BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11577
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U9P7|PITC1_DROME Cytoplasmic phosphatidylinositol transfer protein 1 OS=Drosophila
melanogaster GN=rdgBbeta PE=2 SV=1
Length = 273
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 31/44 (70%)
Query: 44 DLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
DL D+LKVR V H+DI D VSA YK+ EDP FKSEKT RG
Sbjct: 126 DLTEDELKVRTVDHLDIAFDEVSAKHYKKEEDPKFFKSEKTNRG 169
>sp|Q54VC7|PITP3_DICDI Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum
GN=pitC PE=3 SV=1
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 44 DLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
+L +++L +REV HIDI NDP+ YK EDP F+S KTGRG
Sbjct: 126 NLNSEELSIREVEHIDIVNDPIDEAHYKPEEDPKIFQSVKTGRG 169
>sp|P48738|PIPNA_RABIT Phosphatidylinositol transfer protein alpha isoform OS=Oryctolagus
cuniculus GN=PITPNA PE=3 SV=2
Length = 270
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K EV++IDI + V + DYK EDPAKFKS KTGRG
Sbjct: 125 VHKLEPETWKHVEVIYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRG 171
>sp|Q2HJ54|PIPNA_BOVIN Phosphatidylinositol transfer protein alpha isoform OS=Bos taurus
GN=PITPNA PE=1 SV=3
Length = 270
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K EV++IDI + V + DYK EDPAK+KS KTGRG
Sbjct: 125 VHKLEPEAWKHVEVIYIDIADRSQVLSKDYKAEEDPAKYKSIKTGRG 171
>sp|Q8K4R4|PITC1_MOUSE Cytoplasmic phosphatidylinositol transfer protein 1 OS=Mus musculus
GN=Pitpnc1 PE=1 SV=1
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 24/35 (68%)
Query: 53 REVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
REV IDI D + YKE+EDP FKSEKTGRG
Sbjct: 133 REVCFIDIACDEIPERYYKESEDPKHFKSEKTGRG 167
>sp|Q9UKF7|PITC1_HUMAN Cytoplasmic phosphatidylinositol transfer protein 1 OS=Homo sapiens
GN=PITPNC1 PE=1 SV=2
Length = 332
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 24/35 (68%)
Query: 53 REVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
REV IDI D + YKE+EDP FKSEKTGRG
Sbjct: 133 REVCFIDIACDEIPERYYKESEDPKHFKSEKTGRG 167
>sp|Q00169|PIPNA_HUMAN Phosphatidylinositol transfer protein alpha isoform OS=Homo sapiens
GN=PITPNA PE=1 SV=2
Length = 270
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E V+IDI + V + DYK EDPAKFKS KTGRG
Sbjct: 125 VHKLEPEAWKHVEAVYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRG 171
>sp|P53810|PIPNA_MOUSE Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus
GN=Pitpna PE=1 SV=2
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E ++IDI + V + DYK EDPAKFKS KTGRG
Sbjct: 126 VHKLEPEAWKHVEAIYIDIADRSQVLSKDYKAEEDPAKFKSVKTGRG 172
>sp|P16446|PIPNA_RAT Phosphatidylinositol transfer protein alpha isoform OS=Rattus
norvegicus GN=Pitpna PE=1 SV=2
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E ++IDI + V + DYK EDPAKFKS KTGRG
Sbjct: 126 VHKLEPEAWKHVEAIYIDIADRSQVLSKDYKAEEDPAKFKSIKTGRG 172
>sp|Q5R6F0|PIPNB_PONAB Phosphatidylinositol transfer protein beta isoform OS=Pongo abelii
GN=PITPNB PE=2 SV=3
Length = 272
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E+VHIDI + V DYK EDPA F+S KT RG
Sbjct: 125 VHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRG 171
>sp|P48739|PIPNB_HUMAN Phosphatidylinositol transfer protein beta isoform OS=Homo sapiens
GN=PITPNB PE=1 SV=2
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E+VHIDI + V DYK EDPA F+S KT RG
Sbjct: 125 VHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRG 171
>sp|P53812|PIPNB_RAT Phosphatidylinositol transfer protein beta isoform OS=Rattus
norvegicus GN=Pitpnb PE=1 SV=2
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E+VHIDI + V DYK EDPA F+S KT RG
Sbjct: 125 VHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRG 171
>sp|Q9TR36|PIPNB_BOVIN Phosphatidylinositol transfer protein beta isoform OS=Bos taurus
GN=PITPNB PE=1 SV=3
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E+VHIDI + V DYK EDPA F+S KT RG
Sbjct: 125 VHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFQSVKTKRG 171
>sp|P53811|PIPNB_MOUSE Phosphatidylinositol transfer protein beta isoform OS=Mus musculus
GN=Pitpnb PE=1 SV=2
Length = 271
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 42 VHDLPADKLKVREVVHIDIGN-DPVSAGDYKETEDPAKFKSEKTGRG 87
VH L + K E+VHIDI + V DYK EDPA F S KT RG
Sbjct: 125 VHGLDPNTWKTVEIVHIDIADRSQVEPADYKADEDPALFHSVKTKRG 171
>sp|Q54D93|PITP4_DICDI Phosphatidylinositol transfer protein 4 OS=Dictyostelium discoideum
GN=pitD PE=3 SV=2
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 34 EELPGFGLVHDLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
EE FGL D+ LK R V H+DI D V D K EDP FKS+ TGRG
Sbjct: 121 EEENVFGLSKDI----LKKRIVDHVDIARDEVEGKDVKTDEDPRMFKSKLTGRG 170
>sp|Q28CA0|PITC1_XENTR Cytoplasmic phosphatidylinositol transfer protein 1 OS=Xenopus
tropicalis GN=pitpnc1 PE=2 SV=1
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 53 REVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
RE+ +DI D + YKE+EDP F SEKTGRG
Sbjct: 133 REICFVDIACDEIPERYYKESEDPKNFVSEKTGRG 167
>sp|Q9NCL8|PITP1_DICDI Phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum
GN=pitA PE=1 SV=1
Length = 264
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 42 VHDLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
+H+L +LK R V IDI +YKETEDP K +SEK RG
Sbjct: 124 IHNLSEKELKERTVEVIDITKPIKDPKNYKETEDPTKIRSEKANRG 169
>sp|O35954|PITM1_MOUSE Membrane-associated phosphatidylinositol transfer protein 1 OS=Mus
musculus GN=Pitpnm1 PE=1 SV=1
Length = 1243
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 42 VHDLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
V +L + + R V IDI D V+ G+YK EDP ++S KTGRG
Sbjct: 125 VFNLSGAERRQRIVDTIDIVRDAVAPGEYKAEEDPRLYRSAKTGRG 170
>sp|P43125|RDGB_DROME Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB
PE=1 SV=2
Length = 1259
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 42 VHDLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
V L L+ R V IDI D + GDY + EDP F S+KTGRG
Sbjct: 125 VFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRG 170
>sp|Q5U2N3|PITM1_RAT Membrane-associated phosphatidylinositol transfer protein 1
OS=Rattus norvegicus GN=Pitpnm1 PE=2 SV=1
Length = 1242
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 42 VHDLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
V +L + + R + IDI D V+ G+YK EDP ++S KTGRG
Sbjct: 125 VFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPRLYRSVKTGRG 170
>sp|O00562|PITM1_HUMAN Membrane-associated phosphatidylinositol transfer protein 1 OS=Homo
sapiens GN=PITPNM1 PE=1 SV=4
Length = 1244
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 42 VHDLPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
V +L + + R + IDI D V+ G+YK EDP + S KTGRG
Sbjct: 125 VFNLSGAERRQRILDTIDIVRDAVAPGEYKAEEDPRLYHSVKTGRG 170
>sp|Q9BZ72|PITM2_HUMAN Membrane-associated phosphatidylinositol transfer protein 2 OS=Homo
sapiens GN=PITPNM2 PE=1 SV=1
Length = 1349
Score = 36.2 bits (82), Expect = 0.070, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 58 IDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
IDI DPV +YK EDP F+S KT RG
Sbjct: 141 IDIVKDPVPHNEYKTEEDPKLFQSTKTQRG 170
>sp|Q6ZPQ6|PITM2_MOUSE Membrane-associated phosphatidylinositol transfer protein 2 OS=Mus
musculus GN=Pitpnm2 PE=1 SV=2
Length = 1335
Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 58 IDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
IDI DPV +YK EDP F+S KT RG
Sbjct: 141 IDIVKDPVPPSEYKTEEDPKLFQSVKTCRG 170
>sp|Q9NCL7|PITP2_DICDI Phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum
GN=pitB PE=2 SV=1
Length = 259
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 36 LPGFGLVHD---LPADKLKVREVVHIDIGNDPVSAGDYKETEDPAKFKSEKTGRG 87
LPG G V + A+ LK R V IDI ND +Y + EDP FKS KT RG
Sbjct: 115 LPGRGEVENALKCDAETLKQRHVDFIDIAND--QPKEYIKEEDPKIFKSVKTERG 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,386,872
Number of Sequences: 539616
Number of extensions: 2101653
Number of successful extensions: 35049
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 25753
Number of HSP's gapped (non-prelim): 6305
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 55 (25.8 bits)