~P--~p~i~W~ 115 (116)
|.+.|.| .|.+.|+
T Consensus 144 C~~~g~~~~~~~v~W~ 159 (242)
T 2znx_A 144 CSVTGDSITSDYXSXI 159 (242)
T ss_dssp EEEESSCGGGSCEEEE
T ss_pred EEEEccccCCcceeeE
Confidence 9999876 5789997
No 172
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.20 E-value=1.5e-10 Score=63.02 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=45.0
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|+| +++|..+...........++ .|.|.++..+ |+|.|+|.|.|..|...+ ..|.|..
T Consensus 37 ~p~i~W-~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 37 TAEVKW-YHNGVELQESSKIHYTNTSGVLTLEILDCHTD------DSGTYRAVCTNYKGEASDYATLDVTG 100 (103)
T ss_dssp CCEEEE-EETTEECCCCSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEE-EECCEECCCCCCEEEEECCCEEEEEEcCCCcc------cCEEEEEEEEeCCCcEEEEEEEEEEC
Confidence 478999 99999886544333333333 6999999766 999999999999998764 5555543
No 173
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.20 E-value=3.4e-11 Score=64.65 Aligned_cols=56 Identities=21% Similarity=0.239 Sum_probs=39.9
Q ss_pred CcEEEEEccCC--eeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEE
Q psy11568 1 MYVLLWLIRDN--TVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVH 65 (116)
Q Consensus 1 ~p~v~W~~~~g--~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~ 65 (116)
.|.|+| +++| .++... ....... ..|.|.++..+ |+|.|+|.|.|..|.... ..|.
T Consensus 31 ~p~i~W-~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~N~~G~~~~~~~l~ 91 (93)
T 1wit_A 31 DPTATW-TVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRA------DSGNYKLKVKNELGEDEAIFEVI 91 (93)
T ss_dssp SCEEEE-ECSTTTCBCSTT--SEEEEETTEEEEECTTBCGG------GCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEE-EECCCCcccCCc--EEEEecCCEEEEEECCCChh------cCEEEEEEEEcCCCeEEEEEEEE
Confidence 478999 8888 776532 2222222 36999999766 999999999999997653 4343
No 174
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.20 E-value=6.8e-11 Score=72.14 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=50.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc---eE---EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV---IL---SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~---~~---~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.|..|. .. ...|.|.... .. .|.+...+ .......|+.+.|.
T Consensus 76 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-----~~-~P~~~~~~-~~~~~~~~~~v~L~ 142 (218)
T 3s96_B 76 YLSISNIQPE------DEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP-----KS-TPTLTVFP-PSSEELKENKATLV 142 (218)
T ss_dssp EEEESSCCGG------GCEEEEEEEEEEETTEEEEEECCCEEEEEESCC-----CB-CCEEEEEC-CCHHHHHTTEEEEE
T ss_pred EEEEccCCcc------cCEEEEEEEecCCCCceeEEEcCcEEEEEecCC-----CC-CceEEeeC-CCcccccCCcEEEE
Confidence 6999999766 999999999998762 11 1344444210 01 25555444 22333457899999
Q ss_pred eeecC-cCCc-eeEEe
Q psy11568 102 CAAQG-SPTP-KIEWL 115 (116)
Q Consensus 102 C~~~g-~P~p-~i~W~ 115 (116)
|.+.| .|.| .++|+
T Consensus 143 C~~~g~~p~~~~v~W~ 158 (218)
T 3s96_B 143 CLISNFSPSGVTVAWK 158 (218)
T ss_dssp EEEEEEBSSCCEEEEE
T ss_pred EEECcccCCCeEEEEE
Confidence 99998 5777 89997
No 175
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=7.3e-11 Score=64.05 Aligned_cols=61 Identities=15% Similarity=0.291 Sum_probs=44.1
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.+.| +++|..+...........++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..
T Consensus 37 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 37 LPVISW-LKEGFTFPGRDPRATIQEQGTLQIKNLRIS------DTGTYTCVATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp CCEEEE-EESSSEESSSCSSCEECTTCCEEEESCCTT------TCCEEEEEEECSSCCCBCCEEEEEES
T ss_pred CCEEEE-EECCEECCCCCCCEEEcCCCEEEEccCCcc------cCEEEEEEEEcCCCCEEEEEEEEEec
Confidence 378999 888888763222223345668999999766 999999999999987763 5555543
No 176
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.20 E-value=2e-10 Score=73.50 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=50.0
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCC-CceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEA-GVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA 104 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 104 (116)
.+|.|.++..+ |+|.|+|.+.|.. |.... ..+.+..... +.+...+ .......|+.+.|.|.+
T Consensus 74 ~sL~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~--------~~~~~~~-~~~~~~~~~~~~l~C~~ 138 (308)
T 4fom_A 74 ATITLHNIGFS------DSGKYICKAVTFPLGNAQSSTTVTVLVEPT--------VSLIKGP-DSLIDGGNETVAAICIA 138 (308)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEETTTEEEEEEEEEEEEBCCE--------EEEEECS-SCCCTTCSCEEEEEEEE
T ss_pred eEEEEccCCHH------HCEEEEEEEeeCCCcceeeeeEEEeeeccc--------ccccccc-ceeEEcCCceEEEEEEe
Confidence 46999999766 9999999998874 43332 3344443210 1222222 34444568899999975
Q ss_pred -cCcCCceeEEeC
Q psy11568 105 -QGSPTPKIEWLI 116 (116)
Q Consensus 105 -~g~P~p~i~W~~ 116 (116)
.|.|.|.++|+.
T Consensus 139 ~~g~P~~~i~W~~ 151 (308)
T 4fom_A 139 ATGKPVAHIDWEG 151 (308)
T ss_dssp EEEBSCCEEEECC
T ss_pred cCCcCCceEEEEE
Confidence 689999999973
No 177
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.20 E-value=1.9e-10 Score=62.15 Aligned_cols=60 Identities=22% Similarity=0.368 Sum_probs=43.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.+.| +++|..+....+......++ .|.|.++..+ |+|.|+|.+.|..|.... ..|.|.
T Consensus 35 ~p~v~W-~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 35 RPTAIW-TKDGKAITQGGKYKLSEDKGGFFLEIHKTDTS------DSGLYTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp CCEEEE-EETTEECCSSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEE-EECCEECcCCCCEEEEEeCCEEEEEECCCCcc------cCEEEEEEEEeCCCcEeEEEEEEEE
Confidence 378999 88999886543333333333 6999999766 999999999999987764 445443
No 178
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=1e-10 Score=63.92 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=42.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~ 68 (116)
.|.|+| ++||.++....+.+....+. .|.|.++..+ |+|.|+|.|.|.. ...+..|.|..
T Consensus 34 ~p~v~W-~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~-~~~~a~L~V~~ 95 (100)
T 2yuz_A 34 NIPGKW-TKNGLPVQESDRLKVVQKGRIHKLVIANALTE------DEGDYVFAPDAYN-VTLPAKVHVIS 95 (100)
T ss_dssp CCCEEE-EETTEECCCCSSEEEEECSSEEEEEESSCCGG------GCSEEEEEESSSC-CCEEEEEEEEC
T ss_pred CCeEEE-EECCEECCCCCcEEEEEeCCEEEEEECCCChh------hCEEEEEEEcCCC-eeEEEEEEEeC
Confidence 378999 99999987544434333333 6999999766 9999999999982 22235555554
No 179
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.19 E-value=9.5e-11 Score=71.82 Aligned_cols=75 Identities=20% Similarity=0.375 Sum_probs=51.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce-E---EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-L---SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~---~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.+..+.. . ...|.|... ... .|.+...++. ..+.+|+.+.|.|.
T Consensus 82 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~~~-~~~~~g~~v~L~C~ 148 (220)
T 1pz5_B 82 YLQMNNLRAE------DTGIYYCTRGGAVGAMDYWGQGTSVTVSSA-----TTT-APSVYPLVPG-CSDTSGSSVTLGCL 148 (220)
T ss_dssp EEEECSCCGG------GCEEEEEEEECTTSSEEEECCCEEEEECSS-----CCB-CCEEEEECCC-SCCSCSSSEEEEEE
T ss_pred EEEEccCCHH------HCEEEEEEEecCCcccceECCCEEEEEccC-----CCC-CCeEEEcccc-cccCCCCcEEEEEE
Confidence 7999999766 9999999999986432 1 133444321 001 2554443312 23467999999999
Q ss_pred ecCc-CCc-eeEEe
Q psy11568 104 AQGS-PTP-KIEWL 115 (116)
Q Consensus 104 ~~g~-P~p-~i~W~ 115 (116)
+.|. |.| .++|+
T Consensus 149 ~~g~~P~p~~v~W~ 162 (220)
T 1pz5_B 149 VKGYFPEPVTVKWN 162 (220)
T ss_dssp EEEEBSSCCEEEEG
T ss_pred EEEEeCCCeEEEEe
Confidence 9998 989 99996
No 180
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.19 E-value=2e-10 Score=62.22 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=43.9
Q ss_pred CcEEEEEccCCeeeeccccceEE-eeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~-~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.|.| +++|.++......+.. ..++ .|.|.++..+ |+|.|+|.+.|..|.... ..|.|.
T Consensus 34 ~p~v~W-~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 34 APDVSW-YLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRAS------DAGAYACVAKNRAGEATFTVQLDVL 97 (100)
T ss_dssp CCEEEE-EETTEEECCCSSSCEEEETTTEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEE-EECCEECcCCCcEEEEEcCCCeEEEEECCCCcc------cCEEEEEEEEcCCCeEEEEEEEEEE
Confidence 378999 8999988754333333 3344 7999999766 999999999999988663 455544
No 181
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.19 E-value=1.5e-10 Score=62.55 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=43.6
Q ss_pred CcEEEEEccCCeeeeccccceEE-eeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIA-LSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~-~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.|.| +++|..+......... ..++ .|.|.++..+ |+|.|+|.|.|..|...+ ..|.|.
T Consensus 34 ~p~v~W-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 34 DPECEW-YKNGVKIERSDRIYWYWPEDNVCELVIRDVTGE------DSASIMVKAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp CCEEEE-EETTEECCCCSSEEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEE-EECCEECCCCCCEEEEEcCCCEEEEEECCCCcC------CCEEEEEEEEECCCcEEEEEEEEEe
Confidence 378999 9999988753332222 2333 6999999766 999999999999987774 445443
No 182
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.18 E-value=7.3e-10 Score=69.98 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=51.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE--EEEEEEEeCcE--------eeeeccCCCc-eEecCCCeEEEeCCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHVKAGSV--------VSLLDIQGPL-FRIEPPYRFEFSNES 96 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~--~~~~~v~~~~~--------~~~~~~~~p~-~~~~~~~~~~~~~g~ 96 (116)
.|.|.++..+ |+|.|.|.+.+..+... ...|.|..+.. ........|. .+..+ ....+.+|+
T Consensus 82 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~ 154 (264)
T 2gjj_A 82 TLTIGSVKAE------DLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQS-GPEVVKTGA 154 (264)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEEC-CCEEECTTC
T ss_pred EEEECCCCHH------HCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCC-CCEEEcCCC
Confidence 7999999766 99999999999865332 23455543200 0000000022 22333 234688999
Q ss_pred cEEEEeeecCcCC--ceeEEe
Q psy11568 97 GGRLDCAAQGSPT--PKIEWL 115 (116)
Q Consensus 97 ~~~l~C~~~g~P~--p~i~W~ 115 (116)
++.|.|.+.+.|. +.+.|+
T Consensus 155 ~v~L~C~~~~~~~~~~~v~W~ 175 (264)
T 2gjj_A 155 SVKISCKASGYSFTGYFINWV 175 (264)
T ss_dssp CEEEEEEEESSCGGGSEEEEE
T ss_pred cEEEEEEEeCCccCCeEEEEE
Confidence 9999999998874 899997
No 183
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.18 E-value=5e-11 Score=73.50 Aligned_cols=74 Identities=19% Similarity=0.282 Sum_probs=50.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.+..+.... ..+.|... .. .|.+...+ ....+..|+.+.|.|.+.
T Consensus 95 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~-~p~v~~~~-~~~~~~~g~~v~l~C~~~ 160 (237)
T 3sob_L 95 TLTISSLQPE------DFATYYCQQSYTTPPTFGQGTKVEIKRT------VA-APSVFIFP-PSDEQLKSGTASVVCLLN 160 (237)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEEEECC------CB-CCEEEEEC-CCHHHHHHTEEEEEEEEE
T ss_pred EEEECCCChh------hCeEEEEeeccCCceEEcCcEEEEEecC------CC-CCceEEeC-CChhhccCCceEEEEEEc
Confidence 6999999766 999999999988754332 34444321 11 25555444 222334588899999999
Q ss_pred Cc-C-CceeEEe
Q psy11568 106 GS-P-TPKIEWL 115 (116)
Q Consensus 106 g~-P-~p~i~W~ 115 (116)
|. | .|.++|+
T Consensus 161 ~~~p~~~~v~W~ 172 (237)
T 3sob_L 161 NFYPREAKVQWK 172 (237)
T ss_dssp EEBSSCCEEEEE
T ss_pred ccCCCceEEEEE
Confidence 84 4 5899997
No 184
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.18 E-value=4.8e-11 Score=75.65 Aligned_cols=94 Identities=11% Similarity=0.136 Sum_probs=56.1
Q ss_pred EEEEccCCeeeeccccceEEee----CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE--EEEEEEEeCcEeeeecc
Q psy11568 4 LLWLIRDNTVIAYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHVKAGSVVSLLDI 77 (116)
Q Consensus 4 v~W~~~~g~~~~~~~~~~~~~~----~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~--~~~~~v~~~~~~~~~~~ 77 (116)
|+| +++|..+.. . ..... .+.|.|.++..+ |+|.|+|.+.|..|... +..+.|... ..
T Consensus 28 v~W-~~~~~~~~~--~-~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~~~~~~~~v~v~------~p 91 (289)
T 3mjg_X 28 VVW-ERMSQEPPQ--E-MAKAQDGTFSSVLTLTNLTGL------DTGEYFCTHNDSRGLETDERKRLYIFVP------DP 91 (289)
T ss_dssp CEE-EBTTBCCSE--E-EEECTTSCEEEEEEECSCCGG------GCEEEEEECCC------CCCEEEEEECC------CT
T ss_pred EEE-ECCCCCccc--c-eeccCCCceeEEEEEccCChh------hCEEEEEEEcccCCCCcCcEEeEEEEEE------CC
Confidence 789 888887631 1 11111 237999999766 99999999999887632 233333221 00
Q ss_pred CCCceEecCCC--eEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPY--RFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~--~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...++...+. ...+.+|+.+.|.|.+. .|.|.++|+
T Consensus 92 -~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~ 129 (289)
T 3mjg_X 92 -TVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLH 129 (289)
T ss_dssp -TCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEE
T ss_pred -CcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEE
Confidence 0112111111 26788899999999998 788888885
No 185
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.18 E-value=1.7e-11 Score=74.82 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=58.8
Q ss_pred EEEEEccCCeeeeccc-cceEEe------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeee
Q psy11568 3 VLLWLIRDNTVIAYVK-DLRIAL------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSL 74 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~-~~~~~~------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~ 74 (116)
.|+| ++++..+.... ...... ....|.|.++..+ |+|.|+|.+.|..+... ...+.+.. .
T Consensus 38 ~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~~~~~~~~~~~~v~~~~----~- 105 (207)
T 2vol_A 38 QFSW-FVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWL------NGKEFKCRVNSAAFPAPIEKTISKTK----G- 105 (207)
T ss_dssp EEEE-EETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHH------TTCCEEEEEECTTCSSCEEEEECCCC----C-
T ss_pred EEEE-EECCccccccccCCCcCcCCCcEEEEEEEEEehhHcC------CCCEEEEEEEccCCCCceEEEeccCC----C-
Confidence 8999 77777664211 000011 1236888888665 99999999999987532 22221100 0
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCc-CC-ceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~ 115 (116)
...+ |.+...+... ....|+.+.|.|.+.|. |. +.++|+
T Consensus 106 ~~~~-P~v~~~~~~~-~~~~g~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 2vol_A 106 RPKA-PQVYTLPPPK-EQMAKDKVSLTCMITDFFPEDITVEWE 146 (207)
T ss_dssp CCBC-CEEEEECCCT-GGGSSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCcC-CeEEEeCCCH-HHhcCCceEEEEEEeeEECCCCEEEEE
Confidence 0112 5554443221 12358999999999985 54 389996
No 186
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.18 E-value=1.3e-10 Score=74.70 Aligned_cols=95 Identities=14% Similarity=0.191 Sum_probs=61.4
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc----eEE--EEEEEEeCcEeeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV----ILS--RFVHVKAGSVVSLL 75 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~----~~~--~~~~v~~~~~~~~~ 75 (116)
|.+.| +++|..+... ......++.|.|.++..+ |+|.|+|.+.|..+. ..+ ..|.|...
T Consensus 52 ~~~~W-~k~g~~~~~~--~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~------ 116 (316)
T 3vh8_G 52 NNFML-YKEDRIHIPI--FHGRIFQESFNMSPVTTA------HAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGN------ 116 (316)
T ss_dssp CSEEE-EESSCSSSCH--HHHCCBSSCEEECSCCGG------GCEEEEEEEBCSSSSSSBCCCCCCEEEEEECS------
T ss_pred ceEEE-EeCCCcccee--ecCCcceEEEEECCCCcc------cCeEEEEEEEcCCCCcceecCCCcEEEEEecC------
Confidence 67899 8888765421 111224568999999766 999999999864321 112 34444331
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...|.+...+ ... +.+|+++.|.|.+. .+.+.+.|+
T Consensus 117 -~~~p~~~~~~-~~~-v~~G~~v~L~C~~~-~~~~~~~w~ 152 (316)
T 3vh8_G 117 -HRKPSLLAHP-GPL-VKSGERVILQCWSD-IMFEHFFLH 152 (316)
T ss_dssp -SCCCEEEEES-CSE-EETTCCEEEEEEES-SCCSEEEEE
T ss_pred -CCCCeEEecC-CCc-cCCCCeEEEEEcCC-CCCcEEEEE
Confidence 1125665555 333 78899999999995 456678885
No 187
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.18 E-value=4.1e-10 Score=71.08 Aligned_cols=80 Identities=14% Similarity=0.133 Sum_probs=49.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCC--------------ceEecCCCeEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGP--------------LFRIEPPYRFE 91 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p--------------~~~~~~~~~~~ 91 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|..... .......| ..+..+ ....
T Consensus 91 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~-~~~p~~pp~~~~~~~~~~~~~~v~~~~~-~~~~ 162 (268)
T 1x9q_A 91 TLKINRVEAE------DLGVYFCSQSTHVPWTFGGGTKLEIKSSAD-DAKKDAAKKDDAKKDDAKKDGGVKLDET-GGGL 162 (268)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCEECCCEEEC-------------------------CGGGCEEEEE-CCEE
T ss_pred EEEECCCChh------HCEEEEEEEecCCCceEcCCEEEEEccCcc-CCCccccccccccccccccccceEEECC-CceE
Confidence 7999999766 999999999998653321 3344432100 00000001 122333 4568
Q ss_pred EeCCCcEEEEeeecCcCC--ceeEEe
Q psy11568 92 FSNESGGRLDCAAQGSPT--PKIEWL 115 (116)
Q Consensus 92 ~~~g~~~~l~C~~~g~P~--p~i~W~ 115 (116)
+.+|+++.|.|.+.+.|. +.+.|+
T Consensus 163 v~~G~~v~L~C~~~~~~~~~~~v~W~ 188 (268)
T 1x9q_A 163 VQPGGAMKLSCVTSGFTFGHYWMNWV 188 (268)
T ss_dssp ECTTCCEEEEEEEESSCGGGCEEEEE
T ss_pred ecCCCcEEEEEEecCccccccEEEEE
Confidence 889999999999998764 889996
No 188
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.17 E-value=3e-11 Score=78.76 Aligned_cols=75 Identities=19% Similarity=0.305 Sum_probs=50.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|.|.+.|..+... ...|.|.... .. .|.+...++ ...+..|+.+.|.|.+.|
T Consensus 80 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~l~V~~~~-----~~-~P~i~~~~~-~~~~~~g~~v~L~C~~~g 146 (344)
T 1za6_B 80 YVELSSLRSE------DTAVYFCTRSLNMAYWGQGTLVTVSSAS-----TK-GPSVFPLAP-SSKSTSGGTAALGCLVKD 146 (344)
T ss_dssp EEEECSCCGG------GCEEEEEEETTTTCEECCCEEEEECSSC-----CB-CCEEEEECC-SCTTTSSSEEEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEecCcceecCcEEEEEecCC-----CC-CCeEEEccc-cccccCCCcEEEEEEEee
Confidence 7999999766 99999999999653322 2344444210 01 144443331 223467999999999999
Q ss_pred c-CC-ceeEEe
Q psy11568 107 S-PT-PKIEWL 115 (116)
Q Consensus 107 ~-P~-p~i~W~ 115 (116)
. |. |.++|+
T Consensus 147 ~~P~~~~v~W~ 157 (344)
T 1za6_B 147 YFPEPVTVSWN 157 (344)
T ss_dssp EBSSCCCEEET
T ss_pred EECCCeEEEEe
Confidence 7 64 799996
No 189
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.17 E-value=2.8e-11 Score=81.22 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=60.9
Q ss_pred cEEEEEccCCeeeeccccc-eEEe------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIAL------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~~------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~ 73 (116)
+.|+| +++|..+...... .... ..+.|.|.++..+ |+|.|+|.|.|..|... ...+.+..
T Consensus 274 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~n~~~~~~~~~~v~~~~----- 341 (444)
T 1igt_B 274 VQISW-FVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWM------SGKEFKCKVNNKDLPAPIERTISKPK----- 341 (444)
T ss_dssp CEEEE-EETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHH------TTCEEEEEEECTTCSSCEEEEEECCC-----
T ss_pred eEEEE-EECCccccCcccccceeCCCCcEEEEEEEEEcHHHhc------cCCcEEEEEEcCCCCCceEEEEeccC-----
Confidence 48999 8888887532111 1111 1236999999666 99999999999987653 22222100
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeeecC-cCCc-eeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG-SPTP-KIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~p-~i~W~ 115 (116)
....+ |.+...++....+ .+..+.|.|.+.| .|.| .++|+
T Consensus 342 ~~~~~-P~v~~~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~ 383 (444)
T 1igt_B 342 GSVRA-PQVYVLPPPEEEM-TKKQVTLTCMVTDFMPEDIYVEWT 383 (444)
T ss_dssp CCCBC-CEEEEECCCGGGT-TSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCCCC-CEEEEeCCChHHc-cCCeEEEEEEEEeeeCCCCEEEEE
Confidence 00112 5554443222222 3445999999999 4666 89997
No 190
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=3.7e-10 Score=63.11 Aligned_cols=60 Identities=10% Similarity=0.086 Sum_probs=43.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|+| +++|..+.. .+......++ .|.|.++..+ |+|.|+|.|.|..|.... ..|.|..
T Consensus 53 ~p~i~W-~k~g~~l~~-~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 53 RPQVVW-TKGGAPLDT-SRVHVRTSDFDTVFFVRQAARS------DSGEYELSVQIENMKDTATIRIRVVE 115 (118)
T ss_dssp CCEEEE-EETTEECCC-SSCEEEECSSEEEEEESSCCTT------TCEEEEEEEECSSCEECCEEEEEEEC
T ss_pred CCEEEE-EECCEECCC-CcEEEEECCCeEEEEECCCChh------cCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 378999 899998862 2333333333 4999999766 999999999999996653 5555543
No 191
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.16 E-value=2.2e-10 Score=72.59 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=46.8
Q ss_pred CceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 44 HSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 44 d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|+|.|+|.|.|..+...+ ..+.+... . .|.+...+ ....+.+|+++.|.|.+.|.|.|.++|+
T Consensus 152 d~G~Y~C~a~n~~~~~~s~~~~l~v~~~-------~-~p~i~~~~-~~~~v~~G~~v~L~C~~~g~p~p~v~W~ 216 (289)
T 3mjg_X 152 EDRSYICKTTIGDREVDSDAYYVYRLQV-------S-SINVSVNA-VQTVVRQGENITLMCIVIGNEVVNFEWT 216 (289)
T ss_dssp CSSEEEEEEEETTEEEECCCEEEEECCC-------C-CCCCEEEE-SCSEEETTSCEEEEEEEESCSSBEEEEE
T ss_pred cCcEEEEEEEeCCceeeeeeEEEEecCC-------C-CCCcEEeC-CcceeEcCCCEEEEEEECCCCCcceEEE
Confidence 899999999988765554 33333321 1 25555554 3456889999999999999999999997
No 192
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.16 E-value=2.3e-10 Score=61.82 Aligned_cols=59 Identities=20% Similarity=0.281 Sum_probs=41.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC---eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~---~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|.| +++|..+...........++ .|.|.++..+ |+|.|+|.|.|..|...+ ..|.|
T Consensus 34 ~p~v~W-~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~N~~g~~~~~~~l~V 96 (99)
T 1u2h_A 34 KPVVSW-LRNRQPVRPDQRRFAEEAEGGLCRLRILAAERG------DAGFYTCKAVNEYGARQCEARLEV 96 (99)
T ss_dssp CCEEEE-EETTEECCCBTTEEEEECGGGEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEE-EECCEECCCCCCEEEEECCCCEEEEEEccCCcC------CCEEEEEEEEECCCceeEEEEEEE
Confidence 378999 89998886432211122222 5999999766 999999999999987764 44444
No 193
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.16 E-value=9.7e-11 Score=71.52 Aligned_cols=74 Identities=16% Similarity=0.266 Sum_probs=49.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-ceE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-VIL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA 104 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-~~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 104 (116)
.|.|.++..+ |+|.|.|.+.|..+ ... ...|.|... .. .|.+...++... ...|+.+.|.|.+
T Consensus 73 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~------~~-~P~v~~~~~~~~-~~~g~~v~L~C~~ 138 (216)
T 2xzc_L 73 TLGITGLQTG------DEADYYCGTWDSSLNPVFGGGTKLEIKRT------VA-APSVFIFPPSDE-QLKSGTASVVCLL 138 (216)
T ss_dssp EEEECSCCGG------GCEEEEEEEECTTSCEEEBCCEEEEECCC------CB-CCEEEEECCCHH-HHHTTEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEEeCCCcceECCCEEEEEcCC------CC-CCceEEeCCChh-hccCCcEEEEEEE
Confidence 7999999766 99999999999876 222 133444321 01 255554332222 2358899999999
Q ss_pred cC-cCCc-eeEEe
Q psy11568 105 QG-SPTP-KIEWL 115 (116)
Q Consensus 105 ~g-~P~p-~i~W~ 115 (116)
.| .|.| .++|+
T Consensus 139 ~g~~P~~~~v~W~ 151 (216)
T 2xzc_L 139 NNFYPREAKVQWK 151 (216)
T ss_dssp EEEBSSCCEEEEE
T ss_pred EeEcCCceEEEEE
Confidence 98 4555 89997
No 194
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=8.5e-11 Score=65.76 Aligned_cols=54 Identities=20% Similarity=0.288 Sum_probs=41.4
Q ss_pred CcEEEEEccCCeeeeccccceEEe------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIAL------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++|+.+.......... ..+.|.|.++..+ |+|.|+|.|.|..|...+
T Consensus 34 ~p~i~W-~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~ 93 (118)
T 1wwc_A 34 PPTLHW-LHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHY------NNGNYTLIAKNPLGTANQ 93 (118)
T ss_dssp CCEEEE-EETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGG------GCEEEEEEEEETTEEEEE
T ss_pred CCeEEE-EECCEECCCCCceeEEEeccCccccEEEEECCCChh------cCEEEEEEEECCCCeEee
Confidence 478999 99999887543333222 3447999999766 999999999999998764
No 195
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.15 E-value=1e-10 Score=64.23 Aligned_cols=60 Identities=17% Similarity=0.362 Sum_probs=40.9
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
|.+.| +++|..+...........++.|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..
T Consensus 40 p~i~W-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 40 PQIMW-FKDNETLVEDSGIVLKDGNRNLTIRRVRKE------DEGLYTCQACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp CCEEE-EESSSBCCCBTTEEEETTTTEEEECSCCGG------GCEEEEEEEC----CEEEEEEEEEEC
T ss_pred CeEEE-EECCeEcccCCCeEEeCCCcEEEEeecCcc------cCEEEEEEEEeCCCceEEEEEEEEeC
Confidence 67999 888887764333333334568999999766 999999999999988774 5565554
No 196
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.15 E-value=2.6e-10 Score=71.46 Aligned_cols=97 Identities=12% Similarity=0.061 Sum_probs=62.0
Q ss_pred cEEEEEccCCeeeeccc-cceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce-EE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRDNTVIAYVK-DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~-~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~~--~~~~v~~~~~~~~~~~ 77 (116)
+.+.| +|+|..+.... .......++.|.|.++..+ |+|.|+|.+.|..+.. .+ ..|.|... .
T Consensus 35 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~-------~ 100 (242)
T 1p6f_A 35 VEYQL-HFEGSLFAVDRPKPPERINKVKFYIPDMNSR------MAGQYSCIYRVGELWSEPSNLLDLVVTEM-------Y 100 (242)
T ss_dssp CEEEE-EETTEEEEEECCSSCTTCCEEEEEECSCCGG------GCEEEEEEEEETTEECCCCCCEEEEEECC-------S
T ss_pred cEEEE-EECCCccccccccccCCcceeEEEecCCCcc------cCeEEEEEEecCCccccCCcceEEEeecc-------c
Confidence 46889 88888764211 1001112347999999766 9999999998865422 22 44444421 1
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
..|.+...+ . ..+.+|+++.|.|.+.+. .+.+.|+
T Consensus 101 ~~P~i~~~p-~-~~v~~G~~vtL~C~~~~~-~~~~~w~ 135 (242)
T 1p6f_A 101 DTPTLSVHP-G-PEVISGEKVTFYCRLDTA-TSMFLLL 135 (242)
T ss_dssp CCCEEEEES-C-SEEETTCEEEEEEECTTS-CSEEEEE
T ss_pred CCCceEccC-C-CccCCCCcEEEEEecCCC-CCEEEEE
Confidence 126665554 2 357889999999998765 4688886
No 197
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.15 E-value=2.8e-10 Score=70.85 Aligned_cols=70 Identities=23% Similarity=0.298 Sum_probs=48.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|+|.+.+..+.... ..|.|..+ |.+...+ . ..+..|..+.|.|.+.|
T Consensus 83 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~L~V~~~----------P~v~~~~-~-~~~~~~~~~~L~C~~~g 144 (248)
T 3pv7_A 83 SLRLPGIQLE------EAGEYRCEVVVTPLKAQGTVQLEVVAS----------PASRLLL-D-QVGMKENEDKYMCESSG 144 (248)
T ss_dssp CEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEBC----------CEEEEEC-C---------CEEEEEEEE
T ss_pred EEEeCCCCHH------HCeEEEEEEEeCCccceeEEEEEEecC----------CceEEec-C-CccccCCCcEEEEEEcc
Confidence 4999999766 999999999998765543 44555543 6655544 2 23445788889999999
Q ss_pred -cCCc-eeEEe
Q psy11568 107 -SPTP-KIEWL 115 (116)
Q Consensus 107 -~P~p-~i~W~ 115 (116)
.|.| .++|+
T Consensus 145 ~~P~pi~v~W~ 155 (248)
T 3pv7_A 145 FYPEAINITWE 155 (248)
T ss_dssp EBSSCCEEEEE
T ss_pred EECCCeEEEEE
Confidence 7999 99997
No 198
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.15 E-value=4.9e-11 Score=74.19 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=50.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc---eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV---IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~---~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...+.|.... . ... .|.+....+....+..|+.+.|.|
T Consensus 78 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~-~~~-~P~i~~~~~~~~~~~~g~~v~L~C 147 (246)
T 4dzb_B 78 TLTVTSAHPE------DSSFYICSARTSGDFGEQFFGPGTRLTVLEDL--K-NVF-PPEVAVFEPSEAEISHTQKATLVC 147 (246)
T ss_dssp EEEECSCCGG------GCEEEEEEECCSSGGGCCEECCCEEEEEESCG--G-GCB-CCEEEEECCCHHHHHHHSEEEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEecCCCCcceEEcCCEEEEEecCC--C-ccc-CCceEeecCCchhccCCCcEEEEE
Confidence 6999999766 999999999976431 11 1334443210 0 001 255544333444455699999999
Q ss_pred eecCcCCc--eeEEe
Q psy11568 103 AAQGSPTP--KIEWL 115 (116)
Q Consensus 103 ~~~g~P~p--~i~W~ 115 (116)
.+.|.|+| .++|+
T Consensus 148 ~~~g~~p~~~~v~W~ 162 (246)
T 4dzb_B 148 LATGFYPDHVELSWW 162 (246)
T ss_dssp EEEEEBSSCEEEEEE
T ss_pred EEccCcCCceEEEEE
Confidence 99997765 88996
No 199
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.15 E-value=3.3e-11 Score=77.80 Aligned_cols=96 Identities=10% Similarity=0.225 Sum_probs=57.7
Q ss_pred EEEEEccCCeeeeccccceEEe--eCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--EEEEEEEEeCcEe
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIAL--SNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--LSRFVHVKAGSVV 72 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~--~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~~~~~~v~~~~~~ 72 (116)
.|+| +++|+++..... .... .++ .|.|.....+ |+|.|+|.+.|..+.. ......+..
T Consensus 150 ~v~W-~k~g~~l~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~d------~~g~Y~C~a~n~~~~~~~~~~~~~~~~---- 217 (327)
T 2wng_A 150 TLKW-FKNGNELSDFQT-NVDPVGESVSYSIHSTAKVVLTRED------VHSQVICEVAHVTLQGDPLRGTANLSE---- 217 (327)
T ss_dssp EEEE-EETTEECCCEEE-EEECSSCCSCEEEEEEEEEECCTTG------GGCEEEEEEECTTSCSCCEEEEEEGGG----
T ss_pred EEEE-EECCEEcccccc-ccccccCCCceEEEEEEEEechhcC------cCceEEEEEeccccCCCcccceEEecc----
Confidence 8999 899998864221 1111 111 3555555333 7899999999997653 122111110
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCc--eeEEe
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP--KIEWL 115 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~ 115 (116)
. ...+ |.+...+ .. +.+|+.+.|.|.+.|.|+| .++|+
T Consensus 218 ~-v~~~-P~i~~~~-~~--~~~G~~v~l~C~~~g~~p~~~~v~W~ 257 (327)
T 2wng_A 218 T-IRVP-PTLEVTQ-QP--VRAENQVNVTCQVRKFYPQRLQLTWL 257 (327)
T ss_dssp T-BCBC-CEEEEEE-EC--CSSTTCCEEEEEEEEEBSSCEEEEEE
T ss_pred c-cCCC-CEEEEec-CC--cCCCCcEEEEEEEccccCCCcEEEEE
Confidence 0 0112 5555443 22 6789999999999996544 79997
No 200
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.15 E-value=1.1e-09 Score=68.45 Aligned_cols=81 Identities=16% Similarity=0.199 Sum_probs=50.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE----EEEEEEeCcEeee----------eccCCCceEecCCCeEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS----RFVHVKAGSVVSL----------LDIQGPLFRIEPPYRFEFS 93 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~----~~~~v~~~~~~~~----------~~~~~p~~~~~~~~~~~~~ 93 (116)
.|.|.++..+ |+|.|.|.+.+..+.... ..|.|........ .....+..+..+ ....+.
T Consensus 75 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~ 147 (256)
T 3ux9_B 75 SLAITGLQSE------DEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVES-GGGLVQ 147 (256)
T ss_dssp EEEECSCCGG------GCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEE-CCEEEC
T ss_pred EEEECCCChh------hCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcC-CCeEEc
Confidence 6999999766 999999999997543221 3444443200000 000001122232 345588
Q ss_pred CCCcEEEEeeecCcC--CceeEEe
Q psy11568 94 NESGGRLDCAAQGSP--TPKIEWL 115 (116)
Q Consensus 94 ~g~~~~l~C~~~g~P--~p~i~W~ 115 (116)
+|+++.|.|.+.+.| .+.+.|+
T Consensus 148 ~G~~v~L~C~~~~~~~~~~~v~W~ 171 (256)
T 3ux9_B 148 PGGSLRLSCAASGFTFSSYAMSWV 171 (256)
T ss_dssp TTCCEEEEEEEESSCGGGSEEEEE
T ss_pred CCCeEEEEEEEeCCcccccEEEEE
Confidence 999999999999877 7899996
No 201
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.15 E-value=3.2e-10 Score=62.96 Aligned_cols=61 Identities=15% Similarity=0.180 Sum_probs=44.1
Q ss_pred CcEEEEEccCCeeeeccccceEEee--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALS--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|.| +++|..+....+...... ...|.|.++..+ |+|.|+|.|.|..|...+ ..|.|..
T Consensus 36 ~p~i~W-~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~~ 99 (114)
T 2cqv_A 36 PITCTW-MKFRKQIQESEHMKVENSENGSKLTILAARQE------HCGCYTLLVENKLGSRQAQVNLTVVD 99 (114)
T ss_dssp SCEEEE-EESSSBCCCSSSEEEEECSSEEEEEETTCCTT------TCEEEEEEEECSSCEEECCEEEEEEC
T ss_pred CCEEEE-EECCEECcCCCCEEEEEcCCEEEEEECCCChh------cCEEEEEEEEECCCcEEEEEEEEEEC
Confidence 378999 889888864333322222 237999999766 999999999999997664 5565553
No 202
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.14 E-value=2.1e-10 Score=70.35 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=50.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-----ce-EEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-----VI-LSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-----~~-~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.+..+ .. ....|.|... ... .|.+...++. ..+..|+.+.|.
T Consensus 82 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~~~-~~~~~g~~v~L~ 148 (222)
T 1q9r_B 82 YLQMNTLRAE------DSATYYCARDHDGYYERFSYWGQGTLVTVSAA-----KTT-PPSVYPLAPG-SAAQTNSMVTLG 148 (222)
T ss_dssp EEEECSCCGG------GCEEEEEEECCCSSCCSCCCBCCCEEEEECSS-----CCB-CCEEEEECCC-SCCCCSSEEEEE
T ss_pred EEEECcCCcc------cCeEEEEEEeccCCcccceEeCCceEEEeccC-----CCC-CCeEEEcccc-ccccCCCcEEEE
Confidence 7999999766 99999999999764 11 1234444421 001 2555443322 124579999999
Q ss_pred eeecCc-CCc-eeEEe
Q psy11568 102 CAAQGS-PTP-KIEWL 115 (116)
Q Consensus 102 C~~~g~-P~p-~i~W~ 115 (116)
|.+.|. |.| .++|+
T Consensus 149 C~~~g~~P~p~~v~W~ 164 (222)
T 1q9r_B 149 CLVKGYFPEPVTVTWN 164 (222)
T ss_dssp EEEEEEBSSCCEEEEG
T ss_pred EEEccEECCCCEEEEe
Confidence 999986 888 99996
No 203
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.14 E-value=1e-10 Score=73.01 Aligned_cols=74 Identities=18% Similarity=0.310 Sum_probs=48.9
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..+.|... .. .|.+...++.. ....|+.+.|.|.+.
T Consensus 114 ~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~~l~V~~~------~~-~P~v~~~~~~~-~~~~g~~v~l~C~~~ 179 (254)
T 2c1o_A 114 TLKISRVEAE------DLGIYYCVQGSHFPPTFGAGTKLELKRA------DA-APTVSIFPPSS-EQLTSGGASVVCFLN 179 (254)
T ss_dssp EEEESSCCGG------GCSEEEEEECSSSSCEEBCCEEEEECCC------CB-CCEEEEECCCH-HHHHTTEEEEEEEEE
T ss_pred EEEECcCCcc------cCEEEEEEEEcCcceEecCCEEEEECCC------CC-CCeeEeecCCh-hhccCCcEEEEEEEe
Confidence 7999999766 999999999998664332 23444321 01 15555443222 223578999999998
Q ss_pred CcC-C-ceeEEe
Q psy11568 106 GSP-T-PKIEWL 115 (116)
Q Consensus 106 g~P-~-p~i~W~ 115 (116)
|.+ + +.++|+
T Consensus 180 g~~p~~~~v~W~ 191 (254)
T 2c1o_A 180 NFYPKDINVKWK 191 (254)
T ss_dssp EEBSSCCEEEEE
T ss_pred cccCCCcEEEEE
Confidence 854 4 358997
No 204
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.14 E-value=1.5e-10 Score=77.25 Aligned_cols=75 Identities=21% Similarity=0.367 Sum_probs=50.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-----ce-EEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-----VI-LSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-----~~-~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|+|.|.|..+ .. ....+.|... ... .|.+...++ ...+..|+.+.|.
T Consensus 298 ~L~I~~v~~~------D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~v~~~~~-~~~~~~g~~v~L~ 364 (438)
T 1qgc_4 298 YLQMSSLRSA------DTAMYYCVRREDGGDEGFAYWGQGTVVTVSAA-----KTT-PPSVYPLAP-GSAAAAASMVTLG 364 (438)
T ss_dssp EEEECSCCGG------GCCEEEEEECCSSSCCCCCSBCCCEEEEECSS-----CCB-CCEEEEECC-CGGGCCSSEEEEE
T ss_pred EEEECCCChh------hCEEEEEEEEccCCCccceeeCCCEEEEEecC-----CCC-CCeEEEcCc-ccccccCCcEEEE
Confidence 7999999766 99999999999543 11 1233444321 001 254443332 2234579999999
Q ss_pred eeecCc-CCc-eeEEe
Q psy11568 102 CAAQGS-PTP-KIEWL 115 (116)
Q Consensus 102 C~~~g~-P~p-~i~W~ 115 (116)
|.+.|. |.| .++|+
T Consensus 365 C~~~g~~P~~~~v~W~ 380 (438)
T 1qgc_4 365 CLVKGYFPEPVTVTWN 380 (438)
T ss_dssp EEEESCBSSCCEEEEG
T ss_pred EEeccccCCCcEEEEe
Confidence 999997 888 99996
No 205
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.14 E-value=1.1e-10 Score=73.47 Aligned_cols=78 Identities=21% Similarity=0.261 Sum_probs=49.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc-eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV-IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAA 104 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~ 104 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...+.|..... ... .|.+....+....+..|+.+.|.|.+
T Consensus 101 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~---~~~-~P~v~~~~~~~~~~~~g~~v~L~C~~ 170 (268)
T 3pl6_D 101 TLKIQRTERG------DSAVYLCATSALGDTQYFGPGTRLTVLEDLK---NVF-PPEVAVFEPSEAEISHTQKATLVCLA 170 (268)
T ss_dssp EEEECSCCGG------GCEEEEEEEESSSSSCEECCCEEEEEESCGG---GCB-CCEEEEECCCHHHHHHHSEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEecCCCceeeCCcEEEEEecCcc---ccc-CCceEEeCCCcccccCCCceEEEEEE
Confidence 6999999766 999999999984211 11 13444443100 001 15444433344445568999999999
Q ss_pred cCcCCc--eeEEe
Q psy11568 105 QGSPTP--KIEWL 115 (116)
Q Consensus 105 ~g~P~p--~i~W~ 115 (116)
.|.|++ .++|+
T Consensus 171 ~g~~p~~~~v~W~ 183 (268)
T 3pl6_D 171 TGFYPDHVELSWW 183 (268)
T ss_dssp EEEBSSCEEEEEE
T ss_pred CcccCCCeEEEEE
Confidence 997655 88996
No 206
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.13 E-value=3.2e-10 Score=65.54 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=26.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|.++..+ |+|.|+|.|.|..|.... ..|.|
T Consensus 104 ~L~I~~v~~~------DsG~Y~C~A~N~~G~~~~~~~L~V 137 (139)
T 1gxe_A 104 IFTVEGAEKE------DEGVYTVTVKNPVGEDQVNLTVKV 137 (139)
T ss_dssp EEECSCCCTT------TCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEEeCCceEEEEEEEEE
Confidence 6999999766 999999999999997764 44433
No 207
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.13 E-value=3.2e-10 Score=62.09 Aligned_cols=60 Identities=27% Similarity=0.407 Sum_probs=42.5
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
|.|.| +++|..+....+......++ .|.|.++..+ |+|.|+|.+.|..|.... ..|.|..
T Consensus 43 p~i~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 43 PVVVW-EKGGQQLAASERLSFPADGAEHGLLLTAALPT------DAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp CEEEE-EETTEECCCCSSEECCEETTEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEE-EECCeECCCCCcEEEEeCCCEEEEEEccCCHH------hCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 68999 88998886433322222222 7999999766 999999999999987664 4455443
No 208
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.13 E-value=2.7e-10 Score=61.49 Aligned_cols=59 Identities=15% Similarity=0.204 Sum_probs=42.0
Q ss_pred CcEEEEEccCCeeeeccccceEEe-eC---CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIAL-SN---GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~-~~---~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.+.| +++|..+......++.. .+ ..|.|.++..+ |+|.|+|.+.|..|.... ..|.|
T Consensus 34 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V 97 (100)
T 3irg_A 34 TPEVTW-SCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQ------DGGLYTLSLGNEFGSDSATVNIHI 97 (100)
T ss_dssp CCEEEE-EETTEECCTTGGGTEEEEECSSEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCceEE-EECCEEeecCCCCEEEEEecCCEEEEEEeecCcc------cCEEEEEEEEeCCCcEEEEEEEEE
Confidence 378999 88998886432333322 22 47999999766 999999999999987653 44444
No 209
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.12 E-value=1.2e-10 Score=70.82 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=48.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--EE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--LS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.|..+.. .. ..+.|.... .. .|.+...+ ....+..|+.+.|.|.
T Consensus 70 ~L~I~~v~~~------D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~-----~~-~p~v~~~~-~~~~~~~g~~v~L~C~ 136 (212)
T 1nfd_E 70 TLTISGAQPE------DEAAYYCLSSYGDNNDLVFGSGTQLTVLRGP-----KS-SPKVTVFP-PSPEELRTNKATLVCL 136 (212)
T ss_dssp EEEETTCCGG------GCSEEEEEEEETTTTEEEECCCEEEEEECCC-----CB-CCEEECCC-CCHHHHHTTEECCCEE
T ss_pred EEEECcCCcc------cCEEEEEEEEcccCcccccCCceEEEEccCC-----CC-CCEEEeeC-CchHhccCCceEEEEE
Confidence 7999999766 9999999999732211 11 334443210 01 15554433 2223356899999999
Q ss_pred ecCc-CC-ceeEEe
Q psy11568 104 AQGS-PT-PKIEWL 115 (116)
Q Consensus 104 ~~g~-P~-p~i~W~ 115 (116)
+.|. |+ |.++|+
T Consensus 137 ~~g~~p~~~~v~W~ 150 (212)
T 1nfd_E 137 VNDFYPGSATVTWK 150 (212)
T ss_dssp EEEEBSSCCEEEEE
T ss_pred EEeeECCccEEEEE
Confidence 9987 54 799997
No 210
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.12 E-value=5.6e-10 Score=68.93 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=48.9
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCC------c--eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCC
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAG------V--IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNES 96 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g------~--~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~ 96 (116)
..|.|.++..+ |+|.|.|.+.+..| . .. ...|.|... ... .|.+...++ ...+..|+
T Consensus 80 ~~L~I~~v~~~------D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~i~~~~~-~~~~~~g~ 146 (228)
T 3bae_H 80 VFMKITSVDTA------DTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSA-----KTT-APSVYPLAP-VCGDTTGS 146 (228)
T ss_dssp EEEEECSCCGG------GCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSC-----CCB-CCEEEEECC------CCS
T ss_pred EEEEEcCCCcc------cCEEEEEEEecCCCccccccceeeeCCcEEEEecCC-----CCC-CCEEEEecc-cccccCCC
Confidence 37999999766 99999999998764 1 11 133444321 001 255544332 23356799
Q ss_pred cEEEEeeecCc-CCc-eeEEe
Q psy11568 97 GGRLDCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 97 ~~~l~C~~~g~-P~p-~i~W~ 115 (116)
.+.|.|.+.|. |.| .++|+
T Consensus 147 ~~~l~C~~~g~~P~p~~v~W~ 167 (228)
T 3bae_H 147 SVTLGCLVKGYFPEPVTLTWN 167 (228)
T ss_dssp EEEEEEEEEEEBSSCCEEEEG
T ss_pred CEEEEEEEccEeCCCEEEEEe
Confidence 99999999986 888 99996
No 211
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.12 E-value=3.6e-11 Score=64.76 Aligned_cols=49 Identities=14% Similarity=0.293 Sum_probs=38.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|.|+| ++||+++......+....++ .|.|.++..+ |+|.|+|.|.|..
T Consensus 34 ~~~v~W-~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~ 84 (91)
T 2lvc_A 34 DAPVRW-YKDGQEVEESDFVVLENEGPHRRLVLPATQPS------DGGEFQCVAGDEC 84 (91)
T ss_dssp TSCCEE-EETTSCCCCCSSCEEEEETTEEEEEESSCCGG------GCSEEEEECSSCE
T ss_pred CcEEEE-EECCEEeeeeeeeeEEecCCeEEEEeCCCChh------hcEEEEEEEcceE
Confidence 367999 99999997655545544444 6999999766 9999999998863
No 212
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.12 E-value=2.8e-10 Score=61.38 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=37.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
|.|+| ++||+++....+.+....++ .|.|.++..+ |+|.|+|.|.|..
T Consensus 34 ~~v~W-~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~------D~G~Y~C~a~n~~ 83 (93)
T 1waa_A 34 VHGQW-KLKGQPLAASPDCEIIEDGKKHILILHNCQLG------MTGEVSFQAANTK 83 (93)
T ss_dssp CCCEE-EETTEECCCBTTEEEEEETTEEEEEECSCCGG------GCEEEEEEETTEE
T ss_pred CeEEE-EECCEECcCCCCEEEEEECCEEEEEECCCChh------hCEEEEEEECCCc
Confidence 67899 99999987544444444443 7999999766 9999999999853
No 213
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.12 E-value=2.9e-10 Score=70.63 Aligned_cols=78 Identities=23% Similarity=0.311 Sum_probs=48.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC---CceE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA---GVIL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~---g~~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
.|.|.++..+ |+|.|.|.+.+.. .... ...+.|..... ... .|.+....+....+..|+.+.|.|
T Consensus 77 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~-~p~~~~~~~~~~~~~~g~~v~l~C 146 (245)
T 4ei6_B 77 TLKIQPTALE------DSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK---NVF-PPEVAVFEPSEAEISHTQKATLVC 146 (245)
T ss_dssp EEEECSCCGG------GCEEEEEEEECSSTTCCCEECCCEEEEEESCGG---GCB-CCEEEEECCCHHHHHHHSEEEEEE
T ss_pred EEEECCCCHh------HCEEEEEEEccCCCcceEEEcCCcEEEEecccC---CCC-CceEEEeCCCcccccCCCceEEEE
Confidence 7999999766 9999999999632 1111 13344442100 001 154443332444455689999999
Q ss_pred eecCc-CCc-eeEEe
Q psy11568 103 AAQGS-PTP-KIEWL 115 (116)
Q Consensus 103 ~~~g~-P~p-~i~W~ 115 (116)
.+.|. |.| .++|+
T Consensus 147 ~~~g~~p~~~~v~W~ 161 (245)
T 4ei6_B 147 LATGFYPDHVELSWW 161 (245)
T ss_dssp EEEEEBSSCEEEEEE
T ss_pred EEeeEeCCCeEEEEE
Confidence 99984 545 78996
No 214
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.11 E-value=4.4e-10 Score=60.85 Aligned_cols=54 Identities=19% Similarity=0.340 Sum_probs=40.4
Q ss_pred CcEEEEEccCCeeeecccc---ceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKD---LRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~---~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.+.| +++|..+..... ......++.|.|.++..+ |+|.|+|.+.|..|....
T Consensus 37 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~~~ 93 (100)
T 3caf_A 37 MPTMRW-LKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPS------DKGNYTCVVENEYGSINH 93 (100)
T ss_dssp CCEEEE-EETTEECCGGGSTTCCEEEGGGTEEEECSCCGG------GCEEEEEEEEETTEEEEE
T ss_pred CCEEEE-EECCEEcccccccccEEEecCeEEEEEccCCcC------CCEEEEEEEEeCCCEEEE
Confidence 378999 899988865322 122233458999999766 999999999999987653
No 215
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.11 E-value=1.8e-10 Score=72.78 Aligned_cols=97 Identities=14% Similarity=0.161 Sum_probs=60.6
Q ss_pred cEEEEEccCCeeeeccccc-e--EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC----ceEE--EEEEEEeCcEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-R--IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG----VILS--RFVHVKAGSVV 72 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~--~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g----~~~~--~~~~v~~~~~~ 72 (116)
+.+.| +|+|..+...... + ....++.|.|.++..+ |+|.|+|.+.+..+ ...+ ..|.|...
T Consensus 35 ~~~~W-~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~--- 104 (257)
T 1b6u_A 35 QHFLL-HREGKFKDTLHLIGEHHDGVSKANFSIGPMMQD------LAGTYRCYGSVTHSPYQLSAPSDPLDIVITGL--- 104 (257)
T ss_dssp SEEEE-EEESTTCEEEEEECBCCTTCEEEEEEECSCCTT------TCEEEEEEEECSSCTTSCCCCCCCEEEEEECS---
T ss_pred cEEEE-EECCCCCCcceeeeeccCCCceEEEEeecCCcc------cCEEEEEeEeccCCCccccccCCCEEEecccC---
Confidence 57899 7887655311000 0 0112347999999766 99999999986431 2222 44555432
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
...|.+...+. ..+.+|+++.|.|.+.+.| +.+.|+
T Consensus 105 ----~~~P~l~~~p~--~~V~~G~~vtL~C~~~~~~-~~~~w~ 140 (257)
T 1b6u_A 105 ----YEKPSLSAQPG--PTVLAGESVTLSCSSRSSY-DMYHLS 140 (257)
T ss_dssp ----SCCCEEECSSC--TTCBTTCEEEEEEECSSCC-SEEEEE
T ss_pred ----CCCcceEccCC--CccCCCCEEEEEEeCCCCC-cEEEEE
Confidence 01256655542 2467899999999998764 688896
No 216
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.11 E-value=3.4e-10 Score=68.70 Aligned_cols=72 Identities=19% Similarity=0.351 Sum_probs=45.9
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEE--EEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe-e
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR--FVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC-A 103 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~--~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C-~ 103 (116)
.+|.|.++..+ |+|.|.|.+.|..+..... .+.+..+ |.....+ .......+..+.+.| .
T Consensus 83 ~sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~c~~ 145 (225)
T 4fmk_A 83 ATLAFRGLRVE------DEGNYTCEFATFPNGTRRGVTWLRVIAQ----------PENHAEA-QEVTIGPQSVAVARCVS 145 (225)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEEETTEEEEEEEEEEEEBC----------CEEEEEE-CCBCCSSSCEEEEEEEE
T ss_pred EEEEEccCCHH------HCcceEEEEEeCCCcceeeeeeeeeecC----------Cceeecc-cceeecceeeeeeeeee
Confidence 46999999766 9999999999987765542 2222222 3333332 222334456666665 4
Q ss_pred ecCcCCceeEEe
Q psy11568 104 AQGSPTPKIEWL 115 (116)
Q Consensus 104 ~~g~P~p~i~W~ 115 (116)
+.+.|+|.+.|+
T Consensus 146 ~~~~P~~~~~w~ 157 (225)
T 4fmk_A 146 TGGRPPARITWI 157 (225)
T ss_dssp EEEBSCCEEEEE
T ss_pred cCCCCCCEEEEE
Confidence 566788899986
No 217
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.10 E-value=1.9e-10 Score=71.97 Aligned_cols=74 Identities=20% Similarity=0.377 Sum_probs=49.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..+.|... .. .|.+...++.. .+..|+.+.|.|.+.
T Consensus 110 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~-~P~v~~~~~~~-~~~~g~~v~L~C~~~ 175 (252)
T 3bkj_L 110 TLRISRVEAE------DLGVYYCFQASLVPLTFGAGTKLELKRA------DA-APTVSIFPPSS-EQLTSGGASVVCFLN 175 (252)
T ss_dssp EEEESSCCGG------GCEEEEEEECSBSSCEECCCEEEEECCC------CB-CCEEEEECCCH-HHHHHTEEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEEcCCccEECCCEEEEEeCC------Cc-CcEEEEeCCCh-hhcCCCcEEEEEEEe
Confidence 7999999766 999999999998654332 33444321 01 25555443222 234688999999999
Q ss_pred Cc-CCc-eeEEe
Q psy11568 106 GS-PTP-KIEWL 115 (116)
Q Consensus 106 g~-P~p-~i~W~ 115 (116)
|. |.| .++|+
T Consensus 176 g~~p~~~~v~W~ 187 (252)
T 3bkj_L 176 NFYPKDINVKWK 187 (252)
T ss_dssp EEBSSCCEEEEE
T ss_pred eEeCCCcEEEEE
Confidence 85 544 79997
No 218
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=2.9e-10 Score=61.76 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=40.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
+|.|+| +++|..+... .+....++.|.|.++..+ |+|.|+|.|.|..|....
T Consensus 31 pp~i~W-~k~g~~~~~~--~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~ 82 (99)
T 2cr3_A 31 VQSINW-LRDGVQLAES--NRTRITGEEVEVQDSVPA------DSGLYACVTSSPSGSDTT 82 (99)
T ss_dssp CCEEEE-EESSSBCCCC--SSEEECSSEEEETTCCTT------TCEEEEEEEEETTEEEEE
T ss_pred CCeEEE-EECCEECCCC--CcEEEECCEEEEccCCHH------HCEEEEEEEEeCCceEEE
Confidence 378999 8898877542 244455779999999766 999999999999987653
No 219
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.09 E-value=2.4e-11 Score=77.03 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=50.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|+|.+.|..|.... ..|.|..+ + ..+...+ ....+.+|+.+.|.|.+.+
T Consensus 52 ~L~i~~~~~~------d~G~Y~C~~~n~~~~~~~~~~l~V~~~--------~-~~~~~~~-~~~~v~~g~~v~l~C~~~~ 115 (292)
T 4dkd_C 52 ILSTNNATFQ------NTGTYRCTEPGDPLGGSAAIHLYVKDP--------A-RPWNVLA-QEVVVFEDQDALLPCLLTD 115 (292)
T ss_dssp EEEESSCCGG------GCSCEEECCCC----CCEEECCEECCS--------S-CCEEESC-SEEEEETTSCEECCEEESS
T ss_pred EEEEcccccc------cCEEEEEEEccCCCCcceEEEEEEcCc--------c-ccccccC-CeEEEcCCCcEEEeeeCCC
Confidence 7999999766 999999999998766543 44444432 1 2234444 6788899999999999998
Q ss_pred cCC--ceeEEe
Q psy11568 107 SPT--PKIEWL 115 (116)
Q Consensus 107 ~P~--p~i~W~ 115 (116)
|. |.++|+
T Consensus 116 -~~~~~~v~W~ 125 (292)
T 4dkd_C 116 -PVLEAGVSLV 125 (292)
T ss_dssp -GGGGSSEEEE
T ss_pred -CCcceeEEEE
Confidence 54 789996
No 220
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.09 E-value=3.5e-10 Score=69.70 Aligned_cols=76 Identities=17% Similarity=0.317 Sum_probs=50.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-----c--eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-----V--IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-----~--~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.+..| . .. ...|.|... ... .|.+....+.. .+..|+.+
T Consensus 80 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~v~~~~~~~-~~~~g~~v 146 (225)
T 1op3_H 80 YLQMHKMRVE------DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPA-----STK-GPSVFPLAPSS-KSTSGGTA 146 (225)
T ss_dssp EEEECSCCGG------GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESC-----SCB-CCEEEEECCCT-TCCCCCEE
T ss_pred EEEECCCChh------hCEEEEEEEecCCCccccccceeecCCEEEecccC-----CCc-CCeEEEecccc-cccCCCcE
Confidence 7999999766 99999999999865 2 11 134445431 001 14443322122 24579999
Q ss_pred EEEeeecCc-CCc-eeEEeC
Q psy11568 99 RLDCAAQGS-PTP-KIEWLI 116 (116)
Q Consensus 99 ~l~C~~~g~-P~p-~i~W~~ 116 (116)
.|.|.+.|. |.| .++|+.
T Consensus 147 ~L~C~~~g~~P~p~~v~W~~ 166 (225)
T 1op3_H 147 ALGCLVKDYFPEPVTVSWNS 166 (225)
T ss_dssp EEEEEEEEEBSSCCEEECCT
T ss_pred EEEEEEEeEECCCeEEEEec
Confidence 999999987 777 999963
No 221
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.09 E-value=8e-10 Score=67.66 Aligned_cols=75 Identities=19% Similarity=0.322 Sum_probs=50.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc--e--EEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV--I--LSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~--~--~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.+..+. . ....|.|... ... .|.+...++. ..+..|+.+.|.|.
T Consensus 79 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~i~~~~~~-~~~~~g~~v~L~C~ 145 (215)
T 1c5d_H 79 FLKMNSLQTE------DTAIYFCTREDGWNYFDYWGPGTMVTVSSA-----QTT-APSVYPLAPG-CGDTTSSTVTLGCL 145 (215)
T ss_dssp EEEESSCCGG------GCEEEEEEECCSSSCSCCBCCCEEEEECSS-----CCB-CCCEEEECCC-SSCCCCSSEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEecCCcccceEcCCEEEEecCC-----CCC-CCeEEeccCC-hhhccCCcEEEEEE
Confidence 7999999766 999999999987422 1 1234444421 001 1555433312 12467999999999
Q ss_pred ecCc-CCc-eeEEe
Q psy11568 104 AQGS-PTP-KIEWL 115 (116)
Q Consensus 104 ~~g~-P~p-~i~W~ 115 (116)
+.|. |.| .++|+
T Consensus 146 ~~g~~P~p~~v~W~ 159 (215)
T 1c5d_H 146 VKGYFPEPVTVTWN 159 (215)
T ss_dssp EEEEBSSCCEEEEG
T ss_pred EeeeEcCCcEEEEc
Confidence 9987 888 99996
No 222
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.09 E-value=8.4e-11 Score=71.99 Aligned_cols=52 Identities=15% Similarity=0.351 Sum_probs=40.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+| ++||+++.... ++...+ ..|.|.++..+ |+|.|+|.|.|..|...+
T Consensus 146 ~p~i~W-~k~g~~l~~~~--~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~ 199 (207)
T 3rbs_A 146 ETHIVW-YKDEREISVDE--KHDFKDGICTLLITEFSKK------DAGIYEVILKDDRGKDKS 199 (207)
T ss_dssp TCEEEE-EETTEEECCCC--CCCCSSEEEEEEETTCCGG------GCEEEEEEEEETTEEEEE
T ss_pred CCEEEE-EECCEECCCCC--ceEcCCCEEEEEECCCCcc------cCEEEEEEEEcCCCEEEE
Confidence 388999 99999986422 222222 26999999766 999999999999998775
No 223
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.08 E-value=8.2e-10 Score=61.70 Aligned_cols=61 Identities=26% Similarity=0.435 Sum_probs=43.5
Q ss_pred CcEEEEEccCCeeeecc-ccceEEeeC-C--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYV-KDLRIALSN-G--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~-~~~~~~~~~-~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|.| +++|..+... .+......+ + .|.|.++..+ |+|.|+|.|.|..|.... ..|.|..
T Consensus 44 ~p~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 44 PPKLFW-KRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKK------DAGWYTVSAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp CCEEEE-EETTEECCCCBTTEEEEECTTCEEEEEEEEECGG------GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEE-EECCEECcCCCCeEEEEeCCCCeEEEEECCCCcc------cCEEEEEEEEcCCCeEEEEEEEEEeC
Confidence 378999 8899887642 222222222 2 7999999766 999999999999987764 5555554
No 224
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.07 E-value=6.3e-10 Score=69.10 Aligned_cols=78 Identities=22% Similarity=0.393 Sum_probs=50.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC---c-eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG---V-IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g---~-~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.+..+ . .. ...|.|..... ...+ |.+....+....+..|+.+.|.
T Consensus 73 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~---~~~~-P~v~~~~~~~~~~~~g~~~~L~ 142 (238)
T 1bec_A 73 SLILELATPS------QTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLR---QVTP-PKVSLFEPSKAEIANKQKATLV 142 (238)
T ss_dssp EEEESSCCGG------GCEEEEEEEESCTTCGGGCEECCCEEEEEESCGG---GCBC-CEEEEECCCSTTCSSSCSCSEE
T ss_pred EEEEecCCcc------cCEEEEEEEecCCCCccccccCCCEEEEEeccCC---CCCC-CceEEECCChHHcccCCceEEE
Confidence 7999999766 99999999999742 1 11 13455543100 0012 5554433233344579999999
Q ss_pred eeecCc-CCc-eeEEe
Q psy11568 102 CAAQGS-PTP-KIEWL 115 (116)
Q Consensus 102 C~~~g~-P~p-~i~W~ 115 (116)
|.+.|. |.| .++|+
T Consensus 143 C~~~g~~P~~~~v~W~ 158 (238)
T 1bec_A 143 CLARGFFPDHVELSWW 158 (238)
T ss_dssp EEEEEEBSCCEEEEEE
T ss_pred EEEeeEeCCCcEEEEE
Confidence 999986 655 89996
No 225
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.07 E-value=9.8e-11 Score=78.85 Aligned_cols=105 Identities=13% Similarity=0.176 Sum_probs=59.6
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCc-Eee
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGS-VVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~-~~~ 73 (116)
|.|+| +++|..+......+....++ .|.|.++..+ | |.|+|.+.|..+.... ..+.+.... .+.
T Consensus 164 ~~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~ 235 (457)
T 1hzh_H 164 VTVSW-NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSNTKVDKKAEPKSCDKTHT 235 (457)
T ss_dssp CEEEE-TTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGG------T-SCCEEEEEEGGGTEEEEEECCCCCSCSSCS
T ss_pred eEEEE-EeCCEeccceEcCceECCCCCEEEEEEEEecccccC------C-ceEEEEEEeCCCCcceeEEecccCCCcccc
Confidence 68999 99986543111111111222 5888888655 8 9999999998765432 222221100 000
Q ss_pred --e-----eccCCCceEecCCCeEE-EeCCCcEEEEeeecCcCCc----eeEEe
Q psy11568 74 --L-----LDIQGPLFRIEPPYRFE-FSNESGGRLDCAAQGSPTP----KIEWL 115 (116)
Q Consensus 74 --~-----~~~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~g~P~p----~i~W~ 115 (116)
+ ...+ |.+...++.... +.+|+.+.|.|.+.|.|++ .++|+
T Consensus 236 ~~~~~~~~~~~~-p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~ 288 (457)
T 1hzh_H 236 CPPCPAPELLGG-PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWY 288 (457)
T ss_dssp CCSCCCCCCSSS-CEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEE
T ss_pred cCCCCCccccCC-ceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEE
Confidence 0 0011 443222222222 5679999999999998653 89996
No 226
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.07 E-value=1.2e-09 Score=63.77 Aligned_cols=62 Identities=19% Similarity=0.355 Sum_probs=45.3
Q ss_pred CcEEEEEccCCeeeeccccceEEee-CC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALS-NG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAG 69 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~-~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~ 69 (116)
.|.|.| +++|..+........... ++ .|.|.++... |+|.|+|.|.|..|.... ..|.|..+
T Consensus 70 ~p~v~W-~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 70 DPEVMW-FKDDNPVKESRHFQIDYDEEGNCSLTISEVCGD------DDAKYTCKAVNSLGEATCTAELLVETM 135 (154)
T ss_dssp CCEEEE-EETTEECCCSSSEEEEECTTCEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCEEEE-EECCEECCCCCcEEEEECCCCeEEEEECCCChh------cCEEEEEEEEECCCeEEEEEEEEEeCc
Confidence 378999 899998865333333222 22 7999999766 999999999999998764 55666653
No 227
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.06 E-value=1.4e-10 Score=74.90 Aligned_cols=101 Identities=12% Similarity=0.201 Sum_probs=60.3
Q ss_pred cEEEEEccCCeeeeccccc-eEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeee
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSL 74 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~ 74 (116)
|.|+| ++||.++...... .....++ .|.|.....+ |+|.|+|.+.|..+.... .+.+.. ..
T Consensus 41 ~~v~W-~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~------d~g~Y~C~a~n~~~~~~~-~~~~~~----~~ 108 (323)
T 2wqr_A 41 IQITW-LEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWL------SDRTYTCQVTYQGHTFED-STKKCA----DS 108 (323)
T ss_dssp EEEEE-EETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHH------TTCCEEEEEEETTEEEEE-EECCCC----CS
T ss_pred eEEEE-EECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcC------CCCcEEEEEEeCCCCcce-eeecCC----CC
Confidence 58999 8999988642111 1111233 3555555333 899999999998754331 111100 00
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCc-CCc---eeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PTP---KIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~p---~i~W~ 115 (116)
.... |.+...++....+..|+++.|.|.+.|. |.| .++|+
T Consensus 109 ~~~~-p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~ 152 (323)
T 2wqr_A 109 NPRG-VSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWS 152 (323)
T ss_dssp SGGG-CEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEE
T ss_pred CCCC-CEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEE
Confidence 0111 4343333344556789999999999886 566 89996
No 228
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.06 E-value=2.3e-10 Score=73.94 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=56.0
Q ss_pred EEEEEccCCeeeeccccceE------EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce-EEEEEEEEeCcEeeee
Q psy11568 3 VLLWLIRDNTVIAYVKDLRI------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKAGSVVSLL 75 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~------~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~~~~~~v~~~~~~~~~ 75 (116)
.|+|++.+|..+........ ....+.|.|.++..+ |+|.|+|.+.|..+.. ....+.+... .
T Consensus 148 ~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~~~~~~~~~~v~~~~~-----~ 216 (323)
T 2wqr_A 148 QLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWI------EGETYQCRVTHPHLPRALMRSTTKTSG-----P 216 (323)
T ss_dssp EEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHH------TTCCEEEEEECTTSSSCEEEEECCCCS-----C
T ss_pred EEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHcc------CCCCEEEEEECCCCCCCeeeEEEccCC-----C
Confidence 89994445565532111100 012236999998666 9999999999986432 2222211100 0
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCc-CCc-eeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~p-~i~W~ 115 (116)
.. .|.+...++.. ....|+.+.|.|.+.|. |.+ .++|+
T Consensus 217 ~~-~P~v~~~~~~~-~~~~g~~~~l~C~~~g~~p~~~~v~W~ 256 (323)
T 2wqr_A 217 RA-APEVYAFATPE-WPGSRDKRTLACLIQNFMPEDISVQWL 256 (323)
T ss_dssp CB-CCEEEEEECCC-CTTCTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred CC-CCEEEEeCCCh-HHhcCCcEEEEEEeeeeeCCCcEEEEE
Confidence 01 15544332111 11239999999999984 443 79997
No 229
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.06 E-value=1.3e-09 Score=67.51 Aligned_cols=78 Identities=19% Similarity=0.304 Sum_probs=48.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC--CceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA--GVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~--g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.+.. ..... ..+.|.... . ... .|.+...++....+..|+.+.|.|.
T Consensus 76 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--~-~~~-~p~~~~~~~~~~~~~~g~~v~L~C~ 145 (240)
T 3q5y_A 76 EMNMSALELE------DSAMYFCASSLRWGDEQYFGPGTRLTVLEDL--R-NVT-PPKVSLFEPSKAEIANKQKATLVCL 145 (240)
T ss_dssp EEEECSCCGG------GCEEEEEEEESSTTBCCEECCCEEEEEESCG--G-GCB-CCEEEEECCCHHHHHHHSEEEEEEE
T ss_pred EEEECcCChh------HCEEEEEEEccCCCcceEEcCCEEEEEeccc--c-CCC-CCeeEEeCCchhhcccCCceEEEEE
Confidence 6999999766 9999999998432 11111 334443210 0 001 2555443334444556899999999
Q ss_pred ecC-cCCc-eeEEe
Q psy11568 104 AQG-SPTP-KIEWL 115 (116)
Q Consensus 104 ~~g-~P~p-~i~W~ 115 (116)
+.| .|.| .++|+
T Consensus 146 ~~g~~P~~~~v~W~ 159 (240)
T 3q5y_A 146 ARGFFPDHVELSWW 159 (240)
T ss_dssp EEEEBSSCEEEEEE
T ss_pred EeeEECCCeEEEEE
Confidence 998 5666 78896
No 230
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=4.2e-10 Score=61.98 Aligned_cols=61 Identities=26% Similarity=0.350 Sum_probs=43.9
Q ss_pred CcEEEEEccCCeeeeccccceEEe-eCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIAL-SNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~-~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|.| +++|..+.......... .++ .|.|.++..+ |+|.|+|.|.|..|.... ..|.|..
T Consensus 38 ~p~v~W-~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~ 102 (110)
T 2dm3_A 38 TPDLSW-QLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSR------DAGIYTCIATNRAGQNSFSLELVVAA 102 (110)
T ss_dssp CCEEEC-BBSSSBCCCCSSEEEEECTTSCEEEEESSCCGG------GCSBBCEEEECSSCEEEECCEEEEEC
T ss_pred CCEEEE-EECCEECCCCCceEEEEecCCeEEEEEeeCCcc------cCEEEEEEEECCCCEEEEEEEEEEeC
Confidence 378999 88988876433333222 233 7999999766 999999999999987654 5555554
No 231
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.04 E-value=1.2e-09 Score=70.07 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=48.6
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec-
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ- 105 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~- 105 (116)
.+|.|.++..+ |+|.|+|.+.+..+...+..+.+.. .. .|.....+ ....+..+..+.+.|.+.
T Consensus 79 ~sL~I~~v~~~------D~G~Y~C~v~~~~~~~~~~~~~l~v------~~--~P~~~~~~-~~~~~~~~~~~~~~C~~~~ 143 (313)
T 4fqp_A 79 ASLRMFGLRVE------DEGNYTCLFVTFPQGSRSVDIWLRV------LA--KPQNTAEV-QKVQLTGEPVPMARCVSTG 143 (313)
T ss_dssp CCEEECSCCGG------GCEEEEEEEECSSSCEEEEEEEECC------BB--CCEEEEEE-CCBCCCSSCEEEEEEEEEE
T ss_pred eEEEECcCChh------hCEEEEEEEeeccCcceeeeeeeee------cc--CCcceecc-cceEeecCceEEEEEEccC
Confidence 46999999766 9999999886553333332222221 11 15554443 344556688888899764
Q ss_pred CcCCceeEEe
Q psy11568 106 GSPTPKIEWL 115 (116)
Q Consensus 106 g~P~p~i~W~ 115 (116)
+.|.|.++|+
T Consensus 144 ~~P~~~i~W~ 153 (313)
T 4fqp_A 144 GRPPAQITWH 153 (313)
T ss_dssp EBSCCEEEEE
T ss_pred ccCCcEEEee
Confidence 7899999997
No 232
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.04 E-value=1.1e-09 Score=66.94 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=46.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc---eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV---IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~---~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...+.|... ... .|.+...++. ..+..|+.+.|.|
T Consensus 76 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~~~-~~~~~g~~v~l~C 142 (215)
T 3nl4_H 76 DLKITSPTTE------DTATYFCVRKYGSEWGGDLWGPGTLVTVSSG-----QPK-APSVFPLAPC-CGDTPSSTVTLGC 142 (215)
T ss_dssp EEEESSCCGG------GCEEEEEEEECSSSSCEEEECCCEEEEECSS-----CCB-CCEEEEECCC-TTCCC--CEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEEecCCCccceEEcCCEEEEEeCC-----CcC-CCEEEEecCC-ccccCCCcEEEEE
Confidence 5999999766 999999999998652 11 133444311 001 2555433322 2345799999999
Q ss_pred eecCcCCc--eeEEe
Q psy11568 103 AAQGSPTP--KIEWL 115 (116)
Q Consensus 103 ~~~g~P~p--~i~W~ 115 (116)
.+.|.|++ .++|+
T Consensus 143 ~~~~~~p~~~~v~W~ 157 (215)
T 3nl4_H 143 LVKGYLPEPVTVTWN 157 (215)
T ss_dssp EEEEEBSSCCEEEEG
T ss_pred EEeeeeCCCeEEEEe
Confidence 99997544 46696
No 233
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.03 E-value=1.2e-09 Score=67.16 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=50.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.+..+.. . ...|.|.... .. .|.+...+ ...+..|+.+.|.|.
T Consensus 80 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~-----~~-~P~v~~~~--~~~~~~g~~v~L~C~ 145 (220)
T 2fbj_H 80 YLQMSKVRSE------DTALYYCARLHYYGYNAYWGQGTLVTVSAES-----AR-NPTIYPLT--LPPALSSDPVIIGCL 145 (220)
T ss_dssp EEEECSCCGG------GCEEEEEEEEETTTEEEEECCCEEEEECSSC-----CB-CCEEEEEC--CCSSSCCSSEEEEEE
T ss_pred EEEECCCChh------hCEEEEEEEeccccccceecCCEEEEecCCC-----CC-CCEEEEee--cccccCCCcEEEEEE
Confidence 7999999766 9999999999976531 1 1344444210 01 14444333 122467999999999
Q ss_pred ecCc-CC--ceeEEeC
Q psy11568 104 AQGS-PT--PKIEWLI 116 (116)
Q Consensus 104 ~~g~-P~--p~i~W~~ 116 (116)
+.+. |. |.++|+.
T Consensus 146 ~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 146 IHDYFPSGTMNVTWGK 161 (220)
T ss_dssp EEEEBSCCCEEEEESC
T ss_pred EEeEECCCcEEEEEec
Confidence 9987 76 7999973
No 234
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.02 E-value=1.1e-10 Score=71.94 Aligned_cols=74 Identities=18% Similarity=0.314 Sum_probs=42.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.|..+...+ ..+.|... .. .|.+...++.. .+..|+.+.|.|.+.
T Consensus 94 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~l~V~~~------~~-~p~v~~~~~~~-~~~~g~~v~L~C~~~ 159 (233)
T 3bqu_C 94 VFTIENMLSE------DVADYYCLQSDNLPYTFGGGTNLEIKRA------DA-APTVSIFPPSS-EQLTSGGASVVCFLN 159 (233)
T ss_dssp EEC-----CC------CCSEEEEEECSSSSCCBCCCCBC---CC------CB-CCEEEEECCCH-HHHHTTEEEEEEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEecCCceeecCCEEEEEeCC------CC-CCEEEEeCCCH-HhhcCCceEEEEEEc
Confidence 6999999766 999999999988654332 22333321 01 15555433222 224689999999999
Q ss_pred CcC-Cc-eeEEe
Q psy11568 106 GSP-TP-KIEWL 115 (116)
Q Consensus 106 g~P-~p-~i~W~ 115 (116)
|.+ .| .++|+
T Consensus 160 g~~p~~~~v~W~ 171 (233)
T 3bqu_C 160 NFYPKDINVKWK 171 (233)
T ss_dssp EEBSSCEEEEEE
T ss_pred cccCCceEEEEE
Confidence 864 43 69996
No 235
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.02 E-value=4.2e-10 Score=68.53 Aligned_cols=102 Identities=21% Similarity=0.283 Sum_probs=56.3
Q ss_pred EEEEEccCCeeeeccc-cceEEeeCCeEEecC---CCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeecc
Q psy11568 3 VLLWLIRDNTVIAYVK-DLRIALSNGSLMFPP---FPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDI 77 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~-~~~~~~~~~~l~i~~---v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~ 77 (116)
.|+| +++|.++.... .......++.+.+.. +... ...|+|.|+|.+.|..+... ...+.+.. ....
T Consensus 38 ~v~W-~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~---d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~-----~~~~ 108 (207)
T 1l6x_A 38 KFNW-YVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQ---DWLNGKEYKCKVSNKALPAPIEKTISKAK-----GQPR 108 (207)
T ss_dssp EEEE-EETTEEECCCEECCCEECTTSCEEEEEEEECCHH---HHHTTCCEEEEEECTTSSSCEEEEECCCC-----SCCB
T ss_pred EEEE-EECCccccCcccCCceeccCCcEEEEEEEEEEHH---HccCCceEEEEEEcCcCCcceEEEeccCC-----CCCc
Confidence 8999 88988775321 112233445554432 3222 01249999999999977542 22221100 0011
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCc-CC-ceeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~ 115 (116)
+ |.+...++.... ..|..+.|.|.+.|. |. +.++|+
T Consensus 109 ~-P~v~~~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~ 146 (207)
T 1l6x_A 109 E-PQVYTLPPSRDE-LTKNQVSLTCLVKGFYPSDIAVEWE 146 (207)
T ss_dssp C-CEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred C-CEEEEECCChHH-hcCCcEEEEEEEeCeECCCeEEEEE
Confidence 2 554443322211 346679999999995 54 389996
No 236
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.02 E-value=4.4e-09 Score=64.14 Aligned_cols=60 Identities=20% Similarity=0.240 Sum_probs=43.1
Q ss_pred CcEEEEEccCCeeeeccccceEE--ee--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIA--LS--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~--~~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.|+| +++|..+......++. .. .+.|.|.++..+ |+|.|.|.|.|..|.... ..+.+.
T Consensus 47 ~p~i~W-~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~v~ 111 (215)
T 3mtr_A 47 SATISW-FRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSEN------DFGNYNCTAVNRIGQESLEFILVQA 111 (215)
T ss_dssp CCEEEE-EETTEESSCSSSCSEEEEEETTEEEEEECCCSGG------GCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCEEEE-EECCeECCCCCCccEEEecCCCeeEEEEecCChh------hCeEEEEEEEECCCceEEEEEEEEC
Confidence 378999 8999988653222222 22 347999999766 999999999999997764 444443
No 237
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.01 E-value=1.9e-09 Score=66.31 Aligned_cols=75 Identities=19% Similarity=0.253 Sum_probs=49.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC---ce--E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG---VI--L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g---~~--~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
.|.|.++..+ |+|.|.|.+.+..| .. . ...|.|... ... .|.+...++.. .+..|+.+.|
T Consensus 80 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~i~~~~~~~-~~~~g~~v~L 146 (223)
T 1dee_B 80 YLQMNSLRAE------DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSG-----SAS-APTLFPLVSCE-NSNPSSTVAV 146 (223)
T ss_dssp EEEECSCCGG------GCEEEEEEEESSSSTTCCEEEECCCEEEEECSS-----CCB-CCEEEEEECTT-CCCSSSEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEeccccCcccceeecCcEEEEEccC-----CCC-CCEEEEecCCc-ccCCCCcEEE
Confidence 7999999766 99999999998753 11 1 124444321 001 14443322111 2467999999
Q ss_pred EeeecCc-CCc-eeEEe
Q psy11568 101 DCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 101 ~C~~~g~-P~p-~i~W~ 115 (116)
.|.+.|. |.| .++|+
T Consensus 147 ~C~~~g~~P~p~~v~W~ 163 (223)
T 1dee_B 147 GCLAQDFLPDSITFSWK 163 (223)
T ss_dssp EEEEEEEBSSCCEEEEE
T ss_pred EEEEEEEeCCCeEEEeE
Confidence 9999987 777 99997
No 238
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.01 E-value=1.2e-09 Score=67.87 Aligned_cols=78 Identities=22% Similarity=0.331 Sum_probs=47.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-----ceE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-----VIL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-----~~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
.|.|.++..+ |+|.|.|.+.+..| ... ...|.|.... . ... .|.+...++....+..|+.+.|
T Consensus 75 sL~I~~v~~~------D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~--~-~~~-~P~v~~~~~~~~~~~~g~~~~l 144 (245)
T 3nfj_J 75 ILSSKKLLLS------DSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDL--N-KVF-PPEVAVFEPSEAEISHTQKATL 144 (245)
T ss_dssp EEEESSCCGG------GCEEEEEEEECCTTTSSCCCEECCCEEEEEESCG--G-GCB-CCEEEEEECCHHHHHHHSEEEE
T ss_pred EEEECCCChh------hCEEEEEEEeeccCCCceeEEECCCeEEEEEccc--C-CCC-CCceEeecCCcccccCCCceEE
Confidence 6999999766 99999999999332 121 1334444310 0 001 1544433323333445899999
Q ss_pred EeeecCc-CCc-eeEEe
Q psy11568 101 DCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 101 ~C~~~g~-P~p-~i~W~ 115 (116)
.|.+.|. |++ .++|+
T Consensus 145 ~C~~~g~~p~~~~v~W~ 161 (245)
T 3nfj_J 145 VCLATGFFPDHVELSWW 161 (245)
T ss_dssp EEEEEEEBSSCEEEEEE
T ss_pred EEEEccCcCCCEEEEEE
Confidence 9999995 444 67896
No 239
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=1.5e-09 Score=60.07 Aligned_cols=58 Identities=21% Similarity=0.294 Sum_probs=40.5
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAG 69 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~ 69 (116)
|.+.| +++|+.+....+......+ ..|.|.++..+ |+|.|+|.+.|. .....|.|..+
T Consensus 42 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~---~~~~~l~V~~~ 101 (113)
T 2cpc_A 42 AEVRW-TKDGEEVVESPALLLQKEDTVRRLVLPAVQLE------DSGEYLCEIDDE---SASFTVTVTEP 101 (113)
T ss_dssp CCCEE-EETTEECCCBTTBEEEECSSEEEEEESSCCTT------TCEEEEEESSSC---EEEEEEEEECC
T ss_pred CeEEE-EECCEECccCCCEEEEECCCEEEEEECCCCcc------cCEEEEEEEecC---cEEEEEEEecC
Confidence 67899 8999988654443333333 37999999766 999999999992 22355555543
No 240
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.00 E-value=9.8e-10 Score=69.31 Aligned_cols=78 Identities=22% Similarity=0.293 Sum_probs=48.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc---eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV---IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~---~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...+.|.... .. ..+ |.+...++....+..|+.+.|.|
T Consensus 102 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~--~~-~~~-P~v~~~~~~~~~~~~g~~v~L~C 171 (270)
T 3qib_D 102 SLEIQSSEAG------DSALYLCASSLNWSQDTQYFGPGTRLLVLEDL--KN-VFP-PEVAVFEPSEAEISHTQKATLVC 171 (270)
T ss_dssp EEEESSCCGG------GCEEEEEEEESCTTCCCCEECCCEEEEEESCS--TT-CBC-CEEEEEECCHHHHHHHSEEEEEE
T ss_pred EEEECCCCHh------HCeEEEEEEecCCCccceEECCcEEEEEcccc--cc-ccC-CceEEECCCccccccCCceEEEE
Confidence 7999999766 999999999974321 11 1334444310 00 011 44433322333344589999999
Q ss_pred eecC-cCCc-eeEEe
Q psy11568 103 AAQG-SPTP-KIEWL 115 (116)
Q Consensus 103 ~~~g-~P~p-~i~W~ 115 (116)
.+.| .|.| .++|+
T Consensus 172 ~~~g~~P~~~~v~W~ 186 (270)
T 3qib_D 172 LATGFYPDHVELSWW 186 (270)
T ss_dssp EEEEEBSSCEEEEEE
T ss_pred EecceeCCCeEEEEE
Confidence 9998 6767 78996
No 241
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.00 E-value=2.6e-10 Score=70.76 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=56.9
Q ss_pred EEEEEccCCeee-eccccceEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeee
Q psy11568 3 VLLWLIRDNTVI-AYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLL 75 (116)
Q Consensus 3 ~v~W~~~~g~~~-~~~~~~~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~ 75 (116)
.|+| +++|+.+ ...........++ .|.|.++..+ |+|.|+|.+.|..+... ..+.|.... ..
T Consensus 47 ~v~W-~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~------D~g~Y~C~~~~~~~~~~-~~~~v~~~~---~~ 115 (231)
T 2w59_A 47 SVTW-TREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWL------SGERFTCTVQHEELPLP-LSKSVYRNT---GP 115 (231)
T ss_dssp EEEE-ECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHH------TTCCEEEEEECTTCSSC-EEEEECCCC---SC
T ss_pred EEEE-EcCCeeccccccccceECCCCcEEEEEEEEecchhcc------CCCEEEEEEEcCCCCCc-eEEEEecCC---CC
Confidence 8999 7888877 3211111111222 5888888655 99999999999875422 222222100 00
Q ss_pred ccCCCceEecCCCeEEEeCCCcEEEEeeecCc-C-CceeEEe
Q psy11568 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-P-TPKIEWL 115 (116)
Q Consensus 76 ~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P-~p~i~W~ 115 (116)
.. .|.+...++.... ..+..+.|.|.+.|. | .+.++|+
T Consensus 116 ~~-~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~ 155 (231)
T 2w59_A 116 TT-PPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWL 155 (231)
T ss_dssp CB-CCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred Cc-CCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEE
Confidence 01 1544333212111 235679999999996 4 3689997
No 242
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.00 E-value=1.4e-09 Score=58.67 Aligned_cols=55 Identities=25% Similarity=0.329 Sum_probs=38.3
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
|.+.| ++++..... . +....++.|.|.++..+ |+|.|.|.+.|..|.... ..|.|
T Consensus 41 ~~v~W-~k~~~~~~~--~-~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V 96 (98)
T 1gl4_B 41 YTLVW-TRLHNGKLP--S-RAMDFNGILTIRNVQPS------DAGTYVCTGSNMFAMDQGTATLHV 96 (98)
T ss_dssp CEEEE-EEGGGBCCC--T-TEEEETTEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cEEEE-EeCCCCCCC--c-eeecCCCEEEEeCCChh------hCEEEEEEecCCCCccccEEEEEE
Confidence 68999 655332221 1 23445779999999766 999999999999987664 44443
No 243
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.98 E-value=4.7e-10 Score=61.72 Aligned_cols=58 Identities=10% Similarity=0.236 Sum_probs=41.4
Q ss_pred cEEEEEccCCeeeeccccceEEee--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALS--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
|.|.| +++|..+....+...... ++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|
T Consensus 44 p~v~W-~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~V 104 (106)
T 1nct_A 44 PTVTW-LRKGQVLSTSARHQVTTTKYKSTFEISSVQAS------DEGNYSVVVENSEGKQEAEFTLTI 104 (106)
T ss_dssp CBCCB-CSSSSCCTTCSSEEEEECSSEEEEEECCCCSS------CCSEEEECCBCSSCBCCEEEEEEE
T ss_pred CEEEE-EECCEECCCCCCEEEEECCCEEEEEECcCCch------hCEEEEEEEEeCCCeEEEEEEEEE
Confidence 67899 899988764333222222 247999999766 999999999999987653 44443
No 244
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.98 E-value=1.3e-09 Score=61.98 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=30.0
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
..|.|.++.+. |+|.|+|.+.|..|...+ ..|.|..
T Consensus 75 ~~L~I~~v~~~------DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 75 FEMQIIKAKDN------FAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEECSCCTT------SCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEccCCcc------cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 47999999766 999999999999987765 6666665
No 245
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.98 E-value=3.4e-09 Score=58.31 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=28.1
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
..|.|.++..+ |+|.|+|.+.|..|...+ ..|.|
T Consensus 72 ~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~L~V 106 (108)
T 3cx2_A 72 FELHITDAQPA------FTGSYRCEVSTKDKFDCSNFNLTV 106 (108)
T ss_dssp EEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEecCCCc------cCEEEEEEEecCCCceEEEEEEEE
Confidence 47999999766 999999999999998774 55554
No 246
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=2.5e-09 Score=58.90 Aligned_cols=61 Identities=23% Similarity=0.258 Sum_probs=43.2
Q ss_pred CcEEEEEccCCeeeecc-ccceEEee-CC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYV-KDLRIALS-NG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~-~~~~~~~~-~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|.| +++|..+... ........ ++ .|.|.++..+ |+|.|+|.+.|..|.... ..|.|..
T Consensus 37 ~p~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 37 KPKIYW-FKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLD------DDGNYTIMAANPQGRISCTGRLMVQA 102 (110)
T ss_dssp CCEEEE-ECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTT------TCSCCEEEEECTTCCEEECCCEEEEC
T ss_pred CCEEEE-EECCEECCCCCCeEEEEECCCcEEEEEECCCChh------hCEEEEEEEEECCCeEEEEEEEEEEC
Confidence 378999 8898888642 22222222 33 5999999766 999999999999998764 4455543
No 247
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.97 E-value=4.1e-10 Score=71.52 Aligned_cols=78 Identities=21% Similarity=0.309 Sum_probs=48.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC----c-e--EEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG----V-I--LSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g----~-~--~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
.|.|.++..+ |+|.|.|.+.|..+ . . ....|.|.... . ...+ |.+....+....+..|+.+.|
T Consensus 101 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~--~-~~~~-P~v~~~~~~~~~~~~g~~v~L 170 (279)
T 2wbj_D 101 TLTVTSAHPE------DSSFYICSARDLTSGANNEQFFGPGTRLTVTEDL--K-NVFP-PEVAVFEPSEAEISHTQKATL 170 (279)
T ss_dssp EEEESSCCGG------GCEEEEEEEEETTCBTSCCEEECCCEEEEEESCG--G-GCBC-CEEEEEECCHHHHHHHSCCEE
T ss_pred EEEEccCCcc------CCEEEEEEEcccccCCccceeeCCCEEEEEecCC--C-CCCC-CEEEEECCCcccccCCCceEE
Confidence 7999999766 99999999999432 1 1 11334444310 0 0011 544433223333346899999
Q ss_pred EeeecCc-CC-ceeEEe
Q psy11568 101 DCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 101 ~C~~~g~-P~-p~i~W~ 115 (116)
.|.+.|. |. |.++|+
T Consensus 171 ~C~~~g~~P~~~~v~W~ 187 (279)
T 2wbj_D 171 VCLATGFYPDHVELSWW 187 (279)
T ss_dssp EEEEEEEBSSCEEEEEE
T ss_pred EEEEeeEcCCCcEEEEE
Confidence 9999997 43 699997
No 248
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=4.6e-10 Score=60.71 Aligned_cols=53 Identities=17% Similarity=0.315 Sum_probs=38.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.+.| +++|..+..... ........|.|.++..+ |+|.|+|.|.|..|....
T Consensus 40 ~p~v~W-~~~g~~~~~~~~-~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~~~ 92 (99)
T 2yr3_A 40 VPRITW-LLNGQPIQYARS-TCEAGVAELHIQDALPE------DHGTYTCLAENALGQVSC 92 (99)
T ss_dssp CCCCEE-EESSSBCSSCCC-EEETTEEEEEECSCCTT------CCBCEEEEEECSSCEEEE
T ss_pred CCeEEE-EECCEECcccce-EeeCCeEEEEECCCChh------hCEEEEEEEEECCCeEEE
Confidence 368999 888887753211 11222247999999766 999999999999987653
No 249
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=5.2e-10 Score=62.94 Aligned_cols=36 Identities=14% Similarity=0.005 Sum_probs=28.9
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
..|.|.++.+. |+|.|+|.+.|..|...+ ..|.|..
T Consensus 80 ~~L~I~~v~~~------D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 80 VELHIGKVVLG------DRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp EEEEESSCCTT------TCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred EEEEEeeCChh------hCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 47999999766 999999999999997664 4455543
No 250
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=98.97 E-value=9.3e-09 Score=72.83 Aligned_cols=100 Identities=14% Similarity=0.063 Sum_probs=63.8
Q ss_pred cEEEEEccC--CeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEeCcEeeeecc
Q psy11568 2 YVLLWLIRD--NTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKAGSVVSLLDI 77 (116)
Q Consensus 2 p~v~W~~~~--g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~~~~~~~~~~ 77 (116)
+.++| +++ |..+..............|.|.++..+ |+|.|+|.+.+..+...+ ..+.+...
T Consensus 157 ~~v~w-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~------d~G~Y~C~~~~~~~~~~s~~~~~~v~~~-------- 221 (772)
T 3v2a_R 157 LNVSL-CARYPEKRFVPDGNRISWDSKKGFTIPSYMIS------YAGMVFCEAKINDESYQSIMYIVVVVGY-------- 221 (772)
T ss_dssp CCEEE-EEETTTEEECCCSSSCEEETTTEEEEEGGGTT------TCSEEEEEEEETTEEEECCEEEEEEECC--------
T ss_pred cEEEE-EecCCCccccCCCceeecCCCCCeEecCCChh------hCeEEEEEEEECCceEEEEEEEEEEecC--------
Confidence 56899 665 555432221112233457999999766 999999999987543333 22222221
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecC--cCCceeEEeC
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQG--SPTPKIEWLI 116 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g--~P~p~i~W~~ 116 (116)
+.+.+...++....+..|+++.|.|.+.+ .|.+.+.|+.
T Consensus 222 ~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~ 262 (772)
T 3v2a_R 222 RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEY 262 (772)
T ss_dssp CEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEEC
T ss_pred ccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEec
Confidence 01334444445578899999999999998 4566899974
No 251
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.96 E-value=1.5e-09 Score=65.58 Aligned_cols=60 Identities=17% Similarity=0.341 Sum_probs=44.7
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~ 67 (116)
+|.++| +++|..+...........++.|.|.++..+ |+|.|+|.|.|..|...+..+.+.
T Consensus 138 pp~i~W-~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~s~~~~l~ 197 (208)
T 3r4d_A 138 GANIQW-LFNSQSLQLTERMTLSQNNSILRIDPIKRE------DAGEYQCEISNPVSVRRSNSIKLD 197 (208)
T ss_dssp TCEEEE-EETTEECCCCSSEEEETTTTEEEESSCCGG------GCEEEEEEEECTTCCEECCCEEEC
T ss_pred CCceEE-EECCEeCCCCCCeEEcCCCCEEEEeccCHH------hCeEEEEEEecCCCcccCCceeee
Confidence 378999 889998864333333333468999999766 999999999999999887444433
No 252
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.96 E-value=1.7e-09 Score=73.30 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=51.2
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
+.|.|.++..+ |+|.|+|.|.|..|.... ..|.+.. ...+ |.+...++....+..|+.+.|.|.+.
T Consensus 309 ~~L~I~~~~~~------d~G~Y~C~a~n~~~~~~~~~~v~~~~------~~~~-P~v~~~~~~~~~v~~g~~~~L~C~~~ 375 (475)
T 1iga_A 309 SVLPGCAEPWN------HGKTFTCTAAYPESKTPLTATLSKSG------NTFR-PEVHLLPPPSEELALNELVTLTCLAR 375 (475)
T ss_pred EEEEEchHHhc------cCCcEEEEEEcCCCCCceEEEeecCC------CCCC-CeEEEECCChHHhccCCceEEEEEEe
Confidence 36889999665 999999999999876532 3332211 0112 55554443333456799999999999
Q ss_pred Cc-C-CceeEEe
Q psy11568 106 GS-P-TPKIEWL 115 (116)
Q Consensus 106 g~-P-~p~i~W~ 115 (116)
|. | .+.++|+
T Consensus 376 g~~P~~~~v~W~ 387 (475)
T 1iga_A 376 GFSPKDVLVRWL 387 (475)
T ss_pred eeECCCCEEEEE
Confidence 96 3 3589996
No 253
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.96 E-value=3.1e-09 Score=64.23 Aligned_cols=60 Identities=23% Similarity=0.323 Sum_probs=46.2
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
.|.++| +++|..+... ..+....++.|.|.++..+ |+|.|+|.|.|..|...+ ..|.|..
T Consensus 141 ~~~v~W-~~~~~~l~~~-~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 141 EPTISW-KKDGSPLDDK-DERITIRGGKLMITYTRKS------DAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp CCEEEE-EETTEEECTT-STTEEEETTEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCEEEE-EECCccCCCC-cceEEccCCeEEEeeCCHh------hCeeEEEEEecccCceecceEEEEEEe
Confidence 378999 8999988643 2245566789999999766 999999999999987654 4555554
No 254
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.96 E-value=5.9e-09 Score=63.05 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=44.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC---eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~---~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.+.| +++|.++...........++ .|.|.++..+ |+|.|+|.|.|..|.... ..|.|.
T Consensus 146 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 146 PPEVSW-LKNEKALAQTDHCNLKFEAGRTAYFTINGVSTA------DSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp CCEEEE-EETTEEECCCSSEEEEEETTTEEEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CceEEE-EECCeECccCCCEEEEEcCCCEEEEEEcCcchH------HCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 378999 99999987544433333323 7999999766 999999999999987664 445444
No 255
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.96 E-value=7.4e-10 Score=72.15 Aligned_cols=105 Identities=18% Similarity=0.222 Sum_probs=56.8
Q ss_pred cEEEEEccCCeeeeccccceEEee------CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEe------
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALS------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKA------ 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~------~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~------ 68 (116)
|.|+| +++|..+........... .+.|.|.++..+ | |.|+|.+.|..+... ...+.+..
T Consensus 152 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~ 223 (344)
T 1za6_B 152 VTVSW-NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG------T-QTYICNVNHKPSNTKVDKKVEPKSCDKTHT 223 (344)
T ss_dssp CCEEE-TTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHH------H-BCEEEEEEEGGGTEEEEEEECCCCC-----
T ss_pred eEEEE-ecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcC------C-CcEEEEEEeCCCCccceEeecccccccccc
Confidence 58999 999876421100001111 126888888554 7 999999999987543 22221100
Q ss_pred ------CcEe---eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCc-C-CceeEEeC
Q psy11568 69 ------GSVV---SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-P-TPKIEWLI 116 (116)
Q Consensus 69 ------~~~~---~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P-~p~i~W~~ 116 (116)
...+ .....+ |.+...++... ...|..+.|.|.+.|. | .+.++|+.
T Consensus 224 ~~~~~~~~~l~~~~~~~~~-P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k 280 (344)
T 1za6_B 224 CPPCGGGSSGGGSGGQPRE-PQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWES 280 (344)
T ss_dssp ---------------CCBC-CEEEEECCCGG-GGGSSSEEEEEEEEEEBSSCCEEEEES
T ss_pred cCCCCCCccccccCCCCcC-CEEEEeCCChH-hccCCcEEEEEEEeeEECCCeEEEEEE
Confidence 0000 001112 55443332221 2346779999999996 4 35889973
No 256
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.95 E-value=4.7e-09 Score=70.40 Aligned_cols=75 Identities=19% Similarity=0.317 Sum_probs=49.9
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--EE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--LS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.|..+.. .. ..|.|... ... .|.+...++.. .+..|+.+.|.|.
T Consensus 80 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~~~~-~~~~g~~v~L~C~ 146 (444)
T 1igt_B 80 YLQMSRLKSE------DTAMYYCARHGGYYAMDYWGQGTTVTVSSA-----KTT-APSVYPLAPVC-GDTTGSSVTLGCL 146 (444)
T ss_dssp EEEECSCCGG------GCEEEEEEEECSSSCEEEEBCCEEEEECSC-----CCB-CCEEEEECCCS-SCCCSSCEEEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEecCCcccccccCcEEEEecCC-----CCC-CCceeEecccc-cCCCCCcEEEEEE
Confidence 7999999766 9999999999986542 11 33444321 001 14443322121 2367999999999
Q ss_pred ecCc-CCc-eeEEe
Q psy11568 104 AQGS-PTP-KIEWL 115 (116)
Q Consensus 104 ~~g~-P~p-~i~W~ 115 (116)
+.|. |.| .++|+
T Consensus 147 ~~g~~P~p~~v~W~ 160 (444)
T 1igt_B 147 VKGYFPEPVTLTWN 160 (444)
T ss_dssp EEEEBSSCCEEEEG
T ss_pred EcceeCCCcEEEEe
Confidence 9985 777 99996
No 257
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.95 E-value=2.4e-10 Score=70.46 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=47.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce--EE--EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI--LS--RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~--~~--~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.|..+.. .. ..+.|... ... .|.+...++. .....|+.+.|.|.
T Consensus 92 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~p~v~~~~~~-~~~~~g~~v~L~C~ 158 (234)
T 2j6e_L 92 SLAISGLRSE------DEADYYCATWDDSLSAVIFGGGTKLTVLGQ-----PKA-APSVTLFPPS-SEELQANKATLVCL 158 (234)
T ss_dssp EEEEESCCST------TCSEEEEEEEETTTTEEEECCCBCCCBCCC-----CCC-CCCCCEECCC-HHHHTTSCCCEEEC
T ss_pred EEEECCCCHH------HCEEEEEEEEcCCcceeEecCCEEEEEecC-----CCC-CCcccccCCC-hhHhcCCceEEEEE
Confidence 7999999766 9999999999998731 11 12222110 001 1444333322 12345889999999
Q ss_pred ecCcCC--ceeEEe
Q psy11568 104 AQGSPT--PKIEWL 115 (116)
Q Consensus 104 ~~g~P~--p~i~W~ 115 (116)
+.|.++ +.++|+
T Consensus 159 ~~g~~p~~~~v~W~ 172 (234)
T 2j6e_L 159 ISDFFPGAVTVAWK 172 (234)
T ss_dssp CCBCSSCCCEEEEE
T ss_pred EEEEcCCceEEEEE
Confidence 998644 389996
No 258
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.94 E-value=4.5e-09 Score=62.42 Aligned_cols=59 Identities=25% Similarity=0.376 Sum_probs=43.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.+.| +++|..+...........++.|.|.++..+ |+|.|+|.|.|..|.... ..|.|
T Consensus 127 ~~~v~W-~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 127 EPAISW-FRNGKLIEENEKYILKGSNTELTVRNIINS------DGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp CCEEEE-EETTEECCCSSSEEEETTTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCeEEE-EECCEECcCCCcEEEecCCCEEEEcCCChh------hCeeEEEEEEeCCCceeEEEEEEE
Confidence 378999 899998865333223333568999999766 999999999999987764 44443
No 259
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.93 E-value=2.4e-09 Score=57.08 Aligned_cols=47 Identities=17% Similarity=0.288 Sum_probs=37.5
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.+.| +++|..+... ..+.|.|.++..+ |+|.|.|.+.|..|...+
T Consensus 32 ~p~i~W-~~~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s 78 (91)
T 3bfo_A 32 IPHYQW-FKNELPLTHE-------TKKLYMVPYVDLE------HQGTYWCHVYNDRDSQDS 78 (91)
T ss_dssp CCEEEE-EETTEECTTC-------CSSEEEESSCCGG------GCEEEEEEEECSSCEEEC
T ss_pred CCEEEE-EcCCeeCCcC-------CCCeEEECCCCHH------hCEEEEEEEEcCCCCEEe
Confidence 378999 8898877532 2358999999766 999999999999986654
No 260
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.93 E-value=1.5e-09 Score=60.79 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=40.4
Q ss_pred cEEEEEccCCeeeec----cccceE------EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeC
Q psy11568 2 YVLLWLIRDNTVIAY----VKDLRI------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAG 69 (116)
Q Consensus 2 p~v~W~~~~g~~~~~----~~~~~~------~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~ 69 (116)
+.++| +++|..+.. ...... ....+.|.|.++..+ |+|.|+|.|.|..|.... ..|.|...
T Consensus 40 ~~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------DsG~Y~C~a~n~~g~~~~~~~l~V~~~ 111 (122)
T 3s35_X 40 IDFNW-EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS------DQGLYTCAASSGLMTKKNSTFVRVHEK 111 (122)
T ss_dssp CEEEE-ECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred EEEEE-ECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcc------cCEEEEEEEccCCCceEEEEEEEEecc
Confidence 57899 777664421 011111 112347999999766 999999999999987764 55666543
No 261
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.93 E-value=5.5e-09 Score=70.76 Aligned_cols=105 Identities=12% Similarity=0.134 Sum_probs=57.7
Q ss_pred EEEEEccCCeeeeccccceEE-eeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeC--cEe-
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIA-LSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAG--SVV- 72 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~-~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~--~~~- 72 (116)
.|+| ++++............ ..+ +.|.|..+..+ |+|.|+|.+.|..+......+.+..+ ...
T Consensus 160 ~v~W-~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~ 232 (475)
T 1iga_A 160 SVTW-SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCL------AGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTP 232 (475)
T ss_pred EEEE-cCCCcccceEeCCceecCCCCcEEEEEEEEechhHcC------CCceEEEEEEECCCCceeeeEecccccCcccc
Confidence 8999 8887543211000011 112 24667666444 89999999999987433333332110 000
Q ss_pred -------eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCC---ceeEE
Q psy11568 73 -------SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPT---PKIEW 114 (116)
Q Consensus 73 -------~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~---p~i~W 114 (116)
.......|.+...++....+.+|+++.|.|.+.|.++ +.++|
T Consensus 233 ~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 233 SPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred cccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE
Confidence 0000011444333333444578999999999998754 68999
No 262
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.93 E-value=3.6e-09 Score=66.22 Aligned_cols=79 Identities=19% Similarity=0.306 Sum_probs=49.3
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCc--e--EEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGV--I--LSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~--~--~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
..|.|.++..+ |+|.|.|.+.+..+. . ....|.|... +. ...+ |.+....+....+..|+.+.|.|
T Consensus 76 ~~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~--~~-~~~~-P~v~~~~~~~~~~~~g~~~~L~C 145 (252)
T 1oga_E 76 FPLTVTSAQKN------PTAFYLCASSSRSSYEQYFGPGTRLTVTED--LK-NVFP-PEVAVFEPSEAEISHTQKATLVC 145 (252)
T ss_dssp CCEEECSCCSC------CCEEEEEEEESSTTSCCEECCCEEEEEESC--GG-GCBC-CEEEEECCCHHHHHHHSEEEEEE
T ss_pred EEEEECcCChh------hCEEEEEEEecCCccceeECCCEEEEEecc--cC-CCCC-CeEEEECCChhhhccCCceEEEE
Confidence 37999999766 999999999986211 1 1123444431 00 0012 55544332333344689999999
Q ss_pred eecCc-CC-ceeEEe
Q psy11568 103 AAQGS-PT-PKIEWL 115 (116)
Q Consensus 103 ~~~g~-P~-p~i~W~ 115 (116)
.+.|. |. +.++|+
T Consensus 146 ~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 146 LATGFYPDHVELSWW 160 (252)
T ss_dssp EEEEEBSSCEEEEEE
T ss_pred EEeeEcCCCcEEEEE
Confidence 99986 65 489996
No 263
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.92 E-value=7.7e-10 Score=74.51 Aligned_cols=102 Identities=21% Similarity=0.305 Sum_probs=56.7
Q ss_pred EEEEEccCCeeeecccc-ceEEeeCCeEEecCCCCCCCCCCCC---ceEEEEEEEcCCCceE-EEEEEEEeCcEeeeecc
Q psy11568 3 VLLWLIRDNTVIAYVKD-LRIALSNGSLMFPPFPETGFRPDVH---STVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDI 77 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~-~~~~~~~~~l~i~~v~~~~~~~~~d---~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~ 77 (116)
.|+| +++|.++..... ......++.+.+..+..- ...| +|.|+|.|.|..+... ...+.+... ...
T Consensus 284 ~i~W-~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i---~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~-----~~~ 354 (457)
T 1hzh_H 284 KFNW-YVDGVEVHNAKTKPREEQYNSTYRVVSVLTV---LHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG-----QPR 354 (457)
T ss_dssp EEEE-EETTEEECCCEEEEEEECTTSCEEEEEEECC---CHHHHHHTCCEEEEEECTTSSSCEEEEECCCCC-----CCB
T ss_pred EEEE-EeCCccccccccccceecCCCcEEEEEEEEE---CHHHccCCCcEEEEEeCCCCCCcceEEEEcccC-----CCC
Confidence 8999 999988753211 122334555555432100 1225 9999999998754432 222221000 011
Q ss_pred CCCceEecCCCeEEEeCCCcEEEEeeecCcCCc--eeEEe
Q psy11568 78 QGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTP--KIEWL 115 (116)
Q Consensus 78 ~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~ 115 (116)
+ |.+...++....+..|+ +.|.|.+.|.|+| .++|+
T Consensus 355 ~-P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~ 392 (457)
T 1hzh_H 355 E-PQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWE 392 (457)
T ss_dssp C-CEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEE
T ss_pred C-CeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEE
Confidence 2 55554442322233455 9999999997554 89997
No 264
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.92 E-value=1.2e-09 Score=68.25 Aligned_cols=99 Identities=15% Similarity=0.188 Sum_probs=56.9
Q ss_pred EEEEEccCCeeeeccc-cceEEe------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeee
Q psy11568 3 VLLWLIRDNTVIAYVK-DLRIAL------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSL 74 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~-~~~~~~------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~ 74 (116)
.|+| ++++..+.... ...... ....|.|.++..+ |+|.|+|.+.|..+... ...+.+.. .
T Consensus 52 ~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~------D~g~Y~C~~~~~~~~~~~~~~v~~~~-----~ 119 (239)
T 1i1c_A 52 RFSW-FIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWL------NGKTFKCKVNSGAFPAPIEKSISKPE-----G 119 (239)
T ss_dssp EEEE-EESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHH------TTCCEEEEEECSSSSSCEEEEECCCS-----S
T ss_pred EEEE-EECCccccCcccccceEcCCCcEEEEEEEEEEhhHcc------CCCeEEEEEecccCCCCcEEEEecCC-----C
Confidence 7999 66665553211 111111 1236888888655 99999999999987542 22221100 0
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCc-CC-ceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~ 115 (116)
...+ |.+...++.. ....|+.+.|.|.+.|. |. ..++|+
T Consensus 120 ~~~~-P~v~v~~~~~-~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (239)
T 1i1c_A 120 TPRG-PQVYTMAPPK-EEMTQSQVSITCMVKGFYPPDIYTEWK 160 (239)
T ss_dssp CCBC-CEEEEECCCG-GGGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCcC-CEEEEECCCh-HHhcCCcEEEEEEEeeeECCCeEEEEE
Confidence 0112 5554443221 12347889999999984 54 378996
No 265
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.92 E-value=2.6e-09 Score=67.47 Aligned_cols=75 Identities=19% Similarity=0.312 Sum_probs=42.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc------------eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV------------IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFS 93 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~------------~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 93 (116)
.|.|.++..+ |+|.|.|.+.+..|. .. ...|.|... ... .|.+....+. ..+.
T Consensus 80 sL~I~~v~~~------DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~-----~~~-~P~v~~~~p~-~~~~ 146 (257)
T 3bn9_D 80 YLQMSSLRAE------DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA-----STK-GPSVFPLAPS-SKST 146 (257)
T ss_dssp EEEEESCCGG------GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS-----CCB-CCEECCCCC------
T ss_pred EEEECCCChh------hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC-----CCc-CCcEEEecCc-cccc
Confidence 7999999766 999999999997651 11 124444421 001 1444333222 2356
Q ss_pred CCCcEEEEeeecCc-CCc-eeEEe
Q psy11568 94 NESGGRLDCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 94 ~g~~~~l~C~~~g~-P~p-~i~W~ 115 (116)
.|+.+.|.|.+.|. |.| .++|+
T Consensus 147 ~g~~v~L~C~~~g~~P~pi~v~W~ 170 (257)
T 3bn9_D 147 SGGTAALGCLVKDYFPEPVTVSWN 170 (257)
T ss_dssp ------CCCEEEEEBSSCCEEEET
T ss_pred CCCcEEEEEEEeeEECCCcEEEEe
Confidence 79999999999986 877 89996
No 266
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.91 E-value=8.1e-10 Score=73.95 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=49.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|.|.+.|..+... ...|.|... ... .|.+...++. ..+..|+.+.|.|.+.|
T Consensus 79 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~~~-~~~~~G~~v~L~C~~~g 145 (434)
T 1igy_B 79 NIHLSSLTSD------DSAVYYCVREGEVPYWGQGTTVTVSSA-----KTT-PPSVYPLAPG-SAAQTNSMVTLGCLVKG 145 (434)
T ss_dssp CEEECSBCGG------GCSEECCCCSSSSCCCCCCEECEECCS-----CCB-CCCEEEECCC-CCCCCTTEEEEEEEEEE
T ss_pred EEEECCCChH------HCEEEEEEEEccccccCCceEEEEccC-----CCC-CCeEEEcCCc-cccCCCCcEEEEEEEee
Confidence 7999999766 99999999998643222 234444321 001 1444433212 23468999999999999
Q ss_pred c-CCc-eeEEe
Q psy11568 107 S-PTP-KIEWL 115 (116)
Q Consensus 107 ~-P~p-~i~W~ 115 (116)
. |.| .++|+
T Consensus 146 ~~P~p~~v~W~ 156 (434)
T 1igy_B 146 YFPEPVTVTWN 156 (434)
T ss_dssp EBSSCCEEEET
T ss_pred ecCCCeEEEEe
Confidence 7 777 99996
No 267
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.91 E-value=6e-09 Score=66.63 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=51.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC-Cc-eE----EEEEEEEeC-----c--EeeeeccCCCceEecCCCeEEEeC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA-GV-IL----SRFVHVKAG-----S--VVSLLDIQGPLFRIEPPYRFEFSN 94 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~-~~----~~~~~v~~~-----~--~~~~~~~~~p~~~~~~~~~~~~~~ 94 (116)
.|.|.++..+ |+|.|.|.+.|.. |. .. ...|.|... . .+... ...+.+...+ ....+.+
T Consensus 102 sL~I~~v~~~------DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~-~~~~~v~~~p-~~~~v~~ 173 (291)
T 2gki_A 102 YMELSSLTSE------DSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGG-GSDLVMSQSP-SSLAVSA 173 (291)
T ss_dssp EEEECSCCGG------GCEEEEEEEECGGGTTCEEEECCCEEEEECC-----------------CCCEECSC-SEEEEET
T ss_pred EEEECcCCHH------HCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCC-CccceEEcCC-CEEEEcC
Confidence 6999999766 9999999999874 21 11 123333320 0 00000 0112333333 6778899
Q ss_pred CCcEEEEeeecCcCCc------eeEEe
Q psy11568 95 ESGGRLDCAAQGSPTP------KIEWL 115 (116)
Q Consensus 95 g~~~~l~C~~~g~P~p------~i~W~ 115 (116)
|+++.|.|.+.+.|.| .+.|+
T Consensus 174 G~~v~L~C~~~~~~~~~~~~~~~v~W~ 200 (291)
T 2gki_A 174 GEKVTMSCKSSQSLFNSRTRKNYLAWY 200 (291)
T ss_dssp TSCEEEEEEESSCCEETTTTEECEEEE
T ss_pred CCcEEEEEEcCCccccccccceeEEEE
Confidence 9999999999998876 89997
No 268
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.91 E-value=5.8e-09 Score=64.37 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=45.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
.|.|.++..+ |+|.|.|.+.+..+... ...|.|... ... .|.+....+. ..+..|+.+.|.|.+.
T Consensus 80 sL~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~v~~~~~~-~~~~~g~~v~L~C~~~ 146 (227)
T 1mju_H 80 YMQLSSLTSD------DSAVYYCANKLGWFPYWGQGTLVTVSAA-----KTT-APSVYPLAPV-CGDTSGSSVTLGCLVK 146 (227)
T ss_dssp EEEECSCCGG------GCEEEEEEEEETTEEEECCCEEEEECSS-----CCB-CCEEEEECCC-C------CEEEEEEEE
T ss_pred EEEECCCCcc------cCEEEEEEECCCCceEEcCcEEEEEcCC-----CCC-CCEEEEecCC-ccccCCCcEEEEEEee
Confidence 7999999766 99999999998643221 134444421 001 1554433322 2456799999999999
Q ss_pred Cc-CCc-eeEEe
Q psy11568 106 GS-PTP-KIEWL 115 (116)
Q Consensus 106 g~-P~p-~i~W~ 115 (116)
|. |.| .++|+
T Consensus 147 g~~P~p~~v~W~ 158 (227)
T 1mju_H 147 GYFPEPVTLTWN 158 (227)
T ss_dssp EEBSSCCEEEEG
T ss_pred cEeCCCeEEEEe
Confidence 86 777 99996
No 269
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.89 E-value=3.8e-09 Score=65.74 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=46.9
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-c-----eE--EEEEEEEeCcEeeeeccCCCce-EecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-V-----IL--SRFVHVKAGSVVSLLDIQGPLF-RIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-~-----~~--~~~~~v~~~~~~~~~~~~~p~~-~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.+..+ . .. ...|.|... ..... .+ |.. +..+ ....+..|+.+
T Consensus 81 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~-~~~~~-~~-p~~~v~~p-~~~~~~~g~~v 150 (242)
T 1hxm_B 81 TLTIHNVEKQ------DIATYYCALWEAQQELGKKIKVFGPGTKLIITDK-QLDAD-VS-PKPTIFLP-SIAETKLQKAG 150 (242)
T ss_dssp EEEECSCCGG------GCEEEEEEEEEECSSTTCEEEEECCCEEEEEESS-CCCSC-CS-CBCCCCCC-CGGGGGSSSCE
T ss_pred EEEECCCCcc------cCEEEEEeeecCCccccccceeEcCcEEEEEccc-ccCCC-cC-CCceEECC-ChhhcccCCCc
Confidence 6999999766 99999999988631 1 11 134444431 00000 00 211 1112 22234569999
Q ss_pred EEEeeecCc-CC-ceeEEe
Q psy11568 99 RLDCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 99 ~l~C~~~g~-P~-p~i~W~ 115 (116)
.|.|.+.|. |. +.++|+
T Consensus 151 ~L~C~~~g~~P~~~~v~W~ 169 (242)
T 1hxm_B 151 TYLCLLEKFFPDVIKIHWE 169 (242)
T ss_dssp EEEEEEEEESSCCEEEEEE
T ss_pred eEEEEEeeEECCCeEEEEE
Confidence 999999987 64 789996
No 270
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.88 E-value=7.5e-09 Score=57.53 Aligned_cols=59 Identities=25% Similarity=0.381 Sum_probs=38.3
Q ss_pred CcEEEEEccCCeeeeccc----cceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVK----DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~----~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+| +++|..+.... .......++.+.+..+...+ ....|+|.|.|.|.|..|...+
T Consensus 38 ~p~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-v~~~D~G~Y~C~a~N~~G~~~s 100 (117)
T 2v9t_A 38 TPTIEW-YKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGR-KSRPDEGVYVCVARNYLGEAVS 100 (117)
T ss_dssp CCEEEE-EETTEECCCTTTCSSCSEEECTTSCEEESSCCCBT-TBCSSCEEEEEEEEETTEEEEC
T ss_pred CCeEEE-EECCEeccccCCCCcceeEEecCCcEEEEEEEeCC-CCcCcCEEEEEEEEeCccceEe
Confidence 478999 88998886422 11234455566555442100 0234999999999999998875
No 271
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.88 E-value=8e-09 Score=61.84 Aligned_cols=58 Identities=17% Similarity=0.187 Sum_probs=43.7
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.++| ++++..+.. ..+....++.|.|.++..+ |+|.|+|.+.|..|.... ..|.|.
T Consensus 142 ~p~v~W-~~~~~~~~~--~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 142 VPDIRW-RKVLEPMPS--TAEISTSGAVLKIFNIQLE------DEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCEEEE-EETTBCCCT--TCEEETTTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCceEE-EeCCCcCCC--ceeecCCCCEEEEccCChh------hCEEEEEEEEecCCceeeeEEEEEe
Confidence 478999 888887653 2334455679999999766 999999999999987764 445443
No 272
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.87 E-value=3e-08 Score=60.65 Aligned_cols=73 Identities=15% Similarity=0.281 Sum_probs=48.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-ceE--EEEEEEEeCcEeeeeccCCCceE-ecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-VIL--SRFVHVKAGSVVSLLDIQGPLFR-IEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-~~~--~~~~~v~~~~~~~~~~~~~p~~~-~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.+... ... ...+.|... ... .|.+. ..+ ... ..|+.+.|.|.
T Consensus 82 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~-----~~~-~p~v~~~~~-~~~--~~g~~v~L~C~ 146 (221)
T 3m8o_H 82 FLQMNSLKSD------DTAMYYCVIRGDVYNRQWGQGTLVTVSSA-----SPT-SPKVFPLSL-CST--QPDGNVVIACL 146 (221)
T ss_dssp EEEECSCCGG------GCEEEEEEEESCTTCCCBBCCEEEEECSC-----CCB-CCEEEEEEC-CSC--CCTTEEEEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEECCChhheECCCEEEEEecC-----CCC-CCeEEEecC-ccc--ccCCCEEEEEE
Confidence 5999999766 99999999998731 111 234444321 001 25544 233 222 67999999999
Q ss_pred ecC-cCC--ceeEEe
Q psy11568 104 AQG-SPT--PKIEWL 115 (116)
Q Consensus 104 ~~g-~P~--p~i~W~ 115 (116)
+.+ .|. +.++|+
T Consensus 147 ~~~~~P~~~~~v~W~ 161 (221)
T 3m8o_H 147 VQGFFPQEPLSVTWS 161 (221)
T ss_dssp EEEEBSSCSEEEEES
T ss_pred EEeeECCCCEEEEEE
Confidence 998 676 489996
No 273
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.87 E-value=4.9e-09 Score=65.62 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=47.0
Q ss_pred EEecCCCCCCCCCCCCceEEEEEEEcCCC---ce-E---EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 29 LMFPPFPETGFRPDVHSTVYRCRASNEAG---VI-L---SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 29 l~i~~v~~~~~~~~~d~G~y~C~a~n~~g---~~-~---~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
|.|.++..+ |+|.|.|.+.+..+ .. . ...+.|... +. ... .|.+...++....+..|+.+.|.
T Consensus 76 L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~--~~-~~~-~P~v~~~~~~~~~~~~g~~~~L~ 145 (253)
T 3to4_D 76 LRLQVANMS------QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLED--LK-NVF-PPEVAVFEPSEAEISHTQKATLV 145 (253)
T ss_dssp CEEEEESCS------SCEEEEEEEECSCCSTTCCEEECCCEEEEEESC--ST-TCB-CCEEEEEECCHHHHHHHSEEEEE
T ss_pred EEEccCChh------hCeEEEEEEecCCCCcccceEECCCEEEEEecC--CC-CCC-CCeEEEeCCChhhcccCCceEEE
Confidence 999999766 99999999987643 11 1 123444321 00 001 14443332222233346899999
Q ss_pred eeecC-cCCc-eeEEe
Q psy11568 102 CAAQG-SPTP-KIEWL 115 (116)
Q Consensus 102 C~~~g-~P~p-~i~W~ 115 (116)
|.+.| .|.| .++|+
T Consensus 146 C~~~g~~P~~i~v~W~ 161 (253)
T 3to4_D 146 CLATGFYPDHVELSWW 161 (253)
T ss_dssp EEEEEEBSSCEEEEEE
T ss_pred EEEceEECCcEEEEEE
Confidence 99999 6666 88996
No 274
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.86 E-value=6.3e-08 Score=61.59 Aligned_cols=101 Identities=17% Similarity=0.212 Sum_probs=60.9
Q ss_pred CcEEEEEccCCeeeeccccceEEee--CCeEEecC-CCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeec
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALS--NGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLD 76 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~--~~~l~i~~-v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~ 76 (116)
.|.++| +++|..+........... .+.|.|.+ +..+ |+|.|+|.|.|..|.... ..|.|....
T Consensus 133 ~p~i~W-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~------d~G~Y~C~a~N~~G~~~~~~~l~v~~~P------ 199 (305)
T 2nzi_A 133 DPVITW-QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERK------DAGFYVVCAKNRFGIDQKTVELDVADVP------ 199 (305)
T ss_dssp CCEEEE-EESSSBCCSSSSCEEEECSSEEEEEETTCCCST------TCEEEEEEEEETTEEEEEEEEEEEEBCC------
T ss_pred CCEEEE-EECCEECCCCCcEEEEEcCCceEEEEecCCccC------ccEEEEEEEEeCCCceeeEEEEEEecCC------
Confidence 378999 888888764333333322 23788888 8655 999999999999988764 556655320
Q ss_pred cCCCceE--ec-CCCeEEE------eCCCcEEEEeeecCcCCceeEEe
Q psy11568 77 IQGPLFR--IE-PPYRFEF------SNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 77 ~~~p~~~--~~-~~~~~~~------~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.+ |... .. ......+ ..|....+.|.+...|.+...|.
T Consensus 200 ~~-p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~ 246 (305)
T 2nzi_A 200 DP-PRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWL 246 (305)
T ss_dssp CC-CEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEE
T ss_pred CC-CCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccE
Confidence 00 2111 00 0111111 12455567787777777777774
No 275
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.86 E-value=1.4e-08 Score=55.26 Aligned_cols=47 Identities=17% Similarity=0.384 Sum_probs=35.5
Q ss_pred EEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 4 LLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 4 v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
|.| +++|+.+....+......+. .|.|.++..+ |+|.|+|.+.|..+
T Consensus 41 v~W-~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~~~ 89 (104)
T 2e6p_A 41 ATW-YKDGQKVEESELLVVKMDGRKHRLILPEAKVQ------DSGEFECRTEGVSA 89 (104)
T ss_dssp CEE-EETTEECCCBTTBEEEEETTEEEEEESSCCTT------TCEEEEEECSSCCC
T ss_pred cEE-eeCCEECCCCCCEEEEeCCCEEEEEECCCChh------hCEEEEEEECCceE
Confidence 899 99999886544433333333 6999999766 99999999999854
No 276
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.86 E-value=1.1e-08 Score=61.12 Aligned_cols=58 Identities=24% Similarity=0.251 Sum_probs=42.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVH 65 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~ 65 (116)
.|.++| +++|..+...........++ .|.|.++..+ |+|.|+|.|.|..|...+ ..|.
T Consensus 132 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~ 192 (194)
T 2a38_A 132 TPVVKF-YRDGAEIQSSLDFQISQEGDLYSLLIAEAYPE------DSGTYSVNATNSVGRATSTAELL 192 (194)
T ss_dssp CCEEEE-EETTEECCCSSSEEEEEETTEEEEEEEEECGG------GCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCeEEE-EECCEECCCCCcEEEEEcCCEEEEEECCCChh------cCeEEEEEEEeCCCceEEEEEEE
Confidence 378999 89999886543333333333 6999999766 999999999999987664 4443
No 277
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=98.85 E-value=2.6e-09 Score=75.41 Aligned_cols=89 Identities=16% Similarity=0.179 Sum_probs=41.0
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc---eEE---EEEEEEeCcEeee
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV---ILS---RFVHVKAGSVVSL 74 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~---~~~---~~~~v~~~~~~~~ 74 (116)
.|+++| +++|.++......+....++.|.|.++..+ |+|.|.|.|.+..+. ... ..|.|..+
T Consensus 561 ~a~v~W-~~~~~~l~~~~~~~~~~~~~~LlI~~v~~~------DsG~Y~C~A~e~~~~~~~~~~~~~~~l~V~v~----- 628 (663)
T 1olz_A 561 LARVFW-KFQNGVLKAESPKYGLMGRKNLLIFNLSEG------DSGVYQCLSEERVKNKTVFQVVAKHVLEVKVV----- 628 (663)
T ss_dssp TCEEEE-EESSSBCCCCSSSBCCTTTTCEEECSCCGG------GCEEEEEEEEEECSSSEEEEEEEEEEEEEEC------
T ss_pred CCcEEE-EECCeeccccCcceEEecCCeEEEEecCcc------cCeEEEEEEEECccCCCceEEEEEEEEEEEeC-----
Confidence 478999 888877654333233334678999999765 999999999998422 221 33444443
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
|.+...|.......+|+.+.+.|.+.+
T Consensus 629 -----P~~~~~p~~~~~~~~g~~~~~~~~~~~ 655 (663)
T 1olz_A 629 -----PKPVVAPTLSVVQTEGSRIATKVLVAS 655 (663)
T ss_dssp --------------------------------
T ss_pred -----CccCCCCCChhhhhcCCceEEEeeccc
Confidence 777666655667778999999998754
No 278
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.83 E-value=5.7e-08 Score=60.13 Aligned_cols=74 Identities=22% Similarity=0.397 Sum_probs=44.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEE--cCCCc---eE--EEEEEEEeCcEeeeeccCCCceEe-cCCCeEEEeCC-CcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRAS--NEAGV---IL--SRFVHVKAGSVVSLLDIQGPLFRI-EPPYRFEFSNE-SGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~--n~~g~---~~--~~~~~v~~~~~~~~~~~~~p~~~~-~~~~~~~~~~g-~~~ 98 (116)
.|.|.++..+ |+|.|.|.+. +..+. .. ...|.|... ... .|.+.. .+ .. .+..| +.+
T Consensus 79 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~v~~~~p-~~-~~~~g~~~v 144 (232)
T 1dn0_B 79 SLKLSSVTAA------DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSG-----SAS-APTLFPLVS-CE-NSPSDTSSV 144 (232)
T ss_dssp EEEECSCCGG------GCEEEEEEECSSTTSCSCCSEECCCEEEEECSS-----CCB-CCEEEEEEC-C-------CCSE
T ss_pred EEEECCCCcc------cCEEEEEEEecCCcCCchhhhcccceEEEEccC-----CCC-CCceEEecc-cc-ccCCCCCcE
Confidence 7999999766 9999999998 43121 11 134444431 001 144433 33 22 34467 999
Q ss_pred EEEeeecCc-CCc-eeEEe
Q psy11568 99 RLDCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 99 ~l~C~~~g~-P~p-~i~W~ 115 (116)
.|.|.+.|. |.| .++|+
T Consensus 145 ~L~C~~~g~~P~p~~v~W~ 163 (232)
T 1dn0_B 145 AVGCLAQDFLPDSITFSWK 163 (232)
T ss_dssp EEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEEEEEeCCCeEEEEE
Confidence 999999986 877 99997
No 279
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=6.8e-09 Score=56.46 Aligned_cols=57 Identities=14% Similarity=0.276 Sum_probs=39.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~ 68 (116)
|.|.| +++|..+....+......+. .|.|.++..+ |+|.|+|.+.|. .....|.|..
T Consensus 37 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~---~~~~~l~V~~ 95 (103)
T 2edf_A 37 TPVHW-LKDRKAIRKSQKYDVVCEGTMAMLVIRGASLK------DAGEYTCEVEAS---KSTASLHVEE 95 (103)
T ss_dssp CCCCE-EESSCBCCCSSSEEEEEETTEEEEEESSCCTT------TCSEEEEECSSC---EEEEEEEECC
T ss_pred CcEEE-EECCEEccCCCCEEEEECCCEEEEEECCCCcc------cCEEEEEEEccC---CcEEEEEEeC
Confidence 57899 89998886433333333333 6999999766 999999999993 2234455543
No 280
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.83 E-value=2.1e-08 Score=59.97 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=41.9
Q ss_pred CcEEEEEccCCeeeeccccceEEee--CCeEEecC-CCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALS--NGSLMFPP-FPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~--~~~l~i~~-v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.++| +++|..+........... .+.|.|.+ +..+ |+|.|+|.|.|..|.... ..|.|
T Consensus 133 ~p~i~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~------d~G~Y~C~a~N~~g~~~~~~~l~V 195 (197)
T 2j8h_A 133 DPVITW-QKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERK------DAGFYVVCAKNRFGIDQKTVELDV 195 (197)
T ss_dssp CCEEEE-EESSCEECSSSSCEEEECSSEEEEECTTCCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCcEEE-EECCEEeecCCCEEEEEcCCceEEEEeCCCCcc------cCEeEEEEEEeCCCcEeEEEEEEE
Confidence 378999 889988864333333222 23788988 8665 999999999999987653 44444
No 281
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.83 E-value=1.6e-08 Score=61.39 Aligned_cols=60 Identities=27% Similarity=0.386 Sum_probs=46.7
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
.|.|+| +++|..+... ..+....++.|.|.++..+ |+|.|+|.|.|..|...+ ..|.|..
T Consensus 139 ~p~i~W-~~~~~~~~~~-~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 139 TPNIYW-IKNQTKVDMS-NPRYSLKDGFLQIENSREE------DQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp CCEEEE-EETTEECCTT-STTEEEETTEEEECSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCeEEE-EECCeEcccC-CCeEEccCCeEEEccCChh------hCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 368999 8999888642 2244566789999999766 999999999999998864 5666654
No 282
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.82 E-value=1.2e-08 Score=55.56 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=39.1
Q ss_pred cEEEEEccCCeeeecccc--ceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKD--LRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~--~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~ 68 (116)
|.|.| +++|..+..... .+....+ ..|.|.++..+ |+|.|+|.+.|. ..+..|.|..
T Consensus 36 ~~v~W-~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~---~~~~~l~V~~ 96 (103)
T 1x44_A 36 ANVKW-FKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKA------DAAEYSVMTTGG---QSSAKLSVDL 96 (103)
T ss_dssp CCCEE-EETTEECCCSTTCSEEEEEETTEEEEEEEEECTT------TCSEEEEEETTE---EEEEEEEEEC
T ss_pred CeEEE-EECCEECCCCCceEEEEEEcCCEEEEEECCCCcc------cCEEEEEEECCC---cEEEEEEEeC
Confidence 67899 999998875442 2333333 37999999766 999999999982 2234455543
No 283
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.82 E-value=1e-08 Score=56.21 Aligned_cols=57 Identities=14% Similarity=0.202 Sum_probs=37.5
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~ 68 (116)
|.|+| ++++..+....+......+. .|.|.++..+ |+|.|+|.+.|. .....|.|..
T Consensus 36 p~v~W-~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~---~~~~~l~V~~ 94 (108)
T 2dm7_A 36 APVEW-KKGPETLRDGGRYSLKQDGTRCELQIHDLSVA------DAGEYSCMCGQE---RTSATLTVRA 94 (108)
T ss_dssp CCCEE-ESSSSBCCSSSSCEEEEETTEEEEEESSCCTT------TCSEEEEEETTE---EEEEECEEEC
T ss_pred CeeEE-EECCEECCCCCCEEEEecCCEEEEEECCCCcc------cCEEEEEEEcCC---EEEEEEEEec
Confidence 67899 88888876433333332332 4999999766 999999999653 1234455544
No 284
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.82 E-value=1.1e-08 Score=55.87 Aligned_cols=52 Identities=19% Similarity=0.269 Sum_probs=37.5
Q ss_pred cEEEEEccCCeeeecccc---ceEEe-------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 2 YVLLWLIRDNTVIAYVKD---LRIAL-------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~---~~~~~-------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
|.+.| +++|..+..... .+... ..+.|.|.++..+ |+|.|+|.+.|..|...
T Consensus 42 ~~i~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~g~~~ 103 (112)
T 3so5_A 42 MTFAW-XXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFT------SEGXYQCVISNHFGSSY 103 (112)
T ss_dssp CEEEE-EETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGG------GCEEEEEEEEETTEEEE
T ss_pred EEEEE-ccCCcccccccccceeeeeccCCCccccceEEEEeccccc------cCCeEEEEEEeCCCcEE
Confidence 68999 899888753211 11111 1357999999766 99999999999998754
No 285
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.82 E-value=2.9e-08 Score=53.22 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=33.1
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRA 52 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a 52 (116)
|.|.| +++|..+....+......+. .|.|.++..+ |+|.|+|.+
T Consensus 37 ~~v~W-~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a 82 (95)
T 2k1m_A 37 VKVRW-QRGGSDISASNKYGLATEGTRHTLTVREVGPA------DQGSYAVIA 82 (95)
T ss_dssp CCCEE-ECSSSEECSSTTCEEEEETTEEEEEESSCCTT------CCSEEEEEE
T ss_pred CeEEE-EECCEECCCCCcEEEEEcCCEEEEEEcCCCcc------cCEEEEEEE
Confidence 67899 89998886544433333333 6999999766 999999999
No 286
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.81 E-value=1.9e-08 Score=54.42 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=33.4
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRA 52 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a 52 (116)
.|.|.| +++|..+....+.+....+. .|.|.++..+ |+|.|+|.|
T Consensus 36 ~~~v~W-~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a 82 (100)
T 2yuv_A 36 KLEVKW-YKNGQEIRPSTKYIFEHKGCQRILFINNCQMT------DDSEYYVTA 82 (100)
T ss_dssp TSCEEE-EESSCBCCCBTTEEEEEETTEEEEEEEEECTT------TCCEEEEEE
T ss_pred CceEEE-EECCEECCCCCCEEEEecCCEEEEEEcCCCcC------cCEEEEEEE
Confidence 378999 89998886543433333333 5999999766 999999999
No 287
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.81 E-value=2.5e-09 Score=65.19 Aligned_cols=51 Identities=20% Similarity=0.266 Sum_probs=40.2
Q ss_pred cEEEEEccCCeeeeccc-cceEEeeCCeEEecCC-CCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 2 YVLLWLIRDNTVIAYVK-DLRIALSNGSLMFPPF-PETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~-~~~~~~~~~~l~i~~v-~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
|.|+| +++|..+.... .......++.|.|.++ ..+ |+|.|+|.|.|..|..
T Consensus 141 p~i~W-~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~------D~G~Y~C~A~N~~g~~ 193 (204)
T 1sy6_A 141 SEILW-QHNDKNIGGDEDDKNIGSDEDHLSLKEFSELE------QSGYYVCYPRGSKPED 193 (204)
T ss_dssp SCEEE-EETTEEESCCTTCTTEEEETTEEEETTCCHHH------HCEEEEEEETTSCGGG
T ss_pred CceEE-EECCEECCCccCCceEecCCCEEEEeeCCccc------cCEEEEEEeccCCCCc
Confidence 67999 89998886432 2223345789999999 877 9999999999999864
No 288
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.80 E-value=7.7e-09 Score=56.61 Aligned_cols=46 Identities=11% Similarity=0.142 Sum_probs=34.9
Q ss_pred EEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
.+.| +++|..+....+......+ ..|.|.++..+ |+|.|+|.+.|.
T Consensus 38 ~v~W-~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 38 TGKW-YKNGVEVRPSKRITISHVGRFHKLVIDDVRPE------DEGDYTFVPDGY 85 (106)
T ss_dssp EEEE-EESSCBCCCCSSCEEEEETTEEEEEESSCCTT------TCSCEEEEEETS
T ss_pred ceEE-EcCCEECcCCCCEEEEEeCCEEEEEECCCCcC------CCEEEEEEEccC
Confidence 3899 8999888654443333333 27999999766 999999999998
No 289
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.79 E-value=2.2e-08 Score=62.72 Aligned_cols=75 Identities=19% Similarity=0.273 Sum_probs=46.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC----CceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA----GVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDC 102 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~----g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C 102 (116)
.|.|.+++.+ |+|.|.|.+.+.. .... ...|.|... ... .|.+...+ ....+..|+.+.|.|
T Consensus 80 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~i~~~~-~~~~~~~g~~v~L~C 146 (253)
T 3liz_H 80 FLQMSSLKSE------DTAMYYCTRDPAGRAWFAYWGQGTLVTVSAA-----KTT-PPSVYPLA-PGSAAQTNSMVTLGC 146 (253)
T ss_dssp EEEECSCCGG------GCEEEEEEECCBTTTBCCEECCCEEEEECSS-----CCB-CCEEEEEC-C------CCEEEEEE
T ss_pred EEEECCCChh------hCEEEEEEEecCCcceeeEECCCEEEEEecc-----CCC-CCeEEEec-CCcccCCCCcEEEEE
Confidence 4999999766 9999999998862 1111 134444310 001 25554333 233456799999999
Q ss_pred eecC-cCCc-eeEEe
Q psy11568 103 AAQG-SPTP-KIEWL 115 (116)
Q Consensus 103 ~~~g-~P~p-~i~W~ 115 (116)
.+.| .|.| .++|+
T Consensus 147 ~~~g~~P~~~~v~W~ 161 (253)
T 3liz_H 147 LVKGYFPEPVTVTWN 161 (253)
T ss_dssp EEEEEBSSCCEEEEG
T ss_pred EEeeEeCCCeEEEEE
Confidence 9998 6777 89996
No 290
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.78 E-value=2.6e-08 Score=55.03 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=37.6
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~ 68 (116)
|.++| +++|.++....+......++ .|.|.++..+ |+|.|+|.+ |... ...|.|..
T Consensus 47 p~v~W-~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 47 APVEW-WKGHETLRDGDRHSLRQDGARCELQIRGLVAE------DAGEYLCMC----GKERTSAMLTVRA 105 (113)
T ss_dssp CCCEE-EESSSBCCCSSSEEEEEETTEEEEEECSCCST------TCEEEEEEE----TTEEEEEEEEECC
T ss_pred CcEEE-EECCEECCCCCcEEEEECCCEEEEEECCCChh------hCEEEEEEe----CCCCEEEEEEEeC
Confidence 67899 88998886433333333332 7999999766 999999999 3333 34455544
No 291
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.78 E-value=2.7e-08 Score=69.32 Aligned_cols=59 Identities=19% Similarity=0.243 Sum_probs=45.9
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|+| +++++++...........++ +|.|.++.++ |+|.|+|.|.|..|...+ ..|.|
T Consensus 511 ~P~v~W-~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~------D~G~Yt~~A~N~~G~~~~~v~l~V 572 (573)
T 3uto_A 511 PPVVTW-HKDDRELKQSVKYMKRYNGNDYGLTINRVKGD------DKGEYTVRAKNSYGTKEEIVFLNV 572 (573)
T ss_dssp CCEEEE-EETTEECCSSSSEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCeEEE-EECCEEcccCCcEEEEEcCCEEEEEEcCCCcc------cCcEEEEEEEeCCCcEEEEEEEEE
Confidence 489999 99999997644444444444 6889999766 999999999999998885 55544
No 292
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.78 E-value=2.1e-08 Score=66.35 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=57.6
Q ss_pred EEEEEccCCeeeecc-ccceEEee------CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeee
Q psy11568 3 VLLWLIRDNTVIAYV-KDLRIALS------NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSL 74 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~-~~~~~~~~------~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~ 74 (116)
.|+| ++++..+... ........ ...|.|..+..+ |+|.|+|.+.+..+... ...+.+...
T Consensus 203 ~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~------D~g~Y~C~~~~~~~~~~~~~~v~~~~~----- 270 (376)
T 2aty_A 203 QFSW-FVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWL------NGKEFKCRVNSAAFPAPIEKTISKTKG----- 270 (376)
T ss_pred EEEE-EECCccccCcccCCCCcccCCcEEEEEEEEechHhcc------CCCEEEEEEecCCCCCceEEEEcCCCC-----
Confidence 6999 6666554321 11111111 225888888655 99999999999876432 222211100
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecCc-C-CceeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-P-TPKIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P-~p~i~W~ 115 (116)
...+ |.+...+ .......|+.+.|.|.+.|. | .+.++|+
T Consensus 271 ~~~~-P~v~v~~-~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~ 311 (376)
T 2aty_A 271 RPKA-PQLYTIP-PPKEQMAKDKVSLTCMITDFFPEDITVEWQ 311 (376)
T ss_pred CCcC-CeEEeeC-CCHHHhcCCceEEEEEEEEeECCCcEEEEE
Confidence 0112 5555544 23333458999999999996 3 4588996
No 293
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.77 E-value=1.3e-08 Score=68.06 Aligned_cols=105 Identities=10% Similarity=0.178 Sum_probs=58.5
Q ss_pred EEEEEccCCeeeeccccceE-----EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCc-Eeee-
Q psy11568 3 VLLWLIRDNTVIAYVKDLRI-----ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGS-VVSL- 74 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~-----~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~-~~~~- 74 (116)
.|+| +++|..+........ ....+.|.|.++..+ | |.|+|.+.|..|... ...+.+.... .+..
T Consensus 152 ~v~W-~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~ 223 (434)
T 1igy_B 152 TVTW-NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRP------S-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCIC 223 (434)
T ss_dssp EEEE-TTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTT------S-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCC
T ss_pred EEEE-eeCCcCCCeEecCceecCCcEEEEEEEEEcchhcC------C-CcEEEEEEeCCCCccceeeccCCCCCCccccC
Confidence 8999 888875321000000 111235888888544 8 999999999988643 2222221000 0000
Q ss_pred -eccCCCceEecCCCeEE-EeCCCcEEEEeeecCcC----CceeEEeC
Q psy11568 75 -LDIQGPLFRIEPPYRFE-FSNESGGRLDCAAQGSP----TPKIEWLI 116 (116)
Q Consensus 75 -~~~~~p~~~~~~~~~~~-~~~g~~~~l~C~~~g~P----~p~i~W~~ 116 (116)
.... |.+...++.... +..|+.+.|.|.+.|.| .+.++|+.
T Consensus 224 ~~~~~-p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k 270 (434)
T 1igy_B 224 TVPEV-SSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFV 270 (434)
T ss_dssp CCSSS-CCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBS
T ss_pred CCCcC-cEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEe
Confidence 0000 333333322222 67899999999999984 35899973
No 294
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.77 E-value=2.1e-08 Score=63.72 Aligned_cols=80 Identities=18% Similarity=0.192 Sum_probs=49.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcC--------CCceE--EEEEEEEe-CcE----eeeeccCCCceEecCCCeEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNE--------AGVIL--SRFVHVKA-GSV----VSLLDIQGPLFRIEPPYRFEF 92 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~--------~g~~~--~~~~~v~~-~~~----~~~~~~~~p~~~~~~~~~~~~ 92 (116)
.|.|.++..+ |+|.|.|.+.+. ..... ...|.|.. +.. ......+.+.+...+ . ..+
T Consensus 80 sL~I~~v~~~------DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p-~-~~v 151 (280)
T 3fku_X 80 YMDLRSLRSE------DTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP-S-VSK 151 (280)
T ss_dssp EEEECSCCST------TCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS-E-EEE
T ss_pred EEEECCCChh------hCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC-c-EEE
Confidence 6999999766 999999999987 11111 12333332 000 000000113333333 4 888
Q ss_pred eCCCcEEEEeeecC-cC-CceeEEe
Q psy11568 93 SNESGGRLDCAAQG-SP-TPKIEWL 115 (116)
Q Consensus 93 ~~g~~~~l~C~~~g-~P-~p~i~W~ 115 (116)
.+|+++.|.|.+.+ .+ .+.+.|+
T Consensus 152 ~~G~~v~L~C~~~~~~~~~~~v~W~ 176 (280)
T 3fku_X 152 GLRQTATLTCTGNSNNVGNQGAAWL 176 (280)
T ss_dssp CTTCCEEEEEECCCCCCCTTCCEEE
T ss_pred ecCCCEEEEEEecCCCCCCceEEEE
Confidence 99999999999998 44 4889996
No 295
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.77 E-value=3.4e-08 Score=58.76 Aligned_cols=53 Identities=23% Similarity=0.415 Sum_probs=38.4
Q ss_pred CcEEEEEccCCeeeeccccceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
.|.++| +++|..+......++ ...++.|.|.++..+ |+|.|+|.|.|..|...
T Consensus 125 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~ 178 (189)
T 2v44_A 125 APAVSW-LYHNEEVTTISDNRFAMLANNNLQILNINKS------DEGIYRCEGRVEARGEI 178 (189)
T ss_dssp CCEEEE-EEEC--CEECCCTTEEECTTSCEEETTCCGG------GCEEEEEEEEETTTTEE
T ss_pred CCcEEE-EECCcEEeccCCCCEEEecCCcEEEEEcCcc------cCeEEEEEEEccccCce
Confidence 378999 888887764333333 345669999999766 99999999999986554
No 296
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.77 E-value=2.4e-08 Score=63.03 Aligned_cols=75 Identities=19% Similarity=0.299 Sum_probs=48.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce-E---EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEee
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-L---SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCA 103 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~---~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~ 103 (116)
.|.|.++..+ |+|.|.|.+.+..+.. . ...|.|... ... .|.+...++.. .+..|+.+.|.|.
T Consensus 86 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~-----~~~-~P~v~~~~p~~-~v~~g~~v~L~C~ 152 (261)
T 2xqy_G 86 YIQLSSLTSE------DSAVYYCGRLGYVYGFDYWGQGTTLTVSSA-----KTT-APSVYPLAPVC-GDTTGSSVTLGCL 152 (261)
T ss_dssp EEEECSCCGG------GCEEEEEEEECTTSSEEEECCCEEEEECSS-----CCB-CCEEEEECCCC-C--CCSEEEEEEE
T ss_pred EEEEcCCCcc------cCeEEEEEEecCCCcceEECCCEEEEEccC-----CCC-CCeEEEeCCCc-cccCCCcEEEEEE
Confidence 7999999766 9999999999975321 1 133444321 001 15444333222 3567999999999
Q ss_pred ecCc-CCc-eeEEe
Q psy11568 104 AQGS-PTP-KIEWL 115 (116)
Q Consensus 104 ~~g~-P~p-~i~W~ 115 (116)
+.+. |.| .++|+
T Consensus 153 ~~g~~P~~i~v~W~ 166 (261)
T 2xqy_G 153 VKGYFPEPVTLTWN 166 (261)
T ss_dssp EEEEBSSCCEEEEG
T ss_pred EEeEeCCCCEEEEe
Confidence 9985 777 99996
No 297
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=3.8e-09 Score=57.88 Aligned_cols=57 Identities=5% Similarity=0.030 Sum_probs=39.3
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~ 68 (116)
|.+.| ++||.++....+.+....+. .|.|.++..+ |+|.|+|.+.|.. .+..|.|..
T Consensus 39 ~~v~W-~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~~~~---~~a~L~V~~ 97 (104)
T 2eny_A 39 DPAMW-TVGGKTVGSSSRFQATRQGRKYILVVREAAPS------DAGEVVFSVRGLT---SKASLIVRE 97 (104)
T ss_dssp SCBCC-BSSSSBCSBCSSCEEEEETTEEEEEECSCCTT------TCSCEEEEETTEE---EEECEEEEC
T ss_pred ceeEE-EECCEECCCCCCEEEEEcCCEEEEEECCCCHH------HCEEEEEEECCee---EEEEEEEeC
Confidence 35899 99999887544444444443 6999999766 9999999986632 234455544
No 298
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.77 E-value=4.3e-09 Score=63.16 Aligned_cols=47 Identities=13% Similarity=0.360 Sum_probs=37.7
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
.|.|+| ++||.++..... .++.|.|.++..+ |+|.|+|.|.|..|..
T Consensus 133 ~p~i~W-~k~g~~i~~~~~-----~~~~L~i~~v~~~------D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 133 DKTIKW-LKDGSIISPLNA-----TKNTWNLGNNAKD------PRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSCEEE-EETTEECCCSSC-----CSSCCEEEETTSC------CEEEEEEEESSCEEEE
T ss_pred CCeEEE-EECCEECcccCC-----CcceEEECCCCcC------cCEEEEEEEEcCcCCc
Confidence 478999 999998863221 4568999999766 9999999999998755
No 299
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.76 E-value=3.7e-08 Score=58.64 Aligned_cols=60 Identities=23% Similarity=0.362 Sum_probs=43.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
.|.++| +++|..+..... .....++.|.|.++..+ |+|.|+|.+.|..|...+ ..|.|..
T Consensus 129 ~~~v~W-~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 129 KPSVSW-IKGDSALRENSR-IAVLESGSLRIHNVQKE------DAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp CCEEEE-EETTEECCCCSS-EEECTTSCEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CceEEE-EeCCEEccCCCc-EEEecCCcEEEecCChh------hCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 368999 889988764222 22345668999999766 999999999999987754 4454443
No 300
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.75 E-value=5.7e-08 Score=58.99 Aligned_cols=54 Identities=24% Similarity=0.449 Sum_probs=40.9
Q ss_pred CcEEEEEccCCeeeecc------ccceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYV------KDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~------~~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++|.++... ...+. ...++.|.|.++..+ |+|.|+|.|.|..|...+
T Consensus 138 ~~~v~W-~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 138 EPTLIW-IKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPI------DEGNYKCIAQNLVGTRES 198 (217)
T ss_dssp CCEEEE-EETTEEECCCCCC---CCCSEEEETTTEEEESSCCST------TCEEEEEEEEETTEEEEC
T ss_pred CCeEEE-EECCcCCCcccccccccCCcEEecCCCcEEEeeCCHH------HCeEEEEEEEcccceecc
Confidence 378999 8999988631 11122 334568999999766 999999999999988774
No 301
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.75 E-value=4.2e-08 Score=58.39 Aligned_cols=53 Identities=25% Similarity=0.364 Sum_probs=39.9
Q ss_pred CcEEEEEccCCeeeeccccceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
.|.+.| +++|..+......+. ...++.|.|.++..+ |+|.|+|.|.|..+...
T Consensus 129 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~~~~~ 182 (191)
T 1epf_A 129 PPTIIW-KHKGRDVILKKDVRFIVLSNNYLQIRGIKKT------DEGTYRCEGRILARGEI 182 (191)
T ss_dssp CCEEEE-EETTEEGGGGCCTTEEECTTSCEEETTCCGG------GCEEEEEEEEEGGGTEE
T ss_pred CCEEEE-EECCEEeeccCCceEEEecCCeEEECCCChh------hCEEEEEEEEEecceeE
Confidence 378999 889988864333333 345668999999766 99999999999985443
No 302
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.75 E-value=1.2e-08 Score=56.00 Aligned_cols=46 Identities=11% Similarity=0.289 Sum_probs=34.1
Q ss_pred cEEEEEccCCeeeecc-ccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEc
Q psy11568 2 YVLLWLIRDNTVIAYV-KDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASN 54 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~-~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n 54 (116)
|.|.| +++|+++... ........++ .|.|.++..+ |+|.|+|.+.+
T Consensus 45 ~~v~W-~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~~ 93 (104)
T 1pd6_A 45 AEVKW-LKNGQEIQMSGSKYIFESIGAKRTLTISQCSLA------DDAAYQCVVGG 93 (104)
T ss_dssp SCCEE-EESSSEECCCSSSSEEEEETTEEEEEECSCSSS------SCEEEEEEETT
T ss_pred CEEEE-EECCEECCCCCCeEEEEecCCEEEEEECCCCcc------cCEEEEEEECC
Confidence 67899 8999988653 3333333333 7999999766 99999999955
No 303
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.74 E-value=3.3e-08 Score=66.97 Aligned_cols=59 Identities=20% Similarity=0.336 Sum_probs=41.0
Q ss_pred CcEEEEEccCCeeeecc-ccceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYV-KDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~-~~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|+| +++|..+... ...++ ...+++|.|.++.++ |+|.|+|.|.|..|.... ..+.|
T Consensus 414 ~p~i~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~N~~g~~~~~~~l~V 475 (477)
T 2id5_A 414 PPAILW-LSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQ------DNGTYLCIAANAGGNDSMPAHLHV 475 (477)
T ss_dssp CCEEEE-ECTTSCBC-------CEECTTSCEEESSCCST------TCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEE-EECCccccccCCCceEEeCCCCEEEEeeCChH------HCEEEEEEEEeCCCcEEEEEEEEE
Confidence 489999 8887766431 12233 334678999999766 999999999999988764 44444
No 304
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.74 E-value=1.7e-08 Score=61.61 Aligned_cols=54 Identities=17% Similarity=0.207 Sum_probs=32.2
Q ss_pred CcEEEEEccCCeee-ec-cccceE-EeeCCeEEe---cCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVI-AY-VKDLRI-ALSNGSLMF---PPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~-~~-~~~~~~-~~~~~~l~i---~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+| ++++..+ .. ..+.++ ...+++|.| .++..+ |+|.|+|.|.|..|.+..
T Consensus 135 ~P~v~W-~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~------D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 135 HPHVQW-LMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKP------WHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CCEEEE-CCC------------CCEECTTSCEEEEEEEEECSS------CCCCEEEEEESSSCEEEE
T ss_pred CCEEEE-EECCeeecCcccccceEEEeCCCCEEEEEECCCCHH------HCEEEEEEEEcCCCEEEE
Confidence 489999 5554333 22 122233 334555544 577555 999999999999998775
No 305
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.74 E-value=1.4e-07 Score=56.17 Aligned_cols=59 Identities=15% Similarity=0.269 Sum_probs=40.5
Q ss_pred CcEEEEEcc--CCeeeecc-ccceEEe-e-CC--eEEecCCC-CCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIR--DNTVIAYV-KDLRIAL-S-NG--SLMFPPFP-ETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~--~g~~~~~~-~~~~~~~-~-~~--~l~i~~v~-~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.++| ++ +|.++... ...++.. . ++ .|.|.++. .+ |+|.|+|.|.|..|.... ..|.|
T Consensus 121 ~p~i~W-~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~------d~G~Y~C~a~N~~g~~~~~~~l~V 188 (190)
T 2wv3_A 121 HPEWMW-RKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITE------DPGEYECNATNSIGSASVSTVLRV 188 (190)
T ss_dssp CCEEEE-EEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTT------SCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCceEE-EEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccC------CCEEEEEEEEecCCcceeEEEEEE
Confidence 378999 66 78777531 1223322 2 22 69999997 45 999999999999997764 44444
No 306
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.73 E-value=2.6e-08 Score=61.56 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=47.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcC--CC-ceE--EEEEEEEeC-cEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNE--AG-VIL--SRFVHVKAG-SVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~--~g-~~~--~~~~~v~~~-~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.+. .. ... ...|.|... ..+.....+.+.+ ..+ ....+..|+.+.|.
T Consensus 80 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v-~~p-~~~~v~~g~~~~L~ 151 (230)
T 1ypz_F 80 ILTIYSLEEE------DEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTI-FLP-SVAETNLHKTGTYL 151 (230)
T ss_dssp EEEECSCCGG------GCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCE-ECC-CHHHHHHHSCEEEE
T ss_pred EEEECcCChh------hCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceE-ECC-CchhhccCCcceEE
Confidence 6999999766 999999999985 11 111 134555420 0000000011222 222 33334458899999
Q ss_pred eeecCc-CC-ceeEEe
Q psy11568 102 CAAQGS-PT-PKIEWL 115 (116)
Q Consensus 102 C~~~g~-P~-p~i~W~ 115 (116)
|.+.|. |. +.++|+
T Consensus 152 C~~~g~~P~~~~v~W~ 167 (230)
T 1ypz_F 152 CLLEAFFPDVIRVYWK 167 (230)
T ss_dssp EEEEEESSCCCEEEEE
T ss_pred EEEeeecCCCeEEEEE
Confidence 999986 75 599997
No 307
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=1.1e-08 Score=55.55 Aligned_cols=47 Identities=15% Similarity=0.364 Sum_probs=34.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
|.|+| +++|..+....+......+ ..|.|.++..+ |+|.|+|.+.+.
T Consensus 40 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~~~ 88 (102)
T 2eo1_A 40 TEVTW-YKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQA------EAGEYSCEAGGQ 88 (102)
T ss_dssp SCCEE-EETTEECCCCSSEEEEEETTEEEEEETTCCTT------TCSCEEEEETTE
T ss_pred CceEE-EECCEECCCCCCEEEEEcCCEEEEEECCCCcc------cCEEEEEEcCCC
Confidence 67899 9999988654333333333 37999999766 999999999654
No 308
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.73 E-value=4.5e-08 Score=58.36 Aligned_cols=59 Identities=17% Similarity=0.336 Sum_probs=42.1
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC--CeEEecCCCC-CCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPE-TGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~-~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.++| +++|..+...........+ +.|.|.++.+ + |+|.|+|.|.|..|.... ..|.|
T Consensus 132 ~p~v~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 132 VPAMTW-FHGQKLLQNSENITIENTEHYTHLVMKNVQRKT------HAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp CCEEEE-EETTEECCCCSSEEEEECSSEEEEEESSCCHHH------HCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCeeEE-eECCEECCCCCceEEEEcCCEEEEEEccccchh------hCceEEEEEEcCcCceEEEEEEEE
Confidence 478999 8899988643333222222 4799999963 4 999999999999987764 44444
No 309
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.72 E-value=4e-09 Score=59.17 Aligned_cols=53 Identities=19% Similarity=0.273 Sum_probs=38.0
Q ss_pred cE-EEEEccCCeeeeccccceEEe----eCC----eEEecCCCCCCCCCCCCc-eEEEEEEEcCCCceEE
Q psy11568 2 YV-LLWLIRDNTVIAYVKDLRIAL----SNG----SLMFPPFPETGFRPDVHS-TVYRCRASNEAGVILS 61 (116)
Q Consensus 2 p~-v~W~~~~g~~~~~~~~~~~~~----~~~----~l~i~~v~~~~~~~~~d~-G~y~C~a~n~~g~~~~ 61 (116)
|. |+| ++++..+......++.. .++ .|.|.++..+ |. |.|+|.|.|..|....
T Consensus 43 p~~i~W-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~~G~Y~C~a~N~~G~~~~ 105 (122)
T 2cry_A 43 PDRIAW-SWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRA------DFQTIYNCTAWNSFGSDTE 105 (122)
T ss_dssp CSEEEE-ESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH------HHHSCEEEEEECSSCEEEE
T ss_pred CcEeEE-EECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh------hCCceEEEEEECCCCeEEE
Confidence 44 999 88888876421122221 123 7999999765 98 9999999999998764
No 310
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=1.2e-08 Score=54.84 Aligned_cols=43 Identities=16% Similarity=0.403 Sum_probs=33.5
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
|.+.| +++|..+... .+..|.|.++..+ |+|.|+|.+.|..+.
T Consensus 40 ~~v~W-~k~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~ 82 (96)
T 2ens_A 40 PQIHW-MKDGVPLPLP-------PSPVLILPEIGPQ------DQGTYSCVATHSSHG 82 (96)
T ss_dssp CCCCC-EESSSBCSSC-------CCSEEEEESCCTT------TCEEEECEECCSSCC
T ss_pred CEEEE-EECCEECcCC-------CCCEEEECCCCcc------cCEEEEEEEEeCCCC
Confidence 67889 7888776531 3458999999766 999999999997543
No 311
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.72 E-value=6.6e-08 Score=57.15 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=36.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
|.+.| +++|.++.. ...++.|.|.++..+ |+|.|+|.|.|..+...+
T Consensus 119 ~~~~W-~k~g~~~~~------~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~s 165 (175)
T 1fnl_A 119 HKVTY-LQNGKDRKY------FHHNSDFHIPKATLK------DSGSYFCRGLVGSKNVSS 165 (175)
T ss_dssp EEEEE-EETTEEEEE------EEECCCEEESSCCGG------GCEEEEEEEEETTEEEEC
T ss_pred eEEEE-EECCeEccC------CCCCCEEEEcccChh------hCeEEEEEEEcCCCCccC
Confidence 48999 899988742 234678999999766 999999999998765443
No 312
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=9.5e-09 Score=55.76 Aligned_cols=47 Identities=11% Similarity=0.293 Sum_probs=34.5
Q ss_pred cEEEEEccCCeeeecccc----ceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 2 YVLLWLIRDNTVIAYVKD----LRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~----~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
|.+.| ++||.++..... ......++ .|.|.++..+ |+|.|+|.+.|.
T Consensus 37 ~~v~W-~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~------D~G~Y~C~a~n~ 89 (101)
T 2edk_A 37 AQVMW-MKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQE------DRGRYQVITNGG 89 (101)
T ss_dssp CCCEE-EESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGG------GCSBEEEECSSC
T ss_pred CEEEE-EECCEECCCCCCcceeEEEEECCCEEEEEECCCChh------hCEEEEEEEcCC
Confidence 67899 899988865432 23333333 5999999766 999999999983
No 313
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.71 E-value=9.6e-09 Score=62.00 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=36.5
Q ss_pred CcEEEEEccC--CeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRD--NTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~--g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++ +..+.. .......++.|.|.++..+ |+|.|+|.|.|..|....
T Consensus 151 ~~~v~W-~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~~~ 204 (214)
T 3jz7_A 151 PLQFEW-QKLSDSQTMPT--PWLAEMTSPVISVKNASSE------YSGTYSCTVQNRVGSDQC 204 (214)
T ss_dssp SCEEEE-EECSTTCCCCG--GGGGGTTSSEEEECSCCGG------GCEEEEEEEECSSCEEEE
T ss_pred CCEEEE-EECCCCCccCc--cceeccCCCEEEEecCCHH------HCEEEEEEEEcCCCcEEE
Confidence 378999 663 333321 1112234568999999766 999999999999987764
No 314
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.69 E-value=9.8e-08 Score=57.96 Aligned_cols=60 Identities=28% Similarity=0.374 Sum_probs=40.6
Q ss_pred CcEEEEEccCCeeeeccc-cceEE-e-e--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVK-DLRIA-L-S--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~-~~~~~-~-~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~ 67 (116)
.|.++| +++|.++.... ..++. . . .+.|.|.++..+ |+|.|+|.|.|..|...+ ..+.+.
T Consensus 137 ~p~v~W-~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 137 DPEITW-FKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEES------DQGKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp CCEEEE-EETTEEC------CCEEEEEETTEEEEEECSCCGG------GCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCeEEE-EECCccccCcCCCceEEEEecCCeEEEEEcCCCcc------cCEEEEEEEECCCCccccccccEEEE
Confidence 378999 89998886421 11221 1 1 247999999766 999999999999998774 444443
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.69 E-value=1.3e-07 Score=63.63 Aligned_cols=62 Identities=26% Similarity=0.478 Sum_probs=43.1
Q ss_pred CcEEEEEccCCeeeeccc-cceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVK-DLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~-~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|+|++.+|..+.... ..++ ...+++|.|.++..+ |+|.|+|.|.|..|...+ ..+.|..
T Consensus 369 ~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~~~~~~~v~~ 433 (440)
T 3zyj_A 369 LTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQ------DTGMYTCMVSNSVGNTTASATLNVTG 433 (440)
T ss_dssp TSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCST------TCEEEEEEEECSSCEEEEEEEEEEC-
T ss_pred CCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChh------hCEEEEEEEEcCCCcEEEEEEEEEec
Confidence 488999444665554321 1233 345678999999766 999999999999998774 5555543
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.69 E-value=7.3e-08 Score=65.05 Aligned_cols=62 Identities=29% Similarity=0.528 Sum_probs=43.0
Q ss_pred CcEEEEEccCCeeeeccc-cceE-EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVK-DLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~-~~~~-~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|+|++.+|..+.... ..++ ...+++|.|.++..+ |+|.|+|.|.|..|.... ..+.|..
T Consensus 379 ~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~------D~G~Y~C~a~N~~G~~~~~~~l~v~~ 443 (452)
T 3zyi_A 379 MSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLS------DTGVYTCMVTNVAGNSNASAYLNVST 443 (452)
T ss_dssp TSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTT------CCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred CCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHH------HCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 489999544666654321 2233 345678999999766 999999999999998774 5555543
No 317
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.68 E-value=7.2e-08 Score=52.46 Aligned_cols=58 Identities=21% Similarity=0.292 Sum_probs=36.6
Q ss_pred cEEEEEccCCe-eeecc-----ccceEEe-----eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 2 YVLLWLIRDNT-VIAYV-----KDLRIAL-----SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 2 p~v~W~~~~g~-~~~~~-----~~~~~~~-----~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
|.|.| ++++. .+... ...++.. .+..|.|.++..+ |+|.|+|.+.| .|.... ..|.|.
T Consensus 36 ~~v~W-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 36 TSLQW-SNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLS------DEGQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp CCEEE-ECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGG------GCEEEEEEECS-SSCEEEEEEEEEE
T ss_pred cEEEE-EcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChh------HCeEEEEEEEc-CCCcEEEEEEEEE
Confidence 67999 66654 33211 1113322 2347999999766 99999999999 665553 445444
No 318
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.68 E-value=1.7e-07 Score=57.16 Aligned_cols=69 Identities=17% Similarity=0.194 Sum_probs=41.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC---------ce-E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG---------VI-L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNE 95 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g---------~~-~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 95 (116)
.|.|.++..+ |+|.|.|.+.+..+ .. . ...|.|... ......| ...+..
T Consensus 72 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~----------~~~~~~P--~v~~~~- 132 (207)
T 1ypz_E 72 TLHIRDAQLE------DSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPK----------SQPPAKP--SVFIMK- 132 (207)
T ss_dssp EEEECSCCGG------GCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECC----------CCCCCCC--EEEEEE-
T ss_pred EEEECCCCHH------HCEEEEEEEecCCcccccccccceeeecCccEEEEccC----------CCCCCCC--eEEEeC-
Confidence 6999999766 99999999988642 11 1 134444431 0000011 111221
Q ss_pred CcEEEEeeecCc-CC-ceeEEe
Q psy11568 96 SGGRLDCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 96 ~~~~l~C~~~g~-P~-p~i~W~ 115 (116)
..+.|.|.+.|. |. |.++|+
T Consensus 133 ~~~~l~C~~~g~~P~~~~v~W~ 154 (207)
T 1ypz_E 133 NGTNVACLVKDFYPKEVTISLR 154 (207)
T ss_dssp ETTEEEEEEEEESSSCCEEEEE
T ss_pred CCCeEEEEEeeEeCCCeEEEEe
Confidence 237999999885 44 799997
No 319
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.5e-08 Score=55.39 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=37.6
Q ss_pred cEEEEEccCCeeeeccccceEEee-C--CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALS-N--GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAG 69 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~-~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~ 69 (116)
|.|+| ++||.++....+...... + ..|.|.++..+ |+|.|+|.+ |... +..|.|...
T Consensus 43 p~v~W-~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~----g~~~~~~~L~V~~~ 103 (115)
T 2cr6_A 43 EPVHW-FLDKTPLHANELNEIDAQPGGYHVLTLRQLALK------DSGTIYFEA----GDQRASAALRVTEK 103 (115)
T ss_dssp CSCEE-EESSCEECCSSSCCBCCBTTTBCCBEECSCCTT------TCEEEEEEE----TTEECCEEEEEECC
T ss_pred CccEE-EECCEECCCCCcEEEEEcCCCEEEEEEcCCChh------hCEEEEEEE----CCeeEEEEEEEECC
Confidence 68999 899988865333222212 2 27999999766 999999994 3333 255556543
No 320
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.67 E-value=1e-07 Score=57.92 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=39.6
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
|.++| ++||..+.. ...++.|.|.++..+ |+|.|+|.|.|..+...+ ..|.|..
T Consensus 119 ~~v~W-~k~g~~~~~------~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (204)
T 3sgj_C 119 HKVTY-LQNGKGRKY------FHHNSDFYIPKATLK------DSGSYFCRGLVGSKNVSSETVQITITQ 174 (204)
T ss_dssp EEEEE-EETTEEEEE------EEECCCEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ceEEE-EECCcEeec------ccCCceEEECcCCcc------cCEEEEEEEEeCCCceecCcEEEEEeC
Confidence 67999 899987642 224668999999766 999999999996544443 4555553
No 321
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.66 E-value=6.6e-08 Score=63.08 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=40.0
Q ss_pred CcEEEEEccCCeeeeccccceEEe---------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIAL---------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~---------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+| +++|..+.......... .++.|.|.++..+ |+|.|+|.|.|..|....
T Consensus 275 ~p~i~W-~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~N~~G~~~~ 337 (347)
T 2ifg_A 275 APSLRW-LFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHV------NNGNYTLLAANPFGQASA 337 (347)
T ss_dssp CCEEEE-EETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGG------GCEEEEEEEEETTEEEEE
T ss_pred CCcEEE-EeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcc------cCceEEEEEecCCCceee
Confidence 478999 89999887432222211 1346999999766 999999999999987664
No 322
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.66 E-value=3.8e-08 Score=61.30 Aligned_cols=60 Identities=17% Similarity=0.339 Sum_probs=29.7
Q ss_pred CCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcC-----CceeEEe
Q psy11568 42 DVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSP-----TPKIEWL 115 (116)
Q Consensus 42 ~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P-----~p~i~W~ 115 (116)
..|+|.|+|.|. |.... ..+.+.. .+.+...+ ....+.+|+++.|.|.+.+.| .|.++|+
T Consensus 13 ~~dsg~Y~C~a~---g~~~~~~~~~~~~----------~~~~~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~ 78 (254)
T 2c1o_A 13 PGTSVKLSCKAS---GYSFTNYWMNWLR----------ELVMTQSP-LTLSVTIGQPASISCKSSQSLLYSNGKTYLNWL 78 (254)
T ss_dssp --------------------------------------CCCEEEEC-SEEEECTTSCEEEEEEESSCCBCSSSCBCEEEE
T ss_pred CCccEEEEEcCc---hhhhhhhhhheee----------ceeEEeCC-ceEEecCCCcEEEEeeccCcccccCCCCceEEE
Confidence 449999999998 33332 1111111 15555555 788999999999999999998 4899997
No 323
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.65 E-value=5.3e-09 Score=55.11 Aligned_cols=39 Identities=18% Similarity=0.344 Sum_probs=30.7
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCC-CCCCCCCCCCceEEEEEEEc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPF-PETGFRPDVHSTVYRCRASN 54 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v-~~~~~~~~~d~G~y~C~a~n 54 (116)
|.|+| ++||.++... .++.|.|.++ ..+ |+|.|+|.|.+
T Consensus 27 P~i~W-~kdg~~l~~~-------~~~~L~I~~v~~~~------DsG~Y~C~A~t 66 (82)
T 3r08_E 27 ENLKW-EKNGQELPQK-------HDKHLVLQDFSEVE------DSGYYVCYTPA 66 (82)
T ss_dssp SSCEE-EETTEECTTC-------CSSCCBCCSCCTTT------TCSCEEEECSS
T ss_pred CcEEE-EECCEECcCC-------CCCEEEECccCccC------cCEEEEEEEcc
Confidence 45899 9999987531 4568999996 445 99999999986
No 324
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.64 E-value=5.5e-07 Score=59.07 Aligned_cols=54 Identities=22% Similarity=0.373 Sum_probs=39.7
Q ss_pred CcEEEEEccCCeeeeccc--cceEEee--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVK--DLRIALS--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~--~~~~~~~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++|..+.... +.+.... ...|.|.++..+ |+|.|+|.|.|..|...+
T Consensus 129 ~~~i~W-~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~G~~~~ 186 (389)
T 2jll_A 129 PASIHW-RRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDN------DFGRYNCTATNHIGTRFQ 186 (389)
T ss_dssp CCEEEE-EETTEESSCTTCTTEEEEECSSCEEEEECCCSTT------SSEEEEEEEEETTEEEEE
T ss_pred CCeEEE-EECCccCCcccCceEEEeccCCEEEEEECCCChh------hCEEEEEEEEcCCCcEEE
Confidence 378999 99999886533 2222222 226999999766 999999999999988664
No 325
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.64 E-value=7.4e-08 Score=56.42 Aligned_cols=47 Identities=13% Similarity=0.260 Sum_probs=36.9
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
|.+.| +++|..+.. ...++.|.|.++..+ |+|.|+|.+.|..|...+
T Consensus 116 ~~~~W-~~~g~~~~~------~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s 162 (170)
T 3ry4_A 116 VKVTF-FQNGKSQKF------SHLDPTFSIPQANHS------HSGDYHCTGNIGYTLFSS 162 (170)
T ss_dssp EEEEE-EETTEEEEE------ESSCCEEEESSCCGG------GCEEEEEEEEETTEEEEC
T ss_pred ceEEE-EECCeEccc------cCCCCeEEEEecccc------CCEEEEEEEEeCcCcccc
Confidence 68999 889887652 123558999999766 999999999999986544
No 326
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.62 E-value=2.6e-08 Score=62.37 Aligned_cols=99 Identities=20% Similarity=0.267 Sum_probs=52.9
Q ss_pred EEEEEccCCeeeeccccce-EEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCce-EEEEEEEEeCcEeee
Q psy11568 3 VLLWLIRDNTVIAYVKDLR-IALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKAGSVVSL 74 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~-~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~~~~~~v~~~~~~~~ 74 (116)
.|+| ++||+++....... ....++ .|.|..... .|.|.|+|.+.+..+.. ....+.+.. .
T Consensus 59 ~v~W-~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~------~d~~~YtC~v~h~~~~~~~~~~i~~~~-----~ 126 (240)
T 4acp_A 59 KFNW-YVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDW------LNGKEYKCKVSNKALPAPIEKTISKAK-----G 126 (240)
T ss_dssp EEEE-EETTEEECCCEECCCEEC---CEEEEEEEECCHHHH------HHTCCEEEEEECC----CEEEEECCCC-----S
T ss_pred EEEE-EECCcccCCceeccceECCCCeEEEEEEEEEechhc------cCCCEEEEEEEcCCCCccccccccccC-----C
Confidence 6999 89999875321100 111122 355544432 26899999999987532 222221100 0
Q ss_pred eccCCCceEecCCCeEEEeCCCcEEEEeeecC-cCCc-eeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG-SPTP-KIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g-~P~p-~i~W~ 115 (116)
... .|.+...++... ...|+.+.|.|.+.| .|.+ .++|+
T Consensus 127 ~~~-~P~V~v~~~~~~-~~~g~~~~L~C~~~gf~P~~i~v~W~ 167 (240)
T 4acp_A 127 QPR-EPQVYTLPPSRD-ELTKNQVSLTCLVKGFYPSDIAVEWE 167 (240)
T ss_dssp CCB-CCEEEEECCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCC-CCEEEEECCChH-HhcCCceEEEEEEeEEeCCCcEEEEE
Confidence 011 255554442221 134889999999999 4654 78996
No 327
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.62 E-value=1.1e-07 Score=59.41 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=28.9
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEE
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRL 100 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l 100 (116)
++.|.|.++..+ |+|.|+|.|.|..|.... ..|.|... .|.+...| ....+..|+.+..
T Consensus 200 ~~~L~i~~v~~~------D~G~Y~C~a~n~~g~~~~~~~l~V~~~---------~p~~~~~p-~~~~~~~~q~~~~ 259 (268)
T 3mj6_A 200 DGSIKLQTVKES------DQGIYTCSIYVGKLESRKTIVLHVVQD---------EFQRTISP-TPPTDKGQQGILN 259 (268)
T ss_dssp BCCEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEEECC-------------------------------
T ss_pred eEEEEECcCChh------hCeEEEEEEEcCCceEEEEEEEEEEcC---------CCeeeeCC-CCCCCCcceeccc
Confidence 457999999766 999999999998876653 55555432 15554554 5555555555443
No 328
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.62 E-value=1.2e-07 Score=58.49 Aligned_cols=75 Identities=13% Similarity=0.217 Sum_probs=42.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc-------eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV-------IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-------~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...+.|... ... .|.+...+ ....+..|+.+
T Consensus 84 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~-----~~~-~P~v~~~~-~~~~~~~g~~v 150 (232)
T 3qhz_H 84 VLTMTNMDPV------DTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSA-----STK-GPSVFPLA-PSSKSTSGGTA 150 (232)
T ss_dssp EEEECSCCGG------GCEEEEEEEECCC---CCCCCCEECCCEEEEECSS-----CCB-CCEEEEEC-C-------CEE
T ss_pred EEEECcCChh------hCEEEEEEEeeccCccccccceeeCCCeEEEEecC-----CCC-CCEEEEec-ccccccCCCcE
Confidence 5999999766 999999999976311 11 133444311 011 25554333 22345569999
Q ss_pred EEEeeecCcCCc--eeEEe
Q psy11568 99 RLDCAAQGSPTP--KIEWL 115 (116)
Q Consensus 99 ~l~C~~~g~P~p--~i~W~ 115 (116)
.|.|.+.+.+++ .++|+
T Consensus 151 ~L~C~~~~~~P~~~~v~W~ 169 (232)
T 3qhz_H 151 ALGCLVKDYFPEPVTVSWN 169 (232)
T ss_dssp EEEEEEEEEBSSCCEEEEG
T ss_pred EEEEEEeeEeCCCeEEEEE
Confidence 999999986543 46696
No 329
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.61 E-value=9.8e-09 Score=66.07 Aligned_cols=102 Identities=12% Similarity=0.188 Sum_probs=29.4
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccC--C
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQ--G 79 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~--~ 79 (116)
.|+| +++++++....... ......+.+...+ ..|.+.|+|.|.|..+... ...-.+..+..+.++-.+ .
T Consensus 120 ~itW-~kg~~~l~~~~~~~-~~~~~~l~~~~~~------~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~ 191 (291)
T 1mq8_A 120 TVVL-LRGEKELKREPAVG-EPAEVTTTVLVRR------DHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATP 191 (291)
T ss_dssp EEEE-ESSSSEEEEEECCB-TTEEEEEECCCSS------SCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------
T ss_pred EEEE-EECCEEeecccCCC-CCceEEEEeeeee------ccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCC
Confidence 6899 89998876321000 0011134443332 2366799999999755210 000001111112221110 0
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCc---eeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTP---KIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p---~i~W~~ 116 (116)
+.+ ..+ ..+.+|+.+.|.|.+.|.|++ .++|++
T Consensus 192 ~~~-~~p---~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~ 227 (291)
T 1mq8_A 192 PQL-VSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227 (291)
T ss_dssp ----------------------------------------
T ss_pred cee-cCC---cCccCCCeEEEEEEcCCCCCCcccEEEEEE
Confidence 111 112 256789999999999998654 478863
No 330
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.61 E-value=6.4e-08 Score=58.32 Aligned_cols=52 Identities=23% Similarity=0.453 Sum_probs=37.9
Q ss_pred CcEEEEEccCCe-eeecccc-------ceEEe--eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 1 MYVLLWLIRDNT-VIAYVKD-------LRIAL--SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 1 ~p~v~W~~~~g~-~~~~~~~-------~~~~~--~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
.|.++| +++|. ++..... .++.. .++.|.|.++..+ |+|.|+|.|.|..|..
T Consensus 134 ~~~i~W-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 134 PSEYSW-FKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAF------DSGEYYCQAQNGYGTA 195 (212)
T ss_dssp CCEEEE-EETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGG------GCEEEEEEEECSSSCC
T ss_pred CCEEEE-EeCCcccccccccccccccCceeEecCCCceEEEEecChh------hCcEEEEEEccccCCc
Confidence 378999 88888 7754221 12222 3558999999766 9999999999999987
No 331
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.61 E-value=1.4e-07 Score=57.52 Aligned_cols=60 Identities=17% Similarity=0.150 Sum_probs=39.6
Q ss_pred cEEEEEccCCeeeecccc-c-eE--------EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKD-L-RI--------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~-~-~~--------~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
+.+.| +++|..+..... . +. ....+.|.|.++..+ |+|.|+|.|.|..|.... ..|.|..
T Consensus 137 ~~i~W-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 137 IDFNW-EYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS------DQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp CEEEE-ECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGG------GCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred eEEEE-EecCCccceEEEeccccccccCccceeeeEEEEECCCCcc------cCEEEEEEEecCCCcEEEEEEEEEec
Confidence 47999 888776432111 0 00 111236999999766 999999999999987763 5555544
No 332
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=1.2e-07 Score=51.40 Aligned_cols=56 Identities=13% Similarity=0.188 Sum_probs=37.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~ 68 (116)
|.|+| ++++..+....+......++ .|.|.++..+ |+|.|+|. .|... ...|.|..
T Consensus 37 ~~v~W-~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~----~g~~~~~~~l~V~~ 95 (103)
T 2dku_A 37 ATVTW-RKGLLELRASGKHQPSQEGLTLRLTISALEKA------DSDTYTCD----IGQAQSRAQLLVQG 95 (103)
T ss_dssp SCCEE-EESSCBCCSSSSEEEEEETTEEEEEEESCCTT------TCSEEEEE----CSSCBCCEEEEEEC
T ss_pred CeEEE-EeCCEECCCCCeEEEEeCCCEEEEEECCCCcc------cCEEEEEE----eCCceEEEEEEEeC
Confidence 67899 89998876433333232233 7999999766 99999998 33333 24455543
No 333
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.60 E-value=2.1e-07 Score=52.29 Aligned_cols=35 Identities=26% Similarity=0.270 Sum_probs=27.7
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.+|.|.++..+ |+|.|.|.+.|. |.... ..|.|..
T Consensus 66 ~~L~I~~v~~~------DsG~Y~C~a~n~-g~~~~~~~l~V~~ 101 (124)
T 3rbg_A 66 LSITVPNVTLQ------DEGVYKCLHYSD-SVSTKEVKVIVLA 101 (124)
T ss_dssp EEEEESSCCGG------GCEEEEEEEESS-SEEEEEEEEEEEC
T ss_pred EEEEECCCChH------HCEEEEEEEEcC-CCCcEEEEEEEEe
Confidence 47999999766 999999999999 66553 5566654
No 334
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=98.60 E-value=1.9e-07 Score=62.41 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=50.9
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCC-cEEEEee
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNES-GGRLDCA 103 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~-~~~l~C~ 103 (116)
+.+|.|.++..+ |+|.|.|.+.+..+.... ..+.|..+ |.+...+.....+..|+ .+.|.|.
T Consensus 253 ~~sL~I~~v~~~------D~G~Y~C~v~~~~~~~~~~v~L~V~~p----------P~V~v~p~~~~~~~~G~~~vtL~C~ 316 (401)
T 3f8u_B 253 NGTFWLPRVQPF------QEGTYLATIHLPYLQGQVTLELAVYKP----------PKVSLMPATLARAAPGEAPPELLCL 316 (401)
T ss_dssp EEEEEETTCCGG------GCEEEEEEEEETTEEEEEEEEEEEEBC----------CEEEEESSSCCCCCTTCCCCCEEEE
T ss_pred cEEEEECcCCHh------hCceEEEEEEecccceeEEEEEeeccC----------CeEeeccCcceeecCCCccEEEEEE
Confidence 347999999766 999999999998765443 44555443 55544432211134576 7999999
Q ss_pred ecCc-CC--ceeEEe
Q psy11568 104 AQGS-PT--PKIEWL 115 (116)
Q Consensus 104 ~~g~-P~--p~i~W~ 115 (116)
+.|. |. +.++|+
T Consensus 317 a~GfyP~~~~~VtW~ 331 (401)
T 3f8u_B 317 VSHFYPSGGLEVEWE 331 (401)
T ss_dssp EEEEBSSTTCEEEEE
T ss_pred ecCCcCCCCcEEEEE
Confidence 9996 55 789994
No 335
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.59 E-value=2.3e-07 Score=55.04 Aligned_cols=53 Identities=9% Similarity=-0.034 Sum_probs=39.6
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.++| +++|..+ ...++.|.|.++..+ |+|.|+|.|.|..+.... ..|.|..
T Consensus 126 ~~~v~W-~~~~~~~--------~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 126 SPSVQC-RSPRGKN--------IQGGKTLSVSQLELQ------DSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp CCEEEE-ECTTSCE--------EEESSEEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCEEEE-EeCCCcc--------ccCceEEEEecCCcC------CCeEEEEEEEECCceEEEEEEEEEEe
Confidence 478999 7776544 235678999999766 999999999998876663 5555543
No 336
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.59 E-value=1.9e-07 Score=55.15 Aligned_cols=54 Identities=17% Similarity=0.205 Sum_probs=39.0
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~~ 68 (116)
|.+.| +++|..+... ..++.|.|.++..+ |+|.|+|.|.|..+...+ ..|.|..
T Consensus 116 ~~~~W-~~~g~~~~~~------~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 116 YKVIY-YKDGEALKYW------YENHNISITNATVE------DSGTYYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp EEEEE-EETTEECCSC------CCSSEEEESSCCGG------GCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred eEEEE-EECCEEEeee------cCCCeEEECCCCcc------cCEEEEEEEEeCCcceEecCEEEEEec
Confidence 58999 8899877421 13568999999766 999999999998554443 4444443
No 337
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.59 E-value=5.9e-08 Score=58.42 Aligned_cols=53 Identities=9% Similarity=0.104 Sum_probs=36.6
Q ss_pred CcEEEEEccCCeeeeccccce---EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLR---IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~---~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
+|.|+| ++++..+....... .....+.|.|.++..+ |+|.|+|.|.|..|...
T Consensus 147 ~p~i~W-~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~YtC~a~N~~g~~~ 202 (218)
T 4frw_A 147 APSVTW-DTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSM------NGQPLTCVVSHPGLLQD 202 (218)
T ss_dssp CCEEEE-EESSCCEEEEEEEECSSSEEEEEEEEECCCGGG------TTCEEEEEEECTTCSSC
T ss_pred CceEEE-EECCcccccCceEecCCcEEEEEEEEEeeCCHH------hCeEEEEEEEeCCCCeE
Confidence 478999 88887775321110 0111236889988766 99999999999988665
No 338
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.59 E-value=2.5e-08 Score=62.95 Aligned_cols=95 Identities=18% Similarity=0.089 Sum_probs=34.9
Q ss_pred cEEEEEccCCeeeeccccceEEe---eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC----ceEE--EEEEEEeCcEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIAL---SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG----VILS--RFVHVKAGSVV 72 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~---~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g----~~~~--~~~~v~~~~~~ 72 (116)
+.+.| +++|+.+.......... .++.|.|.+++ |+|.|+|.|.+... ...+ ..|.|...
T Consensus 135 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--------D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~--- 202 (257)
T 1b6u_A 135 DMYHL-SREGEAHERRFSAGPKVNGTFQADFPLGPAT--------HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGN--- 202 (257)
T ss_dssp SEEEE-EETTSSCEECCBCBCCSSSCCBEEEEEEECC--------SCEEEEEEEECSSCTTBBCCCCCCEEECCBCC---
T ss_pred cEEEE-EECCcccCcccccccccCCceeEEEEecccc--------cCEEEEEEEEcCCCCcccccCCCCEEEEEecc---
Confidence 57899 88887765321111111 13478999883 89999999997632 1222 33333332
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...++.......|..+.|.|.+ |.+.+.|.|.+
T Consensus 203 -------p~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~ 238 (257)
T 1b6u_A 203 -------PSNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLN 238 (257)
T ss_dssp -------C------------------------------------
T ss_pred -------CCCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhh
Confidence 3333222233344568899999866 77888888864
No 339
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.58 E-value=3.2e-08 Score=56.48 Aligned_cols=29 Identities=24% Similarity=0.428 Sum_probs=25.0
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
++.|.|.++..+ |+|.|+|.|.|..|...
T Consensus 89 ~~~L~I~~v~~~------D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 89 ASTISIDTLVEE------DTGTYECRASNDPDRNH 117 (137)
T ss_dssp EEEEEECSCCGG------GCEEEEEEEECCTTSSS
T ss_pred ceEEEECCCCcc------cCEEEEEEEEecCCccc
Confidence 347999999766 99999999999998764
No 340
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.58 E-value=1e-07 Score=58.94 Aligned_cols=52 Identities=13% Similarity=0.186 Sum_probs=36.7
Q ss_pred CcEEEEEccCCeeeecccc----------------------ceEEe-eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKD----------------------LRIAL-SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~----------------------~~~~~-~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|.|+| ++++.++..... .+... ..+.|.|.++..+ |+|.|+|.|.|..|
T Consensus 165 ~p~v~W-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~N~~g 237 (250)
T 2fbo_J 165 NANVTW-YTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKIT------DAGRVWCELATGQG 237 (250)
T ss_dssp TCEEEE-EEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGG------GCEEEEEEEESSSS
T ss_pred CCeeEE-EeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcc------cCEEEEEEecCCcc
Confidence 378999 888876643110 11122 3468999999766 99999999999776
Q ss_pred ce
Q psy11568 58 VI 59 (116)
Q Consensus 58 ~~ 59 (116)
..
T Consensus 238 ~~ 239 (250)
T 2fbo_J 238 EL 239 (250)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 341
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.56 E-value=3.4e-07 Score=54.21 Aligned_cols=58 Identities=19% Similarity=0.360 Sum_probs=38.1
Q ss_pred cEEEEEcc----CCeeeeccccceE--EeeCC--eEEecCCC-CCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 2 YVLLWLIR----DNTVIAYVKDLRI--ALSNG--SLMFPPFP-ETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 2 p~v~W~~~----~g~~~~~~~~~~~--~~~~~--~l~i~~v~-~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
|.+.| ++ ++..+......++ ...++ .|.|.++. .+ |+|.|+|.|.|..|...+ ..|.|
T Consensus 114 ~~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~------d~G~Y~C~a~N~~g~~~~~~~l~V 181 (184)
T 3b5h_A 114 TDWAW-YKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEA------DPGQYRCNGTSSKGSDQAIITLRV 181 (184)
T ss_dssp CEEEE-EECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTT------SSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CeEEE-EEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccc------cCceEEEEEEeCCCcceEEEEEEE
Confidence 78999 66 4444432222222 22222 79999996 56 999999999999987764 44443
No 342
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.56 E-value=9.2e-08 Score=58.64 Aligned_cols=60 Identities=10% Similarity=0.021 Sum_probs=31.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCe---EEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGS---LMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~---l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.|+|++.+|..+...........++. +.+.+++.+ |+|.|+|.|.|..|.... ..|.|
T Consensus 148 ~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~------d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 148 QPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGS------SGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp CCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----------CEEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechh------cCcEEEEEEEeCCCCeEEEEEEEE
Confidence 4899994345555543222112223332 334455444 999999999999987764 44444
No 343
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.55 E-value=6.2e-07 Score=53.16 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=38.8
Q ss_pred CcEEEEEccC--Ceeeecc---ccceEEe--e--CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIRD--NTVIAYV---KDLRIAL--S--NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~~--g~~~~~~---~~~~~~~--~--~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.+.| +++ +..+... ...++.. . ...|.|.++..+ |+|.|+|.|.|..|.... ..|.|
T Consensus 123 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 123 IPEITW-KRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS------DSGRYDCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp CCEEEE-EETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGG------GCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CCcEEE-EeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcc------cCEEEEEEEEecCCceEEEEEEEe
Confidence 378999 666 6655431 1112222 2 237999999766 999999999999987653 44443
No 344
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.54 E-value=4.3e-07 Score=50.39 Aligned_cols=30 Identities=17% Similarity=0.209 Sum_probs=25.7
Q ss_pred EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 23 ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 23 ~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
...+++|.|.+++.+ |+|.|+|.+.+..+.
T Consensus 68 ~~~ngSL~I~nvt~~------D~G~Ytc~v~~~~~~ 97 (111)
T 2qsq_A 68 IYPNASLLIQNIIQN------DAGFYTLHVIKSDLV 97 (111)
T ss_dssp ECTTSCEEECSCCGG------GCEEEEEEEEETTSC
T ss_pred EecCCcEEEccCccc------CCeEEEEEEEeCCCc
Confidence 456789999999766 999999999998664
No 345
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=2.7e-07 Score=51.32 Aligned_cols=59 Identities=10% Similarity=0.119 Sum_probs=38.4
Q ss_pred CcEEEEEccCCeeeeccc-cc-------eEEee-CC---eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEe
Q psy11568 1 MYVLLWLIRDNTVIAYVK-DL-------RIALS-NG---SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~-~~-------~~~~~-~~---~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~ 68 (116)
.|.++| ++||+++.... .. ++... ++ .|.|.++..+ |+|.|+|..-+.. ..+..|.|..
T Consensus 35 ~p~v~W-~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~------D~G~Y~~~~~~~~--~ssA~L~V~~ 105 (112)
T 2e6q_A 35 IIQGTW-FLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQ------DSGALVGFSCPGV--QDSAALTIQE 105 (112)
T ss_dssp CCCCEE-EESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCST------TCSEEEEEEETTE--EEEEEEEEEC
T ss_pred CCeEEE-EECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHH------HCccEEEEEECCe--eEEEEEEEeC
Confidence 378999 99999997543 01 44443 33 6999999766 9999977433322 2245566654
No 346
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.54 E-value=5.6e-07 Score=61.73 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=55.7
Q ss_pred EEEEEccCCeeeecc-ccceEE-eeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeee
Q psy11568 3 VLLWLIRDNTVIAYV-KDLRIA-LSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSL 74 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~-~~~~~~-~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~ 74 (116)
.|+| +++|+.+... ...... ..++ .|.|.....+ |.|.|+|.+.|..+......+...... .
T Consensus 330 ~i~W-~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~------d~g~y~C~a~n~~~~~~~~~~~~~~~~--~- 399 (512)
T 1zvo_C 330 HLTW-EVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWN------AGTSVTCTLNHPSLPPQRLMALREPAA--Q- 399 (512)
T ss_pred EEEE-EECCEeccCceeccceecCCCCeEEEEEEEEEchHHhc------CCCeEEEEEEeCCCCCCceeEEeecCC--C-
Confidence 8999 8998876521 110111 1122 4777777544 899999999998764322111111100 0
Q ss_pred eccCCCceEecCCCeEEEeCCCcEE-EEeeecCcCCc--eeEEe
Q psy11568 75 LDIQGPLFRIEPPYRFEFSNESGGR-LDCAAQGSPTP--KIEWL 115 (116)
Q Consensus 75 ~~~~~p~~~~~~~~~~~~~~g~~~~-l~C~~~g~P~p--~i~W~ 115 (116)
...+ |.+...++.. .|+.+. |.|.+.|.+++ .++|+
T Consensus 400 ~~~~-p~v~~~~~~~----~~~~~~~L~C~~~g~~P~~i~v~W~ 438 (512)
T 1zvo_C 400 APVK-LSLNLLASSD----PPEAASWLLCEVSGFSPPNILLMWL 438 (512)
T ss_pred CCCC-CEEEEEccCc----CCCCceEEEEEEeeeCCCCcEEEEE
Confidence 0011 5444433222 688899 99999996544 57896
No 347
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.53 E-value=2.3e-07 Score=55.79 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=30.4
Q ss_pred CcEEEEEccCCeeeeccccc-eEEee---CCeEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 1 MYVLLWLIRDNTVIAYVKDL-RIALS---NGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~-~~~~~---~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|.++| +++|..+...... ..... .+.|.|.++..+ |+|.|+|.|.|..+
T Consensus 128 ~~~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 128 FDGFIL-CKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPS------RRWWYRCYAYDSNS 181 (198)
T ss_dssp CSEEEE-EEC------CEEEC------CCEEEEEECCCCTT------SCEEEEEEEECTTS
T ss_pred CcEEEE-EECCCccCCccccccccCCCcceeEEEecccCcc------cCeEEEEEEEeCCC
Confidence 378999 8888876421111 11111 257999999766 99999999999875
No 348
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.50 E-value=2.5e-07 Score=56.44 Aligned_cols=47 Identities=17% Similarity=0.288 Sum_probs=37.6
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++|..+... ..+.|.|.++..+ |+|.|+|.|.|..|...+
T Consensus 147 ~~~v~W-~~~~~~~~~~-------~~~~L~i~~v~~~------d~G~Y~C~a~n~~g~~~s 193 (218)
T 3k0w_A 147 IPHYQW-FKNELPLTHE-------TKKLYMVPYVDLE------HQGTYWCHVYNDRDSQDS 193 (218)
T ss_dssp CCEEEE-EETTEECTTC-------CSSEEEESSCCGG------GCEEEEEEEECSSCEEEC
T ss_pred CCeEEE-EECCEECCCC-------CCCEEEEeecChh------cCEEEEEEEEcCCCCcee
Confidence 378999 8898877532 2347999999766 999999999999887665
No 349
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.50 E-value=7.9e-08 Score=57.17 Aligned_cols=45 Identities=9% Similarity=0.058 Sum_probs=33.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
+|.|+| +++|+++.... .+.|.++..+ |+|.|+|.|.|..|...+
T Consensus 124 ~p~i~W-~~~g~~l~~~~---------~~~i~~~~~~------d~G~Y~C~a~N~~g~~~~ 168 (176)
T 1hng_A 124 DVELKL-YQGKEHLRSLR---------QKTMSYQWTN------LRAPFKCKAVNRVSQESE 168 (176)
T ss_dssp SCEEEE-EETTEEEEEES---------SSEEEEECSC------CSSCEEEEEEETTEEEEE
T ss_pred CcEEEE-EECCEECCCCC---------cEEEEEEEcc------CCeEEEEEEEecCCCcee
Confidence 378999 88998876322 1334456444 999999999999987765
No 350
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.49 E-value=1.6e-07 Score=50.84 Aligned_cols=42 Identities=17% Similarity=0.302 Sum_probs=29.4
Q ss_pred EEEEccCCeeeeccccceEEeeCC--eEEecCCCCCCCCCCCCceEEEEEE
Q psy11568 4 LLWLIRDNTVIAYVKDLRIALSNG--SLMFPPFPETGFRPDVHSTVYRCRA 52 (116)
Q Consensus 4 v~W~~~~g~~~~~~~~~~~~~~~~--~l~i~~v~~~~~~~~~d~G~y~C~a 52 (116)
|.| ++++..+...........+. .|.|.++..+ |+|.|+|.+
T Consensus 39 v~W-~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~~ 82 (103)
T 2e7b_A 39 VKW-CYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQ------DSGRYSCSF 82 (103)
T ss_dssp CEE-EESSSBCCCSSSEEEEECSSEEEEEECSCCTT------TCCCEEEEC
T ss_pred eEE-EECCEECCCCCcEEEEEcCCEEEEEEccCCcc------cCEEEEEEE
Confidence 899 88888876433322222222 4999999766 999999983
No 351
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.49 E-value=2.5e-07 Score=57.42 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=44.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc-----------eE---EEEEEEEeCcEeeeeccCCCceEecCCCeEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV-----------IL---SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFS 93 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-----------~~---~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~ 93 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...+.|... ... .|.+...+ ....+.
T Consensus 87 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~-----~~~-~P~v~~~~-~~~~~~ 153 (239)
T 3tv3_H 87 FLKLNSVTAA------DTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSA-----STK-GPSVFPLA-PSSKST 153 (239)
T ss_dssp EEEECSCCGG------GCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCC-----CCB-CCEEEEEC-CCCCC-
T ss_pred EEEECCCChh------hCEEEEEEEecCccccccccccccceeeeCCCcEEeeccC-----CCc-CCEEEEEC-CChhhc
Confidence 4999999766 999999999875320 01 122333210 011 25555333 222334
Q ss_pred CCCcEEEEeeecCc-CCc-eeEEe
Q psy11568 94 NESGGRLDCAAQGS-PTP-KIEWL 115 (116)
Q Consensus 94 ~g~~~~l~C~~~g~-P~p-~i~W~ 115 (116)
.|+.+.|.|.+.+. |.+ .++|+
T Consensus 154 ~g~~v~l~C~~~~~~p~~~~v~W~ 177 (239)
T 3tv3_H 154 SGGTAALGCLVKDYFPEPVTVSWN 177 (239)
T ss_dssp -TTEEEEEEEEEEEBSSCCEEEEG
T ss_pred cCCcEEEEEEEeeEeCCCeEEEEE
Confidence 69999999999984 544 37796
No 352
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.48 E-value=1.9e-07 Score=55.86 Aligned_cols=53 Identities=28% Similarity=0.445 Sum_probs=38.8
Q ss_pred c-EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEE
Q psy11568 2 Y-VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHV 66 (116)
Q Consensus 2 p-~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v 66 (116)
| .++| +++|..+...... ..++.|.|.++. |+|.|+|.|.|..|...+ ..|.|
T Consensus 136 p~~v~W-~~~~~~~~~~~~~---~~~~~L~i~~~~--------d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 136 PVDLLW-LQDAVPLATAPGH---GPQRSLHVPGLN--------KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CCEEEE-EESSCBSSSSTTS---SCCEEEEECCCS--------SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEE-EECCEeccCCCCc---CCCCeEEEcccc--------cCceEEEEEEcCCCceEEEEEEEEE
Confidence 5 8999 8898887643221 345579999884 799999999999987753 44444
No 353
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.48 E-value=3.1e-07 Score=56.49 Aligned_cols=61 Identities=18% Similarity=0.294 Sum_probs=40.3
Q ss_pred CcEEEEEcc----CCeeeeccccceEE----------eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEE
Q psy11568 1 MYVLLWLIR----DNTVIAYVKDLRIA----------LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVH 65 (116)
Q Consensus 1 ~p~v~W~~~----~g~~~~~~~~~~~~----------~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~ 65 (116)
.|.+.| ++ +|..+......... ..++.|.|.++..+ |+|.|+|.|.|..|.... ..|.
T Consensus 143 ~p~v~W-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~N~~g~~~~~~~l~ 215 (241)
T 3grw_A 143 QPHIQW-LKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSER------DGGEYLCRATNFIGVAEKAFWLS 215 (241)
T ss_dssp CCEEEE-EEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGG------GCEEEEEEEECSSCEEEEEEEEE
T ss_pred CCEEEE-EEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcc------cCcEEEEEEecCcceEEEEEEEE
Confidence 368999 66 77776532211110 12336999999766 999999999999987764 5555
Q ss_pred EEe
Q psy11568 66 VKA 68 (116)
Q Consensus 66 v~~ 68 (116)
|..
T Consensus 216 V~~ 218 (241)
T 3grw_A 216 VHG 218 (241)
T ss_dssp C--
T ss_pred ecC
Confidence 544
No 354
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.48 E-value=4e-07 Score=64.73 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=60.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPL 81 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~ 81 (116)
|.|.| .++|..+... ..+.+.|..+... ...+.|.|.+.+..|......+.+... .....|.
T Consensus 106 p~i~W-~k~g~~~~~~-------~~~~~~i~~~~~~-----~~~l~~~~va~~~~G~~~~~~v~~~~~-----~~~~~p~ 167 (731)
T 2v5y_A 106 GNPIW-NISGDPTRTW-------NRAELAISTFWPN-----FYQVIFEVITSGHQGYLAIDEVKVLGH-----PCTRTPH 167 (731)
T ss_dssp CSEEE-EECCCCCSSC-------EEEEEEECCCTTS-----CEEEEEEEEECSSCCEEEECCBEEESS-----CCSSSCE
T ss_pred cceeE-EEeCCcCCce-------eEEEEEEeecCCC-----ceEEEEEEEecCCceEEEEeeEEeeec-----ccccccc
Confidence 67899 8887665321 1123445544111 145899999988888665432222221 0111255
Q ss_pred eEecCCCeEEEeCCCcEEEEeeecCcCCceeE-Ee
Q psy11568 82 FRIEPPYRFEFSNESGGRLDCAAQGSPTPKIE-WL 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~-W~ 115 (116)
+. .+ .+..+..|+++.|.|.+.|.|.|.+. |+
T Consensus 168 ~~-~~-~~~~v~~G~~v~l~C~~~g~P~p~i~~W~ 200 (731)
T 2v5y_A 168 FL-RI-QNVEVNAGQFATFQCSAIGRTVAGDRLWL 200 (731)
T ss_dssp EC-CC-CCEEEETTSCEEEEEEEESCCCTTCEEEE
T ss_pred cc-cc-cceEEeCCCcEEEEEEeCCCCCCceeEEE
Confidence 54 44 67889999999999999999999998 75
No 355
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.47 E-value=1.1e-06 Score=48.46 Aligned_cols=55 Identities=18% Similarity=0.255 Sum_probs=36.0
Q ss_pred CcEEEEEccCC---eeeeccccce--EEeeCC----eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDN---TVIAYVKDLR--IALSNG----SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g---~~~~~~~~~~--~~~~~~----~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+|.+.+| .++......+ ....++ .|.|.+|... |+|.|+|.|.+..|...+
T Consensus 44 rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~s------DsG~YrCsAn~~~g~ieS 107 (122)
T 1xau_A 44 RPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLS------DNGSYSCSTNFNSQVINS 107 (122)
T ss_dssp CCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGG------GCEEEEEEEEETTEEEEC
T ss_pred CCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEc------CCccEEEEeeCCCCceee
Confidence 48999955555 3332211111 111222 6888999655 999999999999988875
No 356
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.47 E-value=5.5e-08 Score=58.47 Aligned_cols=53 Identities=25% Similarity=0.494 Sum_probs=39.1
Q ss_pred CcEEEEEccCCeeeecccc-------ceEEe--eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 1 MYVLLWLIRDNTVIAYVKD-------LRIAL--SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~-------~~~~~--~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
.|.+.| +++|..+..... .++.. .++.|.|.++..+ |+|.|+|.|.|..|...
T Consensus 137 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 137 PSEYTW-FKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSAS------DTGEYSCEARNGYGTPM 198 (209)
T ss_dssp CCEEEE-EETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGG------GCCCEEEEEECSSSCCE
T ss_pred CceeEE-EECCeeCCCccccceeeeccceEEcCCcceEEEEecccc------CCeEEEEEEeCCcCccc
Confidence 378999 888888764221 11111 3458999999766 99999999999998873
No 357
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.45 E-value=7.7e-06 Score=52.22 Aligned_cols=91 Identities=13% Similarity=0.247 Sum_probs=59.0
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEeCcEeeeeccCCCc
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKAGSVVSLLDIQGPL 81 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~~~~~~~~~~~~p~ 81 (116)
++.| ++||.++.. ..+.|.+..+... |+|.|+|.+.+..|.... ..+.|... ..+.
T Consensus 37 TYqW-yKDG~~IsG--------aT~tLti~s~t~s------dSG~YqCvVTDa~Gcs~tSs~VtVT~~--------a~l~ 93 (304)
T 3shs_A 37 TYTW-TKDDQPHEN--------NTATLTVADATSE------NAGSYKVTVQDTDTMTSVESEVFLMEE--------AELI 93 (304)
T ss_dssp EEEE-EETTEECSC--------CSSEEEESSCCGG------GCEEEEEEEEETTTCCEEECCCEEECB--------CCEE
T ss_pred eEEE-EECCccccC--------CcceEEeeecccc------CCeEEEEEEEECCCCeeeeeeEEEecc--------Ccee
Confidence 6889 899877641 2347788888655 999999999998876553 22333321 0123
Q ss_pred eEecCCCeEEEeCCCcEEEEeee--cC-cC-----CceeEEeC
Q psy11568 82 FRIEPPYRFEFSNESGGRLDCAA--QG-SP-----TPKIEWLI 116 (116)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~--~g-~P-----~p~i~W~~ 116 (116)
+....+....+..+..+.|.+.+ +| .| ...+.|+.
T Consensus 94 i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyK 136 (304)
T 3shs_A 94 VNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSK 136 (304)
T ss_dssp EEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEE
T ss_pred EEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEee
Confidence 33333355666667889998877 43 44 35888973
No 358
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.44 E-value=4.7e-07 Score=53.42 Aligned_cols=46 Identities=28% Similarity=0.379 Sum_probs=35.4
Q ss_pred c-EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 2 Y-VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 2 p-~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
| .++| +++|..+.... ..+..|.|.++. |+|.|+|.|.|..|...+
T Consensus 128 p~~v~W-~~~~~~~~~~~-----~~~~~L~i~~~~--------d~G~Y~C~a~N~~g~~~s 174 (182)
T 1rhf_A 128 PVTIVW-WRGTTKIGGPA-----PSPSVLNVTGVT--------QSTMFSCEAHNLKGLASS 174 (182)
T ss_dssp CCEEEE-EETTEECSCSE-----ESSEEEEECCCS--------SCEEEEEEEEETTEEEEC
T ss_pred CCEEEE-EcCCeECCCCC-----CCceEEEEeccc--------cCeEEEEEEECCCCCccc
Confidence 5 8999 88988875321 145578888872 899999999999987753
No 359
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.44 E-value=1.6e-06 Score=59.52 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=24.6
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCc--eeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTP--KIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~ 115 (116)
|.+...++....+..|+.+.|.|.+.|.+++ .++|+
T Consensus 297 p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~ 334 (512)
T 1zvo_C 297 LGVYLLTPAVQDLWLRDKATFTCFVVGSDLKDAHLTWE 334 (512)
T ss_pred CEEEEECCChHHhccCCceEEEEEEeceECCCeEEEEE
Confidence 4443333344446679999999999997443 88996
No 360
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.43 E-value=6.5e-07 Score=51.54 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=27.2
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
..|.|.++..+ |+|.|.|.+.|. |.... ..|.|..
T Consensus 103 ~~L~I~~v~~~------DsG~Y~C~~~n~-~~~~~~~~L~V~~ 138 (145)
T 1z9m_A 103 LSISISNVALA------DEGEYTCSIFTM-PVRTAKSLVTVLG 138 (145)
T ss_dssp EEEEECSCCGG------GCEEEEEEECSS-SCEEEEEEEEEEC
T ss_pred EEEEECCCChh------hCEEEEEEEEcC-CCceEEEEEEEEe
Confidence 47999999766 999999999999 76553 4555554
No 361
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.42 E-value=3.4e-08 Score=60.39 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=45.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|.|.+.|..+... ...+.+.. ...+ |.+...++....+..|+.+.|.|.+.|
T Consensus 67 ~L~I~~~~~~------D~g~Y~C~~~~~~~~~~~~~~i~~~~------~~~~-P~v~~~~~~~~~~~~g~~~~L~C~~~g 133 (214)
T 1ow0_A 67 VLPGCAEPWN------HGKTFTCTAAYPESKTPLTATLSKSG------NTFR-PEVHLLPPPSEELALNELVTLTCLARG 133 (214)
T ss_dssp ECTTTHHHHH------HTCEEEEEECCSSCSSCEEEEEECCS------SCCC-CEEEEECCCTTTTTSSSEEEEEEEEEE
T ss_pred EEEEeHHHcC------CCCeEEEEEecCCCCCceeEeeccCC------CCCC-CEEEecCCCHHHhccCCceEEEEEEee
Confidence 4666666444 89999999999876432 22221100 0112 555433322223456888999999999
Q ss_pred c-CC-ceeEEe
Q psy11568 107 S-PT-PKIEWL 115 (116)
Q Consensus 107 ~-P~-p~i~W~ 115 (116)
. |. +.++|+
T Consensus 134 ~~P~~~~v~W~ 144 (214)
T 1ow0_A 134 FSPKDVLVRWL 144 (214)
T ss_dssp ESSSCCEEEEE
T ss_pred eECCCcEEEEE
Confidence 5 53 489996
No 362
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.41 E-value=2.7e-07 Score=55.45 Aligned_cols=49 Identities=10% Similarity=0.021 Sum_probs=31.8
Q ss_pred cEEEEEccCCeeeeccccceEEee----CCeEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~----~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
|.++| +++|..+........... .+.|.|.++..+ |+|.|+|.|.|..+
T Consensus 128 ~~~~W-~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 128 DRFIL-TEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPS------HRWMLRCYGSRRHI 180 (196)
T ss_dssp SEEEE-EEC---CCEEEEECEECTTSCEEEEEECCCCBTT------BCEEEEEEEEETTE
T ss_pred CEEEE-EccCCcccccccccccccCCCceeEEEeeecCcc------cCeeEEEEEEccCC
Confidence 68999 888887642111111111 247999999766 99999999999864
No 363
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=98.40 E-value=1e-06 Score=54.32 Aligned_cols=74 Identities=15% Similarity=0.293 Sum_probs=45.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC-----Cce--E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA-----GVI--L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-----g~~--~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.+.. +.. . ...|.|... ....|.+...+ ....+..|+.+
T Consensus 80 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~v~~~~-~~~~~~~g~~v 146 (230)
T 3n9g_H 80 YMELSSLRSE------DTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSA------STKGPSVFPLA-PSSKSTSGGTA 146 (230)
T ss_dssp EEEECSCCGG------GCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSS------CCBCCEEEEEC-CCCCCCTTCEE
T ss_pred EEEECCCChh------hCEEEEEEEccCCCCcccccccccCCCEEEEEEec------CCCCCEEEecC-CCccccCCCCE
Confidence 4999999766 9999999998864 111 1 123444311 01125444322 22234579999
Q ss_pred EEEeeecCc-C-CceeEE
Q psy11568 99 RLDCAAQGS-P-TPKIEW 114 (116)
Q Consensus 99 ~l~C~~~g~-P-~p~i~W 114 (116)
.|.|.+.+. | .+.++|
T Consensus 147 ~L~C~~~~~~P~~~~v~W 164 (230)
T 3n9g_H 147 ALGCLVKDYFPEPVTVSW 164 (230)
T ss_dssp EEEEEEEEEBSSCCEEEE
T ss_pred EEEEEEEeEECCCEEEEE
Confidence 999999885 4 345788
No 364
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.40 E-value=8e-07 Score=55.63 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=42.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC---------------------ceE--EEEEEEEeCcEeeeeccCCCceEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG---------------------VIL--SRFVHVKAGSVVSLLDIQGPLFRI 84 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g---------------------~~~--~~~~~v~~~~~~~~~~~~~p~~~~ 84 (116)
.|.|.++..+ |+|.|.|.+.+..+ ... ...+.|... ... .|.+..
T Consensus 79 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~-----~~~-~P~v~~ 146 (248)
T 3u2s_H 79 YLQMNSLRVE------DTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSA-----STK-GPSVFP 146 (248)
T ss_dssp EEEECSCCGG------GCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSC-----CCB-CCEEEE
T ss_pred EEEECCCCHH------HCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEccc-----CCC-CCEEEE
Confidence 4999999766 99999999987421 011 123333310 011 255543
Q ss_pred cCCCeEEEeCCCcEEEEeeecCc-C-CceeEEe
Q psy11568 85 EPPYRFEFSNESGGRLDCAAQGS-P-TPKIEWL 115 (116)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~g~-P-~p~i~W~ 115 (116)
.+ ....+..|+.+.|.|.+.+. | .+.++|+
T Consensus 147 ~~-~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~ 178 (248)
T 3u2s_H 147 LA-PSSKSTSGGTAALGCLVKDYFPEPVTVSWN 178 (248)
T ss_dssp EC-CC------CEEEEEEEEEEEBSSCCEEEEG
T ss_pred eC-CCccccCCCcEEEEEEEeeEECCCeEEEEe
Confidence 33 22334569999999999884 4 3468896
No 365
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.40 E-value=2.9e-06 Score=46.34 Aligned_cols=54 Identities=19% Similarity=0.268 Sum_probs=37.5
Q ss_pred CcEEEEEccCC---eeeeccccceEEeeCC----eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDN---TVIAYVKDLRIALSNG----SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g---~~~~~~~~~~~~~~~~----~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|+++|-+-+| .+|..... .....++ .|.+..+-.. |+|.|+|.|.+..|...+
T Consensus 41 rP~VtWcKln~~~c~~L~~~~q-~w~E~~N~s~fvLhf~~V~~s------DsGsYRCsAn~~sg~ieS 101 (120)
T 2aw2_A 41 RPHVTWCKLNGTTCVKLEDRQT-SWKEEKNISFFILHFEPVLPN------DNGSYRCSANFQSNLIES 101 (120)
T ss_dssp CCEEEEEEECSSCEEECCSSCE-EEEECSSCEEEEEEESSCCGG------GCEEEEEEEEETTEEEEC
T ss_pred CCceEEEecCCceEEECccccc-cceecCCeeEEEEEEeeeeEc------CCcceEEEeeCCCCcEEe
Confidence 38999966665 55543111 1123334 5888888655 999999999999998886
No 366
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.39 E-value=1.7e-06 Score=52.60 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=41.0
Q ss_pred CcEEEEEcc----CCeeeeccccce--EE-------eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 1 MYVLLWLIR----DNTVIAYVKDLR--IA-------LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 1 ~p~v~W~~~----~g~~~~~~~~~~--~~-------~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.|.+.| ++ +|..+....... .. ...+.|.|.++..+ |+|.|+|.|.|..|.... ..|.|
T Consensus 147 ~p~v~W-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~------d~G~Y~C~a~n~~g~~~~~~~l~V 219 (231)
T 3ojm_B 147 QPHIQW-IKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEA------DAGEYICKVSNYIGQANQSAWLTV 219 (231)
T ss_dssp CCEEEE-EEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEE-EECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHH------HCeEEEEEEEeccceEeeEEEEEE
Confidence 378999 66 777664321111 11 12346999999766 999999999999988763 55555
Q ss_pred Ee
Q psy11568 67 KA 68 (116)
Q Consensus 67 ~~ 68 (116)
..
T Consensus 220 ~~ 221 (231)
T 3ojm_B 220 LP 221 (231)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 367
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.39 E-value=4.6e-07 Score=49.81 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=32.1
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.|+..+ .+..+.+|+++.|.|.+.|.|.|.++|+.
T Consensus 14 P~f~~~p-~~~~v~~G~~~~l~C~~~G~P~p~v~W~k 49 (107)
T 3knb_B 14 PCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWEK 49 (107)
T ss_dssp EEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEE
T ss_pred CEEEeCC-CcEEEeCCCcEEEEEEEEEecCCEEEEEE
Confidence 6776666 78899999999999999999999999973
No 368
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.37 E-value=1.5e-06 Score=54.41 Aligned_cols=74 Identities=16% Similarity=0.296 Sum_probs=43.2
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC---------ce-E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG---------VI-L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNE 95 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g---------~~-~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 95 (116)
.|.|.+++.+ |+|.|.|.+.+..+ .. . ...|.|... ....|.+.... ....+..|
T Consensus 103 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~------~~~~P~i~~~~-~~~~~~~g 169 (256)
T 3sob_H 103 YLQMNSLRAE------DTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSA------STKGPSVFPLA-PSSKSTSG 169 (256)
T ss_dssp EEEECSCCGG------GCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSS------CCBCCEEEEEC-CC-----T
T ss_pred EEEECCCCcc------cCEEEEEEEecCCCccccccccceeEECCCEEEEEecC------CCCCCEEEEEC-CCcccccC
Confidence 3999999766 99999999987531 11 1 123444321 01125554333 22345679
Q ss_pred CcEEEEeeecCc-C-CceeEE
Q psy11568 96 SGGRLDCAAQGS-P-TPKIEW 114 (116)
Q Consensus 96 ~~~~l~C~~~g~-P-~p~i~W 114 (116)
+.+.|.|.+.+. | .+.++|
T Consensus 170 ~~v~L~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 170 GTAALGCLVKDYFPEPVTVSW 190 (256)
T ss_dssp TEEEEEEEEEEEBSSCCEEEE
T ss_pred CcEEEEEEEEEEECCCeEEEE
Confidence 999999999884 4 346788
No 369
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.37 E-value=9.9e-07 Score=53.61 Aligned_cols=61 Identities=10% Similarity=0.013 Sum_probs=39.6
Q ss_pred CcEEEEEcc-CCeeeeccccceEE-eeCCe---EEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 1 MYVLLWLIR-DNTVIAYVKDLRIA-LSNGS---LMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 1 ~p~v~W~~~-~g~~~~~~~~~~~~-~~~~~---l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.+.| ++ ++..+......... ..++. |.|.++..+ |+|.|+|.+.|..|.... ..|.|..
T Consensus 140 ~~~v~W-~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~------d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 140 EAEVFW-KDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLG------ANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp CCEEEE-ECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECC------TTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred CCeEEE-EcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeC------CCCEEEEEEECCCCCCceEEEEEEeC
Confidence 378999 55 67665431111111 22332 778888655 999999999999988764 5555544
No 370
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.35 E-value=3.2e-07 Score=49.82 Aligned_cols=36 Identities=25% Similarity=0.524 Sum_probs=30.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.|...+ .+..+.+|+.+.|.|.+.|.|.|.++|+.
T Consensus 6 P~i~~~p-~~~~v~~G~~~~l~C~~~g~P~p~v~W~k 41 (100)
T 3knb_A 6 PKIEALP-SDISIDEGKVLTVACAFTGEPTPEVTWSC 41 (100)
T ss_dssp EEECCCC-SEEEEETTSEEEEEEEEEEESCCEEEEEE
T ss_pred CEEEeCC-CcEEEeCCCeEEEEEEEEEecCCEEEEEE
Confidence 5554444 88899999999999999999999999973
No 371
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.34 E-value=2.3e-06 Score=47.36 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=26.0
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
.+|.|.++..+ |+|.|.|.+.+..+.... ..|.|
T Consensus 89 ~sL~I~~v~~~------D~G~Y~C~v~~~~~~~~~~~~L~V 123 (126)
T 1eaj_A 89 ASINVTNLQLS------DIGTYQCKVKKAPGVANKKIHLVV 123 (126)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEECcCChH------HCeEEEEEEEcCCccCCcEEEEEE
Confidence 47999999766 999999999998765442 44444
No 372
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.34 E-value=3.4e-07 Score=54.97 Aligned_cols=49 Identities=14% Similarity=0.241 Sum_probs=34.8
Q ss_pred cEEEEEccCCeeeeccccc-e--EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-R--IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~--~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
+.+.| +++|..+...... . ....++.|.|.++..+ |+|.|+|.|.|..+
T Consensus 128 ~~~~w-~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 128 DTFLL-CKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSV------HGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEE-EETTCCCGGGSEEEEEEEEEEEEEEEECSCCGG------GCEEEEEEEECGGG
T ss_pred CEEEE-EeCCCcccceeecccccccCcceEEEeCCCccc------CCCeEEEEEEcCCC
Confidence 56889 8888766432111 1 1223457999999766 99999999999876
No 373
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.31 E-value=9.3e-07 Score=53.06 Aligned_cols=53 Identities=9% Similarity=0.125 Sum_probs=33.7
Q ss_pred CcEEEEEccCCeeeeccccceEEe-eC-CeEE---ecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIAL-SN-GSLM---FPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~-~~-~~l~---i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+| ++||.++..... +... .+ +... +..+..+ |+|.|+|.|.|..|....
T Consensus 136 ~p~i~W-~k~g~~l~~~~~-~~~~~~~~~~~~~~~~~~v~~~------d~g~Y~C~a~n~~~~~s~ 193 (201)
T 1dr9_A 136 EPHLSW-LENGEELNAINT-TVSQDPETELYAVSSKLDFNMT------TNHSFMCLIKYGHLRVNQ 193 (201)
T ss_dssp CEEEEE-EESSCEECCSEE-EEEECTTTCCEEEEEEEEEETT------SCEEEEEEEEETTCCEEE
T ss_pred CCEEEE-EECCEECccccc-eEEecCCCcEEEEEEEEEEEec------CCCEEEEEEecCcceeee
Confidence 378999 889988864221 2222 22 2222 2334333 999999999999987654
No 374
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.30 E-value=1.2e-06 Score=53.88 Aligned_cols=74 Identities=15% Similarity=0.257 Sum_probs=44.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc------eE----EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV------IL----SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESG 97 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~------~~----~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 97 (116)
.|.|.++..+ |+|.|.|.+.+..+. .. ...|.|... ....|.+...+ ....+..|..
T Consensus 80 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~------~~~~P~i~~~~-~~~~~~~g~~ 146 (226)
T 3mlr_H 80 YLQWTTLQAS------DTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSG------TTKGPSVFPLA-PSSKSTSGGT 146 (226)
T ss_dssp EEEESSCCGG------GCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCC------CCBCCEEEEEE-EEECSTTSSE
T ss_pred EEEECCCCcc------cCEEEEEeEccCCCcccccchhhhhCCccEEeeccC------CCCCCcEEEec-CcccccCCCC
Confidence 4999999766 999999998775310 00 123333221 01124443222 2223457899
Q ss_pred EEEEeeecCc-C-CceeEE
Q psy11568 98 GRLDCAAQGS-P-TPKIEW 114 (116)
Q Consensus 98 ~~l~C~~~g~-P-~p~i~W 114 (116)
+.|.|.+.+. | .+.++|
T Consensus 147 ~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 147 AALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp EEEEEEEEEEBSSCCEEEE
T ss_pred EEEEEEEEEEECCCeEEEE
Confidence 9999999885 4 457888
No 375
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.30 E-value=4.2e-06 Score=45.94 Aligned_cols=43 Identities=21% Similarity=0.408 Sum_probs=33.4
Q ss_pred EEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
++.| ++||..+.. ...+..+.|.+++++ |+|.|+|.+.+..+.
T Consensus 43 ~~~w-~k~g~~l~~------~~~~~~l~i~~v~~~------dsG~Y~C~~~~~~~~ 85 (108)
T 4hwn_A 43 LFSF-YKDGRIVQS------RGLSSEFQIPTASED------HSGSYWCEAATEDNQ 85 (108)
T ss_dssp EEEE-EETTEEEEE------EESCCEEEESSCCGG------GCEEEEEEEECTTSS
T ss_pred EEEE-EECCcCccC------CCcccEEEeCccCcc------cCeEEEEEEEeCCCc
Confidence 4889 889887642 224568999999766 999999999997653
No 376
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.29 E-value=1.1e-06 Score=55.54 Aligned_cols=74 Identities=20% Similarity=0.317 Sum_probs=42.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC-----ce--E--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG-----VI--L--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGG 98 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g-----~~--~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 98 (116)
.|.|.++..+ |+|.|.|.+.+..+ .. . ...|.|... ... .|.+....+. ..+..|+.+
T Consensus 79 sL~I~~v~~~------DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~-----~~~-~P~v~~~~~~-~~~~~g~~~ 145 (263)
T 3iu4_H 79 FLKMNSLQTD------DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAA-----STK-GPSVFPLAPS-SKGSTSGTA 145 (263)
T ss_dssp EEEECSCCGG------GCEEEEEEEEECC---CEEEEEEECCCEEEEECSS-----CCB-CCEEEEECCC-CCC----EE
T ss_pred EEEECCCCHH------HCEEEEEEEEeCCCCccccccceeCCceEEEEecc-----cCC-CCEEEEccCc-cccccCCcE
Confidence 4999999766 99999999987641 11 1 123434311 001 2554422212 223478999
Q ss_pred EEEeeecCc-C-CceeEE
Q psy11568 99 RLDCAAQGS-P-TPKIEW 114 (116)
Q Consensus 99 ~l~C~~~g~-P-~p~i~W 114 (116)
.|.|.+.+. | .+.++|
T Consensus 146 ~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 146 ALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp EEEEEEEEEBSSCCEEEE
T ss_pred EEEEEEEeEeCCceEEEE
Confidence 999999885 4 257889
No 377
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.26 E-value=1.6e-06 Score=46.03 Aligned_cols=36 Identities=17% Similarity=0.395 Sum_probs=30.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.++|+.
T Consensus 3 P~i~~~~-~~~~v~~G~~~~l~C~~~g~P~p~i~W~k 38 (93)
T 1wit_A 3 PKILTAS-RKIKIKAGFTHNLEVDFIGAPDPTATWTV 38 (93)
T ss_dssp CEECCCC-CEEEECTTBCCEEEEEEECCSSCEEEEEC
T ss_pred CeEEcCC-CceEEeCCCEEEEEEEEEEcCCCEEEEEE
Confidence 6664444 78889999999999999999999999974
No 378
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.26 E-value=1.1e-05 Score=44.80 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=27.8
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEc-CCCceEE-EEEEEEeC
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASN-EAGVILS-RFVHVKAG 69 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n-~~g~~~~-~~~~v~~~ 69 (116)
+..|.|.+++.+ |+|.|.|...+ ..|.... ..|.|..+
T Consensus 70 ~~sL~I~~v~~~------D~G~Y~C~v~~~~~g~~~~~~~L~V~~p 109 (117)
T 3q0h_A 70 GLGLTLQSLTVN------DTGEYFCIYHTYPDGTYTGRIFLEVLES 109 (117)
T ss_dssp TTCEEECSCCGG------GCEEEEEEEEEETTCCEEEEEEEEEECC
T ss_pred ceEEEEeeCChh------hCEEEEEEEEECCCCCeEEEEEEEEEcc
Confidence 458999999766 99999998654 4565553 55666654
No 379
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.25 E-value=3.4e-07 Score=54.55 Aligned_cols=47 Identities=15% Similarity=0.195 Sum_probs=34.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
|.+.| +++|..+.. .......++.|.|.++..+ |+|.|+|.|.|..+
T Consensus 122 ~~~~w-~k~g~~~~~--~~~~~~~~~~L~i~~v~~~------D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 122 DQFAL-YKEGDPAPY--KNPERWYRASFPIITVTAA------HSGTYRCYSFSSRD 168 (184)
T ss_dssp CEEEE-EECCCCTTS--CCCCEEEEESSSEEEETTC------CSEEEEEEEECTTS
T ss_pred cEEEE-EECCCcCcc--eecCCCceEEEEEccCCcc------CCeEEEEEEEeCCC
Confidence 67899 888877653 1112233457889999666 99999999999864
No 380
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.25 E-value=8.8e-07 Score=54.39 Aligned_cols=46 Identities=11% Similarity=0.132 Sum_probs=33.7
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
|.+.| +++|..+.. .......++.|.|.++..+ |+|.|+|.|.|..
T Consensus 135 ~~~~W-~k~g~~~~~--~~~~~~~~~~L~I~~v~~~------D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 135 DRFSL-AKEGELSLP--QHQSGEHPANFSLGPVDLN------VSGIYRCYGWYNR 180 (218)
T ss_dssp SEEEE-EETTCSSCC--SEEECSSSEEEECCSCCGG------GCEEEEEEEECTT
T ss_pred CEEEE-EECCCcccc--cccCCCccCEEEEccCCcc------cCEEEEEEEEcCC
Confidence 67899 888887653 1111223458999999766 9999999999864
No 381
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.22 E-value=1.1e-05 Score=44.13 Aligned_cols=36 Identities=22% Similarity=0.213 Sum_probs=25.7
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEE
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 67 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~ 67 (116)
+..|.|.++..+ |+|.|.|.+.+.........|.|.
T Consensus 72 ~~sL~I~~v~~~------DsG~Y~C~v~~~~~~~~~~~L~V~ 107 (110)
T 2ptt_A 72 NGALHISNVRKE------DKGTYYMRVLRETENELKITLEVF 107 (110)
T ss_dssp TCCEEESSCCGG------GCEEEEEEEESSSBCCEEEEEEEE
T ss_pred CccEEECCCCcc------cCeEEEEEEEcCCCcEEEEEEEEE
Confidence 458999999766 999999999876532223444443
No 382
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.22 E-value=2.2e-06 Score=51.44 Aligned_cols=51 Identities=14% Similarity=0.101 Sum_probs=34.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCC---eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNG---SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~---~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.|+| ++++.++.. ......++ .+.+.++..+ |+|.|+|.|.|..|....
T Consensus 132 ~p~v~W-~~~~~~~~~---~~~~~~~~~~~~~~i~~v~~~------d~G~Y~C~a~N~~g~~~~ 185 (202)
T 3bp6_B 132 LAEVSW-QNVSVPANT---SHIRTPEGLYQVTSVLRLKPQ------PSRNFSCMFWNAHMKELT 185 (202)
T ss_dssp CCEEEE-TTCCSCCEE---EEEECTTSCEEEEEEEEECCC------TTCCEEEEEEETTTTEEE
T ss_pred CceEEE-EeCCCCccC---ceeeCCCCCEEEEEEEEEEcC------CCCEEEEEEEcCCccccc
Confidence 378999 888776542 11112222 3456677544 999999999999987764
No 383
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.22 E-value=5.2e-06 Score=45.06 Aligned_cols=28 Identities=18% Similarity=0.120 Sum_probs=23.0
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
..|.|.++..+ |+|.|.|.+.+..+...
T Consensus 72 ~sL~I~~v~~~------D~G~Y~C~v~~~~~~~~ 99 (109)
T 2oyp_A 72 VSLIIKNVTLD------DHGTYCCRIQFPGLMND 99 (109)
T ss_dssp CCEEECSCCGG------GCEEEEEEECCSSTTCC
T ss_pred EeEEEccCCCh------hCeEEEEEEEcCCcccc
Confidence 37999999766 99999999999865444
No 384
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.21 E-value=4.3e-07 Score=54.31 Aligned_cols=46 Identities=15% Similarity=0.293 Sum_probs=32.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
|.+.| +++|..+.. .......++.|.|.++..+ |+|.|+|.|.|..
T Consensus 127 ~~~~w-~k~g~~~~~--~~~~~~~~~~L~I~~v~~~------d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 127 SMFLL-LKEGRSSHV--QRGYGKVQAEFPLGPVTTA------HRGTYRCFGSYNN 172 (188)
T ss_dssp SEEEE-EEESSSCEE--EEEECSSEEEEEEEECCGG------GCEEEEEECEEET
T ss_pred CEEEE-EECCccccc--cccCCCceeEEEECCCCcC------CCcEEEEEEEcCC
Confidence 67899 888876642 1111123447999999766 9999999999864
No 385
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.19 E-value=3e-06 Score=46.27 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=30.6
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCC---ceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPT---PKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~---p~i~W~ 115 (116)
|.|+..| ....+..|+++.|.|.+.|.|. |.+.|+
T Consensus 5 p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~ 42 (108)
T 3cx2_A 5 GLFVMRP-QDGEVTVGGSITFSARVAGASLLKPPVVKWF 42 (108)
T ss_dssp CSCSBCC-CCEEEETTCCEEEEEEEECC-CCSCCEEEEE
T ss_pred cEEEeCC-CcEEEeCCCCEEEEEEECCCccCCCcEEEEc
Confidence 7777776 7889999999999999999998 999997
No 386
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.18 E-value=1.1e-05 Score=48.57 Aligned_cols=70 Identities=11% Similarity=0.098 Sum_probs=43.9
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCce-EecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLF-RIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~-~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.+.|.+++ +.|.|.|.+... |......+.|.. +.. |.. ...+ ....+.+|+.+.|.|.+.|
T Consensus 51 ~l~l~~vs--------~~g~y~C~~~c~-~~~~~~~~~l~V------~~~--P~~v~i~~-~~~~~~~G~~~tL~C~v~g 112 (185)
T 1iam_A 51 VYELSNVQ--------EDSQPMCYSNCP-DGQSTAKTFLTV------YWT--PERVELAP-LPSWQPVGKQLTLRCQVEG 112 (185)
T ss_dssp EEEEEEEC--------SCBCCEEEEECS-SCEEEEECEEEE------EBC--CSEEEECC-CCSEECTTSEEEEEEEEEC
T ss_pred EEEEEecC--------cCCEEEEEEECC-CCceEEEEEEEE------eCC--CCCCEEcc-CCccccCCCcEEEEEEcCC
Confidence 58888884 239999998655 333333332222 111 333 3333 3345789999999999999
Q ss_pred c-CCc--eeEEe
Q psy11568 107 S-PTP--KIEWL 115 (116)
Q Consensus 107 ~-P~p--~i~W~ 115 (116)
. |.+ .|+|+
T Consensus 113 ~~P~~~l~i~w~ 124 (185)
T 1iam_A 113 GAPRAQLTVVLL 124 (185)
T ss_dssp CBCGGGEEEEEE
T ss_pred ccCCCCcEEEEE
Confidence 5 554 47997
No 387
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.17 E-value=3.8e-06 Score=50.72 Aligned_cols=47 Identities=17% Similarity=0.337 Sum_probs=31.8
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
.|.++| ++++..+.. .. ....+.|.|..+..+ |+|.|+|.|.|..+.
T Consensus 156 ~p~v~W-~~~~~~~~~-~~---~~~~~~L~i~~~~~~------~~g~Y~C~a~n~~~~ 202 (214)
T 2zg1_A 156 PLTFSW-TGNALSPLD-PE---TTRSSELTLTPRPED------HGTNLTCQMKRQGAQ 202 (214)
T ss_dssp CCEEEE-ESSTTSSSC-SS---CCCSSEEEECCCTTC------CSCEEEEEEECC---
T ss_pred CceEEE-eCCCCccCC-CC---ceeEEEEEEecccHH------cCcEEEEEEEeCCCC
Confidence 378999 788765321 11 134568999888655 999999999997643
No 388
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.16 E-value=4.7e-06 Score=50.02 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=30.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
|.|+| +++|..+. .++.|.|..... ..|+|.|+|.|.|..|...
T Consensus 140 p~i~W-~~~g~~l~---------~~~~l~i~~~~~-----~~d~G~Y~C~a~N~~g~~s 183 (193)
T 2if7_A 140 VSFRW-EALGNTLS---------SQPNLTVSWDPR-----ISSEQDYTCIAENAVSNLS 183 (193)
T ss_dssp CEEEE-EETTEEEE---------SSSEEEEEECTT-----TCSCCEEEEEEEETTEEEE
T ss_pred eEEEE-EeCCEEcC---------CCCeEEEEeccC-----cCCCCcEEEEEECCCCccc
Confidence 78999 88887654 233466643321 1289999999999998653
No 389
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.14 E-value=1.2e-05 Score=44.06 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=26.6
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEc-CCCceEE-EEEEEEe
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASN-EAGVILS-RFVHVKA 68 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n-~~g~~~~-~~~~v~~ 68 (116)
+.+|.|.++..+ |+|.|.|.+.+ ..|.... ..|.|.+
T Consensus 78 ~~sL~I~~v~~~------D~G~Y~C~v~~~~~~~~~~~~~L~V~~ 116 (118)
T 3udw_C 78 NASLRMFGLRVE------DEGNYTCLFVTFPQGSRSVDIWLRVLA 116 (118)
T ss_dssp BCCEEECSCCGG------GCEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcEEEEeecChH------HCeEEEEEEEECCCCCccceEEEEEEe
Confidence 347999999766 99999999998 5554443 4454443
No 390
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.14 E-value=3.3e-06 Score=50.88 Aligned_cols=52 Identities=13% Similarity=0.110 Sum_probs=33.3
Q ss_pred CcEEEEEccCCeeeeccccceEEeeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
+|.+.| ++++..+..... .....+ +.|.|.++..+ |+|.|+|.|.|..+...
T Consensus 151 ~~~~~w-~~~~~~~~~~~~-~~~~~~~~~~~~s~L~i~~~~~~------d~g~YtC~a~N~~~~~~ 208 (225)
T 4fmk_A 151 PARITW-ISSLGGEAKDTQ-EPGIQAGTVTIISRYSLVPVGRA------DGVKVTCRVEHESFEEP 208 (225)
T ss_dssp CCEEEE-ECSSCCEEEEEE-EECSSTTCEEEEEEEEECCCGGG------TTCEEEEEEECTTCSSC
T ss_pred CCEEEE-EECCccccCCcc-eEEecCCCEEEEEEEEEeeCCHH------HCCEEEEEEEcCCCCeE
Confidence 367889 666655432111 111122 24889988666 99999999999876543
No 391
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.14 E-value=3.3e-06 Score=51.20 Aligned_cols=60 Identities=7% Similarity=0.043 Sum_probs=33.3
Q ss_pred CcEEEEEccC-CeeeeccccceE-EeeCCeEEe---cCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEE
Q psy11568 1 MYVLLWLIRD-NTVIAYVKDLRI-ALSNGSLMF---PPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVK 67 (116)
Q Consensus 1 ~p~v~W~~~~-g~~~~~~~~~~~-~~~~~~l~i---~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~ 67 (116)
.|.|+| +++ |..+........ ...++.+.+ ..+..+ |+|.|+|.|.|..|.... ..|.|.
T Consensus 145 ~p~i~W-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~------d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 145 KAEVIW-TSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTT------TNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp CCEEEE-EETTCCEECCEEEEEECC----CEEEEEEEEEECC------TTCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCeEEE-EECCCceecCccceEEEcCCCCCEEEEEEEEEecc------CCcEEEEEEEeCccceeeEEEEEec
Confidence 478999 665 766643211111 111222222 233333 999999999999987764 444444
No 392
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.12 E-value=1.7e-05 Score=45.13 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=27.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEEEe
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHVKA 68 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v~~ 68 (116)
.|.|.++..+ |+|.|.|.+.+..|.... ..|.|..
T Consensus 86 sL~I~~v~~~------D~G~Y~C~v~~~~~~~~~~~~L~V~~ 121 (139)
T 1pko_A 86 ALRIQNVRFS------DEGGYTCFFRDHSYQEEAAVELKVED 121 (139)
T ss_dssp EEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEccCCHH------HCEEEEEEEEcCCCceEEEEEEEEec
Confidence 6999999766 999999999998875443 4455543
No 393
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.12 E-value=2.2e-06 Score=47.36 Aligned_cols=35 Identities=37% Similarity=0.718 Sum_probs=31.0
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.++|+
T Consensus 10 P~i~~~p-~~~~v~~G~~v~L~C~~~g~P~p~v~W~ 44 (117)
T 2v9t_A 10 PRIVEHP-SDLIVSKGEPATLNCKAEGRPTPTIEWY 44 (117)
T ss_dssp EEEEECC-CCEEECTTCCEEECCEEEEESCCEEEEE
T ss_pred CeeEcCC-CCEEEcCCCcEEEEEECCccCCCeEEEE
Confidence 6666665 7788999999999999999999999997
No 394
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.12 E-value=6.4e-06 Score=49.08 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=31.9
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++|.++.. ..+.+|.+.. .+ |+|.|+|.|.|..+...+
T Consensus 129 ~p~i~W-~~~~~~l~~-------~~~~~l~~~~--~~------d~g~Y~C~a~N~~~~~~~ 173 (180)
T 2dru_A 129 DVELKL-YQGKEHLRS-------LRQKTMSYQW--TN------LRAPFKCKAVNRVSQESE 173 (180)
T ss_dssp TCEEEE-EETTEEEEE-------ESSSEEEEEC--SC------CSSCEEEEEEETTEEEEE
T ss_pred CCEEEE-EECCeECcC-------CCCCEEEEEE--hh------cCccEEEEEecCcCcccc
Confidence 478999 889887751 1233555522 33 999999999999876554
No 395
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.07 E-value=1e-05 Score=45.89 Aligned_cols=36 Identities=31% Similarity=0.520 Sum_probs=32.1
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+.
T Consensus 22 P~~~~~p-~~~~v~~G~~v~L~C~~~g~P~p~i~W~k 57 (137)
T 3qr2_A 22 AGFVQAP-LSQQRWVGGSVELHCEAVGSPVPEIQWWF 57 (137)
T ss_dssp CEEEECC-CCEEEETTSCEEEEEEEECSSCCEEEEEE
T ss_pred CeEEcCC-CCEEEeCCCCEEEEEEEeeecCCeEEEEE
Confidence 7777776 78899999999999999999999999973
No 396
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.07 E-value=6.7e-06 Score=43.86 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=30.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+.+.|.|.+.|.|.|.+.|+
T Consensus 6 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 40 (99)
T 1g1c_A 6 PKIFERI-QSQTVGQGSDAHFRVRVVGKPDPECEWY 40 (99)
T ss_dssp EEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred CceEecC-cceEEcCCCcEEEEEEEEEeCCCEEEEE
Confidence 6666665 7788999999999999999999999997
No 397
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.07 E-value=6.8e-06 Score=44.19 Aligned_cols=35 Identities=17% Similarity=0.356 Sum_probs=31.1
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 9 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~ 43 (103)
T 3qp3_A 9 PRITLRM-RSHRVPCGQNTRFILNVQSKPTAEVKWY 43 (103)
T ss_dssp EEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEE
T ss_pred CEEEeCC-cceEEeCCCeEEEEEEEEecCCCEEEEE
Confidence 6666665 7888999999999999999999999997
No 398
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.06 E-value=7.6e-06 Score=44.61 Aligned_cols=36 Identities=25% Similarity=0.641 Sum_probs=31.4
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+.+|+.+.|.|.+.|.|.|.++|+.
T Consensus 9 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k 44 (110)
T 2dm2_A 9 PFFEMKL-KHYKIFEGMPVTFTCRVAGNPKPKIYWFK 44 (110)
T ss_dssp CCBSSCC-CCEEEETTCCEEEEEEBCCSSCCEEEEEC
T ss_pred CEEEecC-cCeEEeCCCeEEEEEEEEecCCCEEEEEE
Confidence 6666655 77889999999999999999999999974
No 399
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.06 E-value=1.9e-05 Score=47.30 Aligned_cols=46 Identities=17% Similarity=0.085 Sum_probs=31.5
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR 62 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~ 62 (116)
.|.++| +++|..+. . ....+.+.. .. .|+|.|+|.|.|..|...+.
T Consensus 129 ~~~~~W-~~~g~~l~---~-----~~~~i~~~~-~~------~d~G~Y~C~a~N~~~~~~s~ 174 (182)
T 1hnf_A 129 DPELNL-YQDGKHLK---L-----SQRVITHKW-TT------SLSAKFKCTAGNKVSKESSV 174 (182)
T ss_dssp SCEEEE-EESSCEEE---E-----ESSCEEEEC-CS------CEEEEEEEEEECSSCEEEEE
T ss_pred CCEEEE-EECCEECC---C-----CCcEEEEec-cc------CCCcEEEEEEEeCCCCcEEc
Confidence 378999 88888772 1 222344332 22 39999999999999877653
No 400
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.05 E-value=8.1e-07 Score=53.75 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=33.9
Q ss_pred cEEEEEccCCeeeeccccceE-------EeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRI-------ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~-------~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
|.|+| +++|+++........ ....+.|.|.++..+ |+|.|+|.|.|..+.
T Consensus 145 ~~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 145 ATVTW-KANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWK------SHNRVSCQVTHEGET 201 (212)
T ss_dssp CEEEE-EETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHH------TCSCEEEEEECTTTT
T ss_pred cEEEE-EECCeEcCCCeecCCceecCCCceEEEEEEEchhhcC------CCCeEEEEEEeCCce
Confidence 68999 899998864211000 011134778888655 999999999998754
No 401
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.05 E-value=8.6e-06 Score=44.74 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=30.5
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 8 p~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~ 42 (114)
T 2cqv_A 8 PQIIQFP-EDQKVRAGESVELFGKVTGTQPITCTWM 42 (114)
T ss_dssp CEESCCC-CSEEEETTCCEEEEEEEESSSSCEEEEE
T ss_pred CEEEeCC-CCeEEeCCCeEEEEEEEEcCCCCEEEEE
Confidence 5555544 7889999999999999999999999997
No 402
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.05 E-value=8.4e-06 Score=43.47 Aligned_cols=35 Identities=23% Similarity=0.525 Sum_probs=30.5
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.+.|+
T Consensus 6 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 40 (99)
T 1u2h_A 6 PTFKVSL-MDQSVREGQDVIMSIRVQGEPKPVVSWL 40 (99)
T ss_dssp EEEEECC-CCEEEETTCCEEEEEEEEEESCCEEEEE
T ss_pred CEEEEcC-CceEecCCCEEEEEEEEEEcCCCEEEEE
Confidence 6666665 6778899999999999999999999997
No 403
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.04 E-value=7.2e-05 Score=47.75 Aligned_cols=44 Identities=11% Similarity=0.261 Sum_probs=31.3
Q ss_pred cEEEEEccCCeeeeccccceEEeeC--CeEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN--GSLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~--~~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
|.|.| ++||+.+... +.+ ...+ +.|.|.++.+. | |.|.|.+.+.
T Consensus 41 p~i~W-~~~g~~i~~~-~~~-~~~~~~~~L~i~~~~~~------~-g~Y~C~a~~~ 86 (303)
T 1i1r_A 41 NYIVW-KTNHFTIPKE-QYT-IINRTASSVTFTDIASL------N-IQLTCNILTF 86 (303)
T ss_dssp GGEEE-EETTEECCGG-GCE-EEETTEEEEEECSCCCS------E-EEEEEEEEET
T ss_pred hheEE-EECCEECChh-hee-eeCCcEEEEEEcCcCCC------c-eEEEEecccC
Confidence 78999 8999988532 222 2233 36999999543 4 9999999884
No 404
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.04 E-value=8.7e-06 Score=43.57 Aligned_cols=35 Identities=31% Similarity=0.671 Sum_probs=30.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.++|+
T Consensus 9 P~i~~~p-~~~~v~~G~~~~l~C~~~g~p~p~v~W~ 43 (100)
T 2edj_A 9 PIILQGP-ANQTLAVDGTALLKCKATGDPLPVISWL 43 (100)
T ss_dssp CEEEECC-CCEEEESSSEEEECCEEECSSCCEEEEE
T ss_pred CEEEeCc-CCEEEcCCCcEEEEEEEEEcCCCEEEEE
Confidence 6666665 7788899999999999999999999997
No 405
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.04 E-value=3.2e-06 Score=52.78 Aligned_cols=46 Identities=15% Similarity=0.293 Sum_probs=32.4
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
+.+.| +++|..+.. .......++.|.|.++..+ |+|.|+|.+.|..
T Consensus 130 ~~~~w-~k~g~~~~~--~~~~~~~~~~l~I~~v~~~------d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 130 SMFLL-LKEGRSSHV--QRGYGKVQAEFPLGPVTTA------HRGTYRCFGSYNN 175 (242)
T ss_dssp SEEEE-EECSSSCEE--EEEECSSEEEEEEEECCGG------GCEEEEEEEEEET
T ss_pred CEEEE-EECCCccCc--cccCCCceEEEEeCCCccc------cCEEEEEEEECCC
Confidence 57889 888876642 1111122347999999766 9999999999864
No 406
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.03 E-value=2.2e-06 Score=51.79 Aligned_cols=52 Identities=12% Similarity=0.194 Sum_probs=34.8
Q ss_pred cEEEEEccCCeeeecccc--ceEE-----eeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 2 YVLLWLIRDNTVIAYVKD--LRIA-----LSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~--~~~~-----~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
+.|+| ++||.++..... .... ...+.|.|.++..+ |+|.|+|.|.|..+...
T Consensus 146 ~~v~W-~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~~~ 204 (213)
T 3mj8_L 146 VAVTW-EADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWK------SRNTFICKVTHGGNTVE 204 (213)
T ss_dssp CEEEE-EETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHH------SCSCEEEEEEETTEEEE
T ss_pred eEEEE-EcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcC------CCCEEEEEEEECCccEE
Confidence 38999 999998863110 0011 11235888888655 99999999999985443
No 407
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.02 E-value=1.5e-05 Score=41.96 Aligned_cols=35 Identities=31% Similarity=0.552 Sum_probs=29.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+.+...| ....+.+|+.+.|.|.+.|.|.|.+.|+
T Consensus 4 ~~i~~~p-~~~~v~~G~~~~l~C~~~g~p~p~i~W~ 38 (91)
T 3bfo_A 4 LQICVEP-TSQKLMPGSTLVLQCVAVGSPIPHYQWF 38 (91)
T ss_dssp CEEEECC-CCEEECTTSCEEEECEEECSSCCEEEEE
T ss_pred eEEEECC-CccEecCCCcEEEEEEeccCCCCEEEEE
Confidence 4555555 6778899999999999999999999997
No 408
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.01 E-value=1.3e-05 Score=48.45 Aligned_cols=50 Identities=16% Similarity=0.227 Sum_probs=31.5
Q ss_pred cEEEEEccCCeeeeccccce------EEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLR------IALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~------~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
+.|+| +++|.++....... .......|.|.....+ |.|.|+|.|.|..+.
T Consensus 124 ~~i~W-~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d------~~g~ytC~A~n~~~~ 179 (202)
T 1vca_A 124 LEIDL-LKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIED------IGKVLVCRAKLHIDE 179 (202)
T ss_dssp EEEEE-EETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGG------TTCEEEEEEEECSCC
T ss_pred eEEEE-EeCCeECcccccccccCcCcceEEEEEEEEEeeecc------CCCeEEEEEEccccC
Confidence 37899 89998875321000 0111123566666444 899999999998765
No 409
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.00 E-value=1.9e-05 Score=48.20 Aligned_cols=54 Identities=15% Similarity=0.249 Sum_probs=34.3
Q ss_pred cEEEEEccCCeeeeccccceEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR 62 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~ 62 (116)
|.|+| +++|..+...........++ .|.|.....+ |+|.|+|.+.|..+.....
T Consensus 155 ~~v~W-~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~ytC~v~n~~~~~~~~ 214 (220)
T 2fbj_H 155 MNVTW-GKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECP------EGESVKCSVQHDSNPVQEL 214 (220)
T ss_dssp EEEEE-SCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSC------TTCEEEEEEEETTSCCEEE
T ss_pred EEEEE-ecCCEecceEecCceECCCCCEEEEEEEEECHHHcC------CCCeEEEEEEcCCCceEcC
Confidence 58999 88887652111111111222 3677666444 8999999999999877654
No 410
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.00 E-value=5.2e-06 Score=50.55 Aligned_cols=48 Identities=10% Similarity=0.234 Sum_probs=30.4
Q ss_pred CcEEEEEccCCeeeeccc----cceEE-----eeC------CeEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 1 MYVLLWLIRDNTVIAYVK----DLRIA-----LSN------GSLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~----~~~~~-----~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
.|.|+| +++|.++.... ..... ..+ +.|.|.....+ |+|.|+|.|.|.
T Consensus 149 ~p~i~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~d------d~g~Y~C~a~n~ 211 (231)
T 2pet_A 149 APKITW-YRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDD------RDASFHCAAHYS 211 (231)
T ss_dssp CCEEEE-EETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGG------GGCEEEEEEEEE
T ss_pred CCEEEE-EECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhh------CCceEEEEEEcC
Confidence 478999 99999886432 11111 111 34666644322 699999999995
No 411
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.00 E-value=1.1e-05 Score=43.97 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=30.4
Q ss_pred cEEEEEccCCeeeeccccceEEe--eCCeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIAL--SNGSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~--~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
+.+.| +++|..+.. .+... .+..|.|.+++++ |+|.|.|.+.|..
T Consensus 33 ~~~~w-~k~g~~~~~---~~~~~~~~~~~l~I~~v~~~------dsG~Y~C~~~n~~ 79 (105)
T 2vsd_A 33 AWVQL-WLNGTLRFD---KEKDKEQDAAEFSFAVTNLE------DAGTYQCRYQVSE 79 (105)
T ss_dssp EEEEE-EETTEEEEE---EEECTTCSEEEEEEECCSGG------GCEEEEEEEEEET
T ss_pred cEEEE-EECCcccee---eeccCCCCEEEEEECCCCHH------HCeEEEEEEEcCC
Confidence 35678 788876532 11111 1236899999766 9999999999864
No 412
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.00 E-value=7e-06 Score=45.47 Aligned_cols=35 Identities=26% Similarity=0.601 Sum_probs=31.5
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.|+..+ ....+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 16 p~f~~~p-~~~~v~~G~~v~L~C~~~g~p~p~v~W~ 50 (116)
T 2kkq_A 16 PMFIYKP-QSKKVLEGDSVKLECQISAIPPPKLFWK 50 (116)
T ss_dssp CCBSSCC-CCEEEETTEEEEEEEEBCCBSCCEEEEE
T ss_pred CeEEeCC-CcEEEeCCCcEEEEEEEeccCCCEEEEE
Confidence 6776666 7889999999999999999999999997
No 413
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.00 E-value=3.9e-05 Score=49.63 Aligned_cols=56 Identities=18% Similarity=0.218 Sum_probs=36.8
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE-EEEEEEEe
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL-SRFVHVKA 68 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~-~~~~~v~~ 68 (116)
|.|.| ++++..+. ....+....++.|.|.++.+. |+|.|+|.+ .|... +..|.|..
T Consensus 37 ~~i~W-~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~------d~G~Y~C~~---~g~~~~~~~L~V~~ 93 (325)
T 1n26_A 37 ATVHW-VLRKPAAG-SHPSRWAGMGRRLLLRSVQLH------DSGNYSCYR---AGRPAGTVHLLVDV 93 (325)
T ss_dssp SEEEE-EEECSSSS-CCCEEEEEESSEEEECSCCGG------GCEEEEEES---SSSCSCEEEEEECC
T ss_pred ceEEE-EECCccCC-ccccccccccceEEecccchh------hCeEeEEEe---CCEEeeeEEEEecc
Confidence 68999 66665442 112234456789999999766 999999993 45444 35555543
No 414
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.99 E-value=7.8e-06 Score=43.67 Aligned_cols=35 Identities=29% Similarity=0.589 Sum_probs=30.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 12 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 46 (99)
T 2yr3_A 12 PSFSSVL-KDCAVIEGQDFVLQCSVRGTPVPRITWL 46 (99)
T ss_dssp EEEEECC-CCEEECTTCCEEEECEEEEESCCCCEEE
T ss_pred CceeecC-CCCEEeCCCeEEEEEEEeeeCCCeEEEE
Confidence 6666665 7788999999999999999999999997
No 415
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=97.98 E-value=1.1e-05 Score=45.87 Aligned_cols=24 Identities=13% Similarity=0.380 Sum_probs=20.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|.|.++..+ |+|.|.|.+.|..|
T Consensus 78 ~L~I~~~~~~------DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 78 TLTIQNIQYE------DNGIYFCKQKCDSA 101 (133)
T ss_dssp EEEECSCCGG------GCEEEEEEESSCC-
T ss_pred EEEECCCChH------HCEEEEEEEEeCCC
Confidence 5999999766 99999999999875
No 416
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.97 E-value=7.9e-06 Score=44.47 Aligned_cols=36 Identities=31% Similarity=0.672 Sum_probs=32.0
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+.
T Consensus 10 P~i~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~ 45 (110)
T 2dm3_A 10 PHFLQAP-GDLTVQEGKLCRMDCKVSGLPTPDLSWQL 45 (110)
T ss_dssp CEEEECC-CEEEEESSSCBCCEEEEECSSCCEEECBB
T ss_pred CcEEeCC-CcEEEeCCCEEEEEEEEEEcCCCEEEEEE
Confidence 7777766 78899999999999999999999999973
No 417
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=97.95 E-value=8.1e-06 Score=43.60 Aligned_cols=35 Identities=26% Similarity=0.544 Sum_probs=30.1
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.++|+
T Consensus 6 P~~~~~p-~~~~~~~G~~~~l~C~~~g~p~p~v~W~ 40 (100)
T 2kdg_A 6 PRFIQVP-ENMSIDEGRFCRMDFKVSGLPAPDVSWY 40 (100)
T ss_dssp EECCCCC-CCEEEETTCCEEEEEECEEESCCEEEEE
T ss_pred CeEEeCC-CCEEecCCCEEEEEEEEEeeCCCEEEEE
Confidence 5555555 7788899999999999999999999997
No 418
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=97.94 E-value=1.7e-05 Score=42.22 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=30.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.+.|+
T Consensus 7 P~i~~~~-~~~~v~~G~~~~l~C~~~g~p~p~v~W~ 41 (99)
T 3puc_A 7 PVIVTGL-QDTTVSSDSVAKFAVKATGEPRPTAIWT 41 (99)
T ss_dssp EEEEECC-CCEEEESSSCEEEEEEEEEESCCEEEEE
T ss_pred CEEEecC-ccEEEeCCCcEEEEEEEEecCCCEEEEE
Confidence 6666665 7788999999999999999999999997
No 419
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=97.94 E-value=7e-06 Score=44.74 Aligned_cols=36 Identities=22% Similarity=0.601 Sum_probs=31.7
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...| ....+.+|+++.|.|.+.|.|.|.+.|+.
T Consensus 15 ~~i~~~p-~~~~v~~G~~v~L~C~~~g~p~p~v~W~k 50 (106)
T 1nct_A 15 ARILTKP-RSMTVYEGESARFSCDTDGEPVPTVTWLR 50 (106)
T ss_dssp CEEEECC-CCEEESSSSCEECCEEEECSSCCBCCBCS
T ss_pred CEEEECC-CCEEEeCCCcEEEEEEEEEcCCCEEEEEE
Confidence 6666666 78899999999999999999999999973
No 420
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.93 E-value=1.2e-05 Score=44.39 Aligned_cols=36 Identities=8% Similarity=0.241 Sum_probs=30.5
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
+.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+.
T Consensus 14 ~~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~k 49 (115)
T 2cr6_A 14 VHIIEDL-EDVDVQEGSSATFRCRISPANYEPVHWFL 49 (115)
T ss_dssp CEEEECC-CEEEEETTSCEECCCEEESTTCCSCEEEE
T ss_pred CeEeccC-ccEEEeCCCcEEEEEEEcCCCCCccEEEE
Confidence 3454555 88899999999999999999999999973
No 421
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=97.93 E-value=1.7e-05 Score=44.62 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=26.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE-EEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS-RFVHV 66 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~-~~~~v 66 (116)
+|.|.+++.+ |+|.|.|.+.|..|.... ..|.|
T Consensus 85 sL~I~~v~~~------D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 85 SLRLKNVQLT------DAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp CEEESSCCGG------GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEEECCCChH------HCEEEEEEEEeCCCeEEEEEEEEE
Confidence 6999999766 999999999999877664 44444
No 422
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=97.93 E-value=1.6e-05 Score=49.95 Aligned_cols=57 Identities=14% Similarity=0.212 Sum_probs=26.9
Q ss_pred CCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 42 DVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 42 ~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+.|.+.|.|.+.|..|..... . ...+...+ ....+.+|+++.|.|.+.+ +.+.+.|+
T Consensus 5 ~~~~~~y~~~~~~~~g~~~~~-------~--------~~~v~~~p-~~v~v~~G~~v~L~C~~~~-~~~~v~W~ 61 (270)
T 3qib_D 5 RADLIAYLKQATKGGGGSGGG-------G--------GMKVIQTP-RYLVKGQGQKAKMRCIPEK-GHPVVFWY 61 (270)
T ss_dssp --------------------------------------CCCEEEC-SEEEEETTSCEEEEEECCT-TCCEEEEE
T ss_pred hhhHHHHHHHHhccCCccccc-------c--------ceeEEeCC-CeEEEcCCCCEEEEEEecC-CCceEEEE
Confidence 559999999999987644321 0 13444444 7788899999999999866 78899996
No 423
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=97.93 E-value=3.4e-06 Score=50.92 Aligned_cols=49 Identities=12% Similarity=0.158 Sum_probs=33.6
Q ss_pred EEEEEccCCeeeecc-cc-ceEE-e------eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 3 VLLWLIRDNTVIAYV-KD-LRIA-L------SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~-~~-~~~~-~------~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
.|+| +++|.++... .. .... . ..+.|.|.++..+ |+|.|+|.|.|....
T Consensus 145 ~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~ 202 (213)
T 3d9a_L 145 NVKW-KIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKTST 202 (213)
T ss_dssp EEEE-EETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------HCCEEEEEEECTTCS
T ss_pred EEEE-EcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccC------CCCEEEEEEEEccCC
Confidence 7999 8899987642 00 0000 0 1127889999665 999999999998643
No 424
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=97.92 E-value=8.8e-05 Score=40.36 Aligned_cols=29 Identities=10% Similarity=0.199 Sum_probs=23.8
Q ss_pred CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 26 NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 26 ~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
+.+|.|.++..+ |+|.|.|.+.+..+...
T Consensus 68 ~~sL~I~~v~~~------D~G~Y~C~v~~~~~~~~ 96 (110)
T 1ncn_A 68 SWTLRLHNLQIK------DKGLYQCIIHHKKPTGM 96 (110)
T ss_dssp TTEEEECSCCGG------GCEEEEEEEEEECSSSE
T ss_pred CEEEEEcCCChH------HCEEEEEEEEcCCCCce
Confidence 458999999766 99999999998866543
No 425
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=97.92 E-value=2.9e-05 Score=49.84 Aligned_cols=49 Identities=8% Similarity=0.010 Sum_probs=33.3
Q ss_pred cEEEEEccCCeeeeccccceEEeeC---CeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSN---GSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~---~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
|.|.| ++||+.+... +.+....+ +.|.|.++.+. |+|.|.|.+.+..+.
T Consensus 35 ~~i~W-~~~g~~l~~~-~~~~~~~~~~~~~L~i~~~~~~------d~g~y~c~~~~~~~~ 86 (313)
T 2d9q_B 35 PQILW-RLGAELQPGG-RQQRLSDGTQESIITLPHLNHT------QAFLSCSLNWGNSLQ 86 (313)
T ss_dssp SCCEE-ESSSCBCTTC-EECCCSSSCCCEEEEESCCCSS------EEEEEEEEESSSSEE
T ss_pred cceEE-EeCCEECCcc-ceEEEecCeEEEEEEEeccCCC------ccceEEeeecCCCce
Confidence 77899 8999877421 11111222 35999999665 999999998765443
No 426
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=97.91 E-value=3.9e-05 Score=42.10 Aligned_cols=24 Identities=25% Similarity=0.354 Sum_probs=21.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|.|.++..+ |+|.|.|.+.|..|
T Consensus 72 ~L~I~~v~~~------DsG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 72 TLHIRDAQLE------DSGTYFCAAEASSG 95 (113)
T ss_dssp EEEECSCCGG------GCEEEEEEEECSSS
T ss_pred EEEECCCChh------hCEEEEEEEecCCC
Confidence 7999999766 99999999999865
No 427
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=97.91 E-value=1.2e-05 Score=50.77 Aligned_cols=20 Identities=10% Similarity=0.374 Sum_probs=17.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRAS 53 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~ 53 (116)
.|.|.++..+ |+|.|.|.+.
T Consensus 103 sL~I~~v~~~------DsG~Y~C~~~ 122 (267)
T 3u1s_H 103 YMELRGLTAD------DTAIYYCLTG 122 (267)
T ss_dssp EEEECSCCGG------GCEEEEEEEE
T ss_pred EEEECCCChh------hCEEEEEEEC
Confidence 4999999766 9999999986
No 428
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=97.91 E-value=3e-05 Score=43.63 Aligned_cols=24 Identities=13% Similarity=0.242 Sum_probs=20.9
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
..|.|.++..+ |+|.|.|.+.+..
T Consensus 92 ~sL~I~~v~~~------D~G~Y~C~v~~~~ 115 (135)
T 1xt5_A 92 PTLRLTHVHPQ------DGGRYWCQVAQWS 115 (135)
T ss_dssp CCEEECSCCGG------GCEEEEEEEECSS
T ss_pred CeEEECCCChh------hCcEEEEEEEcCC
Confidence 57999999766 9999999999864
No 429
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=97.90 E-value=9e-06 Score=48.04 Aligned_cols=45 Identities=9% Similarity=0.138 Sum_probs=31.0
Q ss_pred CcEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 1 MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
.|.++| +++|..+.... ...+.+.. . .|+|.|+|.|.|..|...+
T Consensus 119 ~p~i~W-~~~~~~l~~~~-------~~~l~~~~--~------~~~g~Y~C~a~N~~~~~~~ 163 (171)
T 1ccz_A 119 DVELKL-YQGKEHLRSLR-------QKTMSYQW--T------NLRAPFKCKAVNRVSQESE 163 (171)
T ss_dssp SCEEEE-EETTEEEEEES-------SSEEEEEC--S------CCSSCEEEEEEETTEEEEE
T ss_pred CcEEEE-EECCEECcCCc-------ceEEEEec--c------CCCceEEEEEEcccCcccc
Confidence 378999 88998876321 12333332 2 3899999999999977553
No 430
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.88 E-value=1.6e-05 Score=43.87 Aligned_cols=35 Identities=34% Similarity=0.630 Sum_probs=30.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.+.|+
T Consensus 9 P~i~~~p-~~~~v~~G~~v~l~C~~~g~p~p~i~W~ 43 (118)
T 2eo9_A 9 PVIRQGP-VNQTVAVDGTFVLSCVATGSPVPTILWR 43 (118)
T ss_dssp CCCSBCC-CCEEEETTCEEEEECBCCCSSCCEEEEE
T ss_pred CEEEcCC-CCEEEcCCCeEEEEEEEEecCCCEEEEE
Confidence 6665555 7788999999999999999999999997
No 431
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=97.88 E-value=2.4e-05 Score=42.20 Aligned_cols=35 Identities=26% Similarity=0.553 Sum_probs=31.0
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 14 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~ 48 (107)
T 3irg_B 14 PCFLRFP-RPVRVVSGAEAELKCVVLGEPPPVVVWE 48 (107)
T ss_dssp EEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEE
T ss_pred CeeEcCC-ccEEEeCCCeEEEEEEEeecCCCEEEEE
Confidence 6666665 7788999999999999999999999997
No 432
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=97.87 E-value=1.3e-05 Score=43.38 Aligned_cols=35 Identities=26% Similarity=0.463 Sum_probs=26.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.+.|+
T Consensus 11 P~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~i~W~ 45 (108)
T 3kvq_A 11 PTITGNL-ENQTTSIGESIEVSCTASGNPPPQIMWF 45 (108)
T ss_dssp CCCBSCC-CCEEEETTCCEEEECBCC----CCEEEE
T ss_pred CceecCC-CCeEEeCCCeEEEEEECcCcCCCeEEEE
Confidence 6665555 7788999999999999999999999997
No 433
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.87 E-value=1.7e-05 Score=42.22 Aligned_cols=35 Identities=26% Similarity=0.549 Sum_probs=29.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+
T Consensus 6 P~i~~~~-~~~~~~~G~~~~l~C~~~g~p~p~v~W~ 40 (100)
T 3irg_A 6 PKIEALP-SDISIDEGKVLTVACAFTGEPTPEVTWS 40 (100)
T ss_dssp EEECCCC-SEEEEETTSEEEEEEEEEEESCCEEEEE
T ss_pred CeeecCC-CcEEEcCCCcEEEEEEEEEcCCCceEEE
Confidence 4454444 7888999999999999999999999997
No 434
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.87 E-value=1.7e-05 Score=44.94 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=30.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCc---CCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGS---PTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~---P~p~i~W~ 115 (116)
+.|+..| ....+.+|+.+.|.|.+.|. |.|.+.|+
T Consensus 8 ~~F~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~ 45 (126)
T 2dav_A 8 ILFIEKP-QGGTVKVGEDITFIAKVKAEDLLRKPTIKWF 45 (126)
T ss_dssp CSCCSCC-CCCEEETTCCEEEEEEEECCCSSSCCEEEEE
T ss_pred cEEEEcC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEe
Confidence 6677777 88899999999999999875 89999996
No 435
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=97.86 E-value=3.7e-05 Score=40.83 Aligned_cols=31 Identities=6% Similarity=0.150 Sum_probs=27.5
Q ss_pred cCCCeEEEeCCCcEEEEeeecCc-CCceeEEe
Q psy11568 85 EPPYRFEFSNESGGRLDCAAQGS-PTPKIEWL 115 (116)
Q Consensus 85 ~~~~~~~~~~g~~~~l~C~~~g~-P~p~i~W~ 115 (116)
.++....+.+|+++.|.|.+.|. |.|.+.|+
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~ 37 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQSTQVTWY 37 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCTTCEEEEE
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCCCCEEEEE
Confidence 34478889999999999999997 99999997
No 436
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.08 E-value=2e-06 Score=51.85 Aligned_cols=71 Identities=17% Similarity=0.071 Sum_probs=41.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC-CceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA-GVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~-g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.|.|.++..+ |+|.|.|.+.+.. .......|.|... .... .|.+....+. ...+.|.|.+.|
T Consensus 73 sL~I~~v~~~------DsG~Y~C~~~~~~~~fg~gT~L~V~~~----~~~~-~P~V~~~~~~------~~~vtL~C~~~g 135 (185)
T 3c6l_A 73 SLHIADSQPG------DSATYFCAASDNRIFFGDGTQLVVKPN----IQNP-EPAVYQLKDP------RSQDSTLCLFTD 135 (185)
Confidence 6999999766 9999999987621 0111123333321 0000 1333222211 127899999988
Q ss_pred -cCCceeEEe
Q psy11568 107 -SPTPKIEWL 115 (116)
Q Consensus 107 -~P~p~i~W~ 115 (116)
.|.|.++|.
T Consensus 136 f~P~p~v~~~ 145 (185)
T 3c6l_A 136 FDSQINVPKT 145 (185)
Confidence 699999994
No 437
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=97.84 E-value=1.7e-05 Score=47.71 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=30.8
Q ss_pred cEEEEEccCCeeeeccccceEEee----CCeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~----~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
|.+.| +++|..+..... ..... ++.|.|.++. |+|.|+|.|.+..
T Consensus 136 ~~~~w-~k~g~~~~~~~~-~~~~~~~~~~~~L~i~~v~--------d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 136 DMYHL-SREGEAHERRLP-AGPKVNGTFQADFPLGPAT--------HGGTYRCFGSFHD 184 (201)
T ss_dssp SEEEE-EETTCSSCEEEE-CEEEETTEEEEEEEEEECC--------SCEEEEEEEEETT
T ss_pred ceEEE-EECCcccCcccc-cccccCCceEEEEEeCCcC--------CCeeEEEEEEcCC
Confidence 67899 888877643111 11111 3479999993 8999999998764
No 438
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=97.83 E-value=4.6e-05 Score=40.53 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=29.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeec-CcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQ-GSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~-g~P~p~i~W~ 115 (116)
+.+....+....+.+|+++.|.|.+. +.|.|.++|+
T Consensus 10 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~ 46 (98)
T 1gl4_B 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWT 46 (98)
T ss_dssp EEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEE
T ss_pred cEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEE
Confidence 44445555778899999999999998 7899999997
No 439
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=97.82 E-value=8.8e-05 Score=40.29 Aligned_cols=23 Identities=22% Similarity=0.444 Sum_probs=20.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|.|.++..+ |+|.|.|.+.|..
T Consensus 72 ~L~I~~v~~~------DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 72 TLTISSLEPE------DFAMYICQQHNEY 94 (108)
T ss_dssp EEEECSCCTT------CCSEEEEEECSSS
T ss_pred EEEECCCCHH------HCEEEEEEEccCC
Confidence 6999999766 9999999999974
No 440
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.82 E-value=0.00017 Score=44.59 Aligned_cols=22 Identities=18% Similarity=0.224 Sum_probs=19.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
.|.|.++..+ |+|.|.|.+.+.
T Consensus 76 sL~I~~v~~~------Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 76 VLKILAPSER------DEGSYYCACDTL 97 (229)
T ss_dssp EEEESSCCGG------GCEEEEEEEECC
T ss_pred EEEECcCCHh------HCeEEEEEEecC
Confidence 6999999766 999999999876
No 441
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=97.81 E-value=5.4e-05 Score=53.92 Aligned_cols=83 Identities=19% Similarity=0.114 Sum_probs=50.1
Q ss_pred cEEE-EEc--cCCeeeeccccceEEee----CCeEEecCCCCCCCCCCCCceEEEEEEEcCCCc-eEE-EEEEEEeCcEe
Q psy11568 2 YVLL-WLI--RDNTVIAYVKDLRIALS----NGSLMFPPFPETGFRPDVHSTVYRCRASNEAGV-ILS-RFVHVKAGSVV 72 (116)
Q Consensus 2 p~v~-W~~--~~g~~~~~~~~~~~~~~----~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~-~~~-~~~~v~~~~~~ 72 (116)
|.|. | + +||+.+.... ..... .+.|.|.++.+. |+|.|+|.|.|..|. ... ..|.|..+
T Consensus 194 p~i~~W-~~~~~g~~l~~~~--~~~~~~~~~~~~l~I~~~~~~------d~g~Y~c~A~n~~G~~~s~~~~l~V~~~--- 261 (731)
T 2v5y_A 194 AGDRLW-LQGIDVRDAPLKE--IKVTSSRRFIASFNVVNTTKR------DAGKYRCMIRTEGGVGISNYAELVVKEP--- 261 (731)
T ss_dssp TTCEEE-EEESSSCCEEEEE--EEECCSSEEEEEEEECSCCTT------TCEEEEEEEEETTEEEECCCEEEEEECC---
T ss_pred CceeEE-EecCCCccccccc--eEEeccccceEEEEEcccccc------cCeEEEEEEECCCCCcceeeEEEEEecC---
Confidence 5677 7 6 7888775311 11111 247999999665 999999999999987 332 44555543
Q ss_pred eeeccCCCceEecCCCeEEEeCCCcEEEEeeec
Q psy11568 73 SLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQ 105 (116)
Q Consensus 73 ~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~ 105 (116)
|.....+ ... ......+.+.|...
T Consensus 262 -------P~~~~~p-~~~-~~~~~~v~l~w~~~ 285 (731)
T 2v5y_A 262 -------PVPIAPP-QLA-SVGATYLWIQLNAN 285 (731)
T ss_dssp -------CCBSSCC-EEE-EECSSCEEEECCCS
T ss_pred -------CCCCCCc-cee-ccCCceEEEEeCCc
Confidence 3221121 222 23456777777653
No 442
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=97.81 E-value=1.9e-05 Score=42.16 Aligned_cols=36 Identities=22% Similarity=0.561 Sum_probs=29.4
Q ss_pred CceEecC---CCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEP---PYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~---~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.|...+ +....+..|+.+.|.|.+.|.|.|.++|+
T Consensus 5 P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~ 43 (100)
T 3caf_A 5 PYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWL 43 (100)
T ss_dssp EEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEE
T ss_pred CEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEE
Confidence 5554433 35677889999999999999999999997
No 443
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.80 E-value=1.4e-05 Score=45.91 Aligned_cols=30 Identities=27% Similarity=0.491 Sum_probs=27.6
Q ss_pred CCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 87 PYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 87 ~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
+....+.+|+++.|.|.+.|.|.|.++|+.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k 54 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQK 54 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEE
Confidence 478899999999999999999999999973
No 444
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=97.80 E-value=5.6e-05 Score=46.65 Aligned_cols=27 Identities=15% Similarity=0.282 Sum_probs=22.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
.|.|.++..+ |+|.|.|.+.|..+...
T Consensus 206 ~L~I~~v~~~------D~G~Y~C~a~~~~~~~~ 232 (247)
T 2ghw_B 206 TLTISRLEPE------DFAVYYCQQRSNWPPTF 232 (247)
T ss_dssp EEEECSCCGG------GCEEEEEEECSSSSCEE
T ss_pred EEEECcCCHH------HCEEEEEEEccCCCceE
Confidence 5999999766 99999999998654433
No 445
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.78 E-value=1e-05 Score=48.84 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=32.5
Q ss_pred EEEEEccCCeeeecc-cc-ceEE-eeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 3 VLLWLIRDNTVIAYV-KD-LRIA-LSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~-~~-~~~~-~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|+| ++||+++... .. .... ..++ .|.|.++..+ |+|.|+|.|.|...
T Consensus 144 ~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 144 SVKW-KIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYE------SHNLYTCEVVHKTS 200 (210)
T ss_dssp EEEE-EETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEECTTC
T ss_pred EEEE-EeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhc------cCCcEEEEEEecCC
Confidence 7999 8999987632 00 0011 1122 5888888655 99999999999854
No 446
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=97.78 E-value=1.7e-05 Score=47.80 Aligned_cols=46 Identities=13% Similarity=0.114 Sum_probs=30.9
Q ss_pred CcEEEEEccCCeeeeccc---------cceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEE
Q psy11568 1 MYVLLWLIRDNTVIAYVK---------DLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRAS 53 (116)
Q Consensus 1 ~p~v~W~~~~g~~~~~~~---------~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~ 53 (116)
.|.|+| +++|.++.... ........+.|.|.++..+ |+|.|+|.|.
T Consensus 144 ~~~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~Y~C~a~ 198 (213)
T 3nl4_L 144 DVTVTW-EVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYN------SHKEYTCKVT 198 (213)
T ss_dssp CCEEEE-EETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEE
T ss_pred CcEEEE-EeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcC------CCCeEEEEEE
Confidence 478999 89998875311 0001111235888888655 9999999999
No 447
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.77 E-value=1.7e-05 Score=48.51 Aligned_cols=49 Identities=18% Similarity=0.323 Sum_probs=32.0
Q ss_pred EEEEEccCCeeeeccccc-eEE-eeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 3 VLLWLIRDNTVIAYVKDL-RIA-LSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~-~~~-~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
.|+| ++||+++...... ... ..+ ..|.|.++..+ |+|.|+|.+.|..+.
T Consensus 168 ~v~W-~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~G~Y~C~a~n~~~~ 224 (234)
T 2j6e_L 168 TVAW-KADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWK------SHRSYSCQVTHEGST 224 (234)
T ss_dssp EEEE-EETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTT------TSCCEEEEEEBTTBC
T ss_pred EEEE-EECCEECCCCccccCceECCCCCEEEEEEEEECHHHcC------CCCeEEEEEEeCCCc
Confidence 7999 8899987532100 000 111 24777777544 999999999998754
No 448
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=97.77 E-value=4.1e-05 Score=44.34 Aligned_cols=36 Identities=31% Similarity=0.718 Sum_probs=31.2
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+..|+++.|.|.+.|.|.|.++|+.
T Consensus 42 P~~~~~~-~~~~v~~G~~v~L~C~~~g~P~p~v~W~k 77 (154)
T 1fhg_A 42 PYFTKTI-LDMEVVEGSAARFDCKVEGYPDPEVMWFK 77 (154)
T ss_dssp EEEEECC-CCEEEETTSCEEEEEEEEEESCCEEEEEE
T ss_pred CeEEccC-CcEEEeCCCeEEEEEEEEEecCCEEEEEE
Confidence 6666665 67889999999999999999999999973
No 449
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=97.75 E-value=8e-05 Score=39.61 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=28.7
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.|...+ .+..+.+|+++.|.|.+.+ |.|.+.|+.
T Consensus 6 ~~~~~~~-~~~~v~~G~~v~l~C~v~~-~~~~v~W~k 40 (93)
T 1waa_A 6 IEVEKPL-YGVEVFVGETAHFEIELSE-PDVHGQWKL 40 (93)
T ss_dssp CCEEECC-CCEEEETTSCEEEEEEESS-SSCCCEEEE
T ss_pred cEeeccC-cceEEeCCCCEEEEEEECC-CCCeEEEEE
Confidence 5665555 8889999999999999986 558899973
No 450
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=97.73 E-value=5.6e-05 Score=40.65 Aligned_cols=35 Identities=9% Similarity=0.116 Sum_probs=30.2
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.+.|.|.+.|+
T Consensus 7 p~~~~~~-~~~~v~~G~~v~L~C~~~~~~~~~v~W~ 41 (108)
T 3m45_A 7 QGQFPLT-QNVTVVEGGTAILTCRVDQNDNTSLQWS 41 (108)
T ss_dssp -CCCEEC-CCEEEETTSCEEEEEEESSCSSCCEEEE
T ss_pred CCccccC-CeeEEEeCCcEEEEeEEcCCCccEEEEE
Confidence 6666666 7889999999999999999999999996
No 451
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=97.73 E-value=0.00016 Score=40.39 Aligned_cols=27 Identities=15% Similarity=0.321 Sum_probs=21.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEc-CCCceE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASN-EAGVIL 60 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n-~~g~~~ 60 (116)
.|.|.+++.+ |+|.|.|...+ ..|...
T Consensus 94 sL~I~~v~~~------D~G~Y~C~v~~~~~g~~~ 121 (128)
T 3r0n_A 94 TLALHGLTVE------DEGNYTCEFATFPKGSVR 121 (128)
T ss_dssp CEEECSCCGG------GCEEEEEEEEEETTEEEE
T ss_pred EEEEccCCch------hCeEEEEEEEeCCCCCcc
Confidence 7999999766 99999998655 445444
No 452
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.72 E-value=7.7e-06 Score=49.35 Aligned_cols=52 Identities=17% Similarity=0.286 Sum_probs=33.7
Q ss_pred cEEEEEccCCeeeecccc-ce-EEeeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 2 YVLLWLIRDNTVIAYVKD-LR-IALSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~-~~-~~~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
|.++| ++||.++..... .. ....+ ..|.|..+..+ |+|.|+|.+.|..+...
T Consensus 143 ~~v~W-~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~Y~C~v~~~~~~~~ 202 (211)
T 3tv3_L 143 VTVAW-KADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWK------SHRSYSCQVTHEGSTVE 202 (211)
T ss_dssp CEEEE-EETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHH------HSSCEEEEEEETTEEEE
T ss_pred eEEEE-EECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhC------CCCeEEEEEEECCCCEE
Confidence 68999 899998853111 00 11111 24777777544 89999999999875443
No 453
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=97.71 E-value=4.4e-05 Score=41.02 Aligned_cols=34 Identities=18% Similarity=0.405 Sum_probs=29.2
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.+.|.| +.|+
T Consensus 9 p~~~~~~-~~~~v~~G~~v~l~C~~~~~p~~-v~W~ 42 (103)
T 2e7b_A 9 VRFQEAL-KDLEVLEGGAATLRCVLSSVAAP-VKWC 42 (103)
T ss_dssp CCCTBCC-CCEEEESSSCEEEEEECSSCCCS-CEEE
T ss_pred CEEEecC-ccEEEECCCcEEEEEEEeCCCCC-eEEE
Confidence 5555554 77899999999999999999999 9997
No 454
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=97.71 E-value=1.9e-05 Score=47.81 Aligned_cols=48 Identities=15% Similarity=0.229 Sum_probs=31.8
Q ss_pred EEEEEccCCeeeeccccce--EE-eeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 3 VLLWLIRDNTVIAYVKDLR--IA-LSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~~--~~-~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|+| +++|+++....... .. ..++ .|.|..+..+ |+|.|+|.+.|...
T Consensus 147 ~v~W-~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~ 203 (216)
T 2xzc_L 147 KVQW-KVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYE------KHKVYACEVTHQGL 203 (216)
T ss_dssp EEEE-EETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHT------TCCEEEEEEECTTC
T ss_pred EEEE-EECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhC------CCCcEEEEEEcCCC
Confidence 7999 89999875320000 01 1112 5778777555 99999999999863
No 455
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.70 E-value=0.00013 Score=45.56 Aligned_cols=26 Identities=15% Similarity=0.223 Sum_probs=21.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
.|.|.++..+ |+|.|.|.+.|.....
T Consensus 197 ~L~I~~v~~~------DsG~Y~C~a~~~~~~~ 222 (256)
T 1nqb_A 197 TLKISRVEAE------DLGVYYCFQGSHVPYT 222 (256)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCE
T ss_pred EEEECCCChH------HCEEEEEEEccCCceE
Confidence 6999999766 9999999999865433
No 456
>1xiw_B T-cell surface glycoprotein CD3 delta chain; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=97.70 E-value=3.3e-05 Score=40.15 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=27.2
Q ss_pred cEEEEEccCCeeeeccccceEEeeCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~~~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
+.|+| ++++..+... .+.+|.|.+...+ ++|.|.|.+.+..+...+
T Consensus 18 ~~i~W-~k~~~~i~~~-------~~~tL~L~~~~~d------~sG~Y~C~~~~~~~~~~s 63 (79)
T 1xiw_B 18 TSITW-VEGTVGTLLS-------DITRLDLGKRILD------PRGIYRCNGTDIYKDKES 63 (79)
T ss_dssp SCEEE-EEECCCEEEG-------GGTEEEEEEGGGC------CEEEEEEC--------CE
T ss_pred CCEEE-EECCcccccc-------cCCeEEeccCcCC------CCeEEEecCCCCCCcccE
Confidence 56899 8888766421 2457888777655 899999999998875443
No 457
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=97.70 E-value=3.3e-05 Score=40.99 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=28.6
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.+...+ ....+.+|+++.|.|.+.|.| |.+.|+.
T Consensus 10 p~~~~~~-~~~~v~~G~~v~l~C~~~g~p-p~i~W~k 44 (95)
T 2ckn_A 10 WGVPVEV-ESLLVHPGDLLQLRCRLRDDV-QSINWLR 44 (95)
T ss_dssp CCBTTBB-CCEEECTTSCEEEECCEESSC-CEEEEEB
T ss_pred CEEEcCc-ceEEEcCCCeEEEEEECCCCC-CceEEEE
Confidence 4444444 778899999999999999998 8999973
No 458
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=97.70 E-value=4.1e-05 Score=46.54 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=32.8
Q ss_pred c-EEEEEccCCeeeeccccceEEeeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 2 Y-VLLWLIRDNTVIAYVKDLRIALSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 2 p-~v~W~~~~g~~~~~~~~~~~~~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
| .|+| +++|..+... .......+ +.|.|.++..+ | |.|+|.|.|..|...
T Consensus 158 p~~v~W-~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~------d-g~y~C~a~n~~~~~~ 214 (222)
T 1q9r_B 158 PVTVTW-NSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWP------S-ETVTCNVAHPASSTK 214 (222)
T ss_dssp CCEEEE-GGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTT------T-SCCEEEEEEGGGTEE
T ss_pred CCEEEE-ecCCeEcceE-eccccccCCcEEEEEEEEECchhcC------C-CeEEEEEEccCCCCc
Confidence 5 8999 8898765321 11111122 25788877544 8 999999999987544
No 459
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=97.70 E-value=0.00021 Score=39.07 Aligned_cols=25 Identities=28% Similarity=0.327 Sum_probs=21.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
.|.|.++..+ |+|.|.|.+.+..+.
T Consensus 74 sL~I~~v~~~------DsG~Y~C~v~~~~~~ 98 (116)
T 2or8_A 74 SLTIENSVES------DSGLYCCRVEIPGWF 98 (116)
T ss_dssp CEEESSCCGG------GCEEEEEEECCSSTT
T ss_pred EEEECCCCcc------cCEEEEEEEEcCCcc
Confidence 6999999766 999999999987543
No 460
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.69 E-value=2.5e-05 Score=47.09 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=31.6
Q ss_pred EEEEEccCCeeeeccccc-e-EEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 3 VLLWLIRDNTVIAYVKDL-R-IALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~-~-~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
.|+| ++||+++...... . ....++ .|.|.....+ |+|.|+|.+.|...
T Consensus 148 ~v~W-~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 148 TVDW-KVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWE------RHSSYSCQVTHEGH 203 (212)
T ss_dssp EEEE-EETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHT------TCCEEEEEEEETTE
T ss_pred EEEE-EECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHcc------CCCcEEEEEEeCCc
Confidence 7999 8899988632110 0 111122 4777777544 89999999999864
No 461
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=5e-05 Score=41.88 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=26.8
Q ss_pred CCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 87 PYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 87 ~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.....+.+|+.+.|.|.+.|.|.|.++|+
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P~p~i~W~ 59 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKPRPQVVWT 59 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEESCCEEEEE
T ss_pred CCCEEEECCCEEEEEEEEccCCCCEEEEE
Confidence 46788899999999999999999999997
No 462
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=97.69 E-value=0.00015 Score=50.37 Aligned_cols=100 Identities=18% Similarity=0.272 Sum_probs=52.6
Q ss_pred cEEEEEccCCeeeeccccc-eEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCce-EEEEEEEEeCcEee
Q psy11568 2 YVLLWLIRDNTVIAYVKDL-RIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI-LSRFVHVKAGSVVS 73 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~-~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~-~~~~~~v~~~~~~~ 73 (116)
..|+| +++++.+...... .....++ .|.|..... .|.+.|+|.+.+..... ....+.+...
T Consensus 377 i~v~W-~~~~~~~~~~~t~~~~~~~n~~~~~~s~L~i~~~~~------~~~~~y~C~v~~~~~~~~~~~~~~~~~~---- 445 (551)
T 1ntl_A 377 VQFSW-FVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDW------LNGKEFKCRVNSAAFPAPIEKTISKTKG---- 445 (551)
T ss_pred eEEEE-EECCccccccccCCceECCCCeEEEEEeeEcCHHHc------cCCceEEEEEecCCCCCCeEEEEecCCC----
Confidence 36999 8887765421110 1111222 355544422 26789999999986532 2222211110
Q ss_pred eeccCCCceEecCCCeEEEeCCCcEEEEeeecCc-CC-ceeEEe
Q psy11568 74 LLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS-PT-PKIEWL 115 (116)
Q Consensus 74 ~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~ 115 (116)
...+ |.+...++. .....|+.+.|.|.+.|- |. ..++|+
T Consensus 446 -~~~~-P~V~~~~~~-~~~~~~~~~~L~C~v~gfyP~~i~v~W~ 486 (551)
T 1ntl_A 446 -RPKA-PQLYTIPPP-KEQMAKDKVSLTCMITDFFPEDITVEWQ 486 (551)
T ss_pred -CCcC-CceEEeCCC-hhhccCCceEEEEEEEEeECCCCEEEEE
Confidence 0111 544333212 223458999999999994 53 478996
No 463
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=97.68 E-value=0.00011 Score=44.65 Aligned_cols=53 Identities=9% Similarity=0.088 Sum_probs=33.7
Q ss_pred cEEEEEccCCeeeeccccceEE-eeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE
Q psy11568 2 YVLLWLIRDNTVIAYVKDLRIA-LSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS 61 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~~~~~~-~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~ 61 (116)
+.|+| +++|+++......... ..+ ..|.|.....+ |+|.|+|.+.+..+....
T Consensus 156 ~~v~W-~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~ytC~v~~~~~~~~~ 215 (221)
T 3m8o_H 156 LSVTW-SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCL------AGKSVTCHVKHYTNPSQD 215 (221)
T ss_dssp EEEEE-SCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSC------TTCEEEEEEEETTSCCEE
T ss_pred EEEEE-EECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcC------CCCeEEEEEEECCCCcee
Confidence 37999 8998877421110011 111 24778777554 899999999998765543
No 464
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=97.67 E-value=7.1e-05 Score=39.75 Aligned_cols=35 Identities=14% Similarity=0.379 Sum_probs=26.2
Q ss_pred CceEecCCCeE--EEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRF--EFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~--~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|..+..|.... .+.+|+.+.|.|.+.+ |.|.++|+
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~ 40 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWY 40 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEE
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEE
Confidence 55555554444 3457999999999966 88999997
No 465
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.66 E-value=7.5e-05 Score=40.53 Aligned_cols=35 Identities=17% Similarity=0.332 Sum_probs=30.3
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.|+..++....+.+|+++.|.|.+ +.|.|.+.|+
T Consensus 16 p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~ 50 (104)
T 1pd6_A 16 TAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWL 50 (104)
T ss_dssp SSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEE
T ss_pred CEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEE
Confidence 7777776555889999999999999 7999999997
No 466
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=4.5e-05 Score=40.90 Aligned_cols=34 Identities=6% Similarity=0.054 Sum_probs=29.4
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.+.| |.+.|+
T Consensus 9 ~~~~~~~-~~~~v~~G~~v~l~C~~~~~~-~~v~W~ 42 (101)
T 2edk_A 9 VLIVTPL-EDQQVFVGDRVEMAVEVSEEG-AQVMWM 42 (101)
T ss_dssp CCEEECC-CCEEEESSCCCBCCEEESCSS-CCCEEE
T ss_pred CEEEecC-CceEEcCCCCEEEEEEEeCCC-CEEEEE
Confidence 5665555 778999999999999999999 999997
No 467
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=2.2e-05 Score=41.72 Aligned_cols=35 Identities=23% Similarity=0.506 Sum_probs=29.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...| ....+.+|+++.|.|.+.|.|.|.+.|+
T Consensus 11 ~~i~~~p-~~~~v~~G~~v~l~C~~~g~p~~~v~W~ 45 (96)
T 2ens_A 11 VQLVVEP-EGGAVAPGGTVTLTCEVPAQPSPQIHWM 45 (96)
T ss_dssp CCCEEES-TTSEECTTCEEEEECCCSSCSSCCCCCE
T ss_pred CEEEECC-CCCEEcCCCeEEEEEEEccCCCCEEEEE
Confidence 5666666 5667889999999999999999999997
No 468
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=97.64 E-value=0.00013 Score=44.33 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=42.8
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEEeeecCc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGS 107 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~ 107 (116)
.+.|+++. + |++.|.|.+.... ......+.|.. +..+ ......+ ....+.+|+.+.|.|.+.+.
T Consensus 53 ~~~ls~vs-~------d~~~~~C~~~c~~-~~~~~~v~l~V------y~~P-~~v~i~~-~~~~~~~G~~~tL~C~v~~~ 116 (196)
T 3bn3_B 53 ARQLVDIR-E------PETQPVCFFRCAR-RTLQARGLIRT------FQRP-DRVELMP-LPPWQPVGENFTLSCRVPGA 116 (196)
T ss_dssp EEEEEEEC-S------SEECCEEEEEETT-EEEEEECEEEE------EBCC-CCCEECC-CCSSEETTSEEEEEEEETTC
T ss_pred EEEEEEEc-c------CCCceEEEEECCC-CceEEEEEEEE------ecCC-CcCEEcc-CCccccCCCcEEEEEEeCCc
Confidence 37888886 4 7888999976643 33333333322 1111 1122222 21236889999999999885
Q ss_pred -CCce--eEEe
Q psy11568 108 -PTPK--IEWL 115 (116)
Q Consensus 108 -P~p~--i~W~ 115 (116)
|... |+|+
T Consensus 117 ~P~~~L~i~wl 127 (196)
T 3bn3_B 117 GPRASLTLTLL 127 (196)
T ss_dssp BCGGGEEEEEE
T ss_pred cCCCCcEEEEE
Confidence 5544 6897
No 469
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=97.64 E-value=0.00014 Score=45.23 Aligned_cols=26 Identities=12% Similarity=0.277 Sum_probs=21.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
.|.|.++..+ |+|.|.|.+.|.....
T Consensus 221 ~L~I~~v~~~------DsG~Y~C~~~~~~~~~ 246 (256)
T 3juy_B 221 TLTITRVEPE------DFALYYCQVYGASSYT 246 (256)
T ss_dssp EEEESSCCGG------GCSEEEEEECCSSCCE
T ss_pred EEEECCCCHh------HCEEEEEEEeeCCCce
Confidence 5999999766 9999999999965433
No 470
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.62 E-value=3e-05 Score=43.43 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=30.2
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCc---CCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGS---PTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~---P~p~i~W~ 115 (116)
+.|+..| .+..+.+|+.+.|.|.+.|. |.|.+.|+
T Consensus 13 ~~f~~~P-~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~ 50 (118)
T 2edn_A 13 GVFLKKP-DSVSVETGKDAVVVAKVNGKELPDKPTIKWF 50 (118)
T ss_dssp SSCSBCC-CCCEEETTSCEECCEEEETTTSSSCCCCEEE
T ss_pred ceEEECC-CCeEEeCCCCEEEEEEEeccCCCCCCcEEEe
Confidence 5666666 88899999999999999885 79999996
No 471
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.62 E-value=7.8e-05 Score=40.28 Aligned_cols=34 Identities=6% Similarity=0.130 Sum_probs=29.6
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.+.|.| +.|+
T Consensus 9 p~~~~~~-~~~~v~~G~~v~l~C~~~~~~~~-v~W~ 42 (106)
T 2dlt_A 9 LEVLQDI-ADLTVKAAEQAVFKCEVSDEKVT-GKWY 42 (106)
T ss_dssp CCEEECC-CCEEEESSCCEECCCEESCSSCE-EEEE
T ss_pred CEEecCC-CCeEEeCCCeEEEEEEEcCCCcc-eEEE
Confidence 6666665 78899999999999999999988 9997
No 472
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=97.61 E-value=9.3e-05 Score=39.19 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=29.3
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
+.|...+ ....+.+|+++.|.|.+ +.|.|.+.|+.
T Consensus 9 ~~~~~~~-~~~~v~~G~~v~l~C~~-~~p~~~v~W~k 43 (95)
T 2k1m_A 9 SAFSKKP-RSVEVAAGSPAVFEAET-ERAGVKVRWQR 43 (95)
T ss_dssp CCCSBCC-CCEEEETTSCEEEEEEC-SSSSCCCEEEC
T ss_pred CeeEeCC-CcEEEeCCCcEEEEEEe-CCCCCeEEEEE
Confidence 4555555 78899999999999999 88999999974
No 473
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.60 E-value=0.00011 Score=44.96 Aligned_cols=23 Identities=26% Similarity=0.320 Sum_probs=20.7
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|.|.++..+ |+|.|.|.+.|..
T Consensus 200 ~L~I~~v~~~------D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 200 SLHIADSQPG------DSATYFCAAIDTN 222 (238)
T ss_dssp EEEETTCCGG------GCEEEEEEEEETT
T ss_pred EEEEcCCCHH------HCEEEEEEEeeCC
Confidence 7999999766 9999999999984
No 474
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=97.60 E-value=0.00017 Score=44.84 Aligned_cols=34 Identities=15% Similarity=0.211 Sum_probs=25.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEE--EEEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILS--RFVHVK 67 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~--~~~~v~ 67 (116)
.|.|.++..+ |+|.|.|.+.|..+.... ..|.|.
T Consensus 209 ~L~I~~v~~~------D~G~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 209 SLTISSLESE------DFVDYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp EEEECSCCGG------GCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEECCCChh------HCEEEEEEEeeCCCcEECCCEEEEEE
Confidence 5999999766 999999999997654442 344444
No 475
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=97.60 E-value=6.9e-05 Score=46.25 Aligned_cols=25 Identities=24% Similarity=0.329 Sum_probs=18.0
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
.|.|.....+ |.|.|+|.+.|..+.
T Consensus 189 ~L~i~~~~~~------d~g~YtC~a~n~~~~ 213 (248)
T 3pv7_A 189 CLKLNSSQED------PGTVYQCVVRHASLH 213 (248)
T ss_dssp EEECC--CCC------TTCEEEEEEECTTCS
T ss_pred EEEEcCcccc------CCCEEEEEEECCCCC
Confidence 4666666444 899999999999765
No 476
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=97.59 E-value=8.5e-05 Score=46.30 Aligned_cols=23 Identities=17% Similarity=0.368 Sum_probs=20.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|.|.++..+ |+|.|.|.+.|..
T Consensus 210 ~L~I~~v~~~------D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 210 TLTISSLQPE------DVATYFCYQYNNG 232 (257)
T ss_dssp EEEECSCCGG------GCSEEEEEEESSS
T ss_pred EEEECCCChh------hCEEEEEEEeCCC
Confidence 6999999766 9999999999975
No 477
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=97.58 E-value=0.00042 Score=37.95 Aligned_cols=24 Identities=17% Similarity=0.130 Sum_probs=20.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAG 57 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g 57 (116)
+|.|.++..+ |+|.|.|...+...
T Consensus 75 sL~I~~v~~~------DsG~Y~C~v~~~~~ 98 (115)
T 2or7_A 75 SLTIENTVVG------DGGPYCCVVEIPGA 98 (115)
T ss_dssp CEEESSCCGG------GCEEEEEEECCTTS
T ss_pred EEEEccCCHH------HCEEEEEEEECCCc
Confidence 6999999766 99999999987643
No 478
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=97.58 E-value=1.9e-05 Score=47.68 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=29.0
Q ss_pred EEEEEccCCeeeeccccc-eEEeeCC------eEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 3 VLLWLIRDNTVIAYVKDL-RIALSNG------SLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~~~~-~~~~~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
.|+| ++||.++...... .....++ .|.|.....+ |+|.|+|.|.|..+...
T Consensus 154 ~v~W-~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~------d~g~Y~C~a~n~~~~~~ 211 (218)
T 3s96_B 154 TVAW-KANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWR------SHNSFTCQVTHEGDTVE 211 (218)
T ss_dssp EEEE-EETTEEC--------------CEEEEEEEEEEHHHHH------TCSCEEEEEEETTEEEE
T ss_pred EEEE-EECCEECcCceecCcccccCCcEEEEEEEEEeHHHcc------CCCeEEEEEEeCCCccc
Confidence 7999 8899988641111 1111122 3556655333 79999999999976443
No 479
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.56 E-value=7.9e-05 Score=40.36 Aligned_cols=36 Identities=8% Similarity=0.159 Sum_probs=28.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCC-ceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPT-PKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~-p~i~W~~ 116 (116)
+.|...+ .+..+.+|+++.|.|.+.+.|. +.+.|+.
T Consensus 9 ~~~~~~~-~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k 45 (104)
T 2eny_A 9 VGITKRL-KTMEVLEGESCSFECVLSHESASDPAMWTV 45 (104)
T ss_dssp CCCSBCC-CCEEEESSCCEEEEEECSSCCCSSCBCCBS
T ss_pred CEEEecC-CCcEEcCCCcEEEEEEEcCCCCCceeEEEE
Confidence 4454444 7889999999999999999885 4899973
No 480
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=97.55 E-value=0.00018 Score=39.73 Aligned_cols=26 Identities=15% Similarity=0.457 Sum_probs=19.9
Q ss_pred CeEEecCCCCCCCCCCCCceEEEEEEEcCCCc
Q psy11568 27 GSLMFPPFPETGFRPDVHSTVYRCRASNEAGV 58 (116)
Q Consensus 27 ~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~ 58 (116)
.+|.|.++..+ |+|.|.|.+.+..+.
T Consensus 81 ~sL~I~~v~~~------D~G~Y~C~v~~~~~~ 106 (124)
T 1neu_A 81 GSIVIHNLDYS------DNGTFTCDVKNPPDI 106 (124)
T ss_dssp CCEEECSCCGG------GCEEEEEEEEC----
T ss_pred EEEEEccCChh------hCEEEEEEEEcCCCC
Confidence 47999999766 999999999988654
No 481
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=97.55 E-value=0.00026 Score=42.96 Aligned_cols=68 Identities=12% Similarity=0.146 Sum_probs=40.4
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC---Cc-eE--EEEEEEEeCcEeeeeccCCCceEecCCCeEEEeCCCcEEEE
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA---GV-IL--SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLD 101 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~---g~-~~--~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~l~ 101 (116)
.|.|.++..+ |+|.|.|.+.+.. +. .. ...|.|.... .. +.|.+....+. ...+.|.
T Consensus 73 sL~I~~v~~~------Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~~----~~-~~P~V~~~~~~------~~~~~L~ 135 (203)
T 2bnu_A 73 TLYIAASQPG------DSATYLCAVRPTSGGSYIPTFGRGTSLIVHPYI----QN-PDPAVYQLRRS------KSSDKSV 135 (203)
T ss_dssp EEEESSCCGG------GCEEEEEEEEECSSSTTCCEECCCEEEEEECCC----SS-CCCEEEEECCS------SSSSCEE
T ss_pred EEEEeeCCcc------cCeEEEEEEEcCcCcceeeeeCCCEEEEEeCCC----CC-CCCeEEecCCC------CCCcEEE
Confidence 6999999766 9999999998742 11 11 1344444310 00 11443222211 2478999
Q ss_pred eeecC-cCCcee
Q psy11568 102 CAAQG-SPTPKI 112 (116)
Q Consensus 102 C~~~g-~P~p~i 112 (116)
|.+.| .|.|.+
T Consensus 136 C~~~g~~P~p~v 147 (203)
T 2bnu_A 136 CLFTDFDSQTNV 147 (203)
T ss_dssp EEEESCCTTCCC
T ss_pred EEccccccCccc
Confidence 99999 788754
No 482
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=97.55 E-value=2.9e-05 Score=47.13 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=21.3
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
.|.|.++..+ |.|.|+|.+.|..+..
T Consensus 177 ~L~i~~~~~~------d~g~ytC~a~n~~~~~ 202 (221)
T 3eow_R 177 LWILVPSSQV------DGKQVTCKVEHESFEK 202 (221)
T ss_dssp EEECCCCSCC------CCCCEEEEECCSCSSS
T ss_pred EEEEeCCHHH------CCCeEEEEEECCCCCC
Confidence 5888888655 9999999999987543
No 483
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.54 E-value=0.00011 Score=39.47 Aligned_cols=34 Identities=12% Similarity=0.134 Sum_probs=28.8
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.+...+ ....+.+|+++.|.|.+.+ |.|.+.|+
T Consensus 9 p~~~~~~-~~~~v~~G~~v~l~C~~~~-~~~~v~W~ 42 (103)
T 2edf_A 9 AAIIKPL-EDQWVAPGEDVELRCELSR-AGTPVHWL 42 (103)
T ss_dssp CCEEECC-CCEEECTTSCEEECCEESS-SSCCCCEE
T ss_pred cEEEecC-CccEEcCCCCEEEEEEEeC-CCCcEEEE
Confidence 5555555 7789999999999999998 88899997
No 484
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=97.53 E-value=7.7e-05 Score=39.02 Aligned_cols=27 Identities=19% Similarity=0.306 Sum_probs=23.9
Q ss_pred CeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 88 YRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
.+..+.+|+.+.|.|.+.+ |.|.+.|+
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~ 30 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWY 30 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEE
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEE
Confidence 5677889999999999976 99999997
No 485
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.53 E-value=0.0002 Score=45.34 Aligned_cols=26 Identities=15% Similarity=0.339 Sum_probs=21.5
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCce
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVI 59 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~ 59 (116)
.|.|.++..+ |+|.|.|.+.|..+..
T Consensus 232 ~L~I~~v~~~------DsG~Y~C~a~~~~~~~ 257 (282)
T 1qok_A 232 SLTISRMEAE------DAATYYCQQRSSYPLT 257 (282)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSSSCE
T ss_pred EEEEccCChh------HCEEEEEEEeeCCCce
Confidence 6999999766 9999999999865433
No 486
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=97.53 E-value=0.00025 Score=38.42 Aligned_cols=28 Identities=18% Similarity=0.287 Sum_probs=25.9
Q ss_pred CeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 88 YRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 88 ~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
....+.+|+++.|.|.+.+.|.|.+.|+
T Consensus 9 ~~~~~~~G~~v~L~C~~~~~~~~~v~W~ 36 (108)
T 1jhl_L 9 SYLVASPGETITINCRASKSISKSLAWY 36 (108)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEE
T ss_pred CeeEEcCCCCEEEEeEECCCCCceEEEE
Confidence 6788899999999999999999999997
No 487
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=97.52 E-value=0.00019 Score=38.30 Aligned_cols=36 Identities=11% Similarity=0.218 Sum_probs=29.6
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
|.|...+.....+.+|+++.|.|.+. .|.|.+.|+.
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k 43 (100)
T 2yuv_A 8 AAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYK 43 (100)
T ss_dssp CCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEE
T ss_pred CeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEE
Confidence 77776663446788999999999998 7999999973
No 488
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=97.51 E-value=0.00028 Score=45.39 Aligned_cols=71 Identities=10% Similarity=0.033 Sum_probs=41.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCCCceEEEEEEEEeCcEeeeeccCCCceE-ecCCCeEEEeCCCcEEEEeeecC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVKAGSVVSLLDIQGPLFR-IEPPYRFEFSNESGGRLDCAAQG 106 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~~~~~~v~~~~~~~~~~~~~p~~~-~~~~~~~~~~~g~~~~l~C~~~g 106 (116)
.+.|+++. +.|.|+|.+.. .|......+.+... .. |.-. ..+ ....+.+|+.+.|.|.+.|
T Consensus 51 ~~~l~~v~--------~~~~y~C~~~~-~~~~~~~~v~l~V~------~~--P~~v~I~~-~~~~~~~G~~~~LtC~v~g 112 (291)
T 1mq8_A 51 VYELSNVQ--------EDSQPMCYSNC-PDGQSTAKTFLTVY------WT--PERVELAP-LPSWQPVGKNLTLRCQVEG 112 (291)
T ss_dssp EEEEESCC--------SCCCCEEEEEC-SSCEEEEECEEEEC------BC--CSCCCBCC-CCSBCCSSCCCEEEEEECC
T ss_pred EEEEEecc--------cCCeEEEEEEc-CCccEEEEEEEEEe------cC--CCCCEEec-CCccccCCCCEEEEEEecC
Confidence 36788885 23579999864 33444433333321 11 2111 111 2223678999999999988
Q ss_pred cCC-c--eeEEeC
Q psy11568 107 SPT-P--KIEWLI 116 (116)
Q Consensus 107 ~P~-p--~i~W~~ 116 (116)
.++ + .|+|+.
T Consensus 113 ~~P~~~l~itW~k 125 (291)
T 1mq8_A 113 GAPRANLTVVLLR 125 (291)
T ss_dssp CBSTTTEEEEEES
T ss_pred ccCCCCcEEEEEE
Confidence 643 3 589973
No 489
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.51 E-value=7.2e-05 Score=40.22 Aligned_cols=35 Identities=20% Similarity=0.503 Sum_probs=28.6
Q ss_pred CceEecCCCe--EEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYR--FEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~--~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.++..+... ..+.+|+++.|.|.+.+.|.| +.|+
T Consensus 8 P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~ 44 (104)
T 2e6p_A 8 PVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWY 44 (104)
T ss_dssp SCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEE
T ss_pred CCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEe
Confidence 6666665222 788999999999999999999 9997
No 490
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.50 E-value=7.9e-05 Score=45.14 Aligned_cols=51 Identities=14% Similarity=0.157 Sum_probs=29.9
Q ss_pred c-EEEEEccCCeeeeccccceEEe-----eCCeEEecCCCCCCCCCCCCceEEEEEEEcCCCceE
Q psy11568 2 Y-VLLWLIRDNTVIAYVKDLRIAL-----SNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL 60 (116)
Q Consensus 2 p-~v~W~~~~g~~~~~~~~~~~~~-----~~~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~g~~~ 60 (116)
| .|+| +++|..+.......... ..+.|.|.... . |.|.|+|.|.|..+...
T Consensus 155 p~~v~W-~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~-~------d~g~Y~C~a~n~~~~~~ 211 (219)
T 1c1e_H 155 PVTVTW-NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSP-R------PSETVTCNVAHPASSTK 211 (219)
T ss_dssp CCEEEE-GGGTBCTTEEECCCEESSSCEEEEEEEEEESSS-T------TTSCCEEEEEEGGGTEE
T ss_pred CeEEEE-EeCCcccceEecCCcccCCeEEEEEEEEEeccc-C------CCCEEEEEEEeCCCCcc
Confidence 5 8999 99987642111111111 11257773332 1 56999999999876543
No 491
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.50 E-value=0.00025 Score=38.53 Aligned_cols=46 Identities=22% Similarity=0.358 Sum_probs=0.0
Q ss_pred cEEEEEccCC------eeeeccccceEEeeCC----eEEecCCCCCCCCCCCCceEEEEEEEc
Q psy11568 2 YVLLWLIRDN------TVIAYVKDLRIALSNG----SLMFPPFPETGFRPDVHSTVYRCRASN 54 (116)
Q Consensus 2 p~v~W~~~~g------~~~~~~~~~~~~~~~~----~l~i~~v~~~~~~~~~d~G~y~C~a~n 54 (116)
+.|.| +++. ..+....+........ .|.|.++..+ |+|.|.|.+.+
T Consensus 32 ~~v~W-~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~------DsG~Y~C~~~~ 87 (108)
T 2coq_A 32 DSTNW-YRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVE------DSGTYKCKAYR 87 (108)
T ss_dssp EEEEE-EEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGG------GCEEEEEEEEE
T ss_pred CEEEE-EEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcc------cCEEEEEEEEe
No 492
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=97.49 E-value=0.0003 Score=38.47 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=19.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEc
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASN 54 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n 54 (116)
.|.|.++..+ |+|.|.|.+.+
T Consensus 67 ~L~I~~v~~~------DsG~Y~C~~~~ 87 (111)
T 2ywz_A 67 SLRISDLRVE------DSGTYKCQADY 87 (111)
T ss_dssp EEEECSCCGG------GCEEEEEEEEE
T ss_pred EEEECCCChh------cCEEEEEEEEc
Confidence 6999999766 99999999998
No 493
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=97.49 E-value=9.9e-05 Score=39.65 Aligned_cols=32 Identities=9% Similarity=0.210 Sum_probs=26.9
Q ss_pred eEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 82 FRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
+...+ ....+.+|+++.|.|.+.+ |.|.+.|+
T Consensus 10 ~~~~~-~~~~v~~G~~v~l~C~~~~-~~~~v~W~ 41 (103)
T 1x44_A 10 VTKQL-EDTTAYCGERVELECEVSE-DDANVKWF 41 (103)
T ss_dssp CSBCC-CCEEEETTEEEEEEEECSS-SSCCCEEE
T ss_pred eeccC-CCEEEECCCCEEEEEEecC-CCCeEEEE
Confidence 44444 7788999999999999988 77999997
No 494
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=97.49 E-value=0.0003 Score=38.27 Aligned_cols=22 Identities=9% Similarity=0.381 Sum_probs=19.6
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNE 55 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~ 55 (116)
.|.|.++..+ |+|.|.|.+.+.
T Consensus 74 ~L~I~~v~~~------DsG~Y~C~~~~~ 95 (109)
T 2q20_A 74 TFTISSLQPE------DIATYYCQQYDN 95 (109)
T ss_dssp EEEESSCCGG------GCEEEEEEECSS
T ss_pred EEEECCCChh------hCEEEEEEEeeC
Confidence 6999999766 999999999885
No 495
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.48 E-value=0.00022 Score=39.43 Aligned_cols=34 Identities=3% Similarity=0.029 Sum_probs=28.7
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEeC
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~ 116 (116)
+.|...+ .+..+.+|+.+.|.|.+.+ .|.+.|++
T Consensus 9 ~~~~~~l-~d~~v~eG~~a~f~C~vs~--~p~v~W~k 42 (112)
T 2e6q_A 9 ARLVAGL-EDVQVYDGEDAVFSLDLST--IIQGTWFL 42 (112)
T ss_dssp CCEEECC-CCEEEETTCEEEEEEEESS--CCCCEEEE
T ss_pred cEEecCC-CCeEEcCCCcEEEEEEECC--CCeEEEEE
Confidence 5565555 8899999999999999998 77899973
No 496
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=97.47 E-value=4.8e-05 Score=45.82 Aligned_cols=48 Identities=10% Similarity=0.172 Sum_probs=30.2
Q ss_pred cEEEEEccCCeeeeccc--cceEEe-eCC------eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 2 YVLLWLIRDNTVIAYVK--DLRIAL-SNG------SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 2 p~v~W~~~~g~~~~~~~--~~~~~~-~~~------~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
+.|+| +++|.++.... ...... .++ .|.|.....+ |+|.|+|.+.|..
T Consensus 144 ~~v~W-~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~------d~g~YtC~v~n~~ 200 (213)
T 3r06_A 144 INVKW-KVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYE------RHNLYTCEVTHKT 200 (213)
T ss_dssp EEEEE-EETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCEEEEEEEETT
T ss_pred eEEEE-EECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhc------cCCeEEEEEEecc
Confidence 38999 99999886321 101111 122 3556666433 7999999999985
No 497
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=97.45 E-value=0.00039 Score=37.26 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=28.9
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCc--CCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGS--PTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~--P~p~i~W~ 115 (116)
|.+...+ ....+..|+++.|.|.+.+. |.|.+.|+
T Consensus 11 P~i~~~p-~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~ 47 (112)
T 3so5_A 11 PQITVQP-ETQSAIXGSDVSFTCSAASSSDSPMTFAWX 47 (112)
T ss_dssp CEEEECC-CCEEECTTCCEEEEEEEEESCCCCCEEEEE
T ss_pred CeEEeCC-CCcEEECCCCEEEEEEEecCCCCCEEEEEc
Confidence 6676666 67789999999999999955 46899996
No 498
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=97.45 E-value=0.00031 Score=39.03 Aligned_cols=23 Identities=17% Similarity=0.238 Sum_probs=20.1
Q ss_pred eEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 28 SLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 28 ~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|.|.++..+ |+|.|.|.+.+..
T Consensus 72 ~L~I~~v~~~------DsG~Y~C~~~~~~ 94 (120)
T 1mqk_L 72 SLKINSLLPE------DFGSYYCQHHYGT 94 (120)
T ss_dssp EEEESSCCGG------GCEEEEEEECSSS
T ss_pred EEEECCCCHH------HCEEEEEEEEeCC
Confidence 6999999766 9999999998864
No 499
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=97.44 E-value=3e-05 Score=47.42 Aligned_cols=47 Identities=13% Similarity=0.161 Sum_probs=25.6
Q ss_pred EEEEEccCCeeeecc-ccce-E-EeeC------CeEEecCCCCCCCCCCCCceEEEEEEEcCC
Q psy11568 3 VLLWLIRDNTVIAYV-KDLR-I-ALSN------GSLMFPPFPETGFRPDVHSTVYRCRASNEA 56 (116)
Q Consensus 3 ~v~W~~~~g~~~~~~-~~~~-~-~~~~------~~l~i~~v~~~~~~~~~d~G~y~C~a~n~~ 56 (116)
.|+| ++||.++... .... . ...+ ..|.|.....+ |+|.|+|.+.|..
T Consensus 167 ~v~W-~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~------d~g~Y~C~a~n~~ 222 (233)
T 3bqu_C 167 NVKW-KIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYE------RHNSYTCEATHKT 222 (233)
T ss_dssp EEEE-EEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHH------TCCCEEEEEEEC-
T ss_pred EEEE-EECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhC------CCCCEEEEEEeCC
Confidence 6999 8899877532 0000 0 0111 24677777544 8999999999974
No 500
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.44 E-value=0.00012 Score=39.36 Aligned_cols=33 Identities=12% Similarity=-0.000 Sum_probs=28.2
Q ss_pred CceEecCCCeEEEeCCCcEEEEeeecCcCCceeEEe
Q psy11568 80 PLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115 (116)
Q Consensus 80 p~~~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~ 115 (116)
|.|...+ .+..+.+|+++.|.|.+ .|.|.+.|+
T Consensus 8 ~~~~~~~-~~~~v~~G~~v~l~C~v--~p~p~v~W~ 40 (100)
T 2yuz_A 8 LKILTPL-TDQTVNLGKEICLKCEI--SENIPGKWT 40 (100)
T ss_dssp CCCSBCC-CCEEEETTSCCCEEEEC--SSCCCEEEE
T ss_pred CEEeccC-CceEEcCCCCEEEEEEe--CCCCeEEEE
Confidence 5555554 88899999999999999 899999997
Done!