BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11580
(288 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/218 (85%), Positives = 198/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/218 (85%), Positives = 198/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/218 (85%), Positives = 198/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 205 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 242
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 302 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 361
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 197/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 145
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMM P+VVTRYYRAPEVILGMGYK
Sbjct: 146 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYK 205
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 206 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 243
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 303 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 362
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/218 (84%), Positives = 197/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANL QVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/218 (84%), Positives = 197/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTP VVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 386 bits (991), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 197/218 (90%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK+VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANL QVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 196/218 (89%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANL QVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 383 bits (983), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 196/218 (89%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK+VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANL QVIQM+LDHERMSYLLYQML GIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/218 (83%), Positives = 195/218 (89%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK+VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANL QVIQM+LDHERMSYLLYQML GIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVG IMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/218 (83%), Positives = 195/218 (89%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK+VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANL QVIQM+LDHERMSYLLYQML GIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVG IMGEMI+GGVLFPGTDHIDQWNK+I ++
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 339 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 398
Query: 61 PISHQMGK 68
S + K
Sbjct: 399 MNSEEKTK 406
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 181
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 339 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 398
Query: 61 PISHQMGK 68
S + K
Sbjct: 399 MNSEEKTK 406
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 360
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 202
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 240
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 300 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 359
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 360
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 302 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 361
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 295 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 354
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 294 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 353
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 302 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 361
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/218 (82%), Positives = 193/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 295 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 354
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 377 bits (967), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 194/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVD+WSVGCIMGEM+ +LFPG D+IDQWNK+I ++
Sbjct: 198 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 235
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 295 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 354
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 376 bits (966), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 194/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 148
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 149 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 208
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVD+WSVGCIMGEM+ +LFPG D+IDQWNK+I ++
Sbjct: 209 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 246
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 306 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 365
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 192/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 11/60 (18%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+ DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINVWYXXXX-----------XXDEREHTIEEWKELIYKEV 349
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 192/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMM P VVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+ +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 192/218 (88%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD ++NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NIIGLLN FTPQKSLEEFQDVY+VMELMDANLCQVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT+FMM P VVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVD+WSVGCIMGEM+ +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 48/60 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVID KRISVD+AL HPYINVW+D +E AP P D +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELIYKEV 360
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 191/218 (87%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANL QVIQM+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 43/60 (71%), Gaps = 9/60 (15%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D A DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINVWYDPAXXXX---------XDEREHTIEEWKELIYKEV 351
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 190/218 (87%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ +G+GA A+DT NVA+KKLSRPFQN THAKRAYRE L+K VNHK
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVI M+LDHERMSYLLYQMLCGIKHLH
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 141
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA T FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGE+++G V+F GTDHIDQWNK+I ++
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 239
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP+KRISVD+AL HPYI VW+D AE AP P YD ++EREH +++WKELIY+E+
Sbjct: 299 MLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEV 358
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 366 bits (940), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 190/218 (87%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANL QVIQM+LDHERMSYLLYQML GIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 360
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 190/218 (87%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANL QVIQM+LDHERMSYLLYQML GIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 360
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 190/218 (87%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ N +G+GA AYD +NVAIKKLSRPFQN THAKRAYRE LMK VNHK
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANL QVIQM+LDHERMSYLLYQML GIKHLH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 136
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSD TLKILDFGLARTAGT+FMMTPYVVTRYYRAPEVILGMGYK
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
ENVDIWSVGCIMGEM+R +LFPG D+IDQWNK+I ++
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP KRISVDDAL HPYINVW+D AEV AP P YD +DEREHT+++WKELIY+E+
Sbjct: 294 MLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 353
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 188/218 (86%), Gaps = 6/218 (2%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
K+ +G+GA A+DT NVA+KKLSRPFQN THAKRAYRE L+K VNHK
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH 181
NII LLN FTPQK+LEEFQDVYLVMELMDANLCQVI M+LDHERMSYLLYQMLCGIKHLH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA T FMMTPYVVTRYYRAPEVILGMGY
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
NVDIWSVGCIMGE+++G V+F GTDHIDQWNK+I ++
Sbjct: 204 ANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQL 241
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLVIDP+KRISVD+AL HPYI VW+D AE AP P YD ++EREH +++WKELIY+E+
Sbjct: 301 MLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEV 360
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 243 bits (621), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLN 203
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSSESRDLLIDEWKSLTYDEV 352
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 243 bits (620), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLN 203
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 352
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 243 bits (620), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 243 bits (620), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLN 203
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S++ R+ +D+WK L Y E+
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSLESRDLLIDEWKSLTYDEV 352
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 243 bits (620), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 243 bits (620), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 202
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 294 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 351
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVIL- 236
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 237 GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P P D S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPQDQSFESRDLLIDEWKSLTYDEV 345
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P P D S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPRDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 203
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 352
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 192
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 284 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 341
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 192
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 284 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 341
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 216
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 308 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 365
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P P+D S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPFDQSFESRDLLIDEWKSLTYDEV 345
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 215
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 307 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 364
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 201
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 293 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 350
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 18 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 137
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 195
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 235
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 287 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 344
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P P D S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPTDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 198
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 290 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 347
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 198
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 290 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 347
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 198
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 290 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 347
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 201
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 293 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 350
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 202
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 294 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 351
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 207
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 299 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 356
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 208
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 300 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 357
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 208
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 300 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 357
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 242 bits (618), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 202
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 294 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 351
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 98 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 157
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 215
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 307 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 364
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 216
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 308 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 365
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 193
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 285 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 342
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 193
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 285 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 342
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 192
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 284 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 341
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N + +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 29 EVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 148
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 206
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 246
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 298 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 355
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 219
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 311 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 368
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 241 bits (616), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 194
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 234
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 286 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 343
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 241 bits (615), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILD+GLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 241 bits (614), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 159/220 (72%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLS+PFQ++ HAKR YRE +L+K +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 91 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 150
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 208
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 300 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 357
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 161
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T M YV TR+YRAPE++L
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVATRWYRAPEIMLN 219
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 311 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 368
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 240 bits (612), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T M +V TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 240 bits (612), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T M +V TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 239 bits (611), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDF LAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 239 bits (611), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T M +V TR+YRAPE++L
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVATRWYRAPEIMLN 192
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 284 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 341
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 239 bits (611), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKIL FGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 155/209 (74%), Gaps = 10/209 (4%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
+G+GA AYD +Q VA+KKLSRPFQ++ HA+R YRE +L+K + H+N+IGLL+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHR 188
FTP S+E+F +VYLV LM A+L +++ L E + +L+YQ+L G+K++HSAGIIHR
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 147
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 247
DLKPSN+ V DC L+ILDFGLAR A MT YV TR+YRAPE++L M Y + VDIW
Sbjct: 148 DLKPSNVAVNEDCELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 248 SVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
SVGCIM E+++G LFPG+D+IDQ +I+
Sbjct: 206 SVGCIMAELLQGKALFPGSDYIDQLKRIM 234
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D ++R+S +AL H Y + + D + P PYD SV+ +E T+++WKEL YQE+
Sbjct: 286 MLVLDSDQRVSAAEALAHAYFSQYHDPED--EPEAEPYDESVEAKERTLEEWKELTYQEV 343
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILD GLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T MT V TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILD GLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 239 bits (609), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 24 EVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 201
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 293 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 350
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 140
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 198
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 290 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 347
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 202
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 294 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 351
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILD GLAR T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 345
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 201
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 293 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 350
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 238 bits (607), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 158/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 90 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGLAR T MT YV TR+YRAPE++L
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVATRWYRAPEIMLN 207
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 299 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 356
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 153/219 (69%), Gaps = 9/219 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ K + +H+G+GA A D + + VAIKKLSRPFQ+ AKRAYRE L+K +
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 98
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIK 178
H+N+IGLL+ FTP SL F D YLVM M +L +++ M+ E++ YL+YQML G+K
Sbjct: 99 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLK 158
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG- 237
++HSAG++HRDLKP N+ V DC LKILDFGLAR A MT YVVTR+YRAPEVIL
Sbjct: 159 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSW 216
Query: 238 MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM EM+ G LF G D++DQ +I+
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
ML +D +KR++ AL HP+ F D E A P+D S++ + TVD+WK+ IY+E+
Sbjct: 307 MLELDVDKRLTAAQALTHPFFEP-FRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEI 365
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 157/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 99 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 158
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V DC LKILDFGLAR T M V TR+YRAPE++L
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVATRWYRAPEIMLN 216
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S + R+ +D+WK L Y E+
Sbjct: 308 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSFESRDLLIDEWKSLTYDEV 365
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 157/220 (71%), Gaps = 10/220 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ ++ N S +G+GA A+DT T VA+KKLSRPFQ++ HAKR YRE +L+K +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGI 177
H+N+IGLL+ FTP +SLEEF DVYLV LM A+L +++ L + + +L+YQ+L G+
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG 237
K++HSA IIHRDLKPSN+ V D LKILDFGL R T MT YV TR+YRAPE++L
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVATRWYRAPEIMLN 196
Query: 238 -MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM E++ G LFPGTDHIDQ I+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ AL H Y + D + P PYD S++ R+ +D+WK L Y E+
Sbjct: 288 MLVLDSDKRITAAQALAHAYFAQYHDPDD--EPVADPYDQSLESRDLLIDEWKSLTYDEV 345
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 154/209 (73%), Gaps = 10/209 (4%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
+G+GA AYD +Q VA+KKLSRPFQ++ HA+R YRE +L+K + H+N+IGLL+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHR 188
FTP S+E+F +VYLV LM A+L +++ L E + +L+YQ+L G+K++HSAGIIHR
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 155
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 247
DLKPSN+ V D L+ILDFGLAR A MT YV TR+YRAPE++L M Y + VDIW
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 248 SVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
SVGCIM E+++G LFPG+D+IDQ +I+
Sbjct: 214 SVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D ++R+S +AL H Y + + D + P PYD SV+ +E T+++WKEL YQE+
Sbjct: 294 MLVLDSDQRVSAAEALAHAYFSQYHDPED--EPEAEPYDESVEAKERTLEEWKELTYQEV 351
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 152/219 (69%), Gaps = 9/219 (4%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
++ K + +H+G+GA A D + + VAIKKLSRPFQ+ AKRAYRE L+K +
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 80
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIK 178
H+N+IGLL+ FTP SL F D YLVM M +L +++ + E++ YL+YQML G+K
Sbjct: 81 QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLK 140
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG- 237
++HSAG++HRDLKP N+ V DC LKILDFGLAR A MT YVVTR+YRAPEVIL
Sbjct: 141 YIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSW 198
Query: 238 MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
M Y + VDIWSVGCIM EM+ G LF G D++DQ +I+
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
ML +D +KR++ AL HP+ F D E A P+D S++ + TVD+WK+ IY+E+
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEP-FRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEI 347
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 154/209 (73%), Gaps = 10/209 (4%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
+G+GA AYD +Q VA+KKLSRPFQ++ HA+R YRE +L+K + H+N+IGLL+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHR 188
FTP S+E+F +VYLV LM A+L +++ L E + +L+YQ+L G+K++HSAGIIHR
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHR 155
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 247
DLKPSN+ V D L+ILDFGLAR A MT YV TR+YRAPE++L M Y + VDIW
Sbjct: 156 DLKPSNVAVNEDSELRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 248 SVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
SVGCIM E+++G LFPG+D+IDQ +I+
Sbjct: 214 SVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D ++R+S +AL H Y + + D + P PYD SV+ +E T+++WKEL YQE+
Sbjct: 294 MLVLDSDQRVSAAEALAHAYFSQYHDPED--EPEAEPYDESVEAKERTLEEWKELTYQEV 351
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/245 (49%), Positives = 162/245 (66%), Gaps = 4/245 (1%)
Query: 34 APGPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIK 93
A P+ S ER Q E+P +Q + ++ ++YD + +A+K
Sbjct: 23 AAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK 82
Query: 94 KLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANL 153
KLSRPFQ++ HAKR YRE +L+K + H+N+IGLL+ FTP SLEEF DVYLV LM A+L
Sbjct: 83 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADL 142
Query: 154 CQVIQ-MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
+++ L + + +L+YQ+L G+K++HSA IIHRDLKPSN+ V DC LKILDFGLAR
Sbjct: 143 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
Query: 213 TAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQ 271
T MT YV TR+YRAPE++L M Y VDIWSVGCIM E++ G LFPGTDHI+Q
Sbjct: 203 --HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQ 260
Query: 272 WNKII 276
+I+
Sbjct: 261 LQQIM 265
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D +KRI+ +AL HPY + + D + P PYD S + R+ +++WK L Y+E+
Sbjct: 317 MLVLDTDKRITASEALAHPYFSQYHDPDD--EPESEPYDQSFESRQLEIEEWKRLTYEEV 374
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 150/209 (71%), Gaps = 10/209 (4%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
+G+GA A D T VAIKKL RPFQ+ AKRAYRE +L+K + H+N+IGLL+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHR 188
FTP ++L++F D YLVM M +L ++++ + L +R+ +L+YQML G++++H+AGIIHR
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHR 152
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIW 247
DLKP N+ V DC LKILDFGLAR A + M VVTR+YRAPEVIL M Y + VDIW
Sbjct: 153 DLKPGNLAVNEDCELKILDFGLARQADSE--MXGXVVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 248 SVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
SVGCIM EMI G LF G+DH+DQ +I+
Sbjct: 211 SVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
MLV+D E+R++ +AL HPY D + P YD S D+ + T+D+WK + Y+E+
Sbjct: 291 MLVLDAEQRVTAGEALAHPYFESLHDTED--EPQVQKYDDSFDDVDRTLDEWKRVTYKEV 348
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFR 81
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 82 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 352
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 79
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 350
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 29 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 87
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 88 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 146
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 147 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 250
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 301 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 358
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 79
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 350
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 81
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 82 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 352
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 191 bits (484), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 99
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 100 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 313 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 370
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 84
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 85 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 298 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 355
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 27 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 85
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 86 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 144
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 248
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 299 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 356
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 18 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 76
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 77 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 135
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 239
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 290 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 347
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 354
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 77
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 78 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 240
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 291 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 348
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLK 142
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 354
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 190 bits (483), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 19 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 77
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 78 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 136
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 240
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 291 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 348
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 150/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAI+K+S PF++ T+ +R RE K++
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLREIKILLRFR 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 354
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 187 bits (476), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 23 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFR 81
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 82 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 140
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 352
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 187 bits (475), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 148/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 41 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 99
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVYLV LM A+L ++++ L ++ + Y LYQ+L G+K
Sbjct: 100 HENIIGI-NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 313 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 370
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 187 bits (475), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 79
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 350
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 187 bits (475), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 79
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 350
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 187 bits (474), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 21 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 79
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 80 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 138
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 293 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 350
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 354
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 149/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLREIKILLRFR 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + LKI DFGLAR A T +T YV TR+YRAPE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 354
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 148/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 84 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 142
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T + V TR+YRAPE+
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 354
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 148/224 (66%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + N S++G GA AYD + VAIKK+S PF++ T+ +R RE K++
Sbjct: 26 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFR 84
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIK 178
H+NIIG+ N ++E+ +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 85 HENIIGI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLK 143
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T + V TR+YRAPE+
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDA-EVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI V+ AL HPY+ ++D + E A AP +D +D+ ++ KELI++E
Sbjct: 298 MLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPK--EKLKELIFEE 355
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 136/213 (63%), Gaps = 8/213 (3%)
Query: 72 NTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT 131
N ++ +A T Q VAIKK+ F VT+AKR RE K++K H NII + +
Sbjct: 64 NGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILR 123
Query: 132 PQKSLEEFQDVYLVMELMDANLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
P EF+ VY+V++LM+++L Q+I L E + Y LYQ+L G+K++HSA +IHRD
Sbjct: 124 PTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 183
Query: 190 LKPSNIVVKSDCTLKILDFGLARTAGTT-----FMMTPYVVTRYYRAPEVILGM-GYKEN 243
LKPSN++V +C LKI DFG+AR T+ + MT YV TR+YRAPE++L + Y +
Sbjct: 184 LKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA 243
Query: 244 VDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+D+WSVGCI GEM+ LFPG +++ Q I+
Sbjct: 244 IDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
ML +P RIS AL HP++ + D + AP P+D + D T ++ KE I E+
Sbjct: 328 MLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP-PFDFAFDREALTRERIKEAIVAEI 386
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 136/213 (63%), Gaps = 8/213 (3%)
Query: 72 NTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT 131
N ++ +A T Q VAIKK+ F VT+AKR RE K++K H NII + +
Sbjct: 65 NGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILR 124
Query: 132 PQKSLEEFQDVYLVMELMDANLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
P EF+ VY+V++LM+++L Q+I L E + Y LYQ+L G+K++HSA +IHRD
Sbjct: 125 PTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 184
Query: 190 LKPSNIVVKSDCTLKILDFGLARTAGTT-----FMMTPYVVTRYYRAPEVILGM-GYKEN 243
LKPSN++V +C LKI DFG+AR T+ + MT YV TR+YRAPE++L + Y +
Sbjct: 185 LKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA 244
Query: 244 VDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+D+WSVGCI GEM+ LFPG +++ Q I+
Sbjct: 245 IDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQEL 60
ML +P RIS AL HP++ + D + AP P+D + D T ++ KE I E+
Sbjct: 329 MLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP-PFDFAFDREALTRERIKEAIVAEI 387
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 181 bits (459), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 146/224 (65%), Gaps = 14/224 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+G + ++G GA AYD + VAIKK+S PF++ T+ +R RE +++
Sbjct: 41 VGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFR 99
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-MDLDHERMSYLLYQMLCGIK 178
H+N+IG+ + +LE +DVY+V +LM+ +L ++++ L ++ + Y LYQ+L G+K
Sbjct: 100 HENVIGIRDILR-ASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----TFMMTPYVVTRYYRAPEV 234
++HSA ++HRDLKPSN+++ + C LKI DFGLAR A T +T V TR+YRAPE+
Sbjct: 159 YIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 235 IL-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+L GY +++DIWSVGCI+ EM+ +FPG ++DQ N I+G
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
ML +P KRI+V++AL HPY+ ++D + A P+ +++ + ++ KELI+QE
Sbjct: 313 MLTFNPNKRITVEEALAHPYLEQYYDPTD-EPVAEEPFTFAMELDDLPKERLKELIFQE 370
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 140/233 (60%), Gaps = 35/233 (15%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLN 128
LG GA + D T + VA+KK+ FQN T A+R +RE ++ +L H+NI+ LLN
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIH 187
+DVYLV + M+ +L VI+ + L+ Y++YQ++ IK+LHS G++H
Sbjct: 77 VLRADND----RDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLH 132
Query: 188 RDLKPSNIVVKSDCTLKILDFGLART-----------------AGTTF-----MMTPYVV 225
RD+KPSNI++ ++C +K+ DFGL+R+ F ++T YV
Sbjct: 133 RDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVA 192
Query: 226 TRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
TR+YRAPE++LG Y + +D+WS+GCI+GE++ G +FPG+ ++Q +IIG
Sbjct: 193 TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 12/66 (18%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPY-DHSV-----DEREHTVDQWKE 54
+L +P KRIS +DAL HP+++++ H P P DH + D +H++D ++
Sbjct: 312 LLQFNPNKRISANDALKHPFVSIF------HNPNEEPNCDHIITIPINDNVKHSIDDYRN 365
Query: 55 LIYQEL 60
L+Y E+
Sbjct: 366 LVYSEI 371
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 126/233 (54%), Gaps = 21/233 (9%)
Query: 74 SHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
S LG GA A T + VAIKK+ PF A R RE K++K H+NII +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIF 75
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGII 186
N P S E F +VY++ ELM +L +VI L + + Y +YQ L +K LH + +I
Sbjct: 76 NIQRPD-SFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLAR-----------TAGTTFMMTPYVVTRYYRAPEVI 235
HRDLKPSN+++ S+C LK+ DFGLAR G MT YV TR+YRAPEV+
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVM 194
Query: 236 L-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHDKLD 287
L Y +D+WS GCI+ E+ +FPG D+ Q I G + H D
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREH-----TVDQWKEL 55
MLV DP KRI+ +AL HPY+ + D + P P S E +H T K+L
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPND--EPEGEPIPPSFFEFDHYKEALTTKDLKKL 346
Query: 56 IYQEL 60
I+ E+
Sbjct: 347 IWNEI 351
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 125/233 (53%), Gaps = 21/233 (9%)
Query: 74 SHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
S LG GA A T + VAIKK+ PF A R RE K++K H+NII +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIF 75
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGII 186
N P S E F +VY++ ELM +L +VI L + + Y +YQ L +K LH + +I
Sbjct: 76 NIQRPD-SFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLAR-----------TAGTTFMMTPYVVTRYYRAPEVI 235
HRDLKPSN+++ S+C LK+ DFGLAR G MT V TR+YRAPEV+
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVM 194
Query: 236 L-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHDKLD 287
L Y +D+WS GCI+ E+ +FPG D+ Q I G + H D
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREH-----TVDQWKEL 55
MLV DP KRI+ +AL HPY+ + D + P P S E +H T K+L
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPND--EPEGEPIPPSFFEFDHYKEALTTKDLKKL 346
Query: 56 IYQEL 60
I+ E+
Sbjct: 347 IWNEI 351
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 155 bits (391), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 125/233 (53%), Gaps = 21/233 (9%)
Query: 74 SHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
S LG GA A T + VAIKK+ PF A R RE K++K H+NII +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIF 75
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGII 186
N P S E F +VY++ ELM +L +VI L + + Y +YQ L +K LH + +I
Sbjct: 76 NIQRPD-SFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLAR-----------TAGTTFMMTPYVVTRYYRAPEVI 235
HRDLKPSN+++ S+C LK+ DFGLAR G M +V TR+YRAPEV+
Sbjct: 135 HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVM 194
Query: 236 L-GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHDKLD 287
L Y +D+WS GCI+ E+ +FPG D+ Q I G + H D
Sbjct: 195 LTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREH-----TVDQWKEL 55
MLV DP KRI+ +AL HPY+ + D + P P S E +H T K+L
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPND--EPEGEPIPPSFFEFDHYKEALTTKDLKKL 346
Query: 56 IYQEL 60
I+ E+
Sbjct: 347 IWNEI 351
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 137/246 (55%), Gaps = 50/246 (20%)
Query: 70 RHNTSHL-GAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 122
R+ HL G G+ AYD ++ VAIKK+ R F+++ KR RE ++ +NH +
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 123 IIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHL 180
++ +L+ P K +E+F ++Y+V+E+ D++ ++ + L + LLY +L G+K++
Sbjct: 114 VVKVLDIVIP-KDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--------------------TTF-- 218
HSAGI+HRDLKP+N +V DC++K+ DFGLART TF
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 219 ------MMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMIR-----------GG 260
+T +VVTR+YRAPE+I L Y E +D+WS+GCI E++ G
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG 292
Query: 261 VLFPGT 266
LFPG+
Sbjct: 293 PLFPGS 298
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
MLV +P KRI++++ L HP+
Sbjct: 380 MLVFNPNKRITINECLAHPFF 400
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 31/222 (13%)
Query: 62 ISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
I H +G+ + +L AYD T++NVAIKK++R F+++ KR RE ++ +
Sbjct: 30 IKHLIGRGSYGYVYL----AYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKH 179
II L + P L +F ++Y+V+E+ D++L ++ + L E + +LY +L G
Sbjct: 86 YIIRLYDLIIPD-DLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----------------------- 216
+H +GIIHRDLKP+N ++ DC++K+ DFGLART +
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 217 TFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGEMI 257
+T +VVTR+YRAPE+I L Y +++DIWS GCI E++
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Score = 30.8 bits (68), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML +P KRI++D AL HPY+
Sbjct: 345 MLKFNPNKRITIDQALDHPYL 365
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 133/245 (54%), Gaps = 45/245 (18%)
Query: 62 ISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
I H +G+ + +L AYD +NVAIKK++R F+++ KR RE ++ +
Sbjct: 32 IKHLIGRGSYGYVYL----AYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ--MDLDHERMSYLLYQMLCGIKH 179
II L + P+ L +F ++Y+V+E+ D++L ++ + + L + + +LY +L G K
Sbjct: 88 YIIRLHDLIIPE-DLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT----------------------- 216
+H +GIIHRDLKP+N ++ DC++KI DFGLART +
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 217 ---TFMMTPYVVTRYYRAPEVI-LGMGYKENVDIWSVGCIMGE---MIRGGV-------- 261
+T +VVTR+YRAPE+I L Y ++DIWS GCI E M++ +
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 262 LFPGT 266
LFPG+
Sbjct: 267 LFPGS 271
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML + +KRI++D AL HPY+
Sbjct: 350 MLRFNAQKRITIDKALSHPYL 370
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 134 bits (336), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 113/206 (54%), Gaps = 13/206 (6%)
Query: 79 GAAYDTATQQN--VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSL 136
G Y Q VA+K++ ++ A RE L+K ++H NI+ L++ ++ L
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 137 EEFQDVYLVMELMDANLCQVI---QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
LV E M+ +L +V+ + L ++ LYQ+L G+ H H I+HRDLKP
Sbjct: 95 T------LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFM-MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 251
N+++ SD LK+ DFGLAR G T VVT +YRAP+V++G Y +VDIWS+GC
Sbjct: 149 NLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 252 IMGEMIRGGVLFPGTDHIDQWNKIIG 277
I EMI G LFPG DQ KI
Sbjct: 209 IFAEMITGKPLFPGVTDDDQLPKIFS 234
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML DP KRIS DA+ HPY
Sbjct: 284 MLCFDPNKRISARDAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 113/206 (54%), Gaps = 13/206 (6%)
Query: 79 GAAYDTATQQN--VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSL 136
G Y Q VA+K++ ++ A RE L+K ++H NI+ L++ ++ L
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 137 EEFQDVYLVMELMDANLCQVI---QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
LV E M+ +L +V+ + L ++ LYQ+L G+ H H I+HRDLKP
Sbjct: 95 T------LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQ 148
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFM-MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGC 251
N+++ SD LK+ DFGLAR G T VVT +YRAP+V++G Y +VDIWS+GC
Sbjct: 149 NLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
Query: 252 IMGEMIRGGVLFPGTDHIDQWNKIIG 277
I EMI G LFPG DQ KI
Sbjct: 209 IFAEMITGKPLFPGVTDDDQLPKIFS 234
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML DP KRIS DA+ HPY
Sbjct: 284 MLCFDPNKRISARDAMNHPYFK 305
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 132/243 (54%), Gaps = 27/243 (11%)
Query: 66 MGKKRHNTSHLGAG------AAYDTATQQNVAIKK--LSRPFQNVTHAKRAYREFKLMKL 117
+G + + LG G +A D + VAIKK L+ P Q+V HA RE K+++
Sbjct: 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKHA---LREIKIIRR 64
Query: 118 VNHKNIIGLLNAFTPQKS--------LEEFQDVYLVMELMDANLCQVI-QMDLDHERMSY 168
++H NI+ + P S L E VY+V E M+ +L V+ Q L E
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTTFM----MTPY 223
+YQ+L G+K++HSA ++HRDLKP+N+ + + D LKI DFGLAR + ++
Sbjct: 125 FMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG 184
Query: 224 VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREA 282
+VT++YR+P ++L Y + +D+W+ GCI EM+ G LF G ++Q I+ +
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244
Query: 283 HDK 285
H++
Sbjct: 245 HEE 247
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 102/178 (57%), Gaps = 9/178 (5%)
Query: 105 AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEE--FQDVYLVMELMDANLCQVI---QM 159
KR RE +L+ +H NI+GL + F EE +YLV ELM +L QVI ++
Sbjct: 73 CKRVLREIRLLNHFHHPNILGLRDIFV---HFEEPAMHKLYLVTELMRTDLAQVIHDQRI 129
Query: 160 DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFM 219
+ + + Y +Y +L G+ LH AG++HRDL P NI++ + + I DF LAR
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 220 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
T YV R+YRAPE+++ G+ + VD+WS GC+M EM LF G+ +Q NKI+
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFD 26
ML +P++RIS + AL HPY FD
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFD 325
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 102/178 (57%), Gaps = 9/178 (5%)
Query: 105 AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEE--FQDVYLVMELMDANLCQVI---QM 159
KR RE +L+ +H NI+GL + F EE +YLV ELM +L QVI ++
Sbjct: 73 CKRVLREIRLLNHFHHPNILGLRDIFV---HFEEPAMHKLYLVTELMRTDLAQVIHDQRI 129
Query: 160 DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFM 219
+ + + Y +Y +L G+ LH AG++HRDL P NI++ + + I DF LAR
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 220 MTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
T YV R+YRAPE+++ G+ + VD+WS GC+M EM LF G+ +Q NKI+
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFD 26
ML +P++RIS + AL HPY FD
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFD 325
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 20/236 (8%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
Q +K N +G G+ + T + VAIKK + K A RE KL+K +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLC 175
H+N++ LL +K YLV E +D + +++ LD++ + L+Q++
Sbjct: 82 RHENLVNLLEVCKKKKRW------YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTTFMMTPYVVTRYYRAPEV 234
GI HS IIHRD+KP NI+V +K+ DFG ART A + V TR+YRAPE+
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 235 ILG-MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI---IGKMREAHDKL 286
++G + Y + VD+W++GC++ EM G LFPG IDQ I +G + H +L
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL 251
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 29 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 84
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 85 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLG 198
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 199 CIFAEMVTRRALFPGDSEIDQLFRIF 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLSFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 26 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 81
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 82 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 135
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 196 CIFAEMVTRRALFPGDSEIDQLFRIF 221
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 10/47 (21%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFDDAEVHAPAPGPYDHSVDEREH 47
ML DP KRIS AL HP+ +V P P H ER H
Sbjct: 271 MLHYDPNKRISAKAALAHPFFQ------DVTKPVP----HLRLERPH 307
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 76
Query: 141 DVYLVME--------LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 77 --YLVFEHVHQDLKTFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 76
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 77 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 76
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 77 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 29 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 84
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 85 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 198
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 199 CIFAEMVTRRALFPGDSEIDQLFRIF 224
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 78
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 79 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 193 CIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKDFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 78
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 79 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 193 CIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 79
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 80 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 134 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 194 CIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 79
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 80 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 194 CIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 78
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 79 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 193 CIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 76
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 77 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 80
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 81 --YLVFEFLSMDLKDFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 80
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 81 --YLVFEFLSMDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 135 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 78
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 79 --YLVFEFLSMDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 193 CIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 21 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 76
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 77 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 80
Query: 141 DVYLVME--------LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 81 --YLVFEHVDQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 79
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 80 --YLVFEFLSMDLKDFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 194 CIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 80
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 81 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 24 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 79
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 80 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 133
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 194 CIFAEMVTRRALFPGDSEIDQLFRIF 219
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 26 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 81
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 82 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 135
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 196 CIFAEMVTRRALFPGDSEIDQLFRIF 221
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 23 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 78
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 79 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 193 CIFAEMVTRRALFPGDSEIDQLFRIF 218
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 80
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 81 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 25 ARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 80
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 81 --YLVFEFLHQDLKTFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G + VVT +YRAPE++LG Y VDIWS+G
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 195 CIFAEMVTRRALFPGDSEIDQLFRIF 220
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+ K+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 22 ARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 77
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 78 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 131
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 192 CIFAEMVTRRALFPGDSEIDQLFRIF 217
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 20/206 (9%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+ K+ + A RE L+K +NH NI+ LL+ + L
Sbjct: 21 ARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL---- 76
Query: 141 DVYLVMEL--------MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
YLV E MDA+ I + L + L+Q+L G+ HS ++HRDLKP
Sbjct: 77 --YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKP 130
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMGYKEN-VDIWSVG 250
N+++ ++ +K+ DFGLAR G T VVT +YRAPE++LG Y VDIWS+G
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI EM+ LFPG IDQ +I
Sbjct: 191 CIFAEMVTRRALFPGDSEIDQLFRIF 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 66 MGKKRHN-TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
M R+ + +G GA A D + VA+K + P RE L++ +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 119 N---HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLY 171
H N++ L++ ++ E + V LV E +D +L + L E + L+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRA 231
Q L G+ LH+ I+HRDLKP NI+V S T+K+ DFGLAR + P VVT +YRA
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRA 179
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
PEV+L Y VD+WSVGCI EM R LF G DQ KI
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 61 PISHQMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAK---RAYRE 111
P+ + + +G GA A D + VA+K + P RE
Sbjct: 2 PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE 61
Query: 112 FKLMKLVN---HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHE 164
L++ + H N++ L++ ++ E + V LV E +D +L + L E
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
+ L+ Q L G+ LH+ I+HRDLKP NI+V S T+K+ DFGLAR +TP V
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVV 180
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
VT +YRAPEV+L Y VD+WSVGCI EM R LF G DQ KI
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 66 MGKKRHN-TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
M R+ + +G GA A D + VA+K + P RE L++ +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 119 N---HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLY 171
H N++ L++ ++ E + V LV E +D +L + L E + L+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRA 231
Q L G+ LH+ I+HRDLKP NI+V S T+K+ DFGLAR + P VVT +YRA
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRA 179
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
PEV+L Y VD+WSVGCI EM R LF G DQ KI
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 66 MGKKRHN-TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV 118
M R+ + +G GA A D + VA+K + P RE L++ +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 119 N---HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLY 171
H N++ L++ ++ E + V LV E +D +L + L E + L+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRA 231
Q L G+ LH+ I+HRDLKP NI+V S T+K+ DFGLAR + P VVT +YRA
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
PEV+L Y VD+WSVGCI EM R LF G DQ KI
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLC----QVIQMDLDHERMSYLL 170
++ H N++ L + T ++ E + + LV E +D +L +V + + E + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYR 230
+Q+L G+ LHS ++HRDLKP NI+V S +K+ DFGLAR +T VVT +YR
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
APEV+L Y VD+WSVGCI EM R LF G+ +DQ KI+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLC----QVIQMDLDHERMSYLL 170
++ H N++ L + T ++ E + + LV E +D +L +V + + E + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYR 230
+Q+L G+ LHS ++HRDLKP NI+V S +K+ DFGLAR +T VVT +YR
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
APEV+L Y VD+WSVGCI EM R LF G+ +DQ KI+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLC----QVIQMDLDHERMSYLL 170
++ H N++ L + T ++ E + + LV E +D +L +V + + E + ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYR 230
+Q+L G+ LHS ++HRDLKP NI+V S +K+ DFGLAR +T VVT +YR
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYR 186
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
APEV+L Y VD+WSVGCI EM R LF G+ +DQ KI+
Sbjct: 187 APEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 68 KKRHNTSHLGAGAAYDTATQQN-----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 122
+K H +G G QN A+KK+ ++ RE ++K + H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 123 IIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKH 179
I+ L + +K L LV E +D +L +++ + L+ L Q+L GI +
Sbjct: 62 IVKLYDVIHTKKRL------VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFM-MTPYVVTRYYRAPEVILGM 238
H ++HRDLKP N+++ + LKI DFGLAR G T VVT +YRAP+V++G
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 239 -GYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
Y +DIWSVGCI EM+ G LFPG DQ +I
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 20/224 (8%)
Query: 67 GKKRHNTSHLGAG------AAYDTATQQNVAIKKLS---RPFQNVTHAKRAYREFKLMKL 117
K+ LG G A D T Q VAIKK+ R + A RE KL++
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ---MDLDHERMSYLLYQML 174
++H NIIGLL+AF KS ++ LV + M+ +L +I+ + L + + L
Sbjct: 69 LSHPNIIGLLDAFG-HKS-----NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY-VVTRYYRAPE 233
G+++LH I+HRDLKP+N+++ + LK+ DFGLA++ G+ + VVTR+YRAPE
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPE 182
Query: 234 VILGMG-YKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
++ G Y VD+W+VGCI+ E++ PG +DQ +I
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 226
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 68 KKRHNTSHLGAGAAYDTATQQN-----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 122
+K H +G G QN A+KK+ ++ RE ++K + H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 123 IIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKH 179
I+ L + +K L LV E +D +L +++ + L+ L Q+L GI +
Sbjct: 62 IVKLYDVIHTKKRL------VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFM-MTPYVVTRYYRAPEVILGM 238
H ++HRDLKP N+++ + LKI DFGLAR G T VVT +YRAP+V++G
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 239 -GYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
Y +DIWSVGCI EM+ G LFPG DQ +I
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 68 KKRHNTSHLGAGAAYDTATQQN-----VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN 122
+K H +G G QN A+KK+ ++ RE ++K + H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 123 IIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKH 179
I+ L + +K L LV E +D +L +++ + L+ L Q+L GI +
Sbjct: 62 IVKLYDVIHTKKRL------VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFM-MTPYVVTRYYRAPEVILGM 238
H ++HRDLKP N+++ + LKI DFGLAR G T +VT +YRAP+V++G
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 239 -GYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
Y +DIWSVGCI EM+ G LFPG DQ +I
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 115/224 (51%), Gaps = 7/224 (3%)
Query: 68 KKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
+K N ++ + T VA+K++ + T + A RE LMK + H+NI+ L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPST-AIREISLMKELKHENIVRLY 69
Query: 128 NAFTPQKSLE---EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG 184
+ + L EF D L + MD+ L+ + Y +Q+L G+ H
Sbjct: 70 DVIHTENKLTLVFEFMDNDL-KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128
Query: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILG-MGYKE 242
I+HRDLKP N+++ LK+ DFGLAR G + VVT +YRAP+V++G Y
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST 188
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHDKL 286
++DIWS GCI+ EMI G LFPGT+ +Q I M ++ L
Sbjct: 189 SIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 27/257 (10%)
Query: 29 EVHAPAPGPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQ 88
E PG S ++D+++ + ++G+ + + A DT T +
Sbjct: 13 EAQTQGPGSMSVSAAPSATSIDRYRRIT--------KLGEGTYGEVY----KAIDTVTNE 60
Query: 89 NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
VAIK++ + A RE L+K + H+NII L + + ++L+ E
Sbjct: 61 TVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL------KSVIHHNHRLHLIFEY 114
Query: 149 MDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SDCT--- 202
+ +L + + D+ + LYQ++ G+ HS +HRDLKP N+++ SD +
Sbjct: 115 AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETP 174
Query: 203 -LKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRG 259
LKI DFGLAR G T ++T +YR PE++LG Y +VDIWS+ CI EM+
Sbjct: 175 VLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMK 234
Query: 260 GVLFPGTDHIDQWNKII 276
LFPG IDQ KI
Sbjct: 235 TPLFPGDSEIDQLFKIF 251
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML +DP KRIS +AL HPY +
Sbjct: 302 MLEMDPVKRISAKNALEHPYFS 323
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 12/202 (5%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+K++ + A RE L+K + HKNI+ L + K L
Sbjct: 21 AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT--- 77
Query: 141 DVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
LV E D +L + DLD E + L+Q+L G+ HS ++HRDLKP N+++
Sbjct: 78 ---LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 134
Query: 198 KSDCTLKILDFGLARTAGTTFMM-TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGE 255
+ LK+ +FGLAR G + VVT +YR P+V+ G Y ++D+WS GCI E
Sbjct: 135 NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194
Query: 256 MIRGG-VLFPGTDHIDQWNKII 276
+ G LFPG D DQ +I
Sbjct: 195 LANAGRPLFPGNDVDDQLKRIF 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 12/202 (5%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+K++ + A RE L+K + HKNI+ L + K L
Sbjct: 21 AKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT--- 77
Query: 141 DVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
LV E D +L + DLD E + L+Q+L G+ HS ++HRDLKP N+++
Sbjct: 78 ---LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI 134
Query: 198 KSDCTLKILDFGLARTAGTTF-MMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGE 255
+ LK+ DFGLAR G + VVT +YR P+V+ G Y ++D+WS GCI E
Sbjct: 135 NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194
Query: 256 MIRGG-VLFPGTDHIDQWNKII 276
+ LFPG D DQ +I
Sbjct: 195 LANAARPLFPGNDVDDQLKRIF 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 108/201 (53%), Gaps = 26/201 (12%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIKK+ + F+N RE ++M++V H N++ L F ++ + LV+E
Sbjct: 67 VAIKKVLQDKRFKN--------RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118
Query: 148 LMD----------ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
+ A L Q + M L + +YQ+L + ++HS GI HRD+KP N+++
Sbjct: 119 YVPETVYRASRHYAKLKQTMPMLL----IKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174
Query: 198 KSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGE 255
LK++DFG A+ + +RYYRAPE+I G Y N+DIWS GC+M E
Sbjct: 175 DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE 234
Query: 256 MIRGGVLFPGTDHIDQWNKII 276
+++G LFPG IDQ +II
Sbjct: 235 LMQGQPLFPGESGIDQLVEII 255
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 52/250 (20%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG G+ +D + + A+KK+ + + RE +MK+++H NII L++
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 130 F---------TPQKS---------------------LEEFQDVYL--VMELMDANLCQVI 157
F PQ + Q+ YL +ME + L +V+
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 158 QMDLDHER------MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGL 210
+ + R +S +YQ+ + +HS GI HRD+KP N++V S D TLK+ DFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Query: 211 ARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
A+ + + +R+YRAPE++LG Y ++D+WS+GC+ GE+I G LF G I
Sbjct: 189 AKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI 248
Query: 270 DQWNKIIGKM 279
DQ +II M
Sbjct: 249 DQLVRIIQIM 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 20/235 (8%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
M +K +G G+ + T Q VAIKK + K A RE +++K +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVI---QMDLDHERMSYLLYQMLCG 176
H N++ LL F ++ L +LV E D + + Q + + + +Q L
Sbjct: 61 HPNLVNLLEVFRRKRRL------HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQA 114
Query: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPYVVTRYYRAPEVI 235
+ H IHRD+KP NI++ +K+ DFG AR G + V TR+YR+PE++
Sbjct: 115 VNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
Query: 236 LG-MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQW---NKIIGKMREAHDKL 286
+G Y VD+W++GC+ E++ G L+PG +DQ K +G + H ++
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 48 VAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 97
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 157
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 218 LGQPIFPGDSGVDQLVEII 236
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 48 VAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 97
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 157
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 218 LGQPIFPGDSGVDQLVEII 236
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 82 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 131
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 191
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 192 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 252 LGQPIFPGDSGVDQLVEII 270
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 76 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 125
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 126 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 185
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 186 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 246 LGQPIFPGDSGVDQLVEII 264
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 84 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 133
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 134 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 193
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 194 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 254 LGQPIFPGDSGVDQLVEII 272
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 53 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 102
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 103 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 162
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 163 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 223 LGQPIFPGDSGVDQLVEII 241
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 86 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 135
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 136 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 195
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 196 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 256 LGQPIFPGDSGVDQLVEII 274
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 127 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 176
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 177 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 236
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 237 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 297 LGQPIFPGDSGVDQLVEII 315
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 61 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 110
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 111 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 170
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 171 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 231 LGQPIFPGDSGVDQLVEII 249
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 48 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 97
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 157
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ Y+ +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 218 LGQPIFPGDSGVDQLVEII 236
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 48 VAIKKVLQGKAFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 97
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + A + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 98 LDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 157
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 218 LGQPIFPGDSGVDQLVEII 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAIK +S+ + A+ A E +++K +NH
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 74 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 233 EVILGM---GYKENVDIWSVGCIMGEMIRG 259
EV++ + GY VD WS+G I+ + G
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
+LV+DP+ R + ++AL HP++
Sbjct: 257 LLVVDPKARFTTEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAIK +S+ + A+ A E +++K +NH
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 75 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 233 EVILGM---GYKENVDIWSVGCIMGEMIRG 259
EV++ + GY VD WS+G I+ + G
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
+LV+DP+ R + ++AL HP++
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAIK +S+ + A+ A E +++K +NH
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 75 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 233 EVILGM---GYKENVDIWSVGCIMGEMIRG 259
EV++ + GY VD WS+G I+ + G
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
+LV+DP+ R + ++AL HP++
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAIK +S+ + A+ A E +++K +NH
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 75 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 233 EVILGM---GYKENVDIWSVGCIMGEMIRG 259
EV++ + GY VD WS+G I+ + G
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
+LV+DP+ R + ++AL HP++
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 32/204 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAIK +S+ + A+ A E +++K +NH
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 81 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 233 EVILGM---GYKENVDIWSVGCIM 253
EV++ + GY VD WS+G I+
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVIL 215
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
+LV+DP+ R + ++AL HP++
Sbjct: 264 LLVVDPKARFTTEEALRHPWLQ 285
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ---MDLDHE 164
A RE L+K + H NI+ L + +KSL LV E +D +L Q + ++
Sbjct: 47 AIREVSLLKDLKHANIVTLHDIIHTEKSLT------LVFEYLDKDLKQYLDDCGNIINMH 100
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-TFMMTPY 223
+ L+Q+L G+ + H ++HRDLKP N+++ LK+ DFGLAR T
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE 160
Query: 224 VVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
VVT +YR P+++LG Y +D+W VGCI EM G LFPG+
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 82 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 131
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 191
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 192 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 252 LGQPIFPGDSGVDQLVEII 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAI+ +S+ + A+ A E +++K +NH
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 200 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 233 EVILGM---GYKENVDIWSVGCIMGEMIRG 259
EV++ + GY VD WS+G I+ + G
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV+DP+ R + ++AL HP++
Sbjct: 383 LLVVDPKARFTTEEALRHPWL 403
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 60 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 109
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 110 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 169
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 170 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 230 LGQPIFPGDSGVDQLVEII 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 32/210 (15%)
Query: 73 TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA------YREFKLMKLVNH 120
+ LG+GA A++ T + VAI+ +S+ + A+ A E +++K +NH
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 121 KNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS-----YLLYQMLC 175
II + N F + +D Y+V+ELM+ ++ + ++R+ YQML
Sbjct: 214 PCIIKIKNFF-------DAEDYYIVLELMEGG--ELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+++LH GIIHRDLKP N+++ S DC +KI DFG ++ G T +M T Y AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 233 EVILGM---GYKENVDIWSVGCIMGEMIRG 259
EV++ + GY VD WS+G I+ + G
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV+DP+ R + ++AL HP++
Sbjct: 397 LLVVDPKARFTTEEALRHPWL 417
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 56 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 105
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 106 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 165
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 166 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 226 LGQPIFPGDSGVDQLVEII 244
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 67 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 116
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 117 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 176
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 177 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 237 LGQPIFPGDSGVDQLVEII 255
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 60 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 109
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 110 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 169
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 170 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 230 LGQPIFPGDSGVDQLVEII 248
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 48 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 97
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 157
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 218 LGQPIFPGDSGVDQLVEII 236
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 48 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 97
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 98 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 157
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 218 LGQPIFPGDSGVDQLVEII 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 52 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 101
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 102 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 161
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 162 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 222 LGQPIFPGDSGVDQLVEII 240
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 22/199 (11%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL--V 145
VAIKK+ + F+N RE ++M+ ++H NI+ L F S E+ +VYL V
Sbjct: 49 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFF--YSSGEKKDEVYLNLV 98
Query: 146 MELMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
++ + + +V + L + +YQ+ + ++HS GI HRD+KP N+++
Sbjct: 99 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 158
Query: 200 D-CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI 257
D LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++
Sbjct: 159 DTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
Query: 258 RGGVLFPGTDHIDQWNKII 276
G +FPG +DQ +II
Sbjct: 219 LGQPIFPGDSGVDQLVEII 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 18/197 (9%)
Query: 90 VAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIKK+ + F+N RE ++M+ ++H NI+ L F ++ + LV++
Sbjct: 48 VAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLD 99
Query: 148 LMDANLCQVI------QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD- 200
+ + +V + L + +YQ+ + ++HS GI HRD+KP N+++ D
Sbjct: 100 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT 159
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRG 259
LK+ DFG A+ + +RYYRAPE+I G Y ++D+WS GC++ E++ G
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
Query: 260 GVLFPGTDHIDQWNKII 276
+FPG +DQ +II
Sbjct: 220 QPIFPGDSGVDQLVEII 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 83 DTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQD 141
D T Q A+K +S R + T + RE +L+K ++H NI+ L F + +
Sbjct: 70 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 129
Query: 142 VYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-- 199
VY EL D + + ++D R ++ Q+L GI ++H I+HRDLKP N++++S
Sbjct: 130 VYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 186
Query: 200 -DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
D ++I+DFGL+ + M + T YY APEV+ G Y E D+WS G I+ ++
Sbjct: 187 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 245
Query: 259 GGVLFPGTDHIDQWNKI 275
G F G + D K+
Sbjct: 246 GCPPFNGANEYDILKKV 262
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 20/227 (8%)
Query: 62 ISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
+ G+ T LG + +T +VAIKK+ Q+ R + + + +++H
Sbjct: 27 VERMAGQGTFGTVQLGK----EKSTGMSVAIKKV---IQDPRFRNRELQIMQDLAVLHHP 79
Query: 122 NIIGLLNAFTPQKSLEEFQDVYL--VMELMDANLCQVI------QMDLDHERMSYLLYQM 173
NI+ L + F + +D+YL VME + L + Q+ + L+Q+
Sbjct: 80 NIVQLQSYFYTLGERDR-RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 174 L--CGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYR 230
+ G HL S + HRD+KP N++V ++D TLK+ DFG A+ + Y+ +RYYR
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYR 198
Query: 231 APEVILG-MGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
APE+I G Y VDIWSVGCI EM+ G +F G + Q ++I+
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 83 DTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQD 141
D T Q A+K +S R + T + RE +L+K ++H NI+ L F + +
Sbjct: 47 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106
Query: 142 VYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-- 199
VY EL D + + ++D R ++ Q+L GI ++H I+HRDLKP N++++S
Sbjct: 107 VYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 163
Query: 200 -DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
D ++I+DFGL+ + M + T YY APEV+ G Y E D+WS G I+ ++
Sbjct: 164 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 259 GGVLFPGTDHIDQWNKI 275
G F G + D K+
Sbjct: 223 GCPPFNGANEYDILKKV 239
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 83 DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
D TQQ A+K +++ RE +L+K ++H NI+ L S ++
Sbjct: 43 DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102
Query: 143 YLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--- 199
Y EL D + + + D R ++ Q+ GI ++H I+HRDLKP NI+++S
Sbjct: 103 YTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 200 DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
DC +KI+DFGL+ M + T YY APEV+ G Y E D+WS G I+ ++ G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
Query: 260 GVLFPGTDHIDQWNKI 275
F G + D ++
Sbjct: 219 TPPFYGKNEYDILKRV 234
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 83 DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
D TQQ A+K +++ RE +L+K ++H NI+ L S ++
Sbjct: 43 DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102
Query: 143 YLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--- 199
Y EL D + + + D R ++ Q+ GI ++H I+HRDLKP NI+++S
Sbjct: 103 YTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 200 DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
DC +KI+DFGL+ M + T YY APEV+ G Y E D+WS G I+ ++ G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
Query: 260 GVLFPGTDHIDQWNKI 275
F G + D ++
Sbjct: 219 TPPFYGKNEYDILKRV 234
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 83 DTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQD 141
D T Q A+K +S R + T + RE +L+K ++H NI+ L F + +
Sbjct: 71 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 130
Query: 142 VYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-- 199
VY EL D + + ++D R ++ Q+L GI ++H I+HRDLKP N++++S
Sbjct: 131 VYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 187
Query: 200 -DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
D ++I+DFGL+ + M + T YY APEV+ G Y E D+WS G I+ ++
Sbjct: 188 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 246
Query: 259 GGVLFPGTDHIDQWNKI 275
G F G + D K+
Sbjct: 247 GCPPFNGANEYDILKKV 263
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 83 DTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQD 141
D T Q A+K +S R + T + RE +L+K ++H NI+ L F + +
Sbjct: 53 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 112
Query: 142 VYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-- 199
VY EL D + + ++D R ++ Q+L GI ++H I+HRDLKP N++++S
Sbjct: 113 VYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 169
Query: 200 -DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
D ++I+DFGL+ + M + T YY APEV+ G Y E D+WS G I+ ++
Sbjct: 170 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 228
Query: 259 GGVLFPGTDHIDQWNKI 275
G F G + D K+
Sbjct: 229 GCPPFNGANEYDILKKV 245
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 83 DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
D TQQ A+K +++ RE +L+K ++H NI+ L S ++
Sbjct: 43 DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102
Query: 143 YLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--- 199
Y EL D + + + D R ++ Q+ GI ++H I+HRDLKP NI+++S
Sbjct: 103 YTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 200 DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
DC +KI+DFGL+ M + T YY APEV+ G Y E D+WS G I+ ++ G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
Query: 260 GVLFPGTDHIDQWNKI 275
F G + D ++
Sbjct: 219 TPPFYGKNEYDILKRV 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 83 DTATQQNVAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQD 141
D T Q A+K +S R + T + RE +L+K ++H NI L F + +
Sbjct: 47 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGE 106
Query: 142 VYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-- 199
VY EL D + + ++D R ++ Q+L GI + H I+HRDLKP N++++S
Sbjct: 107 VYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITYXHKNKIVHRDLKPENLLLESKS 163
Query: 200 -DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
D ++I+DFGL+ + + T YY APEV+ G Y E D+WS G I+ ++
Sbjct: 164 KDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 259 GGVLFPGTDHIDQWNKI 275
G F G + D K+
Sbjct: 223 GCPPFNGANEYDILKKV 239
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 24/176 (13%)
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ--------- 158
A RE L++ + H N+I L F + V+L+ + + +L +I+
Sbjct: 65 ACREIALLRELKHPNVISLQKVFLSHAD----RKVWLLFDYAEHDLWHIIKFHRASKANK 120
Query: 159 --MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLAR 212
+ L + LLYQ+L GI +LH+ ++HRDLKP+NI+V + +KI D G AR
Sbjct: 121 KPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180
Query: 213 TAGTTFM----MTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGGVLF 263
+ + P VVT +YRAPE++LG Y + +DIW++GCI E++ +F
Sbjct: 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VAIK + + N T ++ +RE ++MK++NH NI+ L +K+L YL+
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL------YLI 89
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 90 MEY--ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD 147
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 148 MNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 208 SLPFDGQNLKELRERVLRGKYR 229
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA+K + + N T ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL------YLV 92
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ D
Sbjct: 93 MEY--ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGD 150
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 151 MNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 211 SLPFDGQNLKELRERVLRGKYR 232
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VAIK + + N T ++ +RE ++MK++NH NI+ L +K+L YL+
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL------YLI 92
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 93 MEY--ASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD 150
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 151 MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 211 SLPFDGQNLKELRERVLRGKYR 232
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 19/202 (9%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG+GA D T AIK + + + + + E ++KL++H NI+ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 130 FTPQKSLEEFQDVYLVMELMDAN--LCQVI-QMDLDHERMSYLLYQMLCGIKHLHSAGII 186
F E+ ++ YLVME ++I +M + + ++ Q+L G+ +LH I+
Sbjct: 105 F------EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 187 HRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKEN 243
HRDLKP N++++S D +KI+DFGL+ M + T YY APEV L Y E
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEK 217
Query: 244 VDIWSVGCIMGEMIRGGVLFPG 265
D+WS+G I+ ++ G F G
Sbjct: 218 CDVWSIGVILFILLAGYPPFGG 239
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 59 ELPISHQMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 112
E P ++ K + +G G A T Q VA+KK+ + A RE
Sbjct: 10 ECPFCDEVSK-YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 113 KLMKLVNHKNIIGLLNAFTPQKSLEEF--QDVYLVMELMD---ANLCQVIQMDLDHERMS 167
K+++L+ H+N++ L+ + S +YLV + + A L + + +
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP----- 222
++ +L G+ ++H I+HRD+K +N+++ D LK+ DFGLAR P
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 223 YVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEM 256
VVT +YR PE++LG Y +D+W GCIM EM
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFD 26
+LV+DP +RI DDAL H + W D
Sbjct: 296 LLVLDPAQRIDSDDALNHDFF--WSD 319
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 59 ELPISHQMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 112
E P ++ K + +G G A T Q VA+KK+ + A RE
Sbjct: 10 ECPFCDEVSK-YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 113 KLMKLVNHKNIIGLLNAFTPQKSLEEF--QDVYLVMELMD---ANLCQVIQMDLDHERMS 167
K+++L+ H+N++ L+ + S +YLV + + A L + + +
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP----- 222
++ +L G+ ++H I+HRD+K +N+++ D LK+ DFGLAR P
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 223 YVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEM 256
VVT +YR PE++LG Y +D+W GCIM EM
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFD 26
+LV+DP +RI DDAL H + W D
Sbjct: 296 LLVLDPAQRIDSDDALNHDFF--WSD 319
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 59 ELPISHQMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 112
E P ++ K + +G G A T Q VA+KK+ + A RE
Sbjct: 9 ECPFCDEVSK-YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 67
Query: 113 KLMKLVNHKNIIGLLNAFTPQKSLEEF--QDVYLVMELMD---ANLCQVIQMDLDHERMS 167
K+++L+ H+N++ L+ + S +YLV + + A L + + +
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 127
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP----- 222
++ +L G+ ++H I+HRD+K +N+++ D LK+ DFGLAR P
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 223 YVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEM 256
VVT +YR PE++LG Y +D+W GCIM EM
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFD 26
+LV+DP +RI DDAL H + W D
Sbjct: 295 LLVLDPAQRIDSDDALNHDFF--WSD 318
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEF--QDVY 143
T Q VA+KK+ + A RE K+++L+ H+N++ L+ + S +Y
Sbjct: 42 TGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY 101
Query: 144 LVMELMD---ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
LV + + A L + + + ++ +L G+ ++H I+HRD+K +N+++ D
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD 161
Query: 201 CTLKILDFGLARTAGTTFMMTP-----YVVTRYYRAPEVILG-MGYKENVDIWSVGCIMG 254
LK+ DFGLAR P VVT +YR PE++LG Y +D+W GCIM
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 221
Query: 255 EM 256
EM
Sbjct: 222 EM 223
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 1 MLVIDPEKRISVDDALMHPYINVWFD 26
+LV+DP +RI DDAL H + W D
Sbjct: 296 LLVLDPAQRIDSDDALNHDFF--WSD 319
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA+K + + N + ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL------YLV 91
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 92 MEY--ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 210 SLPFDGQNLKELRERVLRGKYR 231
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA+K + + N + ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL------YLV 91
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 92 MEY--ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 210 SLPFDGQNLKELRERVLRGKYR 231
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA+K + + N + ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL------YLV 91
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 92 MEY--ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 210 SLPFDGQNLKELRERVLRGKYR 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA++ + + N + ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL------YLV 91
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 92 MEY--ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 210 SLPFDGQNLKELRERVLRGKYR 231
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA++ + + N + ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL------YLV 91
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H RM Q++ +++ H I+HRDLK N+++ +D
Sbjct: 92 MEY--ASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 210 SLPFDGQNLKELRERVLRGKYR 231
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 110/219 (50%), Gaps = 22/219 (10%)
Query: 63 SHQMGK---KRHN-TSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHA-KRAYRE 111
SH +GK +R+ LG G A DT VAIK + P + KR RE
Sbjct: 2 SHMIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFERE 61
Query: 112 FKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--DLDHERMSY 168
++H+NI+ +++ EE YLVME ++ L + I+ L +
Sbjct: 62 VHNSSQLSHQNIVSMIDVD------EEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAIN 115
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTTFMMTPYVV-T 226
Q+L GIKH H I+HRD+KP NI++ S+ TLKI DFG+A+ + T+ T +V+ T
Sbjct: 116 FTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175
Query: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
Y +PE G E DI+S+G ++ EM+ G F G
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 17/186 (9%)
Query: 109 YREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQM-DLDHER 165
Y E L+K ++H NII L + F +K YLV E + Q+I D
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYF------YLVTEFYEGGELFEQIINRHKFDECD 147
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL---KILDFGLARTAGTTFMMTP 222
+ ++ Q+L GI +LH I+HRD+KP NI++++ +L KI+DFGL+ + +
Sbjct: 148 AANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREA 282
+ T YY APEV L Y E D+WS G IM ++ G F G + D II K+ +
Sbjct: 208 RLGTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD----IIKKVEKG 262
Query: 283 HDKLDY 288
D+
Sbjct: 263 KYYFDF 268
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA+K + + N + ++ +RE ++MK++NH NI+ L +K+L YLV
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTL------YLV 84
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
ME A+ +V + H M Q++ +++ H I+HRDLK N+++ +D
Sbjct: 85 MEY--ASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 142
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 143 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 203 SLPFDGQNLKELRERVLRGKYR 224
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 81 AYDTATQQNVAIKKL---SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLE 137
AYD Q+VA+K + R + R + N N+I +L FT
Sbjct: 116 AYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT------ 169
Query: 138 EFQD-VYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
F++ + + EL+ NL ++I+ + + + +L + LH IIH DLKP
Sbjct: 170 -FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKP 228
Query: 193 SNIVVKSD--CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
NI++K +K++DFG + + + +R+YRAPEVILG Y +D+WS+G
Sbjct: 229 ENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI+ E++ G L PG D DQ +I
Sbjct: 287 CILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 27/244 (11%)
Query: 54 ELIYQELPISH--QMGKKRHNTSH------LGAGAAYDTATQQNV---------AIKKLS 96
E + +E+ I+H + G ++ + SH LG G+ + V A+K L
Sbjct: 6 EGVLKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLK 65
Query: 97 RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQ 155
+ V R E ++ VNH ++ L AF + L YL+++ + +L
Sbjct: 66 KATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKL------YLILDFLRGGDLFT 119
Query: 156 VIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
+ + E + + L ++ G+ HLHS GII+RDLKP NI++ + +K+ DFGL++
Sbjct: 120 RLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 179
Query: 214 A-GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQW 272
A + T Y APEV+ G+ + D WS G +M EM+ G + F G D +
Sbjct: 180 AIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETM 239
Query: 273 NKII 276
I+
Sbjct: 240 TLIL 243
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)
Query: 81 AYDTATQQNVAIKKL---SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLE 137
AYD Q+VA+K + R + R + N N+I +L FT
Sbjct: 116 AYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT------ 169
Query: 138 EFQD-VYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
F++ + + EL+ NL ++I+ + + + +L + LH IIH DLKP
Sbjct: 170 -FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKP 228
Query: 193 SNIVVKSD--CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
NI++K +K++DFG + + + +R+YRAPEVILG Y +D+WS+G
Sbjct: 229 ENILLKQQGRSGIKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI+ E++ G L PG D DQ +I
Sbjct: 287 CILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 81 AYDTATQQNVAIKKL---SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLE 137
AYD Q+VA+K + R + R + N N+I +L FT
Sbjct: 116 AYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT------ 169
Query: 138 EFQD-VYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 192
F++ + + EL+ NL ++I+ + + + +L + LH IIH DLKP
Sbjct: 170 -FRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKP 228
Query: 193 SNIVVKSD--CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
NI++K +K++DFG + + +R+YRAPEVILG Y +D+WS+G
Sbjct: 229 ENILLKQQGRSGIKVIDFGSSCYEHQRVYXX--IQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 251 CIMGEMIRGGVLFPGTDHIDQWNKII 276
CI+ E++ G L PG D DQ +I
Sbjct: 287 CILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 33/214 (15%)
Query: 81 AYDTATQQNVAIK--KLSRPFQNVTHAKRAYREFKLMKLVNHKN------IIGLLNAFTP 132
AYD Q+ VAIK K + F N +A E +L++L+N + I+ L F
Sbjct: 73 AYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127
Query: 133 QKSLEEFQDVYLVMELMDANLCQVIQ------MDLDHERMSYLLYQMLCGIKHLHSA--G 184
+ L LV E++ NL +++ + L+ R QM + L +
Sbjct: 128 RNHL------CLVFEMLSYNLYDLLRNTNFRGVSLNLTRK--FAQQMCTALLFLATPELS 179
Query: 185 IIHRDLKPSNIVV--KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IIH DLKP NI++ +KI+DFG + G + +R+YR+PEV+LGM Y
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX--IQSRFYRSPEVLLGMPYDL 237
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+D+WS+GCI+ EM G LF G + +DQ NKI+
Sbjct: 238 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 33/214 (15%)
Query: 81 AYDTATQQNVAIK--KLSRPFQNVTHAKRAYREFKLMKLVNHKN------IIGLLNAFTP 132
AYD Q+ VAIK K + F N +A E +L++L+N + I+ L F
Sbjct: 54 AYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 108
Query: 133 QKSLEEFQDVYLVMELMDANLCQVIQ------MDLDHERMSYLLYQMLCGIKHLHSA--G 184
+ L LV E++ NL +++ + L+ R QM + L +
Sbjct: 109 RNHL------CLVFEMLSYNLYDLLRNTNFRGVSLNLTRK--FAQQMCTALLFLATPELS 160
Query: 185 IIHRDLKPSNIVV--KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IIH DLKP NI++ +KI+DFG + G + +R+YR+PEV+LGM Y
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQX--IQSRFYRSPEVLLGMPYDL 218
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+D+WS+GCI+ EM G LF G + +DQ NKI+
Sbjct: 219 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 33/214 (15%)
Query: 81 AYDTATQQNVAIK--KLSRPFQNVTHAKRAYREFKLMKLVNHKN------IIGLLNAFTP 132
AYD Q+ VAIK K + F N +A E +L++L+N + I+ L F
Sbjct: 73 AYDRVEQEWVAIKIIKNKKAFLN-----QAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127
Query: 133 QKSLEEFQDVYLVMELMDANLCQVIQ------MDLDHERMSYLLYQMLCGIKHLHSA--G 184
+ L LV E++ NL +++ + L+ R QM + L +
Sbjct: 128 RNHL------CLVFEMLSYNLYDLLRNTNFRGVSLNLTRK--FAQQMCTALLFLATPELS 179
Query: 185 IIHRDLKPSNIVV--KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IIH DLKP NI++ +KI+DFG + G + +R+YR+PEV+LGM Y
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQX--IQSRFYRSPEVLLGMPYDL 237
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+D+WS+GCI+ EM G LF G + +DQ NKI+
Sbjct: 238 AIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 21/191 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNIIGLLNAFTPQKSLEEFQDVYL 144
+ Q A+K +S+ + T +E +KL H NI+ L F Q +L
Sbjct: 35 SNQAFAVKIISKRMEANTQ-----KEITALKLCEGHPNIVKLHEVFHDQ------LHTFL 83
Query: 145 VMELMDAN-LCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---K 198
VMEL++ L + I+ SY++ +++ + H+H G++HRDLKP N++
Sbjct: 84 VMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
+ +KI+DFG AR + TP T +Y APE++ GY E+ D+WS+G I+ M
Sbjct: 144 DNLEIKIIDFGFARLKPPDNQPLKTP-CFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202
Query: 257 IRGGVLFPGTD 267
+ G V F D
Sbjct: 203 LSGQVPFQSHD 213
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 18/160 (11%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLL 170
L++ H NII L + + ++ + VYLV ELM L ++++ ER S++L
Sbjct: 74 LLRYGQHPNIITLKDVY------DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL 127
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVV-----KSDCTLKILDFGLART--AGTTFMMTPY 223
+ + +++LHS G++HRDLKPSNI+ +C L+I DFG A+ A +MTP
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTP- 185
Query: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T + APEV+ GY E DIWS+G ++ M+ G F
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 18/160 (11%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLL 170
L++ H NII L + + ++ + VYLV ELM L ++++ ER S++L
Sbjct: 74 LLRYGQHPNIITLKDVY------DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL 127
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVV-----KSDCTLKILDFGLART--AGTTFMMTPY 223
+ + +++LHS G++HRDLKPSNI+ +C L+I DFG A+ A +MTP
Sbjct: 128 HTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTP- 185
Query: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T + APEV+ GY E DIWS+G ++ M+ G F
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VA+K + + N + ++ +RE ++ K++NH NI+ L +K+L YLV
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTL------YLV 91
Query: 146 MELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
E A+ +V + H R Q++ +++ H I+HRDLK N+++ +D
Sbjct: 92 XEY--ASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRG 259
+KI DFG + + + Y APE+ G Y VD+WS+G I+ ++ G
Sbjct: 150 XNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 260 GVLFPGTDHIDQWNKII-GKMR 280
+ F G + + +++ GK R
Sbjct: 210 SLPFDGQNLKELRERVLRGKYR 231
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 16/185 (8%)
Query: 86 TQQNVAIKKLSRPFQNVTHAK-RAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
TQQ VA+K +SR + R RE +KL+ H +II L + T D+ +
Sbjct: 33 TQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP------TDIVM 86
Query: 145 VMELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
V+E L I ++ +RM+ Q++C I++ H I+HRDLKP N+++
Sbjct: 87 VIEYAGGELFDYI---VEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDD 143
Query: 200 DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIR 258
+ +KI DFGL+ + + Y APEVI G Y VD+WS G ++ M+
Sbjct: 144 NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLV 203
Query: 259 GGVLF 263
G + F
Sbjct: 204 GRLPF 208
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 14/155 (9%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVI-----QMDLDH 163
+E L+K +NH N+I +F E ++ +V+EL DA +L ++I Q L
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFI------EDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 164 ERMSYLLYQMLC-GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMT 221
ER + + LC ++H+HS ++HRD+KP+N+ + + +K+ D GL R + T
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
V T YY +PE I GY DIWS+GC++ EM
Sbjct: 195 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
+Q A+K L + V R E ++ VNH I+ L AF + L YL+
Sbjct: 51 ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL------YLI 104
Query: 146 MELM-DANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
++ + +L + + E + + L ++ + HLHS GII+RDLKP NI++ +
Sbjct: 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH 164
Query: 203 LKILDFGLARTA-GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
+K+ DFGL++ + + T Y APEV+ G+ ++ D WS G +M EM+ G +
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 262 LFPGTDHIDQWNKII 276
F G D + I+
Sbjct: 225 PFQGKDRKETMTMIL 239
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 71 HNTSHLGAGAAYDTATQQNVAIKKLSR--PFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
NT G+ A Q+ I++ ++ P V R +E ++MK ++H NII L
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 129 AFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGI 185
F E+ D+YLVMEL +V+ + E + ++ +L + + H +
Sbjct: 74 TF------EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 186 IHRDLKPSNIVV---KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
HRDLKP N + D LK++DFGLA MM V T YY +P+V+ G+ Y
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGP 186
Query: 243 NVDIWSVGCIMGEMIRG 259
D WS G +M ++ G
Sbjct: 187 ECDEWSAGVMMYVLLCG 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
+Q A+K L + V R E ++ VNH I+ L AF + L YL+
Sbjct: 52 ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL------YLI 105
Query: 146 MELM-DANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
++ + +L + + E + + L ++ + HLHS GII+RDLKP NI++ +
Sbjct: 106 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH 165
Query: 203 LKILDFGLARTA-GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
+K+ DFGL++ + + T Y APEV+ G+ ++ D WS G +M EM+ G +
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
Query: 262 LFPGTDHIDQWNKII 276
F G D + I+
Sbjct: 226 PFQGKDRKETMTMIL 240
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A D TQ+ VAIK +++ E ++ + H NI+ L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME-NEIAVLHKIKHPNIVALDDI 84
Query: 130 FTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGII 186
+ E +YL+M+L+ ++++ ER S L++Q+L +K+LH GI+
Sbjct: 85 Y------ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 187 HRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKEN 243
HRDLKP N++ S D + I DFGL++ +++ T Y APEV+ Y +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 244 VDIWSVGCI 252
VD WS+G I
Sbjct: 199 VDCWSIGVI 207
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 5 DPEKRISVDDALMHPYI 21
DPEKR + + AL HP+I
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
+Q A+K L + V R E ++ VNH I+ L AF + L YL+
Sbjct: 51 ARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL------YLI 104
Query: 146 MELM-DANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
++ + +L + + E + + L ++ + HLHS GII+RDLKP NI++ +
Sbjct: 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH 164
Query: 203 LKILDFGLARTA-GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
+K+ DFGL++ + + T Y APEV+ G+ ++ D WS G +M EM+ G +
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 262 LFPGTDHIDQWNKII 276
F G D + I+
Sbjct: 225 PFQGKDRKETMTMIL 239
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 71 HNTSHLGAGAAYDTATQQNVAIKKLSR--PFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
NT G+ A Q+ I++ ++ P V R +E ++MK ++H NII L
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 129 AFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGI 185
F E+ D+YLVMEL +V+ + E + ++ +L + + H +
Sbjct: 91 TF------EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 186 IHRDLKPSNIVV---KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
HRDLKP N + D LK++DFGLA MM V T YY +P+V+ G+ Y
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGP 203
Query: 243 NVDIWSVGCIMGEMIRG 259
D WS G +M ++ G
Sbjct: 204 ECDEWSAGVMMYVLLCG 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A D TQ+ VAIK +++ E ++ + H NI+ L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME-NEIAVLHKIKHPNIVALDDI 84
Query: 130 FTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGII 186
+ E +YL+M+L+ ++++ ER S L++Q+L +K+LH GI+
Sbjct: 85 Y------ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 187 HRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKEN 243
HRDLKP N++ S D + I DFGL++ +++ T Y APEV+ Y +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 244 VDIWSVGCI 252
VD WS+G I
Sbjct: 199 VDCWSIGVI 207
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 5 DPEKRISVDDALMHPYI 21
DPEKR + + AL HP+I
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A D TQ+ VAIK +++ E ++ + H NI+ L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME-NEIAVLHKIKHPNIVALDDI 84
Query: 130 FTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGII 186
+ E +YL+M+L+ ++++ ER S L++Q+L +K+LH GI+
Sbjct: 85 Y------ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 187 HRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKEN 243
HRDLKP N++ S D + I DFGL++ +++ T Y APEV+ Y +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 244 VDIWSVGCI 252
VD WS+G I
Sbjct: 199 VDCWSIGVI 207
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 5 DPEKRISVDDALMHPYI 21
DPEKR + + AL HP+I
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A D TQ+ VAIK +++ E ++ + H NI+ L +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME-NEIAVLHKIKHPNIVALDDI 84
Query: 130 FTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGII 186
+ E +YL+M+L+ ++++ ER S L++Q+L +K+LH GI+
Sbjct: 85 Y------ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIV 138
Query: 187 HRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKEN 243
HRDLKP N++ S D + I DFGL++ +++ T Y APEV+ Y +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 244 VDIWSVGCI 252
VD WS+G I
Sbjct: 199 VDCWSIGVI 207
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 5 DPEKRISVDDALMHPYI 21
DPEKR + + AL HP+I
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 80 AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEF 139
A D + Q +AIK++ P ++ +++ + E L K + HKNI+ L +F+ ++ F
Sbjct: 40 AGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97
Query: 140 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
+ L + + + + + + Q+L G+K+LH I+HRD+K N+++ +
Sbjct: 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 157
Query: 200 -DCTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGE 255
LKI DFG + R AG + T Y APE+I GY + DIWS+GC + E
Sbjct: 158 YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
Query: 256 MIRGGVLF 263
M G F
Sbjct: 218 MATGKPPF 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 80 AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEF 139
A D + Q +AIK++ P ++ +++ + E L K + HKNI+ L +F+ ++ F
Sbjct: 26 AGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 83
Query: 140 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
+ L + + + + + + Q+L G+K+LH I+HRD+K N+++ +
Sbjct: 84 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT 143
Query: 200 -DCTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGE 255
LKI DFG + R AG + T Y APE+I GY + DIWS+GC + E
Sbjct: 144 YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
Query: 256 MIRGGVLF 263
M G F
Sbjct: 204 MATGKPPF 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 55 LIYQELPISHQMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRA 108
L +Q L +Q KK LG+GA D T AIK + + T A
Sbjct: 14 LYFQGLSDRYQRVKK------LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGA 67
Query: 109 Y-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS 167
E ++K ++H NI+ L F +++ +VY EL D + + ++D +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AA 124
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYV 224
++ Q+L G +LH I+HRDLKP N++++S D +KI+DFGL+ M +
Sbjct: 125 VIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL 184
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T YY APEV L Y E D+WS G I+ ++ G F G
Sbjct: 185 GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFGG 224
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML +P KRIS ++AL HP+I
Sbjct: 260 MLTYEPSKRISAEEALNHPWI 280
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
KK +G GA A D AT Q VAI++++ Q + E +M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNP 77
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-QMDLDHERMSYLLYQMLCGIKH 179
NI+ L+++ L ++VME L +L V+ + +D +++ + + L ++
Sbjct: 78 NIVNYLDSYLVGDEL------WVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVVTRYYRAPEVILGM 238
LHS +IHRD+K NI++ D ++K+ DFG A+ + V T Y+ APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 239 GYKENVDIWSVGCIMGEMIRG 259
Y VDIWS+G + EMI G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
KK +G GA A D AT Q VAI++++ Q + E +M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNP 77
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-QMDLDHERMSYLLYQMLCGIKH 179
NI+ L+++ L ++VME L +L V+ + +D +++ + + L ++
Sbjct: 78 NIVNYLDSYLVGDEL------WVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVVTRYYRAPEVILGM 238
LHS +IHRD+K NI++ D ++K+ DFG A+ + V T Y+ APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 239 GYKENVDIWSVGCIMGEMIRG 259
Y VDIWS+G + EMI G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
KK +G GA A D AT Q VAI++++ Q + E +M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNP 77
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-QMDLDHERMSYLLYQMLCGIKH 179
NI+ L+++ L ++VME L +L V+ + +D +++ + + L ++
Sbjct: 78 NIVNYLDSYLVGDEL------WVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVVTRYYRAPEVILGM 238
LHS +IHRD+K NI++ D ++K+ DFG A+ + V T Y+ APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 239 GYKENVDIWSVGCIMGEMIRG 259
Y VDIWS+G + EMI G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 68 KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK 121
KK +G GA A D AT Q VAI++++ Q + E +M+ +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNP 78
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-QMDLDHERMSYLLYQMLCGIKH 179
NI+ L+++ L ++VME L +L V+ + +D +++ + + L ++
Sbjct: 79 NIVNYLDSYLVGDEL------WVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEF 132
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVVTRYYRAPEVILGM 238
LHS +IHRD+K NI++ D ++K+ DFG A+ + V T Y+ APEV+
Sbjct: 133 LHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 239 GYKENVDIWSVGCIMGEMIRG 259
Y VDIWS+G + EMI G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 66 MGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY-REFKLMKLV 118
+ + LG+GA D T AIK + + T A E ++K +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIK 178
+H NI+ L F +++ +VY EL D + + ++D + ++ Q+L G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTT 118
Query: 179 HLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVI 235
+LH I+HRDLKP N++++S D +KI+DFGL+ M + T YY APEV
Sbjct: 119 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEV- 177
Query: 236 LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
L Y E D+WS G I+ ++ G F G
Sbjct: 178 LRKKYDEKCDVWSCGVILYILLCGYPPFGG 207
Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML +P KRIS ++AL HP+I
Sbjct: 243 MLTYEPSKRISAEEALNHPWI 263
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 47/217 (21%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQD---VYLVMELMDANLCQVIQMD------LDHER 165
++++ H N + F + LE F+ + +V EL+ + I+ + LDH R
Sbjct: 62 IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV-VKSDCT------------------LKIL 206
+ YQ+ + LHS + H DLKP NI+ V+SD T +K++
Sbjct: 122 K--MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 207 DFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
DFG A + V TR+YRAPEVIL +G+ + D+WS+GCI+ E G +FP
Sbjct: 180 DFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237
Query: 267 D---HIDQWNKIIG--------KMREA----HDKLDY 288
D H+ +I+G K R+ HD+LD+
Sbjct: 238 DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDW 274
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 1 MLVIDPEKRISVDDALMHPYINV 23
ML DP KRI++ +AL HP+ ++
Sbjct: 312 MLEYDPAKRITLREALKHPFFDL 334
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQ 140
A + T + VA+KK+ + + + E +M+ +H N++ + +++ L
Sbjct: 64 ATEKHTGKQVAVKKMD--LRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDEL---- 117
Query: 141 DVYLVMELMDANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
++VME ++ V ++ E+++ + +L + +LH+ G+IHRD+K +I++
Sbjct: 118 --WVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
Query: 199 SDCTLKILDFGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
SD +K+ DFG A+ + V T Y+ APEVI + Y VDIWS+G ++ EMI
Sbjct: 176 SDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
Query: 258 RG 259
G
Sbjct: 236 DG 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 20/218 (9%)
Query: 54 ELIYQELPISHQMG---KKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTH 104
E I ++L I +G KK +G GA A D AT Q VAI++++ Q
Sbjct: 4 EEILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPK 61
Query: 105 AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-QMDLD 162
+ E +M+ + NI+ L+++ L ++VME L +L V+ + +D
Sbjct: 62 KELIINEILVMRENKNPNIVNYLDSYLVGDEL------WVVMEYLAGGSLTDVVTETCMD 115
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMT 221
+++ + + L ++ LHS +IHR++K NI++ D ++K+ DFG A+ +
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 175
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
V T Y+ APEV+ Y VDIWS+G + EMI G
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 86 TQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAF-TPQKSLEEFQDVY 143
T VA+K L+R +++ + RE + +KL H +II L TP D++
Sbjct: 40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS-------DIF 92
Query: 144 LVMELMDAN-----LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+VME + +C+ ++D R L Q+L G+ + H ++HRDLKP N+++
Sbjct: 93 MVMEYVSGGELFDYICKNGRLDEKESRR--LFQQILSGVDYCHRHMVVHRDLKPENVLLD 150
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMI 257
+ KI DFGL+ + + Y APEVI G Y VDIWS G I+ ++
Sbjct: 151 AHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL 210
Query: 258 RGGVLFPGTDHIDQWNKII 276
G + F DH+ K I
Sbjct: 211 CGTLPF-DDDHVPTLFKKI 228
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 16/159 (10%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLL 170
L++ H NII L + + ++ + VY+V ELM L ++++ ER S +L
Sbjct: 69 LLRYGQHPNIITLKDVY------DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL 122
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC----TLKILDFGLART--AGTTFMMTPYV 224
+ + +++LH+ G++HRDLKPSNI+ + +++I DFG A+ A +MTP
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP-C 181
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T + APEV+ GY DIWS+G ++ M+ G F
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L+ NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 134
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFGLA R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 136
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 137 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 196
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 197 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 241
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 134
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 135
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 195
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 196 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 240
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 134
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 134
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 134
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 134
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 135
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 195
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 196 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 240
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L L NI+ LL+ Q S + L+ E ++ +V+ L + Y +Y++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHS----KTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYEL 155
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
L + + HS GI+HRD+KP N+++ + L+++D+GLA V +RY++ P
Sbjct: 156 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 215
Query: 233 EVILGM-GYKENVDIWSVGCIMGEMI-RGGVLFPGTDHIDQWNKI 275
E+++ + Y ++D+WS+GC+ MI R F G D+ DQ KI
Sbjct: 216 ELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKI 260
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-----ANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYMPGGDMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 47/217 (21%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQD---VYLVMELMDANLCQVIQMD------LDHER 165
++++ H N + F + LE F+ + +V EL+ + I+ + LDH R
Sbjct: 62 IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV-VKSDCT------------------LKIL 206
+ YQ+ + LHS + H DLKP NI+ V+SD T +K++
Sbjct: 122 K--MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 207 DFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
DFG A + V R+YRAPEVIL +G+ + D+WS+GCI+ E G +FP
Sbjct: 180 DFGSATYDDE--HHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237
Query: 267 D---HIDQWNKIIG--------KMREA----HDKLDY 288
D H+ +I+G K R+ HD+LD+
Sbjct: 238 DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDW 274
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 1 MLVIDPEKRISVDDALMHPYINV 23
ML DP KRI++ +AL HP+ ++
Sbjct: 312 MLEYDPAKRITLREALKHPFFDL 334
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-----ANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYMPGGDMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 94/192 (48%), Gaps = 24/192 (12%)
Query: 74 SHLGAGAAY------DTATQQNVAIKKLSRPFQNVTHAKRAYR-EFKLMKLVNHKNIIGL 126
S LG GA TQ+ A+K L + T K+ R E ++ ++H NII L
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKK-----TVDKKIVRTEIGVLLRLSHPNIIKL 113
Query: 127 LNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSA 183
F E ++ LV+EL+ ++++ ER + + Q+L + +LH
Sbjct: 114 KEIF------ETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 184 GIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
GI+HRDLKP N++ + D LKI DFGL++ +M T Y APE++ G Y
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY 227
Query: 241 KENVDIWSVGCI 252
VD+WSVG I
Sbjct: 228 GPEVDMWSVGII 239
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
++V+DP+KR++ AL HP++
Sbjct: 289 LIVLDPKKRLTTFQALQHPWVT 310
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 120/257 (46%), Gaps = 27/257 (10%)
Query: 29 EVHAPAPGPYDHS-VDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQ 87
++ AP P P+DH V ++ V+ + + E+ +G R H +TAT
Sbjct: 65 DIPAP-PAPFDHRIVTAKQGAVNSFYTVSKTEI-----LGGGRFGQVH----KCEETATG 114
Query: 88 QNVAIKKL-SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM 146
+A K + +R ++ K E +M ++H N+I L +AF E D+ LVM
Sbjct: 115 LKLAAKIIKTRGMKDKEEVKN---EISVMNQLDHANLIQLYDAF------ESKNDIVLVM 165
Query: 147 ELMDAN--LCQVIQMDLDHERMSYLLY--QMLCGIKHLHSAGIIHRDLKPSNIV-VKSDC 201
E +D ++I + + +L+ Q+ GI+H+H I+H DLKP NI+ V D
Sbjct: 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA 225
Query: 202 T-LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+KI+DFGLAR + T + APEV+ D+WSVG I ++ G
Sbjct: 226 KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL 285
Query: 261 VLFPGTDHIDQWNKIIG 277
F G + + N I+
Sbjct: 286 SPFLGDNDAETLNNILA 302
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 135 SLEEFQDVYLVMEL-----MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
S ++ ++Y+VME M ++L ++ + H R + Q++ ++LHS +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR--FYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 LKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
LKP N+++ +K+ DFG A R G T+ + T Y APE+IL GY + VD W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWA 224
Query: 249 VGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
+G ++ EM G F I + KI+ GK+R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 94/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFGLA R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 135 SLEEFQDVYLVMEL-----MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
S ++ ++Y+VME M ++L ++ + H R + Q++ ++LHS +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR--FYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 LKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
LKP N+++ +K+ DFG A R G T+ + T Y APE+IL GY + VD W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWA 224
Query: 249 VGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
+G ++ EM G F I + KI+ GK+R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F + I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR 256
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYAPGGEMFSHLRRIGRFXEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +K+ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVI------QMDLDH 163
E L++ + H NI+ + + + +Y+VME + +L VI + LD
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTN----TTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 164 ERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDFGLARTAG--T 216
E + ++ Q+ +K H ++HRDLKP+N+ + +K+ DFGLAR T
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+F T +V T YY +PE + M Y E DIWS+GC++ E+ L P Q ++
Sbjct: 171 SFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ-KELA 225
Query: 277 GKMREA 282
GK+RE
Sbjct: 226 GKIREG 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKL------EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKL------EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 135 SLEEFQDVYLVMEL-----MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
S ++ ++Y+VME M ++L ++ + H R + Q++ ++LHS +I+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHAR--FYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 LKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
LKP N+++ +K+ DFG A R G T+ + T Y APE+IL GY + VD W+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWA 224
Query: 249 VGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
+G ++ EM G F I + KI+ GK+R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKL------EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 112 EKRILQAVNFPFLVKL------EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHAR 165
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 166 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCG-- 221
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 222 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 137
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 138 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 193
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 194 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 130
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 131 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG-- 186
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 187 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 242
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 140 QDVYLVMELMDA-NLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
++++ VME ++ +L IQ D R ++ +++ G++ LHS GI++RDLK NI+
Sbjct: 92 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 151
Query: 197 VKSDCTLKILDFGLARTAGTTFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
+ D +KI DFG+ + T + T Y APE++LG Y +VD WS G ++ E
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 256 MIRGGVLFPGTDHIDQWNKI 275
M+ G F G D + ++ I
Sbjct: 212 MLIGQSPFHGQDEEELFHSI 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR--------EFKLMKLVNHKNIIGLL 127
LG GA + + A KL F K+A + E +++ + H+NI+ L
Sbjct: 30 LGTGAFSEVVLAEEKATGKL---FAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 128 NAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAG 184
+ + E +YLVM+L+ ++++ E+ S L+ Q+L + +LH G
Sbjct: 87 DIY------ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 185 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK 241
I+HRDLKP N++ S + + I DFGL++ G +M+ T Y APEV+ Y
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYS 200
Query: 242 ENVDIWSVGCI 252
+ VD WS+G I
Sbjct: 201 KAVDCWSIGVI 211
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 131
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 132 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCG-- 187
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 188 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 12/153 (7%)
Query: 135 SLEEFQDVYLVMEL-----MDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
S ++ ++Y+V+E M ++L ++ + H R + Q++ ++LHS +I+RD
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHAR--FYAAQIVLTFEYLHSLDLIYRD 167
Query: 190 LKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 248
LKP N+++ +K+ DFG A R G T+ + T Y APE+IL GY + VD W+
Sbjct: 168 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIILSKGYNKAVDWWA 224
Query: 249 VGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
+G ++ EM G F I + KI+ GK+R
Sbjct: 225 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKL------EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 4/140 (2%)
Query: 140 QDVYLVMELMDA-NLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
++++ VME ++ +L IQ D R ++ +++ G++ LHS GI++RDLK NI+
Sbjct: 91 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 150
Query: 197 VKSDCTLKILDFGLARTAGTTFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
+ D +KI DFG+ + T + T Y APE++LG Y +VD WS G ++ E
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210
Query: 256 MIRGGVLFPGTDHIDQWNKI 275
M+ G F G D + ++ I
Sbjct: 211 MLIGQSPFHGQDEEELFHSI 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 112 EKRILQAVNFPFLVKL------EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHAR 165
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 166 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 221
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 222 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+I+ GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 84 EKRILQAVNFPFLVKL------EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHAR 137
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 138 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 193
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 194 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPHAR 139
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 140 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 195
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 196 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 251
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVPGGEMFSHLRRIGRFXEPHAR 145
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 146 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 201
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 202 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFAEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVI------QMDLDH 163
E L++ + H NI+ + + + +Y+VME + +L VI + LD
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTN----TTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 164 ERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TT 217
E + ++ Q+ +K H ++HRDLKP+N+ + +K+ DFGLAR T
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+V T YY +PE + M Y E DIWS+GC++ E+ L P Q ++ G
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ-KELAG 226
Query: 278 KMREA 282
K+RE
Sbjct: 227 KIREG 231
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFXEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L + S ++ ++Y+VME M ++L ++ + H R
Sbjct: 112 EKRILQAVNFPFLVKL------EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHAR 165
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 166 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 221
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 222 -TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 100 QNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM 159
+N E +++ V H I+ L+ AF L YL++E + + M
Sbjct: 60 RNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL------YLILEYLSGG---ELFM 110
Query: 160 DLDHERM------SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
L+ E + + L ++ + HLH GII+RDLKP NI++ +K+ DFGL +
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170
Query: 214 AGTTFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQW 272
+ +T + T Y APE+++ G+ VD WS+G +M +M+ G F G +
Sbjct: 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 273 NKII 276
+KI+
Sbjct: 231 DKIL 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 100 QNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM 159
+N E +++ V H I+ L+ AF L YL++E + + M
Sbjct: 60 RNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL------YLILEYLSGG---ELFM 110
Query: 160 DLDHERM------SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
L+ E + + L ++ + HLH GII+RDLKP NI++ +K+ DFGL +
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170
Query: 214 AGTTFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQW 272
+ +T + T Y APE+++ G+ VD WS+G +M +M+ G F G +
Sbjct: 171 SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 273 NKII 276
+KI+
Sbjct: 231 DKIL 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y APE+IL GY + VD W++G ++ +M G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 81 AYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNIIGLLN---AFTPQKSL 136
A D ++VA+K L ++ + R RE + +NH I+ + + A TP L
Sbjct: 31 ARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90
Query: 137 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Y+VME +D L ++ + + +R ++ + H GIIHRD+KP+
Sbjct: 91 P-----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 194 NIVVKSDCTLKILDFGLART---AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 249
NI++ + +K++DFG+AR +G + T V+ T Y +PE G D++S+
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 250 GCIMGEMIRGGVLFPG 265
GC++ E++ G F G
Sbjct: 206 GCVLYEVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 81 AYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNIIGLLN---AFTPQKSL 136
A D ++VA+K L ++ + R RE + +NH I+ + + A TP L
Sbjct: 31 ARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90
Query: 137 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Y+VME +D L ++ + + +R ++ + H GIIHRD+KP+
Sbjct: 91 P-----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 194 NIVVKSDCTLKILDFGLART---AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 249
NI++ + +K++DFG+AR +G + T V+ T Y +PE G D++S+
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 250 GCIMGEMIRGGVLFPG 265
GC++ E++ G F G
Sbjct: 206 GCVLYEVLTGEPPFTG 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 81 AYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNIIGLLN---AFTPQKSL 136
A D ++VA+K L ++ + R RE + +NH I+ + + A TP L
Sbjct: 31 ARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90
Query: 137 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Y+VME +D L ++ + + +R ++ + H GIIHRD+KP+
Sbjct: 91 P-----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 194 NIVVKSDCTLKILDFGLART---AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 249
NI++ + +K++DFG+AR +G + T V+ T Y +PE G D++S+
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 250 GCIMGEMIRGGVLFPG 265
GC++ E++ G F G
Sbjct: 206 GCVLYEVLTGEPPFTG 221
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 144 LVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SDC 201
LV E ++ + Q+ Q+ D + + + +Y++L + + HS GI+HRD+KP N+++
Sbjct: 112 LVFEYINNTDFKQLYQILTDFD-IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK 170
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 171 KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRR 230
Query: 260 GVLFPGTDHIDQWNKI 275
F G D+ DQ +I
Sbjct: 231 EPFFHGQDNYDQLVRI 246
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 81 AYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNIIGLLN---AFTPQKSL 136
A D ++VA+K L ++ + R RE + +NH I+ + + A TP L
Sbjct: 31 ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90
Query: 137 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Y+VME +D L ++ + + +R ++ + H GIIHRD+KP+
Sbjct: 91 P-----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 194 NIVVKSDCTLKILDFGLART---AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 249
NI++ + +K++DFG+AR +G + T V+ T Y +PE G D++S+
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 250 GCIMGEMIRGGVLFPG 265
GC++ E++ G F G
Sbjct: 206 GCVLYEVLTGEPPFTG 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 22/179 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMM--TP 222
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ + TP
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTP 202
Query: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
+ APE+IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 203 EAL-----APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 5/136 (3%)
Query: 144 LVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SDC 201
LV E ++ + Q+ Q+ D + + + +Y++L + + HS GI+HRD+KP N+++
Sbjct: 117 LVFEYINNTDFKQLYQILTDFD-IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK 175
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 176 KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRR 235
Query: 260 GVLFPGTDHIDQWNKI 275
F G D+ DQ +I
Sbjct: 236 EPFFHGQDNYDQLVRI 251
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN-------LCQVIQMDLDH 163
E +++K ++H NII + F E++ ++Y+VME + Q L
Sbjct: 70 EIEVLKSLDHPNIIKIFEVF------EDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTTFMM 220
++ L+ QM+ + + HS ++H+DLKP NI+ + +KI+DFGLA +
Sbjct: 124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 221 TPYVVTRYYRAPEVILGMGYKENV----DIWSVGCIMGEMIRGGVLFPGTD 267
T T Y APEV +K +V DIWS G +M ++ G + F GT
Sbjct: 184 TNAAGTALYMAPEV-----FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 18/177 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHER 165
E ++++ VN ++ L +F +L Y+VME M ++L ++ + H R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNL------YMVMEYVAGGEMFSHLRRIGRFSEPHAR 144
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMTPYV 224
+ Q++ ++LHS +I+RDLKP N+++ +++ DFG A R G T+ +
Sbjct: 145 --FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG-- 200
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII-GKMR 280
T Y AP +IL GY + VD W++G ++ EM G F I + KI+ GK+R
Sbjct: 201 -TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 81 AYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNIIGLLN---AFTPQKSL 136
A D ++VA+K L ++ + R RE + +NH I+ + + A TP L
Sbjct: 48 ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 107
Query: 137 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Y+VME +D L ++ + + +R ++ + H GIIHRD+KP+
Sbjct: 108 P-----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 162
Query: 194 NIVVKSDCTLKILDFGLART---AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 249
NI++ + +K++DFG+AR +G + T V+ T Y +PE G D++S+
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 250 GCIMGEMIRGGVLFPG 265
GC++ E++ G F G
Sbjct: 223 GCVLYEVLTGEPPFTG 238
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 110 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 168
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 229 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 256
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+KK+ + + + E +M+ H+N++ + N++ ++++VME +
Sbjct: 179 VAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL------VGDELWVVMEFL 230
Query: 150 DANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+ V ++ E+++ + +L + LH+ G+IHRD+K +I++ D +K+ D
Sbjct: 231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 290
Query: 208 FGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
FG A+ + V T Y+ APE+I + Y VDIWS+G ++ EM+ G
Sbjct: 291 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 109 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 167
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 168 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 228 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 255
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 110 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 168
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 229 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 256
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 35/212 (16%)
Query: 77 GAGAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQ 133
G G ++ + N AIK++ P + + K RE K + + H I+ NA+ +
Sbjct: 17 GFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK-VMREVKALAKLEHPGIVRYFNAWLEK 75
Query: 134 KSLEEFQ----DVYLVMELMDANLCQVIQMD--------LDHERMSYLLY---QMLCGIK 178
+ E+ Q VYL +++ LC+ + ++ S L+ Q+ ++
Sbjct: 76 NTTEKLQPSSPKVYLYIQM---QLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTTFMMTPY---------VV 225
LHS G++HRDLKPSNI D +K+ DFGL + ++TP V
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG 192
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
T+ Y +PE I G Y VDI+S+G I+ E++
Sbjct: 193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 76 LGAGAAYDTATQQNV------AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA +N AIKK+ + ++ E L+ +NH+ ++ A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYAA 70
Query: 130 F-------TPQKSLEEFQDVYLVMELMD-ANLCQVIQMD-LDHERMSY--LLYQMLCGIK 178
+ P ++++ +++ ME + L +I + L+ +R Y L Q+L +
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------GTTFMMTPY 223
++HS GIIHRDLKP NI + +KI DFGLA+ G++ +T
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 224 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMR 280
+ T Y A EV+ G G Y E +D++S+G I EMI +P + +++ N I+ K+R
Sbjct: 191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-----YPFSTGMERVN-ILKKLR 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 16/196 (8%)
Query: 81 AYDTATQQNVAIKKLSRPF-QNVTHAKRAYREFKLMKLVNHKNIIGLL---NAFTPQKSL 136
A D ++VA+K L ++ + R RE + +NH I+ + A TP L
Sbjct: 31 ARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPL 90
Query: 137 EEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
Y+VME +D L ++ + + +R ++ + H GIIHRD+KP+
Sbjct: 91 P-----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 194 NIVVKSDCTLKILDFGLART---AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 249
NI++ + +K++DFG+AR +G + T V+ T Y +PE G D++S+
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 250 GCIMGEMIRGGVLFPG 265
GC++ E++ G F G
Sbjct: 206 GCVLYEVLTGEPPFTG 221
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 144 LVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-CT 202
LV E ++ + ++ L + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 170
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RGG 260
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 171 LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 230
Query: 261 VLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 231 PFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 111 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 169
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 230 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 63 SHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAK-RAYREFKLMKLVNHK 121
++Q+ K S AY T T Q VA+K +++ + + R RE ++L+ H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ-VIQMD-LDHERMSYLLYQMLCGIKH 179
+II L + KS +E + +V+E L ++Q D + + Q++ +++
Sbjct: 69 HIIKLYDVI---KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H I+HRDLKP N+++ +KI DFGL+ + + Y APEVI G
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 240 YK-ENVDIWSVGCIMGEMI 257
Y VD+WS G I+ M+
Sbjct: 183 YAGPEVDVWSCGVILYVML 201
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 63 SHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAK-RAYREFKLMKLVNHK 121
++Q+ K S AY T T Q VA+K +++ + + R RE ++L+ H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 122 NIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ-VIQMD-LDHERMSYLLYQMLCGIKH 179
+II L + KS +E + +V+E L ++Q D + + Q++ +++
Sbjct: 65 HIIKLYDVI---KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 118
Query: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H I+HRDLKP N+++ +KI DFGL+ + + Y APEVI G
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 240 YK-ENVDIWSVGCIMGEMI 257
Y VD+WS G I+ M+
Sbjct: 179 YAGPEVDVWSCGVILYVML 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAK-RAYREFKLMKLVNHKNIIGLLN 128
LG G+ AY T T Q VA+K +++ + + R RE ++L+ H +II L +
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQ-VIQMD-LDHERMSYLLYQMLCGIKHLHSAGII 186
KS +E + +V+E L ++Q D + + Q++ +++ H I+
Sbjct: 82 VI---KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 135
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVD 245
HRDLKP N+++ +KI DFGL+ + + Y APEVI G Y VD
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 195
Query: 246 IWSVGCIMGEMI 257
+WS G I+ M+
Sbjct: 196 VWSCGVILYVML 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAK-RAYREFKLMKLVNHKNIIGLLN 128
LG G+ AY T T Q VA+K +++ + + R RE ++L+ H +II L +
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQ-VIQMD-LDHERMSYLLYQMLCGIKHLHSAGII 186
KS +E + +V+E L ++Q D + + Q++ +++ H I+
Sbjct: 81 VI---KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIV 134
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVD 245
HRDLKP N+++ +KI DFGL+ + + Y APEVI G Y VD
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVD 194
Query: 246 IWSVGCIMGEMI 257
+WS G I+ M+
Sbjct: 195 VWSCGVILYVML 206
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 144 LVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-C 201
LV E + + + Q+ Q D++ + + +Y++L + + HS GI+HRD+KP N+++ +
Sbjct: 116 LVFEHVNNTDFKQLYQTLTDYD-IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR 174
Query: 202 TLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMI-RG 259
L+++D+GLA V +RY++ PE+++ Y ++D+WS+GC++ MI R
Sbjct: 175 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 234
Query: 260 GVLFPGTDHIDQWNKIIGKMREAHDKLDY 288
F G D+ DQ + I K+ D DY
Sbjct: 235 EPFFHGHDNYDQLVR-IAKVLGTEDLYDY 262
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+KK+ + + + E +M+ H+N++ + N++ L ++VME +
Sbjct: 59 VAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL------WVVMEFL 110
Query: 150 DANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+ V ++ E+++ + +L + LH+ G+IHRD+K +I++ D +K+ D
Sbjct: 111 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 170
Query: 208 FGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
FG A+ + V T Y+ APE+I + Y VDIWS+G ++ EM+ G
Sbjct: 171 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+KK+ + + + E +M+ H+N++ + N++ L ++VME +
Sbjct: 57 VAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL------WVVMEFL 108
Query: 150 DANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+ V ++ E+++ + +L + LH+ G+IHRD+K +I++ D +K+ D
Sbjct: 109 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 168
Query: 208 FGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
FG A+ + V T Y+ APE+I + Y VDIWS+G ++ EM+ G
Sbjct: 169 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+KK+ + + + E +M+ H+N++ + N++ L ++VME +
Sbjct: 102 VAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL------WVVMEFL 153
Query: 150 DANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+ V ++ E+++ + +L + LH+ G+IHRD+K +I++ D +K+ D
Sbjct: 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 213
Query: 208 FGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
FG A+ + V T Y+ APE+I + Y VDIWS+G ++ EM+ G
Sbjct: 214 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 17/202 (8%)
Query: 85 ATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
A+Q+ A+K LS+ F+ + + A+ E +M N ++ L AF K L
Sbjct: 98 ASQKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL------ 150
Query: 143 YLVMELM-DANLCQVI-QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Y+VME M +L ++ D+ + + +++ + +HS G+IHRD+KP N+++
Sbjct: 151 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH 210
Query: 201 CTLKILDFGLARTAGTTFMM--TPYVVTRYYRAPEVILGMG----YKENVDIWSVGCIMG 254
LK+ DFG T M+ V T Y +PEV+ G Y D WSVG +
Sbjct: 211 GHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 255 EMIRGGVLFPGTDHIDQWNKII 276
EM+ G F + ++KI+
Sbjct: 271 EMLVGDTPFYADSLVGTYSKIM 292
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 42/238 (17%)
Query: 76 LGAGAAYDTATQQNV------AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA +N AIKK+ + ++ E L+ +NH+ ++ A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQYVVRYYAA 70
Query: 130 F-------TPQKSLEEFQDVYLVMELMD-ANLCQVIQMD-LDHERMSY--LLYQMLCGIK 178
+ P ++++ +++ ME + L +I + L+ +R Y L Q+L +
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---------------GTTFMMTPY 223
++HS GIIHRDLKP NI + +KI DFGLA+ G++ +T
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 224 VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMR 280
+ T Y A EV+ G G Y E +D++S+G I EMI +P + +++ N I+ K+R
Sbjct: 191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-----YPFSTGMERVN-ILKKLR 242
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+KK+ + + + E +M+ H+N++ + N++ L ++VME +
Sbjct: 52 VAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL------WVVMEFL 103
Query: 150 DANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+ V ++ E+++ + +L + LH+ G+IHRD+K +I++ D +K+ D
Sbjct: 104 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 163
Query: 208 FGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
FG A+ + V T Y+ APE+I + Y VDIWS+G ++ EM+ G
Sbjct: 164 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+KK+ + + + E +M+ H+N++ + N++ L ++VME +
Sbjct: 48 VAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL------WVVMEFL 99
Query: 150 DANLCQ--VIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+ V ++ E+++ + +L + LH+ G+IHRD+K +I++ D +K+ D
Sbjct: 100 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 159
Query: 208 FGL-ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
FG A+ + V T Y+ APE+I + Y VDIWS+G ++ EM+ G
Sbjct: 160 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 83 DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
T + IK+++ + + + RE ++ + H NI+ ++S EE +
Sbjct: 45 STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY------RESFEENGSL 98
Query: 143 YLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
Y+VM+ + +L + I +++ Q+ +KH+H I+HRD+K NI +
Sbjct: 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 158
Query: 198 KSDCTLKILDFGLARTAGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
D T+++ DFG+AR +T + + T YY +PE+ Y DIW++GC++ E+
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 65 QMGKKRHNTSHLGAGA------AYDTATQQNVAIK--KLSRPFQNV----THAKRAYREF 112
+ +K S LG+GA A D + V +K K + ++ + E
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 113 KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSY 168
++ V H NII +L+ F Q + LVME + L +D LD SY
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQ------LVMEKHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
+ Q++ + +L IIHRD+K NIV+ D T+K++DFG A + + T
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIE 194
Query: 229 YRAPEVILGMGYK-ENVDIWSVGCIM 253
Y APEV++G Y+ +++WS+G +
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVI------QMDLDH 163
E L++ + H NI+ + + + +Y+VME + +L VI + LD
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTN----TTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 164 ERMSYLLYQMLCGIKHLHSAG-----IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TT 217
E + ++ Q+ +K H ++HRDLKP+N+ + +K+ DFGLAR
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
+V T YY +PE + M Y E DIWS+GC++ E+ L P Q ++ G
Sbjct: 171 DFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC---ALMPPFTAFSQ-KELAG 226
Query: 278 KMREA 282
K+RE
Sbjct: 227 KIREG 231
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MSYLL 170
L++ H NII L + + ++ + VY+V EL L ++++ ER S +L
Sbjct: 69 LLRYGQHPNIITLKDVY------DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVL 122
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC----TLKILDFGLART--AGTTFMMTPYV 224
+ + +++LH+ G++HRDLKPSNI+ + +++I DFG A+ A + TP
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP-C 181
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T + APEV+ GY DIWS+G ++ + G F
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 32 APAPGPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVA 91
AP P + ++++ + ++ ++ I +GK + +L A + ++ +A
Sbjct: 8 APENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYL----AREKQSKFILA 63
Query: 92 IKKLSRP---FQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+K L + V H R RE ++ + H NI+ L F + VYL++E
Sbjct: 64 LKVLFKAQLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY 115
Query: 149 MDANLCQVIQ-----MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
A L V + D +R + + ++ + + HS +IHRD+KP N+++ S L
Sbjct: 116 --APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGEL 173
Query: 204 KILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
KI DFG + A ++ T T Y PE+I G + E VD+WS+G + E + G F
Sbjct: 174 KIADFGWSVHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Query: 264 PGTDHIDQWNKI 275
+ + + +I
Sbjct: 233 EANTYQETYKRI 244
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 17/183 (9%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-MS 167
E ++K + H+NI+ L + + E YLVM+L+ ++++ + E+ S
Sbjct: 56 EIAVLKKIKHENIVTLEDIY------ESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS 109
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTTFMMTPYV 224
++ Q+L +K+LH GI+HRDLKP N++ + + + I DFGL++ M T
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-C 168
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHD 284
T Y APEV+ Y + VD WS+G I ++ G F + + +K+ K++E +
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF----YEETESKLFEKIKEGYY 224
Query: 285 KLD 287
+ +
Sbjct: 225 EFE 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 17/168 (10%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLD------ 162
RE + ++ H +I+ LL ++ L Y+V E MD A+LC I D
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGML------YMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFM 219
S+ + Q+L +++ H IIHRD+KP N+++ S +K+ DFG+A G + +
Sbjct: 129 EAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL 188
Query: 220 MT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
+ V T ++ APEV+ Y + VD+W G I+ ++ G + F GT
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML++DP +RI+V +AL HP++
Sbjct: 270 MLMLDPAERITVYEALNHPWLK 291
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 21/163 (12%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD----LDHERMSY 168
L K +H+NI AF + ++LVME A ++ +I+ L E ++Y
Sbjct: 74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY 133
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAG--TTFMMTP 222
+ ++L G+ HLH +IHRD+K N+++ + +K++DFG++ RT G TF+ TP
Sbjct: 134 ICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 193
Query: 223 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIRGG 260
Y+ APEVI Y D+WS+G EM G
Sbjct: 194 -----YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 38/165 (23%)
Query: 144 LVMELMDANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
+ EL+ N + ++ + L H R ++ YQ+ ++ LH + H DLKP NI+
Sbjct: 108 IAFELLGKNTFEFLKENNFQPYPLPHVR--HMAYQLCHALRFLHENQLTHTDLKPENILF 165
Query: 198 KS-------------------DCTLKILDFGLARTAGTTF---MMTPYVVTRYYRAPEVI 235
+ + ++++ DFG A TF T V TR+YR PEVI
Sbjct: 166 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-----TFDHEHHTTIVATRHYRPPEVI 220
Query: 236 LGMGYKENVDIWSVGCIMGEMIRGGVLF---PGTDHIDQWNKIIG 277
L +G+ + D+WS+GCI+ E RG LF +H+ KI+G
Sbjct: 221 LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 265
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML DP +RI++ +AL+HP+
Sbjct: 326 MLEFDPAQRITLAEALLHPFF 346
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 38/165 (23%)
Query: 144 LVMELMDANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
+ EL+ N + ++ + L H R ++ YQ+ ++ LH + H DLKP NI+
Sbjct: 131 IAFELLGKNTFEFLKENNFQPYPLPHVR--HMAYQLCHALRFLHENQLTHTDLKPENILF 188
Query: 198 KS-------------------DCTLKILDFGLARTAGTTF---MMTPYVVTRYYRAPEVI 235
+ + ++++ DFG A TF T V TR+YR PEVI
Sbjct: 189 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-----TFDHEHHTTIVATRHYRPPEVI 243
Query: 236 LGMGYKENVDIWSVGCIMGEMIRGGVLF---PGTDHIDQWNKIIG 277
L +G+ + D+WS+GCI+ E RG LF +H+ KI+G
Sbjct: 244 LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 288
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML DP +RI++ +AL+HP+
Sbjct: 349 MLEFDPAQRITLAEALLHPFF 369
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 38/165 (23%)
Query: 144 LVMELMDANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
+ EL+ N + ++ + L H R ++ YQ+ ++ LH + H DLKP NI+
Sbjct: 99 IAFELLGKNTFEFLKENNFQPYPLPHVR--HMAYQLCHALRFLHENQLTHTDLKPENILF 156
Query: 198 KS-------------------DCTLKILDFGLARTAGTTF---MMTPYVVTRYYRAPEVI 235
+ + ++++ DFG A TF T V TR+YR PEVI
Sbjct: 157 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-----TFDHEHHTTIVATRHYRPPEVI 211
Query: 236 LGMGYKENVDIWSVGCIMGEMIRGGVLF---PGTDHIDQWNKIIG 277
L +G+ + D+WS+GCI+ E RG LF +H+ KI+G
Sbjct: 212 LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG 256
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML DP +RI++ +AL+HP+
Sbjct: 317 MLEFDPAQRITLAEALLHPFF 337
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 80 AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEF 139
AAY ++ VAIK+++ + T +E + M +H NI+ +F + L
Sbjct: 33 AAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL--- 88
Query: 140 QDVYLVMELMDA-NLCQVIQ----------MDLDHERMSYLLYQMLCGIKHLHSAGIIHR 188
+LVM+L+ ++ +I+ LD ++ +L ++L G+++LH G IHR
Sbjct: 89 ---WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMT------PYVVTRYYRAPEVILGM-GYK 241
D+K NI++ D +++I DFG++ T +T +V T + APEV+ + GY
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 205
Query: 242 ENVDIWSVGCIMGEMIRGGVLF 263
DIWS G E+ G +
Sbjct: 206 FKADIWSFGITAIELATGAAPY 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLAR-----TAGTTF 218
+S ++ Q+ + +LH+ GI HRD+KP N + ++ + +K++DFGL++ G +
Sbjct: 170 ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 219 MMTPYVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
MT T Y+ APEV+ Y D WS G ++ ++ G V FPG + D ++++
Sbjct: 230 GMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL 289
Query: 277 GK 278
K
Sbjct: 290 NK 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-M 166
RE ++ +L+ H NI+ L ++ S E F YLV +L+ ++ + E
Sbjct: 52 REARICRLLKHSNIVRLHDSI----SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADA 105
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLA-RTAGTTFMMTP 222
S+ + Q+L + H H G++HRDLKP N+++ S C +K+ DFGLA G
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+ T Y +PEV+ Y + VDIW+ G I+ ++ G
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML I+P KRI+ +AL HP++
Sbjct: 244 MLTINPAKRITAHEALKHPWV 264
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 25/202 (12%)
Query: 80 AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEF 139
AAY ++ VAIK+++ + T +E + M +H NI+ +F + L
Sbjct: 28 AAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL--- 83
Query: 140 QDVYLVMELMDA-NLCQVIQ----------MDLDHERMSYLLYQMLCGIKHLHSAGIIHR 188
+LVM+L+ ++ +I+ LD ++ +L ++L G+++LH G IHR
Sbjct: 84 ---WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 140
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMT------PYVVTRYYRAPEVILGM-GYK 241
D+K NI++ D +++I DFG++ T +T +V T + APEV+ + GY
Sbjct: 141 DVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD 200
Query: 242 ENVDIWSVGCIMGEMIRGGVLF 263
DIWS G E+ G +
Sbjct: 201 FKADIWSFGITAIELATGAAPY 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 74 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 125
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 126 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 184
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 62 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 113
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 172
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE I G + E VD+WS+G + E + G F + + + +I
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 86 TQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAF-TPQKSLEEFQDVY 143
T VA+K L+R +++ + RE + +KL H +II L TP D +
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT-------DFF 87
Query: 144 LVMELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+VME + ++ H R+ L Q+L + + H ++HRDLKP N+++
Sbjct: 88 MVMEYVSGG--ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMI 257
+ KI DFGL+ + + Y APEVI G Y VDIWS G I+ ++
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 258 RGGVLF 263
G + F
Sbjct: 206 CGTLPF 211
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ--VIQMDLDHE---- 164
E K++ V+ + I+ L AF E D+ LVM +M+ + + +D D+
Sbjct: 235 EKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 165 -RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTTFMMT 221
R + Q++ G++HLH II+RDLKP N+++ D ++I D GLA AG T
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTK 347
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
Y T + APE++LG Y +VD +++G + EMI
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ--VIQMDLDHE---- 164
E K++ V+ + I+ L AF E D+ LVM +M+ + + +D D+
Sbjct: 235 EKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 165 -RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTTFMMT 221
R + Q++ G++HLH II+RDLKP N+++ D ++I D GLA AG T
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTK 347
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
Y T + APE++LG Y +VD +++G + EMI
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ--VIQMDLDHE---- 164
E K++ V+ + I+ L AF E D+ LVM +M+ + + +D D+
Sbjct: 235 EKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 165 -RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTTFMMT 221
R + Q++ G++HLH II+RDLKP N+++ D ++I D GLA AG T
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTK 347
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
Y T + APE++LG Y +VD +++G + EMI
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 86 TQQNVAIKKLSR-PFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAF-TPQKSLEEFQDVY 143
T VA+K L+R +++ + RE + +KL H +II L TP D +
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT-------DFF 87
Query: 144 LVMELMDANLCQVIQMDLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+VME + ++ H R+ L Q+L + + H ++HRDLKP N+++
Sbjct: 88 MVMEYVSGG--ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMI 257
+ KI DFGL+ + + Y APEVI G Y VDIWS G I+ ++
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 258 RGGVLF 263
G + F
Sbjct: 206 CGTLPF 211
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 54 ELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRA---YR 110
++ + +L I ++G T H D VA+K L + HA+R R
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSD------VAVKIL---MEQDFHAERVNEFLR 83
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-----QMDLDHE 164
E +MK + H NI+ + A T +L +V E L +L +++ + LD
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLS------IVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 165 RMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
R + Y + G+ +LH+ I+HR+LK N++V T+K+ DFGL+R +TF+ +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK 197
Query: 223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
T + APEV+ E D++S G I+ E+
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 54 ELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRA---YR 110
++ + +L I ++G T H D VA+K L + HA+R R
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSD------VAVKIL---MEQDFHAERVNEFLR 83
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVI-----QMDLDHE 164
E +MK + H NI+ + A T +L +V E L +L +++ + LD
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLS------IVTEYLSRGSLYRLLHKSGAREQLDER 137
Query: 165 RMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
R + Y + G+ +LH+ I+HRDLK N++V T+K+ DFGL+R + F+ +
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK 197
Query: 223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
T + APEV+ E D++S G I+ E+
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 32 APAPGPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVA 91
AP P + ++++ + ++ ++ I +GK + +L A + ++ +A
Sbjct: 8 APENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYL----AREKQSKFILA 63
Query: 92 IKKLSRP---FQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+K L + V H R RE ++ + H NI+ L F + VYL++E
Sbjct: 64 LKVLFKAQLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY 115
Query: 149 MDANLCQVIQ-----MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
A L V + D +R + + ++ + + HS +IHRD+KP N+++ S L
Sbjct: 116 --APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGEL 173
Query: 204 KILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
KI DFG + A ++ T Y PE+I G + E VD+WS+G + E + G F
Sbjct: 174 KIADFGWSVHAPSS-RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
Query: 264 PGTDHIDQWNKI 275
+ + + +I
Sbjct: 233 EANTYQETYKRI 244
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 30/138 (21%)
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV-VKSDCTL------------------KI 205
++ ++ +Q+ +K LH + H DLKP NI+ V SD L ++
Sbjct: 138 QVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRV 197
Query: 206 LDFGLARTAGTTF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL 262
+DFG A TF + V TR+YRAPEVIL +G+ + D+WS+GCI+ E G L
Sbjct: 198 VDFGSA-----TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTL 252
Query: 263 FPGTD---HIDQWNKIIG 277
F D H+ +I+G
Sbjct: 253 FQTHDNREHLAMMERILG 270
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 62 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 113
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 172
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM--DLDHERM 166
RE ++ + H NI+ L F + VYL++E + + +Q D +R
Sbjct: 62 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRT 115
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVT 226
+ + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T T
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLCGT 174
Query: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTELC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 60 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ--VIQMDLDHE---- 164
E K++ V+ + I+ L AF E D+ LVM +M+ + + +D D+
Sbjct: 235 EKKILAKVHSRFIVSLAYAF------ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 165 -RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTAGTTFMMT 221
R + Q++ G++HLH II+RDLKP N+++ D ++I D GLA AG T
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTK 347
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
Y T + APE++LG Y +VD +++G + EMI
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFM 219
LD +++ +L ++L G+ +LHS IHRD+K +N+++ +K+ DFG+A + T
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+V T ++ APEVI Y DIWS+G E+ RG
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDSTRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 109 RTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRAALC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + D + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + ++I DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 58 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLC 168
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN-----LCQVIQMDLD 162
A E ++++ VN + ++ L A+ + +L LV+ LM+ + + Q
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDAL------CLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
R + ++ CG++ LH I++RDLKP NI++ ++I D GLA +
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
V T Y APEV+ Y + D W++GC++ EMI G F
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 62 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 113
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 114 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLC 172
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 58 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS-RRTTLS 168
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 61 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 112
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 171
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 56 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 107
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 108 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 166
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFM 219
LD +++ +L ++L G+ +LHS IHRD+K +N+++ +K+ DFG+A + T
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+V T ++ APEVI Y DIWS+G E+ RG
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTXLC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFM 219
LD +++ +L ++L G+ +LHS IHRD+K +N+++ +K+ DFG+A + T
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+V T ++ APEVI Y DIWS+G E+ RG
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 60 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN-----LCQVIQMDLD 162
A E ++++ VN + ++ L A+ + +L LV+ LM+ + + Q
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDAL------CLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
R + ++ CG++ LH I++RDLKP NI++ ++I D GLA +
Sbjct: 285 EARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
Query: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
V T Y APEV+ Y + D W++GC++ EMI G F
Sbjct: 345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFM 219
LD +++ +L ++L G+ +LHS IHRD+K +N+++ +K+ DFG+A + T
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+V T ++ APEVI Y DIWS+G E+ RG
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 220
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTDLC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEIXINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 54 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 105
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 106 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRTTLC 164
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 109 YREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQ--VIQMDLDHERM 166
+ E +M+ H N++ + ++ + L +++ME + V Q+ L+ E++
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEEL------WVLMEFLQGGALTDIVSQVRLNEEQI 143
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVV 225
+ + +L + +LH+ G+IHRD+K +I++ D +K+ DFG A+ + V
Sbjct: 144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVG 203
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
T Y+ APEVI Y VDIWS+G ++ EM+ G
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VAIK+ + + + +R E ++MK +NH N++ + L L
Sbjct: 39 TGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 97
Query: 146 MELMDA-----------NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
ME + N C L + LL + +++LH IIHRDLKP N
Sbjct: 98 MEYCEGGDLRKYLNQFENCC-----GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 152
Query: 195 IVVKSDCTL---KILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
IV++ KI+D G A+ + T +V T Y APE++ Y VD WS G
Sbjct: 153 IVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 212
Query: 252 IMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHDK 285
+ E I G F QW+ GK+RE ++
Sbjct: 213 LAFECITGFRPFLPNWQPVQWH---GKVREKSNE 243
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 93/214 (43%), Gaps = 23/214 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T + VAIK+ + + + +R E ++MK +NH N++ + L L
Sbjct: 38 TGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLA 96
Query: 146 MELMDA-----------NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
ME + N C L + LL + +++LH IIHRDLKP N
Sbjct: 97 MEYCEGGDLRKYLNQFENCC-----GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151
Query: 195 IVVKSDCTL---KILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251
IV++ KI+D G A+ + T +V T Y APE++ Y VD WS G
Sbjct: 152 IVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGT 211
Query: 252 IMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHDK 285
+ E I G F QW+ GK+RE ++
Sbjct: 212 LAFECITGFRPFLPNWQPVQWH---GKVREKSNE 242
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG G + V I K +P + VT A + + E ++MK++ HK
Sbjct: 30 LGEGCFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 149 CTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 208
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 209 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 54 ELIYQELPISHQMGKKRHNTSHLGAGAAY---DTATQQNVAIKKLSRPF-QNVTHAKRAY 109
EL +++ P ++ H GA Y D + VAIKK+S Q+ +
Sbjct: 45 ELFFKDDP--EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 102
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM---DANLCQVIQMDLDHERM 166
+E + ++ + H N I + + + +LVME ++L +V + L +
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHT------AWLVMEYCLGSASDLLEVHKKPLQEVEI 156
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP---Y 223
+ + + L G+ +LHS +IHRD+K NI++ +K+ DFG A +M P +
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS------IMAPANXF 210
Query: 224 VVTRYYRAPEVILGMG---YKENVDIWSVG--CI 252
V T Y+ APEVIL M Y VD+WS+G CI
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQN------VTHAKRAYREFKLMKLVNHKNIIGLLNAFTP 132
G Y +QN I L F++ V H R RE ++ + H NI+ + N F
Sbjct: 28 GNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR--REIEIQSHLRHPNILRMYNYFHD 85
Query: 133 QKSLEEFQDVYLVMELMD-ANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
+K +YL++E L + +Q D +R + + ++ + + H +IHRD
Sbjct: 86 RKR------IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 190 LKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
+KP N+++ LKI DFG + A + T Y PE+I G + E VD+W
Sbjct: 140 IKPENLLMGYKGELKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCA 198
Query: 250 GCIMGEMIRGGVLFPGTDHIDQWNKII 276
G + E + G F H + +I+
Sbjct: 199 GVLCYEFLVGMPPFDSPSHTETHRRIV 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 54 ELIYQELPISHQMGKKRHNTSHLGAGAAY---DTATQQNVAIKKLSRPF-QNVTHAKRAY 109
EL +++ P ++ H GA Y D + VAIKK+S Q+ +
Sbjct: 6 ELFFKDDP--EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII 63
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM---DANLCQVIQMDLDHERM 166
+E + ++ + H N I + + + +LVME ++L +V + L +
Sbjct: 64 KEVRFLQKLRHPNTIQYRGCYLREHT------AWLVMEYCLGSASDLLEVHKKPLQEVEI 117
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP---Y 223
+ + + L G+ +LHS +IHRD+K NI++ +K+ DFG A +M P +
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS------IMAPANXF 171
Query: 224 VVTRYYRAPEVILGMG---YKENVDIWSVG--CI 252
V T Y+ APEVIL M Y VD+WS+G CI
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 85 ATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+T++ A+K LS+ F+ + + A+ E +M N ++ L AF + L
Sbjct: 92 STRKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL------ 144
Query: 143 YLVMELM-DANLCQVI-QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Y+VME M +L ++ D+ + + +++ + +HS G IHRD+KP N+++
Sbjct: 145 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 204
Query: 201 CTLKILDFGLARTAGTTFMM--TPYVVTRYYRAPEVILGMG----YKENVDIWSVGCIMG 254
LK+ DFG M+ V T Y +PEV+ G Y D WSVG +
Sbjct: 205 GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264
Query: 255 EMIRGGVLFPGTDHIDQWNKII 276
EM+ G F + ++KI+
Sbjct: 265 EMLVGDTPFYADSLVGTYSKIM 286
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQN------VTHAKRAYREFKLMKLVNHKNIIGLLNAFTP 132
G Y +QN I L F++ V H R RE ++ + H NI+ + N F
Sbjct: 29 GNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR--REIEIQSHLRHPNILRMYNYFHD 86
Query: 133 QKSLEEFQDVYLVMELMD-ANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
+K +YL++E L + +Q D +R + + ++ + + H +IHRD
Sbjct: 87 RKR------IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 140
Query: 190 LKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
+KP N+++ LKI DFG + A + T Y PE+I G + E VD+W
Sbjct: 141 IKPENLLMGYKGELKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCA 199
Query: 250 GCIMGEMIRGGVLFPGTDHIDQWNKII 276
G + E + G F H + +I+
Sbjct: 200 GVLCYEFLVGMPPFDSPSHTETHRRIV 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG G + V I K +P + VT A + + E ++MK++ HK
Sbjct: 89 LGEGCFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 208 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 267
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG G + V I K +P + VT A + + E ++MK++ HK
Sbjct: 35 LGEGCFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 154 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 213
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 214 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG G + V I K +P + VT A + + E ++MK++ HK
Sbjct: 32 LGEGCFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + E+ + E + A ++ D E+M++
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 151 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 210
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 211 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQN------VTHAKRAYREFKLMKLVNHKNIIGLLNAFTP 132
G Y +QN I L F++ V H R RE ++ + H NI+ + N F
Sbjct: 28 GNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLR--REIEIQSHLRHPNILRMYNYFHD 85
Query: 133 QKSLEEFQDVYLVMELMD-ANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
+K +YL++E L + +Q D +R + + ++ + + H +IHRD
Sbjct: 86 RKR------IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRD 139
Query: 190 LKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
+KP N+++ LKI DFG + A + T Y PE+I G + E VD+W
Sbjct: 140 IKPENLLMGYKGELKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCA 198
Query: 250 GCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
G + E + G F H + +I+
Sbjct: 199 GVLCYEFLVGMPPFDSPSHTETHRRIVN 226
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMDLDHER-M 166
RE ++ +L+ H NI+ L ++ S E F YLV +L+ ++ + E
Sbjct: 79 REARICRLLKHPNIVRLHDSI----SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADA 132
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLA-RTAGTTFMMTP 222
S+ ++Q+L + H+H I+HRDLKP N+++ S C +K+ DFGLA G
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+ T Y +PEV+ Y + VDIW+ G I+ ++ G
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML I+P KRI+ D AL HP++
Sbjct: 271 MLTINPAKRITADQALKHPWV 291
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 85 ATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+T++ A+K LS+ F+ + + A+ E +M N ++ L AF + L
Sbjct: 97 STRKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL------ 149
Query: 143 YLVMELM-DANLCQVI-QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Y+VME M +L ++ D+ + + +++ + +HS G IHRD+KP N+++
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 209
Query: 201 CTLKILDFGLARTAGTTFMM--TPYVVTRYYRAPEVILGMG----YKENVDIWSVGCIMG 254
LK+ DFG M+ V T Y +PEV+ G Y D WSVG +
Sbjct: 210 GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 255 EMIRGGVLFPGTDHIDQWNKII 276
EM+ G F + ++KI+
Sbjct: 270 EMLVGDTPFYADSLVGTYSKIM 291
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 61 PISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLV 118
P + GK S A + AT + AIK L + + K Y RE +M +
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRL 65
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCG 176
+H + L F + L + + + L + I+ D + +++
Sbjct: 66 DHPFFVKLYFTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPE 233
+++LH GIIHRDLKP NI++ D ++I DFG A+ +V T Y +PE
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 234 VILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
++ ++ D+W++GCI+ +++ G F + + KII
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 61 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSRFDEQ 112
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S+ LKI DFG + A ++ T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS-RRTTLC 171
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 67
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 124
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 185 EPVDVWSCGIVLTAMLAG 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 85 ATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+T++ A+K LS+ F+ + + A+ E +M N ++ L AF + L
Sbjct: 97 STRKVYAMKLLSK-FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL------ 149
Query: 143 YLVMELM-DANLCQVI-QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Y+VME M +L ++ D+ + + +++ + +HS G IHRD+KP N+++
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS 209
Query: 201 CTLKILDFGLARTAGTTFMM--TPYVVTRYYRAPEVILGMG----YKENVDIWSVGCIMG 254
LK+ DFG M+ V T Y +PEV+ G Y D WSVG +
Sbjct: 210 GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 255 EMIRGGVLFPGTDHIDQWNKII 276
EM+ G F + ++KI+
Sbjct: 270 EMLVGDTPFYADSLVGTYSKIM 291
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHER----- 165
E + + + H++++G F E+ V++V+EL C+ + H+R
Sbjct: 71 EISIHRSLAHQHVVGFHGFF------EDNDFVFVVLEL-----CRRRSLLELHKRRKALT 119
Query: 166 ---MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA------GT 216
Y L Q++ G ++LH +IHRDLK N+ + D +KI DFGLA
Sbjct: 120 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 179
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T TP Y APEV+ G+ VD+WS+GCIM ++ G F
Sbjct: 180 TLCGTP-----NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 61 PISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLV 118
P + GK S A + AT + AIK L + + K Y RE +M +
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRL 66
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCG 176
+H + L F + L + + + L + I+ D + +++
Sbjct: 67 DHPFFVKLYFTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPE 233
+++LH GIIHRDLKP NI++ D ++I DFG A+ +V T Y +PE
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 234 VILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
++ ++ D+W++GCI+ +++ G F + + KII
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 224
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 58 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 110 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LC 168
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 61 PISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLV 118
P + GK S A + AT + AIK L + + K Y RE +M +
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRL 67
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCG 176
+H + L F + L + + + L + I+ D + +++
Sbjct: 68 DHPFFVKLYFTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPE 233
+++LH GIIHRDLKP NI++ D ++I DFG A+ +V T Y +PE
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 234 VILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
++ ++ D+W++GCI+ +++ G F + + KII
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 87/170 (51%), Gaps = 17/170 (10%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERM-----SY 168
++ +V H II + F ++ Q ++++M+ ++ ++ + +R +
Sbjct: 59 MLSIVTHPFIIRMWGTF------QDAQQIFMIMDYIEGG--ELFSLLRKSQRFPNPVAKF 110
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPYVVTR 227
++ +++LHS II+RDLKP NI++ + +KI DFG A+ T+ + T
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL---CGTP 167
Query: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG 277
Y APEV+ Y +++D WS G ++ EM+ G F ++ + + KI+
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGAA------YDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GAA + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 61 PISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLV 118
P + GK S A + AT + AIK L + + K Y RE +M +
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRL 64
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCG 176
+H + L F + L + + + L + I+ D + +++
Sbjct: 65 DHPFFVKLYFTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 119
Query: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPE 233
+++LH GIIHRDLKP NI++ D ++I DFG A+ +V T Y +PE
Sbjct: 120 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 234 VILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
++ ++ D+W++GCI+ +++ G F + + KII
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 90 VAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+ KKLS R FQ + RE ++ + + H NI+ L S++E YLV +L
Sbjct: 38 INTKKLSARDFQKLE------REARICRKLQHPNIVRL------HDSIQEESFHYLVFDL 85
Query: 149 MDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CT 202
+ ++ + E S+ + Q+L I + HS GI+HR+LKP N+++ S
Sbjct: 86 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 145
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+K+ DFGLA + + T Y +PEV+ Y + VDIW+ G I+ ++ G
Sbjct: 146 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML ++P+KRI+ D AL P+I
Sbjct: 244 MLTVNPKKRITADQALKVPWI 264
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD----HERM 166
E ++ +H NI+ LL+AF + +L ++++E + ++L+ ++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNL------WILIEFCAGGAVDAVMLELERPLTESQI 137
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVV 225
+ Q L + +LH IIHRDLK NI+ D +K+ DFG+ A+ T ++
Sbjct: 138 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 197
Query: 226 TRYYRAPEVILGMGYKE-----NVDIWSVGCIMGEM 256
T Y+ APEV++ K+ D+WS+G + EM
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHER----- 165
E + + + H++++G F E+ V++V+EL C+ + H+R
Sbjct: 67 EISIHRSLAHQHVVGFHGFF------EDNDFVFVVLEL-----CRRRSLLELHKRRKALT 115
Query: 166 ---MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA------GT 216
Y L Q++ G ++LH +IHRDLK N+ + D +KI DFGLA
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 175
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T TP Y APEV+ G+ VD+WS+GCIM ++ G F
Sbjct: 176 TLCGTP-----NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + K++NH+N++
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLNHENVV----K 68
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 125
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 186 EPVDVWSCGIVLTAMLAG 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHER----- 165
E + + + H++++G F E+ V++V+EL C+ + H+R
Sbjct: 67 EISIHRSLAHQHVVGFHGFF------EDNDFVFVVLEL-----CRRRSLLELHKRRKALT 115
Query: 166 ---MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA------GT 216
Y L Q++ G ++LH +IHRDLK N+ + D +KI DFGLA
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 175
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T TP Y APEV+ G+ VD+WS+GCIM ++ G F
Sbjct: 176 TLCGTP-----NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 90 VAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+ KKLS R FQ + RE ++ + + H NI+ L S++E YLV +L
Sbjct: 39 INTKKLSARDFQKLE------REARICRKLQHPNIVRL------HDSIQEESFHYLVFDL 86
Query: 149 MDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CT 202
+ ++ + E S+ + Q+L I + HS GI+HR+LKP N+++ S
Sbjct: 87 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 146
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+K+ DFGLA + + T Y +PEV+ Y + VDIW+ G I+ ++ G
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML ++P+KRI+ D AL P+I
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 90 VAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+ KKLS R FQ + RE ++ + + H NI+ L S++E YLV +L
Sbjct: 39 INTKKLSARDFQKLE------REARICRKLQHPNIVRL------HDSIQEESFHYLVFDL 86
Query: 149 MDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CT 202
+ ++ + E S+ + Q+L I + HS GI+HR+LKP N+++ S
Sbjct: 87 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 146
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+K+ DFGLA + + T Y +PEV+ Y + VDIW+ G I+ ++ G
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML ++P+KRI+ D AL P+I
Sbjct: 245 MLTVNPKKRITADQALKVPWI 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 59 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 110
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI +FG + A ++ T
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-RRTTLC 169
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRAALC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 99 FTFQDDEKL-----YFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + + + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 60 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRAALC 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 60 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI +FG + A ++ T
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS-RRTTLC 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 97 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 32/221 (14%)
Query: 76 LGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR-------------EFKLMKLVN-HK 121
LG GA + V I K +P + VT A + + E ++MK++ HK
Sbjct: 43 LGEGAFGQVVMAEAVGIDK-DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 122 NIIGLLNAFT---PQKSLEEFQDVYLVMELMDANLCQVIQMDLD-----HERMSY----- 168
NII LL A T P + + + E + A ++ D E+M++
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRY 228
YQ+ G+++L S IHRDL N++V + +KI DFGLAR R
Sbjct: 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRL 221
Query: 229 ---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE + Y D+WS G +M E+ GG +PG
Sbjct: 222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ--MDLDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + E +
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKEAKRIPEEIL 116
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ +L G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 117 GKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 175
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y APE + G Y DIWS+G + E+ G P D
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPD 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 96 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 211 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 90 VAIKKLS-RPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+ KKLS R FQ + RE ++ + + H NI+ L S++E YLV +L
Sbjct: 62 INTKKLSARDFQKLE------REARICRKLQHPNIVRL------HDSIQEESFHYLVFDL 109
Query: 149 MDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CT 202
+ ++ + E S+ + Q+L I + HS GI+HR+LKP N+++ S
Sbjct: 110 VTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAA 169
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
+K+ DFGLA + + T Y +PEV+ Y + VDIW+ G I+
Sbjct: 170 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML ++P+KRI+ D AL P+I
Sbjct: 268 MLTVNPKKRITADQALKVPWI 288
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 100 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 215 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 104 FCFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 219 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 252
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 81 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 196 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 97 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 59 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 110
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 111 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLC 169
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 97 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 99 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 99 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 100 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 215 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM--DLDHERM 166
RE ++ + H NI+ L F + VYL++E + + +Q D +R
Sbjct: 62 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEYAPRGEVYKELQKLSKFDEQRT 115
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVT 226
+ + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++ T
Sbjct: 116 ATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLXGT 174
Query: 227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 97 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 212 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 96 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 211 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLL 127
LG G+ A + AT + AIK L + + K Y RE +M ++H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 128 NAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGI 185
F + L + + + L + I+ D + +++ +++LH GI
Sbjct: 99 FTFQDDEKL-----YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKE 242
IHRDLKP NI++ D ++I DFG A+ +V T Y +PE++ +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
+ D+W++GCI+ +++ G F + + KII
Sbjct: 214 SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 57 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 108
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 109 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLC 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + + + H++++G F E+ V++V+EL C+ + H+R
Sbjct: 91 EISIHRSLAHQHVVGFHGFF------EDNDFVFVVLEL-----CRRRSLLELHKRRKALT 139
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
Y L Q++ G ++LH +IHRDLK N+ + D +KI DFGLA
Sbjct: 140 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199
Query: 223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
+ T Y APEV+ G+ VD+WS+GCIM ++ G F
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 110/237 (46%), Gaps = 26/237 (10%)
Query: 41 SVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQ 100
S+D D+W E+ ++ + H++G ++ + G Y VA+K L +
Sbjct: 2 SMDPSSPNYDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---E 53
Query: 101 NVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ- 158
+ + +E +MK + H N++ LL T + Y+++E M NL ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRE 107
Query: 159 ---MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 214
+++ + Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
Query: 215 GTTFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
G T+ T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 24/139 (17%)
Query: 160 DLDHERMSY--LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA--- 214
+L+ +R Y L Q+L + ++HS GIIHR+LKP NI + +KI DFGLA+
Sbjct: 110 NLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 215 ------------GTTFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGGV 261
G++ +T + T Y A EV+ G G Y E +D +S+G I E I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---- 225
Query: 262 LFPGTDHIDQWNKIIGKMR 280
+P + ++ N I+ K+R
Sbjct: 226 -YPFSTGXERVN-ILKKLR 242
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 28/231 (12%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKL-SRPFQNVTHAKRAYREFKLMK 116
++ + + +GK S G A T VAIK + + +R E K+
Sbjct: 11 EDFKVGNLLGKG----SFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 117 LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-----MDANLCQVIQMDLDHERMSYLLY 171
+ H +I+ L N F E+ VYLV+E+ M+ L ++ ++E + ++
Sbjct: 67 QLKHPSILELYNYF------EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE-ARHFMH 119
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY------VV 225
Q++ G+ +LHS GI+HRDL SN+++ + +KI DFGLA T + P+
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA-----TQLKMPHEKHYTLCG 174
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
T Y +PE+ + D+WS+GC+ ++ G F + NK++
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + + + H++++G F E+ V++V+EL C+ + H+R
Sbjct: 89 EISIHRSLAHQHVVGFHGFF------EDNDFVFVVLEL-----CRRRSLLELHKRRKALT 137
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
Y L Q++ G ++LH +IHRDLK N+ + D +KI DFGLA
Sbjct: 138 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 197
Query: 223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
+ T Y APEV+ G+ VD+WS+GCIM ++ G F
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEE 138
A + AT + AIK L + + K Y RE +M ++H + L F + L
Sbjct: 54 ARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL-- 110
Query: 139 FQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
+ + + L + I+ D + +++ +++LH GIIHRDLKP NI+
Sbjct: 111 ---YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL 167
Query: 197 VKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
+ D ++I DFG A+ +V T Y +PE++ ++ D+W++GCI+
Sbjct: 168 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
Query: 254 GEMIRGGVLFPGTDHIDQWNKII 276
+++ G F + + KII
Sbjct: 228 YQLVAGLPPFRAGNEYLIFQKII 250
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 60 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRXXLC 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 61 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSRFDEQ 112
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S+ LKI DFG + A ++ T
Sbjct: 113 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LC 171
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEE 138
A + AT + AIK L + + K Y RE +M ++H + L F + L
Sbjct: 51 ARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL-- 107
Query: 139 FQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
+ + + L + I+ D + +++ +++LH GIIHRDLKP NI+
Sbjct: 108 ---YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 197 VKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
+ D ++I DFG A+ +V T Y +PE++ ++ D+W++GCI+
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
Query: 254 GEMIRG 259
+++ G
Sbjct: 225 YQLVAG 230
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 48 TVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKR 107
++D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 2 SLDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEE 53
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERM 166
+E +MK + H N++ LL T + Y++ E M NL ++ + + + +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLR-ECNRQEV 106
Query: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMM 220
S Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G TF
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF-- 164
Query: 221 TPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 165 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 100 QNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ 158
+ V H R RE ++ ++H NI+ L N F ++ +YL++E L + +Q
Sbjct: 64 EGVEHQLR--REIEIQAHLHHPNILRLYNYFYDRRR------IYLILEYAPRGELYKELQ 115
Query: 159 MD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216
D +R + ++ ++ + + H +IHRD+KP N+++ LKI DFG + A +
Sbjct: 116 KSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS 175
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
T T Y PE+I G + E VD+W +G + E++ G F H + + +I+
Sbjct: 176 LRRKT-MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV 234
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQ-----MDLDHE 164
RE ++ + H NI+ L F + VYL++E A L V + D +
Sbjct: 60 REVEIQSHLRHPNILRLYGYF------HDATRVYLILEY--APLGTVYRELQKLSKFDEQ 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
R + + ++ + + HS +IHRD+KP N+++ S LKI DFG + A ++
Sbjct: 112 RTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-RRDDLC 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y PE+I G + E VD+WS+G + E + G F + + + +I
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFM 219
D +++ +L ++L G+ +LHS IHRD+K +N+++ +K+ DFG+A + T
Sbjct: 117 FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 176
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+V T ++ APEVI Y DIWS+G E+ +G
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG 216
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + + + H++++G F E+ V++V+EL C+ + H+R
Sbjct: 65 EISIHRSLAHQHVVGFHGFF------EDNDFVFVVLEL-----CRRRSLLELHKRRKALT 113
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
Y L Q++ G ++LH +IHRDLK N+ + D +KI DFGLA
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173
Query: 223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
+ T Y APEV+ G+ VD+WS+GCIM ++ G F
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD----HERM 166
E ++ +H NI+ LL+AF + +L ++++E + ++L+ ++
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNL------WILIEFCAGGAVDAVMLELERPLTESQI 110
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMT--PYV 224
+ Q L + +LH IIHRDLK NI+ D +K+ DFG++ T + ++
Sbjct: 111 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI 170
Query: 225 VTRYYRAPEVILGMGYKE-----NVDIWSVGCIMGEM 256
T Y+ APEV++ K+ D+WS+G + EM
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 41 SVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQ 100
S+D D+W E+ ++ + H++G ++ + G Y VA+K L +
Sbjct: 2 SMDPSSPNYDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---E 53
Query: 101 NVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ- 158
+ + +E +MK + H N++ LL T + Y++ E M NL ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRE 107
Query: 159 ---MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 214
+++ + Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
Query: 215 GTTFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
G T+ T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 30/186 (16%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL----MDANLCQVIQMDLDHER 165
+E +L++ + HKN+I L++ EE Q +Y+VME M L V + +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYN----EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQ 110
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
Q++ G+++LHS GI+H+D+KP N+++ + TLKI G+A + P+
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA------LHPFAA 164
Query: 226 ---------TRYYRAPEVILGM----GYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQW 272
+ ++ PE+ G+ G+K VDIWS G + + G F G D+I +
Sbjct: 165 DDTCRTSQGSPAFQPPEIANGLDTFSGFK--VDIWSAGVTLYNITTGLYPFEG-DNIYKL 221
Query: 273 NKIIGK 278
+ IGK
Sbjct: 222 FENIGK 227
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 28/232 (12%)
Query: 47 HTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAK 106
++D+W E+ ++ + H++G ++ ++G Y VA+K L ++ +
Sbjct: 22 QSMDKW-EMERTDITMKHKLGGGQYGEVYVGVWKKYSL----TVAVKTLK---EDTMEVE 73
Query: 107 RAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHER 165
+E +MK + H N++ LL T + Y+V E M NL ++ + + E
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPF------YIVTEYMPYGNLLDYLR-ECNREE 126
Query: 166 MS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFM 219
++ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+
Sbjct: 127 VTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTY- 185
Query: 220 MTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 186 -TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD----HERM 166
E ++ +H NI+ LL+AF + +L ++++E + ++L+ ++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNL------WILIEFCAGGAVDAVMLELERPLTESQI 137
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVV 225
+ Q L + +LH IIHRDLK NI+ D +K+ DFG+ A+ ++
Sbjct: 138 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIG 197
Query: 226 TRYYRAPEVILGMGYKE-----NVDIWSVGCIMGEM 256
T Y+ APEV++ K+ D+WS+G + EM
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG GA A + T++ VA+K + + V + +E + ++NH+N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINAMLNHENVV----K 69
Query: 130 FTPQKSLEEFQDVYLVM----ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + Q ++L EL D + + D +R +Q++ G+ +LH GI
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLHGIGI 126
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
HRD+KP N+++ LKI DFGLA R ++ T Y APE++ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 242 ENVDIWSVGCIMGEMIRG 259
E VD+WS G ++ M+ G
Sbjct: 187 EPVDVWSCGIVLTAMLAG 204
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 168
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ M +V
Sbjct: 169 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDSMANSFVG 227
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 269
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN-LCQVIQMD--LDHERMSYLL 170
L+K V H ++GL +F L Y V++ ++ L +Q + R +
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKL------YFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------TAGTTFMMTPYV 224
++ + +LHS I++RDLKP NI++ S + + DFGL + + +TF TP
Sbjct: 146 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTP-- 203
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
Y APEV+ Y VD W +G ++ EM+ G F + + ++ I+ K
Sbjct: 204 ---EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK 254
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 42/232 (18%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN-----------IIGLLNA 129
A D +VA+K + + + + A E KL++ VN + I+ LL+
Sbjct: 38 AKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLY------QMLCGIKHLHS- 182
F + V +V E++ NL +I+ +H + L+Y Q+L G+ ++H
Sbjct: 95 FNHKGP--NGVHVVMVFEVLGENLLALIK-KYEHRGIP-LIYVKQISKQLLLGLDYMHRR 150
Query: 183 AGIIHRDLKPSNIVVK------SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVIL 236
GIIH D+KP N++++ + +KI D G A + T + TR YR+PEV+L
Sbjct: 151 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY--TNSIQTREYRSPEVLL 208
Query: 237 GMGYKENVDIWSVGCIMGEMIRGGVLF---------PGTDHIDQWNKIIGKM 279
G + DIWS C++ E+I G LF DHI Q +++G++
Sbjct: 209 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 2 LVIDPEKRISVDDALMHPYINVWFDD--AEVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
L + E R + L+H + V D +H PAP +V D+W E+ +
Sbjct: 161 LYVSSESRFNTLAELVHHHSTV-ADGLITTLHYPAPKRNKPTVYGVSPNYDKW-EMERTD 218
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+ + H++G ++ + G Y VA+K L ++ + +E +MK +
Sbjct: 219 ITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLK---EDTMEVEEFLKEAAVMKEIK 271
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHERMSYLLYQML 174
H N++ LL T + Y++ E M NL ++ +++ + Y+ Q+
Sbjct: 272 HPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPYVVTRY---YR 230
+++L IHR+L N +V + +K+ DFGL+R G T+ T + ++ +
Sbjct: 326 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 383
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 421
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + K +++ +++G F E+ VY+V+E+ C+ + H+R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFF------EDDDFVYVVLEI-----CRRRSLLELHKRRKAVT 140
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART------AGT 216
Y + Q + G+++LH+ +IHRDLK N+ + D +KI DFGLA
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T TP Y APEV+ G+ VDIWS+GCI+ ++ G F
Sbjct: 201 TLCGTP-----NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 42/232 (18%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKN-----------IIGLLNA 129
A D +VA+K + + + + A E KL++ VN + I+ LL+
Sbjct: 38 AKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLY------QMLCGIKHLHS- 182
F + V +V E++ NL +I+ +H + L+Y Q+L G+ ++H
Sbjct: 95 FNHKGP--NGVHVVMVFEVLGENLLALIK-KYEHRGIP-LIYVKQISKQLLLGLDYMHRR 150
Query: 183 AGIIHRDLKPSNIVVK------SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVIL 236
GIIH D+KP N++++ + +KI D G A + T + TR YR+PEV+L
Sbjct: 151 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY--TNSIQTREYRSPEVLL 208
Query: 237 GMGYKENVDIWSVGCIMGEMIRGGVLF---------PGTDHIDQWNKIIGKM 279
G + DIWS C++ E+I G LF DHI Q +++G++
Sbjct: 209 GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGEL 260
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L K+ H NII L + + D+ EL D +V + + ++ L ++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPE 233
+C LH I+HRDLKP NI++ D +K+ DFG + + T Y APE
Sbjct: 137 ICA---LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 234 VILGM------GYKENVDIWSVGCIMGEMIRGGVLF 263
+I GY + VD+WS G IM ++ G F
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1 MLVIDPEKRISVDDALMHPYINVW 24
LV+ P+KR + ++AL HP+ +
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQY 290
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAY--REFKLMKLVNHKNIIGLLNAFTPQKSLEE 138
A + AT + AIK L + + K Y RE +M ++H + L F + L
Sbjct: 51 ARELATSREYAIKILEKR-HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL-- 107
Query: 139 FQDVYLVMELMDANLCQVIQM--DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
+ + + L + I+ D + +++ +++LH GIIHRDLKP NI+
Sbjct: 108 ---YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL 164
Query: 197 VKSDCTLKILDFGLART---AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
+ D ++I DFG A+ +V T Y +PE++ ++ D+W++GCI+
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 254 GEMIRG 259
+++ G
Sbjct: 225 YQLVAG 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L K+ H NII L + + D+ EL D +V + + ++ L ++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPE 233
+C LH I+HRDLKP NI++ D +K+ DFG + + T Y APE
Sbjct: 137 ICA---LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 234 VILGM------GYKENVDIWSVGCIMGEMIRGGVLF 263
+I GY + VD+WS G IM ++ G F
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1 MLVIDPEKRISVDDALMHPYINVW 24
LV+ P+KR + ++AL HP+ +
Sbjct: 267 FLVVQPQKRYTAEEALAHPFFQQY 290
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD----HERM 166
E ++ +H NI+ LL+AF + +L ++++E + ++L+ ++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNL------WILIEFCAGGAVDAVMLELERPLTESQI 137
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVV 225
+ Q L + +LH IIHRDLK NI+ D +K+ DFG+ A+ ++
Sbjct: 138 QVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIG 197
Query: 226 TRYYRAPEVILGMGYKE-----NVDIWSVGCIMGEM 256
T Y+ APEV++ K+ D+WS+G + EM
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLD------ 162
RE + ++ H +I+ LL ++ L Y+V E MD A+LC I D
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGML------YMVFEFMDGADLCFEIVKRADAGFVYS 128
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFM 219
S+ + Q+L +++ H IIHRD+KP +++ S +K+ FG+A G + +
Sbjct: 129 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL 188
Query: 220 MTP-YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
+ V T ++ APEV+ Y + VD+W G I+ ++ G + F GT
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML++DP +RI+V +AL HP++
Sbjct: 270 MLMLDPAERITVYEALNHPWLK 291
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 106
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 107 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 165
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 74/254 (29%)
Query: 77 GAGAAYDTATQQ---NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAF--- 130
G G ++ + N AIK++ P + + K RE K + + H I+ NA+
Sbjct: 18 GFGVVFEAKNKVDDCNYAIKRIRLPNRELAREK-VMREVKALAKLEHPGIVRYFNAWLET 76
Query: 131 TPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS---------------------YL 169
P+K EE +++L E D L MD ++ YL
Sbjct: 77 PPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYL 136
Query: 170 LYQM-LC--------------------------------GIKHLHSAGIIHRDLKPSNIV 196
QM LC ++ LHS G++HRDLKPSNI
Sbjct: 137 YIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIF 196
Query: 197 VKSDCTLKILDFGLA----RTAGTTFMMTPY---------VVTRYYRAPEVILGMGYKEN 243
D +K+ DFGL + ++TP V T+ Y +PE I G Y
Sbjct: 197 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHK 256
Query: 244 VDIWSVGCIMGEMI 257
VDI+S+G I+ E++
Sbjct: 257 VDIFSLGLILFELL 270
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 2 LVIDPEKRISVDDALMHPYINVWFDD--AEVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
L + E R + L+H + V D +H PAP +V D+W E+ +
Sbjct: 203 LYVSSESRFNTLAELVHHHSTV-ADGLITTLHYPAPKRNKPTVYGVSPNYDKW-EMERTD 260
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+ + H++G ++ + G Y VA+K L ++ + +E +MK +
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLK---EDTMEVEEFLKEAAVMKEIK 313
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHERMSYLLYQML 174
H N++ LL T + Y++ E M NL ++ +++ + Y+ Q+
Sbjct: 314 HPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPYVVTRY---YR 230
+++L IHR+L N +V + +K+ DFGL+R G T+ T + ++ +
Sbjct: 368 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWT 425
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 463
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 125/279 (44%), Gaps = 31/279 (11%)
Query: 2 LVIDPEKRISVDDALMHPYINVWFDD--AEVHAPAPGPYDHSVDEREHTVDQWKELIYQE 59
L + E R + L+H + V D +H PAP ++ D+W E+ +
Sbjct: 164 LYVSSESRFNTLAELVHHHSTV-ADGLITTLHYPAPKRNKPTIYGVSPNYDKW-EMERTD 221
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
+ + H++G ++ + G Y VA+K L ++ + +E +MK +
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLK---EDTMEVEEFLKEAAVMKEIK 274
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMS-----YLLYQM 173
H N++ LL T + Y++ E M NL ++ + + + +S Y+ Q+
Sbjct: 275 HPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQI 327
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPYVVTRY---Y 229
+++L IHR+L N +V + +K+ DFGL+R G T+ T + ++ +
Sbjct: 328 SSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAHAGAKFPIKW 385
Query: 230 RAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--DLDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 133
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 192
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 23/235 (9%)
Query: 47 HTVDQWKELIYQELPISHQMGKKRHNT-SHLGAGA------AYDTATQQNVAIKKLSRPF 99
+ D WK+ Q + I H ++ LG GA + AT N A K + P
Sbjct: 29 YVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH 88
Query: 100 QNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM 159
++ R +E + M ++ H ++ L +AF E+ ++ ++ E M
Sbjct: 89 ESDKETVR--KEIQTMSVLRHPTLVNLHDAF------EDDNEMVMIYEFMSGGELFEKVA 140
Query: 160 DLDHERMSY-----LLYQMLCGIKHLHSAGIIHRDLKPSNIV--VKSDCTLKILDFGLAR 212
D +H +MS + Q+ G+ H+H +H DLKP NI+ K LK++DFGL
Sbjct: 141 D-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 199
Query: 213 TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
+ T + APEV G D+WSVG + ++ G F G +
Sbjct: 200 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 254
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLD------ 162
RE + ++ H +I+ LL ++ L Y+V E MD A+LC I D
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGML------YMVFEFMDGADLCFEIVKRADAGFVYS 130
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFM 219
S+ + Q+L +++ H IIHRD+KP +++ S +K+ FG+A G + +
Sbjct: 131 EAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL 190
Query: 220 MTP-YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
+ V T ++ APEV+ Y + VD+W G I+ ++ G + F GT
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 238
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 18/22 (81%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML++DP +RI+V +AL HP++
Sbjct: 272 MLMLDPAERITVYEALNHPWLK 293
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 72 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 191
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 192 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 106
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 107 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 165
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
L K+ H NII L + + D+ EL D +V + + ++ L ++
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPE 233
+C LH I+HRDLKP NI++ D +K+ DFG + + T Y APE
Sbjct: 124 ICA---LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 234 VILGM------GYKENVDIWSVGCIMGEMIRGGVLF 263
+I GY + VD+WS G IM ++ G F
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 1 MLVIDPEKRISVDDALMHPYINVW 24
LV+ P+KR + ++AL HP+ +
Sbjct: 254 FLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 106
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 107 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 165
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 110/238 (46%), Gaps = 28/238 (11%)
Query: 41 SVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQ 100
++D D+W E+ ++ + H++G ++ + G Y VA+K L +
Sbjct: 2 AMDPSSPNYDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---E 53
Query: 101 NVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM 159
+ + +E +MK + H N++ LL T + Y++ E M NL ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLR- 106
Query: 160 DLDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-T 213
+ + + +S Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R
Sbjct: 107 ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 166
Query: 214 AGTTFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
G T+ T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 167 TGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 75 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 194
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 195 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 23/235 (9%)
Query: 47 HTVDQWKELIYQELPISHQMGKKRHNT-SHLGAGA------AYDTATQQNVAIKKLSRPF 99
+ D WK+ Q + I H ++ LG GA + AT N A K + P
Sbjct: 135 YVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH 194
Query: 100 QNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM 159
++ R +E + M ++ H ++ L +AF E+ ++ ++ E M
Sbjct: 195 ESDKETVR--KEIQTMSVLRHPTLVNLHDAF------EDDNEMVMIYEFMSGGELFEKVA 246
Query: 160 DLDHERMSY-----LLYQMLCGIKHLHSAGIIHRDLKPSNIV--VKSDCTLKILDFGLAR 212
D +H +MS + Q+ G+ H+H +H DLKP NI+ K LK++DFGL
Sbjct: 247 D-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305
Query: 213 TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
+ T + APEV G D+WSVG + ++ G F G +
Sbjct: 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 76 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 195
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 196 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 41 SVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQ 100
++D D+W E+ ++ + H++G ++ + G Y VA+K L +
Sbjct: 2 AMDPSSPNYDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---E 53
Query: 101 NVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ- 158
+ + +E +MK + H N++ LL T + Y++ E M NL ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRE 107
Query: 159 ---MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TA 214
+++ + Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
Query: 215 GTTFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
G T+ T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 168 GDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 6 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMS- 167
+E +MK + H N++ LL T + Y+++E M NL ++ + + + +S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLR-ECNRQEVSA 110
Query: 168 ----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTP 222
Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T
Sbjct: 111 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TA 168
Query: 223 YVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
+ ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---- 212
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 213 ---TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 203 IDXXKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 203 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 68 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 127
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 128 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 187
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 188 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 6 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMS- 167
+E +MK + H N++ LL T + Y+++E M NL ++ + + + +S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLR-ECNRQEVSA 110
Query: 168 ----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTP 222
Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T
Sbjct: 111 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TA 168
Query: 223 YVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
+ ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 203 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 48 TVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKR 107
++D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 2 SLDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEE 53
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERM 166
+E +MK + H N++ LL T + Y+++E M NL ++ + + + +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLR-ECNRQEV 106
Query: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMT 221
S Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R T T
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 165
Query: 222 PYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
+ ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 106
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 107 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 165
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 106
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 107 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 165
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
TR Y +PE + G Y DIWS+G + EM G P D
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 103 THAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD- 160
+ ++E ++M+ + H ++ L +F + +D+++V++L+ +L +Q +
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDE------EDMFMVVDLLLGGDLRYHLQQNV 110
Query: 161 -LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFM 219
E + + +++ + +L + IIHRD+KP NI++ + I DF +A
Sbjct: 111 HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170
Query: 220 MTPYVVTRYYRAPEVIL---GMGYKENVDIWSVGCIMGEMIRG 259
+T T+ Y APE+ G GY VD WS+G E++RG
Sbjct: 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + K +++ +++G F E+ VY+V+E+ C+ + H+R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFF------EDDDFVYVVLEI-----CRRRSLLELHKRRKAVT 140
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP 222
Y + Q + G+++LH+ +IHRDLK N+ + D +KI DFGLA
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 223 YVV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
+ T Y APEV+ G+ VDIWS+GCI+ ++ G F
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I+ LHS I HRD+KP N++ S D LK+ DFG A+ + TP T YY AP
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVAP 179
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRGGVLFP 264
EV+ Y ++ D+WS+G IM ++ G FP
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCG---FP 208
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 83 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHN 142
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGT 266
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 203 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T Q A K ++ + ++ RE ++ +L+ H NI+ L ++ S E F YLV
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI----SEEGFH--YLV 81
Query: 146 MELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-- 200
+L+ ++ + E S+ + Q+L + H H GI+HRDLKP N+++ S
Sbjct: 82 FDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSK 141
Query: 201 -CTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
+K+ DFGLA G + T Y +PEV+ Y + VD+W+ G I+ ++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 259 G 259
G
Sbjct: 202 G 202
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML I+P KRI+ +AL HP+I
Sbjct: 244 MLTINPAKRITASEALKHPWI 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + + G T
Sbjct: 109 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 166
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 167 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + K +++ +++G F E+ VY+V+E+ C+ + H+R
Sbjct: 92 EIAIHKSLDNPHVVGFHGFF------EDDDFVYVVLEI-----CRRRSLLELHKRRKAVT 140
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMT 221
Y + Q + G+++LH+ +IHRDLK N+ + D +KI DFGLA +
Sbjct: 141 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 200
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T Y APEV+ G+ VDIWS+GCI+ ++ G F
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I+ LHS I HRD+KP N++ S D LK+ DFG A+ + TP T YY AP
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-CYTPYYVAP 198
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRGGVLFP 264
EV+ Y ++ D+WS+G IM ++ G FP
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCG---FP 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 106 KRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM--DLDH 163
++ Y+E ++K ++H N++ L+ +Y+V EL++ + L
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNE----DHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-AGTTFMMTP 222
++ + ++ GI++LH IIHRD+KPSN++V D +KI DFG++ G+ +++
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 223 YVVTRYYRAPEVI---LGMGYKENVDIWSVGCIMGEMIRGGVLF 263
V T + APE + + + +D+W++G + + G F
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
T Q A K ++ + ++ RE ++ +L+ H NI+ L ++ S E F YLV
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI----SEEGFH--YLV 81
Query: 146 MELMDAN--LCQVIQMDLDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD-- 200
+L+ ++ + E S+ + Q+L + H H GI+HRDLKP N+++ S
Sbjct: 82 FDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSK 141
Query: 201 -CTLKILDFGLA-RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR 258
+K+ DFGLA G + T Y +PEV+ Y + VD+W+ G I+ ++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 259 G 259
G
Sbjct: 202 G 202
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML I+P KRI+ +AL HP+I
Sbjct: 244 MLTINPAKRITASEALKHPWI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 8 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 59
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 113
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T +
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAH 171
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + + G T
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 26/177 (14%)
Query: 111 EFKLMKLVN-HKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDA----------NLCQV 156
E ++MK++ HKNII LL A T P + E+ + E + A N
Sbjct: 124 EMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--- 213
+ L + + YQ+ G+++L S IHRDL N++V D +KI DFGLAR
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 214 ----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
TT P + APE + Y D+WS G ++ E+ GG +PG
Sbjct: 244 IDYYKKTTNGRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMS--- 167
E + K +++ +++G F E+ VY+V+E+ C+ + H+R
Sbjct: 76 EIAIHKSLDNPHVVGFHGFF------EDDDFVYVVLEI-----CRRRSLLELHKRRKAVT 124
Query: 168 -----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFMMT 221
Y + Q + G+++LH+ +IHRDLK N+ + D +KI DFGLA +
Sbjct: 125 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK 184
Query: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
T Y APEV+ G+ VDIWS+GCI+ ++ G F
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN---LCQVIQMDLDHERMSYLLYQMLC 175
NH ++GL + F + L + V+E ++ Q L E + ++
Sbjct: 111 NHPFLVGLHSCFQTESRL------FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 164
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA------GTTFMMTPYVVTRYY 229
+ +LH GII+RDLK N+++ S+ +K+ D+G+ + +TF TP Y
Sbjct: 165 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP-----NY 219
Query: 230 RAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFP---GTDHIDQ 271
APE++ G Y +VD W++G +M EM+ G F +D+ DQ
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYL 169
RE ++ +L+ H NI+ L ++ + + D+ EL + + + + D S+
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD---ASHC 126
Query: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLA-RTAGTTFMMTPYVV 225
+ Q+L + H H G++HRDLKP N+++ S +K+ DFGLA G +
Sbjct: 127 IQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
T Y +PEV+ Y + VD+W+ G I+ ++ G
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML I+P KRI+ +AL HP+I+
Sbjct: 262 MLTINPSKRITAAEALKHPWIS 283
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 19 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 70
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 124
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T +
Sbjct: 125 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAH 182
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 230
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 6 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMS- 167
+E +MK + H N++ LL T + Y++ E M NL ++ + + + +S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLR-ECNRQEVSA 110
Query: 168 ----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTP 222
Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T
Sbjct: 111 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TA 168
Query: 223 YVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
+ ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 8 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 59
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 113
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T +
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAH 171
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 10 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 61
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 115
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T +
Sbjct: 116 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAH 173
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 6 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMS- 167
+E +MK + H N++ LL T + Y++ E M NL ++ + + + +S
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLR-ECNRQEVSA 110
Query: 168 ----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTP 222
Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T
Sbjct: 111 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TA 168
Query: 223 YVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
+ ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + + G T
Sbjct: 107 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 164
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 165 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 6 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAH 169
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 13/230 (5%)
Query: 50 DQWKELIYQELPISHQMGKKRHNT-SHLGAGA------AYDTATQQNVAIKKLSRPFQNV 102
D WK+ + Q + + ++ LG+GA + AT + K ++ P+
Sbjct: 32 DIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD 91
Query: 103 THAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD 162
+ + E +M ++H +I L +AF + + + EL D + +M +
Sbjct: 92 KYTVK--NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMS-E 148
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV--VKSDCTLKILDFGLARTAGTTFMM 220
E ++Y+ Q G+KH+H I+H D+KP NI+ K ++KI+DFGLA ++
Sbjct: 149 AEVINYMR-QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207
Query: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHID 270
T + APE++ D+W++G + ++ G F G D ++
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + + G T
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + + G T
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN---LCQVIQMDLDHERMSYLLYQMLC 175
NH ++GL + F + L + V+E ++ Q L E + ++
Sbjct: 64 NHPFLVGLHSCFQTESRL------FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 117
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTTFMMTPYVVTRYYRA 231
+ +LH GII+RDLK N+++ S+ +K+ D+G+ R TT + + T Y A
Sbjct: 118 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 174
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMIRGGVLFP---GTDHIDQ 271
PE++ G Y +VD W++G +M EM+ G F +D+ DQ
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + + G T
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 162 MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN---LCQVIQMDLDHERMSYLLYQMLC 175
NH ++GL + F + L + V+E ++ Q L E + ++
Sbjct: 68 NHPFLVGLHSCFQTESRL------FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 121
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTTFMMTPYVVTRYYRA 231
+ +LH GII+RDLK N+++ S+ +K+ D+G+ R TT + + T Y A
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 178
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMIRGGVLFP---GTDHIDQ 271
PE++ G Y +VD W++G +M EM+ G F +D+ DQ
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD----HERM 166
E +++ +H I+ LL A+ L ++++E I ++LD ++
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKL------WIMIEFCPGGAVDAIMLELDRGLTEPQI 111
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVV 225
+ QML + LHS IIHRDLK N+++ + +++ DFG+ A+ T ++
Sbjct: 112 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 171
Query: 226 TRYYRAPEVILGMGYKEN-----VDIWSVGCIMGEM 256
T Y+ APEV++ K+ DIWS+G + EM
Sbjct: 172 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLD----HERM 166
E +++ +H I+ LL A+ L ++++E I ++LD ++
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKL------WIMIEFCPGGAVDAIMLELDRGLTEPQI 119
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTTFMMTPYVV 225
+ QML + LHS IIHRDLK N+++ + +++ DFG+ A+ T ++
Sbjct: 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 179
Query: 226 TRYYRAPEVILGMGYKEN-----VDIWSVGCIMGEM 256
T Y+ APEV++ K+ DIWS+G + EM
Sbjct: 180 TPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTTFM 219
ER + +++ +++LHS +++RD+K N+++ D +KI DFGL + G T
Sbjct: 104 EERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-- 161
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 6 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAH 169
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 68 KKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
K R ++ L A + Q + + +SR + RE +++ V H N+I L
Sbjct: 30 KCREKSTGLEYAAKFIKKRQSRASRRGVSR--------EEIEREVSILRQVLHHNVITLH 81
Query: 128 NAFTPQKSLEEFQDVYLVMELMDAN-----LCQVIQMDLDHERMSYLLYQMLCGIKHLHS 182
+ + E DV L++EL+ L Q + L E + + Q+L G+ +LH+
Sbjct: 82 DVY------ENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 AGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVI--- 235
I H DLKP NI++ +K++DFGLA T + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 236 -LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
LG+ D+WS+G I ++ G F G
Sbjct: 194 PLGL----EADMWSIGVITYILLSGASPFLG 220
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 106 KRAYREFKLMKLVNHKNII---GLLNAF-----TPQKSLE---------------EFQDV 142
++A RE K + ++H NI+ G + F T SLE + + +
Sbjct: 50 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCL 109
Query: 143 YLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
++ ME D L Q I+ LD L Q+ G+ ++HS +IHRDLKPSNI +
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL 169
Query: 198 KSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
+KI DFGL + T T Y +PE I Y + VD++++G I+ E++
Sbjct: 170 VDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA 129
LG G+ A T Q VAIK++ P + + + +E +M+ + +++ +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV--PVE--SDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 130 FTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGI 185
+ D+++VME A ++ +I++ L + ++ +L L G+++LH
Sbjct: 93 YFKNT------DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV-TRYYRAPEVILGMGYKENV 244
IHRD+K NI++ ++ K+ DFG+A V+ T ++ APEVI +GY
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 245 DIWSVGCIMGEMIRG 259
DIWS+G EM G
Sbjct: 207 DIWSLGITAIEMAEG 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 119 NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN---LCQVIQMDLDHERMSYLLYQMLC 175
NH ++GL + F + L + V+E ++ Q L E + ++
Sbjct: 79 NHPFLVGLHSCFQTESRL------FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 132
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTTFMMTPYVVTRYYRA 231
+ +LH GII+RDLK N+++ S+ +K+ D+G+ R TT + + T Y A
Sbjct: 133 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIA 189
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMIRGGVLFP---GTDHIDQ 271
PE++ G Y +VD W++G +M EM+ G F +D+ DQ
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 142 VYLVMELMDA-NLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
V + MEL++ +L Q++ Q L +R Y L Q L G+++LHS I+H D+K N+++
Sbjct: 160 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
Query: 199 SDCT-LKILDFGLART-----AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 251
SD + + DFG A G + + Y+ T + APEV+LG VD+WS C
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 279
Query: 252 IMGEMIRG 259
+M M+ G
Sbjct: 280 MMLHMLNG 287
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-RTAGTTFM 219
L+ ++ +L ++L G+ +LHS IHRD+K +N+++ +K+ DFG+A + T
Sbjct: 113 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 172
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
+V T ++ APEVI Y DIWS+G E+ +G
Sbjct: 173 RNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 41 SVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQ 100
++D D+W E+ ++ + H++G ++ + G Y VA+K L +
Sbjct: 2 AMDPSSPNYDKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---E 53
Query: 101 NVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ- 158
+ + +E +MK + H N++ LL T + Y++ E M NL ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRE 107
Query: 159 ---MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
+++ + Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R
Sbjct: 108 CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM- 166
Query: 216 TTFMMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
T T + ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 167 TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 24/227 (10%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 7 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 58
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y+++E M NL ++ +++
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQEVNAV 112
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R T T +
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHA 171
Query: 225 VTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 172 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--DLDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 125
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ + M +V
Sbjct: 126 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-MANSFVG 184
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
TR Y +PE + G Y DIWS+G + EM G
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 68 KKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
K R ++ L A + Q + + +SR + RE +++ V H N+I L
Sbjct: 30 KCREKSTGLEYAAKFIKKRQSRASRRGVSR--------EEIEREVSILRQVLHHNVITLH 81
Query: 128 NAFTPQKSLEEFQDVYLVMELMDAN-----LCQVIQMDLDHERMSYLLYQMLCGIKHLHS 182
+ + E DV L++EL+ L Q + L E + + Q+L G+ +LH+
Sbjct: 82 DVY------ENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 AGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVI--- 235
I H DLKP NI++ +K++DFGLA T + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 236 -LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
LG+ D+WS+G I ++ G F G
Sbjct: 194 PLGL----EADMWSIGVITYILLSGASPFLG 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 33/211 (15%)
Query: 68 KKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
K R ++ L A + Q + + +SR + RE +++ V H N+I L
Sbjct: 30 KCREKSTGLEYAAKFIKKRQSRASRRGVSR--------EEIEREVSILRQVLHHNVITLH 81
Query: 128 NAFTPQKSLEEFQDVYLVMELMDAN-----LCQVIQMDLDHERMSYLLYQMLCGIKHLHS 182
+ + E DV L++EL+ L Q + L E + + Q+L G+ +LH+
Sbjct: 82 DVY------ENRTDVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHT 133
Query: 183 AGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVI--- 235
I H DLKP NI++ +K++DFGLA T + APE++
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 236 -LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
LG+ D+WS+G I ++ G F G
Sbjct: 194 PLGL----EADMWSIGVITYILLSGASPFLG 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 77 GAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSL 136
G G Y + + ++LS + V+ + RE +++ + H NII L + F
Sbjct: 35 GTGKEY---AAKFIKKRRLSSSRRGVSR-EEIEREVNILREIRHPNIITLHDIF------ 84
Query: 137 EEFQDVYLVMELMDA-NLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E DV L++EL+ L + + L + + L Q+L G+ +LHS I H DLKP
Sbjct: 85 ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPE 144
Query: 194 NIVVKS----DCTLKILDFGLART--AGTTF---MMTPYVVTRYYRAPEVI----LGMGY 240
NI++ + +K++DFG+A AG F TP V APE++ LG+
Sbjct: 145 NIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV-----APEIVNYEPLGL-- 197
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPG 265
D+WS+G I ++ G F G
Sbjct: 198 --EADMWSIGVITYILLSGASPFLG 220
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERM 166
RE +++ N I+G AF ++ + ME MD +L QV++ + + +
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDG------EISICMEHMDGGSLDQVLKKAGRIPEQIL 109
Query: 167 SYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV 225
+ ++ G+ +L I+HRD+KPSNI+V S +K+ DFG++ M +V
Sbjct: 110 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDEMANEFVG 168
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
TR Y +PE + G Y DIWS+G + EM G
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 93 KKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN 152
K+ SR + + RE +++ V H N+I L + + E DV L++EL+
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGG 100
Query: 153 -----LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----L 203
L Q + L E + + Q+L G+ +LH+ I H DLKP NI++ +
Sbjct: 101 ELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 204 KILDFGLARTAGTTFMMTPYVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRG 259
K++DFGLA T + APE++ LG+ D+WS+G I ++ G
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSG 214
Query: 260 GVLFPG 265
F G
Sbjct: 215 ASPFLG 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 15/167 (8%)
Query: 106 KRAYREFKLMKLVNHKNII---GLLNAF-------TPQKSLEEFQDVYLVMELMD-ANLC 154
++A RE K + ++H NI+ G + F + S + + +++ ME D L
Sbjct: 49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE 108
Query: 155 QVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
Q I+ LD L Q+ G+ ++HS +I+RDLKPSNI + +KI DFGL
Sbjct: 109 QWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 211 ARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
+ T Y +PE I Y + VD++++G I+ E++
Sbjct: 169 VTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 35/205 (17%)
Query: 77 GAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSL 136
G G Y + + ++LS + V+ + RE +++ + H NII L + F
Sbjct: 28 GTGKEY---AAKFIKKRRLSSSRRGVSR-EEIEREVNILREIRHPNIITLHDIF------ 77
Query: 137 EEFQDVYLVMELMDAN-LCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E DV L++EL+ L + + L + + L Q+L G+ +LHS I H DLKP
Sbjct: 78 ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPE 137
Query: 194 NIVVKS----DCTLKILDFGLART--AGTTF---MMTPYVVTRYYRAPEVI----LGMGY 240
NI++ + +K++DFG+A AG F TP V APE++ LG+
Sbjct: 138 NIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV-----APEIVNYEPLGL-- 190
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPG 265
D+WS+G I ++ G F G
Sbjct: 191 --EADMWSIGVITYILLSGASPFLG 213
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 194 EVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN-LCQVIQ-MDLDHERMS 167
+E KL ++ H NII L + +L LVME L +V+ + + +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNL------CLVMEFARGGPLNRVLSGKRIPPDILV 108
Query: 168 YLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVK--------SDCTLKILDFGLARTAGT 216
Q+ G+ +LH I IHRDLK SNI++ S+ LKI DFGLAR
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
T M+ + APEVI + + D+WS G ++ E++ G V F G D +
Sbjct: 169 TTKMS-AAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 193 EVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 144 LVMELMDA-NLCQVIQMDLDH---ER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+VME +D L IQ D ER S ++ + I++LHS I HRD+KP N++
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 199 S---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
S + LK+ DFG A+ + +T T YY APEV+ Y ++ D+WS+G IM
Sbjct: 152 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 211
Query: 256 MIRG 259
++ G
Sbjct: 212 LLCG 215
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 93 KKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN 152
K+ SR + + RE +++ V H N+I L + + E DV L++EL+
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY------ENRTDVVLILELVSGG 100
Query: 153 -----LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----L 203
L Q + L E + + Q+L G+ +LH+ I H DLKP NI++ +
Sbjct: 101 ELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 204 KILDFGLARTAGTTFMMTPYVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRG 259
K++DFGLA T + APE++ LG+ D+WS+G I ++ G
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSG 214
Query: 260 GVLFPG 265
F G
Sbjct: 215 ASPFLG 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 233 EVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 62 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 218
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWI 274
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 26/230 (11%)
Query: 48 TVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKR 107
++D+W E+ ++ + H++G + + G Y VA+K L ++ +
Sbjct: 2 SLDKW-EMERTDITMKHKLGGGQFGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEE 53
Query: 108 AYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERM 166
+E +MK + H N++ LL T + Y++ E M NL ++ + + + +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLR-ECNRQEV 106
Query: 167 S-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMT 221
S Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R T T
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 165
Query: 222 PYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
+ ++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 166 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 62 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 176 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 218
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWI 274
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 239 EVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 189 EVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 195 EVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 7 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 58
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 112
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T
Sbjct: 113 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAP 170
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 188 EVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 144 LVMELMDAN-LCQVIQMDLDH---ER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+VME +D L IQ D ER S ++ + I++LHS I HRD+KP N++
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 199 S---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
S + LK+ DFG A+ + +T T YY APEV+ Y ++ D+WS+G IM
Sbjct: 166 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 93 KKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN 152
K+ SR + + RE +++ V H NII L + + E DV L++EL+
Sbjct: 47 KRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY------ENRTDVVLILELVSGG 100
Query: 153 -----LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----L 203
L Q + L E + + Q+L G+ +LH+ I H DLKP NI++ +
Sbjct: 101 ELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHI 158
Query: 204 KILDFGLARTAGTTFMMTPYVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRG 259
K++DFGLA T + APE++ LG+ D+WS+G I ++ G
Sbjct: 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSG 214
Query: 260 GVLFPG 265
F G
Sbjct: 215 ASPFLG 220
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIRG 259
EV+ Y ++ D+WS+G IM ++ G
Sbjct: 187 EVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 26/228 (11%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ ++ + H++G ++ + G Y VA+K L ++ +
Sbjct: 8 DKW-EMERTDITMKHKLGGGQYGEVYEGVWKKYSL----TVAVKTLK---EDTMEVEEFL 59
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
+E +MK + H N++ LL T + Y++ E M NL ++ +++
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAV 113
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
+ Y+ Q+ +++L IHRDL N +V + +K+ DFGL+R G T+ T
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--TAP 171
Query: 224 VVTRY---YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTD 267
++ + APE + + D+W+ G ++ E+ G+ +PG D
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE----- 164
+E K+M+ + H N++ + K L + E + + I +D +
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLN------FITEYIKGGTLRGIIKSMDSQYPWSQ 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGT 216
R+S+ + G+ +LHS IIHRDL N +V+ + + + DFGLAR G
Sbjct: 110 RVSFA-KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 217 TFMMTP-------YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
+ P V Y+ APE+I G Y E VD++S G ++ E+I
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYL 169
RE ++ +L+ H NI+ L ++ + + D+ EL + + + + D S+
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD---ASHC 115
Query: 170 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLA-RTAGTTFMMTPYVV 225
+ Q+L + H H G++HR+LKP N+++ S +K+ DFGLA G +
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
T Y +PEV+ Y + VD+W+ G I+ ++ G
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML I+P KRI+ +AL HP+I+
Sbjct: 251 MLTINPSKRITAAEALKHPWIS 272
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 142 VYLVMELMDA-NLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
V + MEL++ +L Q++ Q L +R Y L Q L G+++LHS I+H D+K N+++
Sbjct: 141 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
Query: 199 SDCT-LKILDFGLART-----AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 251
SD + + DFG A G + Y+ T + APEV+LG VD+WS C
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 260
Query: 252 IMGEMIRG 259
+M M+ G
Sbjct: 261 MMLHMLNG 268
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPAFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L++EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 31/172 (18%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDAN-LCQVI--QMDLDHERM 166
RE +++ + H NII L + F E DV L++EL+ L + + L +
Sbjct: 78 REVNILREIRHPNIITLHDIF------ENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS----DCTLKILDFGLART--AGTTF-- 218
+ L Q+L G+ +LHS I H DLKP NI++ + +K++DFG+A AG F
Sbjct: 132 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 191
Query: 219 -MMTPYVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
TP V APE++ LG+ D+WS+G I ++ G F G
Sbjct: 192 IFGTPEFV-----APEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 234
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 119 NHKNIIGLLNAF-TPQKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQML 174
NH + L F TP + ++ VME ++ +L IQ D R + +++
Sbjct: 82 NHPFLTQLFCCFQTPDR-------LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEII 134
Query: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP-YVVTRYYRAPE 233
+ LH GII+RDLK N+++ + K+ DFG+ + + T + T Y APE
Sbjct: 135 SALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE 194
Query: 234 VILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
++ M Y VD W++G ++ EM+ G F + D + I+
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 142 VYLVMELMDAN-----LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
+Y VME ++ + QV + H + ++ G+ L S GII+RDLK N++
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPH--AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474
Query: 197 VKSDCTLKILDFGLARTA---GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
+ S+ +KI DFG+ + G T + T Y APE+I Y ++VD W+ G ++
Sbjct: 475 LDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 254 GEMIRGGVLFPGTDHIDQWNKII 276
EM+ G F G D + + I+
Sbjct: 533 YEMLAGQAPFEGEDEDELFQSIM 555
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
Query: 142 VYLVMELMDAN-----LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
+Y VME ++ + QV + H + ++ G+ L S GII+RDLK N++
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPH--AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 153
Query: 197 VKSDCTLKILDFGLARTA---GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
+ S+ +KI DFG+ + G T + T Y APE+I Y ++VD W+ G ++
Sbjct: 154 LDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 254 GEMIRGGVLFPGTDHIDQWNKII 276
EM+ G F G D + + I+
Sbjct: 212 YEMLAGQAPFEGEDEDELFQSIM 234
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 57 YQELPIS---HQMGKKRHNTSHLGAGAAYDT-ATQQNVAIKKLSRPFQNVTHA-KRAY-R 110
+ E PIS ++MG+ G G Y VA+KKL+ T K+ + +
Sbjct: 27 FDERPISVGGNKMGEG-------GFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM---ELMDANLCQVIQMDLDHERMS 167
E K+M H+N++ LL F+ ++ VY+ M L+D C L
Sbjct: 80 EIKVMAKCQHENLVELL-GFSSDG--DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYV 224
+ GI LH IHRD+K +NI++ T KI DFGLAR + T M + V
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIV 196
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T Y APE + G DI+S G ++ E+I G P D
Sbjct: 197 GTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG---LPAVDE 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 142 VYLVMELMDA-NLCQVIQMDLDHERMSYLLY--QMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+Y VME ++ +L IQ + + Y ++ G+ LH GII+RDLK N+++
Sbjct: 95 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 199 SDCTLKILDFGLARTAGTTFMMT-PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
S+ +KI DFG+ + + T + T Y APE+I Y ++VD W+ G ++ EM+
Sbjct: 155 SEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Query: 258 RGGVLFPGTDHIDQWNKII 276
G F G D + + I+
Sbjct: 215 AGQPPFDGEDEDELFQSIM 233
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 142 VYLVMELMDA-NLCQVI-QMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
V + MEL++ +L Q+I QM L +R Y L Q L G+++LH+ I+H D+K N+++
Sbjct: 141 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 200
Query: 199 SDCTLKIL-DFGLART-----AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 251
SD + L DFG A G + + Y+ T + APEV++G VDIWS C
Sbjct: 201 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCC 260
Query: 252 IMGEMIRG 259
+M M+ G
Sbjct: 261 MMLHMLNG 268
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERM 166
RE ++K + H N+I L + E DV L+ EL+ L + + L E
Sbjct: 63 REVSILKEIQHPNVITLHEVY------ENKTDVILIGELVAGGELFDFLAEKESLTEEEA 116
Query: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT----LKILDFGLARTAGTTFMMTP 222
+ L Q+L G+ +LHS I H DLKP NI++ +KI+DFGLA
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 223 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + APE++ LG+ D+WS+G I ++ G F G
Sbjct: 177 IFGTPEFVAPEIVNYEPLGL----EADMWSIGVITYILLSGASPFLG 219
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 18/21 (85%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+LV DP+KR+++ D+L HP+I
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWI 275
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 71 HNTSHLGAGAAYDTA----TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGL 126
H T G A A T + VAIK + + + R E + +K + H++I L
Sbjct: 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQL 73
Query: 127 LNAFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMD-LDHERMSYLLYQMLCGIKHLHSA 183
+ LE +++V+E +I D L E + Q++ + ++HS
Sbjct: 74 YHV------LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTT-FMMTPYVVTRYYRAPEVILGMGY- 240
G HRDLKP N++ LK++DFGL A+ G + + + Y APE+I G Y
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYL 187
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMREAHD 284
D+WS+G ++ ++ G + F + + + KI MR +D
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI---MRGKYD 228
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 17/21 (80%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
ML +DP+KRIS+ + L HP+I
Sbjct: 244 MLQVDPKKRISMKNLLNHPWI 264
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 88 QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
++VAIK++ ++ + K E + + VNH NI+ L A V LVME
Sbjct: 33 KDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGAC--------LNPVCLVME 80
Query: 148 LMDANL-------CQVIQMDLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV- 196
+ + + MS+ L Q G+ +LHS +IHRDLKP N++
Sbjct: 81 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCL-QCSQGVAYLHSMQPKALIHRDLKPPNLLL 139
Query: 197 VKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
V LKI DFG A T MT + + APEV G Y E D++S G I+ E+
Sbjct: 140 VAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
Query: 257 I 257
I
Sbjct: 198 I 198
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 142 VYLVMELMDA-NLCQVI-QMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
V + MEL++ +L Q+I QM L +R Y L Q L G+++LH+ I+H D+K N+++
Sbjct: 139 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 198
Query: 199 SDCTLKIL-DFGLART-----AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 251
SD + L DFG A G + + Y+ T + APEV++G VDIWS C
Sbjct: 199 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCC 258
Query: 252 IMGEMIRG 259
+M M+ G
Sbjct: 259 MMLHMLNG 266
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 88 QNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
++VAIK++ ++ + K E + + VNH NI+ L A V LVME
Sbjct: 32 KDVAIKQI----ESESERKAFIVELRQLSRVNHPNIVKLYGAC--------LNPVCLVME 79
Query: 148 LMDANL-------CQVIQMDLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV- 196
+ + + MS+ L Q G+ +LHS +IHRDLKP N++
Sbjct: 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCL-QCSQGVAYLHSMQPKALIHRDLKPPNLLL 138
Query: 197 VKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
V LKI DFG A T MT + + APEV G Y E D++S G I+ E+
Sbjct: 139 VAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
Query: 257 I 257
I
Sbjct: 197 I 197
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 142 VYLVMELMDA-NLCQVI-QMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
V + MEL++ +L Q+I QM L +R Y L Q L G+++LH+ I+H D+K N+++
Sbjct: 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 184
Query: 199 SDCTLKIL-DFGLART-----AGTTFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSVGC 251
SD + L DFG A G + + Y+ T + APEV++G VDIWS C
Sbjct: 185 SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCC 244
Query: 252 IMGEMIRG 259
+M M+ G
Sbjct: 245 MMLHMLNG 252
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGA--------AY---DTATQQNVAIKKLSRPFQNVTH 104
+LP H+ R+ S LGAGA AY + VA+K L +P ++T
Sbjct: 27 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTE 85
Query: 105 AKRAYREFKLMK-LVNHKNIIGLLNAFT---PQKSLEEF-------------QDVYLVME 147
+ E K++ L NH NI+ LL A T P + E+ +D ++ +
Sbjct: 86 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 145
Query: 148 LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
A + + +S+ YQ+ G+ L S IHRDL NI++ KI D
Sbjct: 146 TSPAIMEDDELALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 204
Query: 208 FGLARTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIR-GG 260
FGLAR + YVV R APE I Y D+WS G + E+ G
Sbjct: 205 FGLARDIKND---SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 261
Query: 261 VLFPGTDHIDQWNKII 276
+PG ++ K+I
Sbjct: 262 SPYPGMPVDSKFYKMI 277
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGA--------AY---DTATQQNVAIKKLSRPFQNVTH 104
+LP H+ R+ S LGAGA AY + VA+K L +P ++T
Sbjct: 29 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTE 87
Query: 105 AKRAYREFKLMK-LVNHKNIIGLLNAFT---PQKSLEEF-------------QDVYLVME 147
+ E K++ L NH NI+ LL A T P + E+ +D ++ +
Sbjct: 88 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 147
Query: 148 LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
A + + +S+ YQ+ G+ L S IHRDL NI++ KI D
Sbjct: 148 TSPAIMEDDELALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 206
Query: 208 FGLARTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIR-GG 260
FGLAR + YVV R APE I Y D+WS G + E+ G
Sbjct: 207 FGLARDIKND---SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 263
Query: 261 VLFPGTDHIDQWNKII 276
+PG ++ K+I
Sbjct: 264 SPYPGMPVDSKFYKMI 279
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGA--------AY---DTATQQNVAIKKLSRPFQNVTH 104
+LP H+ R+ S LGAGA AY + VA+K L +P ++T
Sbjct: 34 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTE 92
Query: 105 AKRAYREFKLMK-LVNHKNIIGLLNAFT---PQKSLEEF-------------QDVYLVME 147
+ E K++ L NH NI+ LL A T P + E+ +D ++ +
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 148 LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
A + + +S+ YQ+ G+ L S IHRDL NI++ KI D
Sbjct: 153 TSPAIMEDDELALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 208 FGLARTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIR-GG 260
FGLAR + YVV R APE I Y D+WS G + E+ G
Sbjct: 212 FGLARDIKND---SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 261 VLFPGTDHIDQWNKII 276
+PG ++ K+I
Sbjct: 269 SPYPGMPVDSKFYKMI 284
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 98/224 (43%), Gaps = 26/224 (11%)
Query: 57 YQELPIS---HQMGKKRHNTSHLGAGAAYDT-ATQQNVAIKKLSRPFQNVTHA-KRAY-R 110
+ E PIS ++MG+ G G Y VA+KKL+ T K+ + +
Sbjct: 27 FDERPISVGGNKMGEG-------GFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM---ELMDANLCQVIQMDLDHERMS 167
E K+M H+N++ LL F+ ++ VY+ M L+D C L
Sbjct: 80 EIKVMAKCQHENLVELL-GFSSDG--DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 136
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYV 224
+ GI LH IHRD+K +NI++ T KI DFGLAR + T M V
Sbjct: 137 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIV 196
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T Y APE + G DI+S G ++ E+I G P D
Sbjct: 197 GTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG---LPAVDE 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGA--------AY---DTATQQNVAIKKLSRPFQNVTH 104
+LP H+ R+ S LGAGA AY + VA+K L +P ++T
Sbjct: 11 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTE 69
Query: 105 AKRAYREFKLMK-LVNHKNIIGLLNAFT---PQKSLEEF-------------QDVYLVME 147
+ E K++ L NH NI+ LL A T P + E+ +D ++ +
Sbjct: 70 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 129
Query: 148 LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
A + + +S+ YQ+ G+ L S IHRDL NI++ KI D
Sbjct: 130 TSPAIMEDDELALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188
Query: 208 FGLARTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIR-GG 260
FGLAR + YVV R APE I Y D+WS G + E+ G
Sbjct: 189 FGLARDIKND---SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 261 VLFPGTDHIDQWNKII 276
+PG ++ K+I
Sbjct: 246 SPYPGMPVDSKFYKMI 261
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 27/124 (21%)
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVV------KSDCT-------------------LKIL 206
++L + +L + H DLKP NI++ KS T +K++
Sbjct: 145 EILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI 204
Query: 207 DFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGT 266
DFG A T + + + + TR YRAPEVIL +G+ + D+WS GC++ E+ G +LF
Sbjct: 205 DFGCA-TFKSDYHGS-IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262
Query: 267 DHID 270
+H++
Sbjct: 263 EHME 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W L +++L + Q+G+ G A +T VA+K AK
Sbjct: 107 DKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTL----VAVKSCRETLPPDLKAK-FL 160
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSY 168
+E +++K +H NI+ L+ T + Q +Y+VMEL+ + ++ + R+
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQK------QPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 169 LLYQML----CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTP-- 222
LL QM+ G+++L S IHRDL N +V LKI DFG++R
Sbjct: 215 LL-QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGG 273
Query: 223 -YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
V + APE + Y D+WS G ++ E G
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W L +++L + Q+G+ G A +T VA+K AK
Sbjct: 107 DKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTL----VAVKSCRETLPPDLKAK-FL 160
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSY 168
+E +++K +H NI+ L+ T + Q +Y+VMEL+ + ++ + R+
Sbjct: 161 QEARILKQYSHPNIVRLIGVCTQK------QPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 169 LLYQML----CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTTFMMTPY 223
LL QM+ G+++L S IHRDL N +V LKI DFG++R A + +
Sbjct: 215 LL-QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGG 273
Query: 224 V--VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
+ V + APE + Y D+WS G ++ E G
Sbjct: 274 LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
I++LHS I HRD+KP N++ S + LK+ DFG A+ + +T T YY AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
Query: 233 EVILGMGYKENVDIWSVGCI 252
EV+ Y ++ D WS+G I
Sbjct: 233 EVLGPEKYDKSCDXWSLGVI 252
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGA--------AY---DTATQQNVAIKKLSRPFQNVTH 104
+LP H+ R+ S LGAGA AY + VA+K L +P ++T
Sbjct: 34 QLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML-KPSAHLTE 92
Query: 105 AKRAYREFKLMK-LVNHKNIIGLLNAFT---PQKSLEEF-------------QDVYLVME 147
+ E K++ L NH NI+ LL A T P + E+ +D ++ +
Sbjct: 93 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK 152
Query: 148 LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
A + + +S+ YQ+ G+ L S IHRDL NI++ KI D
Sbjct: 153 TSPAIMEDDELALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 211
Query: 208 FGLARTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIR-GG 260
FGLAR + YVV R APE I Y D+WS G + E+ G
Sbjct: 212 FGLARHIKND---SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 268
Query: 261 VLFPGTDHIDQWNKII 276
+PG ++ K+I
Sbjct: 269 SPYPGMPVDSKFYKMI 284
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 9/200 (4%)
Query: 83 DTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
D T++ VA+K + R + RE + + H NI+ L +
Sbjct: 41 DKLTKELVAVKYIER---GAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
Query: 143 YLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
EL + +C + D R + Q+L G+ + HS I HRDLK N ++
Sbjct: 98 ASGGELYE-RICNAGRFSEDEAR--FFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA 154
Query: 203 --LKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENV-DIWSVGCIMGEMIRG 259
LKI DFG ++++ V T Y APEV+L Y + D+WS G + M+ G
Sbjct: 155 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
Query: 260 GVLFPGTDHIDQWNKIIGKM 279
F + + K I ++
Sbjct: 215 AYPFEDPEEPRDYRKTIQRI 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 161 LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
+R + +++ + +LHS +++RDLK N+++ D +KI DFGL + G
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 305 T--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 354
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 161 LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
+R + +++ + +LHS +++RDLK N+++ D +KI DFGL + G
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 307
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 308 T--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 357
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 141 DVYLVMELMDANLCQVIQMDLDHER------MSYLLYQMLCGIKHLHSA-GIIHRDLKPS 193
DV++ MELMD +L + + +D + + + ++ ++HLHS +IHRD+KPS
Sbjct: 124 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 183
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSV 249
N+++ + +K+ DFG++ + T + Y APE I GY DIWS+
Sbjct: 184 NVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 243
Query: 250 GCIMGEM 256
G M E+
Sbjct: 244 GITMIEL 250
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 75 HLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLV-NHKNIIGLLNAFTPQ 133
H G + + A + + V A R RE +++ V H +II L++++
Sbjct: 115 HRATGHEFAVKIMEVTAERLSPEQLEEVREATR--RETHILRQVAGHPHIITLIDSY--- 169
Query: 134 KSLEEFQDVYLVMELM-DANLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
E ++LV +LM L + ++ L + ++ +L + LH+ I+HRDL
Sbjct: 170 ---ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDL 226
Query: 191 KPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGM------GYKENV 244
KP NI++ + +++ DFG + + T Y APE++ GY + V
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 245 DIWSVGCIMGEMIRGGVLF 263
D+W+ G I+ ++ G F
Sbjct: 287 DLWACGVILFTLLAGSPPF 305
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1 MLVIDPEKRISVDDALMHPYI 21
+L +DPE R++ + AL HP+
Sbjct: 343 LLQVDPEARLTAEQALQHPFF 363
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
VAIK L V + ++ R+F +M +H N++ L T K V +V
Sbjct: 74 VAIKTL-----KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKP------VMIV 122
Query: 146 MELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSDC 201
+E M+ D + L ML GI ++L G +HRDL NI+V S+
Sbjct: 123 IEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNL 182
Query: 202 TLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
K+ DFGL+R + T + + APE I + D+WS G +M E++
Sbjct: 183 VCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
Query: 258 RGG 260
G
Sbjct: 243 SYG 245
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
VAIK L V + ++ R+F +M +H NII L T K V +V
Sbjct: 53 VAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKP------VMIV 101
Query: 146 MELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSDC 201
E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 102 TEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNL 161
Query: 202 TLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
K+ DFGL+R + + + APE I + D+WS G +M E++
Sbjct: 162 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
Query: 258 RGG 260
G
Sbjct: 222 SYG 224
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 161 LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
+R + +++ + +LHS +++RDLK N+++ D +KI DFGL + G
Sbjct: 107 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 166
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 167 T--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 161 LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
+R + +++ + +LHS +++RDLK N+++ D +KI DFGL + G
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 165
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 166 T--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 215
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 161 LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GT 216
+R + +++ + +LHS +++RDLK N+++ D +KI DFGL + G
Sbjct: 105 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 164
Query: 217 TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDH 268
T M + T Y APEV+ Y VD W +G +M EM+ G + F DH
Sbjct: 165 T--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLL 170
M+ +H +I+ L+ T V+++MEL + QV + LD +
Sbjct: 445 MRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTTFMMTPYVVTRY 228
YQ+ + +L S +HRD+ N++V S+ +K+ DFGL+R T + + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTDHIDQWNKIIGKM 279
+ APE I + D+W G M E++ GV F G + N +IG++
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRI 605
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 14/229 (6%)
Query: 59 ELPISHQMGK----KRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 113
+LPI H + K + + G A D + + VA+K + R + + KR E
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKR---EII 67
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
+ + H NI+ L + EL + +C + D R + Q+
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEAR--FFFQQL 124
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTTFMMTPYVVTRYYRA 231
+ G+ + H+ + HRDLK N ++ LKI DFG ++++ V T Y A
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 232 PEVILGMGYKENV-DIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
PEV+L Y V D+WS G + M+ G F + + K I ++
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 5/106 (4%)
Query: 162 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTTFM 219
+HE Y+ +++ ++HLH GII+RD+K NI++ S+ + + DFGL++ A T
Sbjct: 158 EHEVQIYV-GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER 216
Query: 220 MTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIRGGVLF 263
+ T Y AP+++ G G+ + VD WS+G +M E++ G F
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K+ PF+ R KL ++ +H+ + +++ EE +YL EL
Sbjct: 86 AVKRSMSPFRGPKDRAR-----KLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG 140
Query: 151 ANL---CQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 207
+L C+ L ++ L L + HLHS G++H D+KP+NI + K+ D
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGD 200
Query: 208 FGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
FGL GT Y APE++ G Y D++S+G + E+
Sbjct: 201 FGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEV 248
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 129 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V T Y PE I M +EN
Sbjct: 188 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF 267
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 308 DPKQRISIPELLAHPYVQI 326
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 97/223 (43%), Gaps = 26/223 (11%)
Query: 57 YQELPIS---HQMGKKRHNTSHLGAGAAYDT-ATQQNVAIKKLSRPFQNVTHA-KRAY-R 110
+ E PIS ++MG+ G G Y VA+KKL+ T K+ + +
Sbjct: 21 FDERPISVGGNKMGEG-------GFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 73
Query: 111 EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM---ELMDANLCQVIQMDLDHERMS 167
E K+M H+N++ LL F+ ++ VY+ M L+D C L
Sbjct: 74 EIKVMAKCQHENLVELL-GFSSDG--DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRC 130
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYV 224
+ GI LH IHRD+K +NI++ T KI DFGLAR + M V
Sbjct: 131 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIV 190
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
T Y APE + G DI+S G ++ E+I G P D
Sbjct: 191 GTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITG---LPAVD 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 129 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V T Y PE I M +EN
Sbjct: 188 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF 267
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 308 DPKQRISIPELLAHPYVQI 326
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 82 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 140
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V T Y PE I M +EN
Sbjct: 141 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 199
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 200 KSDVWSLGCILYYMTYGKTPF 220
Score = 28.1 bits (61), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 261 DPKQRISIPELLAHPYVQI 279
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 26/179 (14%)
Query: 107 RAYREFK-LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME-LMDANLCQVIQMD--LD 162
R +RE + L + +KNI+ L+ F E+ YLV E L ++ IQ +
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFF------EDDTRFYLVFEKLQGGSILAHIQKQKHFN 109
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CTLKILDF----GLARTAG 215
S ++ + + LH+ GI HRDLKP NI+ +S +KI DF G+
Sbjct: 110 EREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS 169
Query: 216 TTFMMTPYVVT----RYYRAPEVI-----LGMGYKENVDIWSVGCIMGEMIRGGVLFPG 265
T + TP + T Y APEV+ Y + D+WS+G ++ M+ G F G
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 47 HTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAK 106
H + Q++E + L Q+GK + + T + VA+KKL + H +
Sbjct: 20 HNMTQFEE---RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLR 74
Query: 107 RAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLD 162
RE +++K + H NI+ +++ L+ME + + Q + +D
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTF 218
H ++ Q+ G+++L + IHRDL NI+V+++ +KI DFGL +
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
+ P ++ APE + + D+WS G ++ E+
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 88/187 (47%), Gaps = 24/187 (12%)
Query: 108 AYREFKLMKLVN-HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVI-QMDLDHER 165
A RE +L++ + H N+I F +K +FQ Y+ +EL A L + + Q D H
Sbjct: 64 ADREVQLLRESDEHPNVI---RYFCTEKD-RQFQ--YIAIELCAATLQEYVEQKDFAHLG 117
Query: 166 MS--YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTAGT-- 216
+ LL Q G+ HLHS I+HRDLKP NI++ I DFGL +
Sbjct: 118 LEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 217 -TFMMTPYVV-TRYYRAPEVILGMGYKEN----VDIWSVGCIMGEMIRGGVLFPGTDHID 270
+F V T + APE +L KEN VDI+S GC+ +I G G
Sbjct: 178 HSFSRRSGVPGTEGWIAPE-MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236
Query: 271 QWNKIIG 277
Q N ++G
Sbjct: 237 QANILLG 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 47 HTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAK 106
H + Q++E + L Q+GK + + T + VA+KKL + H +
Sbjct: 20 HNMTQFEE---RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLR 74
Query: 107 RAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLD 162
RE +++K + H NI+ +++ L+ME + + Q + +D
Sbjct: 75 DFEREIEILKSLQHDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTF 218
H ++ Q+ G+++L + IHRDL NI+V+++ +KI DFGL +
Sbjct: 131 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
+ P ++ APE + + D+WS G ++ E+
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 101 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 159
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V T Y PE I M +EN
Sbjct: 160 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 219 KSDVWSLGCILYYMTYGKTPF 239
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 280 DPKQRISIPELLAHPYVQI 298
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 85 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 143
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V T Y PE I M +EN
Sbjct: 144 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 202
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 203 KSDVWSLGCILYYMTYGKTPF 223
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 264 DPKQRISIPELLAHPYVQI 282
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+ +N A+ + +N T ++ +E M+ +H +I+ L+ T V
Sbjct: 30 SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-------V 82
Query: 143 YLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+++MEL + QV + LD + YQ+ + +L S +HRD+ N++V
Sbjct: 83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 142
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
S+ +K+ DFGL+R T + + + + APE I + D+W G M E+
Sbjct: 143 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 202
Query: 257 IRGGVL-FPGTDHIDQWNKIIGKM 279
+ GV F G + N +IG++
Sbjct: 203 LMHGVKPFQGVKN----NDVIGRI 222
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY-- 223
M + +++ G++H+H+ +++RDLKP+NI++ ++I D GLA P+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHAS 350
Query: 224 VVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRG 259
V T Y APEV+ G+ Y + D +S+GC++ +++RG
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY-- 223
M + +++ G++H+H+ +++RDLKP+NI++ ++I D GLA P+
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHAS 349
Query: 224 VVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRG 259
V T Y APEV+ G+ Y + D +S+GC++ +++RG
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY-- 223
M + +++ G++H+H+ +++RDLKP+NI++ ++I D GLA P+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHAS 350
Query: 224 VVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRG 259
V T Y APEV+ G+ Y + D +S+GC++ +++RG
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 6/97 (6%)
Query: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPY-- 223
M + +++ G++H+H+ +++RDLKP+NI++ ++I D GLA P+
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHAS 350
Query: 224 VVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMIRG 259
V T Y APEV+ G+ Y + D +S+GC++ +++RG
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+ +N A+ + +N T ++ +E M+ +H +I+ L+ T V
Sbjct: 35 SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-------V 87
Query: 143 YLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+++MEL + QV + LD + YQ+ + +L S +HRD+ N++V
Sbjct: 88 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 147
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
S+ +K+ DFGL+R T + + + + APE I + D+W G M E+
Sbjct: 148 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 207
Query: 257 IRGGVL-FPGTDHIDQWNKIIGKM 279
+ GV F G + N +IG++
Sbjct: 208 LMHGVKPFQGVKN----NDVIGRI 227
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 72
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM---DLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + +L + +Q +DH ++ Q+
Sbjct: 73 HDNIVKYKGVCYSAGR----RNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 38/236 (16%)
Query: 36 GPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKL 95
GP D ++ E H L Q+GK + L T VA+K+L
Sbjct: 1 GPQDPTIFEERH------------LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL 48
Query: 96 --SRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN-AFTPQKSLEEFQDVYLVMELMDA- 151
S P Q + RE +++K ++ I+ ++ P + Q + LVME + +
Sbjct: 49 QHSGPDQQ----RDFQREIQILKALHSDFIVKYRGVSYGPGR-----QSLRLVMEYLPSG 99
Query: 152 ---NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 208
+ Q + LD R+ Q+ G+++L S +HRDL NI+V+S+ +KI DF
Sbjct: 100 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF 159
Query: 209 GLARTAGTTFMMTPYVVTR-------YYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
GLA+ + Y V R ++ APE + + D+WS G ++ E+
Sbjct: 160 GLAKLLP---LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+ +N A+ + +N T ++ +E M+ +H +I+ L+ T V
Sbjct: 36 SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-------V 88
Query: 143 YLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+++MEL + QV + LD + YQ+ + +L S +HRD+ N++V
Sbjct: 89 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 148
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
S+ +K+ DFGL+R T + + + + APE I + D+W G M E+
Sbjct: 149 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 208
Query: 257 IRGGVL-FPGTDHIDQWNKIIGKM 279
+ GV F G + N +IG++
Sbjct: 209 LMHGVKPFQGVKN----NDVIGRI 228
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
AIK LSR + + RE LM+ +NH N++ L+ P + L L+ +
Sbjct: 51 QCAIKSLSR-ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV----LLPYM 105
Query: 149 MDANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
+L Q I+ + + L+ Q+ G+++L +HRDL N ++ T+K+
Sbjct: 106 CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKV 165
Query: 206 LDFGLARTAGTTFMMTPYVVT--RYYRAP------EVILGMGYKENVDIWSVGCIMGEMI 257
DFGLAR Y V R+ R P E + + D+WS G ++ E++
Sbjct: 166 ADFGLAR---DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 258 RGGVLFPGTDHIDQWN 273
G P HID ++
Sbjct: 223 TRGA--PPYRHIDPFD 236
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+ +N A+ + +N T ++ +E M+ +H +I+ L+ T V
Sbjct: 33 SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-------V 85
Query: 143 YLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+++MEL + QV + LD + YQ+ + +L S +HRD+ N++V
Sbjct: 86 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 145
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
S+ +K+ DFGL+R T + + + + APE I + D+W G M E+
Sbjct: 146 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
Query: 257 IRGGVL-FPGTDHIDQWNKIIGKM 279
+ GV F G + N +IG++
Sbjct: 206 LMHGVKPFQGVKN----NDVIGRI 225
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGLAR + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+ +N A+ + +N T ++ +E M+ +H +I+ L+ T V
Sbjct: 38 SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-------V 90
Query: 143 YLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+++MEL + QV + LD + YQ+ + +L S +HRD+ N++V
Sbjct: 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 150
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
S+ +K+ DFGL+R T + + + + APE I + D+W G M E+
Sbjct: 151 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 210
Query: 257 IRGGVL-FPGTDHIDQWNKIIGKM 279
+ GV F G + N +IG++
Sbjct: 211 LMHGVKPFQGVKN----NDVIGRI 230
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 14/229 (6%)
Query: 59 ELPISHQMGK----KRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 113
+LPI H + K + + G A D + + VA+K + R + + KR E
Sbjct: 10 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR---EII 66
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
+ + H NI+ L + EL + +C + D R + Q+
Sbjct: 67 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEAR--FFFQQL 123
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTTFMMTPYVVTRYYRA 231
+ G+ + H+ + HRDLK N ++ LKI DFG ++++ V T Y A
Sbjct: 124 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 183
Query: 232 PEVILGMGYKENV-DIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
PEV+L Y V D+WS G + M+ G F + + K I ++
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 81 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 139
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V T Y PE I M +EN
Sbjct: 140 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 198
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 199 KSDVWSLGCILYYMTYGKTPF 219
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 260 DPKQRISIPELLAHPYVQI 278
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLL 170
M+ +H +I+ L+ T V+++MEL + QV + LD +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTTFMMTPYVVTRY 228
YQ+ + +L S +HRD+ N++V S+ +K+ DFGL+R T + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTDHIDQWNKIIGKM 279
+ APE I + D+W G M E++ GV F G + N +IG++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRI 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 21/208 (10%)
Query: 86 TQQNVAIKKLSRPFQNVTH---AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV 142
+ +N A+ + +N T ++ +E M+ +H +I+ L+ T V
Sbjct: 61 SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENP-------V 113
Query: 143 YLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+++MEL + QV + LD + YQ+ + +L S +HRD+ N++V
Sbjct: 114 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS 173
Query: 199 SDCTLKILDFGLAR--TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
S+ +K+ DFGL+R T + + + + APE I + D+W G M E+
Sbjct: 174 SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 233
Query: 257 IRGGVL-FPGTDHIDQWNKIIGKMREAH 283
+ GV F G + N +IG++
Sbjct: 234 LMHGVKPFQGVKN----NDVIGRIENGE 257
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 33/203 (16%)
Query: 76 LGAG-------AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
LGAG A Y+ T+ VA+K + +P A A E +MK + H ++ L
Sbjct: 190 LGAGQFGEVWMATYNKHTK--VAVKTM-KPGSMSVEAFLA--EANVMKTLQHDKLVKLHA 244
Query: 129 AFTPQKSLEEFQDVYLVMELM-DANLCQVIQMDLDHE----RMSYLLYQMLCGIKHLHSA 183
T + +Y++ E M +L ++ D + ++ Q+ G+ +
Sbjct: 245 VVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 297
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKEN 243
IHRDL+ +NI+V + KI DFGLAR G F + + APE I +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARV-GAKFPIK-------WTAPEAINFGSFTIK 349
Query: 244 VDIWSVGCIMGEMIR-GGVLFPG 265
D+WS G ++ E++ G + +PG
Sbjct: 350 SDVWSFGILLMEIVTYGRIPYPG 372
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLL 170
M+ +H +I+ L+ T V+++MEL + QV + LD +
Sbjct: 445 MRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTTFMMTPYVVTRY 228
YQ+ + +L S +HRD+ N++V + +K+ DFGL+R T + + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTDHIDQWNKIIGKM 279
+ APE I + D+W G M E++ GV F G + N +IG++
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRI 605
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 65 QMGKKRHNTSHLGAGAAYDTATQQNVAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKN 122
Q+GK + L T VA+K+L S P Q + RE +++K ++
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDF 72
Query: 123 IIGLLN-AFTPQKSLEEFQDVYLVMELMDA----NLCQVIQMDLDHERMSYLLYQMLCGI 177
I+ ++ P + Q + LVME + + + Q + LD R+ Q+ G+
Sbjct: 73 IVKYRGVSYGPGR-----QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTR-------YYR 230
++L S +HRDL NI+V+S+ +KI DFGLA+ + Y V R ++
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY 184
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMI 257
APE + + D+WS G ++ E+
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 30/200 (15%)
Query: 81 AYDTATQQNVAIKKLSRPFQNVTHAKRAY-REFKLMK-LVNHKNIIGLLNAFTPQKSLEE 138
A D + + A+K+L N RA +E MK L H NI+ +A + K +
Sbjct: 47 AQDVGSGREYALKRL---LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103
Query: 139 F--QDVYLVMELMDANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLH--SAGIIHRD 189
+ L+ EL L + ++ L + + + YQ ++H+H IIHRD
Sbjct: 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD 163
Query: 190 LKPSNIVVKSDCTLKILDFGLART---------AGTTFMMTPYVVTR----YYRAPEVI- 235
LK N+++ + T+K+ DFG A T + + +TR YR PE+I
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223
Query: 236 --LGMGYKENVDIWSVGCIM 253
E DIW++GCI+
Sbjct: 224 LYSNFPIGEKQDIWALGCIL 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLL 170
M+ +H +I+ L+ T V+++MEL + QV + LD +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTTFMMTPYVVTRY 228
YQ+ + +L S +HRD+ N++V S+ +K+ DFGL+R T + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTDHIDQWNKIIGKM 279
+ APE I + D+W G M E++ GV F G + N +IG++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRI 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 65 QMGKKRHNTSHLGAGAAYDTATQQNVAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKN 122
Q+GK + L T VA+K+L S P Q + RE +++K ++
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDF 85
Query: 123 IIGLLN-AFTPQKSLEEFQDVYLVMELMDA----NLCQVIQMDLDHERMSYLLYQMLCGI 177
I+ ++ P + Q + LVME + + + Q + LD R+ Q+ G+
Sbjct: 86 IVKYRGVSYGPGR-----QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTR-------YYR 230
++L S +HRDL NI+V+S+ +KI DFGLA+ + Y V R ++
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVREPGQSPIFWY 197
Query: 231 APEVILGMGYKENVDIWSVGCIMGEMI 257
APE + + D+WS G ++ E+
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
VAIK L + +R R+F +M +H NII L T + +V
Sbjct: 80 VAIKAL-----KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL------AMIV 128
Query: 146 MELMDANLCQVIQMDLDHERMSYLLYQML----CGIKHLHSAGIIHRDLKPSNIVVKSDC 201
E M+ D + L ML G+++L G +HRDL N++V S+
Sbjct: 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL 188
Query: 202 TLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 257
K+ DFGL+R + T + + APE I + D+WS G +M E++
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
Query: 258 RGG 260
G
Sbjct: 249 AYG 251
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 129 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 187
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + T+ + V Y PE I M +EN
Sbjct: 188 I-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 247 KSDVWSLGCILYYMTYGKTPF 267
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 308 DPKQRISIPELLAHPYVQI 326
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 141 DVYLVMELMDANLCQ-------VIQMDLDHERMSYLLYQMLCGIKHL-HSAGIIHRDLKP 192
D ++ MELM + + V+ + E + + + + HL + IIHRD+KP
Sbjct: 95 DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKP 154
Query: 193 SNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVI----LGMGYKENVDIWS 248
SNI++ +K+ DFG++ + T R Y APE I GY D+WS
Sbjct: 155 SNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWS 214
Query: 249 VGCIMGEMIRGGVLFPGTDHIDQWNKIIGKMRE 281
+G + E+ G +P +WN + ++ +
Sbjct: 215 LGITLYELATGRFPYP------KWNSVFDQLTQ 241
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 90 VAIKKLSRPFQNVTHAKRA--YREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T +R E +M +H NII L + + +++ + ++ E
Sbjct: 76 VAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRL------EGVISKYKPMMIITE 126
Query: 148 LMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSDCTL 203
M+ + D E L ML GI K+L + +HRDL NI+V S+
Sbjct: 127 YMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVC 186
Query: 204 KILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
K+ DFGL+R T+ + + + APE I + D+WS G +M E++
Sbjct: 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY 246
Query: 260 G 260
G
Sbjct: 247 G 247
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 72
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 73 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 24 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 83
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 84 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 135
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 136 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 188
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 226
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 74
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 75 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELF 216
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 27 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 86
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 87 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 138
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 191
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 67
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 68 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELF 209
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 72
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q +DH ++ Q+
Sbjct: 73 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 68
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 69 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELF 210
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 22 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 81
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 133
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 134 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 186
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 73 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 121
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 122 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 181
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
Query: 257 IRGG 260
+ G
Sbjct: 242 MSYG 245
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL---KILDFGLARTAGTTFMMTPYVV 225
L+ Q+L G+ +LH I+H DLKP NI++ S L KI+DFG++R G + +
Sbjct: 136 LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMG 195
Query: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T Y APE++ D+W++G I ++ F G D+ + + I
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI 245
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 22 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 81
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 133
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 186
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 75
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 76 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 73
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 74 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELF 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 27 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 86
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 87 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 138
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 139 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 191
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 229
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 76
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 77 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 69
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 70 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 50 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 109
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 110 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 161
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 162 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 214
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 32/254 (12%)
Query: 37 PYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVAIKKL 95
P D + + +W E L + +G+ D TAT + VA+K L
Sbjct: 7 PLDEHCERLPYDASKW-EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 65
Query: 96 SRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQ-----DVY 143
+ TH++ RA E K L+ + +H N++ LL A T P + EF Y
Sbjct: 66 K---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 144 LVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
L + + +V DL D + +L+ +Q+ G++ L S IHRDL NI++
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGYKENVDIWSVGCI 252
+KI DFGLAR + YV + + APE I Y D+WS G +
Sbjct: 183 EKNVVKICDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 253 MGEMIR-GGVLFPG 265
+ E+ G +PG
Sbjct: 240 LWEIFSLGASPYPG 253
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 100
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 101 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELF 242
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 37 PYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVAIKKL 95
P D + + +W E L + +G+ D TAT + VA+K L
Sbjct: 7 PLDEHCERLPYDASKW-EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 65
Query: 96 SRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQ-----DVY 143
+ TH++ RA E K L+ + +H N++ LL A T P + EF Y
Sbjct: 66 K---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 144 LVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
L + + +V DL D + +L+ +Q+ G++ L S IHRDL NI++
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYVVTR-------YYRAPEVILGMGYKENVDIWSVGC 251
+KI DFGLAR P V + + APE I Y D+WS G
Sbjct: 183 EKNVVKICDFGLAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 252 IMGEMIR-GGVLFPG 265
++ E+ G +PG
Sbjct: 239 LLWEIFSLGASPYPG 253
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 49 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 108
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 109 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 160
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 161 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 213
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 251
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 42 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 101
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 102 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 153
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 154 NIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 206
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 244
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 50 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIV 109
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 110 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 161
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 162 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 214
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 79 GAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFT-PQKSLE 137
G Y +VA+K L+ + E +++ H NI+ + T PQ ++
Sbjct: 22 GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIV 81
Query: 138 ----EFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
E +Y + +++ + +D+ Q G+ +LH+ IIHRDLK +
Sbjct: 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIAR--------QTAQGMDYLHAKSIIHRDLKSN 133
Query: 194 NIVVKSDCTLKILDFGLA-------------RTAGTTFMMTPYVVTRYYRAPEVILGMGY 240
NI + D T+KI DFGLA + +G+ M P V+ + P Y
Sbjct: 134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP-------Y 186
Query: 241 KENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
D+++ G ++ E++ G + + ++ DQ ++G+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 69
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 70 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + + P ++ A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 69
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 70 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTTFMMT--PYVVTRYYRA 231
G+++L + IHRDL NI+V+++ +KI DFGL + F P ++ A
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 84 TATQQNVAIKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSL 136
TAT + VA+K L + TH++ RA E K L+ + +H N++ LL A T P +
Sbjct: 45 TATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 137 EEFQ-----DVYLVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGII 186
EF YL + + +V DL D + +L+ +Q+ G++ L S I
Sbjct: 102 TEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 161
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGY 240
HRDL NI++ +KI DFGLAR + YV + + APE I Y
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 241 KENVDIWSVGCIMGEMIR-GGVLFPG 265
D+WS G ++ E+ G +PG
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 84 TATQQNVAIKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSL 136
TAT + VA+K L + TH++ RA E K L+ + +H N++ LL A T P +
Sbjct: 45 TATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 137 EEFQ-----DVYLVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGII 186
EF YL + + +V DL D + +L+ +Q+ G++ L S I
Sbjct: 102 TEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 161
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTR-------YYRAPEVILGMG 239
HRDL NI++ +KI DFGLAR P V + + APE I
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 240 YKENVDIWSVGCIMGEMIR-GGVLFPG 265
Y D+WS G ++ E+ G +PG
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 108/255 (42%), Gaps = 34/255 (13%)
Query: 37 PYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVAIKKL 95
P D + + +W E L + +G+ D TAT + VA+K L
Sbjct: 7 PLDEHCERLPYDASKW-EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 65
Query: 96 SRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQ-----DVY 143
+ TH++ RA E K L+ + +H N++ LL A T P + EF Y
Sbjct: 66 K---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 144 LVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
L + + +V DL D + +L+ +Q+ G++ L S IHRDL NI++
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYVVTR-------YYRAPEVILGMGYKENVDIWSVGC 251
+KI DFGLAR P V + + APE I Y D+WS G
Sbjct: 183 EKNVVKICDFGLAR----DIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 252 IMGEMIR-GGVLFPG 265
++ E+ G +PG
Sbjct: 239 LLWEIFSLGASPYPG 253
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 116/271 (42%), Gaps = 38/271 (14%)
Query: 20 YINVWFDDAEVHAPAPGPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAG 79
Y+++ D E+ P D + + +W E L + +G+
Sbjct: 33 YLSIVMDPDEL------PLDEHCERLPYDASKW-EFPRDRLKLGKPLGRGAFGQVIEADA 85
Query: 80 AAYD-TATQQNVAIKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT---- 131
D TAT + VA+K L + TH++ RA E K L+ + +H N++ LL A T
Sbjct: 86 FGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142
Query: 132 PQKSLEEFQ-----DVYLVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLH 181
P + EF YL + + +V DL D + +L+ +Q+ G++ L
Sbjct: 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 202
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVI 235
S IHRDL NI++ +KI DFGLAR + YV + + APE I
Sbjct: 203 SRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETI 259
Query: 236 LGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
Y D+WS G ++ E+ G +PG
Sbjct: 260 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 84 TATQQNVAIKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSL 136
TAT + VA+K L + TH++ RA E K L+ + +H N++ LL A T P +
Sbjct: 45 TATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 137 EEFQ-----DVYLVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGII 186
EF YL + + +V DL D + +L+ +Q+ G++ L S I
Sbjct: 102 TEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 161
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGY 240
HRDL NI++ +KI DFGLAR + YV + + APE I Y
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
Query: 241 KENVDIWSVGCIMGEMIR-GGVLFPG 265
D+WS G ++ E+ G +PG
Sbjct: 219 TIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 20 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 79
Query: 128 NAFTPQKSLEEFQDVYLVMELMDA--NLCQVI--QMDLDHERMSYLLYQMLCGIKHLHSA 183
+ F S L++E M+ +L I + L E +Q+L ++H H+
Sbjct: 80 DWFERPDSF------VLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 184 GIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGY-K 241
G++HRD+K NI++ + LK++DFG T + T + TR Y PE I Y
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 242 ENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
+ +WS+G ++ +M+ G + F + I
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEI 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 16/230 (6%)
Query: 59 ELPISHQMGKKRHNTSHLGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 112
+LPI H + +GAG D + VA+K + R + + KR E
Sbjct: 11 DLPIMHD-SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKR---EI 66
Query: 113 KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQ 172
+ + H NI+ L + EL + +C + D R + Q
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEAR--FFFQQ 123
Query: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTTFMMTPYVVTRYYR 230
++ G+ + H+ + HRDLK N ++ LKI DFG ++ + V T Y
Sbjct: 124 LISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYI 183
Query: 231 APEVILGMGYKENV-DIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
APEV+L Y V D+WS G + M+ G F + + K I ++
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 115 MKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLL 170
M+ +H +I+ L+ T V+++MEL + QV + LD +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-------VWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTTFMMTPYVVTRY 228
YQ+ + +L S +HRD+ N++V + +K+ DFGL+R T + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVL-FPGTDHIDQWNKIIGKM 279
+ APE I + D+W G M E++ GV F G + N +IG++
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRI 225
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 77/184 (41%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 75 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 123
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 183
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL R + + + +PE I + D+WS G ++ E+
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 257 IRGG 260
+ G
Sbjct: 244 MSYG 247
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 46 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 94
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 95 VTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 154
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 257 IRGG 260
+ G
Sbjct: 215 MSYG 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 141 DVYLVMELMDANLCQVIQMDLD------HERMSYLLYQMLCGIKHLHSA-GIIHRDLKPS 193
DV++ MELMD +L + + +D + + + ++ ++HLHS +IHRD+KPS
Sbjct: 80 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 139
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSV 249
N+++ + +K+ DFG++ + Y APE I GY DIWS+
Sbjct: 140 NVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199
Query: 250 GCIMGEM 256
G M E+
Sbjct: 200 GITMIEL 206
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 46 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 94
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 95 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 154
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 257 IRGG 260
+ G
Sbjct: 215 MSYG 218
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 87 QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FTPQK 134
+ + AIK++ H A L KL +H NII LL A + P
Sbjct: 42 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 101
Query: 135 SLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
+L +F V+E A + L +++ + + G+ +L IHRDL
Sbjct: 102 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 161
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
NI+V + KI DFGL+R T + + A E + Y N D+WS G ++
Sbjct: 162 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 221
Query: 254 GEMIR-GGVLFPGTDHIDQWNKI 275
E++ GG + G + + K+
Sbjct: 222 WEIVSLGGTPYCGMTCAELYEKL 244
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 75 HLGAGAA-------YDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLL 127
LGAG A Y+ T+ VA+K L Q E LMK + H+ ++ L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTK--VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 128 NAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHERMSYLLYQMLCGIKHLHS 182
T + +Y++ E M+ +L ++ + L ++ + Q+ G+ +
Sbjct: 75 AVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPE 233
IHRDL+ +NI+V + KI DFGLAR TA G F + + APE
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK-------WTAPE 180
Query: 234 VILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
I + D+WS G ++ E++ G + +PG
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 65 QMGKKRHNTSHLGAGAAYDTATQQNVAIKKL--SRPFQNVTHAKRAYREFKLMKLVNHKN 122
Q+GK + L T VA+K+L S P Q + RE +++K ++
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ----RDFQREIQILKALHSDF 69
Query: 123 IIGLLN-AFTPQKSLEEFQDVYLVMELMDA----NLCQVIQMDLDHERMSYLLYQMLCGI 177
I+ ++ P + ++ LVME + + + Q + LD R+ Q+ G+
Sbjct: 70 IVKYRGVSYGPGRP-----ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 178 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART----AGTTFMMTPYVVTRYYRAPE 233
++L S +HRDL NI+V+S+ +KI DFGLA+ + P ++ APE
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 234 VILGMGYKENVDIWSVGCIMGEMI 257
+ + D+WS G ++ E+
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 12 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 62
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 176 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 8 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 58
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 111
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 112 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 171
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 172 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYL 144
+VAIK L V + ++ R+F +M +H NII L T K V +
Sbjct: 63 SVAIKTL-----KVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP------VMI 111
Query: 145 VMELMDANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSD 200
V E M+ D + L ML GI K+L G +HRDL NI++ S+
Sbjct: 112 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN 171
Query: 201 CTLKILDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R + + + +PE I + D+WS G ++ E+
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 257 IRGG 260
+ G
Sbjct: 232 MSYG 235
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 6 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 56
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 170 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 87 QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FTPQK 134
+ + AIK++ H A L KL +H NII LL A + P
Sbjct: 52 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 111
Query: 135 SLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
+L +F V+E A + L +++ + + G+ +L IHRDL
Sbjct: 112 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 171
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
NI+V + KI DFGL+R T + + A E + Y N D+WS G ++
Sbjct: 172 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231
Query: 254 GEMIR-GGVLFPGTDHIDQWNKI 275
E++ GG + G + + K+
Sbjct: 232 WEIVSLGGTPYCGMTCAELYEKL 254
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 84 TATQQNVAIKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSL 136
TAT + VA+K L + TH++ RA E K L+ + +H N++ LL A T P +
Sbjct: 45 TATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 101
Query: 137 EEFQ-----DVYLVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGII 186
EF YL + + +V DL D + +L+ +Q+ G++ L S I
Sbjct: 102 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 161
Query: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTR-------YYRAPEVILGMG 239
HRDL NI++ +KI DFGLAR P V + + APE I
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRV 217
Query: 240 YKENVDIWSVGCIMGEMIR-GGVLFPG 265
Y D+WS G ++ E+ G +PG
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 11 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 61
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 114
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 115 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 175 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 12 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 62
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 115
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 116 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 176 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 6 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 56
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 170 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 117 LVN--HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQML 174
LVN K I L AF +L D Y+ +L+ L + L E + L +M+
Sbjct: 128 LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL--TLLSKFEDRLPEEMARFYLAEMV 185
Query: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTTFMMTPYVVTRYYRAP 232
I +H +HRD+KP NI++ + +++ DFG L T + V T Y +P
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 245
Query: 233 EVILGMG-----YKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
E++ M Y D WS+G M EM+ G F ++ + KI+
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 14 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 64
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 117
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 118 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 178 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 26/202 (12%)
Query: 84 TATQQNVAIKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSL 136
TAT + VA+K L + TH++ RA E K L+ + +H N++ LL A T P +
Sbjct: 54 TATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110
Query: 137 EEFQDVYLVMELMDANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
EF + + + + + L E + +Q+ G++ L S IHRDL
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDL 170
Query: 191 KPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGYKENV 244
NI++ +KI DFGLAR + YV + + APE I Y
Sbjct: 171 AARNILLSEKNVVKIXDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 227
Query: 245 DIWSVGCIMGEMIR-GGVLFPG 265
D+WS G ++ E+ G +PG
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPG 249
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 16 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 66
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 119
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 120 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 180 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 58/256 (22%)
Query: 76 LGAGAAYDTATQQN-----VAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLNA 129
LG G++ Q + VA+K++ F ++ A E KL+ + +H N+I +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRYYCS 77
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSY--------LLYQMLCGIKHL 180
T + L Y+ +EL + NL +++ ++ E + LL Q+ G+ HL
Sbjct: 78 ETTDRFL------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 181 HSAGIIHRDLKPSNIVVKSDC-----------TLKIL--DFGLAR------TAGTTFMMT 221
HS IIHRDLKP NI+V + L+IL DFGL + ++ T +
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 222 PYVVTRYYRAPEVI-------LGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNK 274
P T +RAPE++ ++DI+S+GC+ ++ G G + + N
Sbjct: 192 P-SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 275 IIG-----KMREAHDK 285
I G +M+ HD+
Sbjct: 251 IRGIFSLDEMKCLHDR 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 6 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 56
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 109
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 170 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 15 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 65
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 118
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 119 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 179 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 7 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 57
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 110
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 111 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 171 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 20/173 (11%)
Query: 106 KRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM------ 159
+ A RE + +L NH NI+ L+ A+ ++ + + L+ L I+
Sbjct: 71 EEAQREADMHRLFNHPNILRLV-AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN 129
Query: 160 DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL--------- 210
L +++ +LL + G++ +H+ G HRDLKP+NI++ + ++D G
Sbjct: 130 FLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189
Query: 211 -ARTAGTTFMMTPYVVTRYYRAPEVILGMGY---KENVDIWSVGCIMGEMIRG 259
+R A T T YRAPE+ + E D+WS+GC++ M+ G
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 17/181 (9%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNII---GLLNAFTPQKSLEEFQDVYLVM 146
VAIK L + + E +M +H N+I G++ TP + EF + +
Sbjct: 64 VAIKTLKSGYTE-KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 147 ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+ N Q + L +L + G+K+L +HRDL NI+V S+ K+
Sbjct: 123 SFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVS 177
Query: 207 DFGLAR-----TAGTTFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
DFGL+R T+ T+ + + R + APE I + D+WS G +M E++
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 236
Query: 260 G 260
G
Sbjct: 237 G 237
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D W E+ + + + ++G + +G Y+ +T+ VA+K L + T + +A+
Sbjct: 6 DAW-EIPRESIKLVKRLGAGQFGEVWMGY---YNNSTK--VAVKTL----KPGTMSVQAF 55
Query: 110 -REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMDLDHE--- 164
E LMK + H ++ L T + + +Y++ E M +L ++ D +
Sbjct: 56 LEEANLMKTLQHDKLVRLYAVVTRE------EPIYIITEYMAKGSLLDFLKSDEGGKVLL 109
Query: 165 -RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---------A 214
++ Q+ G+ ++ IHRDL+ +N++V KI DFGLAR
Sbjct: 110 PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 215 GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGTDHID 270
G F + + APE I + D+WS G ++ E++ G + +PG + D
Sbjct: 170 GAKFPIK-------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 103/253 (40%), Gaps = 32/253 (12%)
Query: 37 PYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVAIKKL 95
P D + + +W E L + +G+ D TAT + VA+K L
Sbjct: 9 PLDEHCERLPYDASKW-EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML 67
Query: 96 SRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQDVYLVMEL 148
+ TH++ RA E K L+ + +H N++ LL A T P + EF +
Sbjct: 68 K---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 124
Query: 149 MDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
+ + + + L E + +Q+ G++ L S IHRDL NI++
Sbjct: 125 LRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK 184
Query: 201 CTLKILDFGLARTAGTTFMMTPYVVTR-------YYRAPEVILGMGYKENVDIWSVGCIM 253
+KI DFGLAR P V + + APE I Y D+WS G ++
Sbjct: 185 NVVKICDFGLAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 240
Query: 254 GEMIR-GGVLFPG 265
E+ G +PG
Sbjct: 241 WEIFSLGASPYPG 253
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 29/186 (15%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLV 145
VAIK L + +R R+F +M +H NII L T + +V
Sbjct: 80 VAIKAL-----KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL------AMIV 128
Query: 146 MELMDANLCQVIQMDLDHERMSYLLYQML----CGIKHLHSAGIIHRDLKPSNIVVKSDC 201
E M+ D + L ML G+++L G +HRDL N++V S+
Sbjct: 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNL 188
Query: 202 TLKILDFGLAR-------TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
K+ DFGL+R A TT T + + APE I + D+WS G +M
Sbjct: 189 VCKVSDFGLSRVLEDDPDAAXTT---TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 255 EMIRGG 260
E++ G
Sbjct: 246 EVLAYG 251
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 105/254 (41%), Gaps = 28/254 (11%)
Query: 33 PAPGPYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVA 91
P P D + + +W E L + +G+ D TAT + VA
Sbjct: 3 PDELPLDEHCERLPYDASKW-EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVA 61
Query: 92 IKKLSRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQDVYL 144
+K L + TH++ RA E K L+ + +H N++ LL A T P + EF
Sbjct: 62 VKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGN 118
Query: 145 VMELMDANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
+ + + + + L E + +Q+ G++ L S IHRDL NI++
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLS 178
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGYKENVDIWSVGCI 252
+KI DFGLAR + YV + + APE I Y D+WS G +
Sbjct: 179 EKNVVKICDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 235
Query: 253 MGEMIR-GGVLFPG 265
+ E+ G +PG
Sbjct: 236 LWEIFSLGASPYPG 249
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAY 109
D+W E+ + L + ++G + +G Y+ T+ VA+K L Q
Sbjct: 1 DEW-EVPRETLKLVERLGAGQFGEVWMGY---YNGHTK--VAVKSLK---QGSMSPDAFL 51
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ----MDLDHE 164
E LMK + H+ ++ L T + +Y++ E M+ +L ++ + L
Sbjct: 52 AEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYMENGSLVDFLKTPSGIKLTIN 104
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
++ + Q+ G+ + IHRDL+ +NI+V + KI DFGLAR TA G
Sbjct: 105 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
F + + APE I + D+WS G ++ E++ G + +PG
Sbjct: 165 AKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 19 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 78
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 79 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 129
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 188
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
Y + +WS+G ++ +M+ G + F + I
Sbjct: 189 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 20 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 79
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 80 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 130
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 189
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 21 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 80
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 81 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 131
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 190
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
Y + +WS+G ++ +M+ G + F + I
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 35 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 94
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 95 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 145
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 204
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 140 QDVYLVMEL--MDANLCQVIQMDLDH-ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV 196
Q +Y+VME +D N + +D ER SY ML + +H GI+H DLKP+N +
Sbjct: 101 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFL 159
Query: 197 VKSDCTLKILDFGLA---RTAGTTFMMTPYVVTRYYRAPEVILGM-GYKEN--------- 243
+ D LK++DFG+A + + V T Y PE I M +EN
Sbjct: 160 I-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 218
Query: 244 -VDIWSVGCIMGEMIRGGVLF 263
D+WS+GCI+ M G F
Sbjct: 219 KSDVWSLGCILYYMTYGKTPF 239
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 5 DPEKRISVDDALMHPYINV 23
DP++RIS+ + L HPY+ +
Sbjct: 280 DPKQRISIPELLAHPYVQI 298
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 35 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 94
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 95 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 145
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 204
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 16 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 76 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 126
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 185
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
Y + +WS+G ++ +M+ G + F + I
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 16 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 76 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 126
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 185
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
Y + +WS+G ++ +M+ G + F + I
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 21 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 80
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 81 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 131
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 190
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 36 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 95
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 96 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 146
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 205
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 52/251 (20%)
Query: 76 LGAGAAYDTATQ-----QNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLNA 129
LG G++ Q + VA+K++ F ++ A E KL+ + +H N+I +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRYYCS 95
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSY--------LLYQMLCGIKHL 180
T + L Y+ +EL + NL +++ ++ E + LL Q+ G+ HL
Sbjct: 96 ETTDRFL------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 181 HSAGIIHRDLKPSNIVVKSDC-----------TLKIL--DFGLAR---TAGTTFM--MTP 222
HS IIHRDLKP NI+V + L+IL DFGL + + F +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 223 YVVTRYYRAPEVILGMGYK---ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG-- 277
T +RAPE++ + ++DI+S+GC+ ++ G G + + N I G
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 269
Query: 278 ---KMREAHDK 285
+M+ HD+
Sbjct: 270 SLDEMKCLHDR 280
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 36 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 95
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 96 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 146
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 205
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 21 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 80
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 81 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 131
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 190
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
Y + +WS+G ++ +M+ G + F + I
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 43 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 102
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 103 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 153
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 212
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 213 YHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 36 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 95
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 96 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 146
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 205
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 52/251 (20%)
Query: 76 LGAGAAYDTATQ-----QNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLNA 129
LG G++ Q + VA+K++ F ++ A E KL+ + +H N+I +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRYYCS 95
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSY--------LLYQMLCGIKHL 180
T + L Y+ +EL + NL +++ ++ E + LL Q+ G+ HL
Sbjct: 96 ETTDRFL------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 181 HSAGIIHRDLKPSNIVVKSDC-----------TLKIL--DFGLAR---TAGTTFM--MTP 222
HS IIHRDLKP NI+V + L+IL DFGL + + F +
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 223 YVVTRYYRAPEVILGMGYK---ENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIG-- 277
T +RAPE++ + ++DI+S+GC+ ++ G G + + N I G
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF 269
Query: 278 ---KMREAHDK 285
+M+ HD+
Sbjct: 270 SLDEMKCLHDR 280
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 28/211 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 16 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 75
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 76 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 126
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 185
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
Y + +WS+G ++ +M+ G + F + I
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------RTAGTTF 218
Q G+ +LH+ IIHRDLK +NI + D T+KI DFGLA + +G+
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
M P V+ P Y D+++ G ++ E++ G + + ++ DQ +++G+
Sbjct: 176 WMAPEVIRMQDSNP-------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 123 IIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHS 182
I L AF + L D Y+ +L+ L + L + + + +M+ I +H
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLL--TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 183 AGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTTFMMTPYVVTRYYRAPEVIL---- 236
+HRD+KP N+++ + +++ DFG L T + V T Y +PE++
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 237 GMG-YKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
GMG Y D WS+G M EM+ G F ++ + KI+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 48 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 107
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 108 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 158
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 49 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 108
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 109 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 159
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 49 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 108
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 109 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 159
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 48 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 107
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 108 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 158
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 49 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 108
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 109 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 159
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 48 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 107
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 108 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 158
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------RTAGTTF 218
Q G+ +LH+ IIHRDLK +NI + D T+KI DFGLA + +G+
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
M P V+ P Y D+++ G ++ E++ G + + ++ DQ +++G+
Sbjct: 188 WMAPEVIRMQDSNP-------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 49 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 108
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 109 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 159
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 218
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 48 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 107
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 108 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 158
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 217
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 9/161 (5%)
Query: 123 IIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHS 182
I L AF + L D Y+ +L+ L + L + + + +M+ I +H
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLL--TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 183 AGIIHRDLKPSNIVVKSDCTLKILDFG--LARTAGTTFMMTPYVVTRYYRAPEVIL---- 236
+HRD+KP N+++ + +++ DFG L T + V T Y +PE++
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 237 GMG-YKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
GMG Y D WS+G M EM+ G F ++ + KI+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+VME
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVME 92
Query: 148 LMDAN-LCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 55 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 114
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 115 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 165
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 224
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 14/229 (6%)
Query: 59 ELPISHQMGK----KRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 113
+LPI H + K + + G A D + + VA+K + R + + KR E
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR---EII 67
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
+ + H NI+ L + EL + +C + D R + Q+
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEAR--FFFQQL 124
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTTFMMTPYVVTRYYRA 231
+ G+ + H+ + HRDLK N ++ LKI FG ++++ V T Y A
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 232 PEVILGMGYKENV-DIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
PEV+L Y V D+WS G + M+ G F + + K I ++
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 63 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 122
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 123 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 173
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 232
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFM 219
L E +Q+L ++H H+ G++HRD+K NI++ + LK++DFG T +
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-V 212
Query: 220 MTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIRGGVLFPGTDHI 269
T + TR Y PE I Y + +WS+G ++ +M+ G + F + I
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 263
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 20/120 (16%)
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA-------------RTAGTTF 218
Q G+ +LH+ IIHRDLK +NI + D T+KI DFGLA + +G+
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
M P V+ P Y D+++ G ++ E++ G + + ++ DQ +++G+
Sbjct: 188 WMAPEVIRMQDSNP-------YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 63 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 122
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 123 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 173
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 232
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-------IYIVTE 92
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 77 GAGAAYD---TATQQNVAIKKLSRP----FQNVTHAKRAYREFKLMKLVNH--KNIIGLL 127
G G+ Y + VAIK + + + + + R E L+K V+ +I LL
Sbjct: 68 GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 127
Query: 128 NAFTPQKSL-------EEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHL 180
+ F S E QD++ + A L E +Q+L ++H
Sbjct: 128 DWFERPDSFVLILERPEPVQDLFDFITERGA---------LQEELARSFFWQVLEAVRHC 178
Query: 181 HSAGIIHRDLKPSNIVVK-SDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMG 239
H+ G++HRD+K NI++ + LK++DFG T + T + TR Y PE I
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHR 237
Query: 240 Y-KENVDIWSVGCIMGEMIRGGVLF 263
Y + +WS+G ++ +M+ G + F
Sbjct: 238 YHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 14/229 (6%)
Query: 59 ELPISHQMGK----KRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 113
+LPI H + K + + G A D + + VA+K + R + + KR E
Sbjct: 11 DLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR---EII 67
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQM 173
+ + H NI+ L + EL + +C + D R + Q+
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE-RICNAGRFSEDEAR--FFFQQL 124
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCT--LKILDFGLARTAGTTFMMTPYVVTRYYRA 231
+ G+ + H+ + HRDLK N ++ LKI FG ++++ V T Y A
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIA 184
Query: 232 PEVILGMGYKENV-DIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGKM 279
PEV+L Y V D+WS G + M+ G F + + K I ++
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V+E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVIE 92
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEXTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSY 168
+E ++ + H+NI+ L +F +S+EE ++ + +D +L+ +
Sbjct: 50 KEISILNIARHRNILHLHESF---ESMEELVMIFEFISGLDIFERINTSAFELNEREIVS 106
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIV--VKSDCTLKILDFGLAR--TAGTTFMMTPYV 224
++Q+ ++ LHS I H D++P NI+ + T+KI++FG AR G F + +
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL-FT 165
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
YY APEV D+WS+G ++ ++ G
Sbjct: 166 APEYY-APEVHQHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L Q+GK + + T + VA+KKL + H + RE +++K +
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQ 70
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQMLC 175
H NI+ +++ L+ME + + Q + +DH ++ Q+
Sbjct: 71 HDNIVKYKGVCYSAGR----RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTT----FMMTPYVVTRYYRA 231
G+++L + IHR+L NI+V+++ +KI DFGL + + P ++ A
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 232 PEVILGMGYKENVDIWSVGCIMGEMI 257
PE + + D+WS G ++ E+
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V+E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVIE 92
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 14/203 (6%)
Query: 87 QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FTPQK 134
+ + AIK++ H A L KL +H NII LL A + P
Sbjct: 49 RMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 108
Query: 135 SLEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 193
+L +F V+E A + L +++ + + G+ +L IHR+L
Sbjct: 109 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAAR 168
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
NI+V + KI DFGL+R T + + A E + Y N D+WS G ++
Sbjct: 169 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 228
Query: 254 GEMIR-GGVLFPGTDHIDQWNKI 275
E++ GG + G + + K+
Sbjct: 229 WEIVSLGGTPYCGMTCAELYEKL 251
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI--------------IGLLNAFT 131
T + VA+K L +P H +E ++++ + H+NI I L+ F
Sbjct: 49 TGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 132 PQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
P SL+E YL NL Q ++ + Q+ G+ +L S +HRDL
Sbjct: 108 PSGSLKE----YLPKNKNKINLKQQLKYAV----------QICKGMDYLGSRQYVHRDLA 153
Query: 192 PSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTR----YYRAPEVILGMGYKENVDIW 247
N++V+S+ +KI DFGL + T R ++ APE ++ + D+W
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 248 SVGCIMGEMI 257
S G + E++
Sbjct: 214 SFGVTLHELL 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 32/254 (12%)
Query: 37 PYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVAIKKL 95
P D + + +W E L + +G+ D TAT + VA+K L
Sbjct: 9 PLDEHCERLPYDASKW-EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 67
Query: 96 SRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQ-----DVY 143
+ TH++ RA E K L+ + +H N++ LL A T P + EF Y
Sbjct: 68 K---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 124
Query: 144 LVMELMDANLCQVIQMDL--DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVK 198
L + + + DL D + +L+ +Q+ G++ L S IHRDL NI++
Sbjct: 125 LRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 184
Query: 199 SDCTLKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGYKENVDIWSVGCI 252
+KI DFGLAR + YV + + APE I Y D+WS G +
Sbjct: 185 EKNVVKICDFGLAR---DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 241
Query: 253 MGEMIR-GGVLFPG 265
+ E+ G +PG
Sbjct: 242 LWEIFSLGASPYPG 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 33/254 (12%)
Query: 37 PYDHSVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAGAAYD-TATQQNVAIKKL 95
P D + + +W E L + +G+ D TAT + VA+K L
Sbjct: 8 PLDEHCERLPYDASKW-EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 66
Query: 96 SRPFQNVTHAK-RAY-REFK-LMKLVNHKNIIGLLNAFT----PQKSLEEFQDVYLVMEL 148
+ TH++ RA E K L+ + +H N++ LL A T P + EF +
Sbjct: 67 K---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 123
Query: 149 MDANLCQVIQMD---------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 199
+ + + + L E + +Q+ G++ L S IHRDL NI++
Sbjct: 124 LRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Query: 200 DCTLKILDFGLARTAGTTFMMTPYVVTR-------YYRAPEVILGMGYKENVDIWSVGCI 252
+KI DFGLAR P V + + APE I Y D+WS G +
Sbjct: 184 KNVVKICDFGLAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 253 MGEMIR-GGVLFPG 265
+ E+ G +PG
Sbjct: 240 LWEIFSLGASPYPG 253
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 35 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 83
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 84 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 143
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 144 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 196
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 197 TELTTKGRVPYPG 209
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 28/175 (16%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSY- 168
REF+++K +NHKNI+ L ++EE + +M+ C + L+ +Y
Sbjct: 56 REFEVLKKLNHKNIVKLF-------AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 169 --------LLYQMLCGIKHLHSAGIIHRDLKPSNI--VVKSD--CTLKILDFGLARTAGT 216
+L ++ G+ HL GI+HR++KP NI V+ D K+ DFG AR
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
Query: 217 TFMMTPYVVTRYYRAPEV----IL----GMGYKENVDIWSVGCIMGEMIRGGVLF 263
T Y P++ +L Y VD+WS+G G + F
Sbjct: 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 33 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 81
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 82 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 141
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 142 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 194
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 195 TELTTKGRVPYPG 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 86 TQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNI--------------IGLLNAFT 131
T + VA+K L +P H +E ++++ + H+NI I L+ F
Sbjct: 37 TGEQVAVKSL-KPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 132 PQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
P SL+E YL NL Q ++ + Q+ G+ +L S +HRDL
Sbjct: 96 PSGSLKE----YLPKNKNKINLKQQLKYAV----------QICKGMDYLGSRQYVHRDLA 141
Query: 192 PSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTR----YYRAPEVILGMGYKENVDIW 247
N++V+S+ +KI DFGL + T R ++ APE ++ + D+W
Sbjct: 142 ARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 201
Query: 248 SVGCIMGEMI 257
S G + E++
Sbjct: 202 SFGVTLHELL 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 42/218 (19%)
Query: 76 LGAG-------AAYDTATQQNVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLL 127
LGAG Y+ +T+ VA+K L + T + +A+ E LMK + H ++ L
Sbjct: 20 LGAGQFGEVWMGYYNNSTK--VAVKTL----KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 128 NAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMDLDHE----RMSYLLYQMLCGIKHLHS 182
T + + +Y++ E M +L ++ D + ++ Q+ G+ ++
Sbjct: 74 AVVTKE------EPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLART---------AGTTFMMTPYVVTRYYRAPE 233
IHRDL+ +N++V KI DFGLAR G F + + APE
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPE 180
Query: 234 VILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGTDHID 270
I + ++WS G ++ E++ G + +PG + D
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 41/212 (19%)
Query: 76 LGAG-------AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
LGAG A Y+ T+ VA+K + +P A A E +MK + H ++ L
Sbjct: 196 LGAGQFGEVWMATYNKHTK--VAVKTM-KPGSMSVEAFLA--EANVMKTLQHDKLVKLHA 250
Query: 129 AFTPQKSLEEFQDVYLVMELM-DANLCQVIQMDLDHE----RMSYLLYQMLCGIKHLHSA 183
T + +Y++ E M +L ++ D + ++ Q+ G+ +
Sbjct: 251 VVTKEP-------IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLART---------AGTTFMMTPYVVTRYYRAPEV 234
IHRDL+ +NI+V + KI DFGLAR G F + + APE
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPEA 356
Query: 235 ILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
I + D+WS G ++ E++ G + +PG
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 92
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 41/215 (19%)
Query: 76 LGAG-------AAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
LGAG A Y+ T+ VA+K + +P A A E +MK + H ++ L
Sbjct: 23 LGAGQFGEVWMATYNKHTK--VAVKTM-KPGSMSVEAFLA--EANVMKTLQHDKLVKLHA 77
Query: 129 AFTPQKSLEEFQDVYLVMELM-DANLCQVIQMDLDHE----RMSYLLYQMLCGIKHLHSA 183
T + +Y++ E M +L ++ D + ++ Q+ G+ +
Sbjct: 78 VVTKE-------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLART---------AGTTFMMTPYVVTRYYRAPEV 234
IHRDL+ +NI+V + KI DFGLAR G F + + APE
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK-------WTAPEA 183
Query: 235 ILGMGYKENVDIWSVGCIMGEMIR-GGVLFPGTDH 268
I + D+WS G ++ E++ G + +PG +
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%), Gaps = 22/235 (9%)
Query: 46 EHTVDQWKELIYQELPISHQMGKKRHNTSHLG--AGAAYDTATQQNVAIKKLSRPFQNVT 103
+H + KE+ + ++G+ R + G G A TQ VAIK L +
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQA-VAIKTLKDKAEGPL 72
Query: 104 HAKRAYR-EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV--------YLVMELMDANLC 154
+ +R E L + H N++ LL T + L +LVM +++
Sbjct: 73 --REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 155 -----QVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 209
+ ++ L+ +L+ Q+ G+++L S ++H+DL N++V +KI D G
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 210 LAR---TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
L R A ++ ++ + APE I+ + + DIWS G ++ E+ G+
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 34/192 (17%)
Query: 90 VAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 294 VAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEY 342
Query: 149 MD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
M +L ++ + L ++ + Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 402
Query: 204 KILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 403 KVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLT 455
Query: 255 EM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 456 ELTTKGRVPYPG 467
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVV---TR 227
+Q+ G++ L S IHRDL NI++ + +KI DFGLAR + YV TR
Sbjct: 206 FQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR---DIYKNPDYVRKGDTR 262
Query: 228 Y---YRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ APE I Y D+WS G ++ E+ GG +PG
Sbjct: 263 LPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 22/189 (11%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VAIK L + E ++MK + H ++ L + + +Y+V E M
Sbjct: 36 VAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEP-------IYIVTEYM 85
Query: 150 DANLCQVIQMDLDHERMSY-----LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
+ D + + + Q+ G+ ++ IHRDL+ +NI+V + K
Sbjct: 86 NKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICK 145
Query: 205 ILDFGLAR----TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-RG 259
I DFGLAR T + + + APE L + D+WS G ++ E++ +G
Sbjct: 146 IADFGLARLIEDNEXTARQGAKFPIK--WTAPEAALYGRFTIKSDVWSFGILLTELVTKG 203
Query: 260 GVLFPGTDH 268
V +PG ++
Sbjct: 204 RVPYPGMNN 212
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 56/255 (21%)
Query: 76 LGAGAAYDTATQ-----QNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLNA 129
LG G++ Q + VA+K++ F ++ A E KL+ + +H N+I +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRYYCS 77
Query: 130 FTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSY--------LLYQMLCGIKHL 180
T + L Y+ +EL + NL +++ ++ E + LL Q+ G+ HL
Sbjct: 78 ETTDRFL------YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 181 HSAGIIHRDLKPSNIVVKSDC-----------TLKIL--DFGLARTAGT-----TFMMTP 222
HS IIHRDLKP NI+V + L+IL DFGL + + +
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 223 YVVTRYYRAPEVI-------LGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKI 275
T +RAPE++ ++DI+S+GC+ ++ G G + + N I
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 251
Query: 276 IG-----KMREAHDK 285
G +M+ HD+
Sbjct: 252 RGIFSLDEMKCLHDR 266
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 41 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 89
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M+ +L ++ + + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 90 YMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLV 149
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 150 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 202
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 203 TELTTKGRVPYPG 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVCE 92
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 41 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 89
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M+ +L ++ + + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 90 YMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLV 149
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 150 CKVADFGLARLIEDNEWTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 202
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 203 TELTTKGRVPYPG 215
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 23/184 (12%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNII---GLLNAFTPQKSLEEFQDV 142
VAIK L + +R REF +M H NII G++ P L EF +
Sbjct: 45 VAIKTLKG-----GYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMEN 99
Query: 143 YLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
+ + N Q + L +L + G+++L +HRDL NI+V S+
Sbjct: 100 GALDSFLRLNDGQFTVIQLVG-----MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLV 154
Query: 203 LKILDFGLARTAGTTFMMTPYV------VTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
K+ DFGL+R Y + + APE I + D WS G +M E+
Sbjct: 155 CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 214
Query: 257 IRGG 260
+ G
Sbjct: 215 MSFG 218
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 36/221 (16%)
Query: 54 ELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFK 113
EL +E+ + ++G + LG Q +VA+K + + ++E +
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKG-----QYDVAVKMIK---EGSMSEDEFFQEAQ 55
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM-----DLDHERMSY 168
M ++H ++ + + +Y+V E + +N C + + L+ ++
Sbjct: 56 TMMKLSHPKLVKFYGVCSKE------YPIYIVTEYI-SNGCLLNYLRSHGKGLEPSQLLE 108
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFM 219
+ Y + G+ L S IHRDL N +V D +K+ DFG+ R + GT F
Sbjct: 109 MCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168
Query: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ + APEV Y D+W+ G +M E+ G
Sbjct: 169 VK-------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLG 202
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 34/192 (17%)
Query: 90 VAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 211 VAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEY 259
Query: 149 MD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
M +L ++ + + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 319
Query: 204 KILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLT 372
Query: 255 EM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 373 ELTTKGRVPYPG 384
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 34/192 (17%)
Query: 90 VAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 211 VAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEY 259
Query: 149 MD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
M +L ++ + L ++ + Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 319
Query: 204 KILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLT 372
Query: 255 EM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 373 ELTTKGRVPYPG 384
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 28/175 (16%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSY- 168
REF+++K +NHKNI+ L ++EE + +M+ C + L+ +Y
Sbjct: 56 REFEVLKKLNHKNIVKLF-------AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 169 --------LLYQMLCGIKHLHSAGIIHRDLKPSNI--VVKSD--CTLKILDFGLARTAGT 216
+L ++ G+ HL GI+HR++KP NI V+ D K+ DFG AR
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168
Query: 217 TFMMTPYVVTRYYRAPEV----IL----GMGYKENVDIWSVGCIMGEMIRGGVLF 263
T Y P++ +L Y VD+WS+G G + F
Sbjct: 169 DEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 57 YQELPISHQMGKKRHNTSHLGAGAAYDT-ATQQNVAIKKLSRPFQNVTHA-KRAY-REFK 113
+ E PIS +G + G G Y VA+KKL+ T K+ + +E K
Sbjct: 18 FDERPIS--VGGNKXGEG--GFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIK 73
Query: 114 LMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM------ELMDANLCQVIQMDLDHERMS 167
+ H+N++ LL F+ + D+ LV L+D C L
Sbjct: 74 VXAKCQHENLVELL-GFS-----SDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRC 127
Query: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYV 224
+ GI LH IHRD+K +NI++ T KI DFGLAR + + V
Sbjct: 128 KIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIV 187
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTD 267
T Y APE + G DI+S G ++ E+I G P D
Sbjct: 188 GTTAYXAPEALRGE-ITPKSDIYSFGVVLLEIITG---LPAVD 226
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 37 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-------PIYIVTE 85
Query: 148 LMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ + L ++ + Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 86 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 145
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 146 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 198
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 199 TELTTKGRVPYPG 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 25/185 (13%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREF----KLMKLVNHKNII---GLLNAFTPQKSLEEFQDV 142
VAIK L + +R REF +M H NII G++ P L EF +
Sbjct: 47 VAIKTLKG-----GYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMEN 101
Query: 143 YLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
+ + N Q + L +L + G+++L +HRDL NI+V S+
Sbjct: 102 GALDSFLRLNDGQFTVIQLVG-----MLRGIASGMRYLAEMSYVHRDLAARNILVNSNLV 156
Query: 203 LKILDFGLAR-------TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
K+ DFGL+R T + + R+ APE I + D WS G +M E
Sbjct: 157 CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT-APEAIAFRKFTSASDAWSYGIVMWE 215
Query: 256 MIRGG 260
++ G
Sbjct: 216 VMSFG 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 106/256 (41%), Gaps = 39/256 (15%)
Query: 42 VDEREHTVDQWKELIYQELPISHQMGK----KRHNTSHLGAGAAYDTATQQNVAIKKLSR 97
VD RE+ D E + L +G K N + G T VA+K L
Sbjct: 29 VDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISK---TGVSIQVAVKMLKE 85
Query: 98 PFQNVTHAKRAYREFKLM-KLVNHKNIIGLLNAFT---PQKSLEEFQDVYLVMELMDANL 153
+ + + E K+M +L +H+NI+ LL A T P + E+ ++ + +
Sbjct: 86 K-ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR 144
Query: 154 CQVIQMDLDHERMSYL-----------------LYQMLCGIKHLHSAGIIHRDLKPSNIV 196
+ + ++++E L YQ+ G++ L +HRDL N++
Sbjct: 145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVL 204
Query: 197 VKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVG 250
V +KI DFGLAR + + YVV R APE + Y D+WS G
Sbjct: 205 VTHGKVVKICDFGLARDIMSD---SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG 261
Query: 251 CIMGEMIRGGV-LFPG 265
++ E+ GV +PG
Sbjct: 262 ILLWEIFSLGVNPYPG 277
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VAIK L + + + E +M +H NII L T K V ++ E M
Sbjct: 60 VAIKTLKAGYTD-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP------VMIITEYM 112
Query: 150 DANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
+ D L ML GI K+L +HRDL NI+V S+ K+
Sbjct: 113 ENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKV 172
Query: 206 LDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
DFG++R + + + APE I + D+WS G +M E++ G
Sbjct: 173 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 231
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 40/234 (17%)
Query: 56 IYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM 115
I +++ + Q+GK R+ +G + VA+K T +RE ++
Sbjct: 35 IAKQIQMVKQIGKGRYGEVWMGKWRG------EKVAVKVFF-----TTEEASWFRETEIY 83
Query: 116 K--LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL-MDANLCQVIQ-MDLDHERMSYLLY 171
+ L+ H+NI+G + A K + +YL+ + + +L ++ LD + M L Y
Sbjct: 84 QTVLMRHENILGFIAADI--KGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAY 141
Query: 172 QMLCGIKHLHS--------AGIIHRDLKPSNIVVKSDCTLKILDFGLA-----RTAGTTF 218
+ G+ HLH+ I HRDLK NI+VK + T I D GLA T
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 219 MMTPYVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGVL 262
V T+ Y PEV+ L + ++ D++S G I+ E+ R GG++
Sbjct: 202 PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 92
Query: 148 LMD-ANLCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M +L ++ ++ + R+ L+ Q+ G+ ++ +HRDL +NI+V +
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 34/193 (17%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME 147
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 44 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTE 92
Query: 148 LMDAN-LCQVIQMDL-DHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
M L ++ ++ + R+ L+ Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 93 YMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 152
Query: 203 LKILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 253
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 153 CKVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILL 205
Query: 254 GEM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 206 TELTTKGRVPYPG 218
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 34/192 (17%)
Query: 90 VAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
VAIK L + T + A+ +E ++MK + H+ ++ L + + +Y+V E
Sbjct: 211 VAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVGEY 259
Query: 149 MD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 203
M +L ++ + L ++ + Q+ G+ ++ +HRDL+ +NI+V +
Sbjct: 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 319
Query: 204 KILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
K+ DFGLAR TA G F + + APE L + D+WS G ++
Sbjct: 320 KVADFGLARLIEDNEYTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLT 372
Query: 255 EM-IRGGVLFPG 265
E+ +G V +PG
Sbjct: 373 ELTTKGRVPYPG 384
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 53 KELIYQELPISHQMGKKRHNTSHLG--AGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYR 110
KE+ + ++G+ R + G G A TQ VAIK L + + +R
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQA-VAIKTLKDKAEGPL--REEFR 60
Query: 111 -EFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDV--------YLVMELMDANLC-----QV 156
E L + H N++ LL T + L +LVM +++ +
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 157 IQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---T 213
++ L+ +L+ Q+ G+++L S ++H+DL N++V +KI D GL R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 214 AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGV 261
A ++ ++ + APE I+ + + DIWS G ++ E+ G+
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNII---GLLNAFTPQKSLEEFQDVYLVM 146
VAIK L + + E +M +H N+I G++ TP + EF + +
Sbjct: 38 VAIKTLKSGYTE-KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 147 ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+ N Q + L +L + G+K+L +HR L NI+V S+ K+
Sbjct: 97 SFLRQNDGQFTVIQL-----VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVS 151
Query: 207 DFGLAR-----TAGTTFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 259
DFGL+R T+ T+ + + R + APE I + D+WS G +M E++
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIR-WTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 210
Query: 260 G 260
G
Sbjct: 211 G 211
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 71 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYVVTRYYRAPEV 234
+HRDL N +V +K+ DFGL+R + G+ F + + PEV
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 176
Query: 235 ILGMGYKENVDIWSVGCIMGEMIRGG 260
++ + DIW+ G +M E+ G
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLG 202
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 87 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTTFMMTPYVVTRYYRAPEVILGMG 239
+HRDL N +V +K+ DFGL+R T+ + + + V + PEV++
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR--WSPPEVLMYSK 197
Query: 240 YKENVDIWSVGCIMGEMIRGG 260
+ DIW+ G +M E+ G
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLG 218
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 159 MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTF 218
+L + + + + CG+++L S IHRDL N ++ D T+ + DFGL+R +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 219 MMTPYVVTRY---YRAPEVILGMGYKENVDIWSVGCIMGE-MIRGGVLFPGTDHIDQWNK 274
++ + A E + Y + D+W+ G M E M RG + G ++ + +N
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY 251
Query: 275 IIGKMR 280
+IG R
Sbjct: 252 LIGGNR 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGAAYDTAT-------QQNVAIKKLSRPFQNVTHA--K 106
+LP + + R+N LGAGA +++ +K + ++ HA K
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 107 RAY-REFKLMK-LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
A E K+M L H+NI+ LL A T + + +L++ L + + DLD E
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF-LRRKAEADLDKE 152
Query: 165 -----RMSYLLY---QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216
+ LL+ Q+ G+ L S IHRD+ N+++ + KI DFGLAR
Sbjct: 153 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 212
Query: 217 TFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIRGGV-LFPG 265
+ Y+V R APE I Y D+WS G ++ E+ G+ +PG
Sbjct: 213 D---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VAIK L + + + E +M +H NII L T K V ++ E M
Sbjct: 45 VAIKTLKAGYTD-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP------VMIITEYM 97
Query: 150 DANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
+ D L ML GI K+L +HRDL NI+V S+ K+
Sbjct: 98 ENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 157
Query: 206 LDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
DFG++R + + + APE I + D+WS G +M E++ G
Sbjct: 158 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 53 KELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 112
+ + +++ + +GK R+ G+ +NVA+K S K +RE
Sbjct: 32 QRTVARQITLLECVGKGRYGEVWRGSWQG------ENVAVKIFSS-----RDEKSWFRET 80
Query: 113 KLMKLV--NHKNIIGLLNA-FTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSY 168
+L V H+NI+G + + T + S + + E+ +L +Q+ LD
Sbjct: 81 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM--GSLYDYLQLTTLDTVSCLR 138
Query: 169 LLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----RTAG 215
++ + G+ HLH I HRDLK NI+VK + I D GLA T
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
Query: 216 TTFMMTPYVVTRYYRAPEVILGM-------GYKENVDIWSVGCIMGEMIR 258
P V T+ Y APEV+ YK VDIW+ G ++ E+ R
Sbjct: 199 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVAR 247
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 72 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYVVTRYYRAPEV 234
+HRDL N +V +K+ DFGL+R + G+ F + + PEV
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 177
Query: 235 ILGMGYKENVDIWSVGCIMGEMIRGG 260
++ + DIW+ G +M E+ G
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLG 203
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 20/142 (14%)
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
L+ AF + SL +F +V LC + + R L++ + G+K H I
Sbjct: 99 LITAFHEKGSLSDFLKANVVSW---NELCHIAET---MARGLAYLHEDIPGLKDGHKPAI 152
Query: 186 IHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTTFMMTPYVVTRYYRAPEVILG-M 238
HRD+K N+++K++ T I DFGLA ++AG T V TR Y APEV+ G +
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH---GQVGTRRYMAPEVLEGAI 209
Query: 239 GYKEN----VDIWSVGCIMGEM 256
++ + +D++++G ++ E+
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 78 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYVVTRYYRAPEV 234
+HRDL N +V +K+ DFGL+R + G+ F + + PEV
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 183
Query: 235 ILGMGYKENVDIWSVGCIMGEMIRGG 260
++ + DIW+ G +M E+ G
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLG 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 67 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYVVTRYYRAPEV 234
+HRDL N +V +K+ DFGL+R + G+ F + + PEV
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 172
Query: 235 ILGMGYKENVDIWSVGCIMGEMIRGG 260
++ + DIW+ G +M E+ G
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLG 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 87 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYVVTRYYRAPEV 234
+HRDL N +V +K+ DFGL+R + G+ F + + PEV
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-------WSPPEV 192
Query: 235 ILGMGYKENVDIWSVGCIMGEMIRGG 260
++ + DIW+ G +M E+ G
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLG 218
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGAAYDTAT-------QQNVAIKKLSRPFQNVTHA--K 106
+LP + + R+N LGAGA +++ +K + ++ HA K
Sbjct: 26 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 85
Query: 107 RAY-REFKLMK-LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
A E K+M L H+NI+ LL A T + + +L++ L + + DLD E
Sbjct: 86 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNF-LRRKAEADLDKE 144
Query: 165 -----RMSYLLY---QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216
+ LL+ Q+ G+ L S IHRD+ N+++ + KI DFGLAR
Sbjct: 145 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 204
Query: 217 TFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIRGGV-LFPG 265
+ Y+V R APE I Y D+WS G ++ E+ G+ +PG
Sbjct: 205 D---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VAIK L + + + E +M +H NII L T K V ++ E M
Sbjct: 39 VAIKTLKAGYTD-KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP------VMIITEYM 91
Query: 150 DANLCQVIQMDLDHERMSYLLYQMLCGI----KHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
+ D L ML GI K+L +HRDL NI+V S+ K+
Sbjct: 92 ENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 151
Query: 206 LDFGLART----AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
DFG++R + + + APE I + D+WS G +M E++ G
Sbjct: 152 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 32/191 (16%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VA+K L Q E LMK + H+ ++ L T + +Y++ E M
Sbjct: 36 VAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP-------IYIITEYM 85
Query: 150 D-ANLCQVIQ----MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
+ +L ++ + L ++ + Q+ G+ + IHR+L+ +NI+V + K
Sbjct: 86 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCK 145
Query: 205 ILDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
I DFGLAR TA G F + + APE I + D+WS G ++ E
Sbjct: 146 IADFGLARLIEDNEYTAREGAKFPIK-------WTAPEAINYGTFTIKSDVWSFGILLTE 198
Query: 256 MIR-GGVLFPG 265
++ G + +PG
Sbjct: 199 IVTHGRIPYPG 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 29/171 (16%)
Query: 110 REFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDL-DHERMS 167
+E ++MK + H+ ++ L + + +Y+V E M +L ++ ++ + R+
Sbjct: 229 QEAQVMKKLRHEKLVQLYAVVSEEP-------IYIVTEYMSKGSLLDFLKGEMGKYLRLP 281
Query: 168 YLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-------TA--G 215
L+ Q+ G+ ++ +HRDL+ +NI+V + K+ DFGL R TA G
Sbjct: 282 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQG 341
Query: 216 TTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM-IRGGVLFPG 265
F + + APE L + D+WS G ++ E+ +G V +PG
Sbjct: 342 AKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 53 KELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREF 112
+ + +++ + +GK R+ G+ +NVA+K S K +RE
Sbjct: 3 QRTVARDITLLECVGKGRYGEVWRGSWQG------ENVAVKIFSS-----RDEKSWFRET 51
Query: 113 KLMKLV--NHKNIIGLLNA-FTPQKSLEEFQDVYLVMELMDANLCQVIQMD-LDHERMSY 168
+L V H+NI+G + + T + S + + E+ +L +Q+ LD
Sbjct: 52 ELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM--GSLYDYLQLTTLDTVSCLR 109
Query: 169 LLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA-----RTAG 215
++ + G+ HLH I HRDLK NI+VK + I D GLA T
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
Query: 216 TTFMMTPYVVTRYYRAPEVILGM-------GYKENVDIWSVGCIMGEMIR 258
P V T+ Y APEV+ YK VDIW+ G ++ E+ R
Sbjct: 170 LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR-VDIWAFGLVLWEVAR 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 69 KRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLN 128
K T G Q +VAIK + + E K+M ++H+ ++ L
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 129 AFTPQKSLEEFQDVYLVMELMDANLCQVIQM-DLDHERMSYLLYQM---LC-GIKHLHSA 183
T Q+ ++++ E M AN C + + ++ H + L +M +C +++L S
Sbjct: 72 VCTKQRP------IFIITEYM-ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYVVTRYYRAPEV 234
+HRDL N +V +K+ DFGL+R + G+ F + + PEV
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-------WSPPEV 177
Query: 235 ILGMGYKENVDIWSVGCIMGEMIRGG 260
++ + DIW+ G +M E+ G
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLG 203
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA----RTAGTTFMMTPYVVTR 227
Q G+ +LH+ IIHRD+K +NI + T+KI DFGLA R +G+ + P +
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQP-TGSV 198
Query: 228 YYRAPEVIL---GMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGK 278
+ APEVI + D++S G ++ E++ G + + ++ DQ ++G+
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 106/264 (40%), Gaps = 43/264 (16%)
Query: 36 GPYDHSVDEREHTVDQWKELIYQELPISHQMGKK------RHNTSHLGAGAAYDTATQQN 89
GP SVD + D E + L + +G+ + HL A Y T
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT----- 55
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FTPQKSLE 137
VA+K L + + + + EF ++K VNH ++I L A + SL
Sbjct: 56 VAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 138 EF-QDVYLVMELMDANLCQVIQMDLDH--ER------MSYLLYQMLCGIKHLHSAGIIHR 188
F ++ V + LDH ER + +Q+ G+++L ++HR
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR 174
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP------EVILGMGYKE 242
DL NI+V +KI DFGL+R + YV R P E + Y
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSR---DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 243 NVDIWSVGCIMGEMIR-GGVLFPG 265
D+WS G ++ E++ GG +PG
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 28/190 (14%)
Query: 89 NVAIKKLSRPFQNVTHAKRAY-REFKLMKLVNHKNIIGLLNAFT--PQKSLEEFQDVYLV 145
VAIK L + T + A+ +E ++MK + H+ ++ L + P + E+ +
Sbjct: 34 RVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSL 89
Query: 146 MELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
++ + + +++ ++ + Q+ G+ ++ +HRDL+ +NI+V + K+
Sbjct: 90 LDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKV 145
Query: 206 LDFGLAR-------TA--GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
DFGLAR TA G F + + APE L + D+WS G ++ E+
Sbjct: 146 ADFGLARLIEDNEXTARQGAKFPIK-------WTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 257 -IRGGVLFPG 265
+G V +PG
Sbjct: 199 TTKGRVPYPG 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
EL ++G + HLG D VAIK + + + E ++M
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIR---EGAMSEEDFIEEAEVMMK 58
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQM 173
++H ++ L Q + LV E M+ ++ + + E + + +
Sbjct: 59 LSHPKLVQLYGVCLEQAP------ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYV 224
G+ +L A +IHRDL N +V + +K+ DFG+ R + GT F +
Sbjct: 113 CEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--- 169
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ +PEV Y D+WS G +M E+ G
Sbjct: 170 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 88 QNVAIKKLSRPFQNVTHAKRAYREFKLMKLV--NHKNIIGLLNA-FTPQKSLEEFQDVYL 144
+NVA+K S K +RE +L V H+NI+G + + T + S + +
Sbjct: 32 ENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH 86
Query: 145 VMELMDANLCQVIQMD-LDHERMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNI 195
E+ +L +Q+ LD ++ + G+ HLH I HRDLK NI
Sbjct: 87 YHEM--GSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNI 144
Query: 196 VVKSDCTLKILDFGLA-----RTAGTTFMMTPYVVTRYYRAPEVILGM-------GYKEN 243
+VK + I D GLA T P V T+ Y APEV+ YK
Sbjct: 145 LVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKR- 203
Query: 244 VDIWSVGCIMGEMIR 258
VDIW+ G ++ E+ R
Sbjct: 204 VDIWAFGLVLWEVAR 218
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
+EL + +GK LG VA+K + +N A+ E +M
Sbjct: 12 KELKLLQTIGKGEFGDVMLG------DYRGNKVAVKCI----KNDATAQAFLAEASVMTQ 61
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQ 172
+ H N++ LL +EE +Y+V E M +L ++ L + +
Sbjct: 62 LRHSNLVQLLGVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 116
Query: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+ +++L +HRDL N++V D K+ DFGL + A +T V + AP
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--WTAP 174
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIR-GGVLFP 264
E + + D+WS G ++ E+ G V +P
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPYP 207
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
EL ++G + HLG D VAIK + + + E ++M
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIR---EGAMSEEDFIEEAEVMMK 61
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQM 173
++H ++ L Q + LV E M+ ++ + + E + + +
Sbjct: 62 LSHPKLVQLYGVCLEQAP------ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 115
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYV 224
G+ +L A +IHRDL N +V + +K+ DFG+ R + GT F +
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--- 172
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ +PEV Y D+WS G +M E+ G
Sbjct: 173 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
EL ++G + HLG D VAIK + + + E ++M
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIR---EGAMSEEDFIEEAEVMMK 56
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQM 173
++H ++ L Q + LV E M+ ++ + + E + + +
Sbjct: 57 LSHPKLVQLYGVCLEQAP------ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 110
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYV 224
G+ +L A +IHRDL N +V + +K+ DFG+ R + GT F +
Sbjct: 111 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--- 167
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ +PEV Y D+WS G +M E+ G
Sbjct: 168 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 199
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 47/228 (20%)
Query: 69 KRHNT---SHLGAGA--------AYDTATQQN---VAIKKLSRPFQNVTHAKRAYREFKL 114
KRHN LG GA Y+ +Q+ VA+K L N K +RE +L
Sbjct: 11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR--KDFHREAEL 68
Query: 115 MKLVNHKNII---GLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQM-------DLDHE 164
+ + H++I+ G+ P + E+ + + + A+ + M +L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 165 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV 224
+M ++ Q+ G+ +L S +HRDL N +V + +KI DFG++R +
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS-------- 180
Query: 225 VTRYYRA------------PEVILGMGYKENVDIWSVGCIMGEMIRGG 260
T YYR PE I+ + D+WS+G ++ E+ G
Sbjct: 181 -TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG 227
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
EL ++G + HLG D VAIK + + + E ++M
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIR---EGAMSEEDFIEEAEVMMK 58
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQM 173
++H ++ L Q + LV E M+ ++ + + E + + +
Sbjct: 59 LSHPKLVQLYGVCLEQAP------ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 112
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYV 224
G+ +L A +IHRDL N +V + +K+ DFG+ R + GT F +
Sbjct: 113 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--- 169
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ +PEV Y D+WS G +M E+ G
Sbjct: 170 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
EL ++G + HLG D VAIK + + + E ++M
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIR---EGAMSEEDFIEEAEVMMK 59
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQM 173
++H ++ L Q + LV E M+ ++ + + E + + +
Sbjct: 60 LSHPKLVQLYGVCLEQAP------ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 113
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYV 224
G+ +L A +IHRDL N +V + +K+ DFG+ R + GT F +
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--- 170
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ +PEV Y D+WS G +M E+ G
Sbjct: 171 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 37/261 (14%)
Query: 36 GPYDHSVDEREHTVDQWKELIYQELPISHQMGKK------RHNTSHLGAGAAYDTATQQN 89
GP SVD + D E + L + +G+ + HL A Y T
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT----- 55
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FTPQKSLE 137
VA+K L + + + + EF ++K VNH ++I L A + SL
Sbjct: 56 VAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 138 EF-QDVYLVMELMDANLCQVIQMDLDH--ER------MSYLLYQMLCGIKHLHSAGIIHR 188
F ++ V + LDH ER + +Q+ G+++L ++HR
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHR 174
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYVVTRYYRAPEVILGMGYKENVD 245
DL NI+V +KI DFGL+R + + + + A E + Y D
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 246 IWSVGCIMGEMIR-GGVLFPG 265
+WS G ++ E++ GG +PG
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPG 255
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
+EL + +GK LG VA+K + +N A+ E +M
Sbjct: 193 KELKLLQTIGKGEFGDVMLG------DYRGNKVAVKCI----KNDATAQAFLAEASVMTQ 242
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQ 172
+ H N++ LL +EE +Y+V E M +L ++ L + +
Sbjct: 243 LRHSNLVQLLGVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 297
Query: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+ +++L +HRDL N++V D K+ DFGL + A +T V + AP
Sbjct: 298 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--WTAP 355
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIR-GGVLFP 264
E + + D+WS G ++ E+ G V +P
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 388
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 33/229 (14%)
Query: 53 KELIYQELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSR-------PFQN-VTH 104
+E E + +GK T A + + VAIK + R P + VT
Sbjct: 26 REAFEAEYRLGPLLGKGGFGTVF----AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTC 81
Query: 105 AKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVME--LMDANLCQVI--QMD 160
+K+ H +I LL+ F Q+ LV+E L +L I +
Sbjct: 82 PLEVALLWKVGAGGGHPGVIRLLDWFETQEGF------MLVLERPLPAQDLFDYITEKGP 135
Query: 161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--KSDCTLKILDFGLARTAGTTF 218
L Q++ I+H HS G++HRD+K NI++ + C K++DFG +G
Sbjct: 136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA-KLIDFG----SGALL 190
Query: 219 MMTPYV---VTRYYRAPEVILGMGYKE-NVDIWSVGCIMGEMIRGGVLF 263
PY TR Y PE I Y +WS+G ++ +M+ G + F
Sbjct: 191 HDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
+EL + +GK LG VA+K + +N A+ E +M
Sbjct: 21 KELKLLQTIGKGEFGDVMLG------DYRGNKVAVKCI----KNDATAQAFLAEASVMTQ 70
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQ 172
+ H N++ LL +EE +Y+V E M +L ++ L + +
Sbjct: 71 LRHSNLVQLLGVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 125
Query: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+ +++L +HRDL N++V D K+ DFGL + A +T V + AP
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--WTAP 183
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIR-GGVLFP 264
E + + D+WS G ++ E+ G V +P
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 37/261 (14%)
Query: 36 GPYDHSVDEREHTVDQWKELIYQELPISHQMGKK------RHNTSHLGAGAAYDTATQQN 89
GP SVD + D E + L + +G+ + HL A Y T
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTT----- 55
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FTPQKSLE 137
VA+K L + + + + EF ++K VNH ++I L A + SL
Sbjct: 56 VAVKML-KENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 138 EF-QDVYLVMELMDANLCQVIQMDLDH--ER------MSYLLYQMLCGIKHLHSAGIIHR 188
F ++ V + LDH ER + +Q+ G+++L ++HR
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR 174
Query: 189 DLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYVVTRYYRAPEVILGMGYKENVD 245
DL NI+V +KI DFGL+R + + + + A E + Y D
Sbjct: 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 246 IWSVGCIMGEMIR-GGVLFPG 265
+WS G ++ E++ GG +PG
Sbjct: 235 VWSFGVLLWEIVTLGGNPYPG 255
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 23/213 (10%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
+EL + +GK LG VA+K + +N A+ E +M
Sbjct: 6 KELKLLQTIGKGEFGDVMLG------DYRGNKVAVKCI----KNDATAQAFLAEASVMTQ 55
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM-DANLCQVIQMD----LDHERMSYLLYQ 172
+ H N++ LL +EE +Y+V E M +L ++ L + +
Sbjct: 56 LRHSNLVQLLGVI-----VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAP 232
+ +++L +HRDL N++V D K+ DFGL + A +T V + AP
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK--WTAP 168
Query: 233 EVILGMGYKENVDIWSVGCIMGEMIR-GGVLFP 264
E + + D+WS G ++ E+ G V +P
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYP 201
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 141 DVYLVMELMDANLCQVIQMDLDHER------MSYLLYQMLCGIKHLHSA-GIIHRDLKPS 193
DV++ EL D +L + + +D + + + ++ ++HLHS +IHRD+KPS
Sbjct: 107 DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 166
Query: 194 NIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRAPEVILG----MGYKENVDIWSV 249
N+++ + +K DFG++ + Y APE I GY DIWS+
Sbjct: 167 NVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSL 226
Query: 250 GCIMGEM 256
G E+
Sbjct: 227 GITXIEL 233
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 109 YREFKLMK--LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQ-MDLDHE 164
+RE ++ L+ H NI+G + + S ++L+ + +L +Q L+
Sbjct: 48 FRETEIYNTVLLRHDNILGFIA--SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPH 105
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA--RTA 214
L CG+ HLH I HRD K N++VKS+ I D GLA +
Sbjct: 106 LALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 215 GTTFM---MTPYVVTRYYRAPEVI-------LGMGYKENVDIWSVGCIMGEMIRGGVL 262
G+ ++ P V T+ Y APEV+ YK DIW+ G ++ E+ R ++
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWT-DIWAFGLVLWEIARRTIV 222
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 34/216 (15%)
Query: 58 QELPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKL 117
EL ++G + HLG D VAIK + + E ++M
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKD-----KVAIKTIK---EGSMSEDDFIEEAEVMMK 78
Query: 118 VNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD----ANLCQVIQMDLDHERMSYLLYQM 173
++H ++ L Q + LV E M+ ++ + + E + + +
Sbjct: 79 LSHPKLVQLYGVCLEQAP------ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDV 132
Query: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTTFMMTPYV 224
G+ +L A +IHRDL N +V + +K+ DFG+ R + GT F +
Sbjct: 133 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK--- 189
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
+ +PEV Y D+WS G +M E+ G
Sbjct: 190 ----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------ 224
+Q+ G++ L S IHRDL NI++ +KI DFGLAR + YV
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 261
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ + APE I Y D+WS G ++ E+ G +PG
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------ 224
+Q+ G++ L S IHRDL NI++ +KI DFGLAR + YV
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 263
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ + APE I Y D+WS G ++ E+ G +PG
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 83 LLGICLTST-------VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFG 217
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------ 224
+Q+ G++ L S IHRDL NI++ +KI DFGLAR + YV
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 254
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ + APE I Y D+WS G ++ E+ G +PG
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYV------ 224
+Q+ G++ L S IHRDL NI++ +KI DFGLAR + YV
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIYKDPDYVRKGDAR 256
Query: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GGVLFPG 265
+ + APE I Y D+WS G ++ E+ G +PG
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLN 128
LG GA + T Q A+K + + ++ R +RE +++ + H+N++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR--SRVFREVEMLYQCQGHRNVLELIE 78
Query: 129 AFTPQKSLEEFQDVYLVMELMDAN--LCQV-IQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + YLV E M L + + + S ++ + + LH+ GI
Sbjct: 79 FFEEEDRF------YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 186 IHRDLKPSNIVVKSD---CTLKILDFGLAR----TAGTTFMMTPYVVT----RYYRAPEV 234
HRDLKP NI+ + +KI DFGL + + TP ++T Y APEV
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 235 ILGMG-----YKENVDIWSVGCIMGEMIRGGVLFPG 265
+ Y + D+WS+G I+ ++ G F G
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 35/239 (14%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGAAYDTAT-------QQNVAIKKLSRPFQNVTHA--K 106
+LP + + R+N LGAGA +++ +K + ++ HA K
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 107 RAY-REFKLMK-LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD--ANLCQVIQMD-- 160
A E K+M L H+NI+ LL A T + + +L++ +V++ D
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA 153
Query: 161 -------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
L + + Q+ G+ L S IHRD+ N+++ + KI DFGLAR
Sbjct: 154 FAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 214 AGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIRGGV-LFPG 265
+ Y+V R APE I Y D+WS G ++ E+ G+ +PG
Sbjct: 214 IMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 87 QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM 146
Q +VAIK L + + + RE ++M +++ I+ L+ + + + LVM
Sbjct: 37 QIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLIGVC-------QAEALMLVM 88
Query: 147 ELMDANLCQVIQMDLDHE----RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
E+ + E ++ LL+Q+ G+K+L +HRDL N+++ +
Sbjct: 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY 148
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRY-------YRAPEVILGMGYKENVDIWSVGCIMGE 255
KI DFGL++ G Y R + APE I + D+WS G M E
Sbjct: 149 AKISDFGLSKALGAD---DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
Query: 256 MIRGG 260
+ G
Sbjct: 206 ALSYG 210
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 86 LLGICL-------TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFG 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 83 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 135
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFG 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 84 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFG 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 85 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFG 219
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 82 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFG 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 141 DVYLVMELMDA---NLCQVIQMDLDHE---RMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
DV++ MELM L + +Q + +M+ + + L +K H G+IHRD+KPSN
Sbjct: 98 DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSN 155
Query: 195 IVVKSDCTLKILDFGLA----------RTAGTTFMMTPYVVTRYYRAPEVILGMGYKENV 244
I++ +K+ DFG++ R+AG M P + P Y
Sbjct: 156 ILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERID-----PPDPTKPDYDIRA 210
Query: 245 DIWSVGCIMGEMIRG 259
D+WS+G + E+ G
Sbjct: 211 DVWSLGISLVELATG 225
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 61 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 114
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 115 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 174
Query: 207 DFGLAR-----TAGTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 175 DFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 234
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 235 PPYPDVNTFD 244
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VAIK+L R + K E +M V++ ++ LL V L+M+LM
Sbjct: 54 VAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLIMQLM 105
Query: 150 D-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
L ++ D+ YLL Q+ G+ +L ++HRDL N++VK+ +KI
Sbjct: 106 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 165
Query: 206 LDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
DFGLA+ G + V + A E IL Y D+WS G + E++ G
Sbjct: 166 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 109 YREFKLMKLV--NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVI-QMDLDHE 164
+RE ++ + V H+NI+G + A K + ++LV + + +L + + + E
Sbjct: 44 FREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 101
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RT 213
M L G+ HLH I HRDLK NI+VK + T I D GLA +
Sbjct: 102 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 161
Query: 214 AGTTFMMTP--YVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGV 261
A T + P V T+ Y APEV+ + M + E+ DI+++G + E+ R GG+
Sbjct: 162 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 221
Query: 262 ----------LFPGTDHIDQWNKII 276
L P +++ K++
Sbjct: 222 HEDYQLPYYDLVPSDPSVEEMRKVV 246
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 109 YREFKLMKLV--NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVI-QMDLDHE 164
+RE ++ + V H+NI+G + A K + ++LV + + +L + + + E
Sbjct: 82 FREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 139
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RT 213
M L G+ HLH I HRDLK NI+VK + T I D GLA +
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199
Query: 214 AGTTFMMTP--YVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGV 261
A T + P V T+ Y APEV+ + M + E+ DI+++G + E+ R GG+
Sbjct: 200 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259
Query: 262 ----------LFPGTDHIDQWNKII 276
L P +++ K++
Sbjct: 260 HEDYQLPYYDLVPSDPSVEEMRKVV 284
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 109 YREFKLMKLV--NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVI-QMDLDHE 164
+RE ++ + V H+NI+G + A K + ++LV + + +L + + + E
Sbjct: 49 FREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 106
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RT 213
M L G+ HLH I HRDLK NI+VK + T I D GLA +
Sbjct: 107 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 166
Query: 214 AGTTFMMTP--YVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGV 261
A T + P V T+ Y APEV+ + M + E+ DI+++G + E+ R GG+
Sbjct: 167 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 226
Query: 262 ----------LFPGTDHIDQWNKII 276
L P +++ K++
Sbjct: 227 HEDYQLPYYDLVPSDPSVEEMRKVV 251
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 109 YREFKLMKLV--NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVI-QMDLDHE 164
+RE ++ + V H+NI+G + A K + ++LV + + +L + + + E
Sbjct: 46 FREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 103
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RT 213
M L G+ HLH I HRDLK NI+VK + T I D GLA +
Sbjct: 104 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 163
Query: 214 AGTTFMMTP--YVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGV 261
A T + P V T+ Y APEV+ + M + E+ DI+++G + E+ R GG+
Sbjct: 164 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 223
Query: 262 ----------LFPGTDHIDQWNKII 276
L P +++ K++
Sbjct: 224 HEDYQLPYYDLVPSDPSVEEMRKVV 248
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 109 YREFKLMKLV--NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVI-QMDLDHE 164
+RE ++ + V H+NI+G + A K + ++LV + + +L + + + E
Sbjct: 43 FREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 100
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RT 213
M L G+ HLH I HRDLK NI+VK + T I D GLA +
Sbjct: 101 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160
Query: 214 AGTTFMMTP--YVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGV 261
A T + P V T+ Y APEV+ + M + E+ DI+++G + E+ R GG+
Sbjct: 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220
Query: 262 ----------LFPGTDHIDQWNKII 276
L P +++ K++
Sbjct: 221 HEDYQLPYYDLVPSDPSVEEMRKVV 245
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 39/205 (19%)
Query: 109 YREFKLMKLV--NHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVI-QMDLDHE 164
+RE ++ + V H+NI+G + A K + ++LV + + +L + + + E
Sbjct: 69 FREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE 126
Query: 165 RMSYLLYQMLCGIKHLH--------SAGIIHRDLKPSNIVVKSDCTLKILDFGLA---RT 213
M L G+ HLH I HRDLK NI+VK + T I D GLA +
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 186
Query: 214 AGTTFMMTP--YVVTRYYRAPEVI---LGMGYKEN---VDIWSVGCIMGEMIR----GGV 261
A T + P V T+ Y APEV+ + M + E+ DI+++G + E+ R GG+
Sbjct: 187 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 246
Query: 262 ----------LFPGTDHIDQWNKII 276
L P +++ K++
Sbjct: 247 HEDYQLPYYDLVPSDPSVEEMRKVV 271
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 51/240 (21%)
Query: 47 HTVDQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHA 105
+ D+W E+ +++ +S ++G+ + G A + VAIK + N +
Sbjct: 15 YVPDEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAAS 68
Query: 106 KRAYREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDL 161
R EF +MK N +++ LL + + Q ++MELM + L
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSL 122
Query: 162 DHE-------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 208
E +M + ++ G+ +L++ +HRDL N +V D T+KI DF
Sbjct: 123 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF 182
Query: 209 GLARTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
G+ R T YYR +PE + + D+WS G ++ E+
Sbjct: 183 GMTRDI---------YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 87 QQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVM 146
Q +VAIK L + + + RE ++M +++ I+ L+ + + + LVM
Sbjct: 363 QIDVAIKVLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRLIGVC-------QAEALMLVM 414
Query: 147 ELMDANLCQVIQMDLDHE----RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCT 202
E+ + E ++ LL+Q+ G+K+L +HR+L N+++ +
Sbjct: 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY 474
Query: 203 LKILDFGLARTAGTTFMMTPYVVTRY-------YRAPEVILGMGYKENVDIWSVGCIMGE 255
KI DFGL++ G Y R + APE I + D+WS G M E
Sbjct: 475 AKISDFGLSKALGAD---DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
Query: 256 MIRGG 260
+ G
Sbjct: 532 ALSYG 536
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 38/203 (18%)
Query: 84 TATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNA------------FT 131
T + VA+K L P + K RE +L+ + H++I+ +
Sbjct: 42 TKDKMLVAVKALKDP--TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 99
Query: 132 PQKSLEEFQDVYL--VMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
L +F + M L+D Q + +L +M ++ Q+ G+ +L S +HRD
Sbjct: 100 KHGDLNKFLRAHGPDAMILVDGQPRQA-KGELGLSQMLHIASQIASGMVYLASQHFVHRD 158
Query: 190 LKPSNIVVKSDCTLKILDFGLARTAGTTFMMTPYVVTRYYRA------------PEVILG 237
L N +V ++ +KI DFG++R + T YYR PE I+
Sbjct: 159 LATRNCLVGANLLVKIGDFGMSRDVYS---------TDYYRVGGHTMLPIRWMPPESIMY 209
Query: 238 MGYKENVDIWSVGCIMGEMIRGG 260
+ D+WS G I+ E+ G
Sbjct: 210 RKFTTESDVWSFGVILWEIFTYG 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 12 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 65
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 180 RDI---------YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 61 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 114
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 115 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 174
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 175 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 234
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 235 PPYPDVNTFD 244
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 99/241 (41%), Gaps = 37/241 (15%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGAAYDTAT-------QQNVAIKKLSRPFQNVTHA--K 106
+LP + + R+N LGAGA +++ +K + ++ HA K
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 107 RAY-REFKLMK-LVNHKNIIGLLNAFT---PQKSLEEFQDVYLVMELM----------DA 151
A E K+M L H+NI+ LL A T P + E+ ++ +
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSY 153
Query: 152 NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
N + L + + Q+ G+ L S IHRD+ N+++ + KI DFGLA
Sbjct: 154 NPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 212 RTAGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIRGGV-LFP 264
R + Y+V R APE I Y D+WS G ++ E+ G+ +P
Sbjct: 214 RDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 270
Query: 265 G 265
G
Sbjct: 271 G 271
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 89 NVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMEL 148
+ A+K L+R ++ + E +MK +H N++ LL L +V+
Sbjct: 55 HCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPY 108
Query: 149 MD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 204
M +L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K
Sbjct: 109 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVK 168
Query: 205 ILDFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIR 258
+ DFGLAR + T + + A E + + D+WS G ++ E M R
Sbjct: 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 228
Query: 259 GGVLFPGTDHID 270
G +P + D
Sbjct: 229 GAPPYPDVNTFD 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 11 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 64
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 179 RDI---------YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 9 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 62
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 63 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 116
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 117 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 176
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 177 RD---------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 5 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 58
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 172
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 173 RDI---------YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 76 LGAGA------AYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLM-KLVNHKNIIGLLN 128
LG GA + T Q A+K + + ++ R +RE +++ + H+N++ L+
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR--SRVFREVEMLYQCQGHRNVLELIE 78
Query: 129 AFTPQKSLEEFQDVYLVMELMDAN--LCQV-IQMDLDHERMSYLLYQMLCGIKHLHSAGI 185
F + YLV E M L + + + S ++ + + LH+ GI
Sbjct: 79 FFEEEDRF------YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 186 IHRDLKPSNIVVKSD---CTLKILDF----GLARTAGTTFMMTPYVVT----RYYRAPEV 234
HRDLKP NI+ + +KI DF G+ + + TP ++T Y APEV
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 235 ILGMG-----YKENVDIWSVGCIMGEMIRGGVLFPG 265
+ Y + D+WS+G I+ ++ G F G
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 62 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 115
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 116 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 176 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 235
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 236 PPYPDVNTFD 245
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 82 LLGICLTST-------VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFG 216
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 80 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 133
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 134 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 193
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 194 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 253
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 254 PPYPDVNTFD 263
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 60 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 113
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 114 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 173
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 174 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 233
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 234 PPYPDVNTFD 243
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 59 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 112
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 113 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 172
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 173 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 232
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 233 PPYPDVNTFD 242
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 62 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 115
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 116 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 176 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 235
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 236 PPYPDVNTFD 245
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 54 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 107
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 108 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 167
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 168 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 227
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 228 PPYPDVNTFD 237
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 3 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 56
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 57 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 110
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 111 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 170
Query: 212 RTAGTTFMMT---PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
R T ++ + +PE + + D+WS G ++ E+
Sbjct: 171 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 111/289 (38%), Gaps = 73/289 (25%)
Query: 41 SVDEREHTVDQWKELIYQELPISHQMGKKRHNTSHLGAG------AAYDTATQQNVAIKK 94
S DE + + + Y + I + H LG G +D ++ VA+K
Sbjct: 4 SDDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMK- 62
Query: 95 LSRPFQNVTHAKRAYREFKLMKLV--------NHKNIIGLLNAFTPQKSLEEFQDVYLVM 146
+ + Q+ T + A E KL+K V N ++ L++ F + S V +V
Sbjct: 63 VVKSAQHYT--ETALDEIKLLKCVRESDPSDPNKDMVVQLIDDF--KISGMNGIHVCMVF 118
Query: 147 ELMDANLCQVI----QMDLDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSD- 200
E++ +L + I L + ++ Q+L G+ +LHS IIH D+KP NI++ D
Sbjct: 119 EVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDD 178
Query: 201 ----------------------------------------------CTLKILDFGLARTA 214
+KI D G A
Sbjct: 179 AYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWV 238
Query: 215 GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGGVLF 263
F T + TR YR+ EV++G GY DIWS C+ E+ G LF
Sbjct: 239 HKHF--TEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLF 285
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 1 MLVIDPEKRISVDDALMHPYIN 22
ML + PEKR S + L HP++N
Sbjct: 367 MLEMVPEKRASAGECLRHPWLN 388
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 12 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 65
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 66 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 119
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 120 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 179
Query: 212 RTAGTTFMMT---PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
R T ++ + +PE + + D+WS G ++ E+
Sbjct: 180 RDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 11 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 64
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 65 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 118
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 119 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 179 RD---------IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 62 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 115
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 116 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 176 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 235
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 236 PPYPDVNTFD 245
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 60 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 113
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 114 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 173
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 174 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 233
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 234 PPYPDVNTFD 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 81 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 134
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K+L S +HRDL N ++ T+K+
Sbjct: 135 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA 194
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 195 DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 254
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 255 PPYPDVNTFD 264
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 67 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 120
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 121 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 180
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 181 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 240
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 241 PPYPDVNTFD 250
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 40 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 93
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 94 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 147
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N +V D T+KI DFG+
Sbjct: 148 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 207
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 208 RDI---------YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 63 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 116
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 117 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 176
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 177 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 236
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 237 PPYPDVNTFD 246
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 62 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 115
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 116 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 175
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 176 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 235
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 236 PPYPDVNTFD 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 121 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 174
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 175 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 234
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 235 DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 294
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 295 PPYPDVNTFD 304
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 59 ELPISHQMGKKRHNTSH---LGAGAAYDTAT-------QQNVAIKKLSRPFQNVTHA--K 106
+LP + + R+N LGAGA +++ +K + ++ HA K
Sbjct: 34 QLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK 93
Query: 107 RAY-REFKLMK-LVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD--ANLCQVIQMD-- 160
A E K+M L H+NI+ LL A T + + +L++ +V++ D
Sbjct: 94 EALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPA 153
Query: 161 -------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213
+ + Q+ G+ L S IHRD+ N+++ + KI DFGLAR
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 214 AGTTFMMTPYVVTRYYR------APEVILGMGYKENVDIWSVGCIMGEMIRGGV-LFPG 265
+ Y+V R APE I Y D+WS G ++ E+ G+ +PG
Sbjct: 214 IMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTTFMMTPYVVTRYYRAP 232
G+ +LH+ IIHRD+K NI++ + KI DFG+++ G T + T Y P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 233 EVILGMGYKENVDIWSVGCIMGEMI 257
E + E D++S G ++ E++
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 91 AIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMD 150
A+K L+R ++ + E +MK +H N++ LL L +V+ M
Sbjct: 63 AVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-----CLRSEGSPLVVLPYMK 116
Query: 151 -ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL 206
+L I+ + + + L+ Q+ G+K L S +HRDL N ++ T+K+
Sbjct: 117 HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA 176
Query: 207 DFGLARTA-----GTTFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE-MIRGG 260
DFGLAR + T + + A E + + D+WS G ++ E M RG
Sbjct: 177 DFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 236
Query: 261 VLFPGTDHID 270
+P + D
Sbjct: 237 PPYPDVNTFD 246
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 138 EFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
E + LVME+ + L + +Q + + + + L++Q+ G+K+L + +HRDL N
Sbjct: 440 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 499
Query: 195 IVVKSDCTLKILDFGLART--------AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
+++ + KI DFGL++ T P ++Y APE I + D+
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP---VKWY-APECINYYKFSSKSDV 555
Query: 247 WSVGCIMGEMIRGG 260
WS G +M E G
Sbjct: 556 WSFGVLMWEAFSYG 569
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 138 EFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194
E + LVME+ + L + +Q + + + + L++Q+ G+K+L + +HRDL N
Sbjct: 441 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 500
Query: 195 IVVKSDCTLKILDFGLART--------AGTTFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
+++ + KI DFGL++ T P ++Y APE I + D+
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP---VKWY-APECINYYKFSSKSDV 556
Query: 247 WSVGCIMGEMIRGG 260
WS G +M E G
Sbjct: 557 WSFGVLMWEAFSYG 570
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTTFMM 220
L++Q+ G+K+L + +HRDL N+++ + KI DFGL++ T
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
P ++Y APE I + D+WS G +M E G
Sbjct: 192 WP---VKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 227
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTTFMM 220
L++Q+ G+K+L + +HRDL N+++ + KI DFGL++ T
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
P ++Y APE I + D+WS G +M E G
Sbjct: 192 WP---VKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 227
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 51/237 (21%)
Query: 50 DQWKELIYQELPISHQMGKKRHNTSHLG-AGAAYDTATQQNVAIKKLSRPFQNVTHAKRA 108
D+W E+ +++ +S ++G+ + G A + VAIK + N + R
Sbjct: 5 DEW-EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-----NEAASMRE 58
Query: 109 YREF----KLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHE 164
EF +MK N +++ LL + + Q ++MELM + L E
Sbjct: 59 RIEFLNEASVMKEFNCHHVVRLLGVVS------QGQPTLVIMELMTRGDLKSYLRSLRPE 112
Query: 165 -------------RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
+M + ++ G+ +L++ +HRDL N V D T+KI DFG+
Sbjct: 113 MENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMT 172
Query: 212 RTAGTTFMMTPYVVTRYYR------------APEVILGMGYKENVDIWSVGCIMGEM 256
R T YYR +PE + + D+WS G ++ E+
Sbjct: 173 RDI---------YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 82 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 134
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFG 216
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 84 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFG 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 14/197 (7%)
Query: 60 LPISHQMGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVN 119
L ++G+ T + G DT T VA +L + +R E + +K +
Sbjct: 28 LKFDIEIGRGSFKTVYKG----LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 120 HKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYL---LYQMLCG 176
H NI+ +++ + +++ + + LV EL + + ++ L Q+L G
Sbjct: 84 HPNIVRFYDSW--ESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKG 141
Query: 177 IKHLHSAG--IIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTTFMMTPYVVTRYYRAPE 233
++ LH+ IIHRDLK NI + ++KI D GLA +F + T + APE
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA-VIGTPEFXAPE 200
Query: 234 VILGMGYKENVDIWSVG 250
Y E+VD+++ G
Sbjct: 201 X-YEEKYDESVDVYAFG 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 92 LLGICLTS-------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 144
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 145 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 205 IYTHQSDVWSYGVTVWELMTFG 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 85 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFG 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTTFMM 220
L++Q+ G+K+L + +HRDL N+++ + KI DFGL++ T
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
P ++Y APE I + D+WS G +M E G
Sbjct: 190 WP---VKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 225
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 85 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFG 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 76 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 128
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFG 210
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 88 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 140
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 201 IYTHQSDVWSYGVTVWELMTFG 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 107 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 159
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 160 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 220 IYTHQSDVWSYGVTVWELMTFG 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 21/144 (14%)
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMDAN-LCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG 184
L+ AF + SL + YL ++ N LC V + +SYL + H
Sbjct: 90 LITAFHDKGSLTD----YLKGNIITWNELCHVAETM--SRGLSYLHEDVPWCRGEGHKPS 143
Query: 185 IIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTTFMMTPYVVTRYYRAPEVILG- 237
I HRD K N+++KSD T + DFGLA + G T V TR Y APEV+ G
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ---VGTRRYMAPEVLEGA 200
Query: 238 MGYKEN----VDIWSVGCIMGEMI 257
+ ++ + +D++++G ++ E++
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELV 224
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTTFMM 220
L++Q+ G+K+L + +HRDL N+++ + KI DFGL++ T
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
P ++Y APE I + D+WS G +M E G
Sbjct: 172 WP---VKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 207
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 84 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFG A+ G + V + A E IL
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFG 218
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 85 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 137
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFG 219
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 84 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 136
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFG A+ G + V + A E IL
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFG 218
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 139 FQD---VYLVMEL-MDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
FQD +YLVME + +L ++ + E + L +++ I +H G +HRD+K
Sbjct: 130 FQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIK 189
Query: 192 PSNIVVKSDCTLKILDFG--LARTAGTTFMMTPYVVTRYYRAPEVILGMGYKE------- 242
P NI++ +++ DFG L A T V T Y +PE++ +G
Sbjct: 190 PDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGP 249
Query: 243 NVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKII 276
D W++G EM G F + + KI+
Sbjct: 250 ECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+M+LM L ++ D+ YLL Q+ G+ +L
Sbjct: 86 LLGICLTST-------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 138
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFG A+ G + V + A E IL
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFG 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 169 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART--------AGTTFMM 220
L++Q+ G+K+L + +HRDL N+++ + KI DFGL++ T
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
P ++Y APE I + D+WS G +M E G
Sbjct: 182 WP---VKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYG 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 90 VAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELM 149
VAIK+L R + K E +M V++ ++ LL V L+ +LM
Sbjct: 47 VAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-------VQLITQLM 98
Query: 150 D-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKI 205
L ++ D+ YLL Q+ G+ +L ++HRDL N++VK+ +KI
Sbjct: 99 PFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKI 158
Query: 206 LDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGG 260
DFGLA+ G + V + A E IL Y D+WS G + E++ G
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 66 MGKKRHNTSHLGAGAAYDTATQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIG 125
+G T + G + VAIK+L R + K E +M V++ ++
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 126 LLNAFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLL---YQMLCGIKHLH 181
LL V L+ +LM L ++ D+ YLL Q+ G+ +L
Sbjct: 89 LLGICLTST-------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE 141
Query: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---TFMMTPYVVTRYYRAPEVILGM 238
++HRDL N++VK+ +KI DFGLA+ G + V + A E IL
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 239 GYKENVDIWSVGCIMGEMIRGG 260
Y D+WS G + E++ G
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFG 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,225,114
Number of Sequences: 62578
Number of extensions: 391622
Number of successful extensions: 3684
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 1438
length of query: 288
length of database: 14,973,337
effective HSP length: 98
effective length of query: 190
effective length of database: 8,840,693
effective search space: 1679731670
effective search space used: 1679731670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)