BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11571
(372 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/313 (68%), Positives = 241/313 (76%), Gaps = 26/313 (8%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
A REERDVLV GD +WIT LHYAFQDD+NLYLVMDYY GGDLLTLLSKFEDRLPE+MA
Sbjct: 118 TACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMA 177
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY+AEMV+AI S+H LHYVHR DIKPDN+L+D NGHIRLADFGSCL+L
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHR----------DIKPDNILMDMNGHIRLADFGSCLKLME 227
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
DGTVQS+VAVGTPDYISPEIL AME G+GRYGPECDWWSLGVCMYEMLYGETPFYAESLV
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSL 296
ETYGKIMNH+ F P+ V ++S++AKDL+RRLICS + RLGQNGI DFK
Sbjct: 288 ETYGKIMNHKERFQFPTQVT-DVSENAKDLIRRLICSREHRLGQNGIEDFK--------- 337
Query: 297 SISPRNHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAGVRXXXXXXXXXXXXXX 356
HP+F GI WD+IR+ APYIPEVSSPTDTS+FDVD+ ++
Sbjct: 338 -----KHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLK-NSETMPPPTHTAF 391
Query: 357 XXXHLPFVGFTFT 369
HLPFVGFT+T
Sbjct: 392 SGHHLPFVGFTYT 404
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 3 RLRELEALFLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIE----FVA 58
RLR+LE L GP Q G+ FS+ETLLDIL+ LYDEC NS LRREK + +++E F +
Sbjct: 5 RLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWAKPFTS 64
Query: 59 KLREER 64
K+++ R
Sbjct: 65 KVKQMR 70
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/313 (66%), Positives = 240/313 (76%), Gaps = 26/313 (8%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
A REERDVLV GD +WIT LHYAFQD+++LYLVMDYY GGDLLTLLSKFED+LPEDMA
Sbjct: 134 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 193
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FYI EMVLAI SIH LHYVHR DIKPDNVLLD NGHIRLADFGSCL++
Sbjct: 194 RFYIGEMVLAIDSIHQLHYVHR----------DIKPDNVLLDVNGHIRLADFGSCLKMND 243
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
DGTVQS+VAVGTPDYISPEIL AME+G G+YGPECDWWSLGVCMYEMLYGETPFYAESLV
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSL 296
ETYGKIMNH+ F PS V ++S++AKDL++RLICS + RLGQNGI DFK
Sbjct: 304 ETYGKIMNHEERFQFPSHVT-DVSEEAKDLIQRLICSRERRLGQNGIEDFK--------- 353
Query: 297 SISPRNHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAGVRXXXXXXXXXXXXXX 356
H +F+G+ W++IR+ APYIP+VSSP+DTS+FDVD+ +R
Sbjct: 354 -----KHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLR-NTEILPPGSHTGF 407
Query: 357 XXXHLPFVGFTFT 369
HLPF+GFTFT
Sbjct: 408 SGLHLPFIGFTFT 420
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 3 RLRELEALFLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFV 57
RL++LE L L GP + + S+ETLLD+L+ LY EC +S+LRR+K V++F+E+
Sbjct: 22 RLKKLEQLLLDGPWRNES-ALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWA 75
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 417 bits (1071), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/313 (66%), Positives = 240/313 (76%), Gaps = 26/313 (8%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
A REERDVLV GD +WIT LHYAFQD+++LYLVMDYY GGDLLTLLSKFED+LPEDMA
Sbjct: 118 TACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA 177
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FYI EMVLAI SIH LHYVHR DIKPDNVLLD NGHIRLADFGSCL++
Sbjct: 178 RFYIGEMVLAIDSIHQLHYVHR----------DIKPDNVLLDVNGHIRLADFGSCLKMND 227
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
DGTVQS+VAVGTPDYISPEIL AME+G G+YGPECDWWSLGVCMYEMLYGETPFYAESLV
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSL 296
ETYGKIMNH+ F PS V ++S++AKDL++RLICS + RLGQNGI DFK
Sbjct: 288 ETYGKIMNHEERFQFPSHVT-DVSEEAKDLIQRLICSRERRLGQNGIEDFK--------- 337
Query: 297 SISPRNHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAGVRXXXXXXXXXXXXXX 356
H +F+G+ W++IR+ APYIP+VSSP+DTS+FDVD+ +R
Sbjct: 338 -----KHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLR-NTEILPPGSHTGF 391
Query: 357 XXXHLPFVGFTFT 369
HLPF+GFTFT
Sbjct: 392 SGLHLPFIGFTFT 404
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 3 RLRELEALFLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFV 57
RL++LE L L GP + + S+ETLLD+L+ LY EC +S+LRR+K V++F+E+
Sbjct: 6 RLKKLEQLLLDGPWRNES-ALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWA 59
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 317 bits (813), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 170/319 (53%), Positives = 215/319 (67%), Gaps = 31/319 (9%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V+ REERDVLV GDRRWIT LH+AFQD++ LYLVM+YY GGDLLTLLSKF +R+P +MA
Sbjct: 105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY+AE+V+AI S+H L YVH RDIKPDN+LLD GHIRLADFGSCL+L
Sbjct: 165 RFYLAEIVMAIDSVHRLGYVH----------RDIKPDNILLDRCGHIRLADFGSCLKLRA 214
Query: 177 DGTVQSNVAVGTPDYISPEILTAM--EEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES 234
DGTV+S VAVGTPDY+SPEIL A+ G G YGPECDWW+LGV YEM YG+TPFYA+S
Sbjct: 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274
Query: 235 LVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFV 294
ETYGKI++++ LP V + ++A+D ++RL+C +TRLG+ G DF
Sbjct: 275 TAETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLCPPETRLGRGGAGDF-------- 325
Query: 295 SLSISPRNHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAG----VRXXXXXXXX 350
R HP+F G+ WD +RDS P+ P+ TDT +FD+ E G V
Sbjct: 326 ------RTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSD 379
Query: 351 XXXXXXXXXHLPFVGFTFT 369
HLPFVG++++
Sbjct: 380 IREGAPLGVHLPFVGYSYS 398
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 198/307 (64%), Gaps = 30/307 (9%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EERD++ + + W+ L YAFQDD LY+VM+Y GGDL+ L+S ++ +PE A+FY A
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTA 180
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+VLA+ +IH + ++HR D+KPDN+LLD +GH++LADFG+C+++ +G V+
Sbjct: 181 EVVLALDAIHSMGFIHR----------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ AVGTPDYISPE+L + + G G YG ECDWWS+GV +YEML G+TPFYA+SLV TY K
Sbjct: 231 CDTAVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 289
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPR 301
IMNH+NS P D +IS +AK+L+ + + RLG+NG+ + K LF +
Sbjct: 290 IMNHKNSLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIK--RHLFF------K 339
Query: 302 NHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAGVRXXXXXXXXXXXXXXXXXHL 361
N W AW+++RD+ AP +P++SS DTS+FD E L
Sbjct: 340 NDQW----AWETLRDTVAPVVPDLSSDIDTSNFDDLE---EDKGEEETFPIPKAFVGNQL 392
Query: 362 PFVGFTF 368
PFVGFT+
Sbjct: 393 PFVGFTY 399
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 198/307 (64%), Gaps = 30/307 (9%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EERD++ + + W+ L YAFQDD LY+VM+Y GGDL+ L+S ++ +PE A+FY A
Sbjct: 118 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTA 175
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+VLA+ +IH + ++HR D+KPDN+LLD +GH++LADFG+C+++ +G V+
Sbjct: 176 EVVLALDAIHSMGFIHR----------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 225
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ AVGTPDYISPE+L + + G G YG ECDWWS+GV +YEML G+TPFYA+SLV TY K
Sbjct: 226 CDTAVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 284
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPR 301
IMNH+NS P D +IS +AK+L+ + + RLG+NG+ + K LF +
Sbjct: 285 IMNHKNSLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIK--RHLFF------K 334
Query: 302 NHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAGVRXXXXXXXXXXXXXXXXXHL 361
N W AW+++RD+ AP +P++SS DTS+FD E L
Sbjct: 335 NDQW----AWETLRDTVAPVVPDLSSDIDTSNFDDLE---EDKGEEETFPIPKAFVGNQL 387
Query: 362 PFVGFTF 368
PFVGFT+
Sbjct: 388 PFVGFTY 394
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/307 (45%), Positives = 198/307 (64%), Gaps = 30/307 (9%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EERD++ + + W+ L YAFQDD LY+VM+Y GGDL+ L+S ++ +PE A+FY A
Sbjct: 123 EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTA 180
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+VLA+ +IH + ++HR D+KPDN+LLD +GH++LADFG+C+++ +G V+
Sbjct: 181 EVVLALDAIHSMGFIHR----------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR 230
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ AVGTPDYISPE+L + + G G YG ECDWWS+GV +YEML G+TPFYA+SLV TY K
Sbjct: 231 CDTAVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 289
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPR 301
IMNH+NS P D +IS +AK+L+ + + RLG+NG+ + K LF +
Sbjct: 290 IMNHKNSLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIK--RHLFF------K 339
Query: 302 NHPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDEAGVRXXXXXXXXXXXXXXXXXHL 361
N W AW+++RD+ AP +P++SS DTS+FD E L
Sbjct: 340 NDQW----AWETLRDTVAPVVPDLSSDIDTSNFDDLE---EDKGEEETFPIPKAFVGNQL 392
Query: 362 PFVGFTF 368
PFVGFT+
Sbjct: 393 PFVGFTY 399
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 194/311 (62%), Gaps = 38/311 (12%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EERD++ + + W+ L AFQDD LY+VM+Y GGDL+ L+S ++ +PE AKFY A
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFYTA 181
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+VLA+ +IH + +HR D+KPDN+LLD +GH++LADFG+C+++ G V
Sbjct: 182 EVVLALDAIHSMGLIHR----------DVKPDNMLLDKHGHLKLADFGTCMKMDETGMVH 231
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ AVGTPDYISPE+L + + G G YG ECDWWS+GV ++EML G+TPFYA+SLV TY K
Sbjct: 232 CDTAVGTPDYISPEVLKS-QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK 290
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPR 301
IM+H+NS P D EIS AK+L+ + + RLG+NG+ + K
Sbjct: 291 IMDHKNSLCFPEDA--EISKHAKNLICAFLTDREVRLGRNGVEEIK-------------- 334
Query: 302 NHPWFQGIA--WDSIRDSNAPYIPEVSSPTDTSHFD--VDEAGVRXXXXXXXXXXXXXXX 357
HP+F+ WD+IR++ AP +PE+SS D+S+FD D+ G
Sbjct: 335 QHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKG-----DVETFPIPKAFV 389
Query: 358 XXHLPFVGFTF 368
LPF+GFT+
Sbjct: 390 GNQLPFIGFTY 400
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 168/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GGD+ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ADFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 168/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GGD+ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ADFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLAGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 154/298 (51%), Gaps = 48/298 (16%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
L++E V ++ V +ER +L +I + FQD ++++MDY GG+L +L
Sbjct: 39 LKKEIVVR--LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 96
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
L K R P +AKFY AE+ LA+ +H ++R D+KP+N+LLD NGHI
Sbjct: 97 LRK-SQRFPNPVAKFYAAEVCLALEYLHSKDIIYR----------DLKPENILLDKNGHI 145
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG + D T GTPDYI+PE+++ Y DWWS G+ +YEM
Sbjct: 146 KITDFGFA-KYVPDVTYX---LCGTPDYIAPEVVSTKP-----YNKSIDWWSFGILIYEM 196
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSS-DTRLG--Q 280
L G TPFY + ++TY KI+N + F P ++D KDL+ RLI RLG Q
Sbjct: 197 LAGYTPFYDSNTMKTYEKILNAELRFP-PF-----FNEDVKDLLSRLITRDLSQRLGNLQ 250
Query: 281 NGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPT-DTSHFD 335
NG D K NHPWF+ + W+ + R+ PY P + DTS FD
Sbjct: 251 NGTEDVK--------------NHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFD 294
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLXGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L Y+F+D+S
Sbjct: 57 VMLVKHKETGNHFAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFAEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII--LSKG--- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 168/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ADFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 52 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 109
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 110 NLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 160
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 161 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 209
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 263
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 264 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 309
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 310 IPKFKGPGDTSNFD 323
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 44 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 101
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 102 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 152
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 153 --DLKPENLLIDEQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 255
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 256 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 301
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 302 IPKFKGPGDTSNFD 315
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 78 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 186
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 187 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 235
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 289
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 335
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 336 IPKFKGPGDTSNFD 349
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 166/314 (52%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 78 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 186
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G + GTP+Y++PEI+ + +G
Sbjct: 187 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCGTPEYLAPEIILS----KG- 235
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 289
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 335
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 336 IPKFKGPGDTSNFD 349
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLIIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIIIS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++T L ++F+D+S
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++T L ++F+D+S
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 78 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 186
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 187 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 235
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 289
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 290 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 335
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 336 IPKFKGPGDTSNFD 349
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++T L ++F+D+S
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII--LSKG--- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +Y+M G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 50 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 158
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 159 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 207
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 261
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 262 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 307
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 308 IPKFKGPGDTSNFD 321
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 166/314 (52%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDTRLG---QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T+ +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKAFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 50 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 158
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 159 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 207
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 261
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 262 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 307
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 308 IPKFKGPGDTSNFD 321
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L Y+F+D+S
Sbjct: 57 VMLVKHKETGNHFAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G ++G+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L Y+F+D+S
Sbjct: 57 VMLVKHKETGNHFAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G ++G+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 51/290 (17%)
Query: 57 VAKLRE------ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR 110
V KL+E E+ +L + ++ L ++F+D+SNLY+VM+Y GG++ + L + R
Sbjct: 79 VVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI-GR 137
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGS 170
E A+FY A++VL +H L ++R D+KP+N+++D G+I++ DFG
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYR----------DLKPENLMIDQQGYIKVTDFGL 187
Query: 171 CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
R+ G ++ GTP+Y++PEI+ + +G Y DWW+LGV +YEM G PF
Sbjct: 188 AKRVKG----RTWXLCGTPEYLAPEIILS----KG-YNKAVDWWALGVLIYEMAAGYPPF 238
Query: 231 YAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLG--QNGIADFK 287
+A+ ++ Y KI++ + F PS S D KDL+R L+ T R G +NG+ D K
Sbjct: 239 FADQPIQIYEKIVSGKVRF--PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 292
Query: 288 MWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
NH WF W +I R AP+IP+ P DTS+FD
Sbjct: 293 --------------NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 166/314 (52%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++P I+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPAII--LSKG--- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ + + ++ L ++F+D+S
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+V++Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVLEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ADFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 51/290 (17%)
Query: 57 VAKLRE------ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR 110
V KL+E E+ +L + ++ L ++F+D+SNLY+VM+Y GG++ + L + R
Sbjct: 79 VVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRI-GR 137
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGS 170
E A+FY A++VL +H L ++R D+KP+N+++D G+I++ DFG
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLDLIYR----------DLKPENLMIDQQGYIQVTDFGL 187
Query: 171 CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
R+ G ++ GTP+Y++PEI+ + +G Y DWW+LGV +YEM G PF
Sbjct: 188 AKRVKG----RTWXLCGTPEYLAPEIILS----KG-YNKAVDWWALGVLIYEMAAGYPPF 238
Query: 231 YAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLG--QNGIADFK 287
+A+ ++ Y KI++ + F PS S D KDL+R L+ T R G +NG+ D K
Sbjct: 239 FADQPIQIYEKIVSGKVRF--PS----HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 292
Query: 288 MWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
NH WF W +I R AP+IP+ P DTS+FD
Sbjct: 293 --------------NHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFD 328
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRI-GRFXEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 166/314 (52%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 58 VMLVKHKETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 166
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 167 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 215
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 269
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D NH WF W +I R AP+
Sbjct: 270 LRNLLQVDLTKRFGNLKNGVNDI--------------XNHKWFATTDWIAIYQRKVEAPF 315
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 316 IPKFKGPGDTSNFD 329
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 166/314 (52%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+ ++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEALAPEII--LSKG--- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+++D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLMIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G +NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G ++G+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 43 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 100
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 101 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 151
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 152 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILS----KG- 200
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 254
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G ++G+ D K NH WF W +I R AP+
Sbjct: 255 LRNLLQVDLTKRFGNLKDGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 300
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 301 IPKFKGPGDTSNFD 314
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHKESGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEII--LSKG--- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLGQ--NGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G NG+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLPNGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+ D
Sbjct: 315 IPKFKGPGDTSNAD 328
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 51/314 (16%)
Query: 31 ILLVLYDECCN----SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDS 86
++LV + E N L ++K V ++ + E+ +L + ++ L ++F+D+S
Sbjct: 57 VMLVKHMETGNHYAMKILDKQKVVK--LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NLY+VM+Y GG++ + L + R E A+FY A++VL +H L ++R
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYR-------- 165
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP+N+L+D G+I++ DFG R+ G ++ GTP+Y++PEI+ + +G
Sbjct: 166 --DLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILS----KG- 214
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
Y DWW+LGV +YEM G PF+A+ ++ Y KI++ + F PS S D KDL
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF--PS----HFSSDLKDL 268
Query: 267 MRRLICSSDT-RLG--QNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPY 321
+R L+ T R G ++G+ D K NH WF W +I R AP+
Sbjct: 269 LRNLLQVDLTKRFGNLKDGVNDIK--------------NHKWFATTDWIAIYQRKVEAPF 314
Query: 322 IPEVSSPTDTSHFD 335
IP+ P DTS+FD
Sbjct: 315 IPKFKGPGDTSNFD 328
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 145/283 (51%), Gaps = 42/283 (14%)
Query: 58 AKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAK 117
+ + ERD+LV + +I LHYAFQ + LYL++D+ GGDL T LSK E E+ K
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVK 129
Query: 118 FYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD 177
FY+AE+ LA+ +H L ++ RD+KP+N+LLD GHI+L DFG + D
Sbjct: 130 FYLAELALALDHLHSLGIIY----------RDLKPENILLDEEGHIKLTDFGLS-KESID 178
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
++ GT +Y++PE++ R + DWWS GV M+EML G PF + E
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVN-----RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQ--NGIADFKMWSALFV 294
T I+ + +P +S +A+ L+R L + RLG +G+ + K
Sbjct: 234 TMTMIL--KAKLGMPQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK------- 280
Query: 295 SLSISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
H +F I W+ + R+ + P+ P P DT +FD
Sbjct: 281 -------RHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFD 316
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 145/281 (51%), Gaps = 36/281 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
A + ER++L +I +L YAFQ LYL+++Y GG+L L + E ED A
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTA 123
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
FY+AE+ +A+ +H ++R D+KP+N++L+ GH++L DFG C
Sbjct: 124 CFYLAEISMALGHLHQKGIIYR----------DLKPENIMLNHQGHVKLTDFGLCKESIH 173
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
DGTV ++ GT +Y++PEIL M G R DWWSLG MY+ML G PF E+
Sbjct: 174 DGTV-THTFCGTIEYMAPEIL--MRSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRK 227
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSL 296
+T KI+ + +LP + E D K L++R ++ +RLG G D A
Sbjct: 228 KTIDKIL--KCKLNLPPYLTQEARDLLKKLLKR---NAASRLGA-GPGDAGEVQA----- 276
Query: 297 SISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
HP+F+ I W+ + R P+ P + S D S FD
Sbjct: 277 ------HPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 145/281 (51%), Gaps = 36/281 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
A + ER++L +I +L YAFQ LYL+++Y GG+L L + E ED A
Sbjct: 65 TAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTA 123
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
FY+AE+ +A+ +H ++R D+KP+N++L+ GH++L DFG C
Sbjct: 124 CFYLAEISMALGHLHQKGIIYR----------DLKPENIMLNHQGHVKLTDFGLCKESIH 173
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
DGTV ++ GT +Y++PEIL M G R DWWSLG MY+ML G PF E+
Sbjct: 174 DGTV-THXFCGTIEYMAPEIL--MRSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRK 227
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSL 296
+T KI+ + +LP + E D K L++R ++ +RLG G D A
Sbjct: 228 KTIDKIL--KCKLNLPPYLTQEARDLLKKLLKR---NAASRLGA-GPGDAGEVQA----- 276
Query: 297 SISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
HP+F+ I W+ + R P+ P + S D S FD
Sbjct: 277 ------HPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFD 311
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 141/277 (50%), Gaps = 40/277 (14%)
Query: 63 ERDVLVYGDRR-WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
ER+VL+ + ++ LH++FQ LY V+DY GG+L L + E E A+FY A
Sbjct: 88 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAA 146
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+ A+ +H L+ V+R D+KP+N+LLD+ GHI L DFG C + +
Sbjct: 147 EIASALGYLHSLNIVYR----------DLKPENILLDSQGHIVLTDFGLC-KENIEHNST 195
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
++ GTP+Y++PE+L + Y DWW LG +YEMLYG PFY+ + E Y
Sbjct: 196 TSTFCGTPEYLAPEVL-----HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 250
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVSLSISP 300
I+N P + I++ A+ L+ L+ T RLG DF +
Sbjct: 251 ILNK------PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD--DF-----------MEI 291
Query: 301 RNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
++H +F I WD + + P+ P VS P D HFD
Sbjct: 292 KSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFD 328
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 42/277 (15%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
E+R + + + ++T++ FQ NL+ VM+Y GGDL+ + + A FY A
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAA 125
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E++L + +H V+R D+K DN+LLD +GHI++ADFG C + G +
Sbjct: 126 EIILGLQFLHSKGIVYR----------DLKLDNILLDKDGHIKIADFGMC-KENMLGDAK 174
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+N GTPDYI+PEIL +Y DWWS GV +YEML G++PF+ + E +
Sbjct: 175 TNXFCGTPDYIAPEILLGQ-----KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF-- 227
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRL-ICSSDTRLGQNGIADFKMWSALFVSLSISP 300
H D P + + +AKDL+ +L + + RLG G
Sbjct: 228 ---HSIRMDNPFYPRW-LEKEAKDLLVKLFVREPEKRLGVRG----------------DI 267
Query: 301 RNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
R HP F+ I W+ + ++ + P+ P+V SP D S+FD
Sbjct: 268 RQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 304
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 42/277 (15%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
E+R + + + ++T++ FQ NL+ VM+Y GGDL+ + + A FY A
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAA 126
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E++L + +H V+R D+K DN+LLD +GHI++ADFG C + G +
Sbjct: 127 EIILGLQFLHSKGIVYR----------DLKLDNILLDKDGHIKIADFGMC-KENMLGDAK 175
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+N GTPDYI+PEIL +Y DWWS GV +YEML G++PF+ + E +
Sbjct: 176 TNEFCGTPDYIAPEILLGQ-----KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF-- 228
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRL-ICSSDTRLGQNGIADFKMWSALFVSLSISP 300
H D P + + +AKDL+ +L + + RLG G
Sbjct: 229 ---HSIRMDNPFYPRW-LEKEAKDLLVKLFVREPEKRLGVRG----------------DI 268
Query: 301 RNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
R HP F+ I W+ + ++ + P+ P+V SP D S+FD
Sbjct: 269 RQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 305
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 143/284 (50%), Gaps = 42/284 (14%)
Query: 58 AKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAK 117
+ + ERD+L + ++ LHYAFQ + LYL++D+ GGDL T LSK E E+ K
Sbjct: 75 VRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVK 133
Query: 118 FYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD 177
FY+AE+ L + +H L ++ RD+KP+N+LLD GHI+L DFG + D
Sbjct: 134 FYLAELALGLDHLHSLGIIY----------RDLKPENILLDEEGHIKLTDFGLS-KEAID 182
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
++ GT +Y++PE++ R + DWWS GV M+EML G PF + E
Sbjct: 183 HEKKAYSFCGTVEYMAPEVVN-----RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKE 237
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQ--NGIADFKMWSALFV 294
T I+ + +P +S +A+ L+R L + RLG +G + K
Sbjct: 238 TMTLIL--KAKLGMPQ----FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIK------- 284
Query: 295 SLSISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFDV 336
H ++ I W+ + R+ P+ P V+ P DT +FD
Sbjct: 285 -------RHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFDT 321
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 144/281 (51%), Gaps = 37/281 (13%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFY 119
+ E+R + + + ++T L FQ L+ VM++ GGDL+ + K R E A+FY
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFY 129
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
AE++ A+ +HD ++R D+K DNVLLD GH +LADFG C + G
Sbjct: 130 AAEIISALMFLHDKGIIYR----------DLKLDNVLLDHEGHCKLADFGMC-KEGICNG 178
Query: 180 VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 239
V + GTPDYI+PEIL M YGP DWW++GV +YEML G PF AE+ + +
Sbjct: 179 VTTATFCGTPDYIAPEILQEM-----LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233
Query: 240 GKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVSLSI 298
I+N + + P+ + +DA +++ + + T RLG +L
Sbjct: 234 EAILNDEVVY--PT----WLHEDATGILKSFMTKNPTMRLG-----------SLTQGGEH 276
Query: 299 SPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFDVD 337
+ HP+F+ I W + R P+ P + S D S+FD D
Sbjct: 277 AILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPD 317
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 30/292 (10%)
Query: 46 REKTVSDFIEFVAKLREERDVLVYGDRR-WITNLHYAFQDDSNLYLVMDYYCGGDLLTLL 104
++ T+ + R ER VL + + ++ LHYAFQ ++ L+L++DY GG+L T L
Sbjct: 91 KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 105 SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIR 164
S+ E R E + Y+ E+VLA+ +H L ++R DIK +N+LLD+NGH+
Sbjct: 151 SQRE-RFTEHEVQIYVGEIVLALEHLHKLGIIYR----------DIKLENILLDSNGHVV 199
Query: 165 LADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
L DFG D T ++ GT +Y++P+I+ + G + DWWSLGV MYE+L
Sbjct: 200 LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDK---AVDWWSLGVLMYELL 256
Query: 225 YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIA 284
G +PF + + +I + P E+S AKDL++RL+ + G
Sbjct: 257 TGASPFTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPR 314
Query: 285 DFKMWSALFVSLSISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHF 334
D + + H +FQ I WD + + AP+ P + D S+F
Sbjct: 315 D-----------ADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 139/271 (51%), Gaps = 42/271 (15%)
Query: 58 AKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAK 117
+ + ERD+LV + +I LHYAFQ + LYL++D+ GGDL T LSK E E+ K
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVK 129
Query: 118 FYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD 177
FY+AE+ LA+ +H L ++ RD+KP+N+LLD GHI+L DFG + D
Sbjct: 130 FYLAELALALDHLHSLGIIY----------RDLKPENILLDEEGHIKLTDFGLS-KESID 178
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
++ GT +Y++PE++ R + DWWS GV M+EML G PF + E
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVN-----RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQ--NGIADFKMWSALFV 294
T I+ + +P +S +A+ L+R L + RLG +G+ + K
Sbjct: 234 TMTMIL--KAKLGMPQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK------- 280
Query: 295 SLSISPRNHPWFQGIAWDSI--RDSNAPYIP 323
H +F I W+ + R+ + P+ P
Sbjct: 281 -------RHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 139/271 (51%), Gaps = 42/271 (15%)
Query: 58 AKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAK 117
+ + ERD+LV + +I LHYAFQ + LYL++D+ GGDL T LSK E E+ K
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVK 130
Query: 118 FYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD 177
FY+AE+ LA+ +H L ++ RD+KP+N+LLD GHI+L DFG + D
Sbjct: 131 FYLAELALALDHLHSLGIIY----------RDLKPENILLDEEGHIKLTDFGLS-KESID 179
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
++ GT +Y++PE++ R + DWWS GV M+EML G PF + E
Sbjct: 180 HEKKAYSFCGTVEYMAPEVVN-----RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 234
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQ--NGIADFKMWSALFV 294
T I+ + +P +S +A+ L+R L + RLG +G+ + K
Sbjct: 235 TMTMIL--KAKLGMPQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK------- 281
Query: 295 SLSISPRNHPWFQGIAWDSI--RDSNAPYIP 323
H +F I W+ + R+ + P+ P
Sbjct: 282 -------RHSFFSTIDWNKLYRREIHPPFKP 305
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 150/321 (46%), Gaps = 53/321 (16%)
Query: 17 QGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWIT 76
+ GR ++++ L ++V DE VA E VL ++T
Sbjct: 170 KATGRYYAMKILKKEVIVAKDE------------------VAHTLTENRVLQNSRHPFLT 211
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
L Y+FQ L VM+Y GG+L LS+ E ED A+FY AE+V A L Y+
Sbjct: 212 ALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA------LDYL 264
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI 196
H + + RD+K +N++LD +GHI++ DFG C DG GTP+Y++PE+
Sbjct: 265 HSEKNVVY---RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEV 320
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
L + YG DWW LGV MYEM+ G PFY + + + I+ + F P +G
Sbjct: 321 LEDND-----YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF--PRTLG 373
Query: 257 YEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSIRD 316
E AK L+ L+ + G D K H +F GI W + +
Sbjct: 374 PE----AKSLLSGLLKKDPKQRLGGGSEDAK-----------EIMQHRFFAGIVWQHVYE 418
Query: 317 S--NAPYIPEVSSPTDTSHFD 335
+ P+ P+V+S TDT +FD
Sbjct: 419 KKLSPPFKPQVTSETDTRYFD 439
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 150/321 (46%), Gaps = 53/321 (16%)
Query: 17 QGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWIT 76
+ GR ++++ L ++V DE VA E VL ++T
Sbjct: 30 KATGRYYAMKILKKEVIVAKDE------------------VAHTLTENRVLQNSRHPFLT 71
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
L Y+FQ L VM+Y GG+L LS+ E ED A+FY AE+V A L Y+
Sbjct: 72 ALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA------LDYL 124
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI 196
H + + RD+K +N++LD +GHI++ DFG C DG GTP+Y++PE+
Sbjct: 125 HSEKNVVY---RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEV 180
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
L + GR DWW LGV MYEM+ G PFY + + + I+ + F P +G
Sbjct: 181 LEDNDYGRA-----VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF--PRTLG 233
Query: 257 YEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSIRD 316
E AK L+ L+ + G D K H +F GI W + +
Sbjct: 234 PE----AKSLLSGLLKKDPKQRLGGGSEDAK-----------EIMQHRFFAGIVWQHVYE 278
Query: 317 S--NAPYIPEVSSPTDTSHFD 335
+ P+ P+V+S TDT +FD
Sbjct: 279 KKLSPPFKPQVTSETDTRYFD 299
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 150/321 (46%), Gaps = 53/321 (16%)
Query: 17 QGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWIT 76
+ GR ++++ L ++V DE VA E VL ++T
Sbjct: 173 KATGRYYAMKILKKEVIVAKDE------------------VAHTLTENRVLQNSRHPFLT 214
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
L Y+FQ L VM+Y GG+L LS+ E ED A+FY AE+V A L Y+
Sbjct: 215 ALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA------LDYL 267
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI 196
H + + RD+K +N++LD +GHI++ DFG C DG GTP+Y++PE+
Sbjct: 268 HSEKNVVY---RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEV 323
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
L + YG DWW LGV MYEM+ G PFY + + + I+ + F P +G
Sbjct: 324 LEDND-----YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF--PRTLG 376
Query: 257 YEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSIRD 316
E AK L+ L+ + G D K H +F GI W + +
Sbjct: 377 PE----AKSLLSGLLKKDPKQRLGGGSEDAK-----------EIMQHRFFAGIVWQHVYE 421
Query: 317 S--NAPYIPEVSSPTDTSHFD 335
+ P+ P+V+S TDT +FD
Sbjct: 422 KKLSPPFKPQVTSETDTRYFD 442
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 150/321 (46%), Gaps = 53/321 (16%)
Query: 17 QGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWIT 76
+ GR ++++ L ++V DE VA E VL ++T
Sbjct: 31 KATGRYYAMKILKKEVIVAKDE------------------VAHTLTENRVLQNSRHPFLT 72
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
L Y+FQ L VM+Y GG+L LS+ E ED A+FY AE+V A L Y+
Sbjct: 73 ALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA------LDYL 125
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI 196
H + + RD+K +N++LD +GHI++ DFG C DG GTP+Y++PE+
Sbjct: 126 HSEKNVVY---RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEV 181
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
L + GR DWW LGV MYEM+ G PFY + + + I+ + F P +G
Sbjct: 182 LEDNDYGRA-----VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF--PRTLG 234
Query: 257 YEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSIRD 316
E AK L+ L+ + G D K H +F GI W + +
Sbjct: 235 PE----AKSLLSGLLKKDPKQRLGGGSEDAK-----------EIMQHRFFAGIVWQHVYE 279
Query: 317 S--NAPYIPEVSSPTDTSHFD 335
+ P+ P+V+S TDT +FD
Sbjct: 280 KKLSPPFKPQVTSETDTRYFD 300
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 150/321 (46%), Gaps = 53/321 (16%)
Query: 17 QGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWIT 76
+ GR ++++ L ++V DE VA E VL ++T
Sbjct: 32 KATGRYYAMKILKKEVIVAKDE------------------VAHTLTENRVLQNSRHPFLT 73
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
L Y+FQ L VM+Y GG+L LS+ E ED A+FY AE+V A L Y+
Sbjct: 74 ALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSA------LDYL 126
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI 196
H + + RD+K +N++LD +GHI++ DFG C DG GTP+Y++PE+
Sbjct: 127 HSEKNVVY---RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC-GTPEYLAPEV 182
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
L + GR DWW LGV MYEM+ G PFY + + + I+ + F P +G
Sbjct: 183 LEDNDYGRA-----VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF--PRTLG 235
Query: 257 YEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSIRD 316
E AK L+ L+ + G D K H +F GI W + +
Sbjct: 236 PE----AKSLLSGLLKKDPKQRLGGGSEDAK-----------EIMQHRFFAGIVWQHVYE 280
Query: 317 S--NAPYIPEVSSPTDTSHFD 335
+ P+ P+V+S TDT +FD
Sbjct: 281 KKLSPPFKPQVTSETDTRYFD 301
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 133/281 (47%), Gaps = 47/281 (16%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
E+R + + G ++T LH FQ LY VM+Y GGDL+ + + R E A FY A
Sbjct: 391 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAA 449
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+ + + + ++R D+K DNV+LD+ GHI++ADFG C DG V
Sbjct: 450 EIAIGLFFLQSKGIIYR----------DLKLDNVMLDSEGHIKIADFGMCKENIWDG-VT 498
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ GTPDYI+PEI+ YG DWW+ GV +YEML G+ PF E E +
Sbjct: 499 TKXFCGTPDYIAPEIIAYQP-----YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLM-----RRLICSSDTRLGQNGIADFKMWSALFVSL 296
IM H ++ P + E K LM +RL C G G D K
Sbjct: 554 IMEHNVAY--PKSMSKEAVAICKGLMTKHPGKRLGC------GPEGERDIK--------- 596
Query: 297 SISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
H +F+ I W+ + ++ PY P+ S + +FD
Sbjct: 597 -----EHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFD 631
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 130/271 (47%), Gaps = 47/271 (17%)
Query: 63 ERDVLVYGDRR-WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
E+ VL D+ ++T LH FQ LY VM+Y GGDL+ + + + E A FY A
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAA 127
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+ + + +H ++ RD+K DNV+LD+ GHI++ADFG C DG V
Sbjct: 128 EISIGLFFLHKRGIIY----------RDLKLDNVMLDSEGHIKIADFGMCKEHMMDG-VT 176
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ GTPDYI+PEI+ YG DWW+ GV +YEML G+ PF E E +
Sbjct: 177 TREFCGTPDYIAPEIIAYQP-----YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQS 231
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLM-----RRLICSSDTRLGQNGIADFKMWSALFVSL 296
IM H S+ P + E K LM +RL C G G D
Sbjct: 232 IMEHNVSY--PKSLSKEAVSICKGLMTKHPAKRLGC------GPEGERDV---------- 273
Query: 297 SISPRNHPWFQGIAWDSI--RDSNAPYIPEV 325
R H +F+ I W+ + R+ P+ P+V
Sbjct: 274 ----REHAFFRRIDWEKLENREIQPPFKPKV 300
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 41 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 98
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 99 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 147
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 148 KITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 201
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 202 MCGRLPFYNQDHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRLGGGP 255
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 256 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 298
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 38 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 96 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 144
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 145 KITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 198
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 199 MCGRLPFYNQDHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRLGGGP 252
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 253 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 38 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 96 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 144
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 145 KITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 198
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 199 MCGRLPFYNQDHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRLGGGP 252
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 253 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 38 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 96 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 144
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 145 KITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 198
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 199 MCGRLPFYNQDHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRLGGGP 252
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 253 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 132/281 (46%), Gaps = 47/281 (16%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
E+R + + G ++T LH FQ LY VM+Y GGDL+ + + R E A FY A
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAA 128
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+ + + + ++R D+K DNV+LD+ GHI++ADFG C DG V
Sbjct: 129 EIAIGLFFLQSKGIIYR----------DLKLDNVMLDSEGHIKIADFGMCKENIWDG-VT 177
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+ GTPDYI+PEI+ YG DWW+ GV +YEML G+ PF E E +
Sbjct: 178 TKXFCGTPDYIAPEIIAYQP-----YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 232
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLM-----RRLICSSDTRLGQNGIADFKMWSALFVSL 296
IM H ++ P + E K LM +RL C G G D K
Sbjct: 233 IMEHNVAY--PKSMSKEAVAICKGLMTKHPGKRLGC------GPEGERDIK--------- 275
Query: 297 SISPRNHPWFQGIAWDSI--RDSNAPYIPEVSSPTDTSHFD 335
H +F+ I W+ + ++ PY P+ + +FD
Sbjct: 276 -----EHAFFRYIDWEKLERKEIQPPYKPKACG-RNAENFD 310
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 38 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 96 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 144
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 145 KITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 198
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 199 MCGRLPFYNQDHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRLGGGP 252
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 253 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 38 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 95
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 96 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 144
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 145 KITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 198
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 199 MCGRLPFYNQDHERLFELILMEEIRFPRT------LSPEAKSLLAGLLKKDPKQRLGGGP 252
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 253 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 38/294 (12%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
LR+E ++ + VA E VL ++T L YAFQ L VM+Y GG+L
Sbjct: 43 LRKEVIIAK--DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFH 100
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
LS+ E E+ A+FY AE+V A+ +H V+R DIK +N++LD +GHI
Sbjct: 101 LSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYR----------DIKLENLMLDKDGHI 149
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ DFG C DG GTP+Y++PE+L + GR DWW LGV MYEM
Sbjct: 150 KITDFGLCKEGISDGATMKXFC-GTPEYLAPEVLEDNDYGRA-----VDWWGLGVVMYEM 203
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGI 283
+ G PFY + + I+ + F +S +AK L+ L+ + G
Sbjct: 204 MCGRLPFYNQDHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRLGGGP 257
Query: 284 ADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSN--APYIPEVSSPTDTSHFD 335
+D K H +F I W + P+ P+V+S DT +FD
Sbjct: 258 SDAK-----------EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 300
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 48/275 (17%)
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
++ LH FQ +S L+ V++Y GGDL+ + + + +LPE+ A+FY AE+ LA+ +H+
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER 172
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
++R D+K DNVLLD+ GHI+L D+G C G S GTP+YI+
Sbjct: 173 GIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIA 221
Query: 194 PEILTAMEEGRGR-YGPECDWWSLGVCMYEMLYGETPF-------YAESLVETYGKIMNH 245
PEIL RG YG DWW+LGV M+EM+ G +PF + E Y +
Sbjct: 222 PEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275
Query: 246 QNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG---QNGIADFKMWSALFVSLSISPRN 302
+ +P + + + K + + RLG Q G AD +
Sbjct: 276 EKQIRIPRSLSVKAASVLKSFLNK---DPKERLGCHPQTGFADIQ--------------G 318
Query: 303 HPWFQGIAWDSIRDSNA--PYIPEVSSPTDTSHFD 335
HP+F+ + WD + P+ P +S +FD
Sbjct: 319 HPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 46/274 (16%)
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
++ LH FQ +S L+ V++Y GGDL+ + + + +LPE+ A+FY AE+ LA+ +H+
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER 140
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
++R D+K DNVLLD+ GHI+L D+G C G S GTP+YI+
Sbjct: 141 GIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIA 189
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF-------YAESLVETYGKIMNHQ 246
PEIL + YG DWW+LGV M+EM+ G +PF + E Y + +
Sbjct: 190 PEILRGED-----YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 244
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG---QNGIADFKMWSALFVSLSISPRNH 303
+P + + + K + + RLG Q G AD + H
Sbjct: 245 KQIRIPRSMSVKAASVLKSFLNK---DPKERLGCLPQTGFADIQ--------------GH 287
Query: 304 PWFQGIAWDSIRDSNA--PYIPEVSSPTDTSHFD 335
P+F+ + WD + P+ P +S +FD
Sbjct: 288 PFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 46/274 (16%)
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
++ LH FQ +S L+ V++Y GGDL+ + + + +LPE+ A+FY AE+ LA+ +H+
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER 125
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
++R D+K DNVLLD+ GHI+L D+G C G S GTP+YI+
Sbjct: 126 GIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIA 174
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF-------YAESLVETYGKIMNHQ 246
PEIL + YG DWW+LGV M+EM+ G +PF + E Y + +
Sbjct: 175 PEILRGED-----YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 229
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG---QNGIADFKMWSALFVSLSISPRNH 303
+P + + + K + + RLG Q G AD + H
Sbjct: 230 KQIRIPRSLSVKAASVLKSFLNK---DPKERLGCHPQTGFADIQ--------------GH 272
Query: 304 PWFQGIAWDSIRDSNA--PYIPEVSSPTDTSHFD 335
P+F+ + WD + P+ P +S +FD
Sbjct: 273 PFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 46/274 (16%)
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
++ LH FQ +S L+ V++Y GGDL+ + + + +LPE+ A+FY AE+ LA+ +H+
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER 129
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
++R D+K DNVLLD+ GHI+L D+G C G S GTP+YI+
Sbjct: 130 GIIYR----------DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC-GTPNYIA 178
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF-------YAESLVETYGKIMNHQ 246
PEIL + YG DWW+LGV M+EM+ G +PF + E Y + +
Sbjct: 179 PEILRGED-----YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG---QNGIADFKMWSALFVSLSISPRNH 303
+P + + + K + + RLG Q G AD + H
Sbjct: 234 KQIRIPRSLSVKAASVLKSFLNK---DPKERLGCHPQTGFADIQ--------------GH 276
Query: 304 PWFQGIAWDSIRDSNA--PYIPEVSSPTDTSHFD 335
P+F+ + WD + P+ P +S +FD
Sbjct: 277 PFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 37/313 (11%)
Query: 11 FLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG 70
F G I G+G FS L L + +R + + +V + ERDV+
Sbjct: 32 FKFGKILGEGS-FSTTVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRL 87
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + L++ FQDD LY + Y G+LL + K E +FY AE+V A+ +
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYL 146
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTP 189
H +H RD+KP+N+LL+ + HI++ DFG+ L + ++N VGT
Sbjct: 147 HGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 196
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y+SPE+LT + D W+LG +Y+++ G PF A + + KI+ + +
Sbjct: 197 QYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--Y 249
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
D P + A+DL+ +L+ T+ + G + + + L + HP+F+ +
Sbjct: 250 DFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--------KAHPFFESV 295
Query: 310 AWDSIRDSNAPYI 322
W+++ P +
Sbjct: 296 TWENLHQQTPPKL 308
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 37/313 (11%)
Query: 11 FLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG 70
F G I G+G FS L L + +R + + +V + ERDV+
Sbjct: 34 FKFGKILGEGS-FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRL 89
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + L++ FQDD LY + Y G+LL + K E +FY AE+V A+ +
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYL 148
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTP 189
H +H RD+KP+N+LL+ + HI++ DFG+ L + ++N VGT
Sbjct: 149 HGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 198
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y+SPE+LT + D W+LG +Y+++ G PF A + + KI+ + +
Sbjct: 199 QYVSPELLTEKSAXKS-----SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--Y 251
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
D P + A+DL+ +L+ T+ + G + + + L + HP+F+ +
Sbjct: 252 DFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--------KAHPFFESV 297
Query: 310 AWDSIRDSNAPYI 322
W+++ P +
Sbjct: 298 TWENLHQQTPPKL 310
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 54 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 112
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 113 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 162
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 217
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 218 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 266
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 267 -----KAHPFFESVTWENLHQQTPPKL 288
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 52 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 110
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 111 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 160
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 215
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 216 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 264
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 265 -----KAHPFFESVTWENLHQQTPPKL 286
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 53 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 111
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 112 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 161
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 216
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 217 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 265
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAP 320
+ HP+F+ + W+++ P
Sbjct: 266 -----KAHPFFESVTWENLHQQTPP 285
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 51 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 109
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 110 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 159
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 214
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 215 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 263
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 264 -----KAHPFFESVTWENLHQQTPPKL 285
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 37/313 (11%)
Query: 11 FLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG 70
F G I G+G FS L L + +R + + +V + ERDV+
Sbjct: 32 FKFGKILGEGS-FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRL 87
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + L++ FQDD LY + Y G+LL + K E +FY AE+V A+ +
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYL 146
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTP 189
H +H RD+KP+N+LL+ + HI++ DFG+ L + ++N VGT
Sbjct: 147 HGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTA 196
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y+SPE+LT + D W+LG +Y+++ G PF A + + KI+ + +
Sbjct: 197 QYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--Y 249
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
D P + A+DL+ +L+ T+ + G + + + L + HP+F+ +
Sbjct: 250 DFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--------KAHPFFESV 295
Query: 310 AWDSIRDSNAPYI 322
W+++ P +
Sbjct: 296 TWENLHQQTPPKL 308
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 58 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 116
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 117 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 166
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 221
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 222 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 270
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAP 320
+ HP+F+ + W+++ P
Sbjct: 271 -----KAHPFFESVTWENLHQQTPP 290
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 73 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 131
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 132 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 181
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 236
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 237 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 285
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAP 320
+ HP+F+ + W+++ P
Sbjct: 286 -----KAHPFFESVTWENLHQQTPP 305
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 74 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 132
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 133 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 182
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 238 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 286
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 287 -----KAHPFFESVTWENLHQQTPPKL 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 76 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 134
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 135 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 240 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 288
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 289 -----KAHPFFESVTWENLHQQTPPKL 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 74 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 132
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 133 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 182
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 237
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 238 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 286
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 287 -----KAHPFFESVTWENLHQQTPPKL 308
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 76 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 134
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 135 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 240 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 288
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 289 -----KAHPFFESVTWENLHQQTPPKL 310
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 76 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 134
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 135 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 240 GLIFAKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 288
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 289 -----KAHPFFESVTWENLHQQTPPKL 310
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 37/313 (11%)
Query: 11 FLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG 70
F G I G+G FS L L + +R + + +V + ERDV+
Sbjct: 35 FKFGKILGEGS-FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRL 90
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + L++ FQDD LY + Y G+LL + K E +FY AE+V A+ +
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYL 149
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTP 189
H +H RD+KP+N+LL+ + HI++ DFG+ L + ++N VGT
Sbjct: 150 HGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 199
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y+SPE+LT + D W+LG +Y+++ G PF A + + KI+ + +
Sbjct: 200 QYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--Y 252
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
D P + A+DL+ +L+ T+ + G + + + L + HP+F+ +
Sbjct: 253 DFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--------KAHPFFESV 298
Query: 310 AWDSIRDSNAPYI 322
W+++ P +
Sbjct: 299 TWENLHQQTPPKL 311
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 76 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 134
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 135 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 240 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 288
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 289 -----KAHPFFESVTWENLHQQTPPKL 310
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 81 VPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 139
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 140 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 189
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 244
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 245 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 293
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 294 -----KAHPFFESVTWENLHQQTPPKL 315
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 79 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 137
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 138 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 187
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 242
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P+ A+DL+ +L+ T+ + G + + + L
Sbjct: 243 YLIFQKIIKLE--YDFPA----AFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 291
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 292 -----KAHPFFESVTWENLHQQTPPKL 313
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 33/265 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G+LL + K E
Sbjct: 73 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCT 131
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 132 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 181
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNE 236
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 237 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 285
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAP 320
+ HP+F+ + W+++ P
Sbjct: 286 -----KAHPFFESVTWENLHQQTPP 305
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 146/313 (46%), Gaps = 37/313 (11%)
Query: 11 FLGGPIQGKGRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG 70
F G I G+G FS L L + +R + + +V + ERDV+
Sbjct: 35 FKFGKILGEGS-FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR---ERDVMSRL 90
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + L++ FQDD LY + Y G+LL + K E +FY AE+V A+ +
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYL 149
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTP 189
H +H RD+KP+N+LL+ + HI++ DFG+ L + ++N VGT
Sbjct: 150 HGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTA 199
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y+SPE+LT + D W+LG +Y+++ G PF A + + KI+ + +
Sbjct: 200 QYVSPELLTEKSACKS-----SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLE--Y 252
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
D P + A+DL+ +L+ T+ + G + + + L + HP+F+ +
Sbjct: 253 DFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--------KAHPFFESV 298
Query: 310 AWDSIRDSNAPYI 322
W+++ P +
Sbjct: 299 TWENLHQQTPPKL 311
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 33/267 (12%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
V + ERDV+ D + L++ FQDD LY + Y G LL + K E
Sbjct: 76 VPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI-GSFDETCT 134
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+FY AE+V A+ +H +H RD+KP+N+LL+ + HI++ DFG+ L
Sbjct: 135 RFYTAEIVSALEYLHGKGIIH----------RDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 177 DGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++N VGT Y+SPE+LT + D W+LG +Y+++ G PF A +
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKS-----SDLWALGCIIYQLVAGLPPFRAGNE 239
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVS 295
+ KI+ + +D P + A+DL+ +L+ T+ + G + + + L
Sbjct: 240 YLIFQKIIKLE--YDFPE----KFFPKARDLVEKLLVLDATK--RLGCEEMEGYGPL--- 288
Query: 296 LSISPRNHPWFQGIAWDSIRDSNAPYI 322
+ HP+F+ + W+++ P +
Sbjct: 289 -----KAHPFFESVTWENLHQQTPPKL 310
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 42 SSLRR--EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGD 99
+ +RR +K F+E V + ++E +++ D I L+ F+D++++YLVM+ GG+
Sbjct: 33 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE 92
Query: 100 LLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL-- 157
L + D A+ + +++ A+A H L+ HR D+KP+N L
Sbjct: 93 LFERVVHKRVFRESDAARI-MKDVLSAVAYCHKLNVAHR----------DLKPENFLFLT 141
Query: 158 -DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+ ++L DFG R +++ V GTP Y+SP++L G YGPECD WS
Sbjct: 142 DSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVL------EGLYGPECDEWSA 193
Query: 217 GVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT 276
GV MY +L G PF A + E KI + +F P +S A+ L+RRL+ S
Sbjct: 194 GVMMYVLLCGYPPFSAPTDXEVMLKI--REGTFTFPEKDWLNVSPQAESLIRRLLTKSPK 251
Query: 277 RLGQNGIADFKMWSALFVSLSISPRN 302
+ + A W LS SPRN
Sbjct: 252 QRITSLQALEHEW--FEKQLSSSPRN 275
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 42 SSLRR--EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGD 99
+ +RR +K F+E V + ++E +++ D I L+ F+D++++YLVM+ GG+
Sbjct: 50 TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE 109
Query: 100 LLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL-- 157
L + D A+ + +++ A+A H L+ HR D+KP+N L
Sbjct: 110 LFERVVHKRVFRESDAARI-MKDVLSAVAYCHKLNVAHR----------DLKPENFLFLT 158
Query: 158 -DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+ ++L DFG R +++ V GTP Y+SP++L G YGPECD WS
Sbjct: 159 DSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVL------EGLYGPECDEWSA 210
Query: 217 GVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT 276
GV MY +L G PF A + E KI + +F P +S A+ L+RRL+ S
Sbjct: 211 GVMMYVLLCGYPPFSAPTDXEVMLKI--REGTFTFPEKDWLNVSPQAESLIRRLLTKSPK 268
Query: 277 RLGQNGIADFKMWSALFVSLSISPRN 302
+ + A W LS SPRN
Sbjct: 269 QRITSLQALEHEW--FEKQLSSSPRN 292
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 116/242 (47%), Gaps = 35/242 (14%)
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
++ NL Y+FQD+ ++++V+D GGDL L + E+ K +I E+V+A+ + +
Sbjct: 76 FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQ 134
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
+HR D+KPDN+LLD +GH+ + DF L + Q GT Y++
Sbjct: 135 RIIHR----------DMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITTMAGTKPYMA 182
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNS-FDLP 252
PE+ ++ +G G Y DWWSLGV YE+L G P++ S + + + + P
Sbjct: 183 PEMFSS-RKGAG-YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP 240
Query: 253 SDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWD 312
S E+ K L+ + D R Q ++D + N P+ I WD
Sbjct: 241 SAWSQEMVSLLKKLLE---PNPDQRFSQ--LSDVQ--------------NFPYMNDINWD 281
Query: 313 SI 314
++
Sbjct: 282 AV 283
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 27/225 (12%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL-LTLLSKFEDRLPEDMAKFYIA 121
E+ +L + R++ +L YA++ L LV+ GGDL + + PE A FY A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+ + +H V+R D+KP+N+LLD +GHIR++D G + + T++
Sbjct: 294 EICCGLEDLHRERIVYR----------DLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
VGT Y++PE++ RY DWW+LG +YEM+ G++PF + K
Sbjct: 344 GR--VGTVGYMAPEVVK-----NERYTFSPDWWALGCLLYEMIAGQSPFQ-----QRKKK 391
Query: 242 IMNHQNS---FDLPSDVGYEISDDAKDLMRRLICSSDT-RLGQNG 282
I + ++P + S A+ L +L+C RLG G
Sbjct: 392 IKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRG 436
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 110/225 (48%), Gaps = 27/225 (12%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL-LTLLSKFEDRLPEDMAKFYIA 121
E+ +L + R++ +L YA++ L LV+ GGDL + + PE A FY A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
E+ + +H V+R D+KP+N+LLD +GHIR++D G + + T++
Sbjct: 294 EICCGLEDLHRERIVYR----------DLKPENILLDDHGHIRISDLGLAVHVPEGQTIK 343
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
VGT Y++PE++ RY DWW+LG +YEM+ G++PF + K
Sbjct: 344 GR--VGTVGYMAPEVVK-----NERYTFSPDWWALGCLLYEMIAGQSPFQ-----QRKKK 391
Query: 242 IMNHQNSF---DLPSDVGYEISDDAKDLMRRLICSSDT-RLGQNG 282
I + ++P + S A+ L +L+C RLG G
Sbjct: 392 IKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRG 436
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E ++L D I L +D S+ Y+V + Y GG+L + K R E A I +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQ 129
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFG--SCLRLGGD 177
+ I +H + VHR D+KP+N+LL++ I++ DFG +C +
Sbjct: 130 VFSGITYMHKHNIVHR----------DLKPENILLESKEKDCDIKIIDFGLSTCFQ---- 175
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
+ +GT YI+PE+L RG Y +CD WS GV +Y +L G PFY ++ +
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL------RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLS 297
++ + +FDLP ISDDAKDL+R+++ SL
Sbjct: 230 ILKRVETGKYAFDLPQ--WRTISDDAKDLIRKML-------------------TFHPSLR 268
Query: 298 ISPRN---HPWFQGIAWDSIRDSNAPYIPEVSSPTDTSHFDVDE 338
I+ HPW Q + ++ S+ P + S+ T+ F ++
Sbjct: 269 ITATQCLEHPWIQKYSSETPTISDLPSLE--SAMTNIRQFQAEK 310
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 44/272 (16%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP---EDMAKFY 119
E+ +L R+I +L YAF+ ++L LVM GGD+ + ++ P E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
A++V + +H + ++R D+KP+NVLLD +G++R++D G + L G
Sbjct: 295 TAQIVSGLEHLHQRNIIYR----------DLKPENVLLDDDGNVRISDLGLAVELKA-GQ 343
Query: 180 VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 239
++ GTP +++PE+L E Y D+++LGV +YEM+ PF A
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEE-----YDFSVDYFALGVTLYEMIAARGPFRARG----- 393
Query: 240 GKIMNHQ-NSFDLPSDVGY--EISDDAKDLMRRLICS-SDTRLG-QNGIADFKMWSALFV 294
K+ N + L V Y + S +KD L+ + RLG ++G D
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--------- 444
Query: 295 SLSISPRNHPWFQGIAWDSIRDS--NAPYIPE 324
R HP F+ I+W + P++P+
Sbjct: 445 ----GLRTHPLFRDISWRQLEAGMLTPPFVPD 472
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 44/272 (16%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP---EDMAKFY 119
E+ +L R+I +L YAF+ ++L LVM GGD+ + ++ P E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
A++V + +H + ++R D+KP+NVLLD +G++R++D G + L G
Sbjct: 295 TAQIVSGLEHLHQRNIIYR----------DLKPENVLLDDDGNVRISDLGLAVELKA-GQ 343
Query: 180 VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 239
++ GTP +++PE+L E Y D+++LGV +YEM+ PF A
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEE-----YDFSVDYFALGVTLYEMIAARGPFRARG----- 393
Query: 240 GKIMNHQ-NSFDLPSDVGY--EISDDAKDLMRRLICS-SDTRLG-QNGIADFKMWSALFV 294
K+ N + L V Y + S +KD L+ + RLG ++G D
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--------- 444
Query: 295 SLSISPRNHPWFQGIAWDSIRDS--NAPYIPE 324
R HP F+ I+W + P++P+
Sbjct: 445 ----GLRTHPLFRDISWRQLEAGMLTPPFVPD 472
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 108/214 (50%), Gaps = 28/214 (13%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E ++L D I L +D S+ Y+V + Y GG+L + K R E A I +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQ 129
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFG--SCLRLGGD 177
+ I +H + VHR D+KP+N+LL++ I++ DFG +C +
Sbjct: 130 VFSGITYMHKHNIVHR----------DLKPENILLESKEKDCDIKIIDFGLSTCFQ---- 175
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
+ +GT YI+PE+L RG Y +CD WS GV +Y +L G PFY ++ +
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL------RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
++ + +FDLP ISDDAKDL+R+++
Sbjct: 230 ILKRVETGKYAFDLPQ--WRTISDDAKDLIRKML 261
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 44/272 (16%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP---EDMAKFY 119
E+ +L R+I +L YAF+ ++L LVM GGD+ + ++ P E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
A++V + +H + ++R D+KP+NVLLD +G++R++D G + L G
Sbjct: 295 TAQIVSGLEHLHQRNIIYR----------DLKPENVLLDDDGNVRISDLGLAVELKA-GQ 343
Query: 180 VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 239
++ GTP +++PE+L E Y D+++LGV +YEM+ PF A
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEE-----YDFSVDYFALGVTLYEMIAARGPFRARG----- 393
Query: 240 GKIMNHQ-NSFDLPSDVGY--EISDDAKDLMRRLICS-SDTRLG-QNGIADFKMWSALFV 294
K+ N + L V Y + S +KD L+ + RLG ++G D
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--------- 444
Query: 295 SLSISPRNHPWFQGIAWDSIRDS--NAPYIPE 324
R HP F+ I+W + P++P+
Sbjct: 445 ----GLRTHPLFRDISWRQLEAGMLTPPFVPD 472
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 44/272 (16%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP---EDMAKFY 119
E+ +L R+I +L YAF+ ++L LVM GGD+ + ++ P E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
A++V + +H + ++R D+KP+NVLLD +G++R++D G + L G
Sbjct: 295 TAQIVSGLEHLHQRNIIYR----------DLKPENVLLDDDGNVRISDLGLAVELKA-GQ 343
Query: 180 VQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 239
++ GTP +++PE+L E Y D+++LGV +YEM+ PF A
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEE-----YDFSVDYFALGVTLYEMIAARGPFRARG----- 393
Query: 240 GKIMNHQ-NSFDLPSDVGY--EISDDAKDLMRRLICS-SDTRLG-QNGIADFKMWSALFV 294
K+ N + L V Y + S +KD L+ + RLG ++G D
Sbjct: 394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCD--------- 444
Query: 295 SLSISPRNHPWFQGIAWDSIRDS--NAPYIPE 324
R HP F+ I+W + P++P+
Sbjct: 445 ----GLRTHPLFRDISWRQLEAGMLTPPFVPD 472
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 108/214 (50%), Gaps = 28/214 (13%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E ++L D I L +D S+ Y+V + Y GG+L + K R E A I +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQ 129
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFG--SCLRLGGD 177
+ I +H + VHR D+KP+N+LL++ I++ DFG +C +
Sbjct: 130 VFSGITYMHKHNIVHR----------DLKPENILLESKEKDCDIKIIDFGLSTCFQ---- 175
Query: 178 GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
+ +GT YI+PE+L RG Y +CD WS GV +Y +L G PFY ++ +
Sbjct: 176 QNTKMKDRIGTAYYIAPEVL------RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229
Query: 238 TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
++ + +FDLP ISDDAKDL+R+++
Sbjct: 230 ILKRVETGKYAFDLPQ--WRTISDDAKDLIRKML 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K R E
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTAT 116
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL +NG +++ADFG +
Sbjct: 117 YITELANALSYCHSKRVIHR----------DIKPENLLLGSNGELKIADFGWSVHAPSS- 165
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ + GT DY+ PE++ EGR + + D WSLGV YE L G PF A + ET
Sbjct: 166 --RRDTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 219 YRRIS--RVEFTFPDFV----TEGARDLISRLL 245
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K R E
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SRFDEQRTAT 116
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL +NG +++ADFG +
Sbjct: 117 YITELANALSYCHSKRVIHR----------DIKPENLLLGSNGELKIADFGWSVHAPSS- 165
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G PF A + ET
Sbjct: 166 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 219 YRRI--SRVEFTFPDFV----TEGARDLISRLL 245
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G++ L K + E
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL-SKFDEQRTAT 117
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 118 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 166
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 167 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 220 YKRISRVE--FTFPDFV----TEGARDLISRLL 246
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 33/217 (15%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 110
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG-SCLRL 174
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG SC
Sbjct: 111 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSCHAP 160
Query: 175 GGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES 234
T S GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 161 SSRRTTLS----GTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
Query: 235 LVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 212 YQETYKRISRVE--FTFPDFV----TEGARDLISRLL 242
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 102/197 (51%), Gaps = 17/197 (8%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ +++ E + L + I L++ + + +++V++Y GG+L + +DRL E+
Sbjct: 52 LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIIS-QDRLSEEET 110
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+A +H Y HR D+KP+N+L D ++L DFG C + G
Sbjct: 111 RVVFRQIVSAVAYVHSQGYAHR----------DLKPENLLFDEYHKLKLIDFGLCAKPKG 160
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ G+ Y +PE++ +G+ G E D WS+G+ +Y ++ G PF ++++
Sbjct: 161 NKDYHLQTCCGSLAYAAPELI----QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM 216
Query: 237 ETYGKIMNHQNSFDLPS 253
Y KIM + +D+P
Sbjct: 217 ALYKKIM--RGKYDVPK 231
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G++ L K + E
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL-SKFDEQRTAT 117
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 118 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP--- 164
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 165 SSRRXXLXGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 220 YKRISRVE--FTFPDFV----TEGARDLISRLL 246
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 135
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 136 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 185
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 186 SS---RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 238 QETYKRISRVE--FTFPDFV----TEGARDLISRLL 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 117
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 118 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 166
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 167 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 220 YKRISRVE--FTFPDFV----TEGARDLISRLL 246
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 109
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 110 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 159
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 160 SS---RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 212 QETYKRISRVE--FTFPDFV----TEGARDLISRLL 241
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 23/205 (11%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L + + LYL+M+Y GG++ L R+ E A+ ++V A+ H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+K +N+LLDA+ +I++ADFG G + + G+P Y +P
Sbjct: 132 IVHR----------DLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DTFCGSPPYAAP 179
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+ +G+ GPE D WSLGV +Y ++ G PF ++L E +++ + + +P
Sbjct: 180 ELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIP-- 231
Query: 255 VGYEISDDAKDLMRRLICSSDTRLG 279
+ +S D ++L++R + + + G
Sbjct: 232 --FYMSTDCENLLKRFLVLNPIKRG 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 126
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 127 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 176
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 177 SS---RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 228
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 229 QETYKRISRVE--FTFPDFV----TEGARDLISRLL 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 110
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 111 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 160
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 161 SS---RRDTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 213 QETYKRISRVE--FTFPDFV----TEGARDLISRLL 242
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 115
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 116 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 164
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 165 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 218 YKRISRVE--FTFPDFV----TEGARDLISRLL 244
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 113
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 114 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH-- 161
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 162 -APSSRRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 215
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 216 QETYKRI--SRVEFTFPDFV----TEGARDLISRLL 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 111
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 112 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 160
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 161 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 214 YKRI--SRVEFTFPDFV----TEGARDLISRLL 240
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 109
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 110 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 158
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 159 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 212 YKRI--SRVEFTFPDFV----TEGARDLISRLL 238
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 115
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 116 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 164
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 165 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 218 YKRI--SRVEFTFPDFV----TEGARDLISRLL 244
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L + + LYL+M+Y GG++ L R+ E A+ ++V A+ H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+K +N+LLDA+ +I++ADFG G + + G P Y +P
Sbjct: 135 IVHR----------DLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGAPPYAAP 182
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+ +G+ GPE D WSLGV +Y ++ G PF ++L E +++ + + +P
Sbjct: 183 ELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIP-- 234
Query: 255 VGYEISDDAKDLMRRLICSSDTRLG 279
+ +S D ++L++R + + + G
Sbjct: 235 --FYMSTDCENLLKRFLVLNPIKRG 257
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 117
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 118 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 166
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE + EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 167 --RRTTLCGTLDYLPPEXI----EGRX-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 220 YKRIS--RVEFTFPDFV----TEGARDLISRLL 246
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 32/242 (13%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ ++ +LV D G+L L++ + L E + + ++ I ++H L+
Sbjct: 86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLN 144
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + +I+L DFG +L ++S GTP Y++P
Sbjct: 145 IVHR----------DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYLAP 192
Query: 195 EIL-TAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPS 253
EI+ +M + YG E D WS GV MY +L G PF+ + IM+ F P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 254 DVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDS 313
Y SD KDL+ R + + + AL HP+FQ +
Sbjct: 253 WDDY--SDTVKDLVSRFLVVQPQK-------RYTAEEAL---------AHPFFQQYVVEE 294
Query: 314 IR 315
+R
Sbjct: 295 VR 296
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 115
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 116 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH---AP 162
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 163 SSRRAALCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 218 YKRISRVE--FTFPDFV----TEGARDLISRLL 244
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 112
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 113 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSSR 162
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 163 RTE---LCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 215 YKRISRVE--FTFPDFV----TEGARDLISRLL 241
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 112
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 113 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 161
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 162 --RRTXLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 215 YKRI--SRVEFTFPDFV----TEGARDLISRLL 241
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 109
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 110 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 159
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 160 SS---RRAALCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 212 QETYKRI--SRVEFTFPDFV----TEGARDLISRLL 241
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 21/189 (11%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
++ +LY+V + G ++ + + L ED A+FY +++ I +H +HR
Sbjct: 109 NEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKIIHR----- 161
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEG 203
DIKP N+L+ +GHI++ADFG G + SN VGTP +++PE L+ E
Sbjct: 162 -----DIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN-TVGTPAFMAPESLS--ETR 213
Query: 204 RGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF-DLPSDVGYEISDD 262
+ G D W++GV +Y ++G+ PF E ++ + KI + F D P +I++D
Sbjct: 214 KIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP-----DIAED 268
Query: 263 AKDLMRRLI 271
KDL+ R++
Sbjct: 269 LKDLITRML 277
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 114
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 115 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 163
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 164 --RRXXLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 217 YKRISRVE--FTFPDFV----TEGARDLISRLL 243
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 114
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++A+FG +
Sbjct: 115 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIANFGWSVHAPSS- 163
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 164 --RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 217 YKRISRVE--FTFPDFV----TEGARDLISRLL 243
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 109
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 110 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH-- 157
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 158 -APSSRRXXLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 212 QETYKRI--SRVEFTFPDFV----TEGARDLISRLL 241
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 115
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 116 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAPSS- 164
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 165 --RRXXLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 218 YKRI--SRVEFTFPDFV----TEGARDLISRLL 244
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 135
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 136 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 185
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ + + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 186 ---SSRRDDLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 237
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 238 QETYKRISRVE--FTFPDFV----TEGARDLISRLL 267
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 112
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++A+FG +
Sbjct: 113 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIANFGWSVHAP 162
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 163 SS---RRTTLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 215 QETYKRI--SRVEFTFPDFV----TEGARDLISRLL 244
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 26/218 (11%)
Query: 58 AKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL-TLLSKFEDRLPEDMA 116
+KL EE VL D I L+ F+D N YLVM+ Y GG+L ++ + + E A
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDA 138
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLR 173
I +++ + +H + VHR D+KP+N+LL++ + I++ DFG
Sbjct: 139 AVIIKQVLSGVTYLHKHNIVHR----------DLKPENLLLESKEKDALIKIVDFGLSAV 188
Query: 174 LGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAE 233
++ + GT YI+PE+L R +Y +CD WS+GV ++ +L G PF +
Sbjct: 189 FENQKKMKERL--GTAYYIAPEVL------RKKYDEKCDVWSIGVILFILLAGYPPFGGQ 240
Query: 234 SLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
+ E K+ + +FD P +S+ AKDL+++++
Sbjct: 241 TDQEILRKVEKGKYTFDSPE--WKNVSEGAKDLIKQML 276
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 112
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 113 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH--APS 160
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ ++++ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 161 SRRTDLC-GTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 215 YKRI--SRVEFTFPDFV----TEGARDLISRLL 241
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 110
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 111 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH-- 158
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ ++++ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 159 APSSRRTDLC-GTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 212
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 213 QETYKRISRVE--FTFPDFV----TEGARDLISRLL 242
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 98/198 (49%), Gaps = 16/198 (8%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ ++ +LV D G+L L++ + L E + + ++ I ++H L+
Sbjct: 73 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLN 131
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + +I+L DFG +L D + GTP Y++P
Sbjct: 132 IVHR----------DLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 179
Query: 195 EIL-TAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPS 253
EI+ +M + YG E D WS GV MY +L G PF+ + IM+ F P
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 254 DVGYEISDDAKDLMRRLI 271
Y SD KDL+ R +
Sbjct: 240 WDDY--SDTVKDLVSRFL 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 112
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 113 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH--APS 160
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ ++++ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 161 SRRTDLC-GTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 215 YKRI--SRVEFTFPDFV----TEGARDLISRLL 241
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 110/242 (45%), Gaps = 32/242 (13%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ ++ +LV D G+L L++ + L E + + ++ I ++H L+
Sbjct: 86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLN 144
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + +I+L DFG +L D + GTP Y++P
Sbjct: 145 IVHR----------DLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 192
Query: 195 EIL-TAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPS 253
EI+ +M + YG E D WS GV MY +L G PF+ + IM+ F P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 254 DVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDS 313
Y SD KDL+ R + + + AL HP+FQ +
Sbjct: 253 WDDY--SDTVKDLVSRFLVVQPQK-------RYTAEEAL---------AHPFFQQYVVEE 294
Query: 314 IR 315
+R
Sbjct: 295 VR 296
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D + +YL+++Y G + L K + E
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL-SKFDEQRTAT 117
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 118 YITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH--APS 165
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ ++++ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A + ET
Sbjct: 166 SRRTDLC-GTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I + F P V ++ A+DL+ RL+
Sbjct: 220 YKRIS--RVEFTFPDFV----TEGARDLISRLL 246
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 110/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD----EQR 112
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 113 TATYITELANALSYCHSKRVIHR----------DIKPENLLLGSAGELKIADFGWSVH-- 160
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ + + GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 161 -APSSRRDDLCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 214
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
ETY +I + F P V ++ A+DL+ RL+
Sbjct: 215 QETYKRI--SRVEFTFPDFV----TEGARDLISRLL 244
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 70 GDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS 129
GD +I + YAF L ++D GGDL LS+ DM +FY AE++L +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-RFYAAEIILGLEH 307
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGT 188
+H+ V+R D+KP N+LLD +GH+R++D G L D + + +VGT
Sbjct: 308 MHNRFVVYR----------DLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGT 353
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHQN 247
Y++PE+L ++G Y DW+SLG ++++L G +PF + + M
Sbjct: 354 HGYMAPEVL---QKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409
Query: 248 SFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ +LP E+ + L++R + + RLG G ++ + P+F+
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDV---NRRLGCLGRGAQEV------------KESPFFR 454
Query: 308 GIAWDSI--RDSNAPYIPEVSSPTDTSHFDV 336
+ W + + P IP FD+
Sbjct: 455 SLDWQMVFLQKYPPPLIPPRGEVNAADAFDI 485
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 70 GDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS 129
GD +I + YAF L ++D GGDL LS+ DM +FY AE++L +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-RFYAAEIILGLEH 307
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGT 188
+H+ V+R D+KP N+LLD +GH+R++D G L D + + +VGT
Sbjct: 308 MHNRFVVYR----------DLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGT 353
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHQN 247
Y++PE+L ++G Y DW+SLG ++++L G +PF + + M
Sbjct: 354 HGYMAPEVL---QKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409
Query: 248 SFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ +LP E+ + L++R + + RLG G ++ + P+F+
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDV---NRRLGCLGRGAQEV------------KESPFFR 454
Query: 308 GIAWDSI--RDSNAPYIPEVSSPTDTSHFDV 336
+ W + + P IP FD+
Sbjct: 455 SLDWQMVFLQKYPPPLIPPRGEVNAADAFDI 485
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 70 GDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS 129
GD +I + YAF L ++D GGDL LS+ DM +FY AE++L +
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-RFYAAEIILGLEH 306
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGT 188
+H+ V+R D+KP N+LLD +GH+R++D G L D + + +VGT
Sbjct: 307 MHNRFVVYR----------DLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGT 352
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHQN 247
Y++PE+L ++G Y DW+SLG ++++L G +PF + + M
Sbjct: 353 HGYMAPEVL---QKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 408
Query: 248 SFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ +LP E+ + L++R + + RLG G ++ + P+F+
Sbjct: 409 AVELPDSFSPELRSLLEGLLQRDV---NRRLGCLGRGAQEV------------KESPFFR 453
Query: 308 GIAWDSI--RDSNAPYIPEVSSPTDTSHFDV 336
+ W + + P IP FD+
Sbjct: 454 SLDWQMVFLQKYPPPLIPPRGEVNAADAFDI 484
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 38/271 (14%)
Query: 70 GDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS 129
GD +I + YAF L ++D GGDL LS+ DM +FY AE++L +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADM-RFYAAEIILGLEH 307
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGT 188
+H+ V+R D+KP N+LLD +GH+R++D G L D + + +VGT
Sbjct: 308 MHNRFVVYR----------DLKPANILLDEHGHVRISDLG----LACDFSKKKPHASVGT 353
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHQN 247
Y++PE+L ++G Y DW+SLG ++++L G +PF + + M
Sbjct: 354 HGYMAPEVL---QKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 409
Query: 248 SFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ +LP E+ + L++R + + RLG G ++ + P+F+
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDV---NRRLGCLGRGAQEV------------KESPFFR 454
Query: 308 GIAWDSI--RDSNAPYIPEVSSPTDTSHFDV 336
+ W + + P IP FD+
Sbjct: 455 SLDWQMVFLQKYPPPLIPPRGEVNAADAFDI 485
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 31/216 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL---LTLLSKFEDRLPEDM 115
+LR E ++ + I L+ F D + +YL+++Y G + L LSKF+ E
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD----EQR 109
Query: 116 AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
YI E+ A++ H +HR DIKP+N+LL + G +++ADFG +
Sbjct: 110 TATYITELANALSYCHSKKVIHR----------DIKPENLLLGSAGELKIADFGWSVHAP 159
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ GT DY+ PE++ EGR + + D WSLGV YE L G+ PF A +
Sbjct: 160 SS---RRAALCGTLDYLPPEMI----EGR-MHDEKVDLWSLGVLCYEFLVGKPPFEANTY 211
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
+TY +I + F P V ++ A+DL+ RL+
Sbjct: 212 QDTYKRI--SRVEFTFPDFV----TEGARDLISRLL 241
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
L R+K S ++ V K+R E L I L+ S++++VM+Y GG+L
Sbjct: 49 LNRQKIRS--LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDY 106
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
+ K RL E ++ +++ + Y HR H H RD+KP+NVLLDA+ +
Sbjct: 107 ICK-NGRLDEKESRRLFQQILSGVD------YCHR--HMVVH--RDLKPENVLLDAHMNA 155
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ADFG + DG + G+P+Y +PE+++ GR GPE D WS GV +Y +
Sbjct: 156 KIADFGLS-NMMSDGEFL-RXSCGSPNYAAPEVIS----GRLYAGPEVDIWSSGVILYAL 209
Query: 224 LYGETPFYAESLVETYGKI 242
L G PF + + + KI
Sbjct: 210 LCGTLPFDDDHVPTLFKKI 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 23/223 (10%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ KL E ++ + I L + + LYLVM+Y GG++ L R+ E A
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEA 115
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+ H VHR D+K +N+LLDA+ +I++ADFG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHR----------DLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ + G+P Y +PE+ +G+ GPE D WSLGV +Y ++ G PF ++L
Sbjct: 166 GNKL--DTFCGSPPYAAPELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG 279
E +++ + + +P + +S D ++L+++ + + ++ G
Sbjct: 220 ELRERVL--RGKYRIP----FYMSTDCENLLKKFLILNPSKRG 256
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 23/223 (10%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ KL E ++ + I L + + LYLVM+Y GG++ L R+ E A
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEA 115
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+ H VHR D+K +N+LLDA+ +I++ADFG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHR----------DLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ + G+P Y +PE+ +G+ GPE D WSLGV +Y ++ G PF ++L
Sbjct: 166 GNKL--DTFCGSPPYAAPELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG 279
E +++ + + +P + +S D ++L+++ + + ++ G
Sbjct: 220 ELRERVL--RGKYRIP----FYMSTDCENLLKKFLILNPSKRG 256
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 18/199 (9%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L +++ S ++LV D G+L L++ + L E + + ++ A++ +H +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYIS 193
VHR D+KP+N+LLD N IRL+DFG SC G+ + GTP Y++
Sbjct: 221 IVHR----------DLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE---LCGTPGYLA 267
Query: 194 PEILT-AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
PEIL +M+E YG E D W+ GV ++ +L G PF+ + IM Q F P
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327
Query: 253 SDVGYEISDDAKDLMRRLI 271
+ S KDL+ RL+
Sbjct: 328 E--WDDRSSTVKDLISRLL 344
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 23/223 (10%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ KL E ++ + I L + + LYLVM+Y GG++ L R+ E A
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEA 115
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+ H VHR D+K +N+LLDA+ +I++ADFG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHR----------DLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ + G+P Y +PE+ +G+ GPE D WSLGV +Y ++ G PF ++L
Sbjct: 166 GNKL--DTFCGSPPYAAPELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG 279
E +++ + + +P + +S D ++L+++ + + ++ G
Sbjct: 220 ELRERVL--RGKYRIP----FYMSTDCENLLKKFLILNPSKRG 256
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
L R+K S ++ V K++ E L I L+ ++ ++VM+Y GG+L
Sbjct: 44 LNRQKIRS--LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
+ K R+ E A+ +++ A+ Y HR H H RD+KP+NVLLDA+ +
Sbjct: 102 ICK-HGRVEEMEARRLFQQILSAVD------YCHR--HMVVH--RDLKPENVLLDAHMNA 150
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ADFG + DG + + G+P+Y +PE+++ GR GPE D WS GV +Y +
Sbjct: 151 KIADFGLS-NMMSDGEFLRD-SCGSPNYAAPEVIS----GRLYAGPEVDIWSCGVILYAL 204
Query: 224 LYGETPFYAESLVETYGKI 242
L G PF E + + KI
Sbjct: 205 LCGTLPFDDEHVPTLFKKI 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFY 119
L +E VL D I L+ F+D N YLVM+ Y GG+L + + E A
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVI 126
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGG 176
+ +++ +H + VHR D+KP+N+LL++ I++ DFG
Sbjct: 127 MKQVLSGTTYLHKHNIVHR----------DLKPENLLLESKSRDALIKIVDFGLSAHFEV 176
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
G ++ + GT YI+PE+L R +Y +CD WS GV +Y +L G PF ++
Sbjct: 177 GGKMKERL--GTAYYIAPEVL------RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQ 228
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
E ++ + SFD P ++SD+AK L++ ++
Sbjct: 229 EILKRVEKGKFSFDPPD--WTQVSDEAKQLVKLML 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
L R+K S ++ V K++ E L I L+ ++ ++VM+Y GG+L
Sbjct: 44 LNRQKIRS--LDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI 163
+ K R+ E A+ +++ A+ Y HR H H RD+KP+NVLLDA+ +
Sbjct: 102 ICK-HGRVEEMEARRLFQQILSAVD------YCHR--HMVVH--RDLKPENVLLDAHMNA 150
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
++ADFG + DG + G+P+Y +PE+++ GR GPE D WS GV +Y +
Sbjct: 151 KIADFGLS-NMMSDGEFLRT-SCGSPNYAAPEVIS----GRLYAGPEVDIWSCGVILYAL 204
Query: 224 LYGETPFYAESLVETYGKI 242
L G PF E + + KI
Sbjct: 205 LCGTLPFDDEHVPTLFKKI 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 26/217 (11%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL-TLLSKFEDRLPEDMAKF 118
L E +L D I L+ F+D YLV + Y GG+L ++S+ R E A
Sbjct: 79 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAAR 136
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLRLG 175
I +++ I +H VHR D+KP+N+LL++ + +IR+ DFG L
Sbjct: 137 IIRQVLSGITYMHKNKIVHR----------DLKPENLLLESKSKDANIRIIDFG--LSTH 184
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
+ + + +GT YI+PE+L G Y +CD WS GV +Y +L G PF +
Sbjct: 185 FEASKKMKDKIGTAYYIAPEVL------HGTYDEKCDVWSTGVILYILLSGCPPFNGANE 238
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLIC 272
+ K+ + +F+LP ++S+ AKDL+R+++
Sbjct: 239 YDILKKVEKGKYTFELPQ--WKKVSESAKDLIRKMLT 273
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 30/229 (13%)
Query: 57 VAKLREERDVLVYGDRRW--ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPED 114
V++ ER+V + + R I LH F++ +++ L+++ GG+L L++ E L ED
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTED 115
Query: 115 MAKFYIAEMVLAIASIHDLHYVH--RPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADF 168
A ++ +++ + HY+H R HF D+KP+N+ LLD N I+L DF
Sbjct: 116 EATQFLKQILDGV------HYLHSKRIAHF------DLKPENIMLLDKNVPNPRIKLIDF 163
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
G ++ G N+ GTP++++PEI+ G E D WS+GV Y +L G +
Sbjct: 164 GIAHKIEA-GNEFKNI-FGTPEFVAPEIVNYEP-----LGLEADMWSIGVITYILLSGAS 216
Query: 229 PFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTR 277
PF E+ ET I ++D + S+ AKD +RRL+ R
Sbjct: 217 PFLGETKQETLTNI--SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKR 263
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ KL E ++ + I L + + LYLVM+Y GG++ L R+ E A
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEA 115
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+ H VHR D+K +N+LLDA+ +I++ADFG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHR----------DLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ + G P Y +PE+ +G+ GPE D WSLGV +Y ++ G PF ++L
Sbjct: 166 GNKL--DAFCGAPPYAAPELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG 279
E +++ + + +P + +S D ++L+++ + + ++ G
Sbjct: 220 ELRERVL--RGKYRIP----FYMSTDCENLLKKFLILNPSKRG 256
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 46/271 (16%)
Query: 57 VAKLREERDVLVYGDRRW--ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPED 114
V++ ER+V + + R I LH F++ +++ L+++ GG+L L++ E L ED
Sbjct: 50 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTED 108
Query: 115 MAKFYIAEMVLAIASIHDLHYVH--RPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADF 168
A ++ +++ + HY+H R HF D+KP+N+ LLD N I+L DF
Sbjct: 109 EATQFLKQILDGV------HYLHSKRIAHF------DLKPENIMLLDKNVPNPRIKLIDF 156
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
G ++ G N+ GTP++++PEI+ G E D WS+GV Y +L G +
Sbjct: 157 GIAHKIEA-GNEFKNI-FGTPEFVAPEIVNYEP-----LGLEADMWSIGVITYILLSGAS 209
Query: 229 PFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKM 288
PF E+ ET I ++D + S+ AKD +RRL+ + D K
Sbjct: 210 PFLGETKQETLTNI--SAVNYDFDEEYFSNTSELAKDFIRRLL-----------VKDPKR 256
Query: 289 WSALFVSLSISPRNHPWFQGIAWDSIRDSNA 319
+ SL H W + I ++R ++
Sbjct: 257 RMTIAQSLE-----HSWIKAIRRRNVRGEDS 282
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 46/271 (16%)
Query: 57 VAKLREERDVLVYGDRRW--ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPED 114
V++ ER+V + + R I LH F++ +++ L+++ GG+L L++ E L ED
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-LTED 129
Query: 115 MAKFYIAEMVLAIASIHDLHYVH--RPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADF 168
A ++ +++ + HY+H R HF D+KP+N+ LLD N I+L DF
Sbjct: 130 EATQFLKQILDGV------HYLHSKRIAHF------DLKPENIMLLDKNVPNPRIKLIDF 177
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
G ++ G N+ GTP++++PEI+ G E D WS+GV Y +L G +
Sbjct: 178 GIAHKIEA-GNEFKNI-FGTPEFVAPEIVNYEP-----LGLEADMWSIGVITYILLSGAS 230
Query: 229 PFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKM 288
PF E+ ET I ++D + S+ AKD +RRL+ R
Sbjct: 231 PFLGETKQETLTNI--SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKR----------- 277
Query: 289 WSALFVSLSISPRNHPWFQGIAWDSIRDSNA 319
+ ++ S+ H W + I ++R ++
Sbjct: 278 --RMXIAQSLE---HSWIKAIRRRNVRGEDS 303
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I LH F D + +LVM+ GG+L + K + E A + + ++V A++ +HD+
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKK-KKHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 135 YVHRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDY 191
VHR D+KP+N+L + N I++ DFG RL T Y
Sbjct: 127 VVHR----------DLKPENLLFTDENDNLEIKIIDFGFA-RLKPPDNQPLKTPCFTLHY 175
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAE-------SLVETYGKIMN 244
+PE+L + Y CD WSLGV +Y ML G+ PF + S VE KI
Sbjct: 176 AAPELLN-----QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-- 228
Query: 245 HQNSFDLPSDVGYEISDDAKDLMRRLI-CSSDTRLGQNGIADFKMWSALFVSLSISPRNH 303
+ F + +S +AKDL++ L+ + RL +G+ + W LS +P
Sbjct: 229 KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR-YNEWLQDGSQLSSNPLMT 287
Query: 304 P 304
P
Sbjct: 288 P 288
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ KL E ++ + I L + + LYLVM+Y GG++ L R+ E A
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEA 115
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+ H VHR D+K +N+LLDA+ +I++ADFG
Sbjct: 116 RAKFRQIVSAVQYCHQKFIVHR----------DLKAENLLLDADMNIKIADFGFSNEFTF 165
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ G+P Y +PE+ +G+ GPE D WSLGV +Y ++ G PF ++L
Sbjct: 166 GNKLDE--FCGSPPYAAPELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 219
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG 279
E +++ + + +P + +S D ++L+++ + + ++ G
Sbjct: 220 ELRERVL--RGKYRIP----FYMSTDCENLLKKFLILNPSKRG 256
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFY 119
L +E VL D I L+ F+D N YLVM+ Y GG+L + + E A
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVI 109
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGG 176
+ +++ +H + VHR D+KP+N+LL++ I++ DFG
Sbjct: 110 MKQVLSGTTYLHKHNIVHR----------DLKPENLLLESKSRDALIKIVDFGLSAHFEV 159
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
G ++ + GT YI+PE+L R +Y +CD WS GV +Y +L G PF ++
Sbjct: 160 GGKMKERL--GTAYYIAPEVL------RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQ 211
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
E ++ + SFD P ++SD+AK L++ ++
Sbjct: 212 EILKRVEKGKFSFDPPD--WTQVSDEAKQLVKLML 244
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL-TLLSKFEDRLPEDMAKF 118
L E +L D I L+ F+D YLV + Y GG+L ++S+ R E A
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAAR 130
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLRLG 175
I +++ I +H VHR D+KP+N+LL++ + +IR+ DFG
Sbjct: 131 IIRQVLSGITYMHKNKIVHR----------DLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
++ + GT YI+PE+L G Y +CD WS GV +Y +L G PF +
Sbjct: 181 ASKKMKDKI--GTAYYIAPEVL------HGTYDEKCDVWSTGVILYILLSGCPPFNGANE 232
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLIC 272
+ K+ + +F+LP ++S+ AKDL+R+++
Sbjct: 233 YDILKKVEKGKYTFELPQ--WKKVSESAKDLIRKMLT 267
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 42/247 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ +LYL+M GG+L + + D ++ I +++ A+ +HDL
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLG 136
Query: 135 YVHRPNHFAFHLCRDIKPDNVL---LDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDY 191
VHR D+KP+N+L LD + I ++DFG ++ G+V S A GTP Y
Sbjct: 137 IVHR----------DLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLST-ACGTPGY 184
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDL 251
++PE+L + Y D WS+GV Y +L G PFY E+ + + +I+ + FD
Sbjct: 185 VAPEVL-----AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 252 PSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAW 311
P +ISD AKD +R L+ + F AL HPW IA
Sbjct: 240 P--YWDDISDSAKDFIRHLMEKDPEK-------RFTCEQAL---------QHPW---IAG 278
Query: 312 DSIRDSN 318
D+ D N
Sbjct: 279 DTALDKN 285
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 42/247 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ +LYL+M GG+L + + D ++ I +++ A+ +HDL
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLG 136
Query: 135 YVHRPNHFAFHLCRDIKPDNVL---LDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDY 191
VHR D+KP+N+L LD + I ++DFG ++ G+V S A GTP Y
Sbjct: 137 IVHR----------DLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLST-ACGTPGY 184
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDL 251
++PE+L + Y D WS+GV Y +L G PFY E+ + + +I+ + FD
Sbjct: 185 VAPEVL-----AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 252 PSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAW 311
P +ISD AKD +R L+ + F AL HPW IA
Sbjct: 240 P--YWDDISDSAKDFIRHLMEKDPEKR-------FTCEQAL---------QHPW---IAG 278
Query: 312 DSIRDSN 318
D+ D N
Sbjct: 279 DTALDKN 285
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 42/247 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ +LYL+M GG+L + + D ++ I +++ A+ +HDL
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLG 136
Query: 135 YVHRPNHFAFHLCRDIKPDNVL---LDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDY 191
VHR D+KP+N+L LD + I ++DFG ++ G+V S A GTP Y
Sbjct: 137 IVHR----------DLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLST-ACGTPGY 184
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDL 251
++PE+L + Y D WS+GV Y +L G PFY E+ + + +I+ + FD
Sbjct: 185 VAPEVL-----AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 252 PSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAW 311
P +ISD AKD +R L+ + F AL HPW IA
Sbjct: 240 P--YWDDISDSAKDFIRHLMEKDPEK-------RFTCEQAL---------QHPW---IAG 278
Query: 312 DSIRDSN 318
D+ D N
Sbjct: 279 DTALDKN 285
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL-TLLSKFEDRLPEDMAKF 118
L E +L D I L+ F+D YLV + Y GG+L ++S+ R E A
Sbjct: 96 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAAR 153
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLRLG 175
I +++ I +H VHR D+KP+N+LL++ + +IR+ DFG
Sbjct: 154 IIRQVLSGITYMHKNKIVHR----------DLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
++ + GT YI+PE+L G Y +CD WS GV +Y +L G PF +
Sbjct: 204 ASKKMKDKI--GTAYYIAPEVL------HGTYDEKCDVWSTGVILYILLSGCPPFNGANE 255
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLIC 272
+ K+ + +F+LP ++S+ AKDL+R+++
Sbjct: 256 YDILKKVEKGKYTFELPQ--WKKVSESAKDLIRKMLT 290
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL-TLLSKFEDRLPEDMAKF 118
L E +L D I L+ F+D YLV + Y GG+L ++S+ R E A
Sbjct: 97 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAAR 154
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLRLG 175
I +++ I +H VHR D+KP+N+LL++ + +IR+ DFG
Sbjct: 155 IIRQVLSGITYMHKNKIVHR----------DLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
++ + GT YI+PE+L G Y +CD WS GV +Y +L G PF +
Sbjct: 205 ASKKMKDKI--GTAYYIAPEVL------HGTYDEKCDVWSTGVILYILLSGCPPFNGANE 256
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLIC 272
+ K+ + +F+LP ++S+ AKDL+R+++
Sbjct: 257 YDILKKVEKGKYTFELPQ--WKKVSESAKDLIRKMLT 291
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 42/247 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L ++ +LYL+M GG+L + + D ++ I +++ A+ +HDL
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQVLDAVKYLHDLG 136
Query: 135 YVHRPNHFAFHLCRDIKPDNVL---LDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDY 191
VHR D+KP+N+L LD + I ++DFG ++ G+V S A GTP Y
Sbjct: 137 IVHR----------DLKPENLLYYSLDEDSKIMISDFGLS-KMEDPGSVLST-ACGTPGY 184
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDL 251
++PE+L + Y D WS+GV Y +L G PFY E+ + + +I+ + FD
Sbjct: 185 VAPEVL-----AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 252 PSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAW 311
P +ISD AKD +R L+ + F AL HPW IA
Sbjct: 240 P--YWDDISDSAKDFIRHLMEKDPEKR-------FTCEQAL---------QHPW---IAG 278
Query: 312 DSIRDSN 318
D+ D N
Sbjct: 279 DTALDKN 285
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
+ + H F+D+ +++V++ C L L K L E A++Y+ ++VL +H
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 159
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
+HR D+K N+ L+ + +++ DFG ++ DG + V GTP+YI
Sbjct: 160 NRVIHR----------DLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYI 208
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+L+ + + E D WS+G MY +L G+ PF L ETY +I +N + +P
Sbjct: 209 APEVLS-----KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIP 261
Query: 253 SDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVS--LSISPRNHPWFQGI 309
I+ A L+++++ + T R N + + + +++ ++ L I+ P I
Sbjct: 262 K----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSI 317
Query: 310 AWDSIRDSN 318
A S+ SN
Sbjct: 318 APSSLDPSN 326
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
+ + H F+D+ +++V++ C L L K L E A++Y+ ++VL +H
Sbjct: 99 QHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 157
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
+HR D+K N+ L+ + +++ DFG ++ DG + V GTP+YI
Sbjct: 158 NRVIHR----------DLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYI 206
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+L+ + + E D WS+G MY +L G+ PF L ETY +I +N + +P
Sbjct: 207 APEVLS-----KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIP 259
Query: 253 SDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVS--LSISPRNHPWFQGI 309
I+ A L+++++ + T R N + + + +++ ++ L I+ P I
Sbjct: 260 K----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSI 315
Query: 310 AWDSIRDSN 318
A S+ SN
Sbjct: 316 APSSLDPSN 324
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 33/229 (14%)
Query: 46 REKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLS 105
+E ++ + I + K++ E I L ++ ++LYLVM GG+L +
Sbjct: 63 KESSIENEIAVLRKIKHEN----------IVALEDIYESPNHLYLVMQLVSGGELFDRIV 112
Query: 106 KFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL---DANGH 162
+ + E A I +++ A+ +H + VHR D+KP+N+L D
Sbjct: 113 E-KGFYTEKDASTLIRQVLDAVYYLHRMGIVHR----------DLKPENLLYYSQDEESK 161
Query: 163 IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
I ++DFG ++ G G V S A GTP Y++PE+L + Y D WS+GV Y
Sbjct: 162 IMISDFG-LSKMEGKGDVMS-TACGTPGYVAPEVL-----AQKPYSKAVDCWSIGVIAYI 214
Query: 223 MLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
+L G PFY E+ + + +I+ + FD P +ISD AKD +R L+
Sbjct: 215 LLCGYPPFYDENDSKLFEQILKAEYEFDSP--YWDDISDSAKDFIRNLM 261
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 31/210 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I LH +++ +++ L+++ GG+L L++ E L E+ A +I +++ + +H
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH--- 132
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
+ HF D+KP+N+ LLD N HI+L DFG + DG N+ GTP+
Sbjct: 133 -TKKIAHF------DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI-FGTPE 183
Query: 191 YISPEILTAMEEGRGRYGP---ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQN 247
+++PEI+ Y P E D WS+GV Y +L G +PF ++ ET I
Sbjct: 184 FVAPEIVN--------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--AV 233
Query: 248 SFDLPSDVGYEISDDAKDLMRRLICSSDTR 277
S+D + + S+ AKD +R+L+ +TR
Sbjct: 234 SYDFDEEFFSQTSELAKDFIRKLLV-KETR 262
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 31/237 (13%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
+ + H F+D+ +++V++ C L L K L E A++Y+ ++VL +H
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 133
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
+HR D+K N+ L+ + +++ DFG ++ DG + V GTP+YI
Sbjct: 134 NRVIHR----------DLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYI 182
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+L+ + + E D WS+G MY +L G+ PF L ETY +I +N + +P
Sbjct: 183 APEVLS-----KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIP 235
Query: 253 SDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVS-------LSISPR 301
I+ A L+++++ + T R N + + + +++ ++ L+I PR
Sbjct: 236 K----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPR 288
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 25/207 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A +I +++ + +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH--- 132
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
+ HF D+KP+N+ LLD N HI+L DFG + DG N+ GTP+
Sbjct: 133 -TKKIAHF------DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI-FGTPE 183
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET I S+D
Sbjct: 184 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--AVSYD 236
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDTR 277
+ + S+ AKD +R+L+ +TR
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLV-KETR 262
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 25/207 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A +I +++ + +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH--- 132
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
+ HF D+KP+N+ LLD N HI+L DFG + DG N+ GTP+
Sbjct: 133 -TKKIAHF------DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI-FGTPE 183
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET I S+D
Sbjct: 184 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT--AVSYD 236
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDTR 277
+ + S+ AKD +R+L+ +TR
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLV-KETR 262
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 22/207 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ NLH AF+DD+ + ++ ++ GG+L ++ +++ ED A Y+ ++ + +H+ +
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDA--NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
YVH D+KP+N++ + ++L DFG L +V+ V GT ++
Sbjct: 170 YVH----------LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFA 217
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+ EG+ G D WS+GV Y +L G +PF E+ ET + + + D
Sbjct: 218 APEVA----EGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 272
Query: 253 SDVGYEISDDAKDLMRRLICS-SDTRL 278
+ G IS+D KD +R+L+ + +TR+
Sbjct: 273 AFSG--ISEDGKDFIRKLLLADPNTRM 297
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
+ + H F+D+ +++V++ C L L K L E A++Y+ ++VL +H
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
+HR D+K N+ L+ + +++ DFG ++ DG + + GTP+YI
Sbjct: 136 NRVIHR----------DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYI 184
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+L+ + + E D WS+G MY +L G+ PF L ETY +I +N + +P
Sbjct: 185 APEVLS-----KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIP 237
Query: 253 SDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVS--LSISPRNHPWFQGI 309
I+ A L+++++ + T R N + + + +++ ++ L I+ P I
Sbjct: 238 K----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPXFSI 293
Query: 310 AWDSIRDSN 318
A S+ SN
Sbjct: 294 APSSLDPSN 302
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 26/202 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLL-TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
I L+ F+D YLV + Y GG+L ++S+ R E A I +++ I H
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYXHKN 145
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
VHR D+KP+N+LL++ + +IR+ DFG L + + + +GT
Sbjct: 146 KIVHR----------DLKPENLLLESKSKDANIRIIDFG--LSTHFEASKKXKDKIGTAY 193
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
YI+PE+L G Y +CD WS GV +Y +L G PF + + K+ + +F+
Sbjct: 194 YIAPEVL------HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 251 LPSDVGYEISDDAKDLMRRLIC 272
LP ++S+ AKDL+R+ +
Sbjct: 248 LPQ--WKKVSESAKDLIRKXLT 267
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 22/207 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ NLH AF+DD+ + ++ ++ GG+L ++ +++ ED A Y+ ++ + +H+ +
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDA--NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
YVH D+KP+N++ + ++L DFG L +V+ V GT ++
Sbjct: 276 YVH----------LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK--VTTGTAEFA 323
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+ EG+ G D WS+GV Y +L G +PF E+ ET + + + D
Sbjct: 324 APEVA----EGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS 378
Query: 253 SDVGYEISDDAKDLMRRLICS-SDTRL 278
+ G IS+D KD +R+L+ + +TR+
Sbjct: 379 AFSG--ISEDGKDFIRKLLLADPNTRM 403
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 25/207 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A +I +++ + +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH--- 132
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
+ HF D+KP+N+ LLD N HI+L DFG + DG N+ GTP+
Sbjct: 133 -TKKIAHF------DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI-FGTPE 183
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET I + S+D
Sbjct: 184 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS--VSYD 236
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDTR 277
+ S+ AKD +R+L+ +TR
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLV-KETR 262
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 25/207 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A +I +++ + +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH--- 132
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
+ HF D+KP+N+ LLD N HI+L DFG + DG N+ GTP+
Sbjct: 133 -TKKIAHF------DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI-FGTPE 183
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET I + S+D
Sbjct: 184 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS--VSYD 236
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDTR 277
+ S+ AKD +R+L+ +TR
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLV-KETR 262
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 25/207 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A +I +++ + +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH--- 132
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
+ HF D+KP+N+ LLD N HI+L DFG + DG N+ GTP+
Sbjct: 133 -TKKIAHF------DLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNI-FGTPE 183
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET I + S+D
Sbjct: 184 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS--VSYD 236
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDTR 277
+ S+ AKD +R+L+ +TR
Sbjct: 237 FDEEFFSHTSELAKDFIRKLLV-KETR 262
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
+ + H F+D+ +++V++ C L L K L E A++Y+ ++VL +H
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 135
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
+HR D+K N+ L+ + +++ DFG ++ DG + + GTP+YI
Sbjct: 136 NRVIHR----------DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYI 184
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+L+ + + E D WS+G MY +L G+ PF L ETY +I +N + +P
Sbjct: 185 APEVLS-----KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIP 237
Query: 253 SDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVS--LSISPRNHPWFQGI 309
I+ A L+++++ + T R N + + + +++ ++ L I+ P I
Sbjct: 238 K----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSI 293
Query: 310 AWDSIRDSN 318
A S+ SN
Sbjct: 294 APSSLDPSN 302
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L++VM+Y GG L +++ E + E E + A+ +H +HR
Sbjct: 92 LWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHR--------- 140
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
DIK DN+LL +G ++L DFG C ++ + + +S + VGTP +++PE++T R Y
Sbjct: 141 -DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-----RKAY 193
Query: 208 GPECDWWSLGVCMYEMLYGETPFYAES 234
GP+ D WSLG+ EM+ GE P+ E+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 123/249 (49%), Gaps = 26/249 (10%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
+ + H F+D+ +++V++ C L L K L E A++Y+ ++VL +H
Sbjct: 81 QHVVGFHGFFEDNDFVFVVLEL-CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR 139
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
+HR D+K N+ L+ + +++ DFG ++ DG + + GTP+YI
Sbjct: 140 NRVIHR----------DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYI 188
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PE+L+ + + E D WS+G MY +L G+ PF L ETY +I +N + +P
Sbjct: 189 APEVLS-----KKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI--KKNEYSIP 241
Query: 253 SDVGYEISDDAKDLMRRLICSSDT-RLGQNGIADFKMWSALFVS--LSISPRNHPWFQGI 309
I+ A L+++++ + T R N + + + +++ ++ L I+ P I
Sbjct: 242 K----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSI 297
Query: 310 AWDSIRDSN 318
A S+ SN
Sbjct: 298 APSSLDPSN 306
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L++VM+Y GG L +++ E + E E + A+ +H +HR
Sbjct: 92 LWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHR--------- 140
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
DIK DN+LL +G ++L DFG C ++ + + +S + VGTP +++PE++T R Y
Sbjct: 141 -DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVT-----RKAY 193
Query: 208 GPECDWWSLGVCMYEMLYGETPFYAES 234
GP+ D WSLG+ EM+ GE P+ E+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 137
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 138 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 189
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 190 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 247 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 279
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L++VM+Y GG L +++ E + E E + A+ +H +HR
Sbjct: 93 LWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHR--------- 141
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
DIK DN+LL +G ++L DFG C ++ + + +S + VGTP +++PE++T R Y
Sbjct: 142 -DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVT-----RKAY 194
Query: 208 GPECDWWSLGVCMYEMLYGETPFYAES 234
GP+ D WSLG+ EM+ GE P+ E+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L++VM+Y GG L +++ E + E E + A+ +H +HR
Sbjct: 92 LWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHR--------- 140
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
DIK DN+LL +G ++L DFG C ++ + + +S + VGTP +++PE++T R Y
Sbjct: 141 -DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVT-----RKAY 193
Query: 208 GPECDWWSLGVCMYEMLYGETPFYAES 234
GP+ D WSLG+ EM+ GE P+ E+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 137
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 138 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 189
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 190 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 247 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 82 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 136
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 137 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 188
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 189 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 245
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 246 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 83 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 137
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 138 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 189
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 190 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 246
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 247 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 279
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
+ ++ LY+VM+Y GGDL ++++K +F + M ++ + H H
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
H RD+KP NV LD +++L DFG L D T + VGTP Y+SPE + M
Sbjct: 137 VLH--RDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKTFVGTPYYMSPEQMNRMS- 192
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
Y + D WSLG +YE+ PF A S E GKI + F + Y SD+
Sbjct: 193 ----YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKF---RRIPYRYSDE 243
Query: 263 AKDLMRRLICSSD 275
+++ R++ D
Sbjct: 244 LNEIITRMLNLKD 256
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 89 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 143
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 144 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 195
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 196 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 252
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 253 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 285
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 13/193 (6%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
+ ++ LY+VM+Y GGDL ++++K +F + M ++ + H H
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
H RD+KP NV LD +++L DFG L D T + VGTP Y+SPE + M
Sbjct: 137 VLH--RDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMS- 192
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
Y + D WSLG +YE+ PF A S E GKI + F + Y SD+
Sbjct: 193 ----YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKF---RRIPYRYSDE 243
Query: 263 AKDLMRRLICSSD 275
+++ R++ D
Sbjct: 244 LNEIITRMLNLKD 256
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 108/239 (45%), Gaps = 41/239 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR---LPEDMAKFYIAEMVLAIASIH 131
I L + D LY+V ++ G DL + K D E +A Y+ +++ A+ H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 132 DLHYVHRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLGGDGTVQSNVAVGT 188
D + +HR D+KP+NVLL + + ++L DFG ++LG G V VGT
Sbjct: 148 DNNIIHR----------DVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG-RVGT 196
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNS 248
P +++PE++ R YG D W GV ++ +L G PFY G I +
Sbjct: 197 PHFMAPEVVK-----REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII---KGK 248
Query: 249 FDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ + IS+ AKDL+RR+ L + ++ AL NHPW +
Sbjct: 249 YKMNPRQWSHISESAKDLVRRM-------LMLDPAERITVYEAL---------NHPWLK 291
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 222 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 276
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 277 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 328
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 329 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 385
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 386 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 418
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 34/265 (12%)
Query: 11 FLGGPIQGKG------RVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREER 64
F G + GKG R SI T L++ + + D+ + V + ++ +L+
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 65 DVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMV 124
I L+ F+D + +YLV++ G++ L E+ A+ ++ +++
Sbjct: 73 ----------ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 125 LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV 184
+ +H +HR D+ N+LL N +I++ADFG +L +
Sbjct: 123 TGMLYLHSHGILHR----------DLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL 172
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
GTP+YISPEI T R +G E D WSLG Y +L G PF +++ T K++
Sbjct: 173 C-GTPNYISPEIAT-----RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV- 225
Query: 245 HQNSFDLPSDVGYEISDDAKDLMRR 269
+++PS + E D L+RR
Sbjct: 226 -LADYEMPSFLSIEAKDLIHQLLRR 249
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F D + Y+V++ GG+L + RL E K Y +M+LA+ +H+ +H
Sbjct: 208 FFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH---- 262
Query: 142 FAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILT 198
RD+KP+NVLL + I++ DFG LG +++ GTP Y++PE+L
Sbjct: 263 ------RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLV 314
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYE 258
++ G Y D WSLGV ++ L G PF +E + K ++ +V E
Sbjct: 315 SV--GTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKYNFIPEVWAE 371
Query: 259 ISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+S+ A DL+++L+ A F AL HPW Q
Sbjct: 372 VSEKALDLVKKLLVVDPK-------ARFTTEEAL---------RHPWLQ 404
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + H F+DD +Y+V++ C L L K + E A++++ + + + +
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEI-CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H+ +HR D+K N+ L+ + +++ DFG ++ DG + ++ GTP+
Sbjct: 143 HNNRVIHR----------DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-GTPN 191
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
YI+PE+L + + E D WSLG +Y +L G+ PF L ETY +I +N +
Sbjct: 192 YIAPEVLC-----KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI--KKNEYS 244
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDT 276
+P I+ A L+RR++ + T
Sbjct: 245 VPR----HINPVASALIRRMLHADPT 266
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 92/168 (54%), Gaps = 18/168 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L+++M++ GG L ++S+ RL E+ ++ A+A +H
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQG 161
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ D + VGTP +++P
Sbjct: 162 VIHR----------DIKSDSILLTLDGRVKLSDFGFCAQISKD-VPKRKXLVGTPYWMAP 210
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
E+++ R Y E D WSLG+ + EM+ GE P++++S V+ ++
Sbjct: 211 EVIS-----RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL 253
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 21/171 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L + + LYLVM+Y GG++ L R+ E A+ ++V A+ H +
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAV--GTPDYI 192
VHR D+K +N+LLD + +I++ADFG + TV + + G+P Y
Sbjct: 135 IVHR----------DLKAENLLLDGDMNIKIADFG----FSNEFTVGNKLDTFCGSPPYA 180
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+PE+ +G+ GPE D WSLGV +Y ++ G PF ++L E +++
Sbjct: 181 APELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 110/223 (49%), Gaps = 23/223 (10%)
Query: 57 VAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMA 116
+ KL E ++ + I L + + LYLVM+Y GG++ L + E A
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA-HGWMKEKEA 108
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGG 176
+ ++V A+ H VHR D+K +N+LLDA+ +I++ADFG
Sbjct: 109 RAKFRQIVSAVQYCHQKFIVHR----------DLKAENLLLDADMNIKIADFGFSNEFTF 158
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
+ + G+P Y +PE+ +G+ GPE D WSLGV +Y ++ G PF ++L
Sbjct: 159 GNKL--DTFCGSPPYAAPELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK 212
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLG 279
E +++ + + +P + +S D ++L+++ + + ++ G
Sbjct: 213 ELRERVL--RGKYRIP----FYMSTDCENLLKKFLILNPSKRG 249
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + ++ + YL+ D GG+L FED + + A I +++ A+
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGEL------FEDIVAREYYSEADASHCIQQILEAVLH 136
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN---GHIRLADFGSCLRLGGDGTVQSNVAV 186
H + VHR D+KP+N+LL + ++LADFG + + G+ A
Sbjct: 137 CHQMGVVHR----------DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA- 185
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 186 GTPGYLSPEVLR-----KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI--KA 238
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLICSSDTR 277
++D PS ++ +AKDL+ +++ + ++
Sbjct: 239 GAYDFPSPEWDTVTPEAKDLINKMLTINPSK 269
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + H F+DD +Y+V++ C L L K + E A++++ + + + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEI-CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H+ +HR D+K N+ L+ + +++ DFG ++ DG + ++ GTP+
Sbjct: 159 HNNRVIHR----------DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-GTPN 207
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
YI+PE+L + + E D WSLG +Y +L G+ PF L ETY +I +N +
Sbjct: 208 YIAPEVLC-----KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI--KKNEYS 260
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDT 276
+P I+ A L+RR++ + T
Sbjct: 261 VPR----HINPVASALIRRMLHADPT 282
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + H F+DD +Y+V++ C L L K + E A++++ + + + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEI-CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H+ +HR D+K N+ L+ + +++ DFG ++ DG + + GTP+
Sbjct: 159 HNNRVIHR----------DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC-GTPN 207
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
YI+PE+L + + E D WSLG +Y +L G+ PF L ETY +I +N +
Sbjct: 208 YIAPEVLC-----KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI--KKNEYS 260
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDT 276
+P I+ A L+RR++ + T
Sbjct: 261 VPR----HINPVASALIRRMLHADPT 282
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 18/147 (12%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L++VM+Y GG L +++ E + E E + A+ +H +HR
Sbjct: 93 LWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHR--------- 141
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
+IK DN+LL +G ++L DFG C ++ + + +S + VGTP +++PE++T R Y
Sbjct: 142 -NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVT-----RKAY 194
Query: 208 GPECDWWSLGVCMYEMLYGETPFYAES 234
GP+ D WSLG+ EM+ GE P+ E+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L + + LYLV +Y GG++ L R E A+ ++V A+ H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVA-HGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+K +N+LLDA+ +I++ADFG + + G P Y +P
Sbjct: 134 IVHR----------DLKAENLLLDADXNIKIADFGFSNEFTFGNKL--DAFCGAPPYAAP 181
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+ +G+ GPE D WSLGV +Y ++ G PF ++L E +++ + + +P
Sbjct: 182 ELF----QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL--RGKYRIP-- 233
Query: 255 VGYEISDDAKDLMRRLICSSDTRLG 279
+ S D ++L+++ + + ++ G
Sbjct: 234 --FYXSTDCENLLKKFLILNPSKRG 256
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI 130
D + H F+DD +Y+V++ C L L K + E A++++ + + + +
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEI-CRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H+ +HR D+K N+ L+ + +++ DFG ++ DG + + GTP+
Sbjct: 159 HNNRVIHR----------DLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC-GTPN 207
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
YI+PE+L + + E D WSLG +Y +L G+ PF L ETY +I +N +
Sbjct: 208 YIAPEVLC-----KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI--KKNEYS 260
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDT 276
+P I+ A L+RR++ + T
Sbjct: 261 VPR----HINPVASALIRRMLHADPT 282
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
++D YLVM+Y G L + L D A + +++ I HD+ VHR
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDMRIVHR---- 135
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
DIKP N+L+D+N +++ DFG L Q+N +GT Y SP E+
Sbjct: 136 ------DIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP------EQ 183
Query: 203 GRGRYGPEC-DWWSLGVCMYEMLYGETPFYAESLV 236
+G EC D +S+G+ +YEML GE PF E+ V
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + ++ + YL+ D GG+L FED + + A I +++ A+
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGEL------FEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN---GHIRLADFGSCLRLGGDGTVQSNVAV 186
H + VHR ++KP+N+LL + ++LADFG + + G+ A
Sbjct: 126 CHQMGVVHR----------NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA- 174
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 175 GTPGYLSPEVLR-----KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK--A 227
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLICSSDTR 277
++D PS ++ +AKDL+ +++ + ++
Sbjct: 228 GAYDFPSPEWDTVTPEAKDLINKMLTINPSK 258
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 32/221 (14%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM--- 115
KL E + I LH + ++ YLV D GG+L FED + +
Sbjct: 49 KLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL------FEDIVAREYYSE 102
Query: 116 --AKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN---GHIRLADFGS 170
A I +++ A+ H + VHR D+KP+N+LL + ++LADFG
Sbjct: 103 ADASHCIQQILEAVLHCHQMGVVHR----------DLKPENLLLASKCKGAAVKLADFGL 152
Query: 171 CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+ + GD A GTP Y+SPE+L + YG D W+ GV +Y +L G PF
Sbjct: 153 AIEVQGDQQAWFGFA-GTPGYLSPEVLR-----KEAYGKPVDIWACGVILYILLVGYPPF 206
Query: 231 YAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
+ E + Y +I ++D PS ++ +AK+L+ +++
Sbjct: 207 WDEDQHKLYQQIK--AGAYDFPSPEWDTVTPEAKNLINQML 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 13/193 (6%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
+ ++ LY+VM+Y GGDL ++++K +F + M ++ + H H
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
H RD+KP NV LD +++L DFG L D VGTP Y+SPE + M
Sbjct: 137 VLH--RDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-VGTPYYMSPEQMNRMS- 192
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
Y + D WSLG +YE+ PF A S E GKI + F + Y SD+
Sbjct: 193 ----YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKF---RRIPYRYSDE 243
Query: 263 AKDLMRRLICSSD 275
+++ R++ D
Sbjct: 244 LNEIITRMLNLKD 256
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 24/199 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ +++ +V++Y GG+L + + + R+ ED + + +++ AI H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD N ++++ADFG + DG + G+P+Y +P
Sbjct: 129 IVHR----------DLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAP 176
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E++ G+ GPE D WS G+ +Y ML G PF E + + K+ + + +P
Sbjct: 177 EVIN----GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV--NSCVYVMPDF 230
Query: 255 VGYEISDDAKDLMRRLICS 273
+S A+ L+RR+I +
Sbjct: 231 ----LSPGAQSLIRRMIVA 245
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 61 REERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYI 120
++E VL D ++T + ++ D+ L+++M+Y GG L LL P + + I
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQI 126
Query: 121 AEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV 180
A ++ I + L Y+H + RDIK NVLL +G ++LADFG +L D +
Sbjct: 127 ATILREI--LKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQI 179
Query: 181 QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+ N VGTP +++PE++ + Y + D WSLG+ E+ GE P
Sbjct: 180 KRNTFVGTPFWMAPEVIK-----QSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 18/169 (10%)
Query: 61 REERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYI 120
++E VL D ++T + ++ S L+++M+Y GG L LL P D +F I
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG----PFD--EFQI 122
Query: 121 AEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV 180
A M+ I + L Y+H + RDIK NVLL G ++LADFG +L D +
Sbjct: 123 ATMLKEI--LKGLDYLHSEKK----IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQI 175
Query: 181 QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+ N VGTP +++PE++ + Y + D WSLG+ E+ GE P
Sbjct: 176 KRNTFVGTPFWMAPEVIQ-----QSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 61 REERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYI 120
++E VL D ++T + ++ D+ L+++M+Y GG L LL P + + I
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQI 106
Query: 121 AEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV 180
A ++ I + L Y+H + RDIK NVLL +G ++LADFG +L D +
Sbjct: 107 ATILREI--LKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQI 159
Query: 181 QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+ N VGTP +++PE++ + Y + D WSLG+ E+ GE P
Sbjct: 160 KRNTFVGTPFWMAPEVIK-----QSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ + + VGTP +++P
Sbjct: 268 VIHR----------DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAP 316
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ + YGPE D WSLG+ + EM+ GE P++ E ++ I + +LP
Sbjct: 317 ELISRLP-----YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-----NLPPR 366
Query: 255 VG--YEISDDAKDLMRRLIC 272
+ +++S K + RL+
Sbjct: 367 LKNLHKVSPSLKGFLDRLLV 386
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 61 REERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYI 120
++E VL D ++T + ++ D+ L+++M+Y GG L LL P + + I
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQI 106
Query: 121 AEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV 180
A ++ I + L Y+H + RDIK NVLL +G ++LADFG +L D +
Sbjct: 107 ATILREI--LKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQI 159
Query: 181 QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+ N VGTP +++PE++ + Y + D WSLG+ E+ GE P
Sbjct: 160 KRNXFVGTPFWMAPEVIK-----QSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 61 REERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYI 120
++E VL D ++T + ++ D+ L+++M+Y GG L LL P + + I
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQI 121
Query: 121 AEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV 180
A ++ I + L Y+H + RDIK NVLL +G ++LADFG +L D +
Sbjct: 122 ATILREI--LKGLDYLHSEKK----IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQI 174
Query: 181 QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+ N VGTP +++PE++ + Y + D WSLG+ E+ GE P
Sbjct: 175 KRNXFVGTPFWMAPEVIK-----QSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 18/168 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ +++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQG 161
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL ++G I+L+DFG C ++ + + VGTP +++P
Sbjct: 162 VIHR----------DIKSDSILLTSDGRIKLSDFGFCAQVSKE-VPKRKXLVGTPYWMAP 210
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
E+++ R YG E D WSLG+ + EM+ GE P++ E ++ +I
Sbjct: 211 EVIS-----RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI 253
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ + + VGTP +++P
Sbjct: 191 VIHR----------DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAP 239
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ + YGPE D WSLG+ + EM+ GE P++ E ++ I + +LP
Sbjct: 240 ELISRLP-----YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-----NLPPR 289
Query: 255 VG--YEISDDAKDLMRRLIC 272
+ +++S K + RL+
Sbjct: 290 LKNLHKVSPSLKGFLDRLLV 309
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ + + VGTP +++P
Sbjct: 146 VIHR----------DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAP 194
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ R YGPE D WSLG+ + EM+ GE P++ E ++ I + +LP
Sbjct: 195 ELIS-----RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-----NLPPR 244
Query: 255 VG--YEISDDAKDLMRRLIC 272
+ +++S K + RL+
Sbjct: 245 LKNLHKVSPSLKGFLDRLLV 264
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ + + VGTP +++P
Sbjct: 148 VIHR----------DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAP 196
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ R YGPE D WSLG+ + EM+ GE P++ E ++ I + +LP
Sbjct: 197 ELIS-----RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-----NLPPR 246
Query: 255 VG--YEISDDAKDLMRRLIC 272
+ +++S K + RL+
Sbjct: 247 LKNLHKVSPSLKGFLDRLLV 266
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ + + VGTP +++P
Sbjct: 137 VIHR----------DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAP 185
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ R YGPE D WSLG+ + EM+ GE P++ E ++ I + +LP
Sbjct: 186 ELIS-----RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-----NLPPR 235
Query: 255 VG--YEISDDAKDLMRRLIC 272
+ +++S K + RL+
Sbjct: 236 LKNLHKVSPSLKGFLDRLLV 255
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 58 AKLREE--RDVLVYGDRRWITNLHY--AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRL-P 112
+K REE R+V V + + + Y +F+++ +LY+VMDY GGDL ++ + L
Sbjct: 64 SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ 123
Query: 113 EDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCL 172
ED + ++ LA+ +HD +H RDIK N+ L +G ++L DFG
Sbjct: 124 EDQILDWFVQICLALKHVHDRKILH----------RDIKSQNIFLTKDGTVQLGDFGIAR 173
Query: 173 RLGGDGTVQ-SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
L + TV+ + +GTP Y+SPEI Y + D W+LG +YE+ + F
Sbjct: 174 VL--NSTVELARACIGTPYYLSPEICENKP-----YNNKSDIWALGCVLYELCTLKHAFE 226
Query: 232 AESLVETYGKIMN 244
A S+ KI++
Sbjct: 227 AGSMKNLVLKIIS 239
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 104/200 (52%), Gaps = 25/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ ++ ++ L++VM++ GG L +++ R+ E+ ++ A++ +H
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR DIK D++LL +G ++L+DFG C ++ + + VGTP +++P
Sbjct: 141 VIHR----------DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAP 189
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ R YGPE D WSLG+ + EM+ GE P++ E ++ I + +LP
Sbjct: 190 ELIS-----RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-----NLPPR 239
Query: 255 VG--YEISDDAKDLMRRLIC 272
+ +++S K + RL+
Sbjct: 240 LKNLHKVSPSLKGFLDRLLV 259
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 48/259 (18%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK---FEDRLPEDMA 116
+R E VL+ I L F+ + + LV++ GG+L + + + +R D
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV 154
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA---NGHIRLADFGSCLR 173
K +++ A+A +H+ VHR D+KP+N+L + +++ADFG L
Sbjct: 155 K----QILEAVAYLHENGIVHR----------DLKPENLLYATPAPDAPLKIADFG--LS 198
Query: 174 LGGDGTVQSNVAVGTPDYISPEILTAMEEGRG-RYGPECDWWSLGVCMYEMLYGETPFYA 232
+ V GTP Y +PEIL RG YGPE D WS+G+ Y +L G PFY
Sbjct: 199 KIVEHQVLMKTVCGTPGYCAPEIL------RGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
Query: 233 ESLVE-TYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSA 291
E + + +I+N + F P E+S +AKDL+R+LI + D K
Sbjct: 253 ERGDQFMFRRILNCEYYFISPW--WDEVSLNAKDLVRKLI-----------VLDPKKRLT 299
Query: 292 LFVSLSISPRNHPWFQGIA 310
F +L HPW G A
Sbjct: 300 TFQAL-----QHPWVTGKA 313
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + ++ YLV D GG+L FED + + A I +++ ++
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL------FEDIVAREYYSEADASHCIQQILESVNH 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAV 186
H VHR D+KP+N+LL + ++LADFG + + GD A
Sbjct: 119 CHLNGIVHR----------DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA- 167
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 168 GTPGYLSPEVLR-----KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI--KA 220
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AKDL+ +++
Sbjct: 221 GAYDFPSPEWDTVTPEAKDLINKML 245
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + ++ YLV D GG+L FED + + A I +++ ++
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL------FEDIVAREYYSEADASHCIQQILESVNH 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAV 186
H VHR D+KP+N+LL + ++LADFG + + GD A
Sbjct: 119 CHLNGIVHR----------DLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA- 167
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 168 GTPGYLSPEVLR-----KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI--KA 220
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AKDL+ +++
Sbjct: 221 GAYDFPSPEWDTVTPEAKDLINKML 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 32/205 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + ++ YLV D GG+L FED + + A I +++ ++
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGEL------FEDIVAREYYSEADASHCIHQILESVNH 145
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN---GHIRLADFGSCLRLGGDGTVQSNVAV 186
IH VHR D+KP+N+LL + ++LADFG + + G+ A
Sbjct: 146 IHQHDIVHR----------DLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA- 194
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + YG D W+ GV +Y +L G PF+ E + Y +I
Sbjct: 195 GTPGYLSPEVLR-----KDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI--KA 247
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AK+L+ +++
Sbjct: 248 GAYDFPSPEWDTVTPEAKNLINQML 272
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 61 REERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYI 120
++E VL D +IT ++ + L+++M+Y GG L LL P + + YI
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK------PGPLEETYI 118
Query: 121 AEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV 180
A ++ I + L Y+H + RDIK NVLL G ++LADFG +L D +
Sbjct: 119 ATILREI--LKGLDYLHSERK----IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQI 171
Query: 181 QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+ N VGTP +++PE++ + Y + D WSLG+ E+ GE P
Sbjct: 172 KRNXFVGTPFWMAPEVIK-----QSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 30/230 (13%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I ++ F D +YL++++ G+L L K R E +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSAT 118
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++ E+ A+ H+ +HR DIKP+N+L+ G +++ADFG +
Sbjct: 119 FMEELADALHYCHERKVIHR----------DIKPENLLMGYKGELKIADFGWSVHA---P 165
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+++ GT DY+ PE++ EG+ + + D W GV YE L G PF + S ET
Sbjct: 166 SLRRRXMCGTLDYLPPEMI----EGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
Query: 239 YGKIMNHQNSFDLPSDVGYE--ISDDAKDLMRRLI-CSSDTRLGQNGIAD 285
+ +I+N D+ + +SD +KDL+ +L+ RL G+ +
Sbjct: 221 HRRIVN--------VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 30/230 (13%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I ++ F D +YL++++ G+L L K R E +
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSAT 118
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++ E+ A+ H+ +HR DIKP+N+L+ G +++ADFG +
Sbjct: 119 FMEELADALHYCHERKVIHR----------DIKPENLLMGYKGELKIADFGWSVHA---P 165
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+++ GT DY+ PE++ EG+ + + D W GV YE L G PF + S ET
Sbjct: 166 SLRRRXMCGTLDYLPPEMI----EGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
Query: 239 YGKIMNHQNSFDLPSDVGYE--ISDDAKDLMRRLI-CSSDTRLGQNGIAD 285
+ +I+N D+ + +SD +KDL+ +L+ RL G+ +
Sbjct: 221 HRRIVN--------VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 30/230 (13%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I ++ F D +YL++++ G+L L K R E +
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSAT 119
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++ E+ A+ H+ +HR DIKP+N+L+ G +++ADFG +
Sbjct: 120 FMEELADALHYCHERKVIHR----------DIKPENLLMGYKGELKIADFGWSVHA---P 166
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+++ GT DY+ PE++ EG+ + + D W GV YE L G PF + S ET
Sbjct: 167 SLRRRXMCGTLDYLPPEMI----EGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
Query: 239 YGKIMNHQNSFDLPSDVGYE--ISDDAKDLMRRLI-CSSDTRLGQNGIAD 285
+ +I+N D+ + +SD +KDL+ +L+ RL G+ +
Sbjct: 222 HRRIVN--------VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 263
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 46/214 (21%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGP---ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQN 247
+++PEI+ Y P E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVN--------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV----- 229
Query: 248 SFDLPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 -----SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 134 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 181
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 182 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 228
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 229 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 257
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 134 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 181
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 182 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 228
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 229 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 257
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L F+D YLV ++Y GG+L + + E A + +++ I +H +
Sbjct: 108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQILSGICYLHKHN 166
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANG---HIRLADFGSCLRLGGDGTVQSNVAVGTPDY 191
VHR DIKP+N+LL+ +I++ DFG D ++ +GT Y
Sbjct: 167 IVHR----------DIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD--RLGTAYY 214
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDL 251
I+PE+L + +Y +CD WS GV MY +L G PF ++ + K+ + FD
Sbjct: 215 IAPEVL------KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268
Query: 252 PSDVGYEISDDAKDLMRRLI 271
ISD+AK+L++ ++
Sbjct: 269 ND--WKNISDEAKELIKLML 286
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 41/216 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMV-------LAI 127
+ NLH +++ S + L+++Y GG++ +L LPE +AEMV L
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLC------LPE------LAEMVSENDVIRLIK 138
Query: 128 ASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN---GHIRLADFGSCLRLGGDGTVQSNV 184
+ ++Y+H+ N HL D+KP N+LL + G I++ DFG ++G ++
Sbjct: 139 QILEGVYYLHQNN--IVHL--DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE-- 192
Query: 185 AVGTPDYISPEILTAMEEGRGRYGP---ECDWWSLGVCMYEMLYGETPFYAESLVETYGK 241
+GTP+Y++PEIL Y P D W++G+ Y +L +PF E ETY
Sbjct: 193 IMGTPEYLAPEILN--------YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244
Query: 242 IMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTR 277
I Q + D + +S A D ++ L+ + +
Sbjct: 245 I--SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEK 278
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR---LPEDMAKFYIAEMVLAIASIH 131
I L + D LY+V ++ G DL + K D E +A Y+ +++ A+ H
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 132 DLHYVHRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLGGDGTVQSNVAVGT 188
D + +HR D+KP VLL + + ++L FG ++LG G V VGT
Sbjct: 150 DNNIIHR----------DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG-RVGT 198
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNS 248
P +++PE++ R YG D W GV ++ +L G PFY G I +
Sbjct: 199 PHFMAPEVVK-----REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII---KGK 250
Query: 249 FDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ + IS+ AKDL+RR+ L + ++ AL NHPW +
Sbjct: 251 YKMNPRQWSHISESAKDLVRRM-------LMLDPAERITVYEAL---------NHPWLK 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR---LPEDMAKFYIAEMVLAIASIH 131
I L + D LY+V ++ G DL + K D E +A Y+ +++ A+ H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 132 DLHYVHRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLGGDGTVQSNVAVGT 188
D + +HR D+KP VLL + + ++L FG ++LG G V VGT
Sbjct: 148 DNNIIHR----------DVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG-RVGT 196
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNS 248
P +++PE++ R YG D W GV ++ +L G PFY G I +
Sbjct: 197 PHFMAPEVVK-----REPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII---KGK 248
Query: 249 FDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQ 307
+ + IS+ AKDL+RR+ L + ++ AL NHPW +
Sbjct: 249 YKMNPRQWSHISESAKDLVRRM-------LMLDPAERITVYEAL---------NHPWLK 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+++ GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPA 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E +VL D I + F+D N+Y+VM+ GG+LL + + R + +++
Sbjct: 66 QIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEG 124
Query: 119 YIAE----MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL-DANGH--IRLADFGSC 171
Y+AE M+ A+A H H VH+ D+KP+N+L D + H I++ DFG
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHK----------DLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 172 LRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
D S A GT Y++PE+ + +CD WS GV MY +L G PF
Sbjct: 175 ELFKSDE--HSTNAAGTALYMAPEVF------KRDVTFKCDIWSAGVVMYFLLTGCLPFT 226
Query: 232 AESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDTR 277
SL E K + ++ + ++ A DL+++++ R
Sbjct: 227 GTSLEEVQQKATYKEPNYAVECR---PLTPQAVDLLKQMLTKDPER 269
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 40/211 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ LH +++ +++ L+ + GG+L L++ E L E+ A ++ +++ + +H L
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 135 YVHRPNHFAFHLCRDIKPDNV-LLDAN---GHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
H D+KP+N+ LLD N I++ DFG ++ G N+ GTP+
Sbjct: 135 IAHF----------DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNI-FGTPE 182
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD 250
+++PEI+ G E D WS+GV Y +L G +PF ++ ET +
Sbjct: 183 FVAPEIVNYEP-----LGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-------- 229
Query: 251 LPSDVGYEISDD--------AKDLMRRLICS 273
S V YE D+ AKD +RRL+
Sbjct: 230 --SAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 58 AKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRL------ 111
+ L E VL I L ++ ++ YLVM GG+L DR+
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF-------DRILERGVY 103
Query: 112 PEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL---DANGHIRLADF 168
E A I +++ A+ +H+ VHR D+KP+N+L + N I + DF
Sbjct: 104 TEKDASLVIQQVLSAVKYLHENGIVHR----------DLKPENLLYLTPEENSKIMITDF 153
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
G ++ +G + + A GTP Y++PE+L + Y D WS+GV Y +L G
Sbjct: 154 GLS-KMEQNGIMST--ACGTPGYVAPEVL-----AQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 229 PFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
PFY E+ + + KI F+ P +IS+ AKD + L+
Sbjct: 206 PFYEETESKLFEKIKEGYYEFESP--FWDDISESAKDFICHLL 246
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 48 KTVSDFIEFVAKLR----EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
K V F AK R +E D+L + + + +F +D+ L +V++ GDL +
Sbjct: 63 KKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRM 122
Query: 104 LSKFEDR---LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN 160
+ F+ + +PE Y ++ A+ +H +HR DIKP NV + A
Sbjct: 123 IKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHR----------DIKPANVFITAT 172
Query: 161 GHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCM 220
G ++L D G R T ++ VGTP Y+SPE + E G Y + D WSLG +
Sbjct: 173 GVVKLGDLG-LGRFFSSKTTAAHSLVGTPYYMSPERIH--ENG---YNFKSDIWSLGCLL 226
Query: 221 YEMLYGETPFYAESL-VETYGKIMNHQNSFDLPSD 254
YEM ++PFY + + + + K + + LPSD
Sbjct: 227 YEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSD 261
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 51/231 (22%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++L +VM+Y GG+L + R ED A+F+ +++ ++ H + HR
Sbjct: 88 THLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYAHAMQVAHR------- 139
Query: 146 LCRDIKPDNVLLDANG--HIRLADFGSCLRLGGDGTV---QSNVAVGTPDYISPEILTAM 200
D+K +N LLD + +++ADFG +V Q AVGTP YI+PE+L
Sbjct: 140 ---DLKLENTLLDGSPAPRLKIADFGY-----SKASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQNSFDLPSDVG 256
E G D WS GV +Y ML G PF ++ +T +I+N Q + +P V
Sbjct: 192 EYD----GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ--YAIPDYV- 244
Query: 257 YEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP-RNHPWF 306
IS + + L+ R+ + + +SI RNH WF
Sbjct: 245 -HISPECRHLISRIFVADPAK-----------------RISIPEIRNHEWF 277
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 21/199 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ NLH AF+D + L++++ GG+L ++ + ++ E Y+ + + +H+
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-- 167
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDAN--GHIRLADFGSCLRLGGDGTVQSNVAVGTPDYI 192
H HL DIKP+N++ + +++ DFG +L D V+ V T ++
Sbjct: 168 ------HSIVHL--DIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK--VTTATAEFA 217
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLP 252
+PEI+ R G D W++GV Y +L G +PF E +ET + FD
Sbjct: 218 APEIV-----DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD-- 270
Query: 253 SDVGYEISDDAKDLMRRLI 271
D +S +AKD ++ L+
Sbjct: 271 EDAFSSVSPEAKDFIKNLL 289
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG----- 110
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L + +
Sbjct: 111 -KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MA 163
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
N VGT Y+SPE L Y + D WS+G+ + EM G P ++ E I
Sbjct: 164 NEFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
Query: 243 MNHQNSFDLPSDV 255
+N + LPS V
Sbjct: 219 VN-EPPPKLPSAV 230
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ + + +V++Y G +L + + D++ E A+ + +++ A+ H
Sbjct: 75 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + ++++ADFG + DG + G+P+Y +P
Sbjct: 133 IVHR----------DLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAP 180
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ G+ GPE D WS GV +Y ML PF ES+ + I N + LP
Sbjct: 181 EVIS----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN--GVYTLPK- 233
Query: 255 VGYEISDDAKDLMRRLI 271
+S A L++R++
Sbjct: 234 ---FLSPGAAGLIKRML 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ + + +V++Y G +L + + D++ E A+ + +++ A+ H
Sbjct: 66 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + ++++ADFG + DG + G+P+Y +P
Sbjct: 124 IVHR----------DLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAP 171
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ G+ GPE D WS GV +Y ML PF ES+ + I N + LP
Sbjct: 172 EVIS----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN--GVYTLPK- 224
Query: 255 VGYEISDDAKDLMRRLI 271
+S A L++R++
Sbjct: 225 ---FLSPGAAGLIKRML 238
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ + + +V++Y G +L + + D++ E A+ + +++ A+ H
Sbjct: 76 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + ++++ADFG + DG + G+P+Y +P
Sbjct: 134 IVHR----------DLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAP 181
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ G+ GPE D WS GV +Y ML PF ES+ + I N + LP
Sbjct: 182 EVIS----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN--GVYTLPK- 234
Query: 255 VGYEISDDAKDLMRRLI 271
+S A L++R++
Sbjct: 235 ---FLSPGAAGLIKRML 248
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ + + +V++Y G +L + + D++ E A+ + +++ A+ H
Sbjct: 70 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
VHR D+KP+N+LLD + ++++ADFG + DG + G+P+Y +P
Sbjct: 128 IVHR----------DLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAP 175
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
E+++ G+ GPE D WS GV +Y ML PF ES+ + I N + LP
Sbjct: 176 EVIS----GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN--GVYTLPK- 228
Query: 255 VGYEISDDAKDLMRRLI 271
+S A L++R++
Sbjct: 229 ---FLSPGAAGLIKRML 242
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + Q++S YLV D GG+L FED + + A I +++ +IA
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAV 186
H VHR ++KP+N+LL + ++LADFG + + D A
Sbjct: 121 CHSNGIVHR----------NLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA- 168
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + Y D W+ GV +Y +L G PF+ E Y +I
Sbjct: 169 GTPGYLSPEVLK-----KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KA 221
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AK L+ ++
Sbjct: 222 GAYDYPSPEWDTVTPEAKSLIDSML 246
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + Q++S YLV D GG+L FED + + A I +++ +IA
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAV 186
H VHR ++KP+N+LL + ++LADFG + + D A
Sbjct: 121 CHSNGIVHR----------NLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA- 168
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + Y D W+ GV +Y +L G PF+ E Y +I
Sbjct: 169 GTPGYLSPEVLK-----KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KA 221
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AK L+ ++
Sbjct: 222 GAYDYPSPEWDTVTPEAKSLIDSML 246
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + Q++S YLV D GG+L FED + + A I +++ +IA
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESIAY 143
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAV 186
H VHR ++KP+N+LL + ++LADFG + + D A
Sbjct: 144 CHSNGIVHR----------NLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA- 191
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + Y D W+ GV +Y +L G PF+ E Y +I
Sbjct: 192 GTPGYLSPEVLK-----KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KA 244
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AK L+ ++
Sbjct: 245 GAYDYPSPEWDTVTPEAKSLIDSML 269
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDM-----AKFYIAEMVLAIAS 129
I LH + Q++S YLV D GG+L FED + + A I +++ +IA
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESIAY 119
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH---IRLADFGSCLRLGGDGTVQSNVAV 186
H VHR ++KP+N+LL + ++LADFG + + D A
Sbjct: 120 CHSNGIVHR----------NLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFA- 167
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQ 246
GTP Y+SPE+L + Y D W+ GV +Y +L G PF+ E Y +I
Sbjct: 168 GTPGYLSPEVLK-----KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI--KA 220
Query: 247 NSFDLPSDVGYEISDDAKDLMRRLI 271
++D PS ++ +AK L+ ++
Sbjct: 221 GAYDYPSPEWDTVTPEAKSLIDSML 245
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 134 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 184
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDYISPEILTAMEE 202
RD+KP+N+L + N ++L DFG + T +++ TP Y++PE+L
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVL----- 235
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEIS 260
G +Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295
Query: 261 DDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
++ K L+R L+ + T+ + I +F NHPW
Sbjct: 296 EEVKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 325
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 95 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 145
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDYISPEILTAMEE 202
RD+KP+N+L + N ++L DFG + T +++ TP Y++PE+L
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVL----- 196
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEIS 260
G +Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 256
Query: 261 DDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
++ K L+R L+ + T+ + I +F NHPW
Sbjct: 257 EEVKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 286
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 94 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 144
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ + TP Y++PE+L G
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL-----GP 197
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 198 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 257
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 258 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 285
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 88 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 138
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ + TP Y++PE+L G
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL-----GP 191
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 252 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 279
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 90 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 140
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ + TP Y++PE+L G
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL-----GP 193
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 194 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 253
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 254 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 281
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 90 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 140
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDYISPEILTAMEE 202
RD+KP+N+L + N ++L DFG + T +++ TP Y++PE+L
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVL----- 191
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEIS 260
G +Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Query: 261 DDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
++ K L+R L+ + T+ + I +F NHPW
Sbjct: 252 EEVKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 96 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 146
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ + TP Y++PE+L G
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL-----GP 199
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 200 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 259
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 260 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 287
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 140 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 190
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDYISPEILTAMEE 202
RD+KP+N+L + N ++L DFG + T +++ TP Y++PE+L
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVL----- 241
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEIS 260
G +Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 301
Query: 261 DDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
++ K L+R L+ + T+ + I +F NHPW
Sbjct: 302 EEVKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 331
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 89 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 139
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ + TP Y++PE+L G
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL-----GP 192
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 193 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 252
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 253 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 280
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG----- 126
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L +
Sbjct: 127 -KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 179
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES 234
N VGT Y+SPE L Y + D WS+G+ + EM G P + S
Sbjct: 180 NSFVGTRSYMSPERLQGTH-----YSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 104 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 154
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ + TP Y++PE+L G
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT--PCYTPYYVAPEVL-----GP 207
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 208 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 267
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 268 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 295
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 51/237 (21%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED----RLPEDMAKFYIA------EMV 124
I L+ ++D+ + LVM+ GG LL L+ F D + D+ K I E
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 125 LAIASIHD------------------------LHYVHRPNHFAFHLCRDIKPDNVLLDAN 160
+ SIH LHY+H N H RDIKP+N L N
Sbjct: 150 IN-GSIHGFRESLDFVQREKLISNIMRQIFSALHYLH--NQGICH--RDIKPENFLFSTN 204
Query: 161 G--HIRLADFG---SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
I+L DFG +L GTP +++PE+L E YGP+CD WS
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES---YGPKCDAWS 261
Query: 216 LGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI-SDDAKDLMRRLI 271
GV ++ +L G PF + +T +++N + F+ P+ Y + S A+DL+ L+
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN---YNVLSPLARDLLSNLL 315
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
F+DD+ YLV + GG +L + K + E A + ++ A+ +H HR
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQK-QKHFNEREASRVVRDVAAALDFLHTKGIAHR--- 135
Query: 142 FAFHLCRDIKPDNVLLDANGHI---RLADF--GSCLRLGGDGTVQSNVAVGTP----DYI 192
D+KP+N+L ++ + ++ DF GS ++L T + + TP +Y+
Sbjct: 136 -------DLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET---YGKIMN----- 244
+PE++ + Y CD WSLGV +Y ML G PF + G++
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 248
Query: 245 -----HQNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSIS 299
+ ++ P IS +AKDL+ +L+ A ++ +A +
Sbjct: 249 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRD---------AKQRLSAAQVL----- 294
Query: 300 PRNHPWFQGIA 310
HPW QG A
Sbjct: 295 --QHPWVQGQA 303
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 88 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 138
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG ++ TP Y++PE+L G
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTE--PCYTPYYVAPEVL-----GP 191
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 192 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 251
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
K L+R L+ + T+ + I +F NHPW
Sbjct: 252 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI 279
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 62 EERDVLV-YGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL--TLLSKFEDRLPEDMAKF 118
EE ++L+ YG I L + D ++YLV + GG+LL L KF E A F
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASF 125
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL-LDANGH---IRLADFGSCLRL 174
+ + + +H VHR D+KP N+L +D +G+ +R+ DFG +L
Sbjct: 126 VLHTIGKTVEYLHSQGVVHR----------DLKPSNILYVDESGNPECLRICDFGFAKQL 175
Query: 175 GGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES 234
+ + T ++++PE+L R Y CD WSLG+ +Y ML G TPF A
Sbjct: 176 RAENGLLMTPCY-TANFVAPEVLK-----RQGYDEGCDIWSLGILLYTMLAGYTPF-ANG 228
Query: 235 LVETYGKIMNHQNS--FDLPSDVGYEISDDAKDLMRRLI 271
+T +I+ S F L +S+ AKDL+ +++
Sbjct: 229 PSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 29/219 (13%)
Query: 62 EERDVLV-YGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL--TLLSKFEDRLPEDMAKF 118
EE ++L+ YG I L + D ++YLV + GG+LL L KF E A F
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASF 125
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL-LDANGH---IRLADFGSCLRL 174
+ + + +H VHR D+KP N+L +D +G+ +R+ DFG +L
Sbjct: 126 VLHTIGKTVEYLHSQGVVHR----------DLKPSNILYVDESGNPECLRICDFGFAKQL 175
Query: 175 GGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES 234
+ + T ++++PE+L R Y CD WSLG+ +Y ML G TPF A
Sbjct: 176 RAENGLLMTPCY-TANFVAPEVLK-----RQGYDEGCDIWSLGILLYTMLAGYTPF-ANG 228
Query: 235 LVETYGKIMNHQNS--FDLPSDVGYEISDDAKDLMRRLI 271
+T +I+ S F L +S+ AKDL+ +++
Sbjct: 229 PSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKML 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG----- 134
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L +
Sbjct: 135 -KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 187
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 188 NSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 122/278 (43%), Gaps = 55/278 (19%)
Query: 54 IEFVAKL--REERD-------VLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL--T 102
+EF K+ + +RD +L YG I L + D +Y+V + GG+LL
Sbjct: 48 MEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI 107
Query: 103 LLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL-LDANG 161
L KF E A + + + +H VHR D+KP N+L +D +G
Sbjct: 108 LRQKF---FSEREASAVLFTITKTVEYLHAQGVVHR----------DLKPSNILYVDESG 154
Query: 162 H---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGV 218
+ IR+ DFG +L + + T ++++PE+L R Y CD WSLGV
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLE-----RQGYDAACDIWSLGV 208
Query: 219 CMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGY--EISDDAKDLMRRLICSSDT 276
+Y ML G TPF A +T +I+ S GY +SD AKDL+ +++
Sbjct: 209 LLYTMLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPH 267
Query: 277 RLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI 314
+ ++ +AL + HPW + WD +
Sbjct: 268 Q---------RLTAALVL-------RHPWI--VHWDQL 287
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG----- 169
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L +
Sbjct: 170 -KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 222
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 223 NSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG- 107
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L
Sbjct: 108 -----KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 158
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 159 --MANSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG- 107
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L
Sbjct: 108 -----KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 158
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 159 --MANSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG- 107
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L
Sbjct: 108 -----KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 158
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 159 --MANSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG- 107
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L
Sbjct: 108 -----KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 158
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 159 --MANSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E VL + +I + AF D + + M++ GG L +L K R+PE +
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILG- 107
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
++IA I L Y+ R H H RD+KP N+L+++ G I+L DFG +L
Sbjct: 108 -----KVSIAVIKGLTYL-REKHKIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 158
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+N VGT Y+SPE L Y + D WS+G+ + EM G P
Sbjct: 159 --MANSFVGTRSYMSPERLQGT-----HYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E D+L D I L AF ++NL++++++ GG + ++ + E L E + +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
+ A+ +HD +H RD+K N+L +G I+LADFG + +
Sbjct: 117 TLDALNYLHDNKIIH----------RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR 166
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +GTP +++PE++ Y + D WSLG+ + EM E P +
Sbjct: 167 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 43 SLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLT 102
++++ SD E + +E ++ D + + ++ +++L++VM+Y G +
Sbjct: 58 AIKQVPVESDLQEII----KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 103 LLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH 162
++ L ED IA ++ + ++ L Y+H F + RDIK N+LL+ GH
Sbjct: 114 IIRLRNKTLTED----EIATILQS--TLKGLEYLH----FMRKIHRDIKAGNILLNTEGH 163
Query: 163 IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
+LADFG +L D + N +GTP +++PE++ + Y D WSLG+ E
Sbjct: 164 AKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQEI-----GYNCVADIWSLGITAIE 217
Query: 223 MLYGETPF 230
M G+ P+
Sbjct: 218 MAEGKPPY 225
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 53/232 (22%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++L +VM+Y GG+L + R ED A+F+ +++ ++ H + HR
Sbjct: 87 THLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHR------- 138
Query: 146 LCRDIKPDNVLLDANG--HIRLADFG----SCLRLGGDGTVQSNVAVGTPDYISPEILTA 199
D+K +N LLD + +++ DFG S L Q VGTP YI+PE+L
Sbjct: 139 ---DLKLENTLLDGSPAPRLKICDFGYSKSSVLH------SQPKSTVGTPAYIAPEVLLK 189
Query: 200 MEEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQNSFDLPSDV 255
E G D WS GV +Y ML G PF ++ +T +I+N Q + +P V
Sbjct: 190 KEYD----GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ--YAIPDYV 243
Query: 256 GYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP-RNHPWF 306
IS + + L+ R+ + + +SI RNH WF
Sbjct: 244 --HISPECRHLISRIFVADPAK-----------------RISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 53/232 (22%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++L +VM+Y GG+L + R ED A+F+ +++ ++ H + HR
Sbjct: 88 THLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHR------- 139
Query: 146 LCRDIKPDNVLLDANGHIRLA--DFG----SCLRLGGDGTVQSNVAVGTPDYISPEILTA 199
D+K +N LLD + RL DFG S L Q VGTP YI+PE+L
Sbjct: 140 ---DLKLENTLLDGSPAPRLKICDFGYSKSSVLH------SQPKSTVGTPAYIAPEVLLK 190
Query: 200 MEEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQNSFDLPSDV 255
E G D WS GV +Y ML G PF ++ +T +I+N Q + +P V
Sbjct: 191 KEYD----GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ--YAIPDYV 244
Query: 256 GYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP-RNHPWF 306
IS + + L+ R+ + + +SI RNH WF
Sbjct: 245 --HISPECRHLISRIFVADPAK-----------------RISIPEIRNHEWF 277
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP--EDMAKFYIAEMVLAIASIHDLHYVHR 138
+F ++ + + M+ GG L LL L E FY +++ + +HD VHR
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 139 PNHFAFHLCRDIKPDNVLLDA-NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEIL 197
DIK DNVL++ +G ++++DFG+ RL G + GT Y++PEI+
Sbjct: 147 ----------DIKGDNVLINTYSGVLKISDFGTSKRLAGINPC-TETFTGTLQYMAPEII 195
Query: 198 TAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
++G YG D WSLG + EM G+ PFY
Sbjct: 196 ---DKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFE-DRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
D L+LVM++ G + L+ + + L E+ + E++ ++ +H +HR
Sbjct: 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHR----- 153
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV-QSNVAVGTPDYISPEILTAMEE 202
DIK NVLL N ++L DFG +L D TV + N +GTP +++PE++ E
Sbjct: 154 -----DIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIACDEN 206
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y + D WSLG+ EM G P
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP--EDMAK 117
L EE + + + I +F ++ + + M+ GG L LL L E
Sbjct: 52 LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG 111
Query: 118 FYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA-NGHIRLADFGSCLRLGG 176
FY +++ + +HD VHR DIK DNVL++ +G ++++DFG+ RL G
Sbjct: 112 FYTKQILEGLKYLHDNQIVHR----------DIKGDNVLINTYSGVLKISDFGTSKRLAG 161
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ GT Y++PEI+ ++G YG D WSLG + EM G+ PFY
Sbjct: 162 INPC-TETFTGTLQYMAPEII---DKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E D+L D I L AF ++NL++++++ GG + ++ + E L E + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
+ A+ +HD +H RD+K N+L +G I+LADFG + T+Q
Sbjct: 144 TLDALNYLHDNKIIH----------RDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQR 191
Query: 183 NVA-VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +GTP +++PE++ Y + D WSLG+ + EM E P +
Sbjct: 192 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 120/290 (41%), Gaps = 52/290 (17%)
Query: 43 SLRREKTVSDFIEFVAKLRE--ERDVLVYGDRRW--ITNLHYAFQDDSNLYLVMDYYCGG 98
L +E +IE A + E +R+++ + R I ++L ++M+Y GG
Sbjct: 42 KLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG 101
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + R ED A+F+ +++ ++ H + HR D+K +N LLD
Sbjct: 102 ELYERICN-AGRFSEDEARFFFQQLLSGVSYCHSMQICHR----------DLKLENTLLD 150
Query: 159 ANGHIRL--ADFGSCLRLGGDGTV---QSNVAVGTPDYISPEILTAMEEGRGRYGPECDW 213
+ RL DFG +V Q VGTP YI+PE+L E G D
Sbjct: 151 GSPAPRLKICDFGY-----SKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD----GKIADV 201
Query: 214 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNS--FDLPSDVGYEISDDAKDLMRRL- 270
WS GV +Y ML G PF Y K + S + +P D+ IS + L+ R+
Sbjct: 202 WSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECCHLISRIF 259
Query: 271 ICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF-QGIAWDSIRDSNA 319
+ TR+ I + H WF + + D + +SN
Sbjct: 260 VADPATRISIPEI-----------------KTHSWFLKNLPADLMNESNT 292
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++L +VM+Y GG+L + R ED A+F+ +++ ++ H + HR
Sbjct: 88 THLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHR------- 139
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+K +N LLD + RL Q VGTP YI+PE+L E
Sbjct: 140 ---DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD-- 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQNSFDLPSDVGYEISD 261
G D WS GV +Y ML G PF ++ +T +I+N Q + +P V IS
Sbjct: 195 --GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ--YAIPDYV--HISP 248
Query: 262 DAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP-RNHPWF 306
+ + L+ R+ + + +SI RNH WF
Sbjct: 249 ECRHLISRIFVADPAK-----------------RISIPEIRNHEWF 277
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 60 LREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFY 119
+++E +L R I +LH +F+ L ++ ++ G D+ ++ L E Y
Sbjct: 48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSY 107
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA--NGHIRLADFGSCLRLG-G 176
+ ++ A+ +H H HF DI+P+N++ + I++ +FG +L G
Sbjct: 108 VHQVCEALQFLHS----HNIGHF------DIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157
Query: 177 DGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
D + P+Y +PE+ D WSLG +Y +L G PF AE+
Sbjct: 158 DNF---RLLFTAPEYYAPEV-----HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
Query: 237 ETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICS 273
+ IMN + +FD + EIS +A D + RL+
Sbjct: 210 QIIENIMNAEYTFD--EEAFKEISIEAMDFVDRLLVK 244
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 41/226 (18%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +V + GG+L S+ +DR + + +E+ +I + Y+H N H
Sbjct: 134 LLIVXECLDGGELF---SRIQDRGDQAFTEREASEIXKSIGEA--IQYLHSIN--IAH-- 184
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDYISPEILTAMEE 202
RD+KP+N+L + N ++L DFG + T +++ TP Y++PE+L
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFG----FAKETTSHNSLTTPCYTPYYVAPEVL----- 235
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHQNSFDLPSDVGYEIS 260
G +Y CD WSLGV Y +L G PFY+ + K ++ P+ E+S
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVS 295
Query: 261 DDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWF 306
++ K L+R L+ + T+ + I +F NHPW
Sbjct: 296 EEVKXLIRNLLKTEPTQ--RXTITEFX--------------NHPWI 325
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 47/238 (19%)
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
N+H+ L ++M+ GG+L S+ ++R + + AE++ I + +
Sbjct: 93 NMHHG---KRCLLIIMECMEGGELF---SRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 137 HRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDY 191
H H RD+KP+N+L + + ++L DFG T Q+ + TP Y
Sbjct: 147 HNIAH------RDVKPENLLYTSKEKDAVLKLTDFGF-----AKETTQNALQTPCYTPYY 195
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHQNSF 249
++PE+L G +Y CD WSLGV MY +L G PFY+ + + K +
Sbjct: 196 VAPEVL-----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 250
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP-RNHPWF 306
P+ E+S+DAK L+R L+ + T L+I+ NHPW
Sbjct: 251 GFPNPEWSEVSEDAKQLIRLLLKTDPTE-----------------RLTITQFMNHPWI 291
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 77 NLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
N+H+ L ++M+ GG+L S+ ++R + + AE++ I + +
Sbjct: 74 NMHHG---KRCLLIIMECMEGGELF---SRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 137 HRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLGGDGTVQSNVAVG--TPDY 191
H H RD+KP+N+L + + ++L DFG T Q+ + TP Y
Sbjct: 128 HNIAH------RDVKPENLLYTSKEKDAVLKLTDFGF-----AKETTQNALQTPCYTPYY 176
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHQNSF 249
++PE+L G +Y CD WSLGV MY +L G PFY+ + + K +
Sbjct: 177 VAPEVL-----GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY 231
Query: 250 DLPSDVGYEISDDAKDLMRRLICSSDT 276
P+ E+S+DAK L+R L+ + T
Sbjct: 232 GFPNPEWSEVSEDAKQLIRLLLKTDPT 258
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 41/226 (18%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++L +VM+Y GG+L + R ED A+F+ +++ ++ H + HR
Sbjct: 88 THLAIVMEYASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHR------- 139
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+K +N LLD + RL Q VGTP YI+PE+L E
Sbjct: 140 ---DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD-- 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQNSFDLPSDVGYEISD 261
G D WS GV +Y ML G PF ++ +T +I+N Q + +P V IS
Sbjct: 195 --GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ--YAIPDYV--HISP 248
Query: 262 DAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP-RNHPWF 306
+ + L+ R+ + + +SI RNH WF
Sbjct: 249 ECRHLISRIFVADPAK-----------------RISIPEIRNHEWF 277
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 23/221 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+++ E V+ D + L+ AF+ +++ LVM+Y GG+L + L E
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL 191
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL---DANGHIRLADFGSCLRLG 175
++ ++ I +H ++ +H D+KP+N+L DA I++ DFG R
Sbjct: 192 FMKQICEGIRHMHQMYILH----------LDLKPENILCVNRDAK-QIKIIDFGLARRYK 240
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESL 235
++ N GTP++++PE++ D WS+GV Y +L G +PF ++
Sbjct: 241 PREKLKVN--FGTPEFLAPEVVNY-----DFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
Query: 236 VETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT 276
ET I+ + +DL + +IS++AK+ + +L+ +
Sbjct: 294 AETLNNILACR--WDLEDEEFQDISEEAKEFISKLLIKEKS 332
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E D+L D I L AF ++NL++++++ GG + ++ + E L E + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
+ A+ +HD +H RD+K N+L +G I+LADFG + +
Sbjct: 144 TLDALNYLHDNKIIH----------RDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRR 192
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +GTP +++PE++ Y + D WSLG+ + EM E P +
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E D+L D I L AF ++NL++++++ GG + ++ + E L E + +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
+ A+ +HD +H RD+K N+L +G I+LADFG + +
Sbjct: 144 TLDALNYLHDNKIIH----------RDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRR 192
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +GTP +++PE++ Y + D WSLG+ + EM E P +
Sbjct: 193 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 55/277 (19%)
Query: 55 EFVAKL--REERD-------VLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL--TL 103
EF K+ + +RD +L YG I L + D +Y+V + GG+LL L
Sbjct: 49 EFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL 108
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL-LDANGH 162
KF E A + + + +H VHR D+KP N+L +D +G+
Sbjct: 109 RQKF---FSEREASAVLFTITKTVEYLHAQGVVHR----------DLKPSNILYVDESGN 155
Query: 163 ---IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVC 219
IR+ DFG +L + + T ++++PE+L R Y CD WSLGV
Sbjct: 156 PESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLE-----RQGYDAACDIWSLGVL 209
Query: 220 MYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGY--EISDDAKDLMRRLICSSDTR 277
+Y L G TPF A +T +I+ S GY +SD AKDL+ + + +
Sbjct: 210 LYTXLTGYTPF-ANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQ 268
Query: 278 LGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSI 314
++ +AL + HPW + WD +
Sbjct: 269 ---------RLTAALVL-------RHPWI--VHWDQL 287
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 14/193 (7%)
Query: 66 VLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVL 125
VL D +I F ++++++ M+ + T K + R+ + + + +M +
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMEL-----MGTCAEKLKKRMQGPIPERILGKMTV 131
Query: 126 AIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA 185
AI + L+Y+ + H H RD+KP N+LLD G I+L DFG RL D + +
Sbjct: 132 AI--VKALYYL-KEKHGVIH--RDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRS 184
Query: 186 VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY-AESLVETYGKIMN 244
G Y++PE + + + Y D WSLG+ + E+ G+ P+ ++ E K++
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 245 HQNSFDLPSDVGY 257
+ LP +G+
Sbjct: 245 EEPPL-LPGHMGF 256
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E VL + +I + AF D + + M++ GG L +L K R+PE++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEILG----- 117
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
++IA + L Y+ R H H RD+KP N+L+++ G I+L DFG +L +
Sbjct: 118 -KVSIAVLRGLAYL-REKHQIMH--RDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA 170
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY---AESLVETY 239
N VGT Y++PE L Y + D WS+G+ + E+ G P A+ L +
Sbjct: 171 NSFVGTRSYMAPERLQGT-----HYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
Query: 240 GK 241
G+
Sbjct: 226 GR 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E ++L D +I L A+ D L++++++ GG + ++ + + L E + +
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 117
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
M+ A+ +H +HR D+K NVL+ G IRLADFG + T+Q
Sbjct: 118 MLEALNFLHSKRIIHR----------DLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQK 165
Query: 183 NVA-VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +GTP +++PE++ Y + D WSLG+ + EM E P +
Sbjct: 166 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 63 ERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
E ++L D +I L A+ D L++++++ GG + ++ + + L E + +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS 182
M+ A+ +H +HR D+K NVL+ G IRLADFG + T+Q
Sbjct: 126 MLEALNFLHSKRIIHR----------DLKAGNVLMTLEGDIRLADFGVSAK--NLKTLQK 173
Query: 183 NVA-VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +GTP +++PE++ Y + D WSLG+ + EM E P +
Sbjct: 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 25/213 (11%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
+LR E ++ + I L+ F D +YL+++Y G+L L K E
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK-SCTFDEQRTAT 127
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
+ E+ A+ H +HR DIKP+N+LL G +++ADFG +
Sbjct: 128 IMEELADALMYCHGKKVIHR----------DIKPENLLLGLKGELKIADFGWSVHAP--- 174
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+++ GT DY+ PE++ EGR + + D W +GV YE+L G PF + S ET
Sbjct: 175 SLRRKTMCGTLDYLPPEMI----EGR-MHNEKVDLWCIGVLCYELLVGNPPFESASHNET 229
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLI 271
Y +I+ F G A+DL+ +L+
Sbjct: 230 YRRIVKVDLKFPASVPTG------AQDLISKLL 256
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
YLV + GG +L+ + K E A + ++ A+ +H+ HR
Sbjct: 86 FYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDVASALDFLHNKGIAHR--------- 135
Query: 148 RDIKPDNVLLDANGHI---RLADF--GSCLRLGGDGTVQSNVAVGTP----DYISPEILT 198
D+KP+N+L + + ++ DF GS ++L GD + S + TP +Y++PE++
Sbjct: 136 -DLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES-------LVETYGKIMN------H 245
A E Y CD WSLGV +Y +L G PF E N
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ 254
Query: 246 QNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPW 305
+ ++ P IS AKDL+ +L+ + D K + L HPW
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLL-----------VRDAKQRLSAAQVL-----QHPW 298
Query: 306 FQGIA 310
QG A
Sbjct: 299 VQGCA 303
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 49/245 (20%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
YLV + GG +L+ + K E A + ++ A+ +H+ HR
Sbjct: 86 FYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDVASALDFLHNKGIAHR--------- 135
Query: 148 RDIKPDNVLLDANGHI---RLADFG--SCLRLGGDGTVQSNVAVGTP----DYISPEILT 198
D+KP+N+L + + ++ DFG S ++L GD + S + TP +Y++PE++
Sbjct: 136 -DLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAES-------LVETYGKIMN------H 245
A E Y CD WSLGV +Y +L G PF E N
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ 254
Query: 246 QNSFDLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPW 305
+ ++ P IS AKDL+ +L+ + D K + L HPW
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLL-----------VRDAKQRLSAAQVL-----QHPW 298
Query: 306 FQGIA 310
QG A
Sbjct: 299 VQGCA 303
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
E V I+ + +LR + + + ++ Y ++ +Y+VM+Y G L S
Sbjct: 50 EANVKKEIQLLRRLRHKNVI-------QLVDVLYN-EEKQKMYMVMEYCVCGMQEMLDSV 101
Query: 107 FEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
E R P A Y +++ + +H VH +DIKP N+LL G ++++
Sbjct: 102 PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH----------KDIKPGNLLLTTGGTLKIS 151
Query: 167 DFGSCLRL---GGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
G L D T ++ + G+P + PEI ++ G + D WS GV +Y +
Sbjct: 152 ALGVAEALHPFAADDTCRT--SQGSPAFQPPEIANGLDTFSGF---KVDIWSAGVTLYNI 206
Query: 224 LYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLM 267
G PF +++ + + I + S+ +P D G +SD K ++
Sbjct: 207 TTGLYPFEGDNIYKLFENI--GKGSYAIPGDCGPPLSDLLKGML 248
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 128 ASIHDLHYVHRPNHFAFHLC-RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAV 186
+ ++ Y+H + +C RD+KP N+L+D NG ++L+DFG + D ++ +
Sbjct: 159 SVLNSFSYIHNEKN----ICHRDVKPSNILMDKNGRVKLSDFGESEYM-VDKKIKG--SR 211
Query: 187 GTPDYISPEILTAMEEGRGRY-GPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKI 242
GT +++ PE + Y G + D WSLG+C+Y M Y PF + SLVE + I
Sbjct: 212 GTYEFMPPEFFS----NESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ NL F+ L+LV +Y C +L L +++ +PE + K + + A+ H +
Sbjct: 64 LVNLLEVFRRKRRLHLVFEY-CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP+N+L+ + I+L DFG L G + V T Y SP
Sbjct: 123 CIHR----------DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD-EVATRWYRSP 171
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
E+L G +YGP D W++G E+L G
Sbjct: 172 ELLV----GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 56/304 (18%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 40 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 96
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 97 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 145
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VGT +Y
Sbjct: 146 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 194
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 252
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSIS 299
NH+ F D+P KDL L C R + I+ ++ + +V +
Sbjct: 253 IDPNHEIEFPDIPE----------KDLQDVLKCCL-KRDPKQRISIPELLAHPYVQIQTH 301
Query: 300 PRNH 303
P N
Sbjct: 302 PVNQ 305
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 56/304 (18%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 68 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 124
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 125 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VGT +Y
Sbjct: 174 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 280
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSIS 299
NH+ F D+P KDL L C R + I+ ++ + +V +
Sbjct: 281 IDPNHEIEFPDIPE----------KDLQDVLKCCL-KRDPKQRISIPELLAHPYVQIQTH 329
Query: 300 PRNH 303
P N
Sbjct: 330 PVNQ 333
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 70 GDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS 129
G L A+++ LYL + CG L + LPE Y+ + +LA+A
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAH 172
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
+H VH D+KP N+ L G +L DFG + LG G V G P
Sbjct: 173 LHSQGLVHL----------DVKPANIFLGPRGRCKLGDFGLLVELGTAGA--GEVQEGDP 220
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
Y++PE+L +G YG D +SLG+ + E+
Sbjct: 221 RYMAPELL------QGSYGTAADVFSLGLTILEV 248
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 56/304 (18%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 24 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 80
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 81 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 129
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VGT +Y
Sbjct: 130 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 178
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 236
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSIS 299
NH+ F D+P KDL L C R + I+ ++ + +V +
Sbjct: 237 IDPNHEIEFPDIPE----------KDLQDVLKCCL-KRDPKQRISIPELLAHPYVQIQTH 285
Query: 300 PRNH 303
P N
Sbjct: 286 PVNQ 289
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 45/253 (17%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 21 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 77
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 78 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 126
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VGT +Y
Sbjct: 127 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 233
Query: 244 ---NHQNSF-DLP 252
NH+ F D+P
Sbjct: 234 IDPNHEIEFPDIP 246
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 54 IEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPE 113
+ F+ KLR + G + + +LVM+Y C G LL + L E
Sbjct: 105 VRFLQKLRHPNTIQYRG----------CYLREHTAWLVMEY-CLGSASDLLEVHKKPLQE 153
Query: 114 DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLR 173
+ + ++ L Y+H +H H RD+K N+LL G ++L DFGS
Sbjct: 154 ------VEIAAVTHGALQGLAYLH--SHNMIH--RDVKAGNILLSEPGLVKLGDFGSASI 203
Query: 174 LGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +N VGTP +++PE++ AM+E G+Y + D WSLG+ E+ + P +
Sbjct: 204 MA-----PANXFVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 133/304 (43%), Gaps = 56/304 (18%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 20 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 76
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 77 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 125
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VGT +Y
Sbjct: 126 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 174
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 232
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSIS 299
NH+ F D+P KDL L C R + I+ ++ + +V +
Sbjct: 233 IDPNHEIEFPDIPE----------KDLQDVLKCCL-KRDPKQRISIPELLAHPYVQIQTH 281
Query: 300 PRNH 303
P N
Sbjct: 282 PVNQ 285
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 121/273 (44%), Gaps = 55/273 (20%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 68 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 124
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 125 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VGT +Y
Sbjct: 174 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 280
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLIC 272
NH+ F D+P KDL L C
Sbjct: 281 IDPNHEIEFPDIPE----------KDLQDVLKC 303
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 28/178 (15%)
Query: 54 IEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPE 113
+ F+ KLR + G + + +LVM+Y C G LL + L E
Sbjct: 66 VRFLQKLRHPNTIQYRG----------CYLREHTAWLVMEY-CLGSASDLLEVHKKPLQE 114
Query: 114 DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLR 173
+ + ++ L Y+H +H H RD+K N+LL G ++L DFGS
Sbjct: 115 ------VEIAAVTHGALQGLAYLH--SHNMIH--RDVKAGNILLSEPGLVKLGDFGSASI 164
Query: 174 LGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ +N VGTP +++PE++ AM+E G+Y + D WSLG+ E+ + P +
Sbjct: 165 MA-----PANXFVGTPYWMAPEVILAMDE--GQYDGKVDVWSLGITCIELAERKPPLF 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLL----SKFEDR---LPEDMAKFYIAEMVLAI 127
I + + +F L+LVM GG +L ++ +K E + L E + E++ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 128 ASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA-- 185
+H +HR D+K N+LL +G +++ADFG L G + N
Sbjct: 135 EYLHKNGQIHR----------DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 186 --VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
VGTP +++PE+ ME+ RG Y + D WS G+ E+ G P++
Sbjct: 185 TFVGTPCWMAPEV---MEQVRG-YDFKADIWSFGITAIELATGAAPYH 228
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLL----SKFEDR---LPEDMAKFYIAEMVLAI 127
I + + +F L+LVM GG +L ++ +K E + L E + E++ +
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 128 ASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA-- 185
+H +HR D+K N+LL +G +++ADFG L G + N
Sbjct: 130 EYLHKNGQIHR----------DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 186 --VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
VGTP +++PE+ ME+ RG Y + D WS G+ E+ G P++
Sbjct: 180 TFVGTPCWMAPEV---MEQVRG-YDFKADIWSFGITAIELATGAAPYH 223
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 44 LRREKTVSD-FIE--FVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGG-D 99
+++EK + D +IE + K+ E +L + I + F++ LVM+ + G D
Sbjct: 57 IKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLD 116
Query: 100 LLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA 159
L + + RL E +A + ++V A+ + +HR DIK +N+++
Sbjct: 117 LFAFIDR-HPRLDEPLASYIFRQLVSAVGYLRLKDIIHR----------DIKDENIVIAE 165
Query: 160 NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVC 219
+ I+L DFGS L + GT +Y +PE+L G GPE + WSLGV
Sbjct: 166 DFTIKLIDFGSAAYLERGKLFYT--FCGTIEYCAPEVLM----GNPYRGPELEMWSLGVT 219
Query: 220 MYEMLYGETPF 230
+Y +++ E PF
Sbjct: 220 LYTLVFEENPF 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 38 ECCNSSLRREKTVSDFIE-----FVAKL-REERDVLVYGDRRWITNLHYAFQDDSNLYLV 91
+C N R + F+E V K+ E +L + NL + YLV
Sbjct: 43 KCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102
Query: 92 MDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIK 151
++ +L L F + L + + Y+ +++ I H + +HR DIK
Sbjct: 103 FEF-VDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHR----------DIK 151
Query: 152 PDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPEC 211
P+N+L+ +G ++L DFG L G V + V T Y +PE+L G +YG
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGEVYDD-EVATRWYRAPELLV----GDVKYGKAV 206
Query: 212 DWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
D W++G + EM GE F +S ++ IM
Sbjct: 207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+VM+Y G L ++ E + A IA+ A+ H +HR
Sbjct: 92 YIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSHQNGIIHR---------- 140
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLG--GDGTVQSNVAVGTPDYISPEILTAMEEGRG- 205
D+KP N+L+ A +++ DFG + G+ Q+ +GT Y+SP E+ RG
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP------EQARGD 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
D +SLG +YE+L GE PF +S V
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 56/304 (18%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 40 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 96
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 97 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 145
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D V + VGT +Y
Sbjct: 146 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNY 194
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 252
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSIS 299
NH+ F D+P KDL L C R + I+ ++ + +V +
Sbjct: 253 IDPNHEIEFPDIPE----------KDLQDVLKCCL-KRDPKQRISIPELLAHPYVQIQTH 301
Query: 300 PRNH 303
P N
Sbjct: 302 PVNQ 305
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 55/273 (20%)
Query: 18 GKGRVFSI----ETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR 73
G +VF + + + I V +E N +L + + I ++ KL++ D ++
Sbjct: 68 GSSKVFQVLNEKKQIYAIKYVNLEEADNQTL---DSYRNEIAYLNKLQQHSDKIIRLYDY 124
Query: 74 WITNLHYAFQDDSNLYLVMDYYCGG-DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD 132
IT D +Y+VM+ CG DL + L K + P + K Y M+ A+ +IH
Sbjct: 125 EIT--------DQYIYMVME--CGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDY 191
VH D+KP N L+ +G ++L DFG ++ D T V + VG +Y
Sbjct: 174 HGIVHS----------DLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 192 ISPEILTAMEEGRGR------YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM-- 243
+ PE + M R P+ D WSLG +Y M YG+TPF + ++ K+
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 280
Query: 244 ---NHQNSF-DLPSDVGYEISDDAKDLMRRLIC 272
NH+ F D+P KDL L C
Sbjct: 281 IDPNHEIEFPDIPE----------KDLQDVLKC 303
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ A L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICIN------AMLNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+VM+Y G L ++ E + A IA+ A+ H +HR
Sbjct: 92 YIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSHQNGIIHR---------- 140
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLG--GDGTVQSNVAVGTPDYISPEILTAMEEGRG- 205
D+KP N+++ A +++ DFG + G+ Q+ +GT Y+SP E+ RG
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP------EQARGD 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
D +SLG +YE+L GE PF +S V
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+VM+Y G L ++ E + A IA+ A+ H +HR
Sbjct: 92 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHR---------- 140
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLG--GDGTVQSNVAVGTPDYISPEILTAMEEGRG- 205
D+KP N+++ A +++ DFG + G+ Q+ +GT Y+SP E+ RG
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP------EQARGD 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
D +SLG +YE+L GE PF +S V
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+VM+Y G L ++ E + A IA+ A+ H +HR
Sbjct: 92 YIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSHQNGIIHR---------- 140
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLG--GDGTVQSNVAVGTPDYISPEILTAMEEGRG- 205
D+KP N+++ A +++ DFG + G+ Q+ +GT Y+SP E+ RG
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP------EQARGD 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
D +SLG +YE+L GE PF +S V
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEIXINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLL-NKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLL-NKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEIXINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+VM+Y G L ++ E + A IA+ A+ H +HR
Sbjct: 109 YIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHR---------- 157
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLG--GDGTVQSNVAVGTPDYISPEILTAMEEGRG- 205
D+KP N+++ A +++ DFG + G+ Q+ +GT Y+SP E+ RG
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP------EQARGD 211
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFYAESLV 236
D +SLG +YE+L GE PF +S V
Sbjct: 212 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEIXINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 46 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 88
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 89 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 137
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 138 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 192
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 193 GIVLTAMLAGELPW 206
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLL-NKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMXGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 47 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 89
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 90 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 138
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERL-LNKMCGTLPYVAPELL----KRREFHAEPVDVWSC 193
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 194 GIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLL-NKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLL-NKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 40 CNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNL-YLVMDYYCGG 98
C ++++E ++ L E V YG RR + N+ YL ++Y GG
Sbjct: 48 CPENIKKEICINKM------LNHENVVKFYGHRR-----------EGNIQYLFLEYCSGG 90
Query: 99 DLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD 158
+L + + +PE A+ + +++ + +H + HR DIKP+N+LLD
Sbjct: 91 ELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIGITHR----------DIKPENLLLD 139
Query: 159 ANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSL 216
+++++DFG + R + N GT Y++PE+L + R + D WS
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLL-NKMCGTLPYVAPELL----KRREFHAEPVDVWSC 194
Query: 217 GVCMYEMLYGETPF 230
G+ + ML GE P+
Sbjct: 195 GIVLTAMLAGELPW 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+VM+Y G L ++ E + A IA+ A+ H +HR
Sbjct: 92 YIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNFSHQNGIIHR---------- 140
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLG--GDGTVQSNVAVGTPDYISPEILTAMEEGRG- 205
D+KP N+++ A +++ DFG + G+ Q+ +GT Y+SP E+ RG
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP------EQARGD 194
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFYAES 234
D +SLG +YE+L GE PF +S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 65/241 (26%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L +VM+ GG+L S+ +DR + + +E++ +I + Y+H N H
Sbjct: 90 LLIVMECLDGGELF---SRIQDRGDQAFTEREASEIMKSIGEA--IQYLHSIN--IAH-- 140
Query: 148 RDIKPDNVLLDA---NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
RD+KP+N+L + N ++L DFG G+
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTGE--------------------------- 173
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYG-KIMNHQNSFDLPSDVGYEISDD 262
+Y CD WSLGV MY +L G PFY+ L + G K ++ P+ E+S++
Sbjct: 174 -KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEE 232
Query: 263 AKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGIAWDSIRDSNAPYI 322
K L+R L+ + T+ + I +F NHPW ++ + P
Sbjct: 233 VKMLIRNLLKTEPTQ--RMTITEF--------------MNHPWI-------MQSTKVPQT 269
Query: 323 P 323
P
Sbjct: 270 P 270
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
D ++ YLVM + G DL L+ ++L ED +F + +M+ + IH +HR
Sbjct: 101 DFTDFYLVMPF-MGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR----- 152
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPE-ILTAMEE 202
D+KP N+ ++ + +++ DFG L + V T Y +PE IL M
Sbjct: 153 -----DLKPGNLAVNEDCELKILDFG----LARQADSEMXGXVVTRWYRAPEVILNWM-- 201
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI-SD 261
RY D WS+G M EM+ G+T F ++ +IM + P++ + SD
Sbjct: 202 ---RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGT--PPAEFVQRLQSD 256
Query: 262 DAKDLMRRL 270
+AK+ M+ L
Sbjct: 257 EAKNYMKGL 265
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L AF SN+ LV D+ DL ++ L K Y+ + ++ L
Sbjct: 74 IIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM------LMTLQGLE 126
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
Y+H+ H+ H RD+KP+N+LLD NG ++LADFG G + V T Y +P
Sbjct: 127 YLHQ--HWILH--RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAP 181
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
E+L G YG D W++G + E+L PF
Sbjct: 182 ELLF----GARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ L LV ++ DL LL E L AK ++ +++ IA HD
Sbjct: 62 IVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++ G +++ADFG R G + V T Y +P
Sbjct: 121 VLHR----------DLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAP 169
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY-----AESLVETYGKIMNHQNSF 249
++L G +Y D WS+G EM+ G TP + A+ L+ + +I+ NS
Sbjct: 170 DVLM----GSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIF-RILGTPNSK 223
Query: 250 DLPS 253
+ P+
Sbjct: 224 NWPN 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 50 VSDFIEFVA---KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
V++F+ VA +LR VL G A NL +V +Y G L LL K
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMG----------AVTQPPNLSIVTEYLSRGSLYRLLHK 127
Query: 107 FEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
R D + + +A ++Y+H N H RD+K N+L+D +++
Sbjct: 128 SGAREQLDERR----RLSMAYDVAKGMNYLHNRNPPIVH--RDLKSPNLLVDKKYTVKVC 181
Query: 167 DFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
DFG RL + S A GTP++++PE+L + D +S GV ++E+
Sbjct: 182 DFGLS-RLKASXFLXSKXAAGTPEWMAPEVLRDEPSNE-----KSDVYSFGVILWELATL 235
Query: 227 ETPFYAESLVETYGKIMNHQNSFDLPSDVGYEIS 260
+ P+ + + + ++P ++ +++
Sbjct: 236 QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 19/142 (13%)
Query: 105 SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHI 163
+K + +P + K Y+ +++ ++A IH + H RDIKP N+LLD +G +
Sbjct: 132 AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICH----------RDIKPQNLLLDPPSGVL 181
Query: 164 RLADFGSC-LRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
+L DFGS + + G+ V + + Y +PE++ G Y D WS G M E
Sbjct: 182 KLIDFGSAKILIAGEPNVS---XICSRYYRAPELIF----GATNYTTNIDIWSTGCVMAE 234
Query: 223 MLYGETPFYAESLVETYGKIMN 244
++ G+ F ES ++ +I+
Sbjct: 235 LMQGQPLFPGESGIDQLVEIIK 256
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ L LV ++ DL LL E L AK ++ +++ IA HD
Sbjct: 62 IVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++ G +++ADFG R G + + T Y +P
Sbjct: 121 VLHR----------DLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIVTLWYRAP 169
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY-----AESLVETYGKIMNHQNSF 249
++L G +Y D WS+G EM+ G TP + A+ L+ + +I+ NS
Sbjct: 170 DVLM----GSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMRIF-RILGTPNSK 223
Query: 250 DLPS 253
+ P+
Sbjct: 224 NWPN 227
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA-EMVLAIASIHDLHYVHRPNHF 142
+D ++YLV DY DL ++ + E + K Y+ +++ I +H +HR
Sbjct: 82 NDRDVYLVFDY-METDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHR---- 133
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA----------------- 185
D+KP N+LL+A H+++ADFG V +N+
Sbjct: 134 ------DMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 186 ---VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
V T Y +PEIL G +Y D WSLG + E+L G+ F S + +I
Sbjct: 188 TDYVATRWYRAPEILL----GSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 243 MNHQNSFDLPS--DVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISP 300
+ D PS DV S AK ++ L + R N F W L L I+P
Sbjct: 244 I---GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIR-QSNKRDIFTKWKNLL--LKINP 297
Query: 301 R 301
+
Sbjct: 298 K 298
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 33/198 (16%)
Query: 49 TVSDFIEFVAKLREERDVLVYG---DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLS 105
T+ + +A L + V Y +RR A + S L++ M+Y G L L+
Sbjct: 48 TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIH 107
Query: 106 KFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRL 165
D +++ A++ IH +HR D+KP N+ +D + ++++
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQGIIHR----------DLKPMNIFIDESRNVKI 157
Query: 166 ADFG---------SCLRLGGDGTVQSN----VAVGTPDYISPEILTAMEEGRGRYGPECD 212
DFG L+L S+ A+GT Y++ E+L +G G Y + D
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL----DGTGHYNEKID 213
Query: 213 WWSLGVCMYEMLYGETPF 230
+SLG+ +EM+Y PF
Sbjct: 214 MYSLGIIFFEMIY---PF 228
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
DE + R + D + + +R+E + I L + NL LVM++
Sbjct: 31 DEVAVKAARHDPD-EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 97 GGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
GG L +LS R+P D+ + ++ + +HD V + RD+K N+L
Sbjct: 90 GGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAIVP-------IIHRDLKSSNIL 140
Query: 157 LD--------ANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYG 208
+ +N +++ DFG R T S A G +++PE++ A +G
Sbjct: 141 ILQKVENGDLSNKILKITDFGLA-REWHRTTKMS--AAGAYAWMAPEVIRASMFSKG--- 194
Query: 209 PECDWWSLGVCMYEMLYGETPFYA-ESLVETYGKIMNHQNSFDLPS 253
D WS GV ++E+L GE PF + L YG MN + + +PS
Sbjct: 195 --SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN-KLALPIPS 237
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 50 VSDFIEFVA---KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
V++F+ VA +LR VL G A NL +V +Y G L LL K
Sbjct: 78 VNEFLREVAIMKRLRHPNIVLFMG----------AVTQPPNLSIVTEYLSRGSLYRLLHK 127
Query: 107 FEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
R D + + +A ++Y+H N H R++K N+L+D +++
Sbjct: 128 SGAREQLDERR----RLSMAYDVAKGMNYLHNRNPPIVH--RNLKSPNLLVDKKYTVKVC 181
Query: 167 DFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
DFG RL + S A GTP++++PE+L + D +S GV ++E+
Sbjct: 182 DFGLS-RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNE-----KSDVYSFGVILWELATL 235
Query: 227 ETPFYAESLVETYGKIMNHQNSFDLPSDVGYEIS 260
+ P+ + + + ++P ++ +++
Sbjct: 236 QQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 104 LSKFEDRLPED-MAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH 162
L+ + D++PE + I +M+ + D + HR H RD+KP N+L+ ++G
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH------RDLKPQNILVTSSGQ 158
Query: 163 IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
I+LADFG R+ ++V V T Y +PE+L + Y D WS+G E
Sbjct: 159 IKLADFGLA-RIYSFQMALTSVVV-TLWYRAPEVLL-----QSSYATPVDLWSVGCIFAE 211
Query: 223 MLYGETPFYAESLVETYGKIMN---HQNSFDLPSDVGY---EISDDAKDLMRRLICSSDT 276
M + F S V+ GKI++ D P DV + + + + D
Sbjct: 212 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID- 270
Query: 277 RLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
LG++ + ++ + S +HP+FQ +
Sbjct: 271 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 104 LSKFEDRLPED-MAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH 162
L+ + D++PE + I +M+ + D + HR H RD+KP N+L+ ++G
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH------RDLKPQNILVTSSGQ 158
Query: 163 IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
I+LADFG R+ ++V V T Y +PE+L + Y D WS+G E
Sbjct: 159 IKLADFGLA-RIYSFQMALTSVVV-TLWYRAPEVLL-----QSSYATPVDLWSVGCIFAE 211
Query: 223 MLYGETPFYAESLVETYGKIMN 244
M + F S V+ GKI++
Sbjct: 212 MFRRKPLFRGSSDVDQLGKILD 233
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ L LV ++ DL LL E L AK ++ +++ IA HD
Sbjct: 62 IVKLYDVIHTKKRLVLVFEH-LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++ G +++ADFG R G + V T Y +P
Sbjct: 121 VLHR----------DLKPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAP 169
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQNSFD 250
++L G +Y D WS+G EM+ G F A+ L+ + +I+ NS +
Sbjct: 170 DVLM----GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF-RILGTPNSKN 224
Query: 251 LPS 253
P+
Sbjct: 225 WPN 227
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 12/126 (9%)
Query: 105 SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIR 164
S +D +PE++ + +A++ L+++ + N H RDIKP N+LLD +G+I+
Sbjct: 116 SVLDDVIPEEILG------KITLATVKALNHL-KENLKIIH--RDIKPSNILLDRSGNIK 166
Query: 165 LADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
L DFG +L ++ G Y++PE + +G Y D WSLG+ +YE+
Sbjct: 167 LCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELA 223
Query: 225 YGETPF 230
G P+
Sbjct: 224 TGRFPY 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 104 LSKFEDRLPED-MAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH 162
L+ + D++PE + I +M+ + D + HR H RD+KP N+L+ ++G
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVH------RDLKPQNILVTSSGQ 158
Query: 163 IRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
I+LADFG R+ ++V V T Y +PE+L + Y D WS+G E
Sbjct: 159 IKLADFG-LARIYSFQMALTSVVV-TLWYRAPEVLL-----QSSYATPVDLWSVGCIFAE 211
Query: 223 MLYGETPFYAESLVETYGKIMN 244
M + F S V+ GKI++
Sbjct: 212 MFRRKPLFRGSSDVDQLGKILD 233
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 111 LPEDMAKFYIAEMVLAIASIHD-LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
+PED+ +V A+ +H L +HR D+KP NVL++A G +++ DFG
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLSVIHR----------DVKPSNVLINALGQVKMCDFG 155
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
L D V ++ G Y++PE + +G Y + D WSLG+ M E+ P
Sbjct: 156 ISGYLVDD--VAKDIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP 212
Query: 230 FYAESLVETYGKIMNHQNSFDLPSD 254
+ + K + + S LP+D
Sbjct: 213 YDSWGTPFQQLKQVVEEPSPQLPAD 237
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 90 LVMDYYCGGDLLTLLSKFED--RLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L M+Y GGDL L++FE+ L E + ++++ A+ +H+ +HR
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR--------- 145
Query: 148 RDIKPDNVLLDANGHI---RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
D+KP+N++L ++ D G L D VGT Y++PE+L +
Sbjct: 146 -DLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLE-----Q 197
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHQN 247
+Y D+WS G +E + G PF V+ +GK+ N
Sbjct: 198 KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN 241
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 90 LVMDYYCGGDLLTLLSKFED--RLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L M+Y GGDL L++FE+ L E + ++++ A+ +H+ +HR
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR--------- 146
Query: 148 RDIKPDNVLLDANGHI---RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
D+KP+N++L ++ D G L D VGT Y++PE+L +
Sbjct: 147 -DLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLE-----Q 198
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHQN 247
+Y D+WS G +E + G PF V+ +GK+ N
Sbjct: 199 KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN 242
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 70 GDRRWITNLHYAF--QDDSNLYL-VMDYYCGGDLLTLLSKF---EDRLPEDMAKFYIAEM 123
G + N H + N YL V+ Y L +L F +P ++ YI ++
Sbjct: 91 GKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQL 150
Query: 124 VLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH-IRLADFGSCLRLGGDGTVQS 182
A+ IH L HR DIKP N+L+++ + ++L DFGS +L + S
Sbjct: 151 FRAVGFIHSLGICHR----------DIKPQNLLVNSKDNTLKLCDFGSAKKL--IPSEPS 198
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
+ + Y +PE++ E Y P D WS+G E++ G+ F E+ ++ +I
Sbjct: 199 VAXICSRFYRAPELMLGATE----YTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRI 254
Query: 243 M 243
+
Sbjct: 255 I 255
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 71 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G ++ V T
Sbjct: 126 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 174
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 175 WYRAPEILL----GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G ++ V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I +L + L LV ++ DL +L + + L + K Y+ +++ +A H
Sbjct: 81 IVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++++G ++LADFG R G V T Y +P
Sbjct: 140 ILHR----------DLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAP 188
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
++L G +Y D WS+G EM+ G+ F
Sbjct: 189 DVLM----GSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I +L + L LV ++ DL +L + + L + K Y+ +++ +A H
Sbjct: 81 IVSLIDVIHSERCLTLVFEF-MEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++++G ++LADFG R G V T Y +P
Sbjct: 140 ILHR----------DLKPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAP 188
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
++L G +Y D WS+G EM+ G+ F
Sbjct: 189 DVLM----GSKKYSTSVDIWSIGCIFAEMITGKPLF 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI-HDLHYVHRPNHFAF 144
+++YLV D+ C DL LLS + KF ++E+ + + + L+Y+HR N
Sbjct: 98 ASIYLVFDF-CEHDLAGLLSNV-------LVKFTLSEIKRVMQMLLNGLYYIHR-NKI-- 146
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV---AVGTPDYISPEILTAME 201
L RD+K NVL+ +G ++LADFG Q N V T Y PE+L
Sbjct: 147 -LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL--- 202
Query: 202 EGRGRYGPECDWWSLGVCMYEM 223
G YGP D W G M EM
Sbjct: 203 -GERDYGPPIDLWGAGCIMAEM 223
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI-HDLHYVHRPNHFAFH 145
++YLV D+ C DL LLS + KF ++E+ + + + L+Y+HR N
Sbjct: 99 SIYLVFDF-CEHDLAGLLSNV-------LVKFTLSEIKRVMQMLLNGLYYIHR-NKI--- 146
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV---AVGTPDYISPEILTAMEE 202
L RD+K NVL+ +G ++LADFG Q N V T Y PE+L
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL---- 202
Query: 203 GRGRYGPECDWWSLGVCMYEM 223
G YGP D W G M EM
Sbjct: 203 GERDYGPPIDLWGAGCIMAEM 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 111 LPEDMAKFYIAEMVLAIASIHD-LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
+PED+ +V A+ +H L +HR D+KP NVL++A G +++ DFG
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLSVIHR----------DVKPSNVLINALGQVKMCDFG 199
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
L +V + G Y++PE + +G Y + D WSLG+ M E+ P
Sbjct: 200 ISGYLV--DSVAKTIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP 256
Query: 230 FYAESLVETYGKIMNHQNSFDLPSD 254
+ + K + + S LP+D
Sbjct: 257 YDSWGTPFQQLKQVVEEPSPQLPAD 281
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 33/198 (16%)
Query: 49 TVSDFIEFVAKLREERDVLVYG---DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLS 105
T+ + +A L + V Y +RR A + S L++ M+Y L L+
Sbjct: 48 TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIH 107
Query: 106 KFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRL 165
D +++ A++ IH +HR D+KP N+ +D + ++++
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQGIIHR----------DLKPMNIFIDESRNVKI 157
Query: 166 ADFG---------SCLRLGGDGTVQSN----VAVGTPDYISPEILTAMEEGRGRYGPECD 212
DFG L+L S+ A+GT Y++ E+L +G G Y + D
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL----DGTGHYNEKID 213
Query: 213 WWSLGVCMYEMLYGETPF 230
+SLG+ +EM+Y PF
Sbjct: 214 MYSLGIIFFEMIY---PF 228
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI-HDLHYVHRPNHFAFH 145
++YLV D+ C DL LLS + KF ++E+ + + + L+Y+HR N
Sbjct: 98 SIYLVFDF-CEHDLAGLLSNV-------LVKFTLSEIKRVMQMLLNGLYYIHR-NKI--- 145
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV---AVGTPDYISPEILTAMEE 202
L RD+K NVL+ +G ++LADFG Q N V T Y PE+L
Sbjct: 146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL---- 201
Query: 203 GRGRYGPECDWWSLGVCMYEM 223
G YGP D W G M EM
Sbjct: 202 GERDYGPPIDLWGAGCIMAEM 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I LH + +L LV +Y DL L + + K ++ +++ +A H
Sbjct: 62 IVTLHDIIHTEKSLTLVFEY-LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++ G ++LADFG R T + V T Y P
Sbjct: 121 VLHR----------DLKPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVVTLWYRPP 169
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 237
+IL G Y + D W +G YEM G P + S VE
Sbjct: 170 DILL----GSTDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVE 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 65 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G ++ V T
Sbjct: 120 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 168
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 169 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 71 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G ++ V T
Sbjct: 126 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 174
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 175 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 67/141 (47%), Gaps = 20/141 (14%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI-HDLHYVHRPNHFAFH 145
++YLV D+ C DL LLS + KF ++E+ + + + L+Y+HR N
Sbjct: 99 SIYLVFDF-CEHDLAGLLSNV-------LVKFTLSEIKRVMQMLLNGLYYIHR-NKI--- 146
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV---AVGTPDYISPEILTAMEE 202
L RD+K NVL+ +G ++LADFG Q N V T Y PE+L
Sbjct: 147 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLL---- 202
Query: 203 GRGRYGPECDWWSLGVCMYEM 223
G YGP D W G M EM
Sbjct: 203 GERDYGPPIDLWGAGCIMAEM 223
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G ++ V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 63 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G ++ V T
Sbjct: 118 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 167 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 63 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G ++ V T
Sbjct: 118 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 167 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
L++ M++ G TL E R E + K E+ I D Y+H +
Sbjct: 95 LFIQMEFCDKG---TLEQWIEKRRGEKLDKVLALELFEQITKGVD--YIHSKKL----IN 145
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+KP N+ L +++ DFG L DG + + GT Y+SPE +++ + Y
Sbjct: 146 RDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRXRSKGTLRYMSPEQISSQD-----Y 198
Query: 208 GPECDWWSLGVCMYEMLY 225
G E D ++LG+ + E+L+
Sbjct: 199 GKEVDLYALGLILAELLH 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 68 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G ++ V T
Sbjct: 123 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 171
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 172 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G ++ V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 183 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 63 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G ++ V T
Sbjct: 118 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 167 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G ++ V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 25/181 (13%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 67 IVKLLDVIHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP+N+L++ G I+LADFG G + V T
Sbjct: 122 CHSHRVLHR----------DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y +PEIL G Y D WSLG EM+ F +S ++ +I +
Sbjct: 171 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 250 D 250
D
Sbjct: 227 D 227
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS----IHDLHYVHRPNHFA 143
L++ M++ G TL E R E + K E+ I IH +HR
Sbjct: 109 LFIQMEFCDKG---TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHR----- 160
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEG 203
D+KP N+ L +++ DFG L DG + + GT Y+SPE +++ +
Sbjct: 161 -----DLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQD-- 211
Query: 204 RGRYGPECDWWSLGVCMYEMLY 225
YG E D ++LG+ + E+L+
Sbjct: 212 ---YGKEVDLYALGLILAELLH 230
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 65 IVKLLDVIHTENKLYLVFEF-----LSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP+N+L++ G I+LADFG G + V T
Sbjct: 120 CHS----HRVLH------RDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 169 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 65 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP+N+L++ G I+LADFG G + V T
Sbjct: 120 CHSHRVLHR----------DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 169 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 66 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP+N+L++ G I+LADFG G + V T
Sbjct: 121 CHSHRVLHR----------DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 170 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I++ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M++ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDATLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+GV M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I LH D L LV ++ C DL L ++ K ++ +++ + H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++ NG ++LADFG R G + V T Y P
Sbjct: 122 VLHR----------DLKPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVVTLWYRPP 170
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
++L G Y D WS G E+ P +
Sbjct: 171 DVLF----GAKLYSTSIDMWSAGCIFAELANAARPLF 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G + V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
I L ++ LYLV ++ DL T + + +P + K Y+ +++ +A H
Sbjct: 63 IVKLLDVIHTENKLYLVFEH-VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
+HR D+KP N+L++ G I+LADFG G ++ V T Y +
Sbjct: 122 RVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRA 170
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 171 PEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 154 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 201
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 202 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G + V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 31/198 (15%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+C +R E ++ + A L R V +YG A ++ + + M+ G
Sbjct: 120 QCAVKKVRLEVFRAEELMACAGLTSPRIVPLYG----------AVREGPWVNIFMELLEG 169
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
G L L+ K + LPED A +Y+ + + + +H +H D+K DNVLL
Sbjct: 170 GSLGQLV-KEQGCLPEDRALYYLGQALEGLEYLHSRRILH----------GDVKADNVLL 218
Query: 158 DANG-HIRLADFGSCLRLGGDGTVQS----NVAVGTPDYISPEILTAMEEGRGRYGPECD 212
++G H L DFG + L DG +S + GT +++PE++ GR + D
Sbjct: 219 SSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL----GRS-CDAKVD 273
Query: 213 WWSLGVCMYEMLYGETPF 230
WS M ML G P+
Sbjct: 274 VWSSCCMMLHMLNGCHPW 291
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 143 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 190
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 191 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 147 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 194
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 195 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 67 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 122 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 171 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 66 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 121 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 170 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 63 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G + V T
Sbjct: 118 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 166
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 167 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 183 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 136 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 183
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 184 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 147 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 194
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 195 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 63 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G + V T
Sbjct: 118 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 166
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 167 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 67 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 122 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 171 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 66 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 121 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 170 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 65 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 120 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 169 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 183 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 65 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 120 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 169 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 119 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 68 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 123 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 171
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y +PEIL G Y D WSLG EM+ F +S ++ +I +
Sbjct: 172 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 250 D 250
D
Sbjct: 228 D 228
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H HR H RD+KP N+L++ G I+LADFG G + V T
Sbjct: 119 CHS----HRVLH------RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 139 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 186
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 187 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 169 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 216
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 217 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L KF D +P + K Y+ +++ ++
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G ++ V T
Sbjct: 119 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 181
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 182 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 181
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 182 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 148 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 194
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 195 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 181
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 182 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 163 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 209
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 210 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDL 133
I L ++ LYLV ++ DL T + + +P + K Y+ +++ +A H
Sbjct: 67 IVKLLDVIHTENKLYLVFEF-LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 134 HYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS 193
+HR D+KP N+L++ G I+LADFG G + V T Y +
Sbjct: 126 RVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 175 PEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 173 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 219
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 220 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 171 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 217
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 218 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 169 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 215
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 216 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 140 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 186
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 187 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D+ L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVA 185
+A IH HR DIKP N+LLD + + +L DFGS +L + NV+
Sbjct: 214 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVS 260
Query: 186 -VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 261 YICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M++ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDATLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+GV M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 31/198 (15%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+C +R E ++ + A L R V +YG A ++ + + M+ G
Sbjct: 101 QCAVKKVRLEVFRAEELMACAGLTSPRIVPLYG----------AVREGPWVNIFMELLEG 150
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
G L L+ K + LPED A +Y+ + + + +H +H D+K DNVLL
Sbjct: 151 GSLGQLV-KEQGCLPEDRALYYLGQALEGLEYLHSRRILH----------GDVKADNVLL 199
Query: 158 DANG-HIRLADFGSCLRLGGDG----TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECD 212
++G H L DFG + L DG + + GT +++PE++ GR + D
Sbjct: 200 SSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL----GRS-CDAKVD 254
Query: 213 WWSLGVCMYEMLYGETPF 230
WS M ML G P+
Sbjct: 255 VWSSCCMMLHMLNGCHPW 272
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPED 114
E + +E V+ + L D +L LV Y G LL LS + P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 115 MAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRL 174
+ +A + + ++++H NH H+ RDIK N+LLD +++DFG L
Sbjct: 132 ----WHMRCKIAQGAANGINFLHE-NH---HIHRDIKSANILLDEAFTAKISDFG--LAR 181
Query: 175 GGDG---TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
+ TV + VGT Y++PE L RG P+ D +S GV + E++ G
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKS--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG C + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 14/145 (9%)
Query: 111 LPEDMAKFYIAEMVLAIASIHD-LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
+PED+ +V A+ +H L +HR D+KP NVL++A G ++ DFG
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLSVIHR----------DVKPSNVLINALGQVKXCDFG 182
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
L D V ++ G Y +PE + +G Y + D WSLG+ E+ P
Sbjct: 183 ISGYLVDD--VAKDIDAGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFP 239
Query: 230 FYAESLVETYGKIMNHQNSFDLPSD 254
+ + K + + S LP+D
Sbjct: 240 YDSWGTPFQQLKQVVEEPSPQLPAD 264
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ +D S +YLV G DL ++ L ++ +F + +++ + IH +HR
Sbjct: 101 SIEDFSEVYLVTTL-MGADLNNIVKS--QALSDEHVQFLVYQLLRGLKYIHSAGIIHR-- 155
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP NV ++ + +R+ DFG L + V T Y +PEI+
Sbjct: 156 --------DLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVATRWYRAPEIML-- 201
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
Y D WS+G M E+L G+ F ++ +IM
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAI--ASIHDLHYVHRPNHFAFHL 146
+L++ C G L+ L K E R P + VL I + + ++HR H
Sbjct: 109 FLLLTELCKGQLVEFLKKMESRGP------LSCDTVLKIFYQTCRAVQHMHRQKPPIIH- 161
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLG----------GDGTVQSNVAVG-TPDYISPE 195
RD+K +N+LL G I+L DFGS + V+ + TP Y +PE
Sbjct: 162 -RDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
I+ G + D W+LG +Y + + + PF
Sbjct: 221 IIDLY--SNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L KF D +P + K Y+ +++ +A
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQD-----LKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 122 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 171 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I LH D L LV ++ C DL L ++ K ++ +++ + H +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISP 194
+HR D+KP N+L++ NG ++LA+FG R G + V T Y P
Sbjct: 122 VLHR----------DLKPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVVTLWYRPP 170
Query: 195 EILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
++L G Y D WS G E+ P +
Sbjct: 171 DVLF----GAKLYSTSIDMWSAGCIFAELANAGRPLF 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 75 ITNLHYAF------QDDSNLYLVMDYYCGG--DLLTLLSKFEDRLPEDMAKFYIAEMVLA 126
I L Y F +D L LV+DY + S+ + LP K Y+ ++ +
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 127 IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRL-GGDGTVQSNV 184
+A IH HR DIKP N+LLD + + +L DFGS +L G+ V
Sbjct: 135 LAYIHSFGICHR----------DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-- 182
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ + Y +PE++ G Y D WS G + E+L G+ F +S V+ +I+
Sbjct: 183 -ICSRYYRAPELIF----GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPED 114
E + +E V+ + L D +L LV Y G LL LS + P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 115 MAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRL 174
+ +A + + ++++H NH H+ RDIK N+LLD +++DFG L
Sbjct: 132 ----WHMRCKIAQGAANGINFLHE-NH---HIHRDIKSANILLDEAFTAKISDFG--LAR 181
Query: 175 GGDG---TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
+ TV VGT Y++PE L RG P+ D +S GV + E++ G
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 230
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L F D +P + K Y+ +++ +A
Sbjct: 64 IVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP+N+L++ G I+LADFG G + V T
Sbjct: 119 CHSHRVLHR----------DLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 168 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 23/153 (15%)
Query: 89 YLVMDYYCGGDLLTLLSKFEDR---LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+L++ ++ G L + + +D+ L ED + + + + +IH Y HR
Sbjct: 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHR------- 158
Query: 146 LCRDIKPDNVLLDANGHIRLADFGS----CLRLGGDG---TVQSNVAVG-TPDYISPEIL 197
D+KP N+LL G L D GS C+ + G T+Q A T Y +PE+
Sbjct: 159 ---DLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215
Query: 198 TAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+ + D WSLG +Y M++GE P+
Sbjct: 216 SV--QSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ +D S +YLV G DL ++ L ++ +F + +++ + IH +HR
Sbjct: 101 SIEDFSEVYLVTTL-MGADLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHSAGIIHR-- 155
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP NV ++ + +R+ DFG L + V T Y +PEI+
Sbjct: 156 --------DLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVATRWYRAPEIML-- 201
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
Y D WS+G M E+L G+ F ++ +IM
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 75/181 (41%), Gaps = 25/181 (13%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L F D +P + K Y+ +++ +A
Sbjct: 67 IVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 122 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF 249
Y +PEIL G Y D WSLG EM+ F +S ++ +I +
Sbjct: 171 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 250 D 250
D
Sbjct: 227 D 227
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 25/173 (14%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR-----LPEDMAKFYIAEMVLAIAS 129
I L ++ LYLV ++ L L F D +P + K Y+ +++ +A
Sbjct: 66 IVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
H +HR D+KP N+L++ G I+LADFG G + V T
Sbjct: 121 CHSHRVLHR----------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
Y +PEIL G Y D WSLG EM+ F +S ++ +I
Sbjct: 170 WYRAPEILL----GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 17/125 (13%)
Query: 112 PEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL-DANGHIRLADFGS 170
P + K ++ +++ +I +H P+ H RDIKP NVL+ +A+G ++L DFGS
Sbjct: 127 PPILIKVFLFQLIRSIGCLH------LPSVNVCH--RDIKPHNVLVNEADGTLKLCDFGS 178
Query: 171 CLRLGGDGTVQSNVA-VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
+L + NVA + + Y +PE++ G Y D WS+G EM+ GE
Sbjct: 179 AKKLSPS---EPNVAYICSRYYRAPELIF----GNQHYTTAVDIWSVGCIFAEMMLGEPI 231
Query: 230 FYAES 234
F ++
Sbjct: 232 FRGDN 236
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M++ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDATLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGM-----G 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ +D S +YLV G DL ++ L ++ +F + +++ + IH +HR
Sbjct: 93 SIEDFSEVYLVTTL-MGADLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHSAGIIHR-- 147
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP NV ++ + +R+ DFG L + V T Y +PEI+
Sbjct: 148 --------DLKPSNVAVNEDCELRILDFG----LARQADEEMTGYVATRWYRAPEIML-- 193
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
Y D WS+G M E+L G+ F ++ +IM
Sbjct: 194 --NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPED 114
E + +E V+ + L D +L LV Y G LL LS + P
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 115 MAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRL 174
+ +A + + ++++H NH H+ RDIK N+LLD +++DFG L
Sbjct: 126 ----WHMRCKIAQGAANGINFLHE-NH---HIHRDIKSANILLDEAFTAKISDFG--LAR 175
Query: 175 GGDGTVQSNVA---VGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
+ Q + VGT Y++PE L RG P+ D +S GV + E++ G
Sbjct: 176 ASEKFAQXVMXXRIVGTTAYMAPEAL------RGEITPKSDIYSFGVVLLEIITG 224
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 33/198 (16%)
Query: 49 TVSDFIEFVAKLREERDVLVYG---DRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLS 105
T+ + +A L + V Y +RR A + S L++ +Y L L+
Sbjct: 48 TILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH 107
Query: 106 KFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRL 165
D +++ A++ IH +HR ++KP N+ +D + ++++
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHSQGIIHR----------NLKPXNIFIDESRNVKI 157
Query: 166 ADFG---------SCLRLGGDGTVQSN----VAVGTPDYISPEILTAMEEGRGRYGPECD 212
DFG L+L S+ A+GT Y++ E+L +G G Y + D
Sbjct: 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL----DGTGHYNEKID 213
Query: 213 WWSLGVCMYEMLYGETPF 230
+SLG+ +E +Y PF
Sbjct: 214 XYSLGIIFFEXIY---PF 228
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ A ++ + + M+ GG L L+ + LPED A +Y+ + + + +H
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR 184
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANG-HIRLADFGSCLRLGGDGTVQS----NVAVGTP 189
+H D+K DNVLL ++G L DFG L L DG +S + GT
Sbjct: 185 ILH----------GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 234
Query: 190 DYISPEILTAMEEGRGRYGPECDW----WSLGVCMYEMLYGETPF 230
+++PE++ G CD WS M ML G P+
Sbjct: 235 THMAPEVVM---------GKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ A ++ + + M+ GG L L+ + LPED A +Y+ + + + +H
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR 170
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANG-HIRLADFGSCLRLGGDGTVQS----NVAVGTP 189
+H D+K DNVLL ++G L DFG L L DG +S + GT
Sbjct: 171 ILH----------GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 220
Query: 190 DYISPEILTAMEEGRGRYGPECDW----WSLGVCMYEMLYGETPF 230
+++PE++ G CD WS M ML G P+
Sbjct: 221 THMAPEVV---------MGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I L+ A ++ + + M+ GG L L+ + LPED A +Y+ + + + +H
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRR 186
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANG-HIRLADFGSCLRLGGDGTVQS----NVAVGTP 189
+H D+K DNVLL ++G L DFG L L DG +S + GT
Sbjct: 187 ILH----------GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 236
Query: 190 DYISPEILTAMEEGRGRYGPECDW----WSLGVCMYEMLYGETPF 230
+++PE++ G CD WS M ML G P+
Sbjct: 237 THMAPEVV---------MGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 69 YGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIA 128
+ D R L Y + ++ NL + G DL T+ +E RL + I
Sbjct: 103 FCDERNEMILIYKYMENGNL---KRHLYGSDLPTMSMSWEQRLE------------ICIG 147
Query: 129 SIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLR-LGGDGTVQSNVAVG 187
+ LHY+H H RD+K N+LLD N ++ DFG + D T V G
Sbjct: 148 AARGLHYLH--TRAIIH--RDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 188 TPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
T YI PE +GR + D +S GV ++E+L
Sbjct: 204 TLGYIDPEYFI-----KGRLTEKSDVYSFGVVLFEVL 235
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
D +L LV Y G LL LS + P + +A + + ++++H NH
Sbjct: 92 DGDDLCLVYVYXPNGSLLDRLSCLDGTPPLS----WHXRCKIAQGAANGINFLHE-NH-- 144
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ---SNVAVGTPDYISPEILTAM 200
H+ RDIK N+LLD +++DFG L + Q + VGT Y +PE L
Sbjct: 145 -HIHRDIKSANILLDEAFTAKISDFG--LARASEKFAQXVXXSRIVGTTAYXAPEAL--- 198
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYG 226
RG P+ D +S GV + E++ G
Sbjct: 199 ---RGEITPKSDIYSFGVVLLEIITG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDATLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDATLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGM-----G 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 69 YGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIA 128
+ D R L Y + ++ NL + G DL T+ +E RL + I
Sbjct: 103 FCDERNEMILIYKYMENGNL---KRHLYGSDLPTMSMSWEQRLE------------ICIG 147
Query: 129 SIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ-SNVAVG 187
+ LHY+H H RD+K N+LLD N ++ DFG + G V G
Sbjct: 148 AARGLHYLH--TRAIIH--RDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 188 TPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
T YI PE +GR + D +S GV ++E+L
Sbjct: 204 TLGYIDPEYFI-----KGRLTEKSDVYSFGVVLFEVL 235
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHR----------DIKDENILIDLNRGELKLIDFG 156
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 157 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 209
Query: 230 F 230
F
Sbjct: 210 F 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR------ 135
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 136 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFR---- 187
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 188 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 16 IQGKGRVFSIETLLDILLVLYDECCN-SSLRREKTVSDFIEFVAKLREERDVLVYGDRRW 74
+ GKG E L+ + L Y ++RR + E V L+ E V +
Sbjct: 32 VIGKG----FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPN 87
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVL-AIASIHD 132
I F D+ L++V + G L+ + F D + E +A YI + VL A+ IH
Sbjct: 88 IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE-LAIAYILQGVLKALDYIHH 146
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV------AV 186
+ YVH R +K ++L+ +G + L+ S L + G Q V +V
Sbjct: 147 MGYVH----------RSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
++SPE+L +G Y + D +S+G+ E+ G PF
Sbjct: 197 KVLPWLSPEVLQQNLQG---YDAKSDIYSVGITACELANGHVPF 237
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 16 IQGKGRVFSIETLLDILLVLYDECCN-SSLRREKTVSDFIEFVAKLREERDVLVYGDRRW 74
+ GKG E L+ + L Y ++RR + E V L+ E V +
Sbjct: 16 VIGKG----FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPN 71
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVL-AIASIHD 132
I F D+ L++V + G L+ + F D + E +A YI + VL A+ IH
Sbjct: 72 IVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE-LAIAYILQGVLKALDYIHH 130
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV------AV 186
+ YVH R +K ++L+ +G + L+ S L + G Q V +V
Sbjct: 131 MGYVH----------RSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 180
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
++SPE+L +G Y + D +S+G+ E+ G PF
Sbjct: 181 KVLPWLSPEVLQQNLQG---YDAKSDIYSVGITACELANGHVPF 221
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 160 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 212
Query: 230 F 230
F
Sbjct: 213 F 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 160
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 161 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 213
Query: 230 F 230
F
Sbjct: 214 F 214
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 156
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 157 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 209
Query: 230 F 230
F
Sbjct: 210 F 210
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 87/219 (39%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG G + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV--TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 156
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 157 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 209
Query: 230 F 230
F
Sbjct: 210 F 210
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 160
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 161 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 213
Query: 230 F 230
F
Sbjct: 214 F 214
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI-LTA 199
D+KP N+ ++ + +++ DFG + T V T Y +PEI L A
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIMLNA 197
Query: 200 MEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
M Y D WS+G M E+L G T F
Sbjct: 198 MH-----YNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 161
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 162 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 214
Query: 230 F 230
F
Sbjct: 215 F 215
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 161
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 162 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 214
Query: 230 F 230
F
Sbjct: 215 F 215
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR--LP 112
E + KL + V ++ T H L+M++ G L T+L + + LP
Sbjct: 59 EVLKKLNHKNIVKLFAIEEETTTRHKV--------LIMEFCPCGSLYTVLEEPSNAYGLP 110
Query: 113 EDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL----DANGHIRLADF 168
E + ++V + + + VHR +IKP N++ D +L DF
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHR----------NIKPGNIMRVIGEDGQSVYKLTDF 160
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEI---LTAMEEGRGRYGPECDWWSLGVCMYEMLY 225
G+ L D S GT +Y+ P++ ++ + +YG D WS+GV Y
Sbjct: 161 GAARELEDDEQFVS--LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
Query: 226 GETPF 230
G PF
Sbjct: 219 GSLPF 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 53 FIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLP 112
F VA LR+ R V + L + NL +V + G L L E
Sbjct: 79 FRNEVAVLRKTRHVNIL--------LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQE---- 126
Query: 113 EDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG-S 170
KF + +++ +A + + Y+H N + RD+K +N+ L +++ DFG +
Sbjct: 127 ---TKFQMFQLIDIARQTAQGMDYLHAKNI----IHRDMKSNNIFLHEGLTVKIGDFGLA 179
Query: 171 CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
++ G+ Q G+ +++PE++ + + + D +S G+ +YE++ GE P+
Sbjct: 180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP--FSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 22/158 (13%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+ YLVM + DL ++ + E+ ++ + +M+ + IH VHR
Sbjct: 103 DFYLVMPF-MQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSAGVVHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+ ++ + +++ DFG L + V T Y +PE++ +
Sbjct: 151 --DLKPGNLAVNEDCELKILDFG----LARHADAEMTGYVVTRWYRAPEVILSW----MH 200
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
Y D WS+G M EML G+T F + ++ +I+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDXTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 40 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 99
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 100 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 151
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 152 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGM-----G 202
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 203 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 241
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 183
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 184 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 236
Query: 230 F 230
F
Sbjct: 237 F 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDXTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 92 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHR-------- 143
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 144 --DLKPSNIVVKSDXTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 194
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 203
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 204 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 256
Query: 230 F 230
F
Sbjct: 257 F 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 161
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 162 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 214
Query: 230 F 230
F
Sbjct: 215 F 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDXTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 189
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 190 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 242
Query: 230 F 230
F
Sbjct: 243 F 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 203
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 204 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 256
Query: 230 F 230
F
Sbjct: 257 F 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 188
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 189 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 241
Query: 230 F 230
F
Sbjct: 242 F 242
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKX--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDXELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 175
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 176 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 228
Query: 230 F 230
F
Sbjct: 229 F 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 176
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 177 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 229
Query: 230 F 230
F
Sbjct: 230 F 230
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 189
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 190 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 242
Query: 230 F 230
F
Sbjct: 243 F 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 188
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 189 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 241
Query: 230 F 230
F
Sbjct: 242 F 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 176
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 177 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 229
Query: 230 F 230
F
Sbjct: 230 F 230
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 176
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 177 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 229
Query: 230 F 230
F
Sbjct: 230 F 230
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 188
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 189 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 241
Query: 230 F 230
F
Sbjct: 242 F 242
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 188
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 189 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 241
Query: 230 F 230
F
Sbjct: 242 F 242
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 175
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 176 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 228
Query: 230 F 230
F
Sbjct: 229 F 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 189
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 190 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 242
Query: 230 F 230
F
Sbjct: 243 F 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 189
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 190 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 242
Query: 230 F 230
F
Sbjct: 243 F 243
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGM-----G 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 195
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 196 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 248
Query: 230 F 230
F
Sbjct: 249 F 249
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDXTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 203
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 204 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 256
Query: 230 F 230
F
Sbjct: 257 F 257
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 111 LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFG 169
L E++A+ + +++ A+ H+ +HR DIK +N+L+D N G ++L DFG
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHR----------DIKDENILIDLNRGELKLIDFG 208
Query: 170 SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP 229
S L TV ++ GT Y PE + +G WSLG+ +Y+M+ G+ P
Sbjct: 209 SGALL--KDTVYTDFD-GTRVYSPPEWIRYHR----YHGRSAAVWSLGILLYDMVCGDIP 261
Query: 230 F 230
F
Sbjct: 262 F 262
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 41 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 100
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 101 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 152
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + V T Y +PE++ M
Sbjct: 153 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMVPFVV-TRYYRAPEVILGMG----- 203
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ G F ++ + K++
Sbjct: 204 YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 19/175 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E ++ D +I L Q ++ L LVM+ GG L L + +P
Sbjct: 56 EMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 114
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
+ ++ + + + + ++VHR D+ NVLL + +++DFG LG D
Sbjct: 115 LLHQVSMGMKYLEEKNFVHR----------DLAARNVLLVNRHYAKISDFGLSKALGADD 164
Query: 179 TVQSNVAVGT--PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
+ + + G + +PE + ++ D WS GV M+E L YG+ P+
Sbjct: 165 SYYTARSAGKWPLKWYAPECINFR-----KFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 135
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 136 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 188 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 85 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 138
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 139 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 190
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 191 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 231 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL 279
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 280 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 325
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 326 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 379
Query: 228 TPF 230
P+
Sbjct: 380 VPY 382
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 79 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 132
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 133 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 184
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 185 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR------ 515
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEG 203
DI NVL+ +N ++L DFG R D T P +++PE +
Sbjct: 516 ----DIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAPESINFR--- 567
Query: 204 RGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 568 --RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 135
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 136 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 188 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 231 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL 279
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 280 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 325
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 326 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 379
Query: 228 TPF 230
P+
Sbjct: 380 VPY 382
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 38 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 97
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 98 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 149
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 150 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 200
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 201 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 144
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 145 --DLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 195
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 151
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 152 --DLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 202
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG G ++ V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGM-----G 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 87 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 140
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 141 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 192
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 193 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 40/184 (21%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED----R 110
+ + KLR E+ V +Y A + +Y+V +Y G LL L K E R
Sbjct: 314 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFL-KGETGKYLR 361
Query: 111 LPE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADF 168
LP+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADF
Sbjct: 362 LPQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADF 407
Query: 169 GSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYG 226
G RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 408 G-LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKG 461
Query: 227 ETPF 230
P+
Sbjct: 462 RVPY 465
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 84 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 137
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 138 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 189
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 190 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 229
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 91
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 92 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 143
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 144 --DLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 194
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKX--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 92
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 93 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 144
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 145 --DLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 195
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 196 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 99
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 100 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 151
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 152 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 202
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 203 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR--LP 112
E + KL + V ++ T H L+M++ G L T+L + + LP
Sbjct: 59 EVLKKLNHKNIVKLFAIEEETTTRHKV--------LIMEFCPCGSLYTVLEEPSNAYGLP 110
Query: 113 EDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL----DANGHIRLADF 168
E + ++V + + + VHR +IKP N++ D +L DF
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHR----------NIKPGNIMRVIGEDGQSVYKLTDF 160
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEI---LTAMEEGRGRYGPECDWWSLGVCMYEMLY 225
G+ L D Q GT +Y+ P++ ++ + +YG D WS+GV Y
Sbjct: 161 GAARELEDDE--QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
Query: 226 GETPF 230
G PF
Sbjct: 219 GSLPF 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 101 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 155
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 156 --------DLKPSNLAVNEDSELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 201
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 110 ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHR------ 163
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ +N ++L DFG + +++ +++PE +
Sbjct: 164 ----DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 215
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 216 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 98
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 99 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 150
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG G ++ V T Y +PE++ M
Sbjct: 151 --DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYYRAPEVILGMG----- 201
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 188
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 189 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 239
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 102 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 156
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 157 --------DLKPSNLAVNEDCELKILDFGLARHTADEMTGY----VATRWYRAPEIML-- 202
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 22/158 (13%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+ YLVM + DL ++ E+ ++ + +M+ + IH VHR
Sbjct: 121 DFYLVMPF-MQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSAGVVHR-------- 168
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+ ++ + +++ DFG L + V T Y +PE++ +
Sbjct: 169 --DLKPGNLAVNEDCELKILDFG----LARHADAEMTGYVVTRWYRAPEVILSW----MH 218
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
Y D WS+G M EML G+T F + ++ +I+
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILK 256
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD + ++ +K F R R++++ + + I +L F L
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL 136
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 137 EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 188
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 189 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 239
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 97 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 151
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 152 --------DLKPSNLAVNEDSELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 197
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 90 LVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVH----RPNHFAFH 145
LVM+YY G L LS +++ LA + L Y+H R +H+
Sbjct: 89 LVMEYYPNGSLXKYLSLH--------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA 140
Query: 146 LC-RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTV----QSNVA---VGTPDYISPEIL 197
+ RD+ NVL+ +G ++DFG +RL G+ V + N A VGT Y++PE+L
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200
Query: 198 TAMEEGRGRYG--PECDWWSLGVCMYEMLYGETPFYAESLVETY 239
R + D ++LG+ +E+ T + V Y
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 102 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 156
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 157 --------DLKPSNLAVNEDCELKILDFGLARHTADEMTGY----VATRWYRAPEIML-- 202
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 102 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 156
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 157 --------DLKPSNLAVNEDCELKILDFGLARHTADEMTGY----VATRWYRAPEIML-- 202
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+VM+Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVH RD++ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVH----------RDLRAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 LA-RLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V++Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 -LARLIEDNEXTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 124 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 178
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 179 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 224
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D WS+G M E+L G T F + +IM
Sbjct: 225 --NWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIM 265
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 100 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 154
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 155 --------DLKPSNLAVNEDXELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 200
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 41 NSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL 100
NS+ KT+ V EE +++ + L+ + +Y++ +Y G L
Sbjct: 36 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
Query: 101 LTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD-LHYVHRPNHFAFHLCRDIKPDNVLLDA 159
L L E K + +++ A I + + Y+ R N+ + RD++ NVL+
Sbjct: 96 LDFLKSDEG------GKVLLPKLIDFSAQIAEGMAYIERKNY----IHRDLRAANVLVSE 145
Query: 160 NGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGV 218
+ ++ADFG R+ D + P + +PE + G + + D WS G+
Sbjct: 146 SLMCKIADFG-LARVIEDNEYTAREGAKFPIKWTAPEAINF-----GCFTIKSDVWSFGI 199
Query: 219 CMYEML-YGETPF 230
+YE++ YG+ P+
Sbjct: 200 LLYEIVTYGKIPY 212
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGXVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +R+ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 100 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 154
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 155 --------DLKPSNLAVNEDXELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 200
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 44 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 103
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 104 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 155
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 156 --DLKPSNIVVKSDCTLKILDFG-LARTAGTSFMMTPYVV-TRYYRAPEVILGMG----- 206
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 207 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V++Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLSKFEDR---LPE--DMAKFYIAEMVLAIASIHDLH 134
YA + +Y+V +Y G LL L E R LP DMA A++ +A I ++
Sbjct: 70 YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMA----AQVAAGMAYIERMN 125
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVAVGTP-DYI 192
Y+HR D++ N+L+ NG I ++ADFG RL D + P +
Sbjct: 126 YIHR----------DLRSANILV-GNGLICKIADFGLA-RLIEDNEXTARQGAKFPIKWT 173
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
+PE GR+ + D WS G+ + E++ G P+
Sbjct: 174 APEAALY-----GRFTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
++ +++M+ Y G+L L + ++ L Y ++ A+A + ++ VH
Sbjct: 95 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH------ 148
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEG 203
RDI N+L+ + ++L DFG + + +++V ++SPE +
Sbjct: 149 ----RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR--- 201
Query: 204 RGRYGPECDWWSLGVCMYEML-YGETPFY 231
R+ D W VCM+E+L +G+ PF+
Sbjct: 202 --RFTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
++ +++M+ Y G+L L + ++ L Y ++ A+A + ++ VH
Sbjct: 79 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH------ 132
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEG 203
RDI N+L+ + ++L DFG + + +++V ++SPE +
Sbjct: 133 ----RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR--- 185
Query: 204 RGRYGPECDWWSLGVCMYEML-YGETPFY 231
R+ D W VCM+E+L +G+ PF+
Sbjct: 186 --RFTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 106 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 160
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 161 --------DLKPSNLAVNEDXELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 206
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 207 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 231 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL 279
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 280 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 325
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 326 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 379
Query: 228 TPF 230
P+
Sbjct: 380 VPY 382
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 58 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL 106
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 107 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 152
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 153 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 206
Query: 228 TPF 230
P+
Sbjct: 207 VPY 209
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 43 SLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLT 102
++++ ++ S+ F+ +LR+ V + I L+ A + + LVM+Y GG L
Sbjct: 36 AIKQIESESERKAFIVELRQLSRV----NHPNIVKLYGACLNP--VCLVMEYAEGGSLYN 89
Query: 103 LLSKFEDRLPEDMAKFYIAE--MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN 160
+L E LP +Y A M + + Y+H A + RD+KP N+LL A
Sbjct: 90 VLHGAEP-LP-----YYTAAHAMSWCLQCSQGVAYLHSMQPKAL-IHRDLKPPNLLLVAG 142
Query: 161 GHI-RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVC 219
G + ++ DFG+ + T G+ +++PE+ EG Y +CD +S G+
Sbjct: 143 GTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEVF----EG-SNYSEKCDVFSWGII 193
Query: 220 MYEMLYGETPF 230
++E++ PF
Sbjct: 194 LWEVITRRKPF 204
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 115 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 169
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L D + VA T Y +PEI+
Sbjct: 170 --------DLKPSNLAVNEDCELKILDFG--LARHTDDEMXGXVA--TRWYRAPEIML-- 215
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 216 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 114 DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLR 173
++ K++ +++ +A H+ +HR D+KP N+L++ G ++L DFG
Sbjct: 108 NLVKYFQWQLLQGLAFCHENKILHR----------DLKPQNLLINKRGQLKLGDFGLARA 157
Query: 174 LGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
G S+ V T Y +P++L G Y D WS G + EM+ G+ F
Sbjct: 158 FGIPVNTFSSEVV-TLWYRAPDVLM----GSRTYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 80/214 (37%), Gaps = 28/214 (13%)
Query: 20 GRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLH 79
G VFS D LV C RE D AK +E +L I L
Sbjct: 128 GEVFSGRLRADNTLVAVKSC------RETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRP 139
+Y+VM+ GGD LT L RL + + + + +HR
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR- 237
Query: 140 NHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAV-GTP-DYISPEIL 197
D+ N L+ ++++DFG R DG ++ + P + +PE L
Sbjct: 238 ---------DLAARNCLVTEKNVLKISDFGMS-REEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 198 TAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
GRY E D WS G+ ++E G +P+
Sbjct: 288 NY-----GRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 43 SLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLT 102
+++ K +D E A + E + + G I NL A +YL+ +Y C GDLL
Sbjct: 79 AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLN 138
Query: 103 LLSKFEDRLPEDMAKFYIAEMV-----LAIASIHDL----HYVHRPNHF-AFHLC--RDI 150
L ++ ED ++ + + L + + DL + V + F F C RD+
Sbjct: 139 YLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198
Query: 151 KPDNVLLDANGHIRLADFGSCLRLGGDG--TVQSNVAVGTPDYISPEILTAMEEGRGRYG 208
NVL+ +++ DFG + D V+ N + +++PE L G Y
Sbjct: 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV-KWMAPESLF-----EGIYT 252
Query: 209 PECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
+ D WS G+ ++E+ G P+ + + K++ + D P
Sbjct: 253 IKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP 297
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 25/191 (13%)
Query: 43 SLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLT 102
++++ ++ S+ F+ +LR+ V + I L+ A + + LVM+Y GG L
Sbjct: 35 AIKQIESESERKAFIVELRQLSRV----NHPNIVKLYGACLNP--VCLVMEYAEGGSLYN 88
Query: 103 LLSKFEDRLPEDMAKFYIAE--MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN 160
+L E LP +Y A M + + Y+H A + RD+KP N+LL A
Sbjct: 89 VLHGAEP-LP-----YYTAAHAMSWCLQCSQGVAYLHSMQPKAL-IHRDLKPPNLLLVAG 141
Query: 161 GHI-RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVC 219
G + ++ DFG+ + T G+ +++PE+ EG Y +CD +S G+
Sbjct: 142 GTVLKICDFGTACDIQTHMTNNK----GSAAWMAPEVF----EG-SNYSEKCDVFSWGII 192
Query: 220 MYEMLYGETPF 230
++E++ PF
Sbjct: 193 LWEVITRRKPF 203
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 84 DDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFA 143
++ +++M+ Y G+L L + ++ L Y ++ A+A + ++ VH
Sbjct: 83 EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVH------ 136
Query: 144 FHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEG 203
RDI N+L+ + ++L DFG + + +++V ++SPE +
Sbjct: 137 ----RDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR--- 189
Query: 204 RGRYGPECDWWSLGVCMYEML-YGETPFY 231
R+ D W VCM+E+L +G+ PF+
Sbjct: 190 --RFTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMT----GYVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 101 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 155
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 156 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 201
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 21/219 (9%)
Query: 31 ILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYG--DRRWITNLHYAFQDDSNL 88
I+ YD ++ +K F R R++++ + + I L F +L
Sbjct: 33 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL 92
Query: 89 YLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
D Y +L+ L + L + + + +M+ I +H +HR
Sbjct: 93 EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR-------- 144
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+KP N+++ ++ +++ DFG R G + + V T Y +PE++ M
Sbjct: 145 --DLKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTPYVV-TRYYRAPEVILGM-----G 195
Query: 207 YGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M EM+ + F ++ + K++
Sbjct: 196 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 82 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR------ 135
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ A ++L DFG + +++ +++PE +
Sbjct: 136 ----DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 187
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 188 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 102 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 156
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 157 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 202
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 203 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 105 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 159
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 160 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 205
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 206 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
++ ++++M+ G+L + L + L Y ++ A+A + +VHR
Sbjct: 462 ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHR------ 515
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
DI NVL+ A ++L DFG + +++ +++PE +
Sbjct: 516 ----DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---- 567
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMN 244
R+ D W GVCM+E+L +G PF + G+I N
Sbjct: 568 -RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 100 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 154
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 155 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 200
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 100 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 154
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 155 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 200
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 201 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 94 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 148
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 149 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 194
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 195 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 101 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 155
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 156 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 201
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 97 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 151
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 152 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 197
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 97 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 151
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 152 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 197
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 23/229 (10%)
Query: 7 LEALFLGGPIQGKG---RVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREE 63
EA + GP+ GKG VF+ L D L V + + +SD + ++
Sbjct: 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL 88
Query: 64 RDVLVYGDRRWITNLHYAFQDDSNLYLVMDY-YCGGDLLTLLSKFEDRLPEDMAKFYIAE 122
V G + L F+ LV++ DL +++ + L E ++ + +
Sbjct: 89 WKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQ 147
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLGGDGTVQ 181
+V AI H VHR DIK +N+L+D G +L DFGS L +
Sbjct: 148 VVAAIQHCHSRGVVHR----------DIKDENILIDLRRGCAKLIDFGSGALLHDEPYTD 197
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
+ GT Y PE ++ + + WSLG+ +Y+M+ G+ PF
Sbjct: 198 FD---GTRVYSPPEWISRHQ----YHALPATVWSLGILLYDMVCGDIPF 239
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 91 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 145
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 146 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 191
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 101 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 155
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 156 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 201
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 202 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 118 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 172
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L D + VA T Y +PEI+
Sbjct: 173 --------DLKPSNLAVNEDCELKILDFG--LARHTDDEMXGYVA--TRWYRAPEIML-- 218
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 219 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 92 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 146
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 147 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 192
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 193 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 91 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 145
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 146 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 191
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 92 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 146
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 147 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 192
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 193 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 107 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 161
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 162 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 207
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 208 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 97 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 151
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 152 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 197
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 198 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 80/214 (37%), Gaps = 28/214 (13%)
Query: 20 GRVFSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLH 79
G VFS D LV C RE D AK +E +L I L
Sbjct: 128 GEVFSGRLRADNTLVAVKSC------RETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRP 139
+Y+VM+ GGD LT L RL + + + + +HR
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR- 237
Query: 140 NHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAV-GTP-DYISPEIL 197
D+ N L+ ++++DFG R DG ++ + P + +PE L
Sbjct: 238 ---------DLAARNCLVTEKNVLKISDFGMS-REEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 198 TAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
GRY E D WS G+ ++E G +P+
Sbjct: 288 NY-----GRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 107 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 161
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 162 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 207
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 208 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 107 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 161
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 162 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 207
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 208 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 106 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 160
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 161 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 206
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 207 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 93 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 147
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 148 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 193
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 194 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L D + VA T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFG--LARHTDDEMAGFVA--TRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L D + VA T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDFG--LARHTDDEMAGFVA--TRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 115 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 169
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 170 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 215
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 216 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 115 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 169
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 170 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 215
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 216 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 114 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 168
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 169 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 214
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 215 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 59 KLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKF 118
++ E ++ D +I L Q ++ L LVM+ GG L L + +P
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 440
Query: 119 YIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG 178
+ ++ + + + + ++VHR ++ NVLL + +++DFG LG D
Sbjct: 441 LLHQVSMGMKYLEEKNFVHR----------NLAARNVLLVNRHYAKISDFGLSKALGADD 490
Query: 179 TVQSNVAVGT-P-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
+ + + G P + +PE + ++ D WS GV M+E L YG+ P+
Sbjct: 491 SYYTARSAGKWPLKWYAPECINFR-----KFSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 149 DIKPDNVLL--DANGHIRLADFGSCLRLGGD--GTVQSNVAVGTPDYISPEILTAMEEGR 204
D+KP+N+LL I++ DFGS +LG +QS Y SPE+L M
Sbjct: 165 DLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF------YRSPEVLLGMP--- 215
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D WSLG + EM GE F + V+ KI+
Sbjct: 216 --YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 149 DIKPDNVLL--DANGHIRLADFGSCLRLGGD--GTVQSNVAVGTPDYISPEILTAMEEGR 204
D+KP+N+LL I++ DFGS +LG +QS Y SPE+L M
Sbjct: 184 DLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF------YRSPEVLLGMP--- 234
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D WSLG + EM GE F + V+ KI+
Sbjct: 235 --YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 118 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 172
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L + V T Y +PEI+
Sbjct: 173 --------DLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIML-- 218
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 219 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 114 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 168
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 169 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 214
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 215 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 54 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL 102
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 103 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 148
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 149 LA-RLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 202
Query: 228 TPF 230
P+
Sbjct: 203 VPY 205
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 56 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL 104
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 105 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 150
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 151 LA-RLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 204
Query: 228 TPF 230
P+
Sbjct: 205 VPY 207
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 91 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 145
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG L D + VA T Y +PEI+
Sbjct: 146 --------DLKPSNLAVNEDCELKILDFG--LARHTDDEMAGFVA--TRWYRAPEIML-- 191
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 99 DLLTLLSKFEDR-LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
DL T L K LP + K + + + + +H VHR D+KP+N+L+
Sbjct: 104 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR----------DLKPENILV 153
Query: 158 DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLG 217
+ G ++LADFG R+ + V V T Y +PE+L + Y D WS+G
Sbjct: 154 TSGGTVKLADFG-LARIYSYQMALTPVVV-TLWYRAPEVLL-----QSTYATPVDMWSVG 206
Query: 218 VCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
EM + F S + GKI FDL +G DD
Sbjct: 207 CIFAEMFRRKPLFCGNSEADQLGKI------FDL---IGLPPEDD 242
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 232 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL 280
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 281 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 326
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 327 -LGRLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 380
Query: 228 TPF 230
P+
Sbjct: 381 VPY 383
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RLPE--DMAKFYIAEMVLAIASIHDLH 134
YA + +Y+V +Y G LL L RLP+ DMA A++ +A + ++
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA----AQIASGMAYVERMN 134
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
YVHR D++ N+L+ N ++ADFG RL D + P + +
Sbjct: 135 YVHR----------DLRAANILVGENLVCKVADFG-LARLIEDNEYTARQGAKFPIKWTA 183
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGETPF 230
PE GR+ + D WS G+ + E+ G P+
Sbjct: 184 PEAALY-----GRFTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + ++ P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 99 DLLTLLSKFEDR-LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
DL T L K LP + K + + + + +H VHR D+KP+N+L+
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR----------DLKPENILV 145
Query: 158 DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLG 217
+ G ++LADFG R+ + V V T Y +PE+L + Y D WS+G
Sbjct: 146 TSGGTVKLADFG-LARIYSYQMALAPVVV-TLWYRAPEVLL-----QSTYATPVDMWSVG 198
Query: 218 VCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
EM + F S + GKI FDL +G DD
Sbjct: 199 CIFAEMFRRKPLFCGNSEADQLGKI------FDL---IGLPPEDD 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 91 SLEEFNDVYLVT-HLMGADLNNIVKC--AKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 145
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DFG + T V T Y +PEI+
Sbjct: 146 --------DLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VATRWYRAPEIML-- 191
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 192 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 68 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 121
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 122 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT 178
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 179 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 233
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 234 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 275
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 70 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 123
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 124 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 180
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 181 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 235
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 236 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 277
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 127 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 180
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 181 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 237
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV-----YTHQSDVWSFG 292
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 293 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 334
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 LA-RLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 149 DIKPDNVLL--DANGHIRLADFGSCLRLGGD--GTVQSNVAVGTPDYISPEILTAMEEGR 204
D+KP+N+LL I++ DFGS +LG +QS Y SPE+L M
Sbjct: 184 DLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF------YRSPEVLLGMP--- 234
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D WSLG + EM GE F + V+ KI+
Sbjct: 235 --YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 73 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 126
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 127 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 183
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 184 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 238
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 239 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 280
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 86 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 137
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 138 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 190
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 191 SKFSVASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 138
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 139 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 191
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 192 SKFSVASDVWSFGVVLYELF 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 92 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 143
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 144 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 196
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 197 SKFSVASDVWSFGVVLYELF 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 22/226 (9%)
Query: 44 LRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTL 103
L+ + T D + V+++ + + G + I NL A D LY++++Y G+L
Sbjct: 75 LKDDATEEDLSDLVSEMEMMK---MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 104 LSKFEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNV 155
L R P M Y + E + + Y + A C RD+ NV
Sbjct: 132 LRA---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 188
Query: 156 LLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWW 214
L+ N +++ADFG + + P +++PE L Y + D W
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVW 243
Query: 215 SLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
S GV M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 244 SFGVLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 94 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 145
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 146 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 198
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 199 SKFSVASDVWSFGVVLYELF 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 169
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 170 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 222
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 223 SKFSVASDVWSFGVVLYELF 242
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 90 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 141
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 142 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 194
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 195 SKFSVASDVWSFGVVLYELF 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 93 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 144
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 145 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 197
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 198 SKFSVASDVWSFGVVLYELF 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ D+G L + V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDYG----LARHTDDEMTGYVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 85 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 136
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 137 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 189
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 190 SKFSVASDVWSFGVVLYELF 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 138
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 139 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 191
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 192 SKFSVASDVWSFGVVLYELF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 91 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 142
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 143 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 195
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 196 SKFSVASDVWSFGVVLYELF 215
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 99 DLLTLLSKFEDR-LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
DL T L K LP + K + + + + +H VHR D+KP+N+L+
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR----------DLKPENILV 145
Query: 158 DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLG 217
+ G ++LADFG R+ V V T Y +PE+L + Y D WS+G
Sbjct: 146 TSGGTVKLADFG-LARIYSYQMALDPVVV-TLWYRAPEVLL-----QSTYATPVDMWSVG 198
Query: 218 VCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
EM + F S + GKI FDL +G DD
Sbjct: 199 CIFAEMFRRKPLFCGNSEADQLGKI------FDL---IGLPPEDD 234
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D+ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVHR----------DLAAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 105 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 156
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 157 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 209
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 210 SKFSVASDVWSFGVVLYELF 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 62 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRL 110
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DM+ A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 111 PQLVDMS----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 156
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 157 -LARLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 210
Query: 228 TPF 230
P+
Sbjct: 211 VPY 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 105 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 156
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 157 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 209
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 210 SKFSVASDVWSFGVVLYELF 229
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 65 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL 113
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 114 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 159
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 160 LA-RLIEDNEYTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 213
Query: 228 TPF 230
P+
Sbjct: 214 VPY 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++YLV + G DL LL L D +++ +++ + IH + +HR
Sbjct: 119 KDVYLVT-HLMGADLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 168
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 169 ---DLKPSNLLLNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 221
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 222 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 41 NSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDL 100
NS+ KT+ V EE +++ + L+ + +Y++ ++ G L
Sbjct: 35 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL 94
Query: 101 LTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD-LHYVHRPNHFAFHLCRDIKPDNVLLDA 159
L L E K + +++ A I + + Y+ R N+ + RD++ NVL+
Sbjct: 95 LDFLKSDEG------GKVLLPKLIDFSAQIAEGMAYIERKNY----IHRDLRAANVLVSE 144
Query: 160 NGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGV 218
+ ++ADFG R+ D + P + +PE + G + + + WS G+
Sbjct: 145 SLMCKIADFG-LARVIEDNEYTAREGAKFPIKWTAPEAINF-----GCFTIKSNVWSFGI 198
Query: 219 CMYEML-YGETPF 230
+YE++ YG+ P+
Sbjct: 199 LLYEIVTYGKIPY 211
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 71 DRRWITNLHYAFQDDSNLYLVMDYYCGGDLL--TLLSKFEDRLPEDMAKFYIAEMVLAIA 128
+ + I +L F L D Y +L+ L L + + + +M+ I
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK 138
Query: 129 SIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT 188
+H +HR D+KP N+++ ++ +++ DFG L V T
Sbjct: 139 HLHSAGIIHR----------DLKPSNIVVKSDCTLKILDFG--LARTASTNFMMTPYVVT 186
Query: 189 PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y +PE++ M Y D WS+G M E++ G F ++ + K++
Sbjct: 187 RYYRAPEVILGM-----GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY+++ Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I NL A D LY+++ Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + +Y+V +Y G LL L RL
Sbjct: 62 QVMKKLRHEKLVQLY-----------AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRL 110
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DM+ A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 111 PQLVDMS----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 156
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 157 -LARLIEDNEWTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 210
Query: 228 TPF 230
P+
Sbjct: 211 VPY 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
L LVM+Y G L L + RL Y +++ + + VHR
Sbjct: 84 ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR-------- 135
Query: 147 CRDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
D+ N+L+++ H+++ADFG L L D V + +PE L+ R
Sbjct: 136 --DLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSR 193
Query: 205 GRYGPECDWWSLGVCMYEML 224
+ D WS GV +YE+
Sbjct: 194 -----QSDVWSFGVVLYELF 208
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 99 DLLTLLSKFEDR-LPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
DL T L K LP + K + + + + +H VHR D+KP+N+L+
Sbjct: 96 DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHR----------DLKPENILV 145
Query: 158 DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLG 217
+ G ++LADFG R+ V V T Y +PE+L + Y D WS+G
Sbjct: 146 TSGGTVKLADFG-LARIYSYQMALFPVVV-TLWYRAPEVLL-----QSTYATPVDMWSVG 198
Query: 218 VCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDD 262
EM + F S + GKI FDL +G DD
Sbjct: 199 CIFAEMFRRKPLFCGNSEADQLGKI------FDL---IGLPPEDD 234
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NVL+D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVLIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M++ G L L K ++R+ Y +++ + + Y+HR
Sbjct: 90 NLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 141
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 142 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 194
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 195 SKFSVASDVWSFGVVLYELF 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 138
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 139 --DLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE----- 191
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 192 SKFSVASDVWSFGVVLYELF 211
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 38/183 (20%)
Query: 55 EFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFED---RL 111
+ + KLR E+ V +Y A + + +V +Y G LL L RL
Sbjct: 55 QVMKKLRHEKLVQLY-----------AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRL 103
Query: 112 PE--DMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG 169
P+ DMA A++ +A + ++YVHR D++ N+L+ N ++ADFG
Sbjct: 104 PQLVDMA----AQIASGMAYVERMNYVHR----------DLRAANILVGENLVCKVADFG 149
Query: 170 SCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM-LYGE 227
RL D + P + +PE GR+ + D WS G+ + E+ G
Sbjct: 150 -LARLIEDNEXTARQGAKFPIKWTAPEAALY-----GRFTIKSDVWSFGILLTELTTKGR 203
Query: 228 TPF 230
P+
Sbjct: 204 VPY 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 30 DILLVLYDECCNSSLRREKTVSDFIE-FVAKLREERDVLVYGDRRWITNLHYAFQDDSNL 88
++ + Y++ +++ K S +E F+A E +V+ + LH A +
Sbjct: 30 EVWMATYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVKLH-AVVTKEPI 84
Query: 89 YLVMDYYCGGDLLTLLSKFE-DRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G LL L E + P + A++ +A I +Y+HR
Sbjct: 85 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR--------- 135
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
D++ N+L+ A+ ++ADFG R+ D + P + +PE + G
Sbjct: 136 -DLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIKWTAPEAINF-----GS 188
Query: 207 YGPECDWWSLGVCMYEML-YGETPF 230
+ + D WS G+ + E++ YG P+
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 87 NLYLVMDYYCGGDLLTLL-----SKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPN 140
N+ L M Y L + S L KF + +++ +A + + Y+H +
Sbjct: 69 NILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTA 199
+ RD+K +N+ L + +++ DFG + ++ G+ Q G+ +++PE++
Sbjct: 129 I----IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 200 MEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ Y + D ++ G+ +YE++ G+ P+ S + +I+ L D+ ++
Sbjct: 185 QDS--NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQIIEMVGRGSLSPDLS-KV 238
Query: 260 SDDAKDLMRRLIC 272
+ M+RL+
Sbjct: 239 RSNCPKRMKRLMA 251
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+L LVM+Y G L L + RL Y +++ + + VHR
Sbjct: 87 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR-------- 138
Query: 147 CRDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
D+ N+L+++ H+++ADFG L L D V + +PE L+ R
Sbjct: 139 --DLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 196
Query: 205 GRYGPECDWWSLGVCMYEML 224
+ D WS GV +YE+
Sbjct: 197 -----QSDVWSFGVVLYELF 211
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ FG + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILGFGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 30 DILLVLYDECCNSSLRREKTVSDFIE-FVAKLREERDVLVYGDRRWITNLHYAFQDDSNL 88
++ + Y++ +++ K S +E F+A E +V+ + LH A +
Sbjct: 203 EVWMATYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVKLH-AVVTKEPI 257
Query: 89 YLVMDYYCGGDLLTLLSKFE-DRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G LL L E + P + A++ +A I +Y+HR
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR--------- 308
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
D++ N+L+ A+ ++ADFG R+ D + P + +PE + G
Sbjct: 309 -DLRAANILVSASLVCKIADFG-LARVIEDNEYTAREGAKFPIKWTAPEAINF-----GS 361
Query: 207 YGPECDWWSLGVCMYEML-YGETPF 230
+ + D WS G+ + E++ YG P+
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 132 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 180
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 181 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 235
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 236 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 273
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 133 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 181
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 182 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 237 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 274
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWGLA-EFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 81/184 (44%), Gaps = 30/184 (16%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+F++ + +Y++ + DL ++S L +D +++I + + A+ +H + +HR
Sbjct: 82 SFENFNEVYIIQEL-MQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVIHR-- 136
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRL---GGDGTVQSNVAVGTPDYI----- 192
D+KP N+L+++N +++ DFG + D + + G +Y+
Sbjct: 137 --------DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 193 -SPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQN 247
+PE++ +Y D WS G + E+ F Y L+ +G I +
Sbjct: 189 RAPEVMLT----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 248 SFDL 251
DL
Sbjct: 245 DNDL 248
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 84/240 (35%), Gaps = 59/240 (24%)
Query: 68 VYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAI 127
V G + + + Y F+ + ++ + M Y L +L + L + Y+ + A+
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKAL 130
Query: 128 ASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLGGDGT------- 179
IH VHR D+KP N L + L DFG L G T
Sbjct: 131 KRIHQFGIVHR----------DVKPSNFLYNRRLKKYALVDFG--LAQGTHDTKIELLKF 178
Query: 180 VQSNVA----------------------VGTPDYISPEILTAMEEGRGRYGPECDWWSLG 217
VQS GTP + +PE+LT D WS G
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN----QTTAIDMWSAG 234
Query: 218 VCMYEMLYGETPFY-AESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRRLICSSDT 276
V +L G PFY A + +IM + S E AK + ++CS +
Sbjct: 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGS--------RETIQAAKTFGKSILCSKEV 286
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 133 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 181
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 182 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 237 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 274
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+L LVM+Y G L L + RL Y +++ + + VHR
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR-------- 151
Query: 147 CRDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
D+ N+L+++ H+++ADFG L L D V + +PE L+ R
Sbjct: 152 --DLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 209
Query: 205 GRYGPECDWWSLGVCMYEML 224
+ D WS GV +YE+
Sbjct: 210 -----QSDVWSFGVVLYELF 224
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 182
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 183 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+L LVM+Y G L L + RL Y +++ + + VHR
Sbjct: 88 SLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR-------- 139
Query: 147 CRDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGR 204
D+ N+L+++ H+++ADFG L L D V + +PE L+ R
Sbjct: 140 --DLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSR 197
Query: 205 GRYGPECDWWSLGVCMYEML 224
+ D WS GV +YE+
Sbjct: 198 -----QSDVWSFGVVLYELF 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I L A D LY++++Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G L
Sbjct: 134 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG--LAEF 181
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
+ NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 182 YHPGQEYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 237
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 238 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 275
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLD-ANGHIRLADFGSCLRLG 175
+FY+ E++ A+ H + +HR D+KP NV++D + +RL D+G
Sbjct: 139 RFYMYEILKALDYCHSMGIMHR----------DVKPHNVMIDHEHRKLRLIDWG-LAEFY 187
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYA--- 232
G + NV V + + PE+L + Y D WSLG + M++ + PF+
Sbjct: 188 HPGQ-EYNVRVASRYFKGPELLVDYQ----MYDYSLDMWSLGCMLASMIFRKEPFFHGHD 242
Query: 233 --ESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDLMRR 269
+ LV K++ ++ +D E+ D++ R
Sbjct: 243 NYDQLVRI-AKVLGTEDLYDYIDKYNIELDPRFNDILGR 280
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ DF L D + VA T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDF--YLARHTDDEMTGYVA--TRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 90 LVMDYYCGGD---LLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
LV +Y D L +L+ F+ R FY+ E++ A+ H +HR
Sbjct: 117 LVFEYINNTDFKQLYQILTDFDIR-------FYMYELLKALDYCHSKGIMHR-------- 161
Query: 147 CRDIKPDNVLLD-ANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+KP NV++D +RL D+G L + NV V + + PE+L +
Sbjct: 162 --DVKPHNVMIDHQQKKLRLIDWG--LAEFYHPAQEYNVRVASRYFKGPELLVDYQ---- 213
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFY 231
Y D WSLG + M++ PF+
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPFF 239
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD + + ++ + G + I +L A D LY++++Y G+L L
Sbjct: 81 EKDLSDLVSEMEMMK------MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA 134
Query: 107 FEDRLPEDMAKFY----IAEMVLAIASIHDLHY--VHRPNHFAFHLC--RDIKPDNVLLD 158
R P M Y + E + + Y + A C RD+ NVL+
Sbjct: 135 ---RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
N +++ADFG + + P +++PE L Y + D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR-----VYTHQSDVWSFG 246
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V M+E+ G +P Y VE K++ + D P++ E+
Sbjct: 247 VLMWEIFTLGGSP-YPGIPVEELFKLLKEGHRMDKPANCTNEL 288
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 90 LVMDYYCGGD---LLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
LV +Y D L +L+ F+ R FY+ E++ A+ H +HR
Sbjct: 112 LVFEYINNTDFKQLYQILTDFDIR-------FYMYELLKALDYCHSKGIMHR-------- 156
Query: 147 CRDIKPDNVLLD-ANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+KP NV++D +RL D+G L + NV V + + PE+L +
Sbjct: 157 --DVKPHNVMIDHQQKKLRLIDWG--LAEFYHPAQEYNVRVASRYFKGPELLVDYQ---- 208
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFY 231
Y D WSLG + M++ PF+
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFF 234
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 33/204 (16%)
Query: 30 DILLVLYDECCNSSLRREKTVSDFIE-FVAKLREERDVLVYGDRRWITNLHYAFQDDSNL 88
++ + Y++ +++ K S +E F+A E +V+ + LH A +
Sbjct: 197 EVWMATYNKHTKVAVKTMKPGSMSVEAFLA----EANVMKTLQHDKLVKLH-AVVTKEPI 251
Query: 89 YLVMDYYCGGDLLTLLSKFE-DRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G LL L E + P + A++ +A I +Y+HR
Sbjct: 252 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHR--------- 302
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
D++ N+L+ A+ ++ADFG R+G ++ + +PE + G +
Sbjct: 303 -DLRAANILVSASLVCKIADFG-LARVGAKFPIK---------WTAPEAINF-----GSF 346
Query: 208 GPECDWWSLGVCMYEML-YGETPF 230
+ D WS G+ + E++ YG P+
Sbjct: 347 TIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ D G + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDAGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L K ++R+ Y +++ + + Y+HR
Sbjct: 88 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 139
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
++ N+L++ +++ DFG L D G + +PE LT
Sbjct: 140 --NLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE----- 192
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 193 SKFSVASDVWSFGVVLYELF 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 82 FQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
FQD +YLVM+ L L + + + +M+ I +H +HR
Sbjct: 101 FQD---VYLVMELMDAN----LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR--- 150
Query: 142 FAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAME 201
D+KP N+++ ++ +++ DFG L V T Y +PE++ M
Sbjct: 151 -------DLKPSNIVVKSDCTLKILDFG--LARTACTNFMMTPYVVTRYYRAPEVILGM- 200
Query: 202 EGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 245
Y D WS+G M E++ G F ++ + K++
Sbjct: 201 ----GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQ 240
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ D G L + V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDRG----LARHTDDEMTGYVATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y+++++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 85 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 135
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-----AYNKF 190
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 41/155 (26%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
Q + +L LVM+Y G L L + L + + + ++ +A +H HY+HR
Sbjct: 88 QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL--LFAQQICEGMAYLHSQHYIHR---- 141
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
++ NVLLD + +++ DFG +A P+ E E+
Sbjct: 142 ------NLAARNVLLDNDRLVKIGDFG--------------LAKAVPE--GHEYYRVRED 179
Query: 203 GRGR---YGPEC----------DWWSLGVCMYEML 224
G Y PEC D WS GV +YE+L
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+KP+N+L+ A+ L DFG + Q VGT Y +PE + E Y
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFS---ESHATY 214
Query: 208 GPECDWWSLGVCMYEMLYGETPFYAESL 235
D ++L +YE L G P+ + L
Sbjct: 215 --RADIYALTCVLYECLTGSPPYQGDQL 240
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 87 NLYLVMDYYCGGDLLTLL-----SKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPN 140
N+ L M Y L + S L KF + +++ +A + + Y+H +
Sbjct: 81 NILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTA 199
+ RD+K +N+ L + +++ DFG + + G+ Q G+ +++PE++
Sbjct: 141 I----IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 200 MEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ Y + D ++ G+ +YE++ G+ P+ S + +I+ L D+ ++
Sbjct: 197 QDS--NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQIIEMVGRGSLSPDLS-KV 250
Query: 260 SDDAKDLMRRLIC 272
+ M+RL+
Sbjct: 251 RSNCPKRMKRLMA 263
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 30/154 (19%)
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
D L + +Y GG L ++ + + P + ++ +A +H ++ +H
Sbjct: 79 DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH------- 131
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSN--------------VAVGTPD 190
RD+ N L+ N ++ +ADFG RL D Q VG P
Sbjct: 132 ---RDLNSHNCLVRENKNVVVADFG-LARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
+++PE++ GR Y + D +S G+ + E++
Sbjct: 188 WMAPEMIN----GRS-YDEKVDVFSFGIVLCEII 216
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 34 VLYDECCNSSLRREKTVSDFIEFVAK-----LREERDVLV-YGDRRWITNLHYAFQDDSN 87
VL LR + + E+ +K E +VL G I NL A +
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLA-IASIHDLHY---VHRPNHFA 143
LYL ++Y G+LL L K R+ E F IA + ++S LH+ V R +
Sbjct: 101 LYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 158
Query: 144 FH---LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
+ RD+ N+L+ N ++ADFG L G + V+ + +++ E L
Sbjct: 159 SQKQFIHRDLAARNILVGENYVAKIADFG--LSRGQEVYVKKTMGRLPVRWMAIESLNY- 215
Query: 201 EEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
Y D WS GV ++E++ G TP+ + E Y K+ + L +
Sbjct: 216 ----SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL---PQGYRLEKPLN--C 266
Query: 260 SDDAKDLMRR 269
D+ DLMR+
Sbjct: 267 DDEVYDLMRQ 276
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+ N + + + F V LR+ R V + L + L +V + G
Sbjct: 41 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEG 92
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
L L E KF + +++ +A + + Y+H + + RD+K +N+
Sbjct: 93 SSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIF 141
Query: 157 LDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
L + +++ DFG + ++ G+ Q G+ +++PE++ + + Y + D ++
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYA 199
Query: 216 LGVCMYEMLYGETPF 230
G+ +YE++ G+ P+
Sbjct: 200 FGIVLYELMTGQLPY 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+ ++ +++YLV + G DL ++ +L +D +F I +++ + IH +HR
Sbjct: 95 SLEEFNDVYLVT-HLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSADIIHR-- 149
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
D+KP N+ ++ + +++ D G + T V T Y +PEI+
Sbjct: 150 --------DLKPSNLAVNEDCELKILDGGLARHTDDEMTGY----VATRWYRAPEIML-- 195
Query: 201 EEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y D WS+G M E+L G T F
Sbjct: 196 --NWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+ N + + + F V LR+ R V + L + L +V + G
Sbjct: 36 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEG 87
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
L L E KF + +++ +A + + Y+H + + RD+K +N+
Sbjct: 88 SSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIF 136
Query: 157 LDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
L + +++ DFG + ++ G+ Q G+ +++PE++ + + Y + D ++
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYA 194
Query: 216 LGVCMYEMLYGETPF 230
G+ +YE++ G+ P+
Sbjct: 195 FGIVLYELMTGQLPY 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 34 VLYDECCNSSLRREKTVSDFIEFVAK-----LREERDVLV-YGDRRWITNLHYAFQDDSN 87
VL LR + + E+ +K E +VL G I NL A +
Sbjct: 31 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 90
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLA-IASIHDLHY---VHRPNHFA 143
LYL ++Y G+LL L K R+ E F IA + ++S LH+ V R +
Sbjct: 91 LYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 148
Query: 144 FH---LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
+ RD+ N+L+ N ++ADFG L G + V+ + +++ E L
Sbjct: 149 SQKQFIHRDLAARNILVGENYVAKIADFG--LSRGQEVYVKKTMGRLPVRWMAIESLNY- 205
Query: 201 EEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
Y D WS GV ++E++ G TP+ + E Y K+ + L +
Sbjct: 206 ----SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL---PQGYRLEKPLN--C 256
Query: 260 SDDAKDLMRR 269
D+ DLMR+
Sbjct: 257 DDEVYDLMRQ 266
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+ N + + + F V LR+ R V + L + L +V + G
Sbjct: 38 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEG 89
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
L L E KF + +++ +A + + Y+H + + RD+K +N+
Sbjct: 90 SSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIF 138
Query: 157 LDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
L + +++ DFG + ++ G+ Q G+ +++PE++ + + Y + D ++
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYA 196
Query: 216 LGVCMYEMLYGETPF 230
G+ +YE++ G+ P+
Sbjct: 197 FGIVLYELMTGQLPY 211
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V+D DL ++ + L + ++++ +++ + +H +HR
Sbjct: 132 KSVYVVLDL-MESDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHSAQVIHR------- 182
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS---NVAVGTPDYISPEILTAMEE 202
D+KP N+L++ N +++ DFG L V T Y +PE++ ++ E
Sbjct: 183 ---DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 239
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D WS+G EML F ++ V IM
Sbjct: 240 ----YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+ N + + + F V LR+ R V + L + L +V + G
Sbjct: 41 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEG 92
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
L L E KF + +++ +A + + Y+H + + RD+K +N+
Sbjct: 93 SSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIF 141
Query: 157 LDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
L + +++ DFG + ++ G+ Q G+ +++PE++ + + Y + D ++
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYA 199
Query: 216 LGVCMYEMLYGETPF 230
G+ +YE++ G+ P+
Sbjct: 200 FGIVLYELMTGQLPY 214
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y+++++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 134
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y+++++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 89 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 139
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 194
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 112/283 (39%), Gaps = 49/283 (17%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
D +++ K+ + E A + E + + G I NL A + ++ +Y C
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 97 GGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH----FAFHLC--RDI 150
GDLL L + + R+ E F IA L+ + LH+ + A C RD+
Sbjct: 134 YGDLLNFLRR-KSRVLETDPAFAIANSTLSTRDL--LHFSSQVAQGMAFLASKNCIHRDV 190
Query: 151 KPDNVLLDANGHI-RLADFGSCLRLGGDGT--VQSNVAVGTPDYISPEILTAMEEGRGRY 207
NVLL NGH+ ++ DFG + D V+ N + +++PE + Y
Sbjct: 191 AARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDC-----VY 243
Query: 208 GPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKDL 266
+ D WS G+ ++E+ G P Y I+ + + L D GY+
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNP---------YPGILVNSKFYKLVKD-GYQ-------- 285
Query: 267 MRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
+ Q A ++S + ++ P + P FQ I
Sbjct: 286 -----------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 26/198 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ LYL+ DY+ G L L K + M K + V + +H + + H
Sbjct: 108 TQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSS-VSGLCHLHTEIFSTQGKPAIAH 165
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT---VQSNVAVGTPDYISPEIL-TAME 201
RD+K N+L+ NG +AD G ++ D + N VGT Y+ PE+L ++
Sbjct: 166 --RDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLN 223
Query: 202 EGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD--LPSDVGYEI 259
+ D +S G+ ++E+ A V + G + +Q + +PSD YE
Sbjct: 224 RNHFQSYIMADMYSFGLILWEV--------ARRCV-SGGIVEEYQLPYHDLVPSDPSYED 274
Query: 260 SDDAKDLMRRLICSSDTR 277
MR ++C R
Sbjct: 275 -------MREIVCIKKLR 285
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+ N + + + F V LR+ R V + L + L +V + G
Sbjct: 63 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEG 114
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
L L E KF + +++ +A + + Y+H + + RD+K +N+
Sbjct: 115 SSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIF 163
Query: 157 LDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
L + +++ DFG + ++ G+ Q G+ +++PE++ + + Y + D ++
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYA 221
Query: 216 LGVCMYEMLYGETPF 230
G+ +YE++ G+ P+
Sbjct: 222 FGIVLYELMTGQLPY 236
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y+++++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 134
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 101 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 150
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 151 ---DLKPSNLLLNTTSDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 203
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 204 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 41/155 (26%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
Q + +L LVM+Y G L L + L + + + ++ +A +H HY+HR
Sbjct: 88 QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL--LFAQQICEGMAYLHAQHYIHR---- 141
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
++ NVLLD + +++ DFG +A P+ E E+
Sbjct: 142 ------NLAARNVLLDNDRLVKIGDFG--------------LAKAVPE--GHEYYRVRED 179
Query: 203 GRGR---YGPEC----------DWWSLGVCMYEML 224
G Y PEC D WS GV +YE+L
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 48 KTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKF 107
+ + F V LR+ R V + L + L +V + G L L
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEGSSLYHHLHII 125
Query: 108 EDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
E KF + +++ +A + + Y+H + + RD+K +N+ L + +++
Sbjct: 126 E-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIFLHEDLTVKIG 174
Query: 167 DFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLY 225
DFG + ++ G+ Q G+ +++PE++ + + Y + D ++ G+ +YE++
Sbjct: 175 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYAFGIVLYELMT 232
Query: 226 GETPF 230
G+ P+
Sbjct: 233 GQLPY 237
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 99 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 149 ---DLKPSNLLLNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 201
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 202 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V+D DL ++ + L + ++++ +++ + +H +HR
Sbjct: 133 KSVYVVLDL-MESDLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHSAQVIHR------- 183
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQS---NVAVGTPDYISPEILTAMEE 202
D+KP N+L++ N +++ DFG L V T Y +PE++ ++ E
Sbjct: 184 ---DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 240
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D WS+G EML F ++ V IM
Sbjct: 241 ----YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 116 AKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFG-SCLR 173
KF + +++ +A + + Y+H + + RD+K +N+ L + +++ DFG + ++
Sbjct: 99 TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
Query: 174 LGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
G+ Q G+ +++PE++ + + Y + D ++ G+ +YE++ G+ P+
Sbjct: 155 SRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 17/140 (12%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
NL L+M+Y G L L +R+ Y +++ + + Y+HR
Sbjct: 90 NLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHR-------- 141
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGR 204
D+ N+L++ +++ DFG L D G + +PE LT
Sbjct: 142 --DLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE----- 194
Query: 205 GRYGPECDWWSLGVCMYEML 224
++ D WS GV +YE+
Sbjct: 195 SKFSVASDVWSFGVVLYELF 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 41/152 (26%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++L LVM+Y G L L + L + + + ++ +A +H HY+HR
Sbjct: 108 ASLQLVMEYVPLGSLRDYLPRHSIGLAQLL--LFAQQICEGMAYLHAQHYIHR------- 158
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVLLD + +++ DFG +A P+ E E+G
Sbjct: 159 ---DLAARNVLLDNDRLVKIGDFG--------------LAKAVPE--GHEXYRVREDGDS 199
Query: 206 R---YGPEC----------DWWSLGVCMYEML 224
Y PEC D WS GV +YE+L
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 139
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-----AYNKF 194
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 99 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 149 ---DLKPSNLLLNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 201
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 202 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 99 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 149 ---DLKPSNLLLNTTXDLKIXDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 201
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 202 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 103 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 152
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 153 ---DLKPSNLLLNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 205
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 206 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 103 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 152
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 153 ---DLKPSNLLLNTTXDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 205
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 206 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 113/284 (39%), Gaps = 51/284 (17%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
D +++ K+ + E A + E + + G I NL A + ++ +Y C
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 97 GGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHD-LHYVHRPNH----FAFHLC--RD 149
GDLL L + + R+ E F IA + AS D LH+ + A C RD
Sbjct: 134 YGDLLNFLRR-KSRVLETDPAFAIAN---STASTRDLLHFSSQVAQGMAFLASKNCIHRD 189
Query: 150 IKPDNVLLDANGHI-RLADFGSCLRLGGDGT--VQSNVAVGTPDYISPEILTAMEEGRGR 206
+ NVLL NGH+ ++ DFG + D V+ N + +++PE +
Sbjct: 190 VAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDC-----V 242
Query: 207 YGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAKD 265
Y + D WS G+ ++E+ G P Y I+ + + L D GY+
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNP---------YPGILVNSKFYKLVKD-GYQ------- 285
Query: 266 LMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
+ Q A ++S + ++ P + P FQ I
Sbjct: 286 ------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 87 NLYLVMDYYCGGDLLTLL-----SKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPN 140
N+ L M Y L + S L KF + +++ +A + + Y+H +
Sbjct: 81 NILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTA 199
+ RD+K +N+ L + +++ DFG + + G+ Q G+ +++PE++
Sbjct: 141 I----IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 200 MEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ Y + D ++ G+ +YE++ G+ P+ S + +I+ L D+ ++
Sbjct: 197 QDS--NPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQIIEMVGRGSLSPDLS-KV 250
Query: 260 SDDAKDLMRRLIC 272
+ M+RL+
Sbjct: 251 RSNCPKRMKRLMA 263
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G L
Sbjct: 130 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWG--LAEF 177
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 178 YHPGKEYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 229
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G L
Sbjct: 129 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWG--LAEF 176
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 177 YHPGKEYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 228
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y+++++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 82 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 132
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-----AYNKF 187
Query: 208 GPECDWWSLGVCMYEM-LYGETPF 230
+ D W+ GV ++E+ YG +P+
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G
Sbjct: 129 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWGLA-EFY 177
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
G + NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 178 HPGK-EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 228
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query: 90 LVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI-------HDLHYVHRPNHF 142
+V +Y G L T L + +F I ++V + + DL YVHR
Sbjct: 127 IVTEYMENGSLDTFLRTHD-------GQFTIMQLVGMLRGVGAGMRYLSDLGYVHR---- 175
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAM 200
D+ NVL+D+N +++DFG L D G + +PE +
Sbjct: 176 ------DLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 201 EEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
+ D WS GV M+E+L YGE P++ + + + + + LP+ +G
Sbjct: 230 T-----FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV---EEGYRLPAPMG 278
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G
Sbjct: 128 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWGLA-EFY 176
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
G + NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 177 HPGK-EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+F++ + +Y++ + DL ++S L +D +++I + + A+ +H + +HR
Sbjct: 82 SFENFNEVYIIQEL-MQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVIHR-- 136
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA---------VGTPDY 191
D+KP N+L+++N +++ DFG + S V T Y
Sbjct: 137 --------DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQN 247
+PE++ +Y D WS G + E+ F Y L+ +G I +
Sbjct: 189 RAPEVMLT----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 248 SFDL 251
DL
Sbjct: 245 DNDL 248
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 103 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 152
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 153 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLXEXVATRWYRAPEI---MLN 205
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 206 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 104 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 153
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 154 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLXEXVATRWYRAPEI---MLN 206
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 207 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 103 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 152
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 153 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 205
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 206 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G
Sbjct: 128 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWGLA-EFY 176
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
G + NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 177 HPGK-EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G L
Sbjct: 128 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWG--LAEF 175
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G L
Sbjct: 128 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWG--LAEF 175
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
+ NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 176 YHPGKEYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 99 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 149 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 201
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 202 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G
Sbjct: 128 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWGLA-EFY 176
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
G + NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 177 HPGK-EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G
Sbjct: 128 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWGLA-EFY 176
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
G + NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 177 HPGK-EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 147
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 202
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 235
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 97 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 146
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 147 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 199
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 200 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 101 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 150
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 151 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 203
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 204 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
++Y+V D DL LL +L D +++ +++ + IH + +HR
Sbjct: 120 DVYIVQDL-METDLYKLLKS--QQLSNDHICYFLYQILRGLKYIHSANVLHR-------- 168
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEEG 203
D+KP N+L++ +++ DFG R+ D T V T Y +PEI M
Sbjct: 169 --DLKPSNLLINTTCDLKICDFGLA-RIADPEHDHTGFLTEXVATRWYRAPEI---MLNS 222
Query: 204 RGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 223 KG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 117 KFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDAN-GHIRLADFGSCLRLG 175
++YI E++ A+ H +HR D+KP NV++D +RL D+G
Sbjct: 149 RYYIYELLKALDYCHSQGIMHR----------DVKPHNVMIDHELRKLRLIDWGLA-EFY 197
Query: 176 GDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFY 231
G + NV V + + PE+L +++ Y D WSLG M++ + PF+
Sbjct: 198 HPGK-EYNVRVASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPFF 248
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 136
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 191
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 134
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 81 AFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPN 140
+F++ + +Y++ + DL ++S L +D +++I + + A+ +H + +HR
Sbjct: 82 SFENFNEVYIIQEL-MQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGSNVIHR-- 136
Query: 141 HFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA---------VGTPDY 191
D+KP N+L+++N +++ DFG + S V T Y
Sbjct: 137 --------DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGKIMNHQN 247
+PE++ +Y D WS G + E+ F Y L+ +G I +
Sbjct: 189 RAPEVMLT----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 248 SFDL 251
DL
Sbjct: 245 DNDL 248
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 136
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 191
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 104 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 153
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 154 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 206
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 207 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 105 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 154
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 155 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 207
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 208 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 96 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 145
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 146 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 198
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 199 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 103 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 152
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 153 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 205
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 206 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 139
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 194
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 136
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL-----AYNKF 191
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 97 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 146
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 147 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 199
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 200 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 134
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 139
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 194
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 101 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 150
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 151 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 203
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 204 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 135
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESL-----AYNKF 190
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 139
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 194
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 227
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 134
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 134
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 189
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 107 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 156
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 157 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 209
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 210 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 99 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 149 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 201
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 202 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 33/176 (18%)
Query: 90 LVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASI-------HDLHYVHRPNHF 142
+V +Y G L T L + +F I ++V + + DL YVHR
Sbjct: 127 IVTEYMENGSLDTFLRTHD-------GQFTIMQLVGMLRGVGAGMRYLSDLGYVHR---- 175
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
D+ NVL+D+N +++DFG L D + A T P TA E
Sbjct: 176 ------DLAARNVLVDSNLVCKVSDFGLSRVLEDD----PDAAYTTTGGKIPIRWTAPEA 225
Query: 203 GRGR-YGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVG 256
R + D WS GV M+E+L YGE P++ + + + + + LP+ +G
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV---EEGYRLPAPMG 278
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA-----MEYLEKKNF----IH 138
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNKF 193
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 119 KDVYIVQDL-METDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 168
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 169 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 221
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 222 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 132
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L ++
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESL-----AYNKF 187
Query: 208 GPECDWWSLGVCMYEM-LYGETPF 230
+ D W+ GV ++E+ YG +P+
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 28/250 (11%)
Query: 34 VLYDECCNSSLRREKTVSDFIEFVAK-----LREERDVLV-YGDRRWITNLHYAFQDDSN 87
VL LR + + E+ +K E +VL G I NL A +
Sbjct: 38 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 97
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLA-IASIHDLHY---VHRPNHFA 143
LYL ++Y G+LL L K R+ E F IA + ++S LH+ V R +
Sbjct: 98 LYLAIEYAPHGNLLDFLRK--SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL 155
Query: 144 FH---LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAM 200
+ R++ N+L+ N ++ADFG L G + V+ + +++ E L
Sbjct: 156 SQKQFIHRNLAARNILVGENYVAKIADFG--LSRGQEVYVKKTMGRLPVRWMAIESLNY- 212
Query: 201 EEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
Y D WS GV ++E++ G TP+ + E Y K+ + L +
Sbjct: 213 ----SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL---PQGYRLEKPLN--C 263
Query: 260 SDDAKDLMRR 269
D+ DLMR+
Sbjct: 264 DDEVYDLMRQ 273
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 79 HYAFQDDSNLYLVMDY-YCGGDLLTLLSKFEDR-LPEDMAKFYIAEMVLAIASIHDLHYV 136
H+ + + +++VM + G +LL L+ K+E R +P K +++L L Y+
Sbjct: 94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG------LDYM 147
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANG------HIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
HR + DIKP+NVL++ I++AD G+ T ++ T +
Sbjct: 148 HRRCGI---IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT----NSIQTRE 200
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y SPE+L G G D WS ++E++ G+ F
Sbjct: 201 YRSPEVLLGAPWGCG-----ADIWSTACLIFELITGDFLF 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 23/195 (11%)
Query: 38 ECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG 97
+ N + + + F V LR+ R V + L + L +V + G
Sbjct: 36 KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEG 87
Query: 98 GDLLTLLSKFEDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVL 156
L L E KF + +++ +A + + Y+H + + RD+K +N+
Sbjct: 88 SSLYHHLHIIE-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIF 136
Query: 157 LDANGHIRLADFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWS 215
L + +++ DFG + + G+ Q G+ +++PE++ + + Y + D ++
Sbjct: 137 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYA 194
Query: 216 LGVCMYEMLYGETPF 230
G+ +YE++ G+ P+
Sbjct: 195 FGIVLYELMTGQLPY 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y+V +Y G+LL L + E++ + M I+S + Y+ + N +
Sbjct: 103 FYIVTEYMPYGNLLDYLRECNR---EEVTAVVLLYMATQISSA--MEYLEKKNF----IH 153
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+ N L+ N +++ADFG + GD A + +PE L +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL-----AYNTF 208
Query: 208 GPECDWWSLGVCMYEM-LYGETPFYAESLVETY 239
+ D W+ GV ++E+ YG +P+ L + Y
Sbjct: 209 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 241
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 48 KTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKF 107
+ + F V LR+ R V + L + L +V + G L L
Sbjct: 66 QQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEGSSLYHHLHII 117
Query: 108 EDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
E KF + +++ +A + + Y+H + + RD+K +N+ L + +++
Sbjct: 118 E-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIFLHEDLTVKIG 166
Query: 167 DFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLY 225
DFG + + G+ Q G+ +++PE++ + + Y + D ++ G+ +YE++
Sbjct: 167 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYAFGIVLYELMT 224
Query: 226 GETPF 230
G+ P+
Sbjct: 225 GQLPY 229
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 79 HYAFQDDSNLYLVMDY-YCGGDLLTLLSKFEDR-LPEDMAKFYIAEMVLAIASIHDLHYV 136
H+ + + +++VM + G +LL L+ K+E R +P K +++L L Y+
Sbjct: 94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG------LDYM 147
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANG------HIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
HR + DIKP+NVL++ I++AD G+ T ++ T +
Sbjct: 148 HRRCGI---IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT----NSIQTRE 200
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y SPE+L G G D WS ++E++ G+ F
Sbjct: 201 YRSPEVLLGAPWGCG-----ADIWSTACLIFELITGDFLF 235
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
++Y+V D DL LL L D +++ +++ + IH + +HR
Sbjct: 103 KDVYIVQDL-METDLYKLLKC--QHLSNDHICYFLYQILRGLKYIHSANVLHR------- 152
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGG---DGTVQSNVAVGTPDYISPEILTAMEE 202
D+KP N+LL+ +++ DFG R+ D T V T Y +PEI M
Sbjct: 153 ---DLKPSNLLLNTTCDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAPEI---MLN 205
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
+G Y D WS+G + EML F + ++ I+
Sbjct: 206 SKG-YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 48 KTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKF 107
+ + F V LR+ R V + L + L +V + G L L
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNIL--------LFMGYSTKPQLAIVTQWCEGSSLYHHLHII 125
Query: 108 EDRLPEDMAKFYIAEMV-LAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
E KF + +++ +A + + Y+H + + RD+K +N+ L + +++
Sbjct: 126 E-------TKFEMIKLIDIARQTAQGMDYLHAKSI----IHRDLKSNNIFLHEDLTVKIG 174
Query: 167 DFG-SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLY 225
DFG + + G+ Q G+ +++PE++ + + Y + D ++ G+ +YE++
Sbjct: 175 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD--KNPYSFQSDVYAFGIVLYELMT 232
Query: 226 GETPF 230
G+ P+
Sbjct: 233 GQLPY 237
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 46 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 105
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 106 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 158
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 159 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 208
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 209 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
Y++ ++ G+LL L + + + Y+A + + + Y+ + N +
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA-----MEYLEKKNF----IH 132
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N +++ADFG + GD T ++ P + +PE L +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGD-TFTAHAGAKFPIKWTAPESL-----AYNK 186
Query: 207 YGPECDWWSLGVCMYEM-LYGETPF 230
+ + D W+ GV ++E+ YG +P+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 56 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 115
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 168
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 169 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 218
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 219 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 253
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 74 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 127
Query: 107 FEDRLPEDMAKFYIAEMVLAIASIHDL----HYVHRP-NHFAFHLC--RDIKPDNVLLDA 159
R P F + S DL + V R + A C RD+ NVL+
Sbjct: 128 --RRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
Query: 160 NGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGV 218
+ +++ADFG + + P +++PE L Y + D WS GV
Sbjct: 186 DNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFGV 240
Query: 219 CMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 241 LLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 29/130 (22%)
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA-------------NGHIRLA 166
+ ++ +A +H L +HR D+KP N+L+ N I ++
Sbjct: 121 LRQIASGVAHLHSLKIIHR----------DLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 167 DFGSCLRL-GGDGTVQSNV--AVGTPDYISPEILTAME--EGRGRYGPECDWWSLGVCMY 221
DFG C +L G + ++N+ GT + +PE+L + + R D +S+G Y
Sbjct: 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 222 EML-YGETPF 230
+L G+ PF
Sbjct: 231 YILSKGKHPF 240
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 32/170 (18%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS-- 129
I L + +V +Y G L + L K + A+F + + M+ IAS
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGM 131
Query: 130 --IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVG 187
+ D+ YVHR D+ N+L+++N +++DFG L D G
Sbjct: 132 KYLSDMGYVHR----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 188 TPD--YISPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ SPE + ++ D WS G+ ++E M YGE P++ S
Sbjct: 182 KIPIRWTSPEAIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA-----------VGTPDYISPEI 196
RD+KP N+ + +++ DFG + D Q+ + VGT Y+SPE
Sbjct: 188 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQ 247
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
+ Y + D +SLG+ ++E+LY
Sbjct: 248 IHG-----NNYSHKVDIFSLGLILFELLYS 272
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 29/128 (22%)
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA-------------NGHIRLA 166
+ ++ +A +H L +HR D+KP N+L+ N I ++
Sbjct: 139 LRQIASGVAHLHSLKIIHR----------DLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 167 DFGSCLRL-GGDGTVQSNV--AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
DFG C +L G + N+ GT + +PE+L E + R D +S+G Y +
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE--ESTKRRLTRSIDIFSMGCVFYYI 246
Query: 224 L-YGETPF 230
L G+ PF
Sbjct: 247 LSKGKHPF 254
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 59 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 110
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 111 -QARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 224
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 225 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 266
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 29/128 (22%)
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA-------------NGHIRLA 166
+ ++ +A +H L +HR D+KP N+L+ N I ++
Sbjct: 139 LRQIASGVAHLHSLKIIHR----------DLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 167 DFGSCLRL-GGDGTVQSNV--AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
DFG C +L G + N+ GT + +PE+L E + R D +S+G Y +
Sbjct: 189 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLE--ESTKRRLTRSIDIFSMGCVFYYI 246
Query: 224 L-YGETPF 230
L G+ PF
Sbjct: 247 LSKGKHPF 254
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 52 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 111
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG R D
Sbjct: 112 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYT 160
Query: 182 SNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S+V P + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 161 SSVGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA-----------VGTPDYISPEI 196
RD+KP N+ + +++ DFG + D Q+ + VGT Y+SPE
Sbjct: 142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ 201
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAE 233
+ Y + D +SLG+ ++E+LY PF +
Sbjct: 202 IHG-----NSYSHKVDIFSLGLILFELLY---PFSTQ 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 16/170 (9%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 53 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 112
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG + D
Sbjct: 113 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 162
Query: 182 SNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S + + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 163 SRGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 48 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 107
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG R D
Sbjct: 108 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYT 156
Query: 182 SNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S+V P + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 157 SSVGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 63 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 114
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 115 -QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 173
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 174 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 228
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 229 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 270
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 119 YIAE-MVLAIASIHD----LHYVHRP--NHFAFHLCRDIKPDNVLLDANGHIRLADFGSC 171
+IAE M +A +H+ L H+P +H RDIK NVLL N +ADFG
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISH------RDIKSKNVLLKNNLTACIADFGLA 178
Query: 172 LRL-GGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
L+ G ++ VGT Y++PE+L + D +++G+ ++E+
Sbjct: 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 66 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 117
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 118 -QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 176
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 177 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 231
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 232 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 273
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 74 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 125
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 126 -QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 184
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 185 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 239
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 240 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 59 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 118
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG R D
Sbjct: 119 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYT 167
Query: 182 SNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S+V P + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 168 SSVGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG R D
Sbjct: 128 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYT 176
Query: 182 SNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S+V P + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 177 SSVGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 53 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 112
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG R D
Sbjct: 113 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYT 161
Query: 182 SNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S+V P + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 162 SSVGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 67 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 118
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 119 -QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 177
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 178 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 232
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 233 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
I +L + +V +Y G L T L K + + + + + + D+
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YI 192
YVHR D+ N+L+++N +++DFG L D G +
Sbjct: 145 YVHR----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 194
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFY 231
+PE + ++ D WS G+ M+E++ YGE P++
Sbjct: 195 APEAIAFR-----KFTSASDVWSYGIVMWEVVSYGERPYW 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 74 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 125
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 126 -QARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 184
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 185 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 239
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 240 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 115 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 166
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 167 -QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 225
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 280
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 281 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 322
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+LV DY+ G L L+++ + E M K ++ +A +H + V A
Sbjct: 113 TQLWLVSDYHEHGSLFDYLNRYTVTV-EGMIKLALS-TASGLAHLH-MEIVGTQGKPAI- 168
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG---TVQSNVAVGTPDYISPEIL 197
RD+K N+L+ NG +AD G +R + N VGT Y++PE+L
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+LV DY+ G L L+++ + E M K ++ +A +H + V A
Sbjct: 77 TQLWLVSDYHEHGSLFDYLNRYTVTV-EGMIKLALS-TASGLAHLH-MEIVGTQGKPAI- 132
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG---TVQSNVAVGTPDYISPEIL 197
RD+K N+L+ NG +AD G +R + N VGT Y++PE+L
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
Query: 104 LSKFEDRLPEDMAKFYIAEMVLAIAS----IHDLHYVHRPNHFAFHLCRDIKPDNVLLDA 159
L KF + + + M+ IA+ + +++YVHR D+ N+L+++
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHR----------DLAARNILVNS 182
Query: 160 NGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPEILTAMEEGRGRYGPECDWWSLG 217
N +++DFG L D + G + +PE ++ ++ D WS G
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR-----KFTSASDVWSFG 237
Query: 218 VCMYE-MLYGETPFYAESLVETYGKIMNHQNSFDLPS 253
+ M+E M YGE P++ S E I + F LP+
Sbjct: 238 IVMWEVMTYGERPYWELSNHEVMKAI---NDGFRLPT 271
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK +SD I + ++ + G + I NL A D LY++++Y G+L L
Sbjct: 74 EKDLSDLISEMEMMK------MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL-- 125
Query: 107 FEDRLPEDMAKFY-----IAEMVLAIASIHDLHYVHRP-NHFAFHLC--RDIKPDNVLLD 158
+ R P + Y E + + + + V R + A C RD+ NVL+
Sbjct: 126 -QAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 184
Query: 159 ANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLG 217
+ +++ADFG + + P +++PE L Y + D WS G
Sbjct: 185 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR-----IYTHQSDVWSFG 239
Query: 218 VCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
V ++E+ G +P Y VE K++ + D PS+ E+
Sbjct: 240 VLLWEIFTLGGSP-YPGVPVEELFKLLKEGHRMDKPSNCTNEL 281
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+LV DY+ G L L+++ + E M K ++ +A +H + V A
Sbjct: 80 TQLWLVSDYHEHGSLFDYLNRYTVTV-EGMIKLALS-TASGLAHLH-MEIVGTQGKPAI- 135
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG---TVQSNVAVGTPDYISPEIL 197
RD+K N+L+ NG +AD G +R + N VGT Y++PE+L
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 18/171 (10%)
Query: 62 EERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIA 121
EE V++ + L+ ++++ +Y G LL L + R
Sbjct: 68 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK 127
Query: 122 EMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ 181
++ A+ + ++HR D+ N L++ G ++++DFG R D
Sbjct: 128 DVCEAMEYLESKQFLHR----------DLAARNCLVNDQGVVKVSDFGLS-RYVLDDEET 176
Query: 182 SNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
S+V P + PE+L ++ + D W+ GV M+E+ G+ P+
Sbjct: 177 SSVGSKFPVRWSPPEVLMY-----SKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+LV DY+ G L L+++ + E M K ++ +A +H + V A
Sbjct: 100 TQLWLVSDYHEHGSLFDYLNRYTVTV-EGMIKLALS-TASGLAHLH-MEIVGTQGKPAI- 155
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG---TVQSNVAVGTPDYISPEIL 197
RD+K N+L+ NG +AD G +R + N VGT Y++PE+L
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+LV DY+ G L L+++ + E M K ++ +A +H + V A
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNRYTVTV-EGMIKLALS-TASGLAHLH-MEIVGTQGKPAI- 129
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG---TVQSNVAVGTPDYISPEIL 197
RD+K N+L+ NG +AD G +R + N VGT Y++PE+L
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V +Y G L + L K + A+F + + M+ IAS + D+ +VH
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGFVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+LV DY+ G L L+++ + E M K ++ +A +H + V A
Sbjct: 75 TQLWLVSDYHEHGSLFDYLNRYTVTV-EGMIKLALS-TASGLAHLH-MEIVGTQGKPAI- 130
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG---TVQSNVAVGTPDYISPEIL 197
RD+K N+L+ NG +AD G +R + N VGT Y++PE+L
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 41/155 (26%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
Q + ++ LVM+Y G L L + L + + + ++ +A +H HY+HR
Sbjct: 83 QGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL--LFAQQICEGMAYLHAQHYIHRA--- 137
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
+ NVLLD + +++ DFG +A P+ E E+
Sbjct: 138 -------LAARNVLLDNDRLVKIGDFG--------------LAKAVPE--GHEYYRVRED 174
Query: 203 GRGR---YGPEC----------DWWSLGVCMYEML 224
G Y PEC D WS GV +YE+L
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 75 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 130
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 131 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 179
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 180 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 129
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 130 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 178
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 179 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 41/155 (26%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHF 142
Q + ++ LVM+Y G L L + L + + + ++ +A +H HY+HR
Sbjct: 82 QGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL--LFAQQICEGMAYLHAQHYIHRA--- 136
Query: 143 AFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEE 202
+ NVLLD + +++ DFG +A P+ E E+
Sbjct: 137 -------LAARNVLLDNDRLVKIGDFG--------------LAKAVPE--GHEYYRVRED 173
Query: 203 GRGR---YGPEC----------DWWSLGVCMYEML 224
G Y PEC D WS GV +YE+L
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 129
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 130 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDAEXTAREGAKFPIKWTA 178
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 179 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 76 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 131
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 132 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 180
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 181 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 79 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 134
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 135 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIKWTA 183
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 184 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 80 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 135
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 136 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 184
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 185 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 80 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 135
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 136 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIKWTA 184
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 185 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+++Y+V +Y DL +L + L E+ A+ ++ +++ + IH + +HR
Sbjct: 95 NSVYIVQEY-METDLANVLE--QGPLLEEHARLFMYQLLRGLKYIHSANVLHR------- 144
Query: 146 LCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGTVQSNVAVG--TPDYISPEILTAMEE 202
D+KP N+ ++ + ++ DFG + + + +++ G T Y SP +L +
Sbjct: 145 ---DLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS--- 198
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 243
Y D W+ G EML G+T F +E I+
Sbjct: 199 -PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 83 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 138
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 139 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 187
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 188 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 82 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 137
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 138 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 186
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 187 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 129
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 130 YIHR----------DLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTA 178
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 179 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 74 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 129
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 130 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEXTAREGAKFPIKWTA 178
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 179 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 69 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 124
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 125 YIHR----------DLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKFPIKWTA 173
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 174 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 149 DIKPDNVLLDANGH--IRLADFGS-CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+KP+N+LL G I++ DFGS C + + + Y +PE++
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFGSSCYE-----HQRVYTXIQSRFYRAPEVILG-----A 274
Query: 206 RYGPECDWWSLGVCMYEMLYG 226
RYG D WSLG + E+L G
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 149 DIKPDNVLLDANGH--IRLADFGS-CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+KP+N+LL G I++ DFGS C + + + Y +PE++
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFGSSCYE-----HQRVYTXIQSRFYRAPEVILG-----A 274
Query: 206 RYGPECDWWSLGVCMYEMLYG 226
RYG D WSLG + E+L G
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 27/158 (17%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLS-----KFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
YA +Y++ +Y G L+ L K DMA A++ +A I + +
Sbjct: 84 YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA----AQIAEGMAFIEERN 139
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYIS 193
Y+HR D++ N+L+ ++ADFG RL D + P + +
Sbjct: 140 YIHR----------DLRAANILVSDTLSCKIADFG-LARLIEDNEYTAREGAKFPIKWTA 188
Query: 194 PEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
PE + G + + D WS G+ + E++ +G P+
Sbjct: 189 PEAINY-----GTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS----I 130
I +L + ++ +Y G L L K + R + M+ I S +
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF----TVIQLVGMLRGIGSGMKYL 132
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
D+ YVHR D+ N+L+++N +++DFG L D G
Sbjct: 133 SDMSYVHR----------DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 191 --YISPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFY 231
+ +PE + ++ D WS G+ M+E M YGE P++
Sbjct: 183 IRWTAPEAIAYR-----KFTSASDVWSYGIVMWEVMSYGERPYW 221
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 13/143 (9%)
Query: 90 LVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC- 147
LV Y G + + L + E + P D K +A+ S L Y+H +H +
Sbjct: 112 LVYPYMANGSVASCLRERPESQPPLDWPK----RQRIALGSARGLAYLH--DHCDPKIIH 165
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRY 207
RD+K N+LLD + DFG + GT +I+PE L+ G+
Sbjct: 166 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLST-----GKS 220
Query: 208 GPECDWWSLGVCMYEMLYGETPF 230
+ D + GV + E++ G+ F
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAF 243
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 149 DIKPDNVLLDANGH--IRLADFGS-CLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+KP+N+LL G I++ DFGS C + + + Y +PE++
Sbjct: 225 DLKPENILLKQQGRSGIKVIDFGSSCYE-----HQRVYXXIQSRFYRAPEVILG-----A 274
Query: 206 RYGPECDWWSLGVCMYEMLYG 226
RYG D WSLG + E+L G
Sbjct: 275 RYGMPIDMWSLGCILAELLTG 295
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 26/164 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS----I 130
I +L + ++ +Y G L L K + R + M+ I S +
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF----TVIQLVGMLRGIGSGMKYL 126
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
D+ YVHR D+ N+L+++N +++DFG L D G
Sbjct: 127 SDMSYVHR----------DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 191 --YISPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFY 231
+ +PE + ++ D WS G+ M+E M YGE P++
Sbjct: 177 IRWTAPEAIAYR-----KFTSASDVWSYGIVMWEVMSYGERPYW 215
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 29/130 (22%)
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDA-------------NGHIRLA 166
+ ++ +A +H L +HR D+KP N+L+ N I ++
Sbjct: 121 LRQIASGVAHLHSLKIIHR----------DLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 167 DFGSCLRL-GGDGTVQSNV--AVGTPDYISPEILTAME--EGRGRYGPECDWWSLGVCMY 221
DFG C +L G + N+ GT + +PE+L + + R D +S+G Y
Sbjct: 171 DFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 222 EML-YGETPF 230
+L G+ PF
Sbjct: 231 YILSKGKHPF 240
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N I+++DFG R D S+ P + SPE+ + R
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSF-----SR 178
Query: 207 YGPECDWWSLGVCMYEMLY-GETPF 230
Y + D WS GV M+E+ G+ P+
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPY 203
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N I+++DFG R D S+ P + SPE+ + R
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSF-----SR 180
Query: 207 YGPECDWWSLGVCMYEMLY-GETPF 230
Y + D WS GV M+E+ G+ P+
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPY 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N I+++DFG R D S+ P + SPE+ + R
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSF-----SR 180
Query: 207 YGPECDWWSLGVCMYEMLY-GETPF 230
Y + D WS GV M+E+ G+ P+
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPY 205
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 74/193 (38%), Gaps = 31/193 (16%)
Query: 73 RWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPE---DMAKFYIAEMVLAIAS 129
R I L + L+L+ +Y L K+ D+ P+ + K ++ +++ +
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 130 IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH-----IRLADFGSCLRLGGDGTVQSNV 184
H +HR D+KP N+LL + +++ DFG R G Q
Sbjct: 148 CHSRRCLHR----------DLKPQNLLLSVSDASETPVLKIGDFG-LARAFGIPIRQFTH 196
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 244
+ T Y PEIL G Y D WS+ EML F +S ++ KI
Sbjct: 197 EIITLWYRPPEILL----GSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF- 251
Query: 245 HQNSFDLPSDVGY 257
LP D +
Sbjct: 252 --EVLGLPDDTTW 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N I+++DFG R D S+ P + SPE+ + R
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSF-----SR 183
Query: 207 YGPECDWWSLGVCMYEMLY-GETPF 230
Y + D WS GV M+E+ G+ P+
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPY 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N I+++DFG R D S+ P + SPE+ + R
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSF-----SR 181
Query: 207 YGPECDWWSLGVCMYEMLY-GETPF 230
Y + D WS GV M+E+ G+ P+
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPY 206
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 47 EKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSK 106
EK DF+ E ++ D + +L + + ++ ++ G L + L +
Sbjct: 75 EKQRRDFLS-------EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 107 FEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLA 166
+ + + + + + D++YVHR D+ N+L+++N +++
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHR----------DLAARNILVNSNLVCKVS 177
Query: 167 DFGSCLRL---GGDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYE 222
DFG L D T S + P + +PE + ++ D WS G+ M+E
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR-----KFTSASDVWSYGIVMWE 232
Query: 223 -MLYGETPFY 231
M YGE P++
Sbjct: 233 VMSYGERPYW 242
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
RD+ N L+ N I+++DFG R D S+ P + SPE+ + R
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASPEVFSF-----SR 200
Query: 207 YGPECDWWSLGVCMYEMLY-GETPF 230
Y + D WS GV M+E+ G+ P+
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPY 225
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 89 YLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
++++ Y C GDLL + S + +D+ F + ++ + + + +VHR
Sbjct: 99 HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARGMEYLAEQKFVHR--------- 148
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYIS-PEILTAMEEGRG- 205
D+ N +LD + +++ADFG L D + +V + P TA+E +
Sbjct: 149 -DLAARNCMLDESFTVKVADFG----LARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 206 RYGPECDWWSLGVCMYEMLYGETPFY 231
R+ + D WS GV ++E+L P Y
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V + G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 26/138 (18%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ----SNVAVGTPDYISPEIL--TAME 201
RD+K N+L+ NG +AD G + + T Q +N VGT Y++PE+L T
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 202 EGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF--DLPSDVGYEI 259
+ Y D W+ G+ ++E+ A +V G + +++ F +P+D +E
Sbjct: 196 DCFDSY-KRVDIWAFGLVLWEV--------ARRMVSN-GIVEDYKPPFYDVVPNDPSFED 245
Query: 260 SDDAKDLMRRLICSSDTR 277
MR+++C R
Sbjct: 246 -------MRKVVCVDQQR 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 29 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 88
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V + G L + L K + A+F + + M+ IAS + D+ YVH
Sbjct: 89 SKPVMIVTEXMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 142 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 191
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 192 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 26/138 (18%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQ----SNVAVGTPDYISPEIL--TAME 201
RD+K N+L+ NG +AD G + + T Q +N VGT Y++PE+L T
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQV 195
Query: 202 EGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSF--DLPSDVGYEI 259
+ Y D W+ G+ ++E+ A +V G + +++ F +P+D +E
Sbjct: 196 DCFDSY-KRVDIWAFGLVLWEV--------ARRMVSN-GIVEDYKPPFYDVVPNDPSFED 245
Query: 260 SDDAKDLMRRLICSSDTR 277
MR+++C R
Sbjct: 246 -------MRKVVCVDQQR 256
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 22/193 (11%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
LYLV + DL ++ + ++++ ++L + +H+ VHR
Sbjct: 108 KLYLVTEL-MRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHR-------- 158
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA--VGTPDYISPEILTAMEEGR 204
D+ P N+LL N I + DF L + T +N V Y +PE++ +
Sbjct: 159 --DLHPGNILLADNNDITICDFN----LAREDTADANKTHYVTHRWYRAPELVMQFKG-- 210
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAK 264
+ D WS G M EM + F + KI+ + + DV S A+
Sbjct: 211 --FTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI-EDVVMFSSPSAR 267
Query: 265 DLMRRLICSSDTR 277
D +R + + R
Sbjct: 268 DYLRNSLSNVPAR 280
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 76/193 (39%), Gaps = 22/193 (11%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
LYLV + DL ++ + ++++ ++L + +H+ VHR
Sbjct: 108 KLYLVTEL-MRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHR-------- 158
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVA--VGTPDYISPEILTAMEEGR 204
D+ P N+LL N I + DF L + T +N V Y +PE++ +
Sbjct: 159 --DLHPGNILLADNNDITICDFN----LAREDTADANKTHYVTHRWYRAPELVMQFKG-- 210
Query: 205 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDAK 264
+ D WS G M EM + F + KI+ + + DV S A+
Sbjct: 211 --FTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI-EDVVMFSSPSAR 267
Query: 265 DLMRRLICSSDTR 277
D +R + + R
Sbjct: 268 DYLRNSLSNVPAR 280
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGT---VQSNVAVGTPDYISPEIL--TAMEE 202
RD+K N+L+ NG +AD G + V +N VGT Y++PE+L T +
Sbjct: 166 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVD 225
Query: 203 GRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHQNSFD-LPSDVGYEISD 261
Y D W+ G+ ++E+ + +VE Y +D +P+D +E
Sbjct: 226 CFDSY-KRVDIWAFGLVLWEV---ARRMVSNGIVEDYKPPF-----YDVVPNDPSFED-- 274
Query: 262 DAKDLMRRLICSSDTR 277
MR+++C R
Sbjct: 275 -----MRKVVCVDQQR 285
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 41/127 (32%)
Query: 136 VHRPNHFAFHLCR-------------DIKPDNVLLDANGH-------------------I 163
+H+ H AF LC+ D+KP+N+L + + +
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAV 195
Query: 164 RLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
R+ DFGS D S + V T Y +PE++ +E G + CD WS+G ++E
Sbjct: 196 RVVDFGSA---TFDHEHHSTI-VSTRHYRAPEVI--LELG---WSQPCDVWSIGCIIFEY 246
Query: 224 LYGETPF 230
G T F
Sbjct: 247 YVGFTLF 253
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 66/271 (24%)
Query: 20 GRVFSIETL-----LDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRW 74
G+VF E D +LV ++S K E + L+ E V YG
Sbjct: 27 GKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYG---- 82
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKF--------EDRLPEDMAK---FYIAEM 123
+ L +V +Y GDL L E P ++ + +IA+
Sbjct: 83 ------VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 124 VLA-IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSC--------LRL 174
+ A + + H+VHR D+ N L+ N +++ DFG R+
Sbjct: 137 IAAGMVYLASQHFVHR----------DLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 175 GGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAE 233
GG + ++ PE + ++ E D WSLGV ++E+ YG+ P+Y
Sbjct: 187 GGHTMLPIR-------WMPPESIMYR-----KFTTESDVWSLGVVLWEIFTYGKQPWYQL 234
Query: 234 SLVE-----TYGKIMNHQNSFDLPSDVGYEI 259
S E T G+++ Q P +V YE+
Sbjct: 235 SNNEVIECITQGRVL--QRPRTCPQEV-YEL 262
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 112/286 (39%), Gaps = 59/286 (20%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
D +++ K+ + E A + E + + G I NL A + ++ +Y C
Sbjct: 66 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 97 GGDLLTLLSK-------FEDRLPEDMAKF--YIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
GDLL L + ED P ++ + +++ +A + + +H
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIH---------- 175
Query: 148 RDIKPDNVLLDANGHI-RLADFGSCLRLGGDGT--VQSNVAVGTPDYISPEILTAMEEGR 204
RD+ NVLL NGH+ ++ DFG + D V+ N + +++PE +
Sbjct: 176 RDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDC---- 229
Query: 205 GRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISDDA 263
Y + D WS G+ ++E+ G P Y I+ + + L D GY+++
Sbjct: 230 -VYTVQSDVWSYGILLWEIFSLGLNP---------YPGILVNSKFYKLVKD-GYQMA--- 275
Query: 264 KDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
Q A ++S + ++ P + P FQ I
Sbjct: 276 ----------------QPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 113/289 (39%), Gaps = 65/289 (22%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
D +++ K+ + E A + E + + G I NL A + ++ +Y C
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 97 GGDLLTLLSK-------FEDRLP---EDMAKF--YIAEMVLAIASIHDLHYVHRPNHFAF 144
GDLL L + ED P D+ F +A+ + +AS + +H
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIH---------- 183
Query: 145 HLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGT--VQSNVAVGTPDYISPEILTAME 201
RD+ NVLL NGH+ ++ DFG + D V+ N + +++PE +
Sbjct: 184 ---RDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIFDC- 237
Query: 202 EGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEIS 260
Y + D WS G+ ++E+ G P Y I+ + + L D GY+++
Sbjct: 238 ----VYTVQSDVWSYGILLWEIFSLGLNP---------YPGILVNSKFYKLVKD-GYQMA 283
Query: 261 DDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
Q A ++S + ++ P + P FQ I
Sbjct: 284 -------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+Y+V +Y G LL L L ++ +A + ++HR
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR--------- 128
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGRGR 206
D+ N L+D + ++++DFG + D V S+V P + +PE+ +
Sbjct: 129 -DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYF-----K 181
Query: 207 YGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSF--DLPSDVGYEI 259
Y + D W+ G+ M+E+ G+ P+ + E K+ + L SD Y+I
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQI 237
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 90 STVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 142
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 143 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 194
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 24/118 (20%)
Query: 123 MVLAIAS----IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRL---G 175
M+ IAS + ++ YVHR D+ N+L+++N +++DFG L
Sbjct: 121 MLRGIASGMRYLAEMSYVHR----------DLAARNILVNSNLVCKVSDFGLSRFLEENS 170
Query: 176 GDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFY 231
D T S++ P + +PE + ++ D WS G+ M+E M +GE P++
Sbjct: 171 SDPTYTSSLGGKIPIRWTAPEAIAFR-----KFTSASDAWSYGIVMWEVMSFGERPYW 223
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 17/191 (8%)
Query: 42 SSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGGDLL 101
L+ E+T ++F + E +++ R + L + LV Y G +
Sbjct: 60 KRLKEERTQGGELQF----QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
Query: 102 TLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC-RDIKPDNVLLDA 159
+ L + E + P D K +A+ S L Y+H +H + RD+K N+LLD
Sbjct: 116 SCLRERPESQPPLDWPK----RQRIALGSARGLAYLH--DHCDPKIIHRDVKAANILLDE 169
Query: 160 NGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVC 219
+ DFG + G +I+PE L+ G+ + D + GV
Sbjct: 170 EFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLST-----GKSSEKTDVFGYGVM 224
Query: 220 MYEMLYGETPF 230
+ E++ G+ F
Sbjct: 225 LLELITGQRAF 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 93 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 145
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 146 ---DLAARNVLVKTPQHVKITDFGRAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 197
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 146 LCRDIKPDNVLLDANGHIRLADFG----SCLRLGGDGTVQSNVAVGTPDYISPEILTAM- 200
L +D+K NV D NG + + DFG S + G + + G +++PEI+ +
Sbjct: 152 LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210
Query: 201 ---EEGRGRYGPECDWWSLGVCMYEMLYGETPFY---AESLVETYGKIMNHQNSFDLPSD 254
EE + + D ++LG YE+ E PF AE+++ G M S
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS---QIG 267
Query: 255 VGYEISD 261
+G EISD
Sbjct: 268 MGKEISD 274
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 91 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 143
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 144 ---DLAARNVLVKTPQHVKITDFGRAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 195
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 89/243 (36%), Gaps = 45/243 (18%)
Query: 23 FSIETLLDILLVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAF 82
+++ D +LV + +L K E + L+ E V YG
Sbjct: 37 YNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYG----------VC 86
Query: 83 QDDSNLYLVMDYYCGGDLLTLLSK-------FEDRLPEDMAKFYIAEMVLAIASIHDLHY 135
D L +V +Y GDL L D P +L IAS
Sbjct: 87 GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM 146
Query: 136 VHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSC--------LRLGGDGTVQSNVAVG 187
V+ + H RD+ N L+ AN +++ DFG R+GG +
Sbjct: 147 VYLASQHFVH--RDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR---- 200
Query: 188 TPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVE-----TYGK 241
++ PE + ++ E D WS GV ++E+ YG+ P++ S E T G+
Sbjct: 201 ---WMPPESIMYR-----KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 252
Query: 242 IMN 244
++
Sbjct: 253 VLE 255
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 91 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 143
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 144 ---DLAARNVLVKTPQHVKITDFGRAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 195
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRL-GGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
RD K NVLL ++ LADFG +R G ++ VGT Y++PE+L +
Sbjct: 147 RDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRD 206
Query: 207 YGPECDWWSLGVCMYEML 224
D +++G+ ++E++
Sbjct: 207 AFLRIDMYAMGLVLWELV 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 24/118 (20%)
Query: 123 MVLAIAS----IHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRL---G 175
M+ IAS + ++ YVHR D+ N+L+++N +++DFG L
Sbjct: 123 MLRGIASGMRYLAEMSYVHR----------DLAARNILVNSNLVCKVSDFGLSRFLEENS 172
Query: 176 GDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFY 231
D T S++ P + +PE + ++ D WS G+ M+E M +GE P++
Sbjct: 173 SDPTETSSLGGKIPIRWTAPEAIAFR-----KFTSASDAWSYGIVMWEVMSFGERPYW 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 33/149 (22%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ + L+M++ G L L K ++++ Y ++ + + YVHR
Sbjct: 98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHR------- 150
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+++ +++ DFG + D D SP
Sbjct: 151 ---DLAARNVLVESEHQVKIGDFGLTKAIETD----KEXXTVKDDRDSPVFW-------- 195
Query: 206 RYGPEC----------DWWSLGVCMYEML 224
Y PEC D WS GV ++E+L
Sbjct: 196 -YAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 33/149 (22%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ + L+M++ G L L K ++++ Y ++ + + YVHR
Sbjct: 86 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHR------- 138
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+++ +++ DFG + D D SP
Sbjct: 139 ---DLAARNVLVESEHQVKIGDFGLTKAIETD----KEXXTVKDDRDSPVFW-------- 183
Query: 206 RYGPEC----------DWWSLGVCMYEML 224
Y PEC D WS GV ++E+L
Sbjct: 184 -YAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 26/164 (15%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIAS----I 130
I +L + ++ +Y G L L K + R + M+ I S +
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF----TVIQLVGMLRGIGSGMKYL 147
Query: 131 HDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD 190
D+ VHR D+ N+L+++N +++DFG L D G
Sbjct: 148 SDMSAVHR----------DLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 191 --YISPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFY 231
+ +PE + ++ D WS G+ M+E M YGE P++
Sbjct: 198 IRWTAPEAIAYR-----KFTSASDVWSYGIVMWEVMSYGERPYW 236
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 90 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 142
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 143 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 194
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 195 RIYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 91 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 143
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 144 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 195
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 89 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 141
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 142 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 193
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 96 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 149 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 200
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 18/160 (11%)
Query: 75 ITNLHYAFQDDSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLH 134
+ +L + +V+++ G L L K + + + + + + D+
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMG 165
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG-TVQSNVAVGTP-DYI 192
YVHR D+ N+L+++N +++DFG + D V + P +
Sbjct: 166 YVHR----------DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWT 215
Query: 193 SPEILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFY 231
+PE + ++ D WS G+ M+E M YGE P++
Sbjct: 216 APEAIQYR-----KFTSASDVWSYGIVMWEVMSYGERPYW 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 93 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 145
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 146 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 197
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 198 RIYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+M G LL + + +D + + ++ + + D VHR
Sbjct: 92 STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 144
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 145 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 196
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
++ LY+V +Y G L+ L S+ L D + ++ A+ + ++VHR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR--- 141
Query: 142 FAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAME 201
D+ NVL+ + +++DFG L + + + + +PE L
Sbjct: 142 -------DLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALR--- 187
Query: 202 EGRGRYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS G+ ++E+ +G P+
Sbjct: 188 --EKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
++ LY+V +Y G L+ L S+ L D + ++ A+ + ++VHR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR--- 126
Query: 142 FAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAME 201
D+ NVL+ + +++DFG L + + + + +PE L
Sbjct: 127 -------DLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALR--- 172
Query: 202 EGRGRYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS G+ ++E+ +G P+
Sbjct: 173 --EKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 21/150 (14%)
Query: 83 QDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
++ LY+V +Y G L+ L S+ L D + ++ A+ + ++VHR
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR--- 313
Query: 142 FAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAME 201
D+ NVL+ + +++DFG L + + + + +PE L
Sbjct: 314 -------DLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALR--- 359
Query: 202 EGRGRYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS G+ ++E+ +G P+
Sbjct: 360 --EKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
+ L+L+ Y+ G L L + L +A +A +H + + H
Sbjct: 79 TQLWLITHYHEHGSLYDFLQR--QTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT----VQSNVAVGTPDYISPEILTAME 201
RD K NVL+ +N +AD G + + G+ + +N VGT Y++PE+L E
Sbjct: 137 --RDFKSRNVLVKSNLQCCIADLGLAV-MHSQGSDYLDIGNNPRVGTKRYMAPEVLD--E 191
Query: 202 EGRGRYGPECDW---WSLGVCMYEM 223
+ R W W+ G+ ++E+
Sbjct: 192 QIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + LV G LL + + RL + ++ ++ + D+ VHR
Sbjct: 91 STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHR------- 143
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGR 204
D+ NVL+ + H+++ DFG L D T P +++ E + R
Sbjct: 144 ---DLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL-----R 195
Query: 205 GRYGPECDWWSLGVCMYE-MLYGETPF 230
R+ + D WS GV ++E M +G P+
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 88/220 (40%), Gaps = 43/220 (19%)
Query: 36 YDECCNSSLR--REKTVSDFIE-----FVAKLRE----ERDVLVYGDRRWITNLHYAFQD 84
+ E C+ L+ +K +S I+ + K R E ++ D I L
Sbjct: 58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 85 DSNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAE---MVLAIAS----IHDLHYVH 137
+ +V + G L + L K + A+F + + M+ IAS + D+ VH
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHD-------AQFTVIQLVGMLRGIASGMKYLSDMGAVH 170
Query: 138 RPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPD--YISPE 195
R D+ N+L+++N +++DFG L D G + SPE
Sbjct: 171 R----------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 196 ILTAMEEGRGRYGPECDWWSLGVCMYE-MLYGETPFYAES 234
+ ++ D WS G+ ++E M YGE P++ S
Sbjct: 221 AIAYR-----KFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S+L LV Y G LL + + L + + ++ + + + VHR
Sbjct: 105 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHR------- 157
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGR 204
++ NVLL + +++ADFG L D TP +++ E +
Sbjct: 158 ---NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF----- 209
Query: 205 GRYGPECDWWSLGVCMYE-MLYGETPFYAESLVET 238
G+Y + D WS GV ++E M +G P+ L E
Sbjct: 210 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 244
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S+L LV Y G LL + + L + + ++ + + + VHR
Sbjct: 87 SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHR------- 139
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTP-DYISPEILTAMEEGR 204
++ NVLL + +++ADFG L D TP +++ E +
Sbjct: 140 ---NLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF----- 191
Query: 205 GRYGPECDWWSLGVCMYE-MLYGETPFYAESLVET 238
G+Y + D WS GV ++E M +G P+ L E
Sbjct: 192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV 226
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 41/122 (33%)
Query: 141 HFAFHLCR-------------DIKPDNVLLD-------------------ANGHIRLADF 168
H A+ LC D+KP+N+L N IR+ADF
Sbjct: 136 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 195
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
GS D + + V T Y PE++ +E G + CD WS+G ++E G T
Sbjct: 196 GSA---TFDHEHHTTI-VATRHYRPPEVI--LELG---WAQPCDVWSIGCILFEYYRGFT 246
Query: 229 PF 230
F
Sbjct: 247 LF 248
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 42/255 (16%)
Query: 33 LVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVM 92
L+ D +++ K + E A + E + + G+ I NL A ++
Sbjct: 70 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 129
Query: 93 DYYCGGDLLTLLSKFEDRL------PEDMA--------------KFYIAEMVLAIASIHD 132
+Y C GDLL L + D P M + +A+ + +AS +
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG--TVQSNVAVGTPD 190
+H RD+ N+LL ++ DFG + D V+ N +
Sbjct: 190 IH-------------RDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPV-K 235
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSF 249
+++PE + Y E D WS G+ ++E+ G +P+ + + K++
Sbjct: 236 WMAPESIF-----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 290
Query: 250 DLPSDVGYEISDDAK 264
P E+ D K
Sbjct: 291 LSPEHAPAEMYDIMK 305
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 41/122 (33%)
Query: 141 HFAFHLCR-------------DIKPDNVLLD-------------------ANGHIRLADF 168
H A+ LC D+KP+N+L N IR+ADF
Sbjct: 159 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 218
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
GS D + + V T Y PE++ +E G + CD WS+G ++E G T
Sbjct: 219 GSA---TFDHEHHTTI-VATRHYRPPEVI--LELG---WAQPCDVWSIGCILFEYYRGFT 269
Query: 229 PF 230
F
Sbjct: 270 LF 271
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 185
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 41/122 (33%)
Query: 141 HFAFHLCR-------------DIKPDNVLLD-------------------ANGHIRLADF 168
H A+ LC D+KP+N+L N IR+ADF
Sbjct: 127 HMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 186
Query: 169 GSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGET 228
GS D + + V T Y PE++ +E G + CD WS+G ++E G T
Sbjct: 187 GSA---TFDHEHHTTI-VATRHYRPPEVI--LELG---WAQPCDVWSIGCILFEYYRGFT 237
Query: 229 PF 230
F
Sbjct: 238 LF 239
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 183
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY----- 189
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 20/128 (15%)
Query: 110 RLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL----DANGHIRL 165
+LP M K + +++ I HY+H ++ H RD+KP N+L+ G +++
Sbjct: 124 QLPRGMVKSLLYQILDGI------HYLH--ANWVLH--RDLKPANILVMGEGPERGRVKI 173
Query: 166 ADFGSCLRLGGDGTVQSNV--AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEM 223
AD G +++ V T Y +PE+L G Y D W++G E+
Sbjct: 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL----GARHYTKAIDIWAIGCIFAEL 229
Query: 224 LYGETPFY 231
L E F+
Sbjct: 230 LTSEPIFH 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 205
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 205
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 189
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 203
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 78 LHYAFQDDSNLYLVMDYYCGGDLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYV 136
L ++ LY+V +Y G L+ L S+ L D + ++ A+ + ++V
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 137 HRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEI 196
HR D+ NVL+ + +++DFG L + + + + +PE
Sbjct: 131 HR----------DLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEA 176
Query: 197 LTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
L + + D WS G+ ++E+ +G P+
Sbjct: 177 LR-----EAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGT--PDYISPEILTAMEEGRG 205
RD+ NVLL + +++DFG L D G + +PE +
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY----- 195
Query: 206 RYGPECDWWSLGVCMYEML-YGETPF 230
++ + D WS GV M+E YG+ P+
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 111/292 (38%), Gaps = 65/292 (22%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
D +++ K+ + E A + E + + G I NL A + ++ +Y C
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 97 GGDLLTLLSKF---------------EDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNH 141
GDLL L + E++L + +++ +A + + +H
Sbjct: 134 YGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIH---- 189
Query: 142 FAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGT--VQSNVAVGTPDYISPEILT 198
RD+ NVLL NGH+ ++ DFG + D V+ N + +++PE +
Sbjct: 190 ------RDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KWMAPESIF 241
Query: 199 AMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGY 257
Y + D WS G+ ++E+ G P Y I+ + + L D GY
Sbjct: 242 DC-----VYTVQSDVWSYGILLWEIFSLGLNP---------YPGILVNSKFYKLVKD-GY 286
Query: 258 EISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
+++ Q A ++S + ++ P + P FQ I
Sbjct: 287 QMA-------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 42/255 (16%)
Query: 33 LVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVM 92
L+ D +++ K + E A + E + + G+ I NL A ++
Sbjct: 63 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 122
Query: 93 DYYCGGDLLTLLSKFEDRL------PEDMA--------------KFYIAEMVLAIASIHD 132
+Y C GDLL L + D P M + +A+ + +AS +
Sbjct: 123 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 182
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG--TVQSNVAVGTPD 190
+H RD+ N+LL ++ DFG + D V+ N +
Sbjct: 183 IH-------------RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV-K 228
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSF 249
+++PE + Y E D WS G+ ++E+ G +P+ + + K++
Sbjct: 229 WMAPESIF-----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 283
Query: 250 DLPSDVGYEISDDAK 264
P E+ D K
Sbjct: 284 LSPEHAPAEMYDIMK 298
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 89 STVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 141
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 142 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 193
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 113/299 (37%), Gaps = 72/299 (24%)
Query: 37 DECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYC 96
D +++ K+ + E A + E + + G I NL A + ++ +Y C
Sbjct: 59 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 118
Query: 97 GGDLLTLLSKFEDRL----------PEDMAK------------FYIAEMVLAIASIHDLH 134
GDLL L + + + PE + K + +++ +A + +
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 135 YVHRPNHFAFHLCRDIKPDNVLLDANGHI-RLADFGSCLRLGGDGT--VQSNVAVGTPDY 191
+H RD+ NVLL NGH+ ++ DFG + D V+ N + +
Sbjct: 179 CIH----------RDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV-KW 226
Query: 192 ISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFD 250
++PE + Y + D WS G+ ++E+ G P Y I+ + +
Sbjct: 227 MAPESIFDC-----VYTVQSDVWSYGILLWEIFSLGLNP---------YPGILVNSKFYK 272
Query: 251 LPSDVGYEISDDAKDLMRRLICSSDTRLGQNGIADFKMWSALFVSLSISPRNHPWFQGI 309
L D GY+++ Q A ++S + ++ P + P FQ I
Sbjct: 273 LVKD-GYQMA-------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 141
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 142 ---DLAARNVLVKTPQHVKITDFGRAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 193
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 91 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 143
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 144 ---DLAARNVLVKTPQHVKITDFGRAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 195
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 42/255 (16%)
Query: 33 LVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVM 92
L+ D +++ K + E A + E + + G+ I NL A ++
Sbjct: 47 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 106
Query: 93 DYYCGGDLLTLLSKFEDRL------PEDMA--------------KFYIAEMVLAIASIHD 132
+Y C GDLL L + D P M + +A+ + +AS +
Sbjct: 107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 166
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG--TVQSNVAVGTPD 190
+H RD+ N+LL ++ DFG + D V+ N +
Sbjct: 167 IH-------------RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV-K 212
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSF 249
+++PE + Y E D WS G+ ++E+ G +P+ + + K++
Sbjct: 213 WMAPESIF-----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 267
Query: 250 DLPSDVGYEISDDAK 264
P E+ D K
Sbjct: 268 LSPEHAPAEMYDIMK 282
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 42/255 (16%)
Query: 33 LVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVM 92
L+ D +++ K + E A + E + + G+ I NL A ++
Sbjct: 65 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 124
Query: 93 DYYCGGDLLTLLSKFEDRL------PEDMA--------------KFYIAEMVLAIASIHD 132
+Y C GDLL L + D P M + +A+ + +AS +
Sbjct: 125 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 184
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG--TVQSNVAVGTPD 190
+H RD+ N+LL ++ DFG + D V+ N +
Sbjct: 185 IH-------------RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV-K 230
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSF 249
+++PE + Y E D WS G+ ++E+ G +P+ + + K++
Sbjct: 231 WMAPESIF-----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 285
Query: 250 DLPSDVGYEISDDAK 264
P E+ D K
Sbjct: 286 LSPEHAPAEMYDIMK 300
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 96 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 149 ---DLAARNVLVKTPQHVKITDFGRAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 200
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 94/255 (36%), Gaps = 42/255 (16%)
Query: 33 LVLYDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVM 92
L+ D +++ K + E A + E + + G+ I NL A ++
Sbjct: 70 LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT 129
Query: 93 DYYCGGDLLTLLSKFEDRL------PEDMA--------------KFYIAEMVLAIASIHD 132
+Y C GDLL L + D P M + +A+ + +AS +
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 133 LHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDG--TVQSNVAVGTPD 190
+H RD+ N+LL ++ DFG + D V+ N +
Sbjct: 190 IH-------------RDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV-K 235
Query: 191 YISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSF 249
+++PE + Y E D WS G+ ++E+ G +P+ + + K++
Sbjct: 236 WMAPESIF-----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 290
Query: 250 DLPSDVGYEISDDAK 264
P E+ D K
Sbjct: 291 LSPEHAPAEMYDIMK 305
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
+ ++ + + + + ++VHR D+ NVLL + +++DFG L D
Sbjct: 475 VHQVSMGMKYLEESNFVHR----------DLAARNVLLVTQHYAKISDFGLSKALRADEN 524
Query: 180 VQSNVAVGT--PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
G + +PE + ++ + D WS GV M+E YG+ P+
Sbjct: 525 YYKAQTHGKWPVKWYAPECINYY-----KFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 120 IAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGT 179
+ ++ + + + + ++VHR D+ NVLL + +++DFG L D
Sbjct: 476 VHQVSMGMKYLEESNFVHR----------DLAARNVLLVTQHYAKISDFGLSKALRADEN 525
Query: 180 VQSNVAVGT--PDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPF 230
G + +PE + ++ + D WS GV M+E YG+ P+
Sbjct: 526 YYKAQTHGKWPVKWYAPECINYY-----KFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 47/220 (21%)
Query: 36 YDECCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRR--WITNLH-YAFQDD----SNL 88
YD+ N ++ +K F + + R R++ + + +I LH +D L
Sbjct: 48 YDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDEL 107
Query: 89 YLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCR 148
Y+V++ DL L K L E K + ++L IH+ +HR
Sbjct: 108 YIVLEI-ADSDLKKLF-KTPIFLTEQHVKTILYNLLLGEKFIHESGIIHR---------- 155
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLGGDGTV------------------------QSNV 184
D+KP N LL+ + +++ DFG + D + Q
Sbjct: 156 DLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 185 AVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
V T Y +PE++ E Y D WS G E+L
Sbjct: 216 HVVTRWYRAPELILLQEN----YTNSIDIWSTGCIFAELL 251
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 83 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 135
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 136 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 187
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 188 RIYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 141
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 142 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 193
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 99 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 151
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 152 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 203
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 204 RIYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 141
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 142 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 193
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV 184
D++P NV++DA H RL DFGS + D + +N+
Sbjct: 364 DVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNL 399
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV 184
D++P NV++DA H RL DFGS + D + +N+
Sbjct: 364 DVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNL 399
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 123 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 175
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 176 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 227
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 228 RIYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 114 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 166
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 167 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 218
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 219 RIYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 95 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 147
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 148 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 199
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 200 RIYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 89 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 141
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 142 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 193
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 194 RIYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 96 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 149 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 200
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 91 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 143
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 144 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 195
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 196 RIYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 92 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 144
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 145 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 196
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 149 DIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNV 184
D++P NV++DA H RL DFGS + D + +N+
Sbjct: 364 DVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNL 399
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 92 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 144
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 145 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 196
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 96 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 148
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 149 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 200
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 201 RIYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 92 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR------- 144
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 145 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 196
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 197 RIYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 80 YAFQDDSNLYLVMDYYCGGDLLTLLSKF----EDRLPEDMAKFYIAEMVLAIASIHDLHY 135
+ FQ+ S LV + Y G LL ++ + E +P+ + + M+ I +HD
Sbjct: 136 HLFQNGS--VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEI 193
Query: 136 VHRPNHFAFHLCRDIKPDNVLL-----------DANGHIRLADFGSC--LRLGGDGTVQS 182
+H DIKPDN +L D + + L D G ++L GT+ +
Sbjct: 194 IH----------GDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFT 243
Query: 183 NVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYG 226
T + E+L+ + + D++ + +Y ML+G
Sbjct: 244 -AKCETSGFQCVEMLS-----NKPWNYQIDYFGVAATVYCMLFG 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 117 KFYIAEMVLA-IASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGHIRLADFGSCLRLG 175
+ IA V A +A + + +VHR D+ N L+ N +++ADFG +
Sbjct: 176 QLCIARQVAAGMAYLSERKFVHR----------DLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 176 GDGTVQSNVAVGTP-DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML-YGETPFY 231
+++ P ++ PE + RY E D W+ GV ++E+ YG P+Y
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIF-----YNRYTTESDVWAYGVVLWEIFSYGLQPYY 278
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 17/147 (11%)
Query: 86 SNLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFH 145
S + L+ G LL + + +D + + ++ + + D VHR
Sbjct: 86 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHR------- 138
Query: 146 LCRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ NVL+ H+++ DFG LG + + + G P A+E
Sbjct: 139 ---DLAARNVLVKTPQHVKITDFGLAKLLGAEEK-EYHAEGGK----VPIKWMALESILH 190
Query: 206 R-YGPECDWWSLGVCMYE-MLYGETPF 230
R Y + D WS GV ++E M +G P+
Sbjct: 191 RIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+ LV G LL + + +D + + + ++ + + + VHR
Sbjct: 90 TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR-------- 141
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+ NVL+ + H+++ DFG L GD + N G P A+E R
Sbjct: 142 --DLAARNVLVKSPNHVKITDFGLARLLEGDEK-EYNADGGK----MPIKWMALECIHYR 194
Query: 207 -YGPECDWWSLGVCMYE-MLYGETPF 230
+ + D WS GV ++E M +G P+
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFGGKPY 220
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 23/134 (17%)
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH-----IRLADFGSCLRLGGD 177
+++AI I + YVH N + RD+KP+N L+ G+ I + DFG
Sbjct: 108 LMIAIQLISRMEYVHSKNL----IYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDP 163
Query: 178 GTV------QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP-- 229
T + GT Y+S E+ R D +LG L G P
Sbjct: 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSR-----RDDLEALGHMFMYFLRGSLPWQ 218
Query: 230 -FYAESLVETYGKI 242
A++L E Y KI
Sbjct: 219 GLKADTLKERYQKI 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 19/225 (8%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 48 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 98 GDLLTLLSKFEDRL------PEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RD 149
G+L T L + PED+ K + + L + A C RD
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDF---LTLEHLICYSFQVAKGMEFLASRKCIHRD 164
Query: 150 IKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGTPDYISPEILTAMEEGRGRYG 208
+ N+LL +++ DFG + D V+ A +++PE + Y
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-----YT 219
Query: 209 PECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
+ D WS GV ++E+ G +P+ + E + + + P
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 23/172 (13%)
Query: 90 LVMDYYCGGDLLTLL--SKFE---DRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAF 144
+++ + GDL T L S+ E +P ++ ++ L + + + +++HR
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHR------ 171
Query: 145 HLCRDIKPDNVLLDANGHIRLADFGSCLRL-GGDGTVQSNVAVGTPDYISPEILTAMEEG 203
D+ N +L + + +ADFG ++ GD Q +A +I+ E L
Sbjct: 172 ----DLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV-- 225
Query: 204 RGRYGPECDWWSLGVCMYEM-LYGETPFYAESLVETYGKIMNHQNSFDLPSD 254
Y + D W+ GV M+E+ G TP+ E Y ++ H + P D
Sbjct: 226 ---YTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL-HGHRLKQPED 273
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 179 TVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 238
+ QS + P +++PE L E R D WS V ++E++ E PF S +E
Sbjct: 162 SFQSPGRMYAPAWVAPEALQKKPEDTNRRS--ADMWSFAVLLWELVTREVPFADLSNMEI 219
Query: 239 YGKIMNHQNSFDLPSDVGYEISDDAKDLM 267
K+ +P + +S K M
Sbjct: 220 GMKVALEGLRPTIPPGISPHVSKLMKICM 248
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 87 NLYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHL 146
+ LV G LL + + +D + + + ++ + + + VHR
Sbjct: 113 TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHR-------- 164
Query: 147 CRDIKPDNVLLDANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
D+ NVL+ + H+++ DFG L GD + N G P A+E R
Sbjct: 165 --DLAARNVLVKSPNHVKITDFGLARLLEGDEK-EYNADGGK----MPIKWMALECIHYR 217
Query: 207 -YGPECDWWSLGVCMYE-MLYGETPF 230
+ + D WS GV ++E M +G P+
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFGGKPY 243
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 86/224 (38%), Gaps = 18/224 (8%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 58 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 117
Query: 98 GDLLTLLSKFED-----RLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RDI 150
G+L T L + + PED+ K + + L + A C RD+
Sbjct: 118 GNLSTYLRSKRNEFVPYKTPEDLYKDF---LTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 151 KPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGTPDYISPEILTAMEEGRGRYGP 209
N+LL +++ DFG + D V+ A +++PE + Y
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-----YTI 229
Query: 210 ECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
+ D WS GV ++E+ G +P+ + E + + + P
Sbjct: 230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 23/134 (17%)
Query: 123 MVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANGH-----IRLADFGSCLRLGGD 177
+++AI + + YVH N + RD+KP+N L+ G+ I + DFG
Sbjct: 100 LMIAIQLLSRMEYVHSKNL----IYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDP 155
Query: 178 GTV------QSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETP-- 229
T + GT Y+S E+ R D +LG L G P
Sbjct: 156 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSR-----RDDLEALGHMFMYFLRGSLPWQ 210
Query: 230 -FYAESLVETYGKI 242
A++L E Y KI
Sbjct: 211 GLKADTLKERYQKI 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 38/213 (17%)
Query: 60 LREERDVLVY-GDRRWITNLHYAFQDDSNLYLVMDYYCG-GDLLTLL----SKFEDRLPE 113
L E +L++ G + NL A +V+ +C G+L T L ++F PE
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 114 DMAK------------FYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLLDANG 161
D+ K F +A+ + +AS +H RD+ N+LL
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIH-------------RDLAARNILLSEKN 185
Query: 162 HIRLADFGSCLRLGGD-GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLGVCM 220
+++ DFG + D V+ A +++PE + Y + D WS GV +
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-----YTIQSDVWSFGVLL 240
Query: 221 YEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
+E+ G +P+ + E + + + P
Sbjct: 241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRL-GGDGTVQSNVAVGTPDYISPEILTAMEEGRGR 206
RD+ N +L + + +ADFG ++ GD Q + +++ E L
Sbjct: 161 RDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESL-----ADNL 215
Query: 207 YGPECDWWSLGVCMYE-MLYGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEISD 261
Y D W+ GV M+E M G+TP+ E Y ++ N P + E+ D
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG-NRLKQPPECMEEVYD 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 145
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 146 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---- 200
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 201 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 254
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 135
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 136 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT---- 190
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 191 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 19/225 (8%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 57 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 98 GDLLTLLSKFEDRL------PEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RD 149
G+L T L + PED+ K + + L + A C RD
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDF---LTLEHLICYSFQVAKGMEFLASRKCIHRD 173
Query: 150 IKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGTPDYISPEILTAMEEGRGRYG 208
+ N+LL +++ DFG + D V+ A +++PE + Y
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-----YT 228
Query: 209 PECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
+ D WS GV ++E+ G +P+ + E + + + P
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 85/225 (37%), Gaps = 19/225 (8%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 48 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 107
Query: 98 GDLLTLLSKFEDRL------PEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RD 149
G+L T L + PED+ K + + L + A C RD
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDF---LTLEHLICYSFQVAKGMEFLASRKCIHRD 164
Query: 150 IKPDNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGTPDYISPEILTAMEEGRGRYG 208
+ N+LL +++ DFG + D V+ A +++PE + Y
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV-----YT 219
Query: 209 PECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
+ D WS GV ++E+ G +P+ + E + + + P
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 188 TPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 242
P +++PE L E R D WS V ++E++ E PF S E K+
Sbjct: 171 APAWVAPEALQKKPEDTNRRS--ADXWSFAVLLWELVTREVPFADLSNXEIGXKV 223
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 139
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 140 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---- 194
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 195 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 248
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 28/101 (27%)
Query: 149 DIKPDNVLLDA-------------------NGHIRLADFGSCLRLGGDGTVQSNVAVGTP 189
D+KP+N+L N I++ DFGS D S + V T
Sbjct: 143 DLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---TYDDEHHSTL-VSTR 198
Query: 190 DYISPEILTAMEEGRGRYGPECDWWSLGVCMYEMLYGETPF 230
Y +PE++ A+ + CD WS+G + E G T F
Sbjct: 199 HYRAPEVILALG-----WSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 89 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 139
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 140 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---- 194
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 195 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 248
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 145
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 146 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---- 200
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 201 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 254
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 135
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 136 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---- 190
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 191 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 37/158 (23%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
LY+V++ DL L K L E+ K + ++L IH+ +HR
Sbjct: 105 LYIVLEI-ADSDLKKLF-KTPIFLTEEHIKTILYNLLLGENFIHESGIIHR--------- 153
Query: 148 RDIKPDNVLLDANGHIRLADFGSCLRLGGD---------------GTVQSNVA------V 186
D+KP N LL+ + +++ DFG + + G N+ V
Sbjct: 154 -DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 187 GTPDYISPEILTAMEEGRGRYGPECDWWSLGVCMYEML 224
T Y +PE++ E Y D WS G E+L
Sbjct: 213 VTRWYRAPELILLQEN----YTKSIDIWSTGCIFAELL 246
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 18/175 (10%)
Query: 88 LYLVMDYYCGGDLLTLLSKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLC 147
+ +V + G LL L K + Y ++ + + ++HR
Sbjct: 85 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------- 135
Query: 148 RDIKPDNVLLDANGHIRLADFG--SCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRG 205
D+ N+LL +++ DFG L D V + +PE L
Sbjct: 136 -DLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT---- 190
Query: 206 RYGPECDWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLPSDVGYEI 259
+ D W GV ++EM YG+ P+ + + KI P D +I
Sbjct: 191 -FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 80/196 (40%), Gaps = 17/196 (8%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCGG 98
C SL R + + +F+ + +D + ++ L + + + +V+ Y G
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHG 116
Query: 99 DLLTLL-SKFEDRLPEDMAKFYIAEMVLAIASIHDLHYVHRPNHFAFHLCRDIKPDNVLL 157
DL + ++ + +D+ F + ++ + + +VHR D+ N +L
Sbjct: 117 DLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHR----------DLAARNCML 165
Query: 158 DANGHIRLADFGSCLRLGGDGTVQSNVAVGTPDYISPEILTAMEEGRGRYGPECDWWSLG 217
D +++ADFG + + G + L +++ ++ + D WS G
Sbjct: 166 DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT--QKFTTKSDVWSFG 223
Query: 218 VCMYEMLYGETPFYAE 233
V ++E++ P Y +
Sbjct: 224 VLLWELMTRGAPPYPD 239
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 86/222 (38%), Gaps = 13/222 (5%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 48 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 98 GDLLTLL-SKFEDRLPEDMAK--FYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RDIKP 152
G+L T L SK + +P +A Y + L + A C RD+
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 167
Query: 153 DNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPEC 211
N+LL +++ DFG + D V+ A +++PE + Y +
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-----YTIQS 222
Query: 212 DWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
D WS GV ++E+ G +P+ + E + + + P
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 86/222 (38%), Gaps = 13/222 (5%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 48 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 98 GDLLTLL-SKFEDRLPEDMAK--FYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RDIKP 152
G+L T L SK + +P +A Y + L + A C RD+
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 167
Query: 153 DNVLLDANGHIRLADFGSCLRLGGDGT-VQSNVAVGTPDYISPEILTAMEEGRGRYGPEC 211
N+LL +++ DFG + D V+ A +++PE + Y +
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-----YTIQS 222
Query: 212 DWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
D WS GV ++E+ G +P+ + E + + + P
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 86/222 (38%), Gaps = 13/222 (5%)
Query: 39 CCNSSLRREKTVSDFIEFVAKLREERDVLVYGDRRWITNLHYAFQDDSNLYLVMDYYCG- 97
C +++ K + E A + E + ++ G + NL A +V+ +C
Sbjct: 57 CRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 98 GDLLTLL-SKFEDRLPEDMAK--FYIAEMVLAIASIHDLHYVHRPNHFAFHLC--RDIKP 152
G+L T L SK + +P +A Y + L + A C RD+
Sbjct: 117 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA 176
Query: 153 DNVLLDANGHIRLADFGSCLRLGGD-GTVQSNVAVGTPDYISPEILTAMEEGRGRYGPEC 211
N+LL +++ DFG + D V+ A +++PE + Y +
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV-----YTIQS 231
Query: 212 DWWSLGVCMYEML-YGETPFYAESLVETYGKIMNHQNSFDLP 252
D WS GV ++E+ G +P+ + E + + + P
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.141 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,522,804
Number of Sequences: 62578
Number of extensions: 492319
Number of successful extensions: 3706
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 517
Number of HSP's that attempted gapping in prelim test: 1461
Number of HSP's gapped (non-prelim): 1065
length of query: 372
length of database: 14,973,337
effective HSP length: 100
effective length of query: 272
effective length of database: 8,715,537
effective search space: 2370626064
effective search space used: 2370626064
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)