RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11573
(248 letters)
>d1o9da_ a.118.7.1 (A:) 14-3-3-like protein C {Common tobacco
(Nicotiana tabacum) [TaxId: 4097]}
Length = 236
Score = 282 bits (724), Expect = 1e-97
Identities = 149/217 (68%), Positives = 168/217 (77%), Gaps = 19/217 (8%)
Query: 30 FSEMVEAMKKVASL--DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAED 87
+ EMVE M+KV++ ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE++G E+
Sbjct: 20 YEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEE 79
Query: 88 KLEMIRQYRTQVR----PPCIRIL-------------AHNVYFRNTLKGDYHRYLAEFAT 130
+ IR+YR+++ C IL + F +KGDYHRYLAEF T
Sbjct: 80 HVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKT 139
Query: 131 GTERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKA 190
G ERKEAAE++L AYK+A DIA TEL PTHPIRLGLALNFSVFYYEILNSPDRAC LAK
Sbjct: 140 GAERKEAAESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQ 199
Query: 191 AFDDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSD 227
AFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD
Sbjct: 200 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 236
>d2o02a1 a.118.7.1 (A:1-230) zeta isoform {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 277 bits (710), Expect = 2e-95
Identities = 123/214 (57%), Positives = 148/214 (69%), Gaps = 19/214 (8%)
Query: 30 FSEMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKL 89
+ +M MK V EL+ EERNLLSVAYKNV+GARR+SWR++SSIEQK E E K
Sbjct: 19 YDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEGA--EKKQ 76
Query: 90 EMIRQYRTQVRPPCIRIL-----------------AHNVYFRNTLKGDYHRYLAEFATGT 132
+M R+YR ++ I A + F +KGDY+RYLAE A G
Sbjct: 77 QMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGD 136
Query: 133 ERKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 192
++K + S AY+ A +I+ E+ PTHPIRLGLALNFSVFYYEILNSP++AC LAK AF
Sbjct: 137 DKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAF 196
Query: 193 DDAIAELDTLSEDSYKDSTLIMQLLRDNLTLWTS 226
D+AIAELDTLSE+SYKDSTLIMQLLRDNLTLWTS
Sbjct: 197 DEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
>d3efza1 a.118.7.1 (A:46-268) 14-3-3 protein cgd1_2980
{Cryptosporidium parvum [TaxId: 5807]}
Length = 223
Score = 258 bits (660), Expect = 5e-88
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 35 EAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENK--GAEDKLEMI 92
+ +K + LL+ + +N + + R S + I S E+K + + +++I
Sbjct: 2 DVIKVLTESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFIQVI 61
Query: 93 RQYRTQVRPPC-------IRILAHNVY---------FRNTLKGDYHRYLAEFATGTERKE 136
+ IRI+ N+ F LKGD RY AE E+ +
Sbjct: 62 EDIKRDFEESILLESEDVIRIIDDNLLMYSEEGARAFCIKLKGDLMRYKAEILKDEEKNQ 121
Query: 137 AAENSLVAYKSASDIA--MTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 194
+ ++ Y+ A E P+ P+ L LN+++ Y++L +P+ A + A A
Sbjct: 122 CIKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAI-Q 180
Query: 195 AIAELDTLSEDSYKDSTLIMQLLRDNLTLWTSDMQGDG 232
A + SE +++ ++++LRDN++ W G
Sbjct: 181 AAENSRSDSEQFSENTEKLLKILRDNVSQWEQGCSGLL 218
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein
cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]}
Length = 220
Score = 220 bits (562), Expect = 3e-73
Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 26/208 (12%)
Query: 30 FSEMVEAMKKVASL----DVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGA 85
F +M EA+K + L + E EER+LL++ K+ I R + + K+ N
Sbjct: 20 FDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQLNNDE 79
Query: 86 EDKL--EMIRQYRTQVRPPCIRIL----------AHNVYFRNTLKGDYHRYLAEFATGTE 133
K+ E + R ++ + +F+ +K D RY EF
Sbjct: 80 LVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLC-- 137
Query: 134 RKEAAENSLVAYKSASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAA-- 191
+ E+S ++ A + + LG N + E + + +
Sbjct: 138 ---SLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 194
Query: 192 -FDDAIAELDTLSEDSYKDSTLIMQLLR 218
+ I E + + + T+ +Q ++
Sbjct: 195 ILELQIKEQENMDRKA--QITVYLQGIK 220
>d1xo1a2 c.120.1.2 (A:19-185) T5 5'-exonuclease {Bacteriophage T5
[TaxId: 10726]}
Length = 167
Score = 27.3 bits (60), Expect = 1.3
Identities = 18/138 (13%), Positives = 32/138 (23%), Gaps = 20/138 (14%)
Query: 89 LEMIRQYRTQVRPPCIRIL--AHNVYFRNTLKGDYHRYLAEFATGTERKEAAENSLVAYK 146
+ I+ +L FR +Y R E K
Sbjct: 30 VSTIQSLAKSYSARTTIVLGDKGKSVFRLEHLPEYA---------GNRDEKYAQRTEEEK 80
Query: 147 SASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEDS 206
+ + L + F F + + D A + K +
Sbjct: 81 ALDEQFFEYLKDAFEL---CKTTFPTFTIRGVEADDMAAYIVKLIGHL---YDHVWLIST 134
Query: 207 YKDSTLIMQLLRDNLTLW 224
D LL D ++ +
Sbjct: 135 DGD---WDTLLTDKVSRF 149
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 25.5 bits (55), Expect = 4.4
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 69 SWRIISSIEQKEENKGAEDKLEMIRQYRTQVRPPCIRILAHNVYFRNTLKGDYHRYL 125
S + + ++ N D ++++ ++ + P N F L D+ R L
Sbjct: 97 SVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISP--------NFNFMGQLL-DFERTL 144
>d2q80a1 a.128.1.1 (A:6-296) Geranylgeranyl pyrophosphate synthetase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 291
Score = 25.8 bits (55), Expect = 6.0
Identities = 8/45 (17%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 174 YYEILNSPDRACRLAKAAFDDAIAELDTLSEDSYKDSTLIMQLLR 218
Y E + S + K A ++D + + L+ L +
Sbjct: 245 YLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVA-LVKHLSK 288
>d1m1eb_ a.161.1.1 (B:) beta-catenin-interacting protein ICAT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 24.1 bits (52), Expect = 6.4
Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 10/58 (17%)
Query: 32 EMVEAMKKVASLDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGAEDKL 89
++ ++K + LT E L Y V+ +S + ++GAED +
Sbjct: 13 RVLLMLRK---MGSNLTASEEEFLR-TYAGVVN------SQLSQLPPHSIDQGAEDVV 60
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.377
Gapped
Lambda K H
0.267 0.0614 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 885,722
Number of extensions: 38766
Number of successful extensions: 116
Number of sequences better than 10.0: 1
Number of HSP's gapped: 104
Number of HSP's successfully gapped: 9
Length of query: 248
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 165
Effective length of database: 1,268,006
Effective search space: 209220990
Effective search space used: 209220990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.1 bits)