BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11574
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16446|PIPNA_RAT Phosphatidylinositol transfer protein alpha isoform OS=Rattus
norvegicus GN=Pitpna PE=1 SV=2
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 3 IATGASMYQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
+ YQVGQLYSVAEASKNETGGGEG+EVLVNEP++ KGQYT KIYHL
Sbjct: 11 LPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEK-----DDGEKGQYTHKIYHL 65
Query: 63 Q 63
Q
Sbjct: 66 Q 66
>sp|P53810|PIPNA_MOUSE Phosphatidylinositol transfer protein alpha isoform OS=Mus
musculus GN=Pitpna PE=1 SV=2
Length = 271
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 44/61 (72%), Gaps = 5/61 (8%)
Query: 3 IATGASMYQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
+ YQVGQLYSVAEASKNETGGGEG+EVLVNEP++ KGQYT KIYHL
Sbjct: 11 LPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEK-----DDGEKGQYTHKIYHL 65
Query: 63 Q 63
Q
Sbjct: 66 Q 66
>sp|Q00169|PIPNA_HUMAN Phosphatidylinositol transfer protein alpha isoform OS=Homo
sapiens GN=PITPNA PE=1 SV=2
Length = 270
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 3 IATGASMYQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
+ YQVGQLYSVAEASKNETGGGEG+EVLVNEP++ G+ KGQYT KIYHL
Sbjct: 11 LPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEK----DGE--KGQYTHKIYHL 64
Query: 63 Q 63
Q
Sbjct: 65 Q 65
>sp|Q2HJ54|PIPNA_BOVIN Phosphatidylinositol transfer protein alpha isoform OS=Bos taurus
GN=PITPNA PE=1 SV=3
Length = 270
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 3 IATGASMYQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
+ YQVGQLYSVAEASKNETGGGEG+EVLVNEP++ G+ KGQYT KIYHL
Sbjct: 11 LPVSVEEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEK----DGE--KGQYTHKIYHL 64
Query: 63 Q 63
Q
Sbjct: 65 Q 65
>sp|P48738|PIPNA_RABIT Phosphatidylinositol transfer protein alpha isoform
OS=Oryctolagus cuniculus GN=PITPNA PE=3 SV=2
Length = 270
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 6/61 (9%)
Query: 3 IATGASMYQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
+ YQVGQLYSVAEASKNETGGGEG+EVLVNEP++ G+ +GQYT KIYHL
Sbjct: 11 LPVSVDEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYEK----DGE--RGQYTHKIYHL 64
Query: 63 Q 63
Q
Sbjct: 65 Q 65
>sp|P53812|PIPNB_RAT Phosphatidylinositol transfer protein beta isoform OS=Rattus
norvegicus GN=Pitpnb PE=1 SV=2
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHLQ 63
YQVGQLYSVAEASKNETGGGEGIEVL NEP++N G+ KGQYT KIYHL+
Sbjct: 18 YQVGQLYSVAEASKNETGGGEGIEVLKNEPYEN----DGE--KGQYTHKIYHLK 65
>sp|P53811|PIPNB_MOUSE Phosphatidylinositol transfer protein beta isoform OS=Mus
musculus GN=Pitpnb PE=1 SV=2
Length = 271
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 45/54 (83%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHLQ 63
YQVGQLYSVAEASKNETGGGEGIEVL NEP++N G+ KGQYT KIYHL+
Sbjct: 18 YQVGQLYSVAEASKNETGGGEGIEVLKNEPYEN----DGE--KGQYTHKIYHLK 65
>sp|P48739|PIPNB_HUMAN Phosphatidylinositol transfer protein beta isoform OS=Homo
sapiens GN=PITPNB PE=1 SV=2
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHLQ 63
YQVGQLYSVAEASKNETGGGEGIEVL NEP++ G+ KGQYT KIYHL+
Sbjct: 18 YQVGQLYSVAEASKNETGGGEGIEVLKNEPYEK----DGE--KGQYTHKIYHLK 65
>sp|Q5R6F0|PIPNB_PONAB Phosphatidylinositol transfer protein beta isoform OS=Pongo
abelii GN=PITPNB PE=2 SV=3
Length = 272
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHLQ 63
YQVGQLYSVAEASKNETGGGEGIEVL NEP++ G+ KGQYT KIYHL+
Sbjct: 18 YQVGQLYSVAEASKNETGGGEGIEVLKNEPYEK----DGE--KGQYTHKIYHLK 65
>sp|Q9TR36|PIPNB_BOVIN Phosphatidylinositol transfer protein beta isoform OS=Bos taurus
GN=PITPNB PE=1 SV=3
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 44/54 (81%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHLQ 63
YQVGQLYSVAEASKNETGGGEGIEVL NEP++ G+ KGQYT KIYHL+
Sbjct: 18 YQVGQLYSVAEASKNETGGGEGIEVLKNEPYEK----DGE--KGQYTHKIYHLK 65
>sp|Q9NCL8|PITP1_DICDI Phosphatidylinositol transfer protein 1 OS=Dictyostelium
discoideum GN=pitA PE=1 SV=1
Length = 264
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
Y+VGQLYSVA+ S ET GEG+EVLVNEP+ +GQYT KIYHL
Sbjct: 17 YRVGQLYSVAKTSSQETSNGEGVEVLVNEPYKEPE------HEGQYTHKIYHL 63
>sp|Q9NCL7|PITP2_DICDI Phosphatidylinositol transfer protein 2 OS=Dictyostelium
discoideum GN=pitB PE=2 SV=1
Length = 259
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 1 MHIATGASMYQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIY 60
M + YQ+ QLY VA+ SK T GGEGIE++ NEPFDN + KGQYT+KI
Sbjct: 8 MVLPLTVEEYQIAQLYMVAKKSKESTKGGEGIEIIKNEPFDN------EKGKGQYTEKII 61
Query: 61 HLQRS 65
+L S
Sbjct: 62 YLANS 66
>sp|P43125|RDGB_DROME Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB
PE=1 SV=2
Length = 1259
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNET-GGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
Y++ QLY +A+ S+ E+ G G G+E+++NEP+ + P GG GQYTKKIYH+
Sbjct: 17 YRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGP--GG---NGQYTKKIYHV 65
>sp|Q5U2N3|PITM1_RAT Membrane-associated phosphatidylinositol transfer protein 1
OS=Rattus norvegicus GN=Pitpnm1 PE=2 SV=1
Length = 1242
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGG-GEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
YQV QLY + + S+ E+ G G G+E+L N P+ + P GG GQYT K+YH+
Sbjct: 17 YQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGP--GG---NGQYTHKVYHV 65
>sp|O35954|PITM1_MOUSE Membrane-associated phosphatidylinositol transfer protein 1
OS=Mus musculus GN=Pitpnm1 PE=1 SV=1
Length = 1243
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGG-GEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
YQV QLY + + S+ E+ G G G+E+L N P+ + P GG GQYT K+YH+
Sbjct: 17 YQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGP--GG---NGQYTHKVYHV 65
>sp|O00562|PITM1_HUMAN Membrane-associated phosphatidylinositol transfer protein 1
OS=Homo sapiens GN=PITPNM1 PE=1 SV=4
Length = 1244
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNETGG-GEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
YQV QLY + + S+ E+ G G G+E+L N P+ + P GG GQYT K+YH+
Sbjct: 17 YQVAQLYMIQKKSREESSGEGSGVEILANRPYTDGP--GG---SGQYTHKVYHV 65
>sp|Q6ZPQ6|PITM2_MOUSE Membrane-associated phosphatidylinositol transfer protein 2
OS=Mus musculus GN=Pitpnm2 PE=1 SV=2
Length = 1335
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNET-GGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
Y++ QLY + + S+NET G G G+E+L N P+ + P GG GQYT K+YH+
Sbjct: 17 YRIAQLYMIQKKSRNETHGQGSGVEILENRPYTDGP--GG---SGQYTHKVYHV 65
>sp|Q9BZ72|PITM2_HUMAN Membrane-associated phosphatidylinositol transfer protein 2
OS=Homo sapiens GN=PITPNM2 PE=1 SV=1
Length = 1349
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 6/54 (11%)
Query: 10 YQVGQLYSVAEASKNET-GGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
Y++ QLY + + S+NET G G G+E+L N P+ + P GG GQYT K+YH+
Sbjct: 17 YRIAQLYMIQKKSRNETYGEGSGVEILENRPYTDGP--GG---SGQYTHKVYHV 65
>sp|Q54VC7|PITP3_DICDI Phosphatidylinositol transfer protein 3 OS=Dictyostelium
discoideum GN=pitC PE=3 SV=1
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
Y+V QL+ VA SK T GEGIEV+ N+P+ T G +T+KI+HL
Sbjct: 18 YKVAQLFMVATISKKNTSLGEGIEVIENKPY------ADGATTGFFTRKIFHL 64
>sp|Q9UKF7|PITC1_HUMAN Cytoplasmic phosphatidylinositol transfer protein 1 OS=Homo
sapiens GN=PITPNC1 PE=1 SV=2
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIY 60
Y++GQLY +++ S ++ GEG+EV+ NEPF++ G+FT+ K++Y
Sbjct: 17 YKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTE----KRVY 63
>sp|Q8K4R4|PITC1_MOUSE Cytoplasmic phosphatidylinositol transfer protein 1 OS=Mus
musculus GN=Pitpnc1 PE=1 SV=1
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIY 60
Y++GQLY +++ S ++ GEG+EV+ NEPF++ G+FT+ K++Y
Sbjct: 17 YKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTE----KRVY 63
>sp|Q28CA0|PITC1_XENTR Cytoplasmic phosphatidylinositol transfer protein 1 OS=Xenopus
tropicalis GN=pitpnc1 PE=2 SV=1
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 5/53 (9%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHL 62
Y++GQLY +++ S ++ GEG+EV+ NEP+++ P+ G +GQ T+K +L
Sbjct: 17 YRIGQLYMISKHSHEQSERGEGVEVVQNEPYED-PVHG----QGQLTEKRVYL 64
>sp|Q9U9P7|PITC1_DROME Cytoplasmic phosphatidylinositol transfer protein 1 OS=Drosophila
melanogaster GN=rdgBbeta PE=2 SV=1
Length = 273
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 10 YQVGQLYSVAEASKNETGGGEGIEVLVNEPFDNVPLLGGKFTKGQYTKKIYHLQRSSRQI 69
Y++GQLY +A S ++ GEG+EV+ N+P ++ P+ G KGQYT+K H+ SSR
Sbjct: 18 YKIGQLYMIARHSLEQSEEGEGVEVVENKPCED-PVHG----KGQYTEK--HIHLSSRLP 70
Query: 70 SRSELICVR 78
+ IC R
Sbjct: 71 YWIQAICPR 79
>sp|B8QGZ3|BGALA_PENEN Probable beta-galactosidase A OS=Penicillium expansum GN=lacA PE=2
SV=1
Length = 1011
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 43 VPLLGGKFTKGQYTKKI----YHLQRSSRQISRSELICVRKCEKNPPKTSFFGFLALWFS 98
+P LGG+ T KI Y + S+ S +E+ +K + G + + +
Sbjct: 459 IPQLGGELTLSGRDSKIHVTDYDVAGSNILYSTAEVFTWKKFDN--------GKVLILYG 510
Query: 99 GQNLHHHFRVPGKKTFNLIYRSTSPIYLKKLKE 131
G HH F V G ++I S+S I KK+ +
Sbjct: 511 GPGEHHEFAVTGASASSVIEGSSSGITSKKIGD 543
>sp|Q9HIM0|PYRC_THEAC Dihydroorotase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM
1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=pyrC PE=3
SV=1
Length = 414
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 69 ISRSELICVRKCEKNPPKTSFFGFLALWFSGQNLHHHFRVPGK 111
+S ++ ++K N PKT++ G A+ + ++H HFR PG+
Sbjct: 24 VSDGKIAGIKKDAGNVPKTNYDG--AILPAATDIHVHFRTPGE 64
>sp|Q6BNG2|DPOE_DEBHA DNA polymerase epsilon catalytic subunit A OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=POL2 PE=3 SV=2
Length = 2226
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 53 GQYTKKIYHLQRSSRQISRSELICVRK 79
Y++K+YH + S+ +SR ++C R+
Sbjct: 749 SDYSRKVYHRIKQSKTVSREAIVCQRE 775
>sp|P47253|Y007_MYCGE Uncharacterized protein MG007 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG007 PE=4 SV=1
Length = 254
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 22/90 (24%)
Query: 29 GEGIEVLVNEPFDNVPL-LGGKFTKGQYTKKIYHLQRSSRQISRSELI------------ 75
E IE + N F+ + L K T++IYH + R S SE+
Sbjct: 165 DEQIEAIENGSFNRFKIILDACLNKKTGTEQIYHAWQIFRDFSNSEIAQLITLIINKTEN 224
Query: 76 ---------CVRKCEKNPPKTSFFGFLALW 96
C++ NPPK++ F L W
Sbjct: 225 IDKKSILFNCLKVLPYNPPKSTLFANLVSW 254
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,855,728
Number of Sequences: 539616
Number of extensions: 2113871
Number of successful extensions: 3912
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3862
Number of HSP's gapped (non-prelim): 29
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)