Query psy11576
Match_columns 108
No_of_seqs 186 out of 684
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 22:02:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11576.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11576hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 99.8 4.7E-22 1.6E-26 151.1 3.8 86 15-104 80-191 (236)
2 3ubw_A 14-3-3E, 14-3-3 protein 99.8 1.1E-21 3.9E-26 150.9 5.1 86 15-104 103-214 (261)
3 3uzd_A 14-3-3 protein gamma; s 99.8 2.1E-21 7.1E-26 148.5 6.1 87 14-104 75-189 (248)
4 3efz_A 14-3-3 protein; 14-3-3, 99.8 4.7E-21 1.6E-25 147.8 7.2 86 15-104 100-212 (268)
5 2br9_A 14-3-3E, 14-3-3 protein 99.8 4.7E-21 1.6E-25 145.4 6.2 92 9-104 67-188 (234)
6 1o9d_A 14-3-3-like protein C; 99.8 3.7E-21 1.3E-25 148.0 5.6 87 14-104 80-193 (260)
7 2npm_A 14-3-3 domain containin 99.8 8.6E-21 2.9E-25 145.9 6.0 86 15-104 103-213 (260)
8 2o8p_A 14-3-3 domain containin 99.8 5.8E-20 2E-24 139.0 8.5 92 9-104 72-183 (227)
9 3iqu_A 14-3-3 protein sigma; s 99.7 8.3E-19 2.8E-23 133.3 2.7 70 39-108 62-135 (236)
10 3uzd_A 14-3-3 protein gamma; s 99.7 1.1E-18 3.9E-23 133.4 3.0 71 38-108 57-133 (248)
11 3ubw_A 14-3-3E, 14-3-3 protein 99.7 1.6E-18 5.4E-23 133.4 2.4 71 38-108 84-158 (261)
12 2o8p_A 14-3-3 domain containin 99.7 3.9E-18 1.3E-22 129.0 3.7 67 39-108 64-132 (227)
13 2br9_A 14-3-3E, 14-3-3 protein 99.7 3.5E-18 1.2E-22 129.6 2.4 88 15-108 41-132 (234)
14 1o9d_A 14-3-3-like protein C; 99.7 4.4E-18 1.5E-22 130.8 2.4 70 39-108 64-137 (260)
15 2npm_A 14-3-3 domain containin 99.7 5.2E-18 1.8E-22 130.5 2.4 69 40-108 86-158 (260)
16 3efz_A 14-3-3 protein; 14-3-3, 99.7 7.3E-18 2.5E-22 130.1 2.9 69 39-108 80-154 (268)
17 1use_A VAsp, vasodilator-stimu 63.2 18 0.00062 20.4 4.6 33 20-52 8-40 (45)
18 1lyp_A CAP18; lipopolysacchari 58.5 17 0.00059 18.6 3.8 24 59-82 6-29 (32)
19 3he5_A Synzip1; heterodimeric 44.1 41 0.0014 18.7 3.9 24 27-50 3-26 (49)
20 2yf2_A C4B binding protein; im 36.9 39 0.0013 20.0 3.2 24 22-47 38-61 (65)
21 3vem_A Helicase protein MOM1; 36.0 56 0.0019 21.8 4.3 75 32-107 37-113 (115)
22 1txp_A HnRNP C, heterogeneous 31.4 55 0.0019 16.5 3.3 20 30-49 2-21 (28)
23 1dw0_A Cytochrome C; asparagin 28.0 44 0.0015 22.1 2.7 29 30-64 79-107 (112)
24 1t7s_A BAG-1 cochaperone; stru 21.0 1.9E+02 0.0067 19.7 5.0 39 12-51 90-128 (137)
25 3kmi_A Putative membrane prote 20.4 2.2E+02 0.0075 19.7 7.0 27 17-47 6-32 (177)
26 1rv3_A Serine hydroxymethyltra 20.1 2.6E+02 0.0089 21.5 6.3 56 33-88 414-479 (483)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=99.84 E-value=4.7e-22 Score=151.15 Aligned_cols=86 Identities=24% Similarity=0.309 Sum_probs=74.3
Q ss_pred chhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc---------hhhhHHHHHHH-----HHHHHHHHHHHH--
Q psy11576 15 NHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA---------LTGALLKRERV-----EKELKDICSDIL-- 78 (108)
Q Consensus 15 ~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~---------~Km~~dY~rki-----e~El~~ic~e~l-- 78 (108)
+.+++++++||+ |||+||.++|++||++||++|+|+. .||+|||+|.+ +++..++++.+.
T Consensus 80 ~~~~~~i~~yr~----kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~a 155 (236)
T 3iqu_A 80 EEKGPEVREYRE----KVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSA 155 (236)
T ss_dssp CCCCSHHHHHHH----HHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHH
Confidence 467899999999 9999999999999999999999975 89999999955 344444444332
Q ss_pred ----------HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 79 ----------NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 79 ----------~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
+|.++|||++|+++|+|||||++.|+
T Consensus 156 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~ 191 (236)
T 3iqu_A 156 YQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANS 191 (236)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 58899999999999999999999987
No 2
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=99.84 E-value=1.1e-21 Score=150.86 Aligned_cols=86 Identities=33% Similarity=0.493 Sum_probs=75.9
Q ss_pred chhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc---------hhhhHHHHHHH-----HHHHHHHHHHHH--
Q psy11576 15 NHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA---------LTGALLKRERV-----EKELKDICSDIL-- 78 (108)
Q Consensus 15 ~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~---------~Km~~dY~rki-----e~El~~ic~e~l-- 78 (108)
+.+++++++||+ |||+||.++|++||++||++|+|+. .||+|||+|.+ +++..++++.+.
T Consensus 103 ~~~~~~i~~yr~----kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~a 178 (261)
T 3ubw_A 103 EDKLKMIREYRQ----MVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVA 178 (261)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHH
Confidence 368899999999 9999999999999999999999975 89999999955 566666665433
Q ss_pred ----------HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 79 ----------NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 79 ----------~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
+|.++|||++|+++|+|||||+++|+
T Consensus 179 Y~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~ 214 (261)
T 3ubw_A 179 YKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 214 (261)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 58899999999999999999999987
No 3
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=99.84 E-value=2.1e-21 Score=148.52 Aligned_cols=87 Identities=23% Similarity=0.399 Sum_probs=74.7
Q ss_pred CchhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc-----------hhhhHHHHHHH-----HHHHHHHHHHH
Q psy11576 14 GNHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA-----------LTGALLKRERV-----EKELKDICSDI 77 (108)
Q Consensus 14 ~~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~-----------~Km~~dY~rki-----e~El~~ic~e~ 77 (108)
++.+++++++||+ |||+||.++|++||++||++|+|+. .||+|||+|.+ +++...+.+.+
T Consensus 75 ~~~~~~~i~~yr~----kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a 150 (248)
T 3uzd_A 75 NEKKIEMVRAYRE----KIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESS 150 (248)
T ss_dssp CCC-HHHHHHHHH----HHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH----HHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHH
Confidence 3468899999999 9999999999999999999999964 68999999955 56666665543
Q ss_pred H------------HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 78 L------------NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 78 l------------~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
. +|.++|||++|+++|+|||||++.|+
T Consensus 151 ~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~ 189 (248)
T 3uzd_A 151 EKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNA 189 (248)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 3 48899999999999999999999987
No 4
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=99.83 E-value=4.7e-21 Score=147.85 Aligned_cols=86 Identities=8% Similarity=0.115 Sum_probs=76.0
Q ss_pred chhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc--------hhhhHHHHHHH-----HHHHHHHHHHHH---
Q psy11576 15 NHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA--------LTGALLKRERV-----EKELKDICSDIL--- 78 (108)
Q Consensus 15 ~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~--------~Km~~dY~rki-----e~El~~ic~e~l--- 78 (108)
+.+++++++||+ |||+||.++|++||++||++|+|.. .||+|||+|.+ +++..++++.+.
T Consensus 100 ~~~~~~i~~yr~----kie~EL~~iC~diL~llD~~Lip~a~~~skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aY 175 (268)
T 3efz_A 100 NEFIQVIEDIKR----DFEESILLESEDVIRIIDDNLLMYSEEGARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFY 175 (268)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhcccCCchhHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 468899999999 9999999999999999999999976 89999999955 566666665443
Q ss_pred ---------Hh--hhhCcCCCCCccchhhhHhhhccc
Q psy11576 79 ---------NV--LSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 79 ---------~L--id~~lI~~~~~ln~sVFYykmkgD 104 (108)
+| .++|||++|+++|+|||||+++|+
T Consensus 176 q~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~ 212 (268)
T 3efz_A 176 EDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGN 212 (268)
T ss_dssp HHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCC
Confidence 47 999999999999999999999987
No 5
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=99.83 E-value=4.7e-21 Score=145.45 Aligned_cols=92 Identities=33% Similarity=0.500 Sum_probs=78.2
Q ss_pred cccCC---Cc-hhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc---------hhhhHHHHHHH-----HHHH
Q psy11576 9 IGDNT---GN-HMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA---------LTGALLKRERV-----EKEL 70 (108)
Q Consensus 9 ~~~~~---~~-~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~---------~Km~~dY~rki-----e~El 70 (108)
|+|++ |+ .+++++++||+ |||+||..+|++|+++||++|+|.. .||+|||+|.+ +++.
T Consensus 67 ieqk~~~k~~~~~~~~i~~yr~----kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r 142 (234)
T 2br9_A 67 IEQKEENKGGEDKLKMIREYRQ----MVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDR 142 (234)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHhhccCchHHHHHHHHHHH----HHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHH
Confidence 45552 43 68899999999 9999999999999999999999975 79999999955 4566
Q ss_pred HHHHHHHH------------HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 71 KDICSDIL------------NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 71 ~~ic~e~l------------~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
.++++.+. +|.++|||++|+++|++||||++.||
T Consensus 143 ~~~~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~ 188 (234)
T 2br9_A 143 KEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNS 188 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 66655443 48999999999999999999999987
No 6
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=99.83 E-value=3.7e-21 Score=147.96 Aligned_cols=87 Identities=31% Similarity=0.476 Sum_probs=75.6
Q ss_pred Cc-hhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc---------hhhhHHHHHHH-----HHHHHHHHHHHH
Q psy11576 14 GN-HMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA---------LTGALLKRERV-----EKELKDICSDIL 78 (108)
Q Consensus 14 ~~-~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~---------~Km~~dY~rki-----e~El~~ic~e~l 78 (108)
|+ .+++++++||+ |||+||..+|++||++||++|+|+. .||+|||+|.+ +++..++++.++
T Consensus 80 ~~~~~~~~i~~yr~----kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~ 155 (260)
T 1o9d_A 80 GNEEHVNSIREYRS----KIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL 155 (260)
T ss_dssp TCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH----HHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHH
Confidence 44 68899999999 9999999999999999999999975 89999999955 355665554433
Q ss_pred ------------HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 79 ------------NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 79 ------------~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
+|.++|||++|+++|+|||||++.|+
T Consensus 156 ~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~ 193 (260)
T 1o9d_A 156 TAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNS 193 (260)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccC
Confidence 48999999999999999999999987
No 7
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=99.82 E-value=8.6e-21 Score=145.94 Aligned_cols=86 Identities=30% Similarity=0.429 Sum_probs=74.7
Q ss_pred chhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc---------hhhhHHHHHHH-----HHHHHHHHHHHH--
Q psy11576 15 NHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA---------LTGALLKRERV-----EKELKDICSDIL-- 78 (108)
Q Consensus 15 ~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~---------~Km~~dY~rki-----e~El~~ic~e~l-- 78 (108)
+.+++++++||+ |||+||..+|++||++||++|+|.. .||+|||+|.+ +++..++++.+.
T Consensus 103 ~~~~~~i~~yr~----kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~a 178 (260)
T 2npm_A 103 EDASKMCGKYRS----KVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKA 178 (260)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHH
Confidence 368899999999 9999999999999999999999975 79999999955 456666554333
Q ss_pred ---------HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 79 ---------NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 79 ---------~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
+|.++|||++|+++|+|||||++.|+
T Consensus 179 Y~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~ 213 (260)
T 2npm_A 179 YKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNE 213 (260)
T ss_dssp HHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCC
Confidence 48899999999999999999999987
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=99.81 E-value=5.8e-20 Score=138.98 Aligned_cols=92 Identities=10% Similarity=0.027 Sum_probs=74.6
Q ss_pred cccCC-Cc-hhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccc------hhhhHHHHHHHHH------HH----
Q psy11576 9 IGDNT-GN-HMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHLIPCA------LTGALLKRERVEK------EL---- 70 (108)
Q Consensus 9 ~~~~~-~~-~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Lip~~------~Km~~dY~rkie~------El---- 70 (108)
|+|++ |+ .+++++++||+ +||+||.++|++|++++|++|+|+. .||+|||+|.+.+ +.
T Consensus 72 iEqkek~~~~~~~~i~~yr~----kie~EL~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~a 147 (227)
T 2o8p_A 72 EQTKQLNNDELVKICSEYVF----SLRKDIKAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKI 147 (227)
T ss_dssp HHHHSCSCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHH----HHHHHHHHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHH
Confidence 45552 44 68899999999 9999999999999999999999974 9999999996531 11
Q ss_pred HHHHHHHH--HhhhhCcCCCCCccchhhhHhhhccc
Q psy11576 71 KDICSDIL--NVLSKHLIPCALTGESKVFYYKMKDG 104 (108)
Q Consensus 71 ~~ic~e~l--~Lid~~lI~~~~~ln~sVFYykmkgD 104 (108)
-+.+.++. +|.++|||++|+++|+|||||+++++
T Consensus 148 Y~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~ 183 (227)
T 2o8p_A 148 HQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGE 183 (227)
T ss_dssp HHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccC
Confidence 11122222 48999999999999999999999987
No 9
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=99.73 E-value=8.3e-19 Score=133.30 Aligned_cols=70 Identities=31% Similarity=0.422 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhc----ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCccchhhhHhhhcccccCC
Q psy11576 39 ICSDILNVLSKH----LIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 39 ~C~~vL~lid~~----Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~ln~sVFYykmkgDYyRY 108 (108)
-.+.+++.++.. ..+..++++.+|++++++||..+|+++++++|++|||.+++.+++|||+|||||||||
T Consensus 62 ~swRiissieqke~~~~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRY 135 (236)
T 3iqu_A 62 AAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRY 135 (236)
T ss_dssp HHHHHHHHHHHHHTSTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHH
Confidence 345666655543 3455689999999999999999999999999999999999999999999999999998
No 10
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=99.72 E-value=1.1e-18 Score=133.36 Aligned_cols=71 Identities=30% Similarity=0.425 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhc----ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCcc--chhhhHhhhcccccCC
Q psy11576 38 DICSDILNVLSKH----LIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTG--ESKVFYYKMKDGLKKV 108 (108)
Q Consensus 38 ~~C~~vL~lid~~----Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~l--n~sVFYykmkgDYyRY 108 (108)
.-.+.+++.++.. ......+++.+||+++++||..+|+++++++|++|||.+++. +++|||+|||||||||
T Consensus 57 R~swRiissieqke~~~~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRY 133 (248)
T 3uzd_A 57 RSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRY 133 (248)
T ss_dssp HHHHHHHHHHHHHHC---CCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHH
Confidence 3456666666543 344568999999999999999999999999999999999999 9999999999999998
No 11
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=99.71 E-value=1.6e-18 Score=133.38 Aligned_cols=71 Identities=46% Similarity=0.591 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhc----ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCccchhhhHhhhcccccCC
Q psy11576 38 DICSDILNVLSKH----LIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 38 ~~C~~vL~lid~~----Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~ln~sVFYykmkgDYyRY 108 (108)
.-.+.+++.++.. .....++++.+||+++++||..+|+++++++|++|||.+++.+++|||+|||||||||
T Consensus 84 R~swRiissieqkee~~g~~~~~~~i~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRY 158 (261)
T 3ubw_A 84 RASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRY 158 (261)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHH
Confidence 3356677666543 3345688999999999999999999999999999999999999999999999999998
No 12
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=99.70 E-value=3.9e-18 Score=128.96 Aligned_cols=67 Identities=10% Similarity=0.017 Sum_probs=58.5
Q ss_pred HHHHHHHHHHhcc--cccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCccchhhhHhhhcccccCC
Q psy11576 39 ICSDILNVLSKHL--IPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 39 ~C~~vL~lid~~L--ip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~ln~sVFYykmkgDYyRY 108 (108)
-.+.+++.++... .....+++.+|+.++++||..+|+++++++|++|||.+ +++|||+|||||||||
T Consensus 64 ~swRiissiEqkek~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRY 132 (227)
T 2o8p_A 64 TMTSQVLQEQTKQLNNDELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRY 132 (227)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHH
Confidence 3566777776543 33458899999999999999999999999999999998 9999999999999998
No 13
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=99.69 E-value=3.5e-18 Score=129.64 Aligned_cols=88 Identities=41% Similarity=0.495 Sum_probs=67.9
Q ss_pred chhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc----ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCC
Q psy11576 15 NHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKH----LIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCAL 90 (108)
Q Consensus 15 ~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~----Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~ 90 (108)
+..-=+...|+. +-..-+. .+.+++.++.. ......+++.+|++++++||..+|+++++++|++|||.++
T Consensus 41 EERnLLsvayKn-----vig~rR~-swRiissieqk~~~k~~~~~~~~i~~yr~kie~EL~~iC~~il~lld~~Lip~a~ 114 (234)
T 2br9_A 41 EERNLLSVAYKN-----VIGARRA-SWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAAN 114 (234)
T ss_dssp HHHHHHHHHHHH-----HHHHHHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCC
T ss_pred HHHHHHHHHHHH-----HHhhhHH-HHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCCC
Confidence 333345556664 2222222 45666655443 2345688999999999999999999999999999999999
Q ss_pred ccchhhhHhhhcccccCC
Q psy11576 91 TGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 91 ~ln~sVFYykmkgDYyRY 108 (108)
+.+++|||+|||||||||
T Consensus 115 ~~eskVFy~KmKGDyyRY 132 (234)
T 2br9_A 115 TGESKVFYYKMKGDYHRY 132 (234)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHhccHHHH
Confidence 999999999999999998
No 14
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=99.69 E-value=4.4e-18 Score=130.82 Aligned_cols=70 Identities=33% Similarity=0.524 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhc----ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCccchhhhHhhhcccccCC
Q psy11576 39 ICSDILNVLSKH----LIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 39 ~C~~vL~lid~~----Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~ln~sVFYykmkgDYyRY 108 (108)
-.+.+++.++.. ......+++.+|++++++||..+|+++++++|++|||.+++.+++|||+|||||||||
T Consensus 64 ~swRiissieqke~~k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRY 137 (260)
T 1o9d_A 64 ASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRY 137 (260)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHH
Confidence 345556555443 2345688999999999999999999999999999999999999999999999999998
No 15
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=99.69 E-value=5.2e-18 Score=130.45 Aligned_cols=69 Identities=41% Similarity=0.584 Sum_probs=59.3
Q ss_pred HHHHHHHHHhc----ccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCccchhhhHhhhcccccCC
Q psy11576 40 CSDILNVLSKH----LIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 40 C~~vL~lid~~----Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~ln~sVFYykmkgDYyRY 108 (108)
.+.+++.++.. ......+++.+|++++++||..+|+++++++|++|||.+++.+++|||+|||||||||
T Consensus 86 swRiissieqke~~k~~~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRY 158 (260)
T 2npm_A 86 SWRIISSVEQKEHSRNAEDASKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRY 158 (260)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHH
Confidence 34555555433 2345678999999999999999999999999999999999999999999999999998
No 16
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=99.68 E-value=7.3e-18 Score=130.06 Aligned_cols=69 Identities=13% Similarity=0.197 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhcc-----c-ccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCCCCccchhhhHhhhcccccCC
Q psy11576 39 ICSDILNVLSKHL-----I-PCALTGALLKRERVEKELKDICSDILNVLSKHLIPCALTGESKVFYYKMKDGLKKV 108 (108)
Q Consensus 39 ~C~~vL~lid~~L-----i-p~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~~~~ln~sVFYykmkgDYyRY 108 (108)
-.+.+++.++..- . +...+++.+|++++++||..+|+++++++|++|||.+++. ++|||+|||||||||
T Consensus 80 ~swRiissieqke~e~kg~~~~~~~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRY 154 (268)
T 3efz_A 80 NSLKSIKSQEEKLRKEKSLNNEFIQVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRY 154 (268)
T ss_dssp HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHH
Confidence 3566666555432 3 5568899999999999999999999999999999999888 999999999999998
No 17
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=63.19 E-value=18 Score=20.40 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=25.9
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccc
Q psy11576 20 LLHYYEENIMLQVEKELKDICSDILNVLSKHLI 52 (108)
Q Consensus 20 ~~~~y~~~~~~kie~EL~~~C~~vL~lid~~Li 52 (108)
-+..+++.|...+.+||...=++||+.+.+-|.
T Consensus 8 dle~~KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 8 DLQRVKQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666677778888999999999999877553
No 18
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=58.52 E-value=17 Score=18.63 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhh
Q psy11576 59 ALLKRERVEKELKDICSDILNVLS 82 (108)
Q Consensus 59 ~~dY~rkie~El~~ic~e~l~Lid 82 (108)
.+.|+.++.+.+..+.+.+..+++
T Consensus 6 lrkfrnkikeklkkigqkiqgllp 29 (32)
T 1lyp_A 6 LRKFRNKIKEKLKKIGQKIQGLLP 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344555555555555555554443
No 19
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=44.13 E-value=41 Score=18.72 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhc
Q psy11576 27 NIMLQVEKELKDICSDILNVLSKH 50 (108)
Q Consensus 27 ~~~~kie~EL~~~C~~vL~lid~~ 50 (108)
|+++++|.|...+-++--.+-.+.
T Consensus 3 nlvaqlenevaslenenetlkkkn 26 (49)
T 3he5_A 3 NLVAQLENEVASLENENETLKKKN 26 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcccHHHHHhc
Confidence 345678888777766655444443
No 20
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=36.93 E-value=39 Score=19.95 Aligned_cols=24 Identities=17% Similarity=0.443 Sum_probs=18.7
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy11576 22 HYYEENIMLQVEKELKDICSDILNVL 47 (108)
Q Consensus 22 ~~y~~~~~~kie~EL~~~C~~vL~li 47 (108)
+-|-+ +||++.||..+..+.+.-|
T Consensus 38 KL~LE--IQKL~~EL~glskeflehi 61 (65)
T 2yf2_A 38 KLFLE--IQKLKVELQGLSKEFLEHI 61 (65)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHcchhHHHHHHH
Confidence 34555 7799999999999988654
No 21
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=36.01 E-value=56 Score=21.83 Aligned_cols=75 Identities=9% Similarity=-0.034 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHHHHhhhhCcCCC-C-CccchhhhHhhhcccccC
Q psy11576 32 VEKELKDICSDILNVLSKHLIPCALTGALLKRERVEKELKDICSDILNVLSKHLIPC-A-LTGESKVFYYKMKDGLKK 107 (108)
Q Consensus 32 ie~EL~~~C~~vL~lid~~Lip~~~Km~~dY~rkie~El~~ic~e~l~Lid~~lI~~-~-~~ln~sVFYykmkgDYyR 107 (108)
+-.||..++.+.-++...+- ....+++.++-+.+++=....+.-..++=..++-.. . .+...+||-.++.+|-||
T Consensus 37 L~~ELeRLr~~~d~~~K~HE-~kklqLkse~e~E~ae~k~KYD~~lqe~ese~~~kkK~le~~~~kV~mNk~LAe~Fr 113 (115)
T 3vem_A 37 FLHELEKLRRESENSKKTFE-EKKSILKAELERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKNLVIMNKLLANAFL 113 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567777766666666552 234566666666555444444433333222222111 1 134678898888888877
No 22
>1txp_A HnRNP C, heterogeneous nuclear ribonucleoprotein C protein; antiparallel four helix coiled coil tetramer HNRNPC, signaling protein; NMR {Homo sapiens}
Probab=31.38 E-value=55 Score=16.53 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy11576 30 LQVEKELKDICSDILNVLSK 49 (108)
Q Consensus 30 ~kie~EL~~~C~~vL~lid~ 49 (108)
|.|.+||..|=..|-+++.+
T Consensus 2 Q~IkkELtQIK~kvDsLLe~ 21 (28)
T 1txp_A 2 QAIKKELTQIKQKVDSLLEN 21 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 36788888888888777765
No 23
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=28.00 E-value=44 Score=22.08 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHH
Q psy11576 30 LQVEKELKDICSDILNVLSKHLIPCALTGALLKRE 64 (108)
Q Consensus 30 ~kie~EL~~~C~~vL~lid~~Lip~~~Km~~dY~r 64 (108)
.|||+.+..-|++|+. ..+...-++||-.
T Consensus 79 akvekwf~rnc~~v~g------r~cta~EK~d~l~ 107 (112)
T 1dw0_A 79 ARVEKWLGRNCNSVIG------RDCTPGEKADLLA 107 (112)
T ss_dssp HHHHHHHHHHHHHHHS------SCCCHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHc------ccCCHHHHHHHHH
Confidence 3899999999999985 2344555566543
No 24
>1t7s_A BAG-1 cochaperone; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.80A {Caenorhabditis elegans} SCOP: a.7.7.1
Probab=21.05 E-value=1.9e+02 Score=19.70 Aligned_cols=39 Identities=10% Similarity=0.071 Sum_probs=29.5
Q ss_pred CCCchhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcc
Q psy11576 12 NTGNHMVTLLHYYEENIMLQVEKELKDICSDILNVLSKHL 51 (108)
Q Consensus 12 ~~~~~~~~~~~~y~~~~~~kie~EL~~~C~~vL~lid~~L 51 (108)
+|..++.+-.+.+|+.++.+|.. +-+-|+.+..-|+.++
T Consensus 90 ~t~~~q~~~~R~KRK~lV~~IQ~-~L~~~D~l~~~i~~~~ 128 (137)
T 1t7s_A 90 TTPENQAKRNREKRKTLVNGIQT-LLNQNDALLRRLQEYQ 128 (137)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHHhhHHHHHHH-HHHHhHHHHHHHHHHH
Confidence 44555578888999988888887 6667888888877654
No 25
>3kmi_A Putative membrane protein COG4129; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.96A {Clostridium difficile}
Probab=20.45 E-value=2.2e+02 Score=19.66 Aligned_cols=27 Identities=15% Similarity=0.368 Sum_probs=22.7
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q psy11576 17 MVTLLHYYEENIMLQVEKELKDICSDILNVL 47 (108)
Q Consensus 17 ~~~~~~~y~~~~~~kie~EL~~~C~~vL~li 47 (108)
..+.+++|++ +||++++.|-.++-..+
T Consensus 6 ~e~~l~~~~~----~IE~~~k~Il~~~a~~L 32 (177)
T 3kmi_A 6 NIHKIHEVQK----KLQEEVSIVLIDIADII 32 (177)
T ss_dssp CHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 3467889999 99999999988887776
No 26
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=20.14 E-value=2.6e+02 Score=21.51 Aligned_cols=56 Identities=9% Similarity=0.121 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHhccccc----chhhhHHHHHHHH--H----HHHHHHHHHHHhhhhCcCCC
Q psy11576 33 EKELKDICSDILNVLSKHLIPC----ALTGALLKRERVE--K----ELKDICSDILNVLSKHLIPC 88 (108)
Q Consensus 33 e~EL~~~C~~vL~lid~~Lip~----~~Km~~dY~rkie--~----El~~ic~e~l~Lid~~lI~~ 88 (108)
++|+..+++-+-+++....-+. ..+...++++.+. . ++.++-.++.++...+|+|.
T Consensus 414 ~edi~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (483)
T 1rv3_A 414 EKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 479 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTTSCCCS
T ss_pred HHHHHHHHHHHHHHHHhccchhccccccchhhHHHHhhccccchhHHHHHHHHHHHHHHHhCCCCC
Confidence 5677777776666665422111 1124668888775 2 67788899999999999873
Done!