Your job contains 1 sequence.
>psy11568
MYVLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVIL
SRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11568
(116 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261046 - symbol:Dscam3 "Down syndrome cell adhesi... 168 5.9e-14 2
FB|FBgn0033159 - symbol:Dscam "Down syndrome cell adhesio... 151 2.7e-12 2
FB|FBgn0263219 - symbol:Dscam4 "Down syndrome cell adhesi... 156 5.8e-10 2
UNIPROTKB|O60469 - symbol:DSCAM "Down syndrome cell adhes... 109 8.6e-09 3
UNIPROTKB|F1NY98 - symbol:DSCAM "Uncharacterized protein"... 109 1.1e-08 3
ZFIN|ZDB-GENE-050310-7 - symbol:dscama "Down syndrome cel... 96 7.2e-08 3
MGI|MGI:1196281 - symbol:Dscam "Down syndrome cell adhesi... 109 5.1e-07 2
RGD|619992 - symbol:Dscam "Down syndrome cell adhesion mo... 109 5.1e-07 2
RGD|1304887 - symbol:Dscaml1 "Down syndrome cell adhesion... 92 1.0e-06 3
MGI|MGI:2150309 - symbol:Dscaml1 "Down syndrome cell adhe... 91 1.2e-06 3
UNIPROTKB|Q8TD84 - symbol:DSCAML1 "Down syndrome cell adh... 93 1.5e-06 3
UNIPROTKB|E1BZF3 - symbol:E1BZF3 "Uncharacterized protein... 98 4.7e-06 2
UNIPROTKB|Q92626 - symbol:PXDN "Peroxidasin homolog" spec... 101 0.00059 1
UNIPROTKB|F1Q057 - symbol:PXDN "Uncharacterized protein" ... 100 0.00071 1
>FB|FBgn0261046 [details] [associations]
symbol:Dscam3 "Down syndrome cell adhesion molecule 3"
species:7227 "Drosophila melanogaster" [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007156 "homophilic cell adhesion" evidence=IC] [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005887 "integral to
plasma membrane" evidence=ISM] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156 UniGene:Dm.16769
GeneID:42103 KEGG:dme:Dmel_CG31190 CTD:42103 FlyBase:FBgn0261046
ChiTaRS:Dscam3 GenomeRNAi:42103 NextBio:827185 RefSeq:NP_996226.1
ProteinModelPortal:Q7KSE9 SMR:Q7KSE9 PRIDE:Q7KSE9 UCSC:CG31190-RB
InParanoid:Q7KSE9 OMA:NATAYPL ArrayExpress:Q7KSE9 Bgee:Q7KSE9
Uniprot:Q7KSE9
Length = 2046
Score = 168 (64.2 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR 62
++ W++RD ++ V LR NG+L FPPF +R DVH YRCRASNEAG +LSR
Sbjct: 69 LVTWVLRDGSLATQVPGLRKISGNGTLHFPPFLAQYYRTDVHEATYRCRASNEAGTVLSR 128
Query: 63 FVHVKA 68
V V A
Sbjct: 129 NVQVHA 134
Score = 58 (25.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 100 LDCAAQGSPTPKIEWL 115
L+C A G+PTP+ WL
Sbjct: 1329 LECLAVGNPTPRARWL 1344
Score = 57 (25.1 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L C+A GSP P+ WL+
Sbjct: 458 LKCSASGSPPPQFAWLL 474
Score = 41 (19.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 75 LDIQGPLFRIEPPYRFEFSNESGGR--LDCAAQGSPTP 110
L++ P IEP ++F + + GGR + CA P
Sbjct: 628 LNVNSPPV-IEP-FKFPKNLQEGGRAQITCAVSSGDMP 663
Score = 40 (19.1 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 100 LDCAAQGSPTPKIEW 114
L C QG+P P W
Sbjct: 266 LPCNIQGNPFPIFTW 280
Score = 40 (19.1 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 82 FRIEPPYRFEFS--NESGGR-----LDCAAQGSPTPKIEW 114
F+ P RFE S N S R LDC A+G I W
Sbjct: 772 FKPLKPARFEQSARNISSRRNDPVTLDCHAKGDEPITIGW 811
Score = 38 (18.4 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 100 LDCAAQGSPTPKIEWL 115
++C A S + KI WL
Sbjct: 1113 VNCTALSSQSLKISWL 1128
>FB|FBgn0033159 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM;ISS] [GO:0007411 "axon guidance"
evidence=IGI;IMP;TAS] [GO:0008046 "axon guidance receptor activity"
evidence=IMP;NAS] [GO:0007422 "peripheral nervous system
development" evidence=IMP] [GO:0016319 "mushroom body development"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0006909 "phagocytosis" evidence=IMP] [GO:0051635 "bacterial
cell surface binding" evidence=IDA] [GO:0048666 "neuron
development" evidence=IMP] [GO:0030424 "axon" evidence=IDA]
[GO:0070593 "dendrite self-avoidance" evidence=IMP;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0021551 "central nervous system morphogenesis" evidence=IMP]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 EMBL:AE013599
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007422
GO:GO:0006909 GO:GO:0016319 InterPro:IPR013098 Pfam:PF07679
GO:GO:0007413 GO:GO:0051635 GO:GO:0021551 GO:GO:0048846 CTD:1826
GO:GO:0070593 GeneTree:ENSGT00690000101869 GO:GO:0008046
UniGene:Dm.2832 GeneID:35652 KEGG:dme:Dmel_CG17800
FlyBase:FBgn0033159 GenomeRNAi:35652 NextBio:794432
InterPro:IPR021012 Pfam:PF12355 RefSeq:NP_001036503.1
ProteinModelPortal:Q0E9K8 SMR:Q0E9K8 STRING:Q0E9K8 PRIDE:Q0E9K8
EnsemblMetazoa:FBtr0111102 UCSC:CG17800-RAN Bgee:Q0E9K8
Uniprot:Q0E9K8
Length = 2037
Score = 151 (58.2 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
++W+ D T + V LR S+G L+FPPF +R +VH+ VY C A N+ G I+SR
Sbjct: 71 IIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRD 130
Query: 64 VHVKA 68
VHV+A
Sbjct: 131 VHVRA 135
Score = 109 (43.4 bits), Expect = 0.00012, P = 0.00012
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 76 DIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115
D +GP+F EP R +FSN +G ++C A G+P P+I W+
Sbjct: 35 DQKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWI 74
Score = 59 (25.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 83 RIEPPY-RFEFSNES---GGR--LDCAAQGSPTPKIEW 114
R +PP R F E+ G L C A G+PTP+I W
Sbjct: 426 RFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISW 463
Score = 52 (23.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 70 SVVSLLDIQGP--LFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWLI 116
S+V++ Q P + + + F ++ ++ C A G+P P+I W I
Sbjct: 1308 SIVAMPSDQVPAKIASFDDTFTATFKEDA--KMPCLAVGAPQPEITWKI 1354
Score = 49 (22.3 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 70 SVVSLLDIQGPLF-RIEPPYR-FEFSNESGGRLDCAAQGSPTPKIEWL 115
SV ++L + PL +I+PP + +F + C G+P + W+
Sbjct: 333 SVETVLTVTAPLSAKIDPPTQTVDFGRPAV--FTCQYTGNPIKTVSWM 378
Score = 36 (17.7 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 6/13 (46%), Positives = 6/13 (46%)
Query: 102 CAAQGSPTPKIEW 114
C AQ P P W
Sbjct: 270 CPAQAYPVPFYRW 282
>FB|FBgn0263219 [details] [associations]
symbol:Dscam4 "Down syndrome cell adhesion molecule 4"
species:7227 "Drosophila melanogaster" [GO:0005887 "integral to
plasma membrane" evidence=ISM] [GO:0007155 "cell adhesion"
evidence=ISS] [GO:0042802 "identical protein binding" evidence=ISS]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 EMBL:AE014296 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR013098 Pfam:PF07679 GeneTree:ENSGT00690000101869
UniGene:Dm.21615 GeneID:2769008 KEGG:dme:Dmel_CG42330 CTD:2769008
FlyBase:FBgn0263219 GenomeRNAi:2769008 NextBio:849087
RefSeq:NP_001036596.2 RefSeq:NP_001137908.1 SMR:Q0E8G9
EnsemblMetazoa:FBtr0299839 EnsemblMetazoa:FBtr0299840
InParanoid:Q0E8G9 OMA:FNHRQRA Uniprot:Q0E8G9
Length = 1918
Score = 156 (60.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 58 VILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
+++ + + V+ LD+QGP+F EPP+R EFSN SGG ++C+ GSP P++EW
Sbjct: 10 ILILYVIRAETSQFVNGLDLQGPIFLHEPPHRVEFSNNSGGLIECSGHGSPPPEVEW 66
Score = 139 (54.0 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 12 TVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRFVHVK 67
T I +D+ LSNGS+MF PF +R +VH+TVYRC+ N G +LSR VHV+
Sbjct: 67 TPIPPQQDMVFQLSNGSMMFYPFTAEKYRHEVHATVYRCKLRNLVGTVLSREVHVR 122
Score = 48 (22.0 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 100 LDCAAQGSPTPKIEW 114
L C AQG P P W
Sbjct: 255 LPCIAQGHPVPTYRW 269
Score = 46 (21.3 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 100 LDCAAQGSPTPKIEW 114
L C A G+P P+ W
Sbjct: 441 LKCVATGNPLPQFTW 455
Score = 38 (18.4 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 9/41 (21%), Positives = 13/41 (31%)
Query: 75 LDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEWL 115
L + PL P + + C G P + WL
Sbjct: 324 LTVTAPLTAHLQPQVQTVDVDKDAQFQCIVSGHPVHDVNWL 364
Score = 34 (17.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 6/13 (46%), Positives = 7/13 (53%)
Query: 95 ESGGRLDCAAQGS 107
E GG C AQ +
Sbjct: 492 EDGGEYTCTAQNA 504
Score = 34 (17.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 6/15 (40%), Positives = 7/15 (46%)
Query: 100 LDCAAQGSPTPKIEW 114
L C G+P P W
Sbjct: 1340 LPCRKVGAPAPVTIW 1354
Score = 33 (16.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 84 IEPPYRFEFSNE 95
I PP RF +N+
Sbjct: 1882 INPPARFSDAND 1893
>UNIPROTKB|O60469 [details] [associations]
symbol:DSCAM "Down syndrome cell adhesion molecule"
species:9606 "Homo sapiens" [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IEA] [GO:0060060
"post-embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042327 "positive
regulation of phosphorylation" evidence=IDA] [GO:0007162 "negative
regulation of cell adhesion" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS;TAS] [GO:0030426 "growth cone" evidence=ISS]
[GO:0048842 "positive regulation of axon extension involved in axon
guidance" evidence=IDA] [GO:0070593 "dendrite self-avoidance"
evidence=ISS] [GO:0030424 "axon" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041
PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060 GO:GO:0005576
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 Pathway_Interaction_DB:hnf3apathway
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
Reactome:REACT_111155 GO:GO:0007162 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327 GO:GO:0060060
EMBL:AF023450 EMBL:AF023449 EMBL:AF217525 EMBL:AL163283
EMBL:AL163282 EMBL:AL163281 IPI:IPI00029700 IPI:IPI00219339
RefSeq:NP_001258463.1 RefSeq:NP_001380.2 UniGene:Hs.397800
ProteinModelPortal:O60469 SMR:O60469 STRING:O60469
PhosphoSite:O60469 PaxDb:O60469 PRIDE:O60469
Ensembl:ENST00000400454 GeneID:1826 KEGG:hsa:1826 UCSC:uc002yyq.1
CTD:1826 GeneCards:GC21M041382 HGNC:HGNC:3039 MIM:602523
neXtProt:NX_O60469 PharmGKB:PA27491 HOVERGEN:HBG051409
InParanoid:O60469 KO:K06767 OMA:ECKNKSE OrthoDB:EOG4J9MXZ
ChiTaRS:DSCAM GenomeRNAi:1826 NextBio:7449 ArrayExpress:O60469
Bgee:O60469 CleanEx:HS_DSCAM Genevestigator:O60469
GermOnline:ENSG00000171587 GO:GO:0070593 GO:GO:0048842
Uniprot:O60469
Length = 2012
Score = 109 (43.4 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R NG+L PFP + F +H Y C A N +G I S+
Sbjct: 56 LRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQD 115
Query: 64 VHVKA 68
VH+KA
Sbjct: 116 VHIKA 120
Score = 50 (22.7 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P+P ++W+
Sbjct: 1305 LPCKAVGDPSPAVKWM 1320
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P WL
Sbjct: 244 LPCKALGHPEPDYRWL 259
Score = 43 (20.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L C +G+P P I W +
Sbjct: 426 LMCNVKGTPLPTITWTL 442
Score = 40 (19.1 bits), Expect = 8.6e-09, Sum P(3) = 8.6e-09
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESG 97
G+VVS L+I R YR +N +G
Sbjct: 463 GNVVSYLNISSSQVRDGGVYRCTANNSAG 491
Score = 33 (16.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 79 GPLFRIEPPY-RFEFSNESGG 98
G L + PPY R +F GG
Sbjct: 1896 GDLIHL-PPYLRMDFLLNRGG 1915
>UNIPROTKB|F1NY98 [details] [associations]
symbol:DSCAM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0042327
"positive regulation of phosphorylation" evidence=IEA] [GO:0048813
"dendrite morphogenesis" evidence=IEA] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=IEA] [GO:0060060 "post-embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0070593 "dendrite
self-avoidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424
SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598
SMART:SM00408 GO:GO:0030426 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042327 OMA:ECKNKSE GeneTree:ENSGT00690000101869
EMBL:AADN02010831 EMBL:AADN02010832 EMBL:AADN02010833
EMBL:AADN02010834 EMBL:AADN02010835 EMBL:AADN02010836
EMBL:AADN02010837 IPI:IPI00598254 Ensembl:ENSGALT00000025993
Uniprot:F1NY98
Length = 1994
Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R NG+L PFP + F +H Y C A N +G I S+
Sbjct: 42 LRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQD 101
Query: 64 VHVKA 68
VH+KA
Sbjct: 102 VHIKA 106
Score = 58 (25.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G PTPK WL
Sbjct: 230 LPCKASGHPTPKYRWL 245
Score = 58 (25.5 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 81 LFRIEPPYRFEFSNESG--GR---LDCAAQGSPTPKIEW 114
+ R+ P + + S++ G G+ L+C+A+G P P I W
Sbjct: 671 IVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPTIVW 709
Score = 49 (22.3 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P ++W+
Sbjct: 1291 LPCKAVGDPAPTVKWM 1306
Score = 43 (20.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L C +G+P P I W +
Sbjct: 412 LMCNVKGTPLPTITWTL 428
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESG 97
G+VVS L+I R YR +N +G
Sbjct: 449 GNVVSYLNISNTQVRDGGVYRCTANNSAG 477
>ZFIN|ZDB-GENE-050310-7 [details] [associations]
symbol:dscama "Down syndrome cell adhesion molecule
a" species:7955 "Danio rerio" [GO:0005887 "integral to plasma
membrane" evidence=IDA] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
ZFIN:ZDB-GENE-050310-7 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:NOG12793 InterPro:IPR013098
Pfam:PF07679 GO:GO:0042074 HOVERGEN:HBG051409 KO:K06767
OrthoDB:EOG4J9MXZ GeneTree:ENSGT00690000101869 HOGENOM:HOG000112277
EMBL:BX248386 EMBL:CABZ01051870 EMBL:CABZ01051871 EMBL:CABZ01051872
EMBL:CABZ01051873 EMBL:CABZ01051874 EMBL:CR848005 EMBL:AY552547
IPI:IPI00501717 RefSeq:NP_001025395.1 UniGene:Dr.84606 SMR:Q53CM6
Ensembl:ENSDART00000125045 GeneID:568643 KEGG:dre:568643 CTD:568643
NextBio:20889266 Uniprot:Q53CM6
Length = 2024
Score = 96 (38.9 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + V +R NG+L FP + F +H Y C A N +G I S+
Sbjct: 56 LRWYLATGEESYNVPGIRHVHPNGTLQIFHFPPSSFSKVIHDNTYYCTAENPSGKIRSQD 115
Query: 64 VHVKA 68
VH+KA
Sbjct: 116 VHIKA 120
Score = 53 (23.7 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P PK WL
Sbjct: 244 LPCKASGHPAPKYRWL 259
Score = 51 (23.0 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P I+WL
Sbjct: 1313 LPCRAVGDPPPAIKWL 1328
Score = 45 (20.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L C +G+P P I W +
Sbjct: 426 LTCHVKGTPQPAITWTL 442
Score = 43 (20.2 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 62 RFVH-VKA-GSVVSLLDIQGPLFRIEPPYRFEFSNESG 97
R VH + A G+VVS L+I R YR +N +G
Sbjct: 454 RIVHSITAEGNVVSYLNISHIQVRDSGVYRCTCNNSAG 491
>MGI|MGI:1196281 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IMP] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0042327
"positive regulation of phosphorylation" evidence=ISO] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=ISO;IDA] [GO:0060060 "post-embryonic retina morphogenesis
in camera-type eye" evidence=IMP] [GO:0070593 "dendrite
self-avoidance" evidence=IMP] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1196281 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0007155
GO:GO:0007626 GO:GO:0030426 GO:GO:0048813 GO:GO:0007162
eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679 GO:GO:0042327
EMBL:CH466602 GO:GO:0060060 Reactome:REACT_137402 CTD:1826
HOVERGEN:HBG051409 KO:K06767 OMA:ECKNKSE ChiTaRS:DSCAM
GO:GO:0070593 GO:GO:0048842 EMBL:AY005483 EMBL:AF315558
IPI:IPI00112204 RefSeq:NP_112451.1 UniGene:Mm.328737 HSSP:O88792
ProteinModelPortal:Q9ERC8 SMR:Q9ERC8 IntAct:Q9ERC8 STRING:Q9ERC8
PhosphoSite:Q9ERC8 PRIDE:Q9ERC8 Ensembl:ENSMUST00000056102
GeneID:13508 KEGG:mmu:13508 UCSC:uc008add.1
GeneTree:ENSGT00690000101869 HOGENOM:HOG000112277 InParanoid:Q9ERC8
NextBio:284054 Bgee:Q9ERC8 Genevestigator:Q9ERC8 Uniprot:Q9ERC8
Length = 2013
Score = 109 (43.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R NG+L PFP + F +H Y C A N +G I S+
Sbjct: 56 LRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQD 115
Query: 64 VHVKA 68
VH+KA
Sbjct: 116 VHIKA 120
Score = 50 (22.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P+P ++W+
Sbjct: 1305 LPCKAVGDPSPAVKWM 1320
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P WL
Sbjct: 244 LPCKALGHPEPDYRWL 259
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L C +G+P P + W +
Sbjct: 426 LVCNVKGTPLPTVTWTL 442
>RGD|619992 [details] [associations]
symbol:Dscam "Down syndrome cell adhesion molecule" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=ISO;ISS]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=ISO;ISS] [GO:0007626
"locomotory behavior" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030424 "axon" evidence=ISO;ISS]
[GO:0030426 "growth cone" evidence=ISO;ISS] [GO:0042327 "positive
regulation of phosphorylation" evidence=ISO;ISS] [GO:0048813
"dendrite morphogenesis" evidence=ISO] [GO:0048842 "positive
regulation of axon extension involved in axon guidance"
evidence=ISO;IMP] [GO:0060060 "post-embryonic retina morphogenesis
in camera-type eye" evidence=ISO] [GO:0070593 "dendrite
self-avoidance" evidence=ISO;ISS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 RGD:619992 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030424 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007155 GO:GO:0007626 GO:GO:0030426 GO:GO:0048813
GO:GO:0007162 eggNOG:NOG12793 InterPro:IPR013098 Pfam:PF07679
GO:GO:0042327 GO:GO:0060060 CTD:1826 HOVERGEN:HBG051409 KO:K06767
OrthoDB:EOG4J9MXZ GO:GO:0070593 GO:GO:0048842 HSSP:O88792
HOGENOM:HOG000112277 EMBL:AF334385 IPI:IPI00207531
RefSeq:NP_598271.1 UniGene:Rn.24399 ProteinModelPortal:Q8VHZ8
SMR:Q8VHZ8 IntAct:Q8VHZ8 STRING:Q8VHZ8 GeneID:171119
KEGG:rno:171119 InParanoid:Q8VHZ8 NextBio:621852
ArrayExpress:Q8VHZ8 Genevestigator:Q8VHZ8 Uniprot:Q8VHZ8
Length = 2013
Score = 109 (43.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R NG+L PFP + F +H Y C A N +G I S+
Sbjct: 56 LRWYLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQD 115
Query: 64 VHVKA 68
VH+KA
Sbjct: 116 VHIKA 120
Score = 50 (22.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P+P ++W+
Sbjct: 1305 LPCKAVGDPSPAVKWM 1320
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P WL
Sbjct: 244 LPCKALGHPEPDYRWL 259
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L C +G+P P + W +
Sbjct: 426 LVCNVKGTPLPTVTWTL 442
>RGD|1304887 [details] [associations]
symbol:Dscaml1 "Down syndrome cell adhesion molecule-like 1"
species:10116 "Rattus norvegicus" [GO:0007156 "homophilic cell
adhesion" evidence=IEA;ISO] [GO:0007162 "negative regulation of
cell adhesion" evidence=IEA;ISO] [GO:0007420 "brain development"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=IEA;ISO]
[GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA;ISO] [GO:0070593 "dendrite self-avoidance"
evidence=IEA;ISO] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1304887 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 InterPro:IPR013098
Pfam:PF07679 GO:GO:0048704 GO:GO:0007156 EMBL:CH473975
GO:GO:0070593 GeneTree:ENSGT00690000101869 CTD:57453 KO:K06768
OrthoDB:EOG40GCPX IPI:IPI00369575 RefSeq:NP_001101611.1
UniGene:Rn.100124 Ensembl:ENSRNOT00000022476 GeneID:315615
KEGG:rno:315615 UCSC:RGD:1304887 NextBio:669526 Uniprot:D3ZPL7
Length = 2111
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R +NG+L PF + F +H Y C A N AG I S
Sbjct: 115 LRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPN 174
Query: 64 VHVKA 68
+ +KA
Sbjct: 175 IRIKA 179
Score = 55 (24.4 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 100 LDCAAQGSPTPKIEWL 115
L CAA G P P I WL
Sbjct: 303 LPCAASGYPIPAIRWL 318
Score = 52 (23.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L CAA+G+P P + W +
Sbjct: 485 LMCAAKGAPPPTVTWAL 501
Score = 51 (23.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 59 ILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
+ + F +A V++++D PL P + + S L CA GSP I W
Sbjct: 354 VTNTFGSAEANGVLTVID---PLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRW 406
Score = 48 (22.0 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 99 RLDCAAQGSPTPKIEW 114
RL C + G P P ++W
Sbjct: 1366 RLPCNSVGDPAPAVKW 1381
Score = 39 (18.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESG 97
G+ +S +++ GP R YR N G
Sbjct: 522 GTTISHMNVTGPQIRDGGVYRCTARNSVG 550
>MGI|MGI:2150309 [details] [associations]
symbol:Dscaml1 "Down syndrome cell adhesion molecule like 1"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007156
"homophilic cell adhesion" evidence=ISO;ISA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IMP] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007420 "brain development"
evidence=ISO] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016338 "calcium-independent cell-cell adhesion"
evidence=ISA] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=ISO] [GO:0070593 "dendrite self-avoidance" evidence=IMP]
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 SMART:SM00060 MGI:MGI:2150309 GO:GO:0016021
GO:GO:0005886 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0007162 eggNOG:NOG12793
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0007156
GO:GO:0016338 EMBL:AC126804 HOVERGEN:HBG051409 GO:GO:0070593
HOGENOM:HOG000112277 OrthoDB:EOG40GCPX EMBL:AC119237 EMBL:AC159893
EMBL:AC174644 EMBL:BC096527 IPI:IPI00762484 UniGene:Mm.325499
ProteinModelPortal:Q4VA61 SMR:Q4VA61 STRING:Q4VA61 PaxDb:Q4VA61
PRIDE:Q4VA61 UCSC:uc009pfz.1 InParanoid:Q4VA61 Bgee:Q4VA61
Genevestigator:Q4VA61 Uniprot:Q4VA61
Length = 2053
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 22/65 (33%), Positives = 30/65 (46%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R +NG+L PF + F +H Y C A N AG I S
Sbjct: 57 LRWYLATGDDIYDVPHIRHVHANGTLQLFPFSPSAFNSFIHDNDYFCTAENAAGKIRSPN 116
Query: 64 VHVKA 68
+ +KA
Sbjct: 117 IRIKA 121
Score = 55 (24.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 100 LDCAAQGSPTPKIEWL 115
L CAA G P P I WL
Sbjct: 245 LPCAASGYPIPAIRWL 260
Score = 52 (23.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L CAA+G+P P + W +
Sbjct: 427 LMCAAKGAPPPTVTWAL 443
Score = 50 (22.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 59 ILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
+ + F +A +++++D PL P + + S L CA GSP I W
Sbjct: 296 VTNTFGSAEANGILTVID---PLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRW 348
Score = 48 (22.0 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 99 RLDCAAQGSPTPKIEW 114
RL C + G P P ++W
Sbjct: 1308 RLPCNSVGDPAPAVKW 1323
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESG 97
G+ +S +++ GP R YR N G
Sbjct: 464 GTTISHMNVTGPQIRDGGVYRCTARNSVG 492
>UNIPROTKB|Q8TD84 [details] [associations]
symbol:DSCAML1 "Down syndrome cell adhesion molecule-like
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0007162 "negative regulation of cell
adhesion" evidence=IEA] [GO:0070593 "dendrite self-avoidance"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=NAS] [GO:0009986
"cell surface" evidence=IDA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=NAS] [GO:0007420 "brain development"
evidence=IDA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IDA] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0007156 "homophilic cell adhesion" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0001709 "cell fate determination" evidence=NAS] [GO:0005886
"plasma membrane" evidence=TAS] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 EMBL:AF334384 GO:GO:0016021 GO:GO:0005886
GO:GO:0042803 GO:GO:0009986 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 Reactome:REACT_111155
GO:GO:0007409 GO:GO:0007162 eggNOG:NOG12793 GO:GO:0009953
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0007156
GO:GO:0001709 HOVERGEN:HBG051409 GO:GO:0070593 HOGENOM:HOG000112277
EMBL:AF491813 EMBL:AF304304 EMBL:AF304305 EMBL:AB032958
EMBL:AP000711 EMBL:AP000757 EMBL:AP001554 EMBL:AP002342
IPI:IPI00154755 IPI:IPI00978116 RefSeq:NP_065744.2
UniGene:Hs.659513 PDB:1VA9 PDBsum:1VA9 ProteinModelPortal:Q8TD84
SMR:Q8TD84 IntAct:Q8TD84 STRING:Q8TD84 DMDM:73620825 PaxDb:Q8TD84
PRIDE:Q8TD84 Ensembl:ENST00000321322 GeneID:57453 KEGG:hsa:57453
UCSC:uc001prh.1 CTD:57453 GeneCards:GC11M117332 HGNC:HGNC:14656
HPA:CAB025540 MIM:611782 neXtProt:NX_Q8TD84 PharmGKB:PA38384
InParanoid:Q8TD84 KO:K06768 OrthoDB:EOG40GCPX ChiTaRS:DSCAML1
EvolutionaryTrace:Q8TD84 GenomeRNAi:57453 NextBio:63628
ArrayExpress:Q8TD84 Bgee:Q8TD84 CleanEx:HS_DSCAML1
Genevestigator:Q8TD84 GermOnline:ENSG00000177103 Uniprot:Q8TD84
Length = 2053
Score = 93 (37.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 23/65 (35%), Positives = 30/65 (46%)
Query: 4 LLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSRF 63
L W + I V +R +NG+L PF + F +H Y C A N AG I S
Sbjct: 57 LRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPN 116
Query: 64 VHVKA 68
+ VKA
Sbjct: 117 IRVKA 121
Score = 52 (23.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 100 LDCAAQGSPTPKIEWLI 116
L CAA+G+P P + W +
Sbjct: 427 LMCAAKGAPPPTVTWAL 443
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P I WL
Sbjct: 245 LPCTASGYPIPAIRWL 260
Score = 48 (22.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 99 RLDCAAQGSPTPKIEW 114
RL C + G P P ++W
Sbjct: 1308 RLPCNSVGDPAPAVKW 1323
Score = 46 (21.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 59 ILSRFVHVKAGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
+ + F +A ++ ++D PL P + + S L CA GSP I W
Sbjct: 296 VTNTFGSAEATGILMVID---PLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRW 348
Score = 36 (17.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 69 GSVVSLLDIQGPLFRIEPPYRFEFSNESG 97
G+ +S +++ GP R YR N G
Sbjct: 464 GTTISHMNVTGPQIRDGGVYRCTARNLVG 492
>UNIPROTKB|E1BZF3 [details] [associations]
symbol:E1BZF3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007156 "homophilic cell adhesion"
evidence=IEA] [GO:0007162 "negative regulation of cell adhesion"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0070593 "dendrite
self-avoidance" evidence=IEA] InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0007162 InterPro:IPR013098 Pfam:PF07679 GO:GO:0007156
GeneTree:ENSGT00690000101869 OMA:IVICILR EMBL:AADN02058061
EMBL:AADN02058062 EMBL:AADN02058063 EMBL:AADN02058064
EMBL:AADN02058065 EMBL:AADN02058066 EMBL:AADN02058067
IPI:IPI00573997 ProteinModelPortal:E1BZF3
Ensembl:ENSGALT00000025989 Uniprot:E1BZF3
Length = 1870
Score = 98 (39.6 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 3 VLLWLIRDNTVIAYVKDLRIALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR 62
VL W + I V +R +NG+L PF + F +H Y C A N AG I S
Sbjct: 58 VLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSP 117
Query: 63 FVHVKA 68
+ VKA
Sbjct: 118 NIRVKA 123
Score = 51 (23.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 9/16 (56%), Positives = 9/16 (56%)
Query: 100 LDCAAQGSPTPKIEWL 115
L C A G P P I WL
Sbjct: 249 LPCIASGYPNPAIRWL 264
Score = 49 (22.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 99 RLDCAAQGSPTPKIEW 114
RL C + G P P I+W
Sbjct: 1313 RLPCNSVGEPVPAIKW 1328
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 68 AGSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
+ V L + PL P + + S L CA GSP I W
Sbjct: 306 SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRW 352
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 101 (40.6 bits), Expect = 0.00059, P = 0.00059
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 4 LLWLIRDNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR 62
++WL R+N ++ D R+ L +G+LM ET +Y+C A N AG + ++
Sbjct: 277 IIWL-RNNNELSMKTDSRLNLLDDGTLMIQNTQETD------QGIYQCMAKNVAGEVKTQ 329
Query: 63 FVHVKA-GSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
V ++ GS P F I+P ES L+C+A G P P+I W
Sbjct: 330 EVTLRYFGSPAR------PTFVIQPQNTEVLVGESV-TLECSATGHPPPRISW 375
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 100 (40.3 bits), Expect = 0.00071, P = 0.00071
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 4 LLWLIRDNTVIAYVKDLRI-ALSNGSLMFPPFPETGFRPDVHSTVYRCRASNEAGVILSR 62
++WL R+N ++ D R+ L +G+LM ET +Y+C A N AG + ++
Sbjct: 210 IIWL-RNNNELSMKTDSRLNLLDDGTLMIQNTQETD------QGIYQCMAKNVAGQVKTQ 262
Query: 63 FVHVKA-GSVVSLLDIQGPLFRIEPPYRFEFSNESGGRLDCAAQGSPTPKIEW 114
V ++ GS P F I+P ES L+C+A G P P+I W
Sbjct: 263 EVTLRYFGSPAR------PAFVIQPQNTEVLVGESV-TLECSATGHPPPRITW 308
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 116 116 0.00091 102 3 11 22 0.44 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 569 (61 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.28u 0.08s 12.36t Elapsed: 00:00:03
Total cpu time: 12.28u 0.08s 12.36t Elapsed: 00:00:03
Start: Thu Aug 15 13:26:04 2013 End: Thu Aug 15 13:26:07 2013