Query psy11573
Match_columns 248
No_of_seqs 119 out of 405
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 21:59:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11573.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11573hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uzd_A 14-3-3 protein gamma; s 100.0 2.3E-89 7.9E-94 610.4 22.8 219 14-232 4-241 (248)
2 3ubw_A 14-3-3E, 14-3-3 protein 100.0 4.3E-88 1.5E-92 605.0 24.0 215 13-227 30-261 (261)
3 3iqu_A 14-3-3 protein sigma; s 100.0 1.8E-88 6.2E-93 601.1 20.7 213 13-225 7-236 (236)
4 1o9d_A 14-3-3-like protein C; 100.0 9.4E-87 3.2E-91 597.6 23.1 222 14-235 8-248 (260)
5 2br9_A 14-3-3E, 14-3-3 protein 100.0 5.3E-86 1.8E-90 585.5 24.0 213 14-226 5-234 (234)
6 2npm_A 14-3-3 domain containin 100.0 2E-85 6.9E-90 588.8 24.0 214 13-227 27-260 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 2.3E-82 7.9E-87 569.4 15.3 210 13-230 28-261 (268)
8 2o8p_A 14-3-3 domain containin 100.0 7.8E-75 2.7E-79 510.5 18.8 201 15-222 4-226 (227)
9 3vtx_A MAMA; tetratricopeptide 95.9 0.42 1.4E-05 36.8 14.9 153 18-193 9-169 (184)
10 3u3w_A Transcriptional activat 95.7 0.78 2.7E-05 38.8 17.1 150 16-197 77-228 (293)
11 3sf4_A G-protein-signaling mod 95.6 0.91 3.1E-05 38.7 18.6 185 8-196 3-218 (406)
12 3nf1_A KLC 1, kinesin light ch 95.6 0.75 2.6E-05 37.7 16.8 59 138-197 169-227 (311)
13 3edt_B KLC 2, kinesin light ch 94.8 0.36 1.2E-05 38.8 11.3 59 138-197 143-201 (283)
14 4g1t_A Interferon-induced prot 94.5 1.4 4.6E-05 39.1 15.2 50 138-192 350-399 (472)
15 2qfc_A PLCR protein; TPR, HTH, 94.0 1.5 5.1E-05 37.0 14.0 149 15-195 76-226 (293)
16 4gyw_A UDP-N-acetylglucosamine 93.2 2.7 9.4E-05 41.7 16.3 170 7-200 2-180 (723)
17 4a1s_A PINS, partner of inscut 93.2 3.8 0.00013 35.3 19.6 180 12-196 46-254 (411)
18 3n71_A Histone lysine methyltr 93.1 0.42 1.4E-05 45.5 9.8 58 139-197 368-425 (490)
19 3qwp_A SET and MYND domain-con 92.9 0.2 6.7E-06 46.8 7.0 58 139-197 346-403 (429)
20 3qww_A SET and MYND domain-con 92.2 0.28 9.6E-06 46.0 7.0 58 139-197 315-372 (433)
21 3qww_A SET and MYND domain-con 92.0 0.3 1E-05 45.8 7.0 58 139-197 357-414 (433)
22 4i17_A Hypothetical protein; T 91.9 3.2 0.00011 33.0 12.4 61 14-75 7-67 (228)
23 3n71_A Histone lysine methyltr 91.4 0.36 1.2E-05 45.9 7.0 58 139-197 326-383 (490)
24 4eqf_A PEX5-related protein; a 91.4 5.9 0.0002 33.6 16.7 61 13-75 64-124 (365)
25 3ro2_A PINS homolog, G-protein 91.2 5.2 0.00018 32.4 20.0 176 16-196 7-214 (338)
26 4abn_A Tetratricopeptide repea 90.9 9.5 0.00032 35.0 16.0 163 15-193 103-286 (474)
27 3edt_B KLC 2, kinesin light ch 90.8 5.2 0.00018 31.8 16.0 57 139-196 102-158 (283)
28 3qwp_A SET and MYND domain-con 89.3 0.39 1.3E-05 44.7 5.1 58 139-197 304-361 (429)
29 1fch_A Peroxisomal targeting s 88.8 9.6 0.00033 32.0 13.7 56 17-74 101-156 (368)
30 3ulq_A Response regulator aspa 88.5 11 0.00039 32.4 17.3 56 138-196 240-295 (383)
31 4gcn_A Protein STI-1; structur 88.3 1.3 4.6E-05 32.9 6.7 49 138-195 24-72 (127)
32 2gw1_A Mitochondrial precursor 87.8 13 0.00045 32.6 13.9 59 14-75 6-64 (514)
33 3hym_B Cell division cycle pro 87.0 11 0.00038 30.7 13.2 62 12-75 20-81 (330)
34 3u4t_A TPR repeat-containing p 86.9 10 0.00036 30.3 13.7 52 140-193 197-249 (272)
35 3ieg_A DNAJ homolog subfamily 86.9 12 0.0004 30.8 17.3 61 13-75 2-62 (359)
36 2vq2_A PILW, putative fimbrial 86.0 9.9 0.00034 29.1 14.7 58 16-75 10-67 (225)
37 2y4t_A DNAJ homolog subfamily 85.0 18 0.00062 31.3 16.3 56 18-75 147-202 (450)
38 3ro2_A PINS homolog, G-protein 84.5 14 0.00049 29.7 15.0 56 138-196 239-294 (338)
39 3u4t_A TPR repeat-containing p 84.0 6.3 0.00021 31.6 9.1 57 16-74 5-61 (272)
40 2xpi_A Anaphase-promoting comp 84.0 24 0.00083 31.9 17.0 55 138-194 491-545 (597)
41 1qqe_A Vesicular transport pro 83.7 18 0.00063 30.3 13.3 153 10-193 33-186 (292)
42 3ulq_A Response regulator aspa 83.5 21 0.00071 30.7 14.5 56 139-196 160-215 (383)
43 2pl2_A Hypothetical conserved 83.5 15 0.00053 29.3 15.6 57 16-74 7-63 (217)
44 1elr_A TPR2A-domain of HOP; HO 83.3 7.9 0.00027 26.8 8.4 53 139-193 55-107 (131)
45 3qky_A Outer membrane assembly 83.0 17 0.00058 29.4 19.5 63 14-77 15-79 (261)
46 3rkv_A Putative peptidylprolyl 82.9 1.7 5.9E-05 32.9 5.0 54 139-193 28-91 (162)
47 4eqf_A PEX5-related protein; a 82.8 20 0.0007 30.1 13.4 128 20-195 183-311 (365)
48 3ieg_A DNAJ homolog subfamily 82.3 19 0.00066 29.5 18.1 57 17-75 123-179 (359)
49 1fch_A Peroxisomal targeting s 81.2 23 0.00078 29.6 16.3 59 14-74 64-122 (368)
50 4gco_A Protein STI-1; structur 80.8 4.8 0.00016 29.8 6.7 46 139-193 30-75 (126)
51 3ro3_A PINS homolog, G-protein 80.7 5.4 0.00018 28.5 6.8 55 139-196 26-80 (164)
52 2pl2_A Hypothetical conserved 80.6 20 0.00069 28.6 12.5 45 17-62 42-86 (217)
53 2ifu_A Gamma-SNAP; membrane fu 80.5 25 0.00086 29.6 14.0 38 10-47 32-69 (307)
54 2ho1_A Type 4 fimbrial biogene 80.2 20 0.00068 28.3 14.0 58 15-74 38-95 (252)
55 3sf4_A G-protein-signaling mod 80.1 26 0.00087 29.5 15.9 53 139-194 244-296 (406)
56 1hz4_A MALT regulatory protein 79.8 27 0.00093 29.6 18.8 55 139-194 110-164 (373)
57 3qky_A Outer membrane assembly 78.4 25 0.00085 28.4 18.9 50 138-193 113-176 (261)
58 4g1t_A Interferon-induced prot 78.4 4.6 0.00016 35.6 6.8 54 139-193 68-122 (472)
59 3ro3_A PINS homolog, G-protein 78.1 16 0.00054 25.9 15.1 55 138-195 105-159 (164)
60 3nf1_A KLC 1, kinesin light ch 77.6 26 0.00089 28.1 15.7 35 159-194 273-307 (311)
61 4a1s_A PINS, partner of inscut 77.5 33 0.0011 29.2 16.2 55 138-195 279-333 (411)
62 4gcn_A Protein STI-1; structur 77.4 7.2 0.00025 28.7 6.8 53 139-193 59-111 (127)
63 3hym_B Cell division cycle pro 77.3 28 0.00094 28.3 16.7 56 138-194 209-265 (330)
64 2q7f_A YRRB protein; TPR, prot 77.1 23 0.0008 27.4 15.8 29 18-46 61-89 (243)
65 2l6j_A TPR repeat-containing p 76.2 8.6 0.00029 26.2 6.5 45 139-192 21-65 (111)
66 2ond_A Cleavage stimulation fa 75.7 34 0.0012 28.6 13.9 29 18-46 103-131 (308)
67 2y4t_A DNAJ homolog subfamily 75.7 38 0.0013 29.1 15.6 60 14-75 26-85 (450)
68 2qfc_A PLCR protein; TPR, HTH, 75.6 12 0.00039 31.4 8.3 65 139-209 213-277 (293)
69 1na3_A Designed protein CTPR2; 75.2 11 0.00038 24.6 6.7 46 139-193 26-71 (91)
70 3gw4_A Uncharacterized protein 74.1 10 0.00035 28.8 7.1 55 139-195 83-137 (203)
71 2xev_A YBGF; tetratricopeptide 73.7 15 0.0005 25.8 7.4 71 139-221 56-126 (129)
72 3k9i_A BH0479 protein; putativ 73.6 11 0.00037 26.8 6.7 47 139-194 44-90 (117)
73 2q7f_A YRRB protein; TPR, prot 73.5 29 0.001 26.8 11.7 58 16-75 25-82 (243)
74 4b4t_Q 26S proteasome regulato 72.9 45 0.0015 28.7 15.9 57 138-196 191-247 (434)
75 2kck_A TPR repeat; tetratricop 72.7 13 0.00045 24.8 6.7 46 139-193 23-68 (112)
76 2gw1_A Mitochondrial precursor 71.7 50 0.0017 28.7 13.2 157 15-195 238-402 (514)
77 2dba_A Smooth muscle cell asso 71.6 9.7 0.00033 27.2 6.0 48 140-193 46-93 (148)
78 3uq3_A Heat shock protein STI1 71.5 33 0.0011 26.6 16.6 31 17-47 41-71 (258)
79 2xcb_A PCRH, regulatory protei 71.3 26 0.00087 25.7 8.6 48 139-195 69-116 (142)
80 4abn_A Tetratricopeptide repea 70.8 56 0.0019 29.7 12.4 157 22-193 76-249 (474)
81 2kc7_A BFR218_protein; tetratr 70.3 17 0.00057 24.5 6.8 47 139-193 17-63 (99)
82 2xev_A YBGF; tetratricopeptide 69.9 18 0.00063 25.2 7.2 49 139-193 19-67 (129)
83 1xi4_A Clathrin heavy chain; a 68.5 21 0.0007 39.1 9.8 148 16-192 1136-1307(1630)
84 3fp2_A TPR repeat-containing p 68.4 62 0.0021 28.5 16.9 53 141-193 214-271 (537)
85 2ifu_A Gamma-SNAP; membrane fu 68.3 53 0.0018 27.6 14.4 51 139-192 172-222 (307)
86 2ho1_A Type 4 fimbrial biogene 68.2 41 0.0014 26.3 14.0 56 17-74 74-129 (252)
87 3upv_A Heat shock protein STI1 67.0 18 0.00062 25.6 6.7 46 139-193 21-66 (126)
88 3k9i_A BH0479 protein; putativ 66.7 26 0.00089 24.7 7.5 58 16-75 29-86 (117)
89 2lni_A Stress-induced-phosphop 66.5 20 0.00067 24.8 6.7 47 139-194 67-113 (133)
90 2xpi_A Anaphase-promoting comp 66.1 75 0.0026 28.5 16.4 47 138-193 532-578 (597)
91 4gco_A Protein STI-1; structur 65.9 19 0.00063 26.5 6.7 46 139-193 64-109 (126)
92 3ma5_A Tetratricopeptide repea 65.7 30 0.001 23.9 9.7 57 16-74 9-65 (100)
93 2vgx_A Chaperone SYCD; alterna 65.6 19 0.00065 27.1 6.9 47 139-194 72-118 (148)
94 1xnf_A Lipoprotein NLPI; TPR, 65.3 48 0.0017 26.1 13.1 56 17-74 46-101 (275)
95 2h6f_A Protein farnesyltransfe 64.8 78 0.0027 28.3 16.0 55 19-74 102-156 (382)
96 4gyw_A UDP-N-acetylglucosamine 64.8 1.1E+02 0.0038 30.1 16.3 44 17-61 46-89 (723)
97 3q49_B STIP1 homology and U bo 64.7 21 0.00073 25.2 6.7 17 178-194 90-106 (137)
98 2hr2_A Hypothetical protein; a 64.5 22 0.00077 28.7 7.4 54 138-193 27-85 (159)
99 3sz7_A HSC70 cochaperone (SGT) 64.3 19 0.00066 26.9 6.6 26 167-193 82-107 (164)
100 3q15_A PSP28, response regulat 64.1 17 0.0006 31.3 7.1 54 139-195 199-252 (378)
101 1elr_A TPR2A-domain of HOP; HO 64.1 24 0.00082 24.1 6.7 49 139-196 21-69 (131)
102 2kke_A Uncharacterized protein 63.4 1 3.4E-05 29.7 -0.8 38 4-49 3-40 (53)
103 3vtx_A MAMA; tetratricopeptide 63.3 21 0.00071 26.9 6.7 46 139-193 22-67 (184)
104 3upv_A Heat shock protein STI1 63.1 24 0.00082 24.9 6.7 48 139-195 55-102 (126)
105 2kat_A Uncharacterized protein 61.8 31 0.0011 24.0 7.0 48 139-195 36-83 (115)
106 3gyz_A Chaperone protein IPGC; 61.4 19 0.00065 27.9 6.2 46 139-193 87-132 (151)
107 1elw_A TPR1-domain of HOP; HOP 61.0 25 0.00084 23.5 6.2 45 139-192 55-99 (118)
108 2vq2_A PILW, putative fimbrial 61.0 51 0.0017 24.8 14.2 56 17-73 45-100 (225)
109 2vyi_A SGTA protein; chaperone 60.6 30 0.001 23.5 6.7 47 139-194 63-109 (131)
110 3fp2_A TPR repeat-containing p 60.4 89 0.003 27.4 17.7 49 138-195 444-492 (537)
111 3ma5_A Tetratricopeptide repea 60.3 39 0.0013 23.3 9.5 71 139-224 24-94 (100)
112 2vyi_A SGTA protein; chaperone 60.2 31 0.0011 23.4 6.7 47 139-194 29-75 (131)
113 3cv0_A Peroxisome targeting si 60.1 66 0.0023 25.9 18.3 46 13-59 20-65 (327)
114 1elw_A TPR1-domain of HOP; HOP 59.6 34 0.0011 22.8 6.7 47 139-194 21-67 (118)
115 1a17_A Serine/threonine protei 58.9 30 0.001 25.0 6.7 46 139-193 64-109 (166)
116 2dba_A Smooth muscle cell asso 58.2 32 0.0011 24.2 6.7 46 139-193 82-127 (148)
117 2kat_A Uncharacterized protein 58.1 44 0.0015 23.2 10.5 58 16-75 21-78 (115)
118 1qqe_A Vesicular transport pro 57.7 28 0.00096 29.1 7.1 53 139-194 54-106 (292)
119 3gyz_A Chaperone protein IPGC; 57.0 64 0.0022 24.7 9.1 57 15-73 37-93 (151)
120 1p5q_A FKBP52, FK506-binding p 56.8 95 0.0032 26.7 15.7 32 16-47 149-180 (336)
121 4ga2_A E3 SUMO-protein ligase 56.6 32 0.0011 25.7 6.7 46 139-193 48-93 (150)
122 1ihg_A Cyclophilin 40; ppiase 56.5 9.8 0.00034 34.0 4.2 54 139-193 240-301 (370)
123 1na0_A Designed protein CTPR3; 56.2 41 0.0014 22.5 6.7 46 139-193 26-71 (125)
124 2yhc_A BAMD, UPF0169 lipoprote 56.1 73 0.0025 25.1 17.0 44 16-59 6-51 (225)
125 1na0_A Designed protein CTPR3; 55.9 41 0.0014 22.5 6.7 47 139-194 60-106 (125)
126 3u3w_A Transcriptional activat 55.1 30 0.001 28.7 6.8 53 139-195 132-185 (293)
127 1a17_A Serine/threonine protei 54.8 37 0.0013 24.4 6.6 46 139-193 30-75 (166)
128 3bee_A Putative YFRE protein; 54.7 13 0.00046 26.6 4.0 31 16-46 45-75 (93)
129 2fbn_A 70 kDa peptidylprolyl i 54.5 34 0.0012 26.3 6.7 49 139-193 55-116 (198)
130 1zu2_A Mitochondrial import re 54.1 26 0.0009 28.3 6.0 87 125-225 49-142 (158)
131 2vsy_A XCC0866; transferase, g 53.7 1.3E+02 0.0045 27.4 14.8 30 17-46 26-55 (568)
132 3rkv_A Putative peptidylprolyl 53.6 38 0.0013 25.1 6.6 33 11-43 8-40 (162)
133 2e2e_A Formate-dependent nitri 53.3 39 0.0013 25.3 6.7 46 139-193 98-143 (177)
134 3urz_A Uncharacterized protein 52.6 36 0.0012 26.8 6.7 33 14-46 4-36 (208)
135 3sz7_A HSC70 cochaperone (SGT) 52.6 68 0.0023 23.7 10.3 62 12-75 9-70 (164)
136 1p5q_A FKBP52, FK506-binding p 52.1 27 0.00093 30.2 6.3 53 139-192 164-223 (336)
137 1hh8_A P67PHOX, NCF-2, neutrop 52.1 40 0.0014 25.8 6.7 46 139-193 54-99 (213)
138 2fbn_A 70 kDa peptidylprolyl i 51.7 39 0.0013 26.0 6.6 34 13-46 37-70 (198)
139 1hxi_A PEX5, peroxisome target 51.2 26 0.0009 25.3 5.2 46 139-193 68-113 (121)
140 2hr2_A Hypothetical protein; a 49.6 29 0.00099 28.0 5.6 32 16-47 13-44 (159)
141 1xnf_A Lipoprotein NLPI; TPR, 49.4 93 0.0032 24.3 14.6 56 19-75 10-68 (275)
142 2wh5_A Acyl-COA-binding domain 49.0 36 0.0012 25.9 5.7 49 28-76 10-75 (106)
143 3as5_A MAMA; tetratricopeptide 48.8 54 0.0018 23.7 6.7 31 16-46 10-40 (186)
144 1kt0_A FKBP51, 51 kDa FK506-bi 48.1 27 0.00094 31.7 5.9 53 139-193 285-345 (457)
145 2ooe_A Cleavage stimulation fa 48.0 25 0.00086 32.0 5.6 53 138-199 62-114 (530)
146 3q15_A PSP28, response regulat 47.9 1.3E+02 0.0044 25.6 19.3 54 138-195 238-291 (378)
147 1wao_1 Serine/threonine protei 47.2 38 0.0013 31.2 6.7 15 178-192 87-101 (477)
148 2pzi_A Probable serine/threoni 46.9 1.7E+02 0.0058 28.0 11.5 45 15-60 434-478 (681)
149 2ond_A Cleavage stimulation fa 46.8 31 0.0011 28.9 5.6 41 139-187 116-156 (308)
150 2l6j_A TPR repeat-containing p 46.6 42 0.0014 22.5 5.4 34 14-47 4-37 (111)
151 2v5f_A Prolyl 4-hydroxylase su 46.6 74 0.0025 22.4 7.5 53 139-193 22-74 (104)
152 2kck_A TPR repeat; tetratricop 46.4 60 0.002 21.3 7.5 28 19-46 11-38 (112)
153 4ga2_A E3 SUMO-protein ligase 45.9 40 0.0014 25.1 5.7 29 19-47 36-64 (150)
154 3gw4_A Uncharacterized protein 45.5 92 0.0031 23.2 17.6 56 138-196 123-178 (203)
155 3lf9_A 4E10_D0_1IS1A_001_C (T1 44.9 1E+02 0.0035 24.1 7.8 47 28-74 11-60 (121)
156 2vgx_A Chaperone SYCD; alterna 44.4 65 0.0022 24.0 6.7 46 139-193 38-83 (148)
157 2c2l_A CHIP, carboxy terminus 44.2 36 0.0012 28.4 5.7 50 143-196 52-103 (281)
158 2xcb_A PCRH, regulatory protei 43.7 90 0.0031 22.6 10.2 30 17-46 21-50 (142)
159 1hxi_A PEX5, peroxisome target 43.7 72 0.0025 22.8 6.6 47 138-193 33-79 (121)
160 3q49_B STIP1 homology and U bo 42.6 83 0.0029 21.9 9.7 24 19-42 14-37 (137)
161 2kc7_A BFR218_protein; tetratr 42.5 50 0.0017 22.0 5.3 43 18-60 4-46 (99)
162 2h6f_A Protein farnesyltransfe 42.4 1.8E+02 0.0063 25.8 15.7 55 18-74 135-190 (382)
163 4i17_A Hypothetical protein; T 42.0 60 0.002 25.2 6.4 46 139-193 59-104 (228)
164 3urz_A Uncharacterized protein 41.0 1.3E+02 0.0043 23.5 12.2 28 20-47 60-87 (208)
165 2yhc_A BAMD, UPF0169 lipoprote 40.9 1.3E+02 0.0044 23.6 17.3 44 17-60 44-89 (225)
166 1hz4_A MALT regulatory protein 40.7 57 0.002 27.5 6.4 52 140-195 32-83 (373)
167 1hh8_A P67PHOX, NCF-2, neutrop 40.4 54 0.0019 25.0 5.8 53 139-192 88-148 (213)
168 3as5_A MAMA; tetratricopeptide 39.2 1E+02 0.0036 22.0 14.9 31 16-46 44-74 (186)
169 3cv0_A Peroxisome targeting si 37.7 1.5E+02 0.0053 23.6 18.9 43 16-59 57-99 (327)
170 2r5s_A Uncharacterized protein 37.6 67 0.0023 24.2 5.8 31 17-47 111-141 (176)
171 1w3b_A UDP-N-acetylglucosamine 37.1 1.9E+02 0.0063 24.3 14.1 45 140-193 221-265 (388)
172 4b4t_Q 26S proteasome regulato 36.9 1.9E+02 0.0067 24.5 19.7 55 138-195 151-205 (434)
173 1w3b_A UDP-N-acetylglucosamine 36.2 1.9E+02 0.0066 24.2 14.5 48 138-194 253-300 (388)
174 1m1e_B ICAT; cell adhesion, cy 35.9 43 0.0015 24.5 4.1 24 34-57 20-43 (81)
175 1na3_A Designed protein CTPR2; 33.9 91 0.0031 19.8 6.0 58 17-76 12-69 (91)
176 2e2e_A Formate-dependent nitri 33.1 1.2E+02 0.0043 22.3 6.7 47 139-193 61-109 (177)
177 3mkr_A Coatomer subunit epsilo 32.8 2.1E+02 0.0073 23.8 15.2 52 17-75 104-155 (291)
178 3flv_A Acyl-COA-binding domain 31.9 1.3E+02 0.0045 23.3 6.6 52 9-63 10-62 (119)
179 1zu2_A Mitochondrial import re 31.9 1E+02 0.0035 24.7 6.2 23 129-151 9-31 (158)
180 2lni_A Stress-induced-phosphop 31.6 1.2E+02 0.0041 20.5 7.3 36 11-46 13-48 (133)
181 1wao_1 Serine/threonine protei 31.3 75 0.0026 29.1 6.0 30 17-46 9-38 (477)
182 2r5s_A Uncharacterized protein 31.0 1.6E+02 0.0056 21.9 12.3 60 14-75 6-65 (176)
183 3u64_A Protein TP_0956; tetrat 29.8 60 0.0021 29.1 4.8 47 139-193 221-268 (301)
184 1hbk_A ACBP, acyl-COA binding 29.5 1.5E+02 0.0053 21.3 6.3 35 28-63 4-38 (89)
185 3uq3_A Heat shock protein STI1 28.7 1.9E+02 0.0066 22.0 17.7 57 15-74 6-62 (258)
186 2lbb_A Acyl COA binding protei 28.6 80 0.0027 23.5 4.6 35 27-63 11-45 (96)
187 2if4_A ATFKBP42; FKBP-like, al 28.4 1E+02 0.0035 26.5 6.1 49 139-193 196-258 (338)
188 2wb7_A PT26-6P; extra chromoso 27.3 1.9E+02 0.0063 28.0 7.9 53 126-180 436-489 (526)
189 3cjl_A Domain of unknown funct 26.7 21 0.0007 26.5 1.0 40 21-61 18-57 (88)
190 2wb7_A PT26-6P; extra chromoso 26.2 3.2E+02 0.011 26.3 9.4 81 47-129 403-498 (526)
191 2c2l_A CHIP, carboxy terminus 25.8 86 0.0029 26.1 5.0 32 15-46 5-36 (281)
192 4a5x_A MITD1, MIT domain-conta 25.4 1.5E+02 0.0051 21.3 5.5 27 16-42 18-44 (86)
193 2fo7_A Synthetic consensus TPR 25.1 1.5E+02 0.0052 19.6 14.3 29 18-46 5-33 (136)
194 1kt0_A FKBP51, 51 kDa FK506-bi 24.0 2.7E+02 0.0092 25.0 8.3 45 139-192 334-378 (457)
195 1ihg_A Cyclophilin 40; ppiase 23.5 2.3E+02 0.0077 24.9 7.5 46 139-193 290-335 (370)
196 1ya0_A SMG-7 transcript varian 23.4 26 0.00088 33.4 1.2 47 118-176 158-210 (497)
197 2vsy_A XCC0866; transferase, g 22.8 1.7E+02 0.0057 26.7 6.7 20 27-46 2-21 (568)
198 2v6x_A Vacuolar protein sortin 21.5 1.6E+02 0.0053 20.7 5.0 30 13-42 12-41 (85)
199 4h7y_A Dual specificity protei 21.2 1.2E+02 0.0041 24.8 4.7 51 136-192 33-87 (161)
200 2cpt_A SKD1 protein, vacuolar 20.4 2.7E+02 0.0093 21.0 6.4 32 11-42 15-46 (117)
No 1
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=2.3e-89 Score=610.38 Aligned_cols=219 Identities=59% Similarity=0.902 Sum_probs=204.2
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIR 93 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~ 93 (248)
-+.++++|||||||||||||+.+||++++++++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.++
T Consensus 4 re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~~~i~ 83 (248)
T 3uzd_A 4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVR 83 (248)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-HHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999998788888999999
Q ss_pred HHHHHhhhh----hHhhh-------------h--hHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhh
Q psy11573 94 QYRTQVRPP----CIRIL-------------A--HNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMT 154 (248)
Q Consensus 94 ~yr~kIe~E----C~eii-------------~--eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~ 154 (248)
+||++|++| |++|| + ++||||+|||||||||+|||..|++|++++++|+++|++|+++|++
T Consensus 84 ~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~iA~~ 163 (248)
T 3uzd_A 84 AYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKE 163 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999 99998 5 8999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhccCCCCC
Q psy11573 155 ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDMQGDG 232 (248)
Q Consensus 155 ~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~~e~~~~~ 232 (248)
+||||||||||||||||||||||+|+|++||.|||+|||+||++||+|++++|+|||+||||||||||+||++.++++
T Consensus 164 ~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWts~~~~~~ 241 (248)
T 3uzd_A 164 HMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241 (248)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-------
T ss_pred hCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHhhcccCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999977655
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.3e-88 Score=605.02 Aligned_cols=215 Identities=80% Similarity=1.136 Sum_probs=209.2
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMI 92 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i 92 (248)
+=+.++++|||||||||||||+++||++++++++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i 109 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 109 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred HHHHHHhhhh----hHhhh-------------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhc
Q psy11573 93 RQYRTQVRPP----CIRIL-------------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTE 155 (248)
Q Consensus 93 ~~yr~kIe~E----C~eii-------------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~ 155 (248)
++||++|++| |++|| +++||||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 110 ~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~ 189 (261)
T 3ubw_A 110 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999 99998 689999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhcc
Q psy11573 156 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSD 227 (248)
Q Consensus 156 L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~~e 227 (248)
||||||||||||||||||||||+|+|++||.|||+|||+||++||+|+|++|+|||+|||||||||++|+++
T Consensus 190 L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~eesykDstlImQLLRDNLtlWts~ 261 (261)
T 3ubw_A 190 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD 261 (261)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974
No 3
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=1.8e-88 Score=601.14 Aligned_cols=213 Identities=54% Similarity=0.833 Sum_probs=207.9
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMI 92 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i 92 (248)
+=+.++++|||||||||||||+++||++++++++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.+
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~~i 86 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEV 86 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCSHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 44678999999999999999999999999999999999999999999999999999999999999999888888888999
Q ss_pred HHHHHHhhhh----hHhhh-------------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhc
Q psy11573 93 RQYRTQVRPP----CIRIL-------------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTE 155 (248)
Q Consensus 93 ~~yr~kIe~E----C~eii-------------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~ 155 (248)
++||++|++| |++|| ++++|||+|||||||||+|||..|++|++++++|+++|++|+++|+++
T Consensus 87 ~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 166 (236)
T 3iqu_A 87 REYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKE 166 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999 99998 689999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhh
Q psy11573 156 LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWT 225 (248)
Q Consensus 156 L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~ 225 (248)
||||||||||||||||||||||+|+|++||.+||+|||+||++||+|+|++|+|||+||||||||||+||
T Consensus 167 L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~eld~l~eesykDstlImqLLRDNLtlWt 236 (236)
T 3iqu_A 167 MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWT 236 (236)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhhhHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 4
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=9.4e-87 Score=597.65 Aligned_cols=222 Identities=70% Similarity=1.016 Sum_probs=203.4
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcC--CCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLD--VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEM 91 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~--~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~ 91 (248)
=+.++++||||+|||||+||+.+||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.
T Consensus 8 re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~~~~ 87 (260)
T 1o9d_A 8 REENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVNS 87 (260)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHHHHH
Confidence 4678899999999999999999999999999 99999999999999999999999999999999999988888889999
Q ss_pred HHHHHHHhhhh----hHhhh-------------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhh
Q psy11573 92 IRQYRTQVRPP----CIRIL-------------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMT 154 (248)
Q Consensus 92 i~~yr~kIe~E----C~eii-------------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~ 154 (248)
|++||++|++| |++|| ++++|||+|||||||||+|||..|++|++++++|+++|++|+++|+.
T Consensus 88 i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~ 167 (260)
T 1o9d_A 88 IREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIATT 167 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999 99998 68999999999999999999999999999999999999999999998
Q ss_pred cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhccCCCCCCC
Q psy11573 155 ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDMQGDGKD 234 (248)
Q Consensus 155 ~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~~e~~~~~~~ 234 (248)
+|||||||||||+||||||||||+|+|++||.|||+|||+|+++||+|+|++|+|+|+|||||||||++|+++.++++..
T Consensus 168 ~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~EesykDstlImqLLRDNLtlWts~~~~~~~~ 247 (260)
T 1o9d_A 168 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 247 (260)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTC-----CHHHHHHHHHHHHHHHTC--------
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHHhhhccCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987665554
Q ss_pred c
Q psy11573 235 E 235 (248)
Q Consensus 235 ~ 235 (248)
+
T Consensus 248 ~ 248 (260)
T 1o9d_A 248 E 248 (260)
T ss_dssp -
T ss_pred c
Confidence 3
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=5.3e-86 Score=585.50 Aligned_cols=213 Identities=79% Similarity=1.132 Sum_probs=207.4
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIR 93 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~ 93 (248)
-+.++++||||+|||||+||+.+||++++.+++||.||||||||||||+||++|+|||+|++++|+++.+|++.+++.++
T Consensus 5 re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i~ 84 (234)
T 2br9_A 5 REDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIR 84 (234)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred HHHHHhhhh----hHhhh-------------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcC
Q psy11573 94 QYRTQVRPP----CIRIL-------------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTEL 156 (248)
Q Consensus 94 ~yr~kIe~E----C~eii-------------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L 156 (248)
+||++|++| |++|| ++++|||+|||||||||+|||..|++|++++++|+++|++|+++|+.+|
T Consensus 85 ~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~L 164 (234)
T 2br9_A 85 EYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 164 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999999999 99998 6999999999999999999999999999999999999999999999899
Q ss_pred CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhc
Q psy11573 157 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTS 226 (248)
Q Consensus 157 ~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~~ 226 (248)
|||||+||||+||||||||||+|+|++||.|||+|||+|++++|+|+|++|+|+|+|||||||||++|++
T Consensus 165 ~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~eld~l~eesykDstlImqLLrDNLtlWts 234 (234)
T 2br9_A 165 PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 234 (234)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTTHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhccChhhhHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=2e-85 Score=588.76 Aligned_cols=214 Identities=57% Similarity=0.861 Sum_probs=207.1
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcC---CCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLD---VELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKL 89 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~---~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~ 89 (248)
+-+.++++||||||||||+||+++||++++.+ ++||.||||||||||||+||++|+|||+|++++|+++.+|++.++
T Consensus 27 ~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~~ 106 (260)
T 2npm_A 27 ARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDAS 106 (260)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHHH
Confidence 46788999999999999999999999999998 999999999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHhhhh----hHhhh-------------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHH
Q psy11573 90 EMIRQYRTQVRPP----CIRIL-------------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIA 152 (248)
Q Consensus 90 ~~i~~yr~kIe~E----C~eii-------------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a 152 (248)
+.|++||++|++| |++|| ++++|||+|||||||||+|||..|++|++++++|+++|++|+++|
T Consensus 107 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA 186 (260)
T 2npm_A 107 KMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVA 186 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 99998 689999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHHhhHhhhhcc
Q psy11573 153 MTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSD 227 (248)
Q Consensus 153 ~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~~e 227 (248)
.+||||||||||||||||||||||+|+|++||.|||+|||+|+++||+|+|++|+|+|+|||||||||++|+++
T Consensus 187 -~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~eld~L~eesykDstlImqLLRDNLtlWts~ 260 (260)
T 2npm_A 187 -KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQLDKLSEDCYKDSTLIMQLLRDNLTLWTAD 260 (260)
T ss_dssp -TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTGGGCCTTTHHHHHHHHHHHHHHHHHHTC-
T ss_pred -HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999974
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=2.3e-82 Score=569.39 Aligned_cols=210 Identities=21% Similarity=0.364 Sum_probs=179.2
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhh-hhhch-hHHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKE-ENKGA-EDKLE 90 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke-~~~~~-~~~~~ 90 (248)
+-+.++++|||||||||||||+++| ++++++||.||||||||||||+||++|+|||+|++++|++ +.+|+ +.+++
T Consensus 28 ~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~~ 104 (268)
T 3efz_A 28 KLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQ 104 (268)
T ss_dssp ------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHHH
Confidence 4568899999999999999999999 8889999999999999999999999999999999999999 67787 88899
Q ss_pred HHHHHHHHhhhh----hHhhh-------------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHh
Q psy11573 91 MIRQYRTQVRPP----CIRIL-------------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAM 153 (248)
Q Consensus 91 ~i~~yr~kIe~E----C~eii-------------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~ 153 (248)
.+++||++|++| |++|| + ++|||+|||||||||+|||..|++|++++++|+++|++|+++|+
T Consensus 105 ~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~ 183 (268)
T 3efz_A 105 VIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRER 183 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 99998 5 99999999999999999999999999999999999999999999
Q ss_pred hcC--CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH---HHHhhccCCcccHHhHHHHHHHHHhhHhhhhccC
Q psy11573 154 TEL--PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD---AIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDM 228 (248)
Q Consensus 154 ~~L--~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~---ai~~ld~l~ee~y~ds~~ilqLLrDNL~lW~~e~ 228 (248)
++| |||||||||||||||||||||+|+|++||.+||+|||+ ||++||+|+|++ |+|||||||||++||++.
T Consensus 184 ~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde~~~AIaeld~L~ees----tlImQLLRDNLtlWtsd~ 259 (268)
T 3efz_A 184 SFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQAAENSRSDSEQFSENT----EKLLKILRDNVSQWEQGC 259 (268)
T ss_dssp HHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTCCC--CCCHHH----HHHHHHHHHHHHHHTTTC
T ss_pred HhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHhccCChHH----HHHHHHHHHHHHHhhccc
Confidence 899 99999999999999999999999999999999999999 999999999987 999999999999999986
Q ss_pred CC
Q psy11573 229 QG 230 (248)
Q Consensus 229 ~~ 230 (248)
++
T Consensus 260 ~~ 261 (268)
T 3efz_A 260 SG 261 (268)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=7.8e-75 Score=510.55 Aligned_cols=201 Identities=17% Similarity=0.187 Sum_probs=182.3
Q ss_pred chhH---HHhhHHHHhcCHHHHHHHHHHHhh----cCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhH
Q psy11573 15 QPVQ---QLSHFRFLFRLFSEMVEAMKKVAS----LDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAED 87 (248)
Q Consensus 15 ~~~~---~~a~laeqaeRydDmv~~mK~li~----~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~ 87 (248)
+.++ ++|||||||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|++++|++ +|++.
T Consensus 4 e~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~~~ 81 (227)
T 2o8p_A 4 DERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNNDE 81 (227)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSCHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCCHH
Confidence 4567 999999999999999999999999 89999999999999999999999999999999999998 67788
Q ss_pred HHHHHHHHHHHhhhh----hHhhh----------hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHh
Q psy11573 88 KLEMIRQYRTQVRPP----CIRIL----------AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAM 153 (248)
Q Consensus 88 ~~~~i~~yr~kIe~E----C~eii----------~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~ 153 (248)
+++.+++||++|++| |++|| .++||||+|||||||||+|||..|+ +++|+++|++|+++|+
T Consensus 82 ~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A~~iA~ 156 (227)
T 2o8p_A 82 LVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDAFTLLC 156 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHHHHHHH
Confidence 899999999999999 99998 4899999999999999999999998 8899999999999999
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccC-CcccHHhHHHHHHHHHhhHh
Q psy11573 154 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTL-SEDSYKDSTLIMQLLRDNLT 222 (248)
Q Consensus 154 ~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l-~ee~y~ds~~ilqLLrDNL~ 222 (248)
++|||||||||||+||||||||||+|+|++||.+|++||+.+--.+..- +.+.+++.|+|+|+|||||.
T Consensus 157 ~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~~~q~~~d~~~ 226 (227)
T 2o8p_A 157 EHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITVYLQGIKDYIE 226 (227)
T ss_dssp HCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC----
T ss_pred hhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999999999999999763222221 22448889999999999984
No 9
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.89 E-value=0.42 Score=36.84 Aligned_cols=153 Identities=17% Similarity=0.103 Sum_probs=79.7
Q ss_pred HHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHHHHHH
Q psy11573 18 QQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIRQYRT 97 (248)
Q Consensus 18 ~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~ 97 (248)
..++....+-|+|++++.+++++++.+|.- .+=...+..+|-. .+....+...+.......... .........-+..
T Consensus 9 ~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 85 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLKKFVVLDTTS-AEAYYILGSANFM 85 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHH
Confidence 456777888899999999999999998873 4555556666644 344444444443322221100 0000011111111
Q ss_pred Hhhhh-----hHhhh---hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhh
Q psy11573 98 QVRPP-----CIRIL---AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALN 169 (248)
Q Consensus 98 kIe~E-----C~eii---~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN 169 (248)
.-..+ +...+ +.. ...+...|..|.-+ | --+.|...|++++++ .|.+| ....|
T Consensus 86 ~~~~~~a~~~~~~a~~~~~~~-~~~~~~lg~~~~~~-----g-----~~~~A~~~~~~~l~~-----~p~~~---~~~~~ 146 (184)
T 3vtx_A 86 IDEKQAAIDALQRAIALNTVY-ADAYYKLGLVYDSM-----G-----EHDKAIEAYEKTISI-----KPGFI---RAYQS 146 (184)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHH-----CTTCH---HHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHHh-----C-----CchhHHHHHHHHHHh-----cchhh---hHHHH
Confidence 00000 22222 111 11122233333211 1 135788999998865 34444 34455
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 170 FSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 170 ~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.+..|+. +|+.++|+..-++|++
T Consensus 147 lg~~~~~-~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 147 IGLAYEG-KGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5555554 8999999988777664
No 10
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=95.75 E-value=0.78 Score=38.78 Aligned_cols=150 Identities=9% Similarity=0.005 Sum_probs=86.5
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIRQY 95 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~y 95 (248)
.+...+......+.|+++..+++++.+. .+.+++.+..+ ..|+.+ + .+... ++ .....+..|
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~-~~~~~~~~~~~-~~~~~l-~----------~~~~~---~~--~~~~Ai~~~ 138 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKK-EEYHPEFQQFL-QWQYYV-A----------AYVLK---KV--DYEYCILEL 138 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT-CCCCHHHHHHH-HHHHHH-H----------HHHTT---SS--CHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhcc-ccCChHHHHHH-HHHHHH-H----------HHHHc---cc--CHHHHHHHH
Confidence 3444455566679999999999998874 34455554322 122211 1 11100 01 122333444
Q ss_pred HHHhhhh--hHhhhhhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHH
Q psy11573 96 RTQVRPP--CIRILAHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVF 173 (248)
Q Consensus 96 r~kIe~E--C~eii~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF 173 (248)
.+-+.-. ..+.. ..+-.+...|..|..+-. -++|...|++|++++.. ++..+|....+..|.+..
T Consensus 139 ~~al~~~~~~~~~~--~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~nlg~~ 205 (293)
T 3u3w_A 139 KKLLNQQLTGIDVY--QNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKA 205 (293)
T ss_dssp HHHHHTCCCCSCTT--HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccHH--HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHH
Confidence 4443311 11111 011112223444332211 35799999999998864 666677777788899988
Q ss_pred HHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 174 YYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 174 ~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
|++ +|+.++|+...++|++-+..
T Consensus 206 y~~-~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 206 LYL-DSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHH-HhHHHHHHHHHHHHHHHHHH
Confidence 887 79999999999999886643
No 11
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=95.63 E-value=0.91 Score=38.73 Aligned_cols=185 Identities=11% Similarity=-0.038 Sum_probs=89.2
Q ss_pred hhhhhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCH---HHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhc
Q psy11573 8 GGYLADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTV---EERNLLSVAYKNVIGARRASWRIISSIEQKEENKG 84 (248)
Q Consensus 8 ~~~~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~---EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~ 84 (248)
|..-.....+..++......|+|++++.++.++++..|.-.. .=...+..+|-. .+....|...+.....-....+
T Consensus 3 ~~~~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~ 81 (406)
T 3sf4_A 3 GSMEASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIG 81 (406)
T ss_dssp --CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhcc
Confidence 333344445667888888899999999999999998665221 122344444432 3344444444432111100000
Q ss_pred hhHH-H----HHHHHHHH--Hhhhh---hHhhh--------hhHHHHHHHhhcccccchhh-------ccC---chhHHH
Q psy11573 85 AEDK-L----EMIRQYRT--QVRPP---CIRIL--------AHNVYFRNTLKGDYHRYLAE-------FAT---GTERKE 136 (248)
Q Consensus 85 ~~~~-~----~~i~~yr~--kIe~E---C~eii--------~eskvFy~KmKGDyyRYlAE-------~~~---~~~~~~ 136 (248)
.... . .+..-|.. ...+= +...+ +...+..+...|..|...-. -.. .++-..
T Consensus 82 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~ 161 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRD 161 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHH
Confidence 0000 0 00011100 00000 12222 11111122223333322222 111 123344
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 137 AAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 137 ~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
..+.|...|++|+.++.. . +.+|.......|.+..++. +|+.++|+...++++.-+-
T Consensus 162 ~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 218 (406)
T 3sf4_A 162 ALQAAVDFYEENLSLVTA-L-GDRAAQGRAFGNLGNTHYL-LGNFRDAVIAHEQRLLIAK 218 (406)
T ss_dssp HHHHHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHHHHHHH-HTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Confidence 567889999999988865 3 2334444444555555444 7999999998888876543
No 12
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.62 E-value=0.75 Score=37.66 Aligned_cols=59 Identities=24% Similarity=0.197 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
.+.|...|++|+.++....++.+|.......+.+..++. +|+.++|+...++++..+-.
T Consensus 169 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 169 YEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 367999999999999887888888888888888777766 79999999999999876543
No 13
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.82 E-value=0.36 Score=38.80 Aligned_cols=59 Identities=25% Similarity=0.223 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
.+.|...|++|+.+++...++.+|.......|.+..++. +|+.++|+...++++..+-.
T Consensus 143 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Confidence 357999999999998888888899888888888877776 79999999999999876543
No 14
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=94.46 E-value=1.4 Score=39.09 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
.++|...|++|+++ .|.++..-.+.+++..|++..+++.++|+..-++|+
T Consensus 350 ~~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal 399 (472)
T 4g1t_A 350 YEEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGV 399 (472)
T ss_dssp HHHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35789999999853 344445555677888888777899999987666554
No 15
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=94.01 E-value=1.5 Score=36.98 Aligned_cols=149 Identities=8% Similarity=-0.002 Sum_probs=81.8
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHHH
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIRQ 94 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~ 94 (248)
+.+..++......++|++++.++++.++..+. ..+....+.. +.. ++ .+-.. .| ...+.+..
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~-~~~~~~~~~~-~~~-~~----------~~~~~---~~--~~~~A~~~ 137 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-HPEFQQFLQW-QYY-VA----------AYVLK---KV--DYEYCILE 137 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC-CHHHHHHHHH-HHH-HH----------HHHHT---SS--CHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccC-ChhHHHHHHH-HHH-HH----------HHHhc---CC--CHHHHHHH
Confidence 34455666666789999999999998887665 3333322221 111 11 11000 01 12233344
Q ss_pred HHHHhhhh--hHhhhhhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHH
Q psy11573 95 YRTQVRPP--CIRILAHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSV 172 (248)
Q Consensus 95 yr~kIe~E--C~eii~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SV 172 (248)
|.+-+..- ..+ +...+..+...|..|...-+ -+.|...|++|+++++. .+........+..|.+.
T Consensus 138 ~~~al~~~~~~~~--~~~~~~~~~~lg~~y~~~~~----------~~~A~~~~~kal~~~~~-~~~~~~~~~~~~~nlg~ 204 (293)
T 2qfc_A 138 LKKLLNQQLTGID--VYQNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAK 204 (293)
T ss_dssp HHHHHTTCCCSSC--TTHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCc--hHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHh-cCccccchHHHHHhHHH
Confidence 44333211 111 11122233344554433211 35789999999999864 43222222356677777
Q ss_pred HHHHHhCChHHHHHHHHHHHHHH
Q psy11573 173 FYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 173 F~yEil~~~~~A~~iAk~afd~a 195 (248)
.|+. +|+.++|+...++|++-+
T Consensus 205 ~y~~-~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 205 ALYL-DSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHH-HhhHHHHHHHHHHHHHHH
Confidence 7666 899999999999998765
No 16
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=93.24 E-value=2.7 Score=41.73 Aligned_cols=170 Identities=14% Similarity=0.129 Sum_probs=85.5
Q ss_pred chhhhhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH-Hhhhhhhhch
Q psy11573 7 LGGYLADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS-IEQKEENKGA 85 (248)
Q Consensus 7 ~~~~~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~-ieqke~~~~~ 85 (248)
||..=...+-+..++.+..+.|+|++++.+++++++.+|+. .+=.+-|..+|.. .+..-.|...+.. ++-+... .
T Consensus 2 pgs~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~~--~ 77 (723)
T 4gyw_A 2 PGSCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPTF--A 77 (723)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTC--H
T ss_pred CCCCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCC--H
Confidence 34444445566778888999999999999999999998875 3444555555554 2333334333321 1111110 0
Q ss_pred hHHHHHHHHHHHH--hhhh---hHhhh---hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCC
Q psy11573 86 EDKLEMIRQYRTQ--VRPP---CIRIL---AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELP 157 (248)
Q Consensus 86 ~~~~~~i~~yr~k--Ie~E---C~eii---~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~ 157 (248)
.....+-.-|... .++- +...| +..--. +...|..|+-+ | -.+.|..+|++|+++ .
T Consensus 78 ~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a-~~~Lg~~~~~~-----g-----~~~eAi~~~~~Al~l-----~ 141 (723)
T 4gyw_A 78 DAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADA-HSNLASIHKDS-----G-----NIPEAIASYRTALKL-----K 141 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH-HHHHHHHHHHT-----T-----CHHHHHHHHHHHHHH-----C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH-HHHHHHHHHHc-----C-----CHHHHHHHHHHHHHh-----C
Confidence 0011111111100 0000 11222 111111 11112222111 1 145789999999865 3
Q ss_pred CCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhc
Q psy11573 158 PTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELD 200 (248)
Q Consensus 158 pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld 200 (248)
|.+| ....|.+. .|..+++.++|++..+++.+-.-..++
T Consensus 142 P~~~---~a~~~L~~-~l~~~g~~~~A~~~~~kal~l~~~~~~ 180 (723)
T 4gyw_A 142 PDFP---DAYCNLAH-CLQIVCDWTDYDERMKKLVSIVADQLE 180 (723)
T ss_dssp SCCH---HHHHHHHH-HHHHTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCh---HHHhhhhh-HHHhcccHHHHHHHHHHHHHhChhHHh
Confidence 5554 33344443 445589999999988888876655443
No 17
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.17 E-value=3.8 Score=35.31 Aligned_cols=180 Identities=12% Similarity=0.002 Sum_probs=89.5
Q ss_pred hhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHH----HHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhH
Q psy11573 12 ADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVE----ERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAED 87 (248)
Q Consensus 12 ~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~E----ERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~ 87 (248)
.....+..++......|+|++++.+++++++..+. +.+ =...+..+|-. .+....+...+....+.....+...
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCch
Confidence 44455667788888899999999999999998665 222 22334444432 3444455554432211110000000
Q ss_pred -HH----HHHHHHHHHhh-hh----hHhhh--------hhHHHHHHHhhcccccchhhc------c-CchhHHHHHHHHH
Q psy11573 88 -KL----EMIRQYRTQVR-PP----CIRIL--------AHNVYFRNTLKGDYHRYLAEF------A-TGTERKEAAENSL 142 (248)
Q Consensus 88 -~~----~~i~~yr~kIe-~E----C~eii--------~eskvFy~KmKGDyyRYlAE~------~-~~~~~~~~~e~A~ 142 (248)
.. .+..-|...=. ++ +...+ ....+..+...|..|...-.. . ...+-....+.|.
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~ 203 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAV 203 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHH
Confidence 00 00001100000 00 11111 111222233334333333220 0 0112233467899
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 143 VAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 143 ~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
..|++|++++... +.+|.......+.+..++ .+|+.++|+...++++.-.-
T Consensus 204 ~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~ 254 (411)
T 4a1s_A 204 EFYQENLKLMRDL--GDRGAQGRACGNLGNTYY-LLGDFQAAIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHH
Confidence 9999999988653 223444444445554444 48999999999888877554
No 18
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.15 E-value=0.42 Score=45.48 Aligned_cols=58 Identities=7% Similarity=-0.070 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+.|...|++|+++-...|+|.||--+....|.++.|+. .|+.++|..+.++|+.--..
T Consensus 368 ~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 368 EEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWH-AGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999988887 79999999999998865443
No 19
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.89 E-value=0.2 Score=46.78 Aligned_cols=58 Identities=17% Similarity=0.130 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+.|...|++|+.+-+..++|.||.......|.++.|.. .|+.++|..+.++|++--..
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999988877 79999999999888775443
No 20
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.16 E-value=0.28 Score=45.98 Aligned_cols=58 Identities=5% Similarity=-0.030 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+.|...|++|+++.++.|.|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 372 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSK 372 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999988888877776 89999999999999775543
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.96 E-value=0.3 Score=45.77 Aligned_cols=58 Identities=14% Similarity=0.031 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+.|...|++|+++-++.++|.||--.....|.+.-|+. .|+.++|..+-++|++=-..
T Consensus 357 ~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~-qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 357 EGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMG-LENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999888777 79999999999888775544
No 22
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.93 E-value=3.2 Score=32.99 Aligned_cols=61 Identities=8% Similarity=-0.021 Sum_probs=43.8
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
-+.+..++......|+|++++.++.++++.+|+-+..-...+..+|-. .+....|...+..
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 67 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFDI 67 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHHH
Confidence 356778888889999999999999999998874455545556666544 4555566665543
No 23
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=91.45 E-value=0.36 Score=45.93 Aligned_cols=58 Identities=14% Similarity=0.053 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+.|...|++|+++.++.|.|.||..+...-|.+..|.. +|+.++|..+.++|++--..
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999999888777 79999999999998875443
No 24
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=91.44 E-value=5.9 Score=33.59 Aligned_cols=61 Identities=11% Similarity=-0.010 Sum_probs=43.7
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
+.+.+..++......|+|++++.+++++++.+|.- .+=...+..+|-. .+....|...+..
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~ 124 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQR 124 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 44557788888999999999999999999987763 5555666666654 3455556555543
No 25
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=91.20 E-value=5.2 Score=32.44 Aligned_cols=176 Identities=9% Similarity=-0.068 Sum_probs=87.8
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHH----HHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHH-H-
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEE----RNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDK-L- 89 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EE----RnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~-~- 89 (248)
.+..++......|+|++++.+++++++..|. +++. ...+..+|-. .+....+...+..........+.... .
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 84 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAK 84 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccHHHHH
Confidence 4567788888999999999999999988665 3221 2233444332 23344444444322111100011100 0
Q ss_pred ---HHHHHHHHHhh-hh----hHhhh--------hhHHHHHHHhhcccccchhhcc----------CchhHHHHHHHHHH
Q psy11573 90 ---EMIRQYRTQVR-PP----CIRIL--------AHNVYFRNTLKGDYHRYLAEFA----------TGTERKEAAENSLV 143 (248)
Q Consensus 90 ---~~i~~yr~kIe-~E----C~eii--------~eskvFy~KmKGDyyRYlAE~~----------~~~~~~~~~e~A~~ 143 (248)
.+..-|...=. ++ +...+ +...+..+...|..|...-... ...+-....+.|..
T Consensus 85 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~ 164 (338)
T 3ro2_A 85 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVD 164 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHH
Confidence 01111110000 00 11111 1122233344455554443310 01122334678888
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 144 AYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 144 aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
.|++|+.++... + .+|.......+.+.. |...|+.++|+...++++.-+-
T Consensus 165 ~~~~a~~~~~~~-~-~~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 165 LYEENLSLVTAL-G-DRAAQGRAFGNLGNT-HYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHH-T-CHHHHHHHHHHHHHH-HHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-C-CHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHH
Confidence 999998887642 2 233333344444444 4447999999999888876553
No 26
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.90 E-value=9.5 Score=34.95 Aligned_cols=163 Identities=20% Similarity=0.134 Sum_probs=83.2
Q ss_pred chhHHHhhHHHHhcCH-HHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhc---------
Q psy11573 15 QPVQQLSHFRFLFRLF-SEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKG--------- 84 (248)
Q Consensus 15 ~~~~~~a~laeqaeRy-dDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~--------- 84 (248)
+.+..++......++| ++++.+++++++.+|.. .+=...|..+|-.. +....|...+....+......
T Consensus 103 ~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~lg~~~ 180 (474)
T 4abn_A 103 QALMLKGKALNVTPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKK-GDVTSAHTCFSGALTHCKNKVSLQNLSMVL 180 (474)
T ss_dssp HHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCHHHHHHHHHHH
Confidence 3455667777777888 88888888887776653 44555555555432 444444444432211110000
Q ss_pred --h---------hHHHHHHHHHHHHhhhhhHhhhhhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHh
Q psy11573 85 --A---------EDKLEMIRQYRTQVRPPCIRILAHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAM 153 (248)
Q Consensus 85 --~---------~~~~~~i~~yr~kIe~EC~eii~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~ 153 (248)
. ......+..|++-++.. +.. ...+-..|..|..+. |..+. ...-.+.|..+|++|+.+
T Consensus 181 ~~~~~~~~~~~~g~~~~A~~~~~~al~~~-----p~~-~~~~~~lg~~~~~~~-~~~~~-~~g~~~~A~~~~~~al~~-- 250 (474)
T 4abn_A 181 RQLQTDSGDEHSRHVMDSVRQAKLAVQMD-----VLD-GRSWYILGNAYLSLY-FNTGQ-NPKISQQALSAYAQAEKV-- 250 (474)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHHHC-----TTC-HHHHHHHHHHHHHHH-HHTTC-CHHHHHHHHHHHHHHHHH--
T ss_pred HHhccCChhhhhhhHHHHHHHHHHHHHhC-----CCC-HHHHHHHHHHHHHHH-Hhhcc-ccchHHHHHHHHHHHHHh--
Confidence 0 01112222222222221 111 111222233332220 11111 112357899999999876
Q ss_pred hcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 154 TELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 154 ~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.|.+|-......|.+..|+. +|+.++|+...++|+.
T Consensus 251 ---~p~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 251 ---DRKASSNPDLHLNRATLHKY-EESYGEALEGFSQAAA 286 (474)
T ss_dssp ---CGGGGGCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred ---CCCcccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 23222555667777777766 7999999988777764
No 27
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=90.80 E-value=5.2 Score=31.77 Aligned_cols=57 Identities=14% Similarity=0.055 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
+.|...|++|+.+.+...+|.||.......|.+..++. +|+.++|+...+++++...
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHH
Confidence 57899999999999888888899888888888887776 7999999999999988643
No 28
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.33 E-value=0.39 Score=44.75 Aligned_cols=58 Identities=12% Similarity=0.010 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+.|...|++++++.++.|+|.||..+...-|.+.-|.. +|+.++|..+.++++.--..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~ 361 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRI 361 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHH
Confidence 46788888888887788999999999999998877766 79999999999998765443
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=88.82 E-value=9.6 Score=31.95 Aligned_cols=56 Identities=16% Similarity=0.137 Sum_probs=33.7
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
+..++.+....|+|++++.+++++++.+|. +.+=...+..+|-. .+....|...+.
T Consensus 101 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 156 (368)
T 1fch_A 101 WQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEILR 156 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 445666677778888888888888777665 34444555555543 334444444443
No 30
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=88.48 E-value=11 Score=32.42 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
.+.|...|++|++++...-. .|.......|.+..++. +|+.++|+...++|+.-+-
T Consensus 240 ~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 240 YEDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIHYK-LGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 35799999999999875332 14344445555655555 8999999999988877653
No 31
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=88.28 E-value=1.3 Score=32.86 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
-+.|...|++|+++ .|.+| ....|.+..|+. +|+.++|+...++|+.-.
T Consensus 24 ~~~A~~~y~~Al~~-----~p~~~---~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~ 72 (127)
T 4gcn_A 24 FEKAHVHYDKAIEL-----DPSNI---TFYNNKAAVYFE-EKKFAECVQFCEKAVEVG 72 (127)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHhHHHHHHH-hhhHHHHHHHHHHHHHhC
Confidence 35799999999875 45554 345677777777 799999999988887643
No 32
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=87.83 E-value=13 Score=32.60 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=43.0
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+-+..++....+.|+|++++.++.+++..+| +..-...+..+|-. .+....|...+..
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~~~~~~la~~~~~-~g~~~~A~~~~~~ 64 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELKE--DPVFYSNLSACYVS-VGDLKKVVEMSTK 64 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc--cHHHHHhHHHHHHH-HhhHHHHHHHHHH
Confidence 34567788888899999999999999999887 46666666666644 4555666666544
No 33
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=87.00 E-value=11 Score=30.70 Aligned_cols=62 Identities=10% Similarity=-0.036 Sum_probs=39.9
Q ss_pred hhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 12 ADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 12 ~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+...+..++......|+|++++..+.+++..+|.-.. -...+..++ ...+....+...+..
T Consensus 20 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~-~~~~~~~~~-~~~~~~~~A~~~~~~ 81 (330)
T 3hym_B 20 ENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHAS-CLPVHIGTL-VELNKANELFYLSHK 81 (330)
T ss_dssp CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT-THHHHHHHH-HHHTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCChh-hHHHHHHHH-HHhhhHHHHHHHHHH
Confidence 34556778888888899999999999999887665432 222233333 233455555555543
No 34
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=86.94 E-value=10 Score=30.26 Aligned_cols=52 Identities=12% Similarity=0.017 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchH-HHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 140 NSLVAYKSASDIAMTELPPTHPIRL-GLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 140 ~A~~aY~~A~~~a~~~L~pt~pirL-gLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.|...|++|+++....-.+. +-.+ ....+.+.+ |..+|+.++|+...++++.
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~~~~A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYY-YTINRDKVKADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 47889999999886433222 2233 333444444 4558999999988777764
No 35
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=86.92 E-value=12 Score=30.83 Aligned_cols=61 Identities=8% Similarity=0.103 Sum_probs=39.7
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
+++.+..++......|+|++++.+++++++.+|. +.+=...+..+|-. .+....|...+..
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~-~~~~~~A~~~~~~ 62 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLA-MGKSKAALPDLTK 62 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHH-ccCHHHHHHHHHH
Confidence 4556677777888888888888888888887665 34444555555543 3445555555543
No 36
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=85.99 E-value=9.9 Score=29.06 Aligned_cols=58 Identities=7% Similarity=-0.035 Sum_probs=39.0
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+..++......|+|++++.+++++++..|.. .+-...+..+|-. .+....|...+..
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 67 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHHH
Confidence 34567778888999999999999999887654 4444455555543 3444555555543
No 37
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=85.01 E-value=18 Score=31.25 Aligned_cols=56 Identities=14% Similarity=0.132 Sum_probs=36.9
Q ss_pred HHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 18 QQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 18 ~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
..++......|+|++++.++.++++..|. +..-...+..+|-. .+....|...+..
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 202 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKA 202 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 34466677889999999999999887665 44445555555543 3445555555543
No 38
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=84.52 E-value=14 Score=29.69 Aligned_cols=56 Identities=16% Similarity=0.004 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
.+.|...|++|+.++.. .+ +|.....+++.-...|..+|+.++|+...++++.-+-
T Consensus 239 ~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 239 FETASEYYKKTLLLARQ-LK--DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hc--chhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 35788999999988864 22 3444444444444445558999999999888877654
No 39
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=84.03 E-value=6.3 Score=31.61 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=33.1
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
.+..++......|+|++++.+++++++.+|.-. +-...+..+|-. .+..-.|...+.
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~~l~~~~~~-~~~~~~A~~~~~ 61 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSP-YIYNRRAVCYYE-LAKYDLAQKDIE 61 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCS-TTHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHH-HhhHHHHHHHHH
Confidence 455677777777888888888888877765532 233344444432 333444444443
No 40
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=84.03 E-value=24 Score=31.87 Aligned_cols=55 Identities=9% Similarity=-0.015 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
.+.|...|++++++... . |.+|-....+++.-...|-..|+.++|+...++++..
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 46789999999987643 2 3456543334444344455589999999988887754
No 41
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=83.74 E-value=18 Score=30.27 Aligned_cols=153 Identities=7% Similarity=-0.051 Sum_probs=79.0
Q ss_pred hhhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHH
Q psy11573 10 YLADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKL 89 (248)
Q Consensus 10 ~~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~ 89 (248)
+-.+++.+.+.+.+....|+|++++.++.+.++..+.+.. ..-...+|.|+-...+ + .| ...
T Consensus 33 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~--~~~~a~~~~~lg~~~~-----------~---~g--~~~ 94 (292)
T 1qqe_A 33 FEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGN--EDEAGNTYVEAYKCFK-----------S---GG--NSV 94 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHH-----------H---TT--CHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHH-----------H---CC--CHH
Confidence 6667777888888888899999999999998876433321 1122333333221110 0 01 111
Q ss_pred HHHHHHHHHhhhhhHhhhhhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchH-HHhh
Q psy11573 90 EMIRQYRTQVRPPCIRILAHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRL-GLAL 168 (248)
Q Consensus 90 ~~i~~yr~kIe~EC~eii~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirL-gLaL 168 (248)
..+..|.+-++--...--....+..+...|..|.-. .|+ .+.|...|++|+++.... . +|... ....
T Consensus 95 ~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~----lg~-----~~~A~~~~~~Al~~~~~~-~--~~~~~~~~~~ 162 (292)
T 1qqe_A 95 NAVDSLENAIQIFTHRGQFRRGANFKFELGEILEND----LHD-----YAKAIDCYELAGEWYAQD-Q--SVALSNKCFI 162 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCC-----HHHHHHHHHHHHHHHHHT-T--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh----hcC-----HHHHHHHHHHHHHHHHhC-C--ChHHHHHHHH
Confidence 223333333321100000001111222223322210 011 357999999999987531 1 23232 2445
Q ss_pred hHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 169 NFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 169 N~SVF~yEil~~~~~A~~iAk~afd 193 (248)
|.+.++.. +|++++|+...+++..
T Consensus 163 ~lg~~~~~-~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 163 KCADLKAL-DGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 66666666 7999999987666554
No 42
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=83.55 E-value=21 Score=30.73 Aligned_cols=56 Identities=18% Similarity=0.005 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
+.|...|++|+++... .+. .+.+.+.+++.--..|.-+|+.++|+...++|++-+-
T Consensus 160 ~~A~~~~~~al~~~~~-~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 160 YFSMDYARQAYEIYKE-HEA-YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp HHHHHHHHHHHHHHHT-CST-THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-Ccc-chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 5789999999999875 333 2445555555544555558999999998888876543
No 43
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=83.52 E-value=15 Score=29.25 Aligned_cols=57 Identities=7% Similarity=0.010 Sum_probs=37.8
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
.+..++....+.|+|++++.++.++++.+|.. .+=...+..+|-. .+....|...+.
T Consensus 7 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~g~~~~A~~~~~ 63 (217)
T 2pl2_A 7 NPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQLK-LGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 34567777888899999999999999987764 4444555555533 344444444443
No 44
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=83.29 E-value=7.9 Score=26.75 Aligned_cols=53 Identities=6% Similarity=-0.031 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+... .++.+|.......+.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFK-EEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 4688899999988653 445555445566677766665 7999999887766665
No 45
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=83.01 E-value=17 Score=29.38 Aligned_cols=63 Identities=11% Similarity=-0.024 Sum_probs=41.9
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCC--HHHHHHHHHHHHhhhhhhhHHHHHHHHHh
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELT--VEERNLLSVAYKNVIGARRASWRIISSIE 77 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs--~EERnLLSvAYKn~i~~~R~s~R~l~~ie 77 (248)
.+.+..++......|+|++++..+++++...|.-. .+=...+..+|-. .+....|...+....
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 79 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFI 79 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHH
Confidence 45566778888888999999999988888766543 4445555555543 355566666665443
No 46
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=82.90 E-value=1.7 Score=32.94 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHhhcC---CCC-------CcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTEL---PPT-------HPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L---~pt-------~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+..... .|+ +|....+.+|.+..|+. +|+.++|+..+.+|+.
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHh
Confidence 578999999998864321 233 56777788888887776 7999999998888754
No 47
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=82.83 E-value=20 Score=30.15 Aligned_cols=128 Identities=14% Similarity=0.105 Sum_probs=66.7
Q ss_pred HhhHHHHhcCHHHHHHHHHHHhhcCCCC-CHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHHHHHHH
Q psy11573 20 LSHFRFLFRLFSEMVEAMKKVASLDVEL-TVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIRQYRTQ 98 (248)
Q Consensus 20 ~a~laeqaeRydDmv~~mK~li~~~~eL-s~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~k 98 (248)
++.+....|+|++++.+++++++.+|.. +..-...+..+|-. .+... +.+..|++-
T Consensus 183 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~-~g~~~----------------------~A~~~~~~a 239 (365)
T 4eqf_A 183 MSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL-SGEFN----------------------RAIDAFNAA 239 (365)
T ss_dssp ------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH-HTCHH----------------------HHHHHHHHH
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH-CCCHH----------------------HHHHHHHHH
Confidence 3556667899999999999999987763 34333333333321 11111 222333332
Q ss_pred hhhhhHhhhhhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHh
Q psy11573 99 VRPPCIRILAHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEIL 178 (248)
Q Consensus 99 Ie~EC~eii~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil 178 (248)
+... +.... .+...|..|... |+ .+.|...|++|+++ .|.+ .....|.+..|+. +
T Consensus 240 l~~~-----p~~~~-~~~~l~~~~~~~-----g~-----~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~ 294 (365)
T 4eqf_A 240 LTVR-----PEDYS-LWNRLGATLANG-----DR-----SEEAVEAYTRALEI-----QPGF---IRSRYNLGISCIN-L 294 (365)
T ss_dssp HHHC-----TTCHH-HHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-H
T ss_pred HHhC-----CCCHH-HHHHHHHHHHHc-----CC-----HHHHHHHHHHHHhc-----CCCc---hHHHHHHHHHHHH-C
Confidence 2221 11001 111222222211 11 25789999999876 3333 3344555555554 7
Q ss_pred CChHHHHHHHHHHHHHH
Q psy11573 179 NSPDRACRLAKAAFDDA 195 (248)
Q Consensus 179 ~~~~~A~~iAk~afd~a 195 (248)
|+.++|+...++|+.-.
T Consensus 295 g~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 295 GAYREAVSNFLTALSLQ 311 (365)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 99999999988888755
No 48
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=82.27 E-value=19 Score=29.47 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=38.4
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
...++.+....|+|++++.+++++++.+|. +.+-...+..+|-. .+....|...+..
T Consensus 123 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 179 (359)
T 3ieg_A 123 LRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKA 179 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 345577888889999999999999887664 44555555555544 3455556655544
No 49
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=81.19 E-value=23 Score=29.57 Aligned_cols=59 Identities=8% Similarity=-0.037 Sum_probs=41.5
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
.+.+..++......|+|++++.+++++++.+|. +.+=...+..+|.. .+....|...+.
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 445678888899999999999999999998766 34445555555543 344455555554
No 50
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=80.75 E-value=4.8 Score=29.84 Aligned_cols=46 Identities=17% Similarity=0.121 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+++ .|.+| .+..|.+..|+. +|+.++|+...++|+.
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHHHHHHHHHHHH
Confidence 5688899998864 34444 455666666666 7999999887777654
No 51
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=80.65 E-value=5.4 Score=28.50 Aligned_cols=55 Identities=16% Similarity=-0.011 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
+.|...|++|++++... .+|..++.+++.-...|-.+|+.++|+...+++++-+-
T Consensus 26 ~~A~~~~~~al~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 26 RDAVIAHEQRLLIAKEF---GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 57888999999888641 24445555555444444458999999998888877553
No 52
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=80.59 E-value=20 Score=28.56 Aligned_cols=45 Identities=18% Similarity=0.177 Sum_probs=33.7
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhh
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNV 62 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~ 62 (248)
+..++.+..+.|+|++++.+++++++.+|.. .+=...+..+|...
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~~~ 86 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYVAL 86 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHh
Confidence 4456777788999999999999999998874 44555566665543
No 53
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=80.49 E-value=25 Score=29.63 Aligned_cols=38 Identities=8% Similarity=-0.068 Sum_probs=28.1
Q ss_pred hhhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 10 YLADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 10 ~~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
+-.+++.+.+.+.+....++|++++.++.++++..+.+
T Consensus 32 ~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~ 69 (307)
T 2ifu_A 32 YDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANN 69 (307)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 44456667777777888899999999998888764433
No 54
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=80.18 E-value=20 Score=28.26 Aligned_cols=58 Identities=10% Similarity=0.012 Sum_probs=37.9
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
+-+..++......|+|++++.+++++++.+|.. .+-...+..+|.. .+..-.|...+.
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 335577777888899999999999999876653 4444445555433 344444555543
No 55
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=80.07 E-value=26 Score=29.47 Aligned_cols=53 Identities=15% Similarity=0.016 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++|+.+... .+ +|...+.+++.-...|.-.|+.++|+...++|+.-
T Consensus 244 ~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 296 (406)
T 3sf4_A 244 ETASEYYKKTLLLARQ-LK--DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 296 (406)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-Cc--CchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4677777777777653 21 23333433333333444467777777777666554
No 56
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=79.83 E-value=27 Score=29.62 Aligned_cols=55 Identities=11% Similarity=0.041 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++|+.++...-.+.+|.......|.+..+++ .|+.++|....++++.-
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWA-WARLDEAEASARSGIEV 164 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHH
Confidence 46788888888888654444456555555666666666 58888888877777653
No 57
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=78.43 E-value=25 Score=28.38 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHh--------------hhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLA--------------LNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLa--------------LN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.+.|...|++++.. .|.+|...... ++.+..|+. .|+.++|+...++++.
T Consensus 113 ~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 113 TRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYER-RELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 45677777777653 34555433322 566666665 7999999988777654
No 58
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=78.36 E-value=4.6 Score=35.62 Aligned_cols=54 Identities=15% Similarity=0.137 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhhc-CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTE-LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~-L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|.+.|++|+++.+.. ....||-.+....|.+.-|+. +|+.++|+..-+++..
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~A~~~~~ka~~ 122 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSDVQIYVDKVKH 122 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHH
Confidence 57999999999998653 345677777777788877776 7999999877666543
No 59
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=78.10 E-value=16 Score=25.90 Aligned_cols=55 Identities=16% Similarity=0.087 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
.+.|...|++|++++.. .+ .+|.......+.+..+ .-+|+.++|+...++++.-+
T Consensus 105 ~~~A~~~~~~a~~~~~~-~~-~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 105 YEKAIDYHLKHLAIAQE-LK-DRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEIS 159 (164)
T ss_dssp HHHHHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cc-chHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHH
Confidence 35789999999998864 22 2233333444555544 44799999999888877654
No 60
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.57 E-value=26 Score=28.14 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=24.6
Q ss_pred CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 159 THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 159 t~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
.+|.......+.+..|+. +|+.++|+...++|+.-
T Consensus 273 ~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~l 307 (311)
T 3nf1_A 273 DSPTVTTTLKNLGALYRR-QGKFEAAETLEEAAMRS 307 (311)
T ss_dssp -CHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHH
Confidence 456655566666666555 79999999988887754
No 61
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=77.50 E-value=33 Score=29.25 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
.+.|...|++|+.++... +.++.......+.+.. |..+|+.++|+...++++.-+
T Consensus 279 ~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 279 FEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNT-YTLLHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp HHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHH
Confidence 357899999999988652 2223333344444444 455899999999988887654
No 62
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=77.43 E-value=7.2 Score=28.70 Aligned_cols=53 Identities=6% Similarity=-0.017 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+++... .++.++.+-....|.+.. |.-+++.++|++.-++|+.
T Consensus 59 ~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~lg~~-~~~~~~~~~A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGRE-TRADYKLIAKAMSRAGNA-FQKQNDLSLAVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHH-HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc-cchhhHHHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHh
Confidence 5789999999998753 455544433344455555 4558999999986655543
No 63
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=77.27 E-value=28 Score=28.27 Aligned_cols=56 Identities=11% Similarity=-0.110 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCC-cchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTH-PIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~-pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
.+.|...|++|+.+....-.+.+ |.......+.+..++. +|+.++|+...++++..
T Consensus 209 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 209 WKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRK-LKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 35789999999988754333222 2233344555555544 79999999888887653
No 64
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=77.08 E-value=23 Score=27.38 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=17.7
Q ss_pred HHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 18 QQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 18 ~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
..++.+....|+|++++.++++++...|.
T Consensus 61 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 89 (243)
T 2q7f_A 61 INFANLLSSVNELERALAFYDKALELDSS 89 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 34455555666677776666666665543
No 65
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=76.21 E-value=8.6 Score=26.20 Aligned_cols=45 Identities=13% Similarity=0.194 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al 65 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALIK-LGEYTQAIQMCQQGL 65 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 5788999999865 34444 345566666665 799999988776665
No 66
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=75.72 E-value=34 Score=28.62 Aligned_cols=29 Identities=0% Similarity=0.021 Sum_probs=20.9
Q ss_pred HHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 18 QQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 18 ~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
..++.+-+..|+++++...+.++++..|.
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 131 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAIEDI 131 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhcccc
Confidence 35566666778888888888888876554
No 67
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=75.67 E-value=38 Score=29.13 Aligned_cols=60 Identities=7% Similarity=0.078 Sum_probs=39.1
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+.+..++....+.|+|++++.++.++++.+|. +..-...+..+|-. .+....|...+..
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 85 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLA-MGKSKAALPDLTK 85 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 344556777778889999999999998887665 34444555555543 3455556655543
No 68
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=75.65 E-value=12 Score=31.35 Aligned_cols=65 Identities=20% Similarity=0.169 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHh
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKD 209 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~d 209 (248)
+.|...|++|++++.. ..++..++.+++.--..|.-+|+.++|+ ...|+.|+.-.+.+....+++
T Consensus 213 ~~Al~~~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~Ai---~~~~~~Al~~~~~~~~~~~~~ 277 (293)
T 2qfc_A 213 EESLYQVNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEAEI---EDAYKKASFFFDILEMHAYKE 277 (293)
T ss_dssp HHHHHHHHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHHHH---HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHHHH---HHHHHHHHHHHHHhCcHhhHH
Confidence 5799999999999853 2344456655555555566689999994 233444444445555555533
No 69
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=75.19 E-value=11 Score=24.62 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~~-~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 5688899998865 34443 344566666555 7999999988777765
No 70
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.08 E-value=10 Score=28.77 Aligned_cols=55 Identities=9% Similarity=0.039 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
+.|...|++|+.++.. .+ .+|...+.+++.-...|-.+|++++|+...++++.-+
T Consensus 83 ~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 83 DAARRCFLEERELLAS-LP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 5789999999999863 43 2454455554444444455899999999999888754
No 71
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=73.74 E-value=15 Score=25.80 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLR 218 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLr 218 (248)
+.|...|++++.. .|.+|......++.+..++. +|+.++|+..-++++... -+......+...+..|+
T Consensus 56 ~~A~~~~~~~~~~-----~p~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~~~~~------p~~~~~~~a~~~l~~l~ 123 (129)
T 2xev_A 56 QLAEAQFRDLVSR-----YPTHDKAAGGLLKLGLSQYG-EGKNTEAQQTLQQVATQY------PGSDAARVAQERLQSIR 123 (129)
T ss_dssp HHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHS------TTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHC------CCChHHHHHHHHHHHHH
Confidence 5688888888754 46776655556666666665 899999988776665432 11222344555555555
Q ss_pred hhH
Q psy11573 219 DNL 221 (248)
Q Consensus 219 DNL 221 (248)
.++
T Consensus 124 ~~~ 126 (129)
T 2xev_A 124 LGQ 126 (129)
T ss_dssp ---
T ss_pred hhh
Confidence 443
No 72
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=73.62 E-value=11 Score=26.83 Aligned_cols=47 Identities=13% Similarity=0.252 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++|+++ .|.+ ..+..|.+..++. +|+.++|+...++++..
T Consensus 44 ~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNH---QALRVFYAMVLYN-LGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCc---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Confidence 5788899998865 3444 4456667766666 79999999988888764
No 73
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=73.48 E-value=29 Score=26.79 Aligned_cols=58 Identities=10% Similarity=-0.045 Sum_probs=25.7
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+..++......|+|++++.+++++++.+|.- .+-...+..+|-. .+....|...+..
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~~ 82 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKED-AIPYINFANLLSS-VNELERALAFYDK 82 (243)
T ss_dssp -----------------CCTTHHHHHTTCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 45567777888899999999999999876653 4444455555532 4455556555543
No 74
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=72.92 E-value=45 Score=28.67 Aligned_cols=57 Identities=11% Similarity=-0.094 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
.++|...|++|..++.. .+ ..|.-.|...+...-+|...++.++|+..-.++|...-
T Consensus 191 ~~~A~~~~~~al~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~ 247 (434)
T 4b4t_Q 191 LAKSKASLTAARTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFESYH 247 (434)
T ss_dssp HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 35789999999998764 43 22334466666666777778999999998888887654
No 75
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=72.70 E-value=13 Score=24.81 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+ .....+.+..++. +|+.++|+...++++.
T Consensus 23 ~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 68 (112)
T 2kck_A 23 TESIDLFEKAIQL-----DPEE---SKYWLMKGKALYN-LERYEEAVDCYNYVIN 68 (112)
T ss_dssp HHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 5688889888865 2333 3445666766666 7999999887777664
No 76
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=71.70 E-value=50 Score=28.73 Aligned_cols=157 Identities=12% Similarity=0.034 Sum_probs=81.7
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHHH
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIRQ 94 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~~ 94 (248)
..+..++.+....|+|++++.+++++++.+|. .+-...+..+|.. .+....+...+.......... ......+..-
T Consensus 238 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~~~--~~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~ 313 (514)
T 2gw1_A 238 ISLEHTGIFKFLKNDPLGAHEDIKKAIELFPR--VNSYIYMALIMAD-RNDSTEYYNYFDKALKLDSNN-SSVYYHRGQM 313 (514)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHT-SSCCTTGGGHHHHHHTTCTTC-THHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc--HHHHHHHHHHHHH-CCCHHHHHHHHHHHhhcCcCC-HHHHHHHHHH
Confidence 34456677777889999999999999998887 6656666666644 334444544444332221111 0111111111
Q ss_pred HHHHhhhh-----hHhhh---hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q psy11573 95 YRTQVRPP-----CIRIL---AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGL 166 (248)
Q Consensus 95 yr~kIe~E-----C~eii---~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgL 166 (248)
|...=.-+ ...++ +.. ...+...|..|.. .|+ .+.|...|++++.. .|.+| ..
T Consensus 314 ~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-----~~~-----~~~A~~~~~~~~~~-----~~~~~---~~ 374 (514)
T 2gw1_A 314 NFILQNYDQAGKDFDKAKELDPEN-IFPYIQLACLAYR-----ENK-----FDDCETLFSEAKRK-----FPEAP---EV 374 (514)
T ss_dssp HHHTTCTTHHHHHHHHHHHTCSSC-SHHHHHHHHHTTT-----TTC-----HHHHHHHHHHHHHH-----STTCS---HH
T ss_pred HHHhCCHHHHHHHHHHHHHhChhh-HHHHHHHHHHHHH-----cCC-----HHHHHHHHHHHHHH-----cccCH---HH
Confidence 11110000 11222 111 1112222332221 111 35688888888764 34444 23
Q ss_pred hhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 167 ALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 167 aLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
..+.+..++ ..|+.++|+...++++...
T Consensus 375 ~~~la~~~~-~~~~~~~A~~~~~~a~~~~ 402 (514)
T 2gw1_A 375 PNFFAEILT-DKNDFDKALKQYDLAIELE 402 (514)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HCCCHHHHHHHHHHHHHhh
Confidence 344444444 4799999999988887654
No 77
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.59 E-value=9.7 Score=27.18 Aligned_cols=48 Identities=27% Similarity=0.209 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 140 NSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 140 ~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.|...|++|+. +.|.+|....+..+.+..++. +++.++|+...++++.
T Consensus 46 ~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~ 93 (148)
T 2dba_A 46 GALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDKAETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHh
Confidence 34445554442 334443334444444444443 4566665555555443
No 78
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=71.51 E-value=33 Score=26.58 Aligned_cols=31 Identities=3% Similarity=0.114 Sum_probs=20.2
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
+..++.+....|+|++++.++.++++..|..
T Consensus 41 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 71 (258)
T 3uq3_A 41 LNNRAAAEYEKGEYETAISTLNDAVEQGREM 71 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 4455666666777777777777777655443
No 79
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=71.29 E-value=26 Score=25.69 Aligned_cols=48 Identities=19% Similarity=0.100 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
+.|..+|++|+.+ .|.+|. ..+|.+..++. +|++++|+...++++...
T Consensus 69 ~~A~~~~~~al~~-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 69 EQALQSYSYGALM-----DINEPR---FPFHAAECHLQ-LGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHHHHH-----CTTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHHhC
Confidence 5689999999865 456663 34566665555 899999998877776544
No 80
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=70.77 E-value=56 Score=29.67 Aligned_cols=157 Identities=13% Similarity=0.026 Sum_probs=79.0
Q ss_pred hHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhh-hHHHHHHHHHhhhhhhhchhHHHHHHHHHHHH--
Q psy11573 22 HFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGAR-RASWRIISSIEQKEENKGAEDKLEMIRQYRTQ-- 98 (248)
Q Consensus 22 ~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~-R~s~R~l~~ieqke~~~~~~~~~~~i~~yr~k-- 98 (248)
+.....+++++++..+.++... .+-+.+-...+..+|-. .+.. ..|...+....+..... ......+-.-|...
T Consensus 76 ~~~~~~~~~~~al~~l~~~~~~-~~~~a~~~~~lg~~~~~-~g~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~g~ 152 (474)
T 4abn_A 76 KQQDVQEEMEKTLQQMEEVLGS-AQVEAQALMLKGKALNV-TPDYSPEAEVLLSKAVKLEPEL-VEAWNQLGEVYWKKGD 152 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHTS-SSSCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHh-ccccHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHcCC
Confidence 3445556788888888876654 34566666777777654 4555 66666665432221110 11111111222111
Q ss_pred hhhh---hHhhh---hhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHH
Q psy11573 99 VRPP---CIRIL---AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSV 172 (248)
Q Consensus 99 Ie~E---C~eii---~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SV 172 (248)
.++- +...+ +. ...+...|..|+.+.. ....++..-.+.|...|++|+++ .|.+|. ...|.+.
T Consensus 153 ~~~A~~~~~~al~~~p~--~~~~~~lg~~~~~~~~-~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~---~~~~lg~ 221 (474)
T 4abn_A 153 VTSAHTCFSGALTHCKN--KVSLQNLSMVLRQLQT-DSGDEHSRHVMDSVRQAKLAVQM-----DVLDGR---SWYILGN 221 (474)
T ss_dssp HHHHHHHHHHHHTTCCC--HHHHHHHHHHHTTCCC-SCHHHHHHHHHHHHHHHHHHHHH-----CTTCHH---HHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC--HHHHHHHHHHHHHhcc-CChhhhhhhHHHHHHHHHHHHHh-----CCCCHH---HHHHHHH
Confidence 1110 33333 34 2445556666655422 12223334467899999999875 345542 2333444
Q ss_pred HHHHHh--------CChHHHHHHHHHHHH
Q psy11573 173 FYYEIL--------NSPDRACRLAKAAFD 193 (248)
Q Consensus 173 F~yEil--------~~~~~A~~iAk~afd 193 (248)
.|.. + |+.++|+...++|+.
T Consensus 222 ~~~~-~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 222 AYLS-LYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHH-HHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHhhccccchHHHHHHHHHHHHH
Confidence 4333 2 566677666555544
No 81
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=70.28 E-value=17 Score=24.51 Aligned_cols=47 Identities=19% Similarity=0.136 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|++. .|.+|.. ...+.+..++. +|+.++|+...++++.
T Consensus 17 ~~A~~~~~~al~~-----~p~~~~~--~~~~lg~~~~~-~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 17 ENALQALEEFLQT-----EPVGKDE--AYYLMGNAYRK-LGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHHHHHHHHHH-----CSSTHHH--HHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHHH--HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 5688888888764 3444420 45666666665 7999999887777664
No 82
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=69.89 E-value=18 Score=25.24 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++++. ..|.+|..-...++.+..++. .|+.++|+...++++.
T Consensus 19 ~~A~~~~~~~~~-----~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 19 DDASQLFLSFLE-----LYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHHHHHH-----HCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----HCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 467777777764 346778655566666666665 7999999988887765
No 83
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.45 E-value=21 Score=39.11 Aligned_cols=148 Identities=14% Similarity=0.115 Sum_probs=73.4
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC--CCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVE--LTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKLEMIR 93 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~e--Ls~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~~~i~ 93 (248)
.+...+..++++|+|+++++++....+..++ ...+ |..+|-.. +. +..+....+. .+. .
T Consensus 1136 ay~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~----LafaYAKl-~r----leele~fI~~----~n~------a 1196 (1630)
T 1xi4_A 1136 SYMEVVQAANTSGNWEELVKYLQMARKKARESYVETE----LIFALAKT-NR----LAELEEFING----PNN------A 1196 (1630)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHH----HHHHHHhh-cC----HHHHHHHHhC----CCH------H
Confidence 4455677777788888888888776654322 3333 45555443 21 1112211110 010 1
Q ss_pred HHHHHhhhhhHhh--hhhHHHHHHHhhcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhh-----------------
Q psy11573 94 QYRTQVRPPCIRI--LAHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMT----------------- 154 (248)
Q Consensus 94 ~yr~kIe~EC~ei--i~eskvFy~KmKGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~----------------- 154 (248)
+|. .+-.-|.+- ..+++.||.+. ++|.| ++....--. -.+.|.++|.+|......
T Consensus 1197 d~~-~iGd~le~eg~YeeA~~~Y~kA-~ny~r-LA~tLvkLg---e~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~ 1270 (1630)
T 1xi4_A 1197 HIQ-QVGDRCYDEKMYDAAKLLYNNV-SNFGR-LASTLVHLG---EYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQ 1270 (1630)
T ss_pred HHH-HHHHHHHhcCCHHHHHHHHHhh-hHHHH-HHHHHHHhC---CHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHH
Confidence 111 122223221 16788888885 34444 444332110 144555555555322110
Q ss_pred --cC-CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 155 --EL-PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 155 --~L-~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
.+ -..||- -|.-.+-+|+-.|..++||.+..+|+
T Consensus 1271 ~cgl~Iiv~~d----eLeeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1271 MCGLHIVVHAD----ELEELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred HHHHhhhcCHH----HHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 00 001222 23355678899999999999999883
No 84
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=68.40 E-value=62 Score=28.47 Aligned_cols=53 Identities=13% Similarity=0.091 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhh--cCCCCCcc---hHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 141 SLVAYKSASDIAMT--ELPPTHPI---RLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 141 A~~aY~~A~~~a~~--~L~pt~pi---rLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+...|.+|....+. .+.|.+|- .++.++..--..|...|+.++|+...++++.
T Consensus 214 a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~ 271 (537)
T 3fp2_A 214 ANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESIN 271 (537)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34455555544433 45566653 2455565555566668999999998888765
No 85
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=68.25 E-value=53 Score=27.56 Aligned_cols=51 Identities=4% Similarity=-0.089 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
+.|...|++|+.+... .+. +...+.++.-....|-.+|+.++|+...++++
T Consensus 172 ~~A~~~~~~al~~~~~-~~~--~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKE-MEN--YPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TTC--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH-cCC--hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 5789999999998764 222 22333233333445555799999988766654
No 86
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=68.20 E-value=41 Score=26.32 Aligned_cols=56 Identities=9% Similarity=-0.150 Sum_probs=35.8
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
+..++.+....|+|++++.+++++++.+|.- ..-...+..+|-. .+....|.+.+.
T Consensus 74 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~~-~g~~~~A~~~~~ 129 (252)
T 2ho1_A 74 HAALAVVFQTEMEPKLADEEYRKALASDSRN-ARVLNNYGGFLYE-QKRYEEAYQRLL 129 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-HHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 4566777888999999999999999887653 3333444444432 333444444443
No 87
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=67.02 E-value=18 Score=25.56 Aligned_cols=46 Identities=20% Similarity=0.086 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+| .+..|.+..++. +|+.++|+...++++.
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 21 PNAVKAYTEMIKR-----APEDA---RGYSNRAAALAK-LMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 4567777777654 23333 344444544444 6777777776666654
No 88
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=66.66 E-value=26 Score=24.70 Aligned_cols=58 Identities=7% Similarity=-0.031 Sum_probs=43.2
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
-+..++.+....|+|++++.+++++++.+|.. .+=...+..+|-. .+....|...+..
T Consensus 29 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 29 CYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 35577778888999999999999999998875 5556666766655 4556666666653
No 89
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=66.51 E-value=20 Score=24.82 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 67 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 67 QLALKDCEECIQL-----EPTFI---KGYTRKAAALEA-MKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-HhhHHHHHHHHHHHHHh
Confidence 4678888888865 33343 344556655554 79999998887776653
No 90
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=66.12 E-value=75 Score=28.54 Aligned_cols=47 Identities=9% Similarity=0.092 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.+.|...|++++++ .|.+| ....+.+. .|...|+.++|....+++++
T Consensus 532 ~~~A~~~~~~~~~~-----~p~~~---~~~~~l~~-~~~~~g~~~~A~~~~~~~l~ 578 (597)
T 2xpi_A 532 YDAAIDALNQGLLL-----STNDA---NVHTAIAL-VYLHKKIPGLAITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHHH-----SSCCH---HHHHHHHH-HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCCh---HHHHHHHH-HHHHhCCHHHHHHHHHHHHh
Confidence 45788888888765 25555 23333333 34458999999988877765
No 91
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=65.85 E-value=19 Score=26.45 Aligned_cols=46 Identities=9% Similarity=0.032 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+++ .|.+| ....|.+..++. +|+.++|+..-++|+.
T Consensus 64 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~-~~~~~~A~~~~~~al~ 109 (126)
T 4gco_A 64 QRALDDCDTCIRL-----DSKFI---KGYIRKAACLVA-MREWSKAQRAYEDALQ 109 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hhhhh---HHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 5688999999865 44444 344555665555 8999999877666554
No 92
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=65.74 E-value=30 Score=23.90 Aligned_cols=57 Identities=9% Similarity=0.054 Sum_probs=41.2
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
.+..++.+....|+|++++.+++++++.+|.... =...+..+|.. .+..-.|...+.
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~~ 65 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHHH
Confidence 3457788888999999999999999999888554 45566777654 344445555543
No 93
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=65.58 E-value=19 Score=27.13 Aligned_cols=47 Identities=9% Similarity=-0.015 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|..+|++|+.+ .|.||. ..+|.++.|+. +|+.++|+...++++.-
T Consensus 72 ~~A~~~~~~al~l-----~p~~~~---~~~~lg~~~~~-~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 72 DLAIHSYSYGAVM-----DIXEPR---FPFHAAECLLQ-XGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCch---HHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Confidence 5789999999865 455653 34566666665 79999998766666543
No 94
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=65.31 E-value=48 Score=26.06 Aligned_cols=56 Identities=11% Similarity=0.079 Sum_probs=32.5
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
+..++.+....|+|++++.+++++++.+|. +.+=...+..+|.. .+....|...+.
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~ 101 (275)
T 1xnf_A 46 LYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQ-AGNFDAAYEAFD 101 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHH-ccCHHHHHHHHH
Confidence 445666666677777777777777776655 33444455555533 344444444443
No 95
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=64.82 E-value=78 Score=28.29 Aligned_cols=55 Identities=7% Similarity=-0.044 Sum_probs=35.4
Q ss_pred HHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 19 QLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 19 ~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
.++.+....|+|++++.++.+++..+|.. .+=.+.+..+|...=.....+...+.
T Consensus 102 ~lg~~~~~~g~~~~Al~~~~~al~l~P~~-~~a~~~~g~~l~~~g~d~~eAl~~~~ 156 (382)
T 2h6f_A 102 YFRAVLQRDERSERAFKLTRDAIELNAAN-YTVWHFRRVLLKSLQKDLHEEMNYIT 156 (382)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHCCChHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHcccCHHHHHHHHH
Confidence 44556667799999999999999998874 34445555555443112445554443
No 96
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=64.80 E-value=1.1e+02 Score=30.07 Aligned_cols=44 Identities=9% Similarity=0.057 Sum_probs=32.4
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKN 61 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn 61 (248)
+..++.+..+.|+|++++.+++++++.+|+. .+=.+-|..+|..
T Consensus 46 ~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~-~~a~~nLg~~l~~ 89 (723)
T 4gyw_A 46 HSNLASVLQQQGKLQEALMHYKEAIRISPTF-ADAYSNMGNTLKE 89 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 3456777788899999999999999998875 3344445555543
No 97
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=64.73 E-value=21 Score=25.20 Aligned_cols=17 Identities=24% Similarity=0.184 Sum_probs=8.1
Q ss_pred hCChHHHHHHHHHHHHH
Q psy11573 178 LNSPDRACRLAKAAFDD 194 (248)
Q Consensus 178 l~~~~~A~~iAk~afd~ 194 (248)
+|+.++|+...++++..
T Consensus 90 ~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 90 MESYDEAIANLQRAYSL 106 (137)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHH
Confidence 45555555444444443
No 98
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=64.55 E-value=22 Score=28.69 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHH-----HhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLG-----LALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLg-----LaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
-+.|..+|++|+++.-. .|+..++.+. .-.|-+.-+.. +|+.++|+.-+.+|+.
T Consensus 27 ~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 27 YDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
Confidence 35799999999998754 3333333333 66666665555 8999999988777765
No 99
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=64.29 E-value=19 Score=26.91 Aligned_cols=26 Identities=4% Similarity=0.047 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 167 ALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 167 aLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
..|.+..|+. +|+.++|+...++++.
T Consensus 82 ~~~lg~~~~~-~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 82 WSRLGLARFD-MADYKGAKEAYEKGIE 107 (164)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 3444444444 5777766665555543
No 100
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=64.12 E-value=17 Score=31.30 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
+.|...|++|+++++. .+ +|..++.+++.--..|..+|+.++|+...++|++-+
T Consensus 199 ~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 199 DKALPHLEAALELAMD-IQ--NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5788899999988864 32 333455444443334444789999888888877643
No 101
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=64.08 E-value=24 Score=24.11 Aligned_cols=49 Identities=20% Similarity=0.356 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
+.|...|++|+.. .|.+| .+..+.+..++. +|+.++|+...++++...-
T Consensus 21 ~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 21 DTALKHYDKAKEL-----DPTNM---TYITNQAAVYFE-KGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHhhcc
Confidence 5688888888865 23443 344566666555 7999999999888877653
No 102
>2kke_A Uncharacterized protein; protein northeast structural genomics consortium (NESG), target TR5, PSI-2; NMR {Methanothermobacter thermautotrophicusstr}
Probab=63.37 E-value=1 Score=29.68 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=31.0
Q ss_pred cccchhhhhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCH
Q psy11573 4 DRLLGGYLADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTV 49 (248)
Q Consensus 4 ~~~~~~~~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~ 49 (248)
.|+|||-|.|-.+++-+. |.|-++++|.-+-.+..+|.
T Consensus 3 grrpggglkdtkpvvvrl--------ypdeiealksrvpantsmsa 40 (53)
T 2kke_A 3 GRRPGGGLKDTKPVVVRL--------YPDEIEALKSRVPANTSMSA 40 (53)
T ss_dssp SCCCSSTTTSSEEEEEEE--------CHHHHHHHHTTCCSSSCHHH
T ss_pred ccCCCCCcccCCceEEEe--------ChhHHHHHHhcCCCcccHHH
Confidence 479999999999988776 99999999987766655543
No 103
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=63.26 E-value=21 Score=26.91 Aligned_cols=46 Identities=20% Similarity=0.291 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|..+|++|+++ .|.|| ....+.+..|+. +|+.++|+...+++..
T Consensus 22 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~~~~~~a~~~~~~~~~ 67 (184)
T 3vtx_A 22 DGAIRAYKKVLKA-----DPNNV---ETLLKLGKTYMD-IGLPNDAIESLKKFVV 67 (184)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-CCCHHHHHHHHHHHHh
Confidence 5789999999865 35554 333444444444 7888888887777643
No 104
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=63.15 E-value=24 Score=24.90 Aligned_cols=48 Identities=10% Similarity=0.025 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.-.
T Consensus 55 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 55 PEAIADCNKAIEK-----DPNFV---RAYIRKATAQIA-VKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-HhCHHHHHHHHHHHHHhC
Confidence 4688999999865 34443 344555555555 799999998888887654
No 105
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=61.82 E-value=31 Score=23.97 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
+.|...|++|+.+ .|.++ ....+.+..+.. +|+.++|+...++++...
T Consensus 36 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYS---VAWKWLGKTLQG-QGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhc
Confidence 5688899998865 34443 334555555555 799999999888877654
No 106
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=61.36 E-value=19 Score=27.86 Aligned_cols=46 Identities=11% Similarity=0.058 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|..+|++|+.+ .|.||. ...|.++.|+. +|++++|+..-++|+.
T Consensus 87 ~~Ai~~~~~al~l-----~P~~~~---~~~~lg~~~~~-lg~~~eA~~~~~~al~ 132 (151)
T 3gyz_A 87 QQAADLYAVAFAL-----GKNDYT---PVFHTGQCQLR-LKAPLKAKECFELVIQ 132 (151)
T ss_dssp HHHHHHHHHHHHH-----SSSCCH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CCCCcH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5789999999865 455663 44566666655 8999999886666554
No 107
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=61.01 E-value=25 Score=23.53 Aligned_cols=45 Identities=13% Similarity=-0.017 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
+.|...|++++.+ .|.+| ....+.+..++. +|+.++|+...++++
T Consensus 55 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~ 99 (118)
T 1elw_A 55 QKAYEDGCKTVDL-----KPDWG---KGYSRKAAALEF-LNRFEEAKRTYEEGL 99 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-HhhHHHHHHHHHHHH
Confidence 4678888888765 34443 344566655544 899999988766654
No 108
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=60.98 E-value=51 Score=24.85 Aligned_cols=56 Identities=9% Similarity=0.014 Sum_probs=34.2
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRII 73 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l 73 (248)
+..++.+....|+|++++.++.+++..+|.. ..-...+..+|-...+....+...+
T Consensus 45 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~~~~~~~A~~~~ 100 (225)
T 2vq2_A 45 WLVRAEIYQYLKVNDKAQESFRQALSIKPDS-AEINNNYGWFLCGRLNRPAESMAYF 100 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3456677778899999999999999887653 3333334444433213333344443
No 109
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=60.57 E-value=30 Score=23.46 Aligned_cols=47 Identities=17% Similarity=0.074 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++++.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 63 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 63 AGAVQDCERAICI-----DPAYS---KAYGRMGLALSS-LNKHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CccCH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHhc
Confidence 4678888888864 34443 334455555554 79999999887776653
No 110
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=60.35 E-value=89 Score=27.44 Aligned_cols=49 Identities=12% Similarity=0.147 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
.+.|...|++|+++ .|.+| ....+.+..|+. +|+.++|+...+++++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQLKLQ-MEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-hccHHHHHHHHHHHHHhC
Confidence 45778888888765 34554 344555555554 899999999888877654
No 111
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=60.31 E-value=39 Score=23.31 Aligned_cols=71 Identities=15% Similarity=0.120 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhhccCCcccHHhHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLR 218 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~ld~l~ee~y~ds~~ilqLLr 218 (248)
+.|...|++|+++ .|.+|. ...+.+..|+. +|+.++|+...++++.-+-.. ....-...+.++|+
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~~~~-~g~~~~A~~~~~~al~l~~~~------~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKLYER-LDRTDDAIDTYAQGIEVAREE------GTQKDLSELQDAKL 88 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHhhhhcC------CchhHHHHHHHHHH
Confidence 5788899988865 344443 44555555544 899999999888887765322 12333445555555
Q ss_pred hhHhhh
Q psy11573 219 DNLTLW 224 (248)
Q Consensus 219 DNL~lW 224 (248)
..=..|
T Consensus 89 ~~~~~~ 94 (100)
T 3ma5_A 89 KAEGLE 94 (100)
T ss_dssp HHHTTC
T ss_pred Hccccc
Confidence 444444
No 112
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=60.20 E-value=31 Score=23.40 Aligned_cols=47 Identities=19% Similarity=0.154 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|+...++++..
T Consensus 29 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 29 EAAVHFYGKAIEL-----NPANA---VYFCNRAAAYSK-LGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHH-hhchHHHHHHHHHHHhc
Confidence 4678888888765 23332 334455555554 79999999988888763
No 113
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=60.11 E-value=66 Score=25.87 Aligned_cols=46 Identities=13% Similarity=0.004 Sum_probs=25.3
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAY 59 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAY 59 (248)
+.+.+..++......|+|++++.+++++++.+|. +.+-...+..+|
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~ 65 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQ 65 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 4445556666666666666666666666665544 333333444443
No 114
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=59.61 E-value=34 Score=22.79 Aligned_cols=47 Identities=21% Similarity=0.199 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++|+.. .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 21 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 21 DDALQCYSEAIKL-----DPHNH---VLYSNRSAAYAK-KGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcH---HHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Confidence 5678888888764 34443 344555555554 79999999988887653
No 115
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=58.91 E-value=30 Score=25.00 Aligned_cols=46 Identities=11% Similarity=-0.106 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 64 ~~A~~~~~~a~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 64 GYALGDATRAIEL-----DKKYI---KGYYRRAASNMA-LGKFRAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 4678888888765 23443 344555555554 7999999888777764
No 116
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.20 E-value=32 Score=24.24 Aligned_cols=46 Identities=11% Similarity=-0.057 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++++.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 82 ~~A~~~~~~~~~~-----~~~~~---~~~~~~a~~~~~-~~~~~~A~~~~~~al~ 127 (148)
T 2dba_A 82 DKAETEASKAIEK-----DGGDV---KALYRRSQALEK-LGRLDQAVLDLQRCVS 127 (148)
T ss_dssp HHHHHHHHHHHHH-----TSCCH---HHHHHHHHHHHH-HTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh-----CccCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 4688888888865 34443 344556655555 7999999887776654
No 117
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=58.06 E-value=44 Score=23.15 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=41.6
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+..++.+....|+|++++.++++++..+|.. .+=...+..+|.. .+....|...+..
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~~ 78 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWES 78 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 34567778888999999999999999988764 4455566666655 3555556555543
No 118
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=57.68 E-value=28 Score=29.07 Aligned_cols=53 Identities=9% Similarity=-0.067 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|..+|++|+++... +. +|...+.+++-.-..|..+|++++|+...++|+.-
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5789999999998754 32 55555666666556666689999999888887654
No 119
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=57.02 E-value=64 Score=24.73 Aligned_cols=57 Identities=9% Similarity=-0.054 Sum_probs=33.1
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRII 73 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l 73 (248)
+.+..++....+.|+|++++.++++++..+|. +.+=...|..+|-. .+....|...+
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~-~g~~~~Ai~~~ 93 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQI-KEQFQQAADLY 93 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-HccHHHHHHHH
Confidence 34556666667777777777777777776654 34444455555543 33444444443
No 120
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=56.83 E-value=95 Score=26.66 Aligned_cols=32 Identities=16% Similarity=0.030 Sum_probs=26.2
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
.+..++......++|++++.++++++..+|..
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 180 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWLEYE 180 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc
Confidence 34456777788899999999999999987765
No 121
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=56.62 E-value=32 Score=25.74 Aligned_cols=46 Identities=9% Similarity=0.136 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
++|...|++|+++ .|.|| ..-.+.+..|+ .+|+.++|+..-++|+.
T Consensus 48 ~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~-~~~~~~~A~~~~~~al~ 93 (150)
T 4ga2_A 48 DLAKKYICTYINV-----QERDP---KAHRFLGLLYE-LEENTDKAVECYRRSVE 93 (150)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHH-HcCchHHHHHHHHHHHH
Confidence 4678888888764 34454 23344444444 47888888876666654
No 122
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=56.51 E-value=9.8 Score=33.99 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHhhc--------CCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTE--------LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~--------L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+.... ....+|....+.+|.+..|+. +++.++|+..+++|+.
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLK-MSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHh-ccCHHHHHHHHHHHHH
Confidence 46888888888765431 011456777778888877775 7888888888877764
No 123
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=56.17 E-value=41 Score=22.53 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++++.. .|.+| ....+.+..++. .|+.++|+...++++.
T Consensus 26 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CcCcH---HHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 3566666666643 22232 223344444443 5777777776666554
No 124
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=56.13 E-value=73 Score=25.14 Aligned_cols=44 Identities=7% Similarity=-0.028 Sum_probs=31.6
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCC--HHHHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELT--VEERNLLSVAY 59 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs--~EERnLLSvAY 59 (248)
.+..++......|+|++++..+++++...|.-. .+-...+..+|
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~ 51 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAY 51 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH
Confidence 455778888889999999999999998766432 33344444444
No 125
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=55.93 E-value=41 Score=22.50 Aligned_cols=47 Identities=19% Similarity=0.323 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
+.|...|++++.+ .|.+| ....+.+..++. +|+.++|+...++++..
T Consensus 60 ~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~-~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 60 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYYK-QGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHH-hcCHHHHHHHHHHHHHh
Confidence 4677888888754 33443 334556666655 79999998877776643
No 126
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=55.15 E-value=30 Score=28.72 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHH-hhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGL-ALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgL-aLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
+.|...|++|+.+.. +..++..... ..|.+++|+. +|+.++|+..-++|++.+
T Consensus 132 ~~Ai~~~~~al~~~~---~~~~~~~~~~~~~~lg~~y~~-~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 132 EYCILELKKLLNQQL---TGIDVYQNLYIENAIANIYAE-NGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHHTCC---CCSCTTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHH
Confidence 578999999998542 2333434343 4455555555 899999999999888644
No 127
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=54.76 E-value=37 Score=24.43 Aligned_cols=46 Identities=24% Similarity=0.204 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+ ..+..+.+..++. +|+.++|+...++++.
T Consensus 30 ~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~ 75 (166)
T 1a17_A 30 ENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLR-TECYGYALGDATRAIE 75 (166)
T ss_dssp HHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5688888888865 2333 3445556655555 7999999998887765
No 128
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=54.65 E-value=13 Score=26.58 Aligned_cols=31 Identities=10% Similarity=0.142 Sum_probs=23.6
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
-+.-++.++.+.|+|++++.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 3445667778888888888888888887777
No 129
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=54.51 E-value=34 Score=26.33 Aligned_cols=49 Identities=22% Similarity=0.304 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc-------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHP-------------IRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~p-------------irLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+. |.+| +...+..|.+..++. +|+.++|+...++++.
T Consensus 55 ~~A~~~~~~al~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 55 NEAIVKYKEALDFF-----IHTEEWDDQILLDKKKNIEISCNLNLATCYNK-NKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTT-----TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hcccccchhhHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHH
Confidence 46888888888654 2333 112455666666665 7999999888887765
No 130
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=54.11 E-value=26 Score=28.26 Aligned_cols=87 Identities=17% Similarity=0.217 Sum_probs=48.1
Q ss_pred hhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCc---chHHHhhhHHHHH----HHHhCChHHHHHHHHHHHHHHHH
Q psy11573 125 LAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHP---IRLGLALNFSVFY----YEILNSPDRACRLAKAAFDDAIA 197 (248)
Q Consensus 125 lAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~p---irLgLaLN~SVF~----yEil~~~~~A~~iAk~afd~ai~ 197 (248)
+..+..+.+..+..+.|..+|++|+++ .|.++ ..||.++.---++ -+-.++.++|+. +|+.|+.
T Consensus 49 l~~~~~g~~al~~~~eAi~~le~AL~l-----dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~----~~~kAl~ 119 (158)
T 1zu2_A 49 LSQFHSISDAKQMIQEAITKFEEALLI-----DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQ----FFQQAVD 119 (158)
T ss_dssp HHHHSCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----HHHHHHH
T ss_pred hcccchhhhhHhHHHHHHHHHHHHHHh-----CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHH----HHHHHHH
Confidence 455556666667789999999999875 34444 3355544321111 111245666665 5555553
Q ss_pred hhccCCcccHHhHHHHHHHHHhhHhhhh
Q psy11573 198 ELDTLSEDSYKDSTLIMQLLRDNLTLWT 225 (248)
Q Consensus 198 ~ld~l~ee~y~ds~~ilqLLrDNL~lW~ 225 (248)
++. + +.+...-+++..++-.+|.
T Consensus 120 -l~P-~---~~~y~~al~~~~ka~el~~ 142 (158)
T 1zu2_A 120 -EQP-D---NTHYLKSLEMTAKAPQLHA 142 (158)
T ss_dssp -HCT-T---CHHHHHHHHHHHTHHHHHH
T ss_pred -hCC-C---CHHHHHHHHHHHhCHhccC
Confidence 221 1 2344445566666666665
No 131
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=53.71 E-value=1.3e+02 Score=27.41 Aligned_cols=30 Identities=10% Similarity=-0.096 Sum_probs=24.8
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
+..++.+..+.|+|++++.+++++++.+|.
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 55 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLALHPG 55 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 456677777889999999999999988765
No 132
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=53.59 E-value=38 Score=25.12 Aligned_cols=33 Identities=15% Similarity=0.302 Sum_probs=25.5
Q ss_pred hhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhc
Q psy11573 11 LADLQPVQQLSHFRFLFRLFSEMVEAMKKVASL 43 (248)
Q Consensus 11 ~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~ 43 (248)
+...+.+..++......|+|++++.+..+++..
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~ 40 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTR 40 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344556677888888889999999998887754
No 133
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=53.29 E-value=39 Score=25.27 Aligned_cols=46 Identities=9% Similarity=0.014 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+| ....+.+..++. +|+.++|+...++++.
T Consensus 98 ~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 143 (177)
T 2e2e_A 98 AQTRAMIDKALAL-----DSNEI---TALMLLASDAFM-QANYAQAIELWQKVMD 143 (177)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH-cccHHHHHHHHHHHHh
Confidence 4678888888865 34443 445566666665 7999999887776654
No 134
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=52.64 E-value=36 Score=26.76 Aligned_cols=33 Identities=9% Similarity=0.101 Sum_probs=27.6
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
++.+.+++......|+|++++.++.+++..+|+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 36 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID 36 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 455678888888999999999999999987653
No 135
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=52.61 E-value=68 Score=23.71 Aligned_cols=62 Identities=8% Similarity=0.045 Sum_probs=42.5
Q ss_pred hhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 12 ADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 12 ~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
...+.+..++....+.++|++++.++.++++.+|. +..=...+..+|-. .+....|...+..
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 70 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSA-SGQHEKAAEDAEL 70 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHH-ccCHHHHHHHHHH
Confidence 34455667788888889999999999988888765 35555566666654 4555666665543
No 136
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=52.15 E-value=27 Score=30.22 Aligned_cols=53 Identities=21% Similarity=0.259 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHhhcC-------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTEL-------PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L-------~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
+.|...|++|+.+....- ...+|.+..+.+|.+..|+. +|+.++|+...++|+
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al 223 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK-LQAFSAAIESCNKAL 223 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 568888888887642110 00124445666777776666 688888877776664
No 137
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=52.07 E-value=40 Score=25.78 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+| ....|.+..++. +|+.++|+...++++.
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDLAIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 4688899999875 23443 445666666666 7999999998888776
No 138
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=51.72 E-value=39 Score=25.98 Aligned_cols=34 Identities=9% Similarity=0.035 Sum_probs=26.4
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
..+.+..++......++|++++.++++++...|.
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~ 70 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH 70 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc
Confidence 4455667777888889999999999998886544
No 139
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=51.24 E-value=26 Score=25.33 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|..+|++|+++ .|.+| ....+.++.+.. +|+.++|+...++++.
T Consensus 68 ~~A~~~~~~al~l-----~P~~~---~~~~~la~~~~~-~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 68 GLAIIALNHARML-----DPKDI---AVHAALAVSHTN-EHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 5789999999865 45554 344556665555 6899998887776653
No 140
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=49.60 E-value=29 Score=28.00 Aligned_cols=32 Identities=3% Similarity=0.076 Sum_probs=26.5
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
.+..+.......|+|++++.+..++++.+|+.
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~ 44 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTM 44 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCC
Confidence 34567777888899999999999999988774
No 141
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=49.38 E-value=93 Score=24.34 Aligned_cols=56 Identities=13% Similarity=0.004 Sum_probs=33.8
Q ss_pred HHhhHHHHhcCHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 19 QLSHFRFLFRLFSEMVEAMKKVASLDVEL---TVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 19 ~~a~laeqaeRydDmv~~mK~li~~~~eL---s~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
.+++.....++|++++..++++++..+.- +.+-...+..+|.. .+....|...+..
T Consensus 10 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (275)
T 1xnf_A 10 VLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDS-LGLRALARNDFSQ 68 (275)
T ss_dssp GSCCCCCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred ceeeccCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 45555666789999999999999874322 22333444555443 3445555555543
No 142
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=49.04 E-value=36 Score=25.86 Aligned_cols=49 Identities=14% Similarity=0.264 Sum_probs=36.4
Q ss_pred cCHHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHhhhhh----------------hhHHHHHHHHH
Q psy11573 28 RLFSEMVEAMKKVASLD-VELTVEERNLLSVAYKNVIGA----------------RRASWRIISSI 76 (248)
Q Consensus 28 eRydDmv~~mK~li~~~-~eLs~EERnLLSvAYKn~i~~----------------~R~s~R~l~~i 76 (248)
++|+.++..++.+-..+ ..++.+++-.|-.-||..+.. +..||..+..+
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gm 75 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKM 75 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCC
Confidence 56889999998875433 368999999999999988532 56777776443
No 143
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=48.80 E-value=54 Score=23.66 Aligned_cols=31 Identities=13% Similarity=-0.023 Sum_probs=25.2
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
-+..++......|+|++++..+++++...|.
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 40 (186)
T 3as5_A 10 YYRDKGISHAKAGRYSQAVMLLEQVYDADAF 40 (186)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTCCTTSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc
Confidence 3456777888899999999999998887664
No 144
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=48.08 E-value=27 Score=31.74 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhhcCCC--------CCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPP--------THPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~p--------t~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+... .+. .+|.+..+.+|.+..|+. +++.++|+...++|+.
T Consensus 285 ~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLK-LREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHh
Confidence 4688899999876532 110 134556777788877776 7888888887777643
No 145
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=47.96 E-value=25 Score=31.99 Aligned_cols=53 Identities=9% Similarity=0.009 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHhh
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 199 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai~~l 199 (248)
.+.|...|++|+.. +| ...+-+.|.-|..+..|+.+.|.+.+.++|+.|+..+
T Consensus 62 ~~~a~~~~~ral~~--------~p-~~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~ 114 (530)
T 2ooe_A 62 YDKVEKLFQRCLMK--------VL-HIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI 114 (530)
T ss_dssp HHHHHHHHHHHTTT--------CC-CHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc--------CC-ChHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC
Confidence 45788888888743 23 3457888888999999999999999999999998754
No 146
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=47.87 E-value=1.3e+02 Score=25.60 Aligned_cols=54 Identities=7% Similarity=0.183 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
.+.|...|++|++++...- +|.......|.+..++. +|+.++|+...++|+.-+
T Consensus 238 ~~~A~~~~~~al~~~~~~~---~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 238 DQMAVEHFQKAAKVSREKV---PDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhC---ChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Confidence 4679999999999987543 45444444555555555 899999998877776543
No 147
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=47.17 E-value=38 Score=31.17 Aligned_cols=15 Identities=20% Similarity=0.029 Sum_probs=7.5
Q ss_pred hCChHHHHHHHHHHH
Q psy11573 178 LNSPDRACRLAKAAF 192 (248)
Q Consensus 178 l~~~~~A~~iAk~af 192 (248)
+|+.++|+...++|+
T Consensus 87 ~g~~~eA~~~~~~al 101 (477)
T 1wao_1 87 LGKFRAALRDYETVV 101 (477)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 455555555444443
No 148
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=46.88 E-value=1.7e+02 Score=27.99 Aligned_cols=45 Identities=7% Similarity=-0.244 Sum_probs=32.6
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYK 60 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYK 60 (248)
+.+..++....+.|+|++++..+.++++.+|.- .+=...+..+|-
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~ 478 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWR-WRLVWYRAVAEL 478 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch-HHHHHHHHHHHH
Confidence 345567777888899999999999999887663 444555555544
No 149
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=46.78 E-value=31 Score=28.91 Aligned_cols=41 Identities=10% Similarity=0.135 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRL 187 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~i 187 (248)
+.|...|++|+. ++|.+|.. +-++++.|+.. .|+.++|+.+
T Consensus 116 ~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~-~~~~~~A~~~ 156 (308)
T 2ond_A 116 EKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARR-AEGIKSGRMI 156 (308)
T ss_dssp HHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHH-HHCHHHHHHH
T ss_pred HHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHH-hcCHHHHHHH
Confidence 345555555542 34444421 33444444433 3444444433
No 150
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=46.63 E-value=42 Score=22.48 Aligned_cols=34 Identities=12% Similarity=0.179 Sum_probs=27.6
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
.+.+..++......|+|++++.++.+++..+|.-
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 37 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQN 37 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 3445677778888999999999999999987753
No 151
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=46.55 E-value=74 Score=22.39 Aligned_cols=53 Identities=13% Similarity=-0.006 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
..|..-|+.|+......-. ..+.+-.+..++++-+| .+|+.++|+...++|+.
T Consensus 22 ~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 22 YHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHh
Confidence 3578888898877643211 12233344455554444 58999999998888765
No 152
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=46.38 E-value=60 Score=21.29 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=14.9
Q ss_pred HHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 19 QLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 19 ~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
.++.+....++|++++.+++++++.+|.
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 38 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFEKAIQLDPE 38 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCcC
Confidence 3444445555566666555555555443
No 153
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=45.86 E-value=40 Score=25.15 Aligned_cols=29 Identities=0% Similarity=-0.026 Sum_probs=25.3
Q ss_pred HHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 19 QLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 19 ~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
.++.+..+.|+|++++.+++++++.+|.-
T Consensus 36 ~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 36 YFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 56788888999999999999999988763
No 154
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=45.47 E-value=92 Score=23.17 Aligned_cols=56 Identities=11% Similarity=-0.138 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
.+.|...|++|+.++.. . .+|...+.+++.-...|.-.|++++|+...++|++-+-
T Consensus 123 ~~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 123 LAGARQEYEKSLVYAQQ-A--DDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-c--cchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 35789999999998764 2 24555555555555555568999999988887777653
No 155
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=44.95 E-value=1e+02 Score=24.11 Aligned_cols=47 Identities=23% Similarity=0.129 Sum_probs=38.6
Q ss_pred cCHHHHHHHHHHHh---hcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 28 RLFSEMVEAMKKVA---SLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 28 eRydDmv~~mK~li---~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
+|.|..++++|.-+ -.+.+||.|-|.=|..-.|...-.-|-|.|-+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIR 60 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIA 60 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57788888887655 359999999999999988988888888888773
No 156
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=44.37 E-value=65 Score=23.99 Aligned_cols=46 Identities=9% Similarity=-0.018 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+ .|.+|.. ..+.+..++. +|+.++|+...++|+.
T Consensus 38 ~~A~~~~~~al~~-----~p~~~~~---~~~lg~~~~~-~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCVL-----DHYDSRF---FLGLGACRQA-MGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHH-----CTTCHHH---HHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-----CcccHHH---HHHHHHHHHH-HhhHHHHHHHHHHHHh
Confidence 4677778877653 4556533 3455555554 7999999988887754
No 157
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=44.22 E-value=36 Score=28.45 Aligned_cols=50 Identities=18% Similarity=0.016 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhh--cCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHH
Q psy11573 143 VAYKSASDIAMT--ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 196 (248)
Q Consensus 143 ~aY~~A~~~a~~--~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ai 196 (248)
.-|++|...... .+.|.++ ....+.+..|+. +|+.++|+...++++.-.-
T Consensus 52 ~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 52 QQPEQALADCRRALELDGQSV---KAHFFLGQCQLE-MESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHTTSCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCc
Confidence 345566655543 3444443 444555555444 7888888888888776543
No 158
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=43.73 E-value=90 Score=22.56 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=16.9
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
+..++....+.|+|++++.++++++..+|.
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p~ 50 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCMLDHY 50 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhCCc
Confidence 344555555556666666666666655443
No 159
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=43.70 E-value=72 Score=22.83 Aligned_cols=47 Identities=11% Similarity=0.003 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.+.|...|++|+.+ .|.|| ..-.+.+..+.. +|+.++|+...++|+.
T Consensus 33 ~~~A~~~~~~al~~-----~P~~~---~a~~~lg~~~~~-~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 33 LAEAALAFEAVCQK-----EPERE---EAWRSLGLTQAE-NEKDGLAIIALNHARM 79 (121)
T ss_dssp HHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 35678888888754 34444 334455555554 7999999887766654
No 160
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=42.55 E-value=83 Score=21.87 Aligned_cols=24 Identities=13% Similarity=0.192 Sum_probs=10.8
Q ss_pred HHhhHHHHhcCHHHHHHHHHHHhh
Q psy11573 19 QLSHFRFLFRLFSEMVEAMKKVAS 42 (248)
Q Consensus 19 ~~a~laeqaeRydDmv~~mK~li~ 42 (248)
.++......|+|++++.++++++.
T Consensus 14 ~~g~~~~~~~~~~~A~~~~~~al~ 37 (137)
T 3q49_B 14 EQGNRLFVGRKYPEAAACYGRAIT 37 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHh
Confidence 334444444444444444444444
No 161
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=42.50 E-value=50 Score=21.95 Aligned_cols=43 Identities=12% Similarity=0.019 Sum_probs=30.3
Q ss_pred HHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHH
Q psy11573 18 QQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYK 60 (248)
Q Consensus 18 ~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYK 60 (248)
..++......|+|++++.+++++++.+|.-...=...+..+|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~ 46 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYR 46 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH
Confidence 4677778889999999999999999877642213344444443
No 162
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=42.36 E-value=1.8e+02 Score=25.77 Aligned_cols=55 Identities=5% Similarity=-0.053 Sum_probs=36.6
Q ss_pred HHHhhHHHHhcC-HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 18 QQLSHFRFLFRL-FSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 18 ~~~a~laeqaeR-ydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
..++.+....|+ |++++.++.++++.+|.. ..=.+.+..+|... +....+...+.
T Consensus 135 ~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~-~~a~~~~g~~~~~~-g~~~eAl~~~~ 190 (382)
T 2h6f_A 135 HFRRVLLKSLQKDLHEEMNYITAIIEEQPKN-YQVWHHRRVLVEWL-RDPSQELEFIA 190 (382)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH-TCCTTHHHHHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHc-cCHHHHHHHHH
Confidence 355666677898 999999999999998873 44455555555443 44444544443
No 163
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=42.00 E-value=60 Score=25.25 Aligned_cols=46 Identities=7% Similarity=-0.029 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+. +. |-......+.+..|+. +|+.++|+...++++.
T Consensus 59 ~~A~~~~~~al~-----~~---p~~~~~~~~l~~~~~~-~~~~~~A~~~~~~al~ 104 (228)
T 4i17_A 59 KEAADYFDIAIK-----KN---YNLANAYIGKSAAYRD-MKNNQEYIATLTEGIK 104 (228)
T ss_dssp HHHHHHHHHHHH-----TT---CSHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hC---cchHHHHHHHHHHHHH-cccHHHHHHHHHHHHH
Confidence 468888888874 33 3344455566666555 7999999988877765
No 164
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=40.98 E-value=1.3e+02 Score=23.48 Aligned_cols=28 Identities=11% Similarity=-0.106 Sum_probs=23.1
Q ss_pred HhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 20 LSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 20 ~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
++.+....|+|++++.+++++++.+|.-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 6666777899999999999999887763
No 165
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=40.89 E-value=1.3e+02 Score=23.60 Aligned_cols=44 Identities=7% Similarity=-0.097 Sum_probs=31.6
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCH--HHHHHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTV--EERNLLSVAYK 60 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~--EERnLLSvAYK 60 (248)
+..++......|+|++++..++++++..|.-.. +-.-.+..+|-
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 345677778889999999999999998877543 23344555553
No 166
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=40.71 E-value=57 Score=27.52 Aligned_cols=52 Identities=17% Similarity=-0.027 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 140 NSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 140 ~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
.|...+++|+.. .|+.+|...+.+++.--..|-..|+.++|....+++..-+
T Consensus 32 ~A~~~~~~al~~----~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 83 (373)
T 1hz4_A 32 EAERLAKLALEE----LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMA 83 (373)
T ss_dssp HHHHHHHHHHHT----CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 456666666543 2444444344444443334444677777777666665543
No 167
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=40.40 E-value=54 Score=24.97 Aligned_cols=53 Identities=11% Similarity=-0.033 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhhcC--------CCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTEL--------PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L--------~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
+.|...|++|+++...+- ...+|.......|.+..++. +|+.++|+...++++
T Consensus 88 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 88 DLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK-KEEWKKAEEQLALAT 148 (213)
T ss_dssp HHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 568889999886532100 00334444566777776666 799999987766654
No 168
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=39.18 E-value=1e+02 Score=22.01 Aligned_cols=31 Identities=6% Similarity=-0.086 Sum_probs=25.1
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
-+..++.+....|+|++++.+++++++..|.
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 74 (186)
T 3as5_A 44 VALHLGIAYVKTGAVDRGTELLERSLADAPD 74 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 3456677778889999999999999987654
No 169
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=37.72 E-value=1.5e+02 Score=23.56 Aligned_cols=43 Identities=14% Similarity=0.007 Sum_probs=30.0
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAY 59 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAY 59 (248)
.+..++.+....|+|++++.+++++++.+|.. .+-...+..+|
T Consensus 57 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~ 99 (327)
T 3cv0_A 57 AWRSLGLTQAENEKDGLAIIALNHARMLDPKD-IAVHAALAVSH 99 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC-HHHHHHHHHHH
Confidence 34466777888899999999999999887653 33333334443
No 170
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=37.63 E-value=67 Score=24.20 Aligned_cols=31 Identities=10% Similarity=-0.008 Sum_probs=20.9
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCC
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVEL 47 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eL 47 (248)
+..++.+..+.|+|++++.++.+++..+|..
T Consensus 111 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 111 ACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 3445556666777777777777777776654
No 171
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=37.13 E-value=1.9e+02 Score=24.31 Aligned_cols=45 Identities=27% Similarity=0.429 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 140 NSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 140 ~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
.|...|++|+.+ .|.+|. ...|.+..++. .|+.++|+...++++.
T Consensus 221 ~A~~~~~~al~~-----~p~~~~---~~~~l~~~~~~-~g~~~~A~~~~~~al~ 265 (388)
T 1w3b_A 221 RAVAAYLRALSL-----SPNHAV---VHGNLACVYYE-QGLIDLAIDTYRRAIE 265 (388)
T ss_dssp HHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-----CcCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHh
Confidence 445555555432 344432 22333433333 6888888877666654
No 172
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=36.92 E-value=1.9e+02 Score=24.50 Aligned_cols=55 Identities=18% Similarity=0.057 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 195 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~a 195 (248)
-+.|...|++++..... ...+|..+...++-+-.|+. +|+.++|..+.++|..-+
T Consensus 151 ~~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 151 YKDSLALINDLLREFKK--LDDKPSLVDVHLLESKVYHK-LRNLAKSKASLTAARTAA 205 (434)
T ss_dssp HHHHHHHHHHHHHHHTT--SSCSTHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHh
Confidence 35688888888877643 33467777777777766666 799999998877776543
No 173
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=36.17 E-value=1.9e+02 Score=24.21 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHHH
Q psy11573 138 AENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194 (248)
Q Consensus 138 ~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd~ 194 (248)
.+.|...|++|++ +.|.+|. ...|.+..+. ..|+.++|+...++++..
T Consensus 253 ~~~A~~~~~~al~-----~~p~~~~---~~~~l~~~~~-~~g~~~~A~~~~~~al~~ 300 (388)
T 1w3b_A 253 IDLAIDTYRRAIE-----LQPHFPD---AYCNLANALK-EKGSVAEAEDCYNTALRL 300 (388)
T ss_dssp HHHHHHHHHHHHH-----TCSSCHH---HHHHHHHHHH-HHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHH-HcCCHHHHHHHHHHHHhh
Confidence 3567777777764 4555553 3445555444 479999999988887754
No 174
>1m1e_B ICAT; cell adhesion, cytoskeleton, armadillo repeats, transciption factor, structural protein; 2.10A {Homo sapiens} SCOP: a.161.1.1 PDB: 1luj_B 1t08_B
Probab=35.91 E-value=43 Score=24.46 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=17.2
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHH
Q psy11573 34 VEAMKKVASLDVELTVEERNLLSV 57 (248)
Q Consensus 34 v~~mK~li~~~~eLs~EERnLLSv 57 (248)
++.+-.+-+++..||+||..+|+.
T Consensus 20 vEILtALkKLGe~Ls~eE~~FL~~ 43 (81)
T 1m1e_B 20 VRVLLMLRKMGSNLTASEEEFLRT 43 (81)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCHHHHHHHHH
Confidence 333333445799999999999974
No 175
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=33.92 E-value=91 Score=19.81 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=40.5
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSI 76 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~i 76 (248)
+..++......++|++++.++++++..+|.- .+=...+..+|.. .+....|...+...
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~a 69 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 4466777888899999999999999887653 4444556666644 45556666666543
No 176
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=33.09 E-value=1.2e+02 Score=22.28 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCCh--HHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSP--DRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~--~~A~~iAk~afd 193 (248)
+.|..+|++|+.+. |.+| ....+.+..+|...|+. ++|+...++++.
T Consensus 61 ~~A~~~~~~al~~~-----p~~~---~~~~~la~~l~~~~~~~~~~~A~~~~~~al~ 109 (177)
T 2e2e_A 61 SNSLLAYRQALQLR-----GENA---ELYAALATVLYYQASQHMTAQTRAMIDKALA 109 (177)
T ss_dssp HHHHHHHHHHHHHH-----CSCH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCCH---HHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 57899999998764 3443 34556666656557887 999888777765
No 177
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=32.80 E-value=2.1e+02 Score=23.75 Aligned_cols=52 Identities=4% Similarity=-0.011 Sum_probs=30.0
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
+..++.+..+.|+|++++..+.+ +-+.+=...+..+|-. .+..-.|...+..
T Consensus 104 ~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~-~g~~~~A~~~l~~ 155 (291)
T 3mkr_A 104 LLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLK-LDRLDLARKELKK 155 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 45666777777888888877765 3344545555554432 3444455555443
No 178
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=31.94 E-value=1.3e+02 Score=23.27 Aligned_cols=52 Identities=15% Similarity=0.050 Sum_probs=32.3
Q ss_pred hhhhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHhhh
Q psy11573 9 GYLADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDV-ELTVEERNLLSVAYKNVI 63 (248)
Q Consensus 9 ~~~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~-eLs~EERnLLSvAYKn~i 63 (248)
||=-.-++|.+-. +.-++|+.++.+++.+-..++ .++.+++-.|=.-||..+
T Consensus 10 ~~~~~~~~~~~~~---dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT 62 (119)
T 3flv_A 10 GVDLGTENLYFQS---MHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQAT 62 (119)
T ss_dssp ------------C---HHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhh---HHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHh
Confidence 4433345554433 344679999999999877554 689999999998999876
No 179
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=31.94 E-value=1e+02 Score=24.70 Aligned_cols=23 Identities=13% Similarity=-0.080 Sum_probs=17.8
Q ss_pred cCchhHHHHHHHHHHHHHHHHHH
Q psy11573 129 ATGTERKEAAENSLVAYKSASDI 151 (248)
Q Consensus 129 ~~~~~~~~~~e~A~~aY~~A~~~ 151 (248)
..+.+|...-+.|..+|+.|+++
T Consensus 9 ~~~~~r~~~feeA~~~~~~Ai~l 31 (158)
T 1zu2_A 9 ETEFDRILLFEQIRQDAENTYKS 31 (158)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHhHHHHHHHHHHHHHHH
Confidence 35667777888899999988864
No 180
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=31.63 E-value=1.2e+02 Score=20.49 Aligned_cols=36 Identities=6% Similarity=-0.065 Sum_probs=29.5
Q ss_pred hhhhchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 11 LADLQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 11 ~~~~~~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
-.....+..++......++|++++.++++++..+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 48 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK 48 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 344555667888888999999999999999988665
No 181
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=31.31 E-value=75 Score=29.10 Aligned_cols=30 Identities=7% Similarity=0.135 Sum_probs=23.3
Q ss_pred hHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 17 VQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 17 ~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
+..++....+.|+|++++.+++++++.+|.
T Consensus 9 ~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~ 38 (477)
T 1wao_1 9 LKTQANDYFKAKDYENAIKFYSQAIELNPS 38 (477)
T ss_dssp SSSSSSSTTTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhCCc
Confidence 445566777789999999999998887655
No 182
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=31.03 E-value=1.6e+02 Score=21.88 Aligned_cols=60 Identities=0% Similarity=-0.115 Sum_probs=42.0
Q ss_pred hchhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy11573 14 LQPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISS 75 (248)
Q Consensus 14 ~~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~~ 75 (248)
++.+..++....+.|+|++++..++++++.+|.- .+=...+..+|-. .+....+...+..
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~la~~~~~-~g~~~~A~~~~~~ 65 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDELQSR-GDVKLAKADCLLE-TKQFELAQELLAT 65 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTS-HHHHHHHHHHHHH-TTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 4567788888889999999999999998876663 4445556666543 4455555555543
No 183
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=29.80 E-value=60 Score=29.13 Aligned_cols=47 Identities=11% Similarity=0.064 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcch-HHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIR-LGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pir-LgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
++|...|++|+++. |-. +..-..|+-|+..-.++++.|....++|+.
T Consensus 221 ekA~~~ferAL~Ln--------P~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~ 268 (301)
T 3u64_A 221 EKAHTAFEHLTRYC--------SAHDPDHHITYADALCIPLNNRAGFDEALDRALA 268 (301)
T ss_dssp HHHHHHHHHHHHHC--------CTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--------CCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHc
Confidence 57899999999873 543 666677788877777899988887777665
No 184
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=29.49 E-value=1.5e+02 Score=21.30 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=28.6
Q ss_pred cCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhh
Q psy11573 28 RLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVI 63 (248)
Q Consensus 28 eRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i 63 (248)
++|+.++.+++.+-. ...++.+++-.|-.-||..+
T Consensus 4 ~~F~~A~~~v~~l~~-~~~~~~~~~L~LYalyKQAt 38 (89)
T 1hbk_A 4 QVFEECVSFINGLPR-TINLPNELKLDLYKYYKQST 38 (89)
T ss_dssp HHHHHHHHHHHHSCT-TCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-cCCCCHHHHHHHHHHHHHhh
Confidence 468889999887643 46899999999999999875
No 185
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=28.69 E-value=1.9e+02 Score=21.96 Aligned_cols=57 Identities=16% Similarity=0.103 Sum_probs=39.3
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIIS 74 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i~~~R~s~R~l~ 74 (248)
+.+..++......|+|++++.++.++++.+ -+..=...+..+|-. .+....|...+.
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 62 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTLN 62 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 456678888889999999999999999887 444555555555543 334444444443
No 186
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=28.58 E-value=80 Score=23.49 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=29.7
Q ss_pred hcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhhh
Q psy11573 27 FRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKNVI 63 (248)
Q Consensus 27 aeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn~i 63 (248)
+.+|+.+++.++.+.. ..++.+++-.|-.-||..+
T Consensus 11 ~~~F~~A~~~vk~l~~--~~ps~~~~L~LYaLyKQAt 45 (96)
T 2lbb_A 11 ADDFDAAVKYVSNTTT--MMASNDDKLCFYKYYKQAT 45 (96)
T ss_dssp SSTHHHHHHHHHHCCC--SCCCTTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCC--CCCCHHHHHHHHHHHHHHh
Confidence 5789999999988643 6889999999999999875
No 187
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=28.45 E-value=1e+02 Score=26.50 Aligned_cols=49 Identities=16% Similarity=0.168 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCc--------------chHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHP--------------IRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~p--------------irLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|+.+. |.++ ++..+.+|.+..|+. +++.++|+...++|+.
T Consensus 196 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~-~g~~~~A~~~~~~al~ 258 (338)
T 2if4_A 196 EEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIK-LKRYDEAIGHCNIVLT 258 (338)
T ss_dssp HHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHT-TTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 46888899888653 2222 122366788877765 7999999998888764
No 188
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=27.31 E-value=1.9e+02 Score=27.99 Aligned_cols=53 Identities=17% Similarity=0.011 Sum_probs=35.5
Q ss_pred hhccCchhHHHHHHHHHHHHHHHHHHHhhcCC-CCCcchHHHhhhHHHHHHHHhCC
Q psy11573 126 AEFATGTERKEAAENSLVAYKSASDIAMTELP-PTHPIRLGLALNFSVFYYEILNS 180 (248)
Q Consensus 126 AE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~-pt~pirLgLaLN~SVF~yEil~~ 180 (248)
||....+.-.+.+++|.++|++|++..++ +. .-+|--.-..||- +-.||..||
T Consensus 436 ~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k-~~~tdd~~~v~~~~~~-ak~yE~aGD 489 (526)
T 2wb7_A 436 AKGMNNENAIEYAQGAIDEYKAAINDLQK-AAQQDDYQMFLNYLNA-AKKHEMAGD 489 (526)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHH-HTTCCSHHHHHHHHHH-HHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHH-hhhhhhccH
Confidence 66666777778899999999999999975 55 4444333344443 334665543
No 189
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=26.70 E-value=21 Score=26.55 Aligned_cols=40 Identities=23% Similarity=0.389 Sum_probs=34.1
Q ss_pred hhHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHh
Q psy11573 21 SHFRFLFRLFSEMVEAMKKVASLDVELTVEERNLLSVAYKN 61 (248)
Q Consensus 21 a~laeqaeRydDmv~~mK~li~~~~eLs~EERnLLSvAYKn 61 (248)
.-|...++.+||++..+.++ .....|+.++..-|.|+.|=
T Consensus 18 ~~l~Fe~~nhDDi~~Ive~~-~~~~~~~~~~a~af~vGLKL 57 (88)
T 3cjl_A 18 RTLSFEFSLHDDLFKLLEKV-DGKMDMTPEQTQAFMVGLKL 57 (88)
T ss_dssp CEEEEEEEESSCHHHHHHHH-TTTSSSCHHHHHHHHHHHHH
T ss_pred CCeEEeccChHHHHHHHHHh-hccCCCCHHHHHHHHHHHHH
Confidence 34667789999999999887 77889999999999998874
No 190
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=26.22 E-value=3.2e+02 Score=26.32 Aligned_cols=81 Identities=16% Similarity=0.218 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHhhhhhhhHHHHHHHHHhhhhhhhchhHHH----HHHHHHHHHhhhh--------hHhhh---hhHH
Q psy11573 47 LTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKL----EMIRQYRTQVRPP--------CIRIL---AHNV 111 (248)
Q Consensus 47 Ls~EERnLLSvAYKn~i~~~R~s~R~l~~ieqke~~~~~~~~~----~~i~~yr~kIe~E--------C~eii---~esk 111 (248)
+|.+|++.+-....-.|++.-...-.-.....+-+..+|+.-+ +.|+.|.+-|+-- -++++ .-++
T Consensus 403 i~ese~~~ik~i~~s~i~sL~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak 482 (526)
T 2wb7_A 403 YKKKDREKINATTKAMINSLQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAK 482 (526)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHH
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhh
Confidence 5666776665555555554333322211122222223443332 4556666555433 44454 3344
Q ss_pred HHHHHhhcccccchhhcc
Q psy11573 112 YFRNTLKGDYHRYLAEFA 129 (248)
Q Consensus 112 vFy~KmKGDyyRYlAE~~ 129 (248)
. +-|-||||.=-|+-.
T Consensus 483 ~--yE~aGDyy~~AA~k~ 498 (526)
T 2wb7_A 483 K--HEMAGDYYVNAARKA 498 (526)
T ss_dssp H--HHHHHHHHHHHHHHH
T ss_pred h--hhhccHHHHHHHHHH
Confidence 4 789999999888744
No 191
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=25.81 E-value=86 Score=26.05 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=26.0
Q ss_pred chhHHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 15 QPVQQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 15 ~~~~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
+.+..++......|+|++++.++.+++..+|.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 36 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAITRNPL 36 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc
Confidence 34556777888899999999999999887664
No 192
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=25.39 E-value=1.5e+02 Score=21.26 Aligned_cols=27 Identities=4% Similarity=-0.156 Sum_probs=22.4
Q ss_pred hhHHHhhHHHHhcCHHHHHHHHHHHhh
Q psy11573 16 PVQQLSHFRFLFRLFSEMVEAMKKVAS 42 (248)
Q Consensus 16 ~~~~~a~laeqaeRydDmv~~mK~li~ 42 (248)
.|+.+|--.+.+|+|++++.+.+..++
T Consensus 18 ~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 18 TVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 356777777899999999999988876
No 193
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=25.06 E-value=1.5e+02 Score=19.56 Aligned_cols=29 Identities=21% Similarity=0.229 Sum_probs=23.3
Q ss_pred HHHhhHHHHhcCHHHHHHHHHHHhhcCCC
Q psy11573 18 QQLSHFRFLFRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 18 ~~~a~laeqaeRydDmv~~mK~li~~~~e 46 (248)
..++......|+|++++..+++++..+|.
T Consensus 5 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 33 (136)
T 2fo7_A 5 YNLGNAYYKQGDYDEAIEYYQKALELDPR 33 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHcCCc
Confidence 34566777889999999999999887654
No 194
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=24.03 E-value=2.7e+02 Score=24.96 Aligned_cols=45 Identities=7% Similarity=-0.076 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
+.|...|++|+++ .|.++ ...+|.+..|+. +++.++|+...++|+
T Consensus 334 ~~A~~~~~~al~~-----~p~~~---~a~~~~g~a~~~-~g~~~~A~~~~~~al 378 (457)
T 1kt0_A 334 TKAVECCDKALGL-----DSANE---KGLYRRGEAQLL-MNEFESAKGDFEKVL 378 (457)
T ss_dssp HHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCccH---HHHHHHHHHHHH-ccCHHHHHHHHHHHH
Confidence 4688888888865 23343 334555555555 799998877666554
No 195
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=23.55 E-value=2.3e+02 Score=24.85 Aligned_cols=46 Identities=15% Similarity=0.107 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHhhhHHHHHHHHhCChHHHHHHHHHHHH
Q psy11573 139 ENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 193 (248)
Q Consensus 139 e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~SVF~yEil~~~~~A~~iAk~afd 193 (248)
+.|...|++|++ +.|.+| ....+.+..|+. +++.++|+...++|+.
T Consensus 290 ~~A~~~~~~al~-----~~p~~~---~a~~~lg~~~~~-~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 290 QGAVDSCLEALE-----IDPSNT---KALYRRAQGWQG-LKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHT-----TCTTCH---HHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----hCchhH---HHHHHHHHHHHH-ccCHHHHHHHHHHHHH
Confidence 467888888875 345554 333455555544 8999999887776654
No 196
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=23.40 E-value=26 Score=33.41 Aligned_cols=47 Identities=21% Similarity=0.362 Sum_probs=30.5
Q ss_pred hcccccchhhccCchhHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHhhhH------HHHHHH
Q psy11573 118 KGDYHRYLAEFATGTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNF------SVFYYE 176 (248)
Q Consensus 118 KGDyyRYlAE~~~~~~~~~~~e~A~~aY~~A~~~a~~~L~pt~pirLgLaLN~------SVF~yE 176 (248)
-||..||...+ ..|...|.+|..+.=.. ...-..||+.-.+ +||||-
T Consensus 158 LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~--G~~~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 158 LGDIARYRNQT----------SQAESYYRHAAQLVPSN--GQPYNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHTTCH----------HHHHHHHHHHHHHCTTB--SHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHH----------HHHHHHHHHHHHhCCCC--CchHHHHHHHHhcccccHHHHHHHH
Confidence 69999999764 57999999998763111 1112456655444 577663
No 197
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=22.78 E-value=1.7e+02 Score=26.72 Aligned_cols=20 Identities=0% Similarity=-0.190 Sum_probs=0.5
Q ss_pred hcCHHHHHHHHHHHhhcCCC
Q psy11573 27 FRLFSEMVEAMKKVASLDVE 46 (248)
Q Consensus 27 aeRydDmv~~mK~li~~~~e 46 (248)
+|.+++++.+++++++.+|.
T Consensus 2 ~g~~~~A~~~~~~al~~~p~ 21 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQ 21 (568)
T ss_dssp -------------------C
T ss_pred CccHHHHHHHHHHHHHhCCC
Confidence 47788999999998887665
No 198
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=21.55 E-value=1.6e+02 Score=20.71 Aligned_cols=30 Identities=10% Similarity=-0.210 Sum_probs=23.5
Q ss_pred hhchhHHHhhHHHHhcCHHHHHHHHHHHhh
Q psy11573 13 DLQPVQQLSHFRFLFRLFSEMVEAMKKVAS 42 (248)
Q Consensus 13 ~~~~~~~~a~laeqaeRydDmv~~mK~li~ 42 (248)
.--.++.+|--.+.+|+|++++.+.+..++
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 333566777778889999999998888776
No 199
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=21.24 E-value=1.2e+02 Score=24.82 Aligned_cols=51 Identities=22% Similarity=0.299 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCC----CcchHHHhhhHHHHHHHHhCChHHHHHHHHHHH
Q psy11573 136 EAAENSLVAYKSASDIAMTELPPT----HPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192 (248)
Q Consensus 136 ~~~e~A~~aY~~A~~~a~~~L~pt----~pirLgLaLN~SVF~yEil~~~~~A~~iAk~af 192 (248)
...++-.+.|++|.. .+||+ ..-+.-|=++|+.| .++ +|+++|.++=+.|.
T Consensus 33 ~~l~rlrd~YerAia----~~Pp~k~~~wrrYI~LWIrYA~~-~ei-~D~d~aR~vy~~a~ 87 (161)
T 4h7y_A 33 ALLNKLIGRYSQAIE----ALPPDKYGQNESFARIQVRFAEL-KAI-QEPDDARDYFQMAR 87 (161)
T ss_dssp HHHHHHHHHHHHHHH----HSCGGGGTTCHHHHHHHHHHHHH-HHH-HCGGGCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH----cCCccccccHHHHHHHHHHHHHH-HHh-cCHHHHHHHHHHHH
Confidence 567788899998874 36665 33456688999988 454 99999888777773
No 200
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=20.43 E-value=2.7e+02 Score=21.03 Aligned_cols=32 Identities=6% Similarity=-0.016 Sum_probs=24.9
Q ss_pred hhhhchhHHHhhHHHHhcCHHHHHHHHHHHhh
Q psy11573 11 LADLQPVQQLSHFRFLFRLFSEMVEAMKKVAS 42 (248)
Q Consensus 11 ~~~~~~~~~~a~laeqaeRydDmv~~mK~li~ 42 (248)
|..--.|+.+|--.+.+++|++++.+.+..++
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 44444577788778889999999998888876
Done!