RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy11582
(1760 letters)
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common
bacterial type. SMC (structural maintenance of
chromosomes) proteins bind DNA and act in organizing and
segregating chromosomes for partition. SMC proteins are
found in bacteria, archaea, and eukaryotes. This family
represents the SMC protein of most bacteria. The smc gene
is often associated with scpB (TIGR00281) and scpA genes,
where scp stands for segregation and condensation
protein. SMC was shown (in Caulobacter crescentus) to be
induced early in S phase but present and bound to DNA
throughout the cell cycle [Cellular processes, Cell
division, DNA metabolism, Chromosome-associated
proteins].
Length = 1179
Score = 92.0 bits (229), Expect = 2e-18
Identities = 162/802 (20%), Positives = 320/802 (39%), Gaps = 79/802 (9%)
Query: 421 QVTSLTSQLDQTKAQLAQVGREKEA----LVKNIEMLRVEKSALEKNKREINEMVESLNS 476
Q+ SL Q ++ + +E LV +E LR E L++ +E E +E L +
Sbjct: 201 QLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTA 260
Query: 477 NLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLI 536
L ++++ L L+ E LQ EL + +++ E + + + L L
Sbjct: 261 ELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEE 320
Query: 537 ANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEIT 596
L+ + + L + E++ L +++ +EAE+E L + ++ ++ + E
Sbjct: 321 LEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQ 380
Query: 597 IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESL 656
+E ++ +L+ Q+ASL ++ E LEA L + E+ + E+L +++E + + L
Sbjct: 381 LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA--ELKEL 438
Query: 657 KGQVVRLNKELEDTEKRAQETKASL-------------VQQASGLDADYQNQISNLKKQN 703
+ ++ L +ELE+ ++ + + +L + A A Q ++ +L++
Sbjct: 439 QAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQ 498
Query: 704 EECVTKLTEEKINLKKQNEE-----CVTKLTEEKEQVRAALEKKLHATVKQITEEKD--- 755
E K LK Q+ +++L E AA+E L ++ + E
Sbjct: 499 ENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAA 558
Query: 756 -------CELSRLQANLCQLQSHID-KICQQHEDALLRAEGDKQQALLIAQQD---QKAI 804
+ + L S +I + L EG A + + D +KA+
Sbjct: 559 KKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKAL 618
Query: 805 QDRLSQVL------------KELEEEK--CTLDRIKRESAGRSEQDRNTINTLREQLNRT 850
L VL K+L TLD G N+ + R
Sbjct: 619 SYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRRE 678
Query: 851 VAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLET 910
+ +LEE EE+ A LE+ +++L+ E E L E E+L+ +L ++ ++
Sbjct: 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD---- 734
Query: 911 ARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTI 970
L E E L + + L + E ++ + ++ E + + E+E + I
Sbjct: 735 ---LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI 791
Query: 971 DEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKF 1030
++ +E +ALR L++ ++ L +E + L+ + + +
Sbjct: 792 EQLK---------EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLED 842
Query: 1031 LEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKY 1090
LE + E+ + I + E+ ++ + +L +L L ++ ++ E LA L+ +
Sbjct: 843 LEEQIEELSEDIE------SLAAEIEELEELIEELESELEALLNERASLEEALALLRSEL 896
Query: 1091 EQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERV-----RASSAHLLQLEAS 1145
E+ E + +L +E EE L L RL G E R+ R S + L LE +
Sbjct: 897 EELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEA 956
Query: 1146 KKDVEHKLSSIGSTLRRIAALR 1167
+ RR+ L
Sbjct: 957 EALENKIEDDEEEARRRLKRLE 978
Score = 82.8 bits (205), Expect = 1e-15
Identities = 155/807 (19%), Positives = 318/807 (39%), Gaps = 103/807 (12%)
Query: 810 QVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEE-EKAIL 868
+ ++LE + LDR++ +E +R + +L Q + + +ELK E E A+L
Sbjct: 176 ETERKLERTRENLDRLE---DILNELERQ-LKSLERQAEKAE-RYKELKAELRELELALL 230
Query: 869 ERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDL 928
++ +L+ E E L E +E + +L ++ ++ +L E + E E E L+K+L
Sbjct: 231 VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKEL 290
Query: 929 LDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQA 988
++ +K + +L ++++E++ + +DE +E
Sbjct: 291 YALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELA---------EELAE 341
Query: 989 LRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCL 1048
L +L + ++ SL+ EL + E +L+S L+E+ LE + K
Sbjct: 342 LEEKLEELKEELESLEAELEELEAELEELESRLEELEEQ---LETLRSKV---------- 388
Query: 1049 FQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLV 1108
Q+E++++ + + L +L L+ ++E + +++ L +K L++L
Sbjct: 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKK---------LEEAELKELQ 439
Query: 1109 KECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRY 1168
E EE E L +L +E + L +L ++ E L + L ++ A
Sbjct: 440 AELEELEEELEEL-------QEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
Query: 1169 HAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSDL----ERYRAA-----QLHAESLLE 1219
E ++A + S+L E Y AA ++++
Sbjct: 493 SLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVV 552
Query: 1220 AREKSHRQQVNRLENQLDGRA------SHAGGKMTSPSRRYSPVRGGEGGEG--LIDVDP 1271
+ ++ + L+ GR S G ++ R G G L+ DP
Sbjct: 553 ENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDP 612
Query: 1272 EIVRKGVRNLMQQVAQIE---------------------------------RERDDLKAM 1298
++ RK + L+ V ++ +
Sbjct: 613 KL-RKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSS 671
Query: 1299 TQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQK 1358
+REI++L + + K+A+ ++ + L++E LE +L Q + S +
Sbjct: 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISAL 731
Query: 1359 NEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARV 1418
++L L +V LE ++ +S+E ++ + ++ + E + E + E+ EA++
Sbjct: 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI 791
Query: 1419 TKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLN 1478
+L+ + AL L+ L L+ER E R I E R L+ I++L+
Sbjct: 792 EQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS 851
Query: 1479 LTLERASA-------GETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKR 1531
+E +A EL E++ L +L++L + L E+++
Sbjct: 852 EDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRS 911
Query: 1532 VLQERLDTCQASLAELRRQQVNRLENQ 1558
L+ L+ + LA+L + LE +
Sbjct: 912 ELRRELEELREKLAQLELRL-EGLEVR 937
Score = 73.6 bits (181), Expect = 8e-13
Identities = 82/386 (21%), Positives = 170/386 (44%), Gaps = 28/386 (7%)
Query: 385 SVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKE 444
S + ++ E++ ++++ + + L +L++ + +L Q+ +E E
Sbjct: 670 SSILERRREIEELEEKIEELEEKIAEL-------EKALAELRKELEELEEELEQLRKELE 722
Query: 445 ALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQN 504
L + I LR + + LE ++ E + L+ L +++ L + E + E +
Sbjct: 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA 782
Query: 505 ELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAH 564
E++ + + ++ + EL+ + LR +L + NE+ N + E LE+ + L
Sbjct: 783 EIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLED 842
Query: 565 IEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAI 624
+E+ ++ ++E L + ++ E I + E +EA E L+E LA LRS+ E L
Sbjct: 843 LEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEE 902
Query: 625 LFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVV----RLNKELEDTEKRAQETKAS 680
L + +S + + E+L ++ +L ++ E L+ ++ RL++E T + A+ +
Sbjct: 903 LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENK 962
Query: 681 LVQQASGLD---ADYQNQISNLKKQNEECVT---KLTEEKINLKKQNEECVTKLTEEKEQ 734
+ +N+I L N + +L E L Q E+ LTE KE
Sbjct: 963 IEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKED----LTEAKET 1018
Query: 735 VRAALEK-------KLHATVKQITEE 753
+ A+E+ + T Q+ E
Sbjct: 1019 LEEAIEEIDREARERFKDTFDQVNEN 1044
Score = 70.9 bits (174), Expect = 6e-12
Identities = 163/841 (19%), Positives = 331/841 (39%), Gaps = 104/841 (12%)
Query: 285 QVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNT 344
++ L+ E + E K+ EE +EEL + LE ++EE L V E+++E+E LQ
Sbjct: 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELR---LEVSELEEEIEELQKE 289
Query: 345 LRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTM 404
L +A + R E + RE+L +
Sbjct: 290 LYALANEIS-----------------------------------RLEQQKQILRERLANL 314
Query: 405 KKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNK 464
++Q E + + ++ L +L + + +L ++ E E+L +E L E LE
Sbjct: 315 ERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRL 374
Query: 465 REINEMVESLNSNLD----KVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREV-- 518
E+ E +E+L S + ++ N+ + ++ L+ + + I + E
Sbjct: 375 EELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAE 434
Query: 519 --ELRGKEDMNRRLREDLLIANEDLKNA-KLAKELLEQNKEEMQTLLAHIEKSKGDVEAE 575
EL+ + + E+L E L+ A + +E LE+ ++ + + + + +++
Sbjct: 435 LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDS- 493
Query: 576 MERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLE-AILFDTQSHLEQ 634
+ERL + E S+ + N L + L+ L S E E AI L+
Sbjct: 494 LERLQEN----LEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQA 549
Query: 635 SDVKKEQLEHEVQELLVKQESLKGQVVRLN----KELEDTEKRAQETKASLVQQASGL-- 688
V+ + L + E + + L+ E++ ++ + + A L
Sbjct: 550 VVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVK 609
Query: 689 -DADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRA-ALEKKLHAT 746
D + +S L V L + + L K+ +T + + VR + A
Sbjct: 610 FDPKLRKALSYL-LGGVLVVDDL-DNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAK 667
Query: 747 VKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQD 806
E+ E+ L+ + +L+ I ++ + + +++ + +++
Sbjct: 668 TNSSILERRREIEELEEKIEELEEKIAELEKALAEL---------------RKELEELEE 712
Query: 807 RLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKA 866
L Q+ KELEE + + R+ R E + + QL++ + +LE EE
Sbjct: 713 ELEQLRKELEELSRQISAL-RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
Query: 867 ILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRK 926
E ++++ ++E E L + E+LK +L + +D ++A+L ESL +
Sbjct: 772 EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLER 831
Query: 927 DLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEK 986
+ T+ L D + ++L E ++ + +E + I+E ++ +E+
Sbjct: 832 RIAATERRLEDL-------EEQIEELSEDIESLAAEIEELEELIEELESELEAL--LNER 882
Query: 987 QALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLL 1046
+L L +++ L +EL + E R +L E L+EK LE+ E I L
Sbjct: 883 ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQ 942
Query: 1047 CLFQVEVELSQ---------VTKDRSDLSHQLSLLQRKKEN-------VVEDLARLKQKY 1090
E L+ + D + +L L+ K + +E+ LK++Y
Sbjct: 943 ERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERY 1002
Query: 1091 E 1091
+
Sbjct: 1003 D 1003
Score = 70.5 bits (173), Expect = 7e-12
Identities = 66/322 (20%), Positives = 145/322 (45%), Gaps = 6/322 (1%)
Query: 1274 VRKGVRNLMQQVAQIERERDDLKAMTQA----LKREIKDLSDAHTQESNKMAQAQQTMRA 1329
+ + +++L +Q + ER ++ + + L +++L + + ++ +A++ +
Sbjct: 198 LERQLKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEE 257
Query: 1330 LQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDK 1389
L E LE KL + + + E +++ +EL L ++ LE + E + + +
Sbjct: 258 LTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQ 317
Query: 1390 LMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKL 1449
L + L+++ L +EL+ E ++ +L+ + +LE + + L+ L+E E+ L +L
Sbjct: 318 LEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEEL 377
Query: 1450 QERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNS 1509
+E+ E + LE + SL I++L LER L+ EI+ L + L + L
Sbjct: 378 EEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE 437
Query: 1510 QSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALK 1569
+L++L++ L + E L+E L+ + L E + L+A +L+
Sbjct: 438 LQ--AELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE 495
Query: 1570 REIKDLSDAHTQESNKMAQAQQ 1591
R ++L +
Sbjct: 496 RLQENLEGFSEGVKALLKNQSG 517
Score = 65.5 bits (160), Expect = 3e-10
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 1410 ELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTS 1469
E+ E ++ +LE + LE L+ L+E E L +L++ E R I+ L +
Sbjct: 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLAR 737
Query: 1470 LKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENE 1529
L+ ++QL + + S TEL EI+ L+ L + ++++L+ + + E
Sbjct: 738 LEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEE 797
Query: 1530 KRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQA 1589
+ L+E LD +A L L + N E + L+ A +R ++DL + + S +
Sbjct: 798 LKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESL 857
Query: 1590 QQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQLRMSQWPSESPMNGGD 1649
+ L+E LE++L NE E A A L S+L S
Sbjct: 858 AAEIEELEELIEELESELEAL------LNERASLEEALALLRSELE-----ELSEELREL 906
Query: 1650 SEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKR 1687
+ ++L RE ELR KL L +++ L ++++ +R
Sbjct: 907 ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
Score = 63.9 bits (156), Expect = 6e-10
Identities = 132/715 (18%), Positives = 278/715 (38%), Gaps = 105/715 (14%)
Query: 268 TNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQN 327
L ++ EL++Q+ L+S+ + +A E + EE++EEL + + +LEA +EE +
Sbjct: 307 LRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEA- 365
Query: 328 VLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVT 387
+EE++ LE L+ L + V Q
Sbjct: 366 --ELEELESRLEELEEQLETLRSKVAQ--------------------------------- 390
Query: 388 FRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLD--QTKAQLAQVGREKEA 445
E ++A+ ++ ++ + E ++ + + Q++ L +L+ + K A++ +E
Sbjct: 391 --LELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEE 448
Query: 446 LVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKIN------ESLQSEK 499
L + E L + ALE+ + E+ E ++L++ ++ + +RL + E
Sbjct: 449 LEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
Query: 500 LFLQNELDRINSDM----DAREVELRGKEDMNRRLREDL-LIANEDLKNAKLAKELLEQN 554
L ++ + + V+ + + L L + E+L AK A L+QN
Sbjct: 509 KALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQN 568
Query: 555 KEEMQTLLA-------HIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEA-------- 599
+ T L I+ + ++ +E L D+ + K +
Sbjct: 569 ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVV 628
Query: 600 -------NDKELQRLQEQLASLRSDK-----------ESLEAILFDTQSHLEQSDVKKEQ 641
+ R ++ +L D + + + + +E+ + K E+
Sbjct: 629 DDLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEE 688
Query: 642 LEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQ--NQISNL 699
LE ++ EL L+ ++ L +ELE K +E + L Q+
Sbjct: 689 LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEER 748
Query: 700 KKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKL------HATVKQITEE 753
Q + +T+L E L+++ EE +L E E LE ++ +++ +E
Sbjct: 749 IAQLSKELTELEAEIEELEERLEEAEEEL-AEAEAEIEELEAQIEQLKEELKALREALDE 807
Query: 754 KDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQ---------DQKAI 804
EL+ L L+ ++ + ++ R E ++Q +++ + + +
Sbjct: 808 LRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEEL 867
Query: 805 QDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEE 864
+ L L+ L E+ +L+ E+ + L + + +LEEL+ + +
Sbjct: 868 IEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
Query: 865 KAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAEN 919
+ LE + + +E L SEE + L +E + ++ E RRLK EN
Sbjct: 928 ELRLEGLEVRIDNLQERL---SEEYSLTLEEAEALENKIEDDEEEARRRLKRLEN 979
Score = 62.0 bits (151), Expect = 3e-09
Identities = 58/299 (19%), Positives = 121/299 (40%), Gaps = 15/299 (5%)
Query: 1278 VRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYAL 1337
+ L + +A++ +E ++L+ + L++E+++LS + +A+ + + L+E L
Sbjct: 693 IAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQL 752
Query: 1338 ETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESG 1397
+L++ +A E +++ EEL ++ LE + + EE
Sbjct: 753 SKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKA------------ 800
Query: 1398 ARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQC 1457
L L+ EL+ L + +LE + L++ E + +L E E
Sbjct: 801 --LREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLA 858
Query: 1458 RNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLK 1517
I LEE L++ ++ L LR E++ L L + +L+
Sbjct: 859 AEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELE 918
Query: 1518 QLQKLLHSAENEKRVLQERLDTCQASLAEL-RRQQVNRLENQDDLKAMTQALKREIKDL 1575
+L++ L E L+ R+D Q L+E ++ ++ + +R +K L
Sbjct: 919 ELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRL 977
Score = 57.4 bits (139), Expect = 8e-08
Identities = 59/292 (20%), Positives = 128/292 (43%), Gaps = 15/292 (5%)
Query: 270 AEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVL 329
++L +E EL+ ++ + E + E ++ EE++EEL + LE +EE + +
Sbjct: 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELY 291
Query: 330 ----LVEEMQQELELLQNTLRDIARAVIQ-DAEGKDIPSRPAPLKRHATFSARPSTSIKP 384
+ ++Q+ ++L+ L ++ R + + +A+ +++ S+ L +K
Sbjct: 292 ALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKE 351
Query: 385 SVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKE 444
+ E +L +L ++ + E +E + +V L Q+ ++ ++ E
Sbjct: 352 ELE-SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLE 410
Query: 445 ALVKNIEMLRVEKSALEK-----NKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEK 499
L E L+ E L K +E+ +E L L+++Q+ RL + E L+ E
Sbjct: 411 RLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
Query: 500 LFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELL 551
+ LD ++ +L+ + D RL+E+L +E +K + L
Sbjct: 471 EEAEQALDAAERELA----QLQARLDSLERLQENLEGFSEGVKALLKNQSGL 518
Score = 53.5 bits (129), Expect = 1e-06
Identities = 60/308 (19%), Positives = 124/308 (40%), Gaps = 22/308 (7%)
Query: 1203 DLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGGEG 1262
+LE + LE R+++ LE +L+ S
Sbjct: 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRK------- 733
Query: 1263 GEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQ 1322
D + V L +++AQ+ +E +L+A + L+ +++ + + ++ +
Sbjct: 734 -------DLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEE 786
Query: 1323 AQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEE 1382
+ + L+EE AL L + +A +E E L+ L ++ E L ++ E+
Sbjct: 787 LEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQ 846
Query: 1383 KSQGDDKLMK-------CRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRL 1435
+ + + E L++E AL +E + E + L + L + + L
Sbjct: 847 IEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
Query: 1436 QMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTI-DQLNLTLERASAGETELRGE 1494
+ E L +L+E+ + GLE R +L+ + ++ +LTLE A A E ++ +
Sbjct: 907 ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDD 966
Query: 1495 IQTLQRNL 1502
+ +R L
Sbjct: 967 EEEARRRL 974
Score = 52.0 bits (125), Expect = 4e-06
Identities = 75/338 (22%), Positives = 155/338 (45%), Gaps = 23/338 (6%)
Query: 597 IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEV-----QELLV 651
+E + L RL++ L L +SLE + + E + +LE + +EL
Sbjct: 181 LERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKA-ELRELELALLVLRLEELRE 239
Query: 652 KQESLKGQVVRLNKELEDTEKRAQETKASLVQ---QASGLDADYQNQISNLKKQNEECVT 708
+ E L+ ++ +ELE+ QE + L + + S L+ + + L E ++
Sbjct: 240 ELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANE-IS 298
Query: 709 KLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQL 768
+L ++K L+++ +L E + Q+ K + E + +L L+ L L
Sbjct: 299 RLEQQKQILRERLANLERQLEELEAQLEELESKLDEL--AEELAELEEKLEELKEELESL 356
Query: 769 QSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRE 828
++ ++++ + E+ R E + ++ L + ++ +++ + E+E + L+R++
Sbjct: 357 EAELEELEAELEELESRLE-ELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED- 414
Query: 829 SAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE 888
R E+ + I L ++L A+L+EL+ EE + LE +L+ E E L EE
Sbjct: 415 ---RRERLQQEIEELLKKLEE--AELKELQAELEELEEELE----ELQEELERLEEALEE 465
Query: 889 LKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRK 926
L+ +L +E +D + +L + RL E + E+L
Sbjct: 466 LREELEEAEQALDAAERELAQLQARLDSLERLQENLEG 503
Score = 50.4 bits (121), Expect = 1e-05
Identities = 67/360 (18%), Positives = 139/360 (38%), Gaps = 37/360 (10%)
Query: 230 QSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVL 289
E++L ++R +L + +RQ+S L L A +L KE +EL++++ L
Sbjct: 707 LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
Query: 290 KSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIA 349
+ + EE + E I LEA++E+ + + + E EL L + A
Sbjct: 767 EERLE-------EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEA 819
Query: 350 RAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYE 409
+ + E + R A +R ++ E + ++ + E
Sbjct: 820 ANLRERLE--SLERRIAATERRLEDLEE---------------QIEELSEDIESLAAEIE 862
Query: 410 SADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINE 469
+E + ++ +L ++ + LA + E E L + + L ++S L + E+ E
Sbjct: 863 ELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELRE 922
Query: 470 MVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRR 529
+ L L+ ++ R+ + E L E L+ + + E + +R
Sbjct: 923 KLAQLELRLEGLE---VRIDNLQERLSEE---YSLTLEEAEALENKIEDDEEEARRRLKR 976
Query: 530 LREDL-------LIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLD 582
L + L A E+ + K + L KE++ +E++ +++ E D
Sbjct: 977 LENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERFKD 1036
Score = 37.0 bits (86), Expect = 0.12
Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 3/156 (1%)
Query: 1565 TQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQN---ELE 1621
+REI++L + + K+A+ ++ + L++E LE +L Q + +
Sbjct: 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISAL 731
Query: 1622 VKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQL 1681
K++AR E + + S EI +L E +L +I+ L Q+
Sbjct: 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQI 791
Query: 1682 NSEIKRRQLYIYRDTRAGKEMQQLRQALGDSLRTVA 1717
+ + E+ L + + +
Sbjct: 792 EQLKEELKALREALDELRAELTLLNEEAANLRERLE 827
Score = 34.6 bits (80), Expect = 0.64
Identities = 50/247 (20%), Positives = 94/247 (38%), Gaps = 15/247 (6%)
Query: 112 ALDAAQAHLREMREERIQDLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTN 171
L L E E+ ++L R++ R++ +L +E++ + L
Sbjct: 702 ELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
Query: 172 DLEKLTTDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALWRDVVDIKRSFTAMQS 231
++E+L EE+A E + E E + L R+ +D R A +
Sbjct: 762 EIEELEERLEEAEEELAEAEAEIEELEAQIE-----QLKEELKALREALDELR---AELT 813
Query: 232 ATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKS 291
++ + +R L R+++ L L + + + L E EL+ + L+S
Sbjct: 814 LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
Query: 292 ENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARA 351
E A+ NE EE + L + +EE + + +E + EL LR+
Sbjct: 874 ELEALLNERASLEEA-------LALLRSELEELSEELRELESKRSELRRELEELREKLAQ 926
Query: 352 VIQDAEG 358
+ EG
Sbjct: 927 LELRLEG 933
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and
chromosome partitioning].
Length = 1163
Score = 91.3 bits (227), Expect = 3e-18
Identities = 174/855 (20%), Positives = 359/855 (41%), Gaps = 56/855 (6%)
Query: 860 RTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAEN 919
RTEE LE + +L+ + E L ++E+ + L + + +L +LKE
Sbjct: 183 RTEENLERLEDLLEELEKQLEKLERQAEKAERYQELKAELRE---LELALLLAKLKELRK 239
Query: 920 VGESLRKDLLDTKTHLADSNFEKDKYAKSN-------KDLREMVKKVESEKRDQARTIDE 972
E L ++L + L + E ++ K ++LRE +++++ E + I+E
Sbjct: 240 ELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLELKEEIEE 299
Query: 973 GLQKIAV-----RFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEK 1027
+I++ ++E + L +L + + +LK+EL + E + +L+ L+E
Sbjct: 300 LEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEA 359
Query: 1028 CKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLK 1087
+ LE + + L + EL+++ + +++ ++L L+R+ E++ E L RL
Sbjct: 360 KEELEEKLSALLEELEELFE--ALREELAELEAELAEIRNELEELKREIESLEERLERLS 417
Query: 1088 QKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKK 1147
++ E E + LE+L E EE L +L +L +R++ L +L+ +
Sbjct: 418 ERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQ 477
Query: 1148 DVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSDLERY 1207
+E +LSS+ + L R+ A + + + EA + + Y + +
Sbjct: 478 RLEKELSSLEARLDRLEAEQRASQGVRAVLEALESGLPGVYGPV-AELIKVKEKYETALE 536
Query: 1208 RAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAG-GKMTSPSRRYSPVRGGEGGEG- 1265
A ++++ E+ ++ + L+ GRA+ ++ S G G
Sbjct: 537 AALGNRLQAVVVENEEVAKKAIEFLKENKAGRATFLPLDRIKPLRSLKSDAAPGFLGLAS 596
Query: 1266 -LIDVDPEIVRKGVRNLMQQV------AQIERERDDLKAMTQALKREIKDLSDAH----- 1313
LID DP+ VR ++ Q R L+ + + + + +
Sbjct: 597 DLIDFDPKY-EPAVRFVLGDTLVVDDLEQARRLARKLRIKYRIVTLDGDLVEPSGSITGG 655
Query: 1314 TQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLE 1373
++ ++ ++ L+EE LE +L + + S + + L+ LR ++ LE
Sbjct: 656 SRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELE 715
Query: 1374 LTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQ 1433
L + E + +++L + + L+ E L++EL + R+ +LE + +LE
Sbjct: 716 RQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALA 775
Query: 1434 RLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRG 1493
+L+ ++E E LQE E + E R +L+ ++ L ER EL
Sbjct: 776 KLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEE 835
Query: 1494 EIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVN 1553
EI+ L+ L + + ++L++L++ L E EK L++ L + EL +
Sbjct: 836 EIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEE--- 892
Query: 1554 RLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAA 1613
+L++ LK EI+ L + + K+ + + + L+EE +T+
Sbjct: 893 ----LRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLETEL- 947
Query: 1614 ANSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDK 1673
+ E+E E L P+N EE ++ EL+++ E+L +
Sbjct: 948 ---EREIERLEEEIEALG------------PVNLRAIEEYEEVEERYEELKSQREDLEEA 992
Query: 1674 IQMLRDQLNSEIKRR 1688
+ L + + K +
Sbjct: 993 KEKLLEVIEELDKEK 1007
Score = 79.8 bits (197), Expect = 1e-14
Identities = 165/857 (19%), Positives = 355/857 (41%), Gaps = 100/857 (11%)
Query: 427 SQLDQTKAQLAQVGREKEALVKNIEMLRVEKSAL--------EKNKREINEMVESLNSNL 478
+L++T+ L ++ E L K +E L + E + E+ ++ L
Sbjct: 179 RKLERTEENLERLEDLLEELEKQLEKLERQAEKAERYQELKAELRELELALLLAKLKELR 238
Query: 479 DKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIAN 538
++++ LS++ E L+ + L+ I EL+ + + LRE+L
Sbjct: 239 KELEELEEELSRLEEELEELQEELEEAEKEIE--------ELKSELE---ELREELEELQ 287
Query: 539 EDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIE 598
E+L K E LE ++ L +E ++E +E L + E++ + E +E
Sbjct: 288 EELLELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLE 347
Query: 599 ANDKEL-----------QRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQ 647
++ L ++L L L E+L L + ++ L + + E+L+ E++
Sbjct: 348 ELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIE 407
Query: 648 ELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECV 707
L + E L ++ L +EL++ E +E + L + L+ + Q+ L+ + +E
Sbjct: 408 SLEERLERLSERLEDLKEELKELEAELEELQTELEELNEELEE-LEEQLEELRDRLKE-- 464
Query: 708 TKLTEEKINLKKQNEECVTKLTEEKEQVRAALE--KKLHATVKQITEEKDCELSRLQANL 765
E ++ ++ + + K E LE ++ V+ + E + L + +
Sbjct: 465 ---LERELAELQEELQRLEKELSSLEARLDRLEAEQRASQGVRAVLEALESGLPGVYGPV 521
Query: 766 CQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCT---L 822
+L K+ +++E AL A G++ QA+++ + + + + + LKE + + T L
Sbjct: 522 AEL----IKVKEKYETALEAALGNRLQAVVV---ENEEVAKKAIEFLKENKAGRATFLPL 574
Query: 823 DRIKRESAGRSEQDRNTINTLRE-------------QLNRTVAKLEELKTRTEEEKAILE 869
DRIK + +S+ + + + +++L+
Sbjct: 575 DRIKPLRSLKSDAAPGFLGLASDLIDFDPKYEPAVRFVLGDTLVVDDLEQ---------A 625
Query: 870 RKISDLKSEREALVT--------------------ESEELKVQLHLSEDKVDTVQAQLLE 909
R+++ + +VT S K +L E+++ ++AQL +
Sbjct: 626 RRLARKLRIKYRIVTLDGDLVEPSGSITGGSRNKRSSLAQKRELKELEEELAELEAQLEK 685
Query: 910 TARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQART 969
LK +N SL L + + L + + ++ + L E +++++S +
Sbjct: 686 LEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEE 745
Query: 970 IDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCK 1029
++E +++ + + L +L +A LK+E+ + E+ R L E L+E+ +
Sbjct: 746 LEELEEELEEL--QERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELE 803
Query: 1030 FLEIEKEKYNFVISYLLC-LFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQ 1088
E + + L ++E E+ ++ ++ +L +L L+ + E + ++L LK+
Sbjct: 804 EAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKE 863
Query: 1089 KYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKD 1148
+ E+ + L++L +E EE E L +L + L +E + L +LEA +
Sbjct: 864 ELEELEAEKEELEDELKELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLER 923
Query: 1149 VEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKS--MDCHTDRSSDLER 1206
+E +L + L + +E E E+ R+ + +A + + ER
Sbjct: 924 LEVELPELEEEL-----EEEYEDTLETELEREIERLEEEIEALGPVNLRAIEEYEEVEER 978
Query: 1207 YRAAQLHAESLLEAREK 1223
Y + E L EA+EK
Sbjct: 979 YEELKSQREDLEEAKEK 995
Score = 77.1 bits (190), Expect = 6e-14
Identities = 79/339 (23%), Positives = 166/339 (48%), Gaps = 10/339 (2%)
Query: 425 LTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKN 484
L +L + +AQL ++ E ++L + L L + E+ +E L L +++
Sbjct: 672 LEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEE 731
Query: 485 NSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA 544
+L E L+ E L+ EL+ + ++ E EL E+ +L+E++ E +
Sbjct: 732 LEQLQSRLEELEEELEELEEELEELQERLEELEEELESLEEALAKLKEEIEELEEKRQAL 791
Query: 545 KLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKEL 604
+ E LE+ EE + L +E+ +E ERL + ++ E+I + E ++ ++EL
Sbjct: 792 QEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEEL 851
Query: 605 QRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLN 664
+ L+++L L+ + E LEA + + L++ + +KE+LE E++EL + LK ++ +L
Sbjct: 852 EELEKELEELKEELEELEAEKEELEDELKELEEEKEELEEELRELESELAELKEEIEKLR 911
Query: 665 KELEDTEKRAQETKASLVQQASGL--------DADYQNQISNLKKQNEECVTKLTEEKIN 716
+ LE+ E + + + L + L + + + +I L+++ E + I
Sbjct: 912 ERLEELEAKLERLEVELPELEEELEEEYEDTLETELEREIERLEEEIEALGP-VNLRAIE 970
Query: 717 LKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKD 755
++ EE +L ++E + A +KL ++++ +EK
Sbjct: 971 EYEEVEERYEELKSQREDLEEAK-EKLLEVIEELDKEKR 1008
Score = 76.3 bits (188), Expect = 1e-13
Identities = 170/883 (19%), Positives = 360/883 (40%), Gaps = 75/883 (8%)
Query: 457 KSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINE---------SLQSEKLFLQN--- 504
K E+ +R++ E+L D +++ +L K+ L++E L+
Sbjct: 171 KERKEEAERKLERTEENLERLEDLLEELEKQLEKLERQAEKAERYQELKAELRELELALL 230
Query: 505 --ELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLL 562
+L + +++ E EL E+ L+E+L A ++++ K E L + EE+Q L
Sbjct: 231 LAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEEL 290
Query: 563 AHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLE 622
+++ ++E E+ L ++ ++ + E +E ++++ L+E+L + E LE
Sbjct: 291 LELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELE 350
Query: 623 AILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLV 682
+L + + E+ + K L E++EL E+L+ ++ L EL + +E K +
Sbjct: 351 QLLAELEEAKEELEEKLSALLEELEELF---EALREELAELEAELAEIRNELEELKREI- 406
Query: 683 QQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKK 742
+ ++ +LK++ +E +L E + L++ NEE + +L E+ E++R L++
Sbjct: 407 ESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEE-LEELEEQLEELRDRLKE- 464
Query: 743 LHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQK 802
+++ E EL RL+ L L++ +D++ +A RA + L +
Sbjct: 465 ----LERELAELQEELQRLEKELSSLEARLDRL-----EAEQRASQGVRAVLEALESGLP 515
Query: 803 AIQDRLSQVLKELEEEKCTLDRIKRESAG----RSEQD-RNTINTLREQLNR--TVAKLE 855
+ +++++K E+ + L+ +E+ + I L+E T L+
Sbjct: 516 GVYGPVAELIKVKEKYETALEAALGNRLQAVVVENEEVAKKAIEFLKENKAGRATFLPLD 575
Query: 856 ELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLK 915
+K + + + E V+ L DT+ LE ARRL
Sbjct: 576 RIKPLRSLKSDAAPGFLGLASDLIDFD--PKYEPAVRFVLG----DTLVVDDLEQARRLA 629
Query: 916 EAENVGE---SLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDE 972
+ +L DL++ + + K ++L+E+ +++ + + +E
Sbjct: 630 RKLRIKYRIVTLDGDLVEPSGSITGGSRNKRSSLAQKRELKELEEELAELEAQLEKLEEE 689
Query: 973 GLQ-KIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFL 1031
K +R +D + LR QL + + LK+EL E+ L S L+E+ + L
Sbjct: 690 LKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEELEEL 749
Query: 1032 EIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYE 1091
E E E+ + ++E EL + + + L ++ L+ K++ + E+L L+++ E
Sbjct: 750 EEELEELQERLE------ELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELE 803
Query: 1092 QSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEH 1151
++ + + + LE L + E E + +L + EE++ L +LE ++++
Sbjct: 804 EAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKE 863
Query: 1152 KLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSDLERYRAAQ 1211
+L + + + L E E E + + + S+L +
Sbjct: 864 ELEELEAEKEELEDE-------LKELEEEKEELEEELRELE---------SELAELKEEI 907
Query: 1212 LHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGGEGGEGLIDVDP 1271
LE E + L + R E E L V+
Sbjct: 908 EKLRERLEELEAKLERLEVELPELEE-ELEEEYEDTLETELEREIERLEEEIEALGPVNL 966
Query: 1272 EI------VRKGVRNLMQQVAQIERERDDLKAMTQALKREIKD 1308
V + L Q +E ++ L + + L +E ++
Sbjct: 967 RAIEEYEEVEERYEELKSQREDLEEAKEKLLEVIEELDKEKRE 1009
Score = 71.3 bits (175), Expect = 4e-12
Identities = 72/301 (23%), Positives = 151/301 (50%), Gaps = 8/301 (2%)
Query: 389 RKETKLATHREQLHTMKKQYESADE----SQYNMSQQVTSLTSQLDQTKAQLAQVGREKE 444
R E L +QL +++Q E A+ ++ L ++L + + +L ++ E
Sbjct: 190 RLEDLLEELEKQLEKLERQAEKAERYQELKAELRELELALLLAKLKELRKELEELEEELS 249
Query: 445 ALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQN 504
L + +E L+ E EK E+ +E L L+++Q+ L + E L+ E L+
Sbjct: 250 RLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLELKEEIEELEGEISLLRE 309
Query: 505 ELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAH 564
L+ + ++++ E L ++ L+E+L L+ + LE+ KEE++ L+
Sbjct: 310 RLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSA 369
Query: 565 ----IEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKES 620
+E+ + E+ L + +++ ++ + + IE+ ++ L+RL E+L L+ + +
Sbjct: 370 LLEELEELFEALREELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKE 429
Query: 621 LEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKAS 680
LEA L + Q+ LE+ + + E+LE +++EL + + L+ ++ L +EL+ EK +A
Sbjct: 430 LEAELEELQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEAR 489
Query: 681 L 681
L
Sbjct: 490 L 490
Score = 68.2 bits (167), Expect = 3e-11
Identities = 91/377 (24%), Positives = 168/377 (44%), Gaps = 25/377 (6%)
Query: 597 IEANDKELQRLQEQLA---SLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQ 653
I A +E ++L E+ A + KE E L T+ +LE+ + E+LE ++
Sbjct: 150 INAKPEERRKLIEEAAGVSKYKERKEEAERKLERTEENLERLEDLLEELEKQL------- 202
Query: 654 ESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEE 713
E L+ Q + +R QE KA L + L ++ ++ EE +++L EE
Sbjct: 203 EKLERQA--------EKAERYQELKAELRELELALLLAKLKELRKELEELEEELSRLEEE 254
Query: 714 KINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHID 773
L+++ EE ++ EE + L ++L +++ E K+ E+ L+ + L+ ++
Sbjct: 255 LEELQEELEEAEKEI-EELKSELEELREELEELQEELLELKE-EIEELEGEISLLRERLE 312
Query: 774 KICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRS 833
++ + E+ R E K++ + K + +L+ELE+ L+ K E +
Sbjct: 313 ELENELEELEERLEELKEKI-----EALKEELEERETLLEELEQLLAELEEAKEELEEKL 367
Query: 834 EQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQL 893
+ L E L +A+LE E L+R+I L+ E L E+LK +L
Sbjct: 368 SALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEEL 427
Query: 894 HLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLR 953
E +++ +Q +L E L+E E E LR L + + LA+ E + K L
Sbjct: 428 KELEAELEELQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLE 487
Query: 954 EMVKKVESEKRDQARTI 970
+ ++E+E+R
Sbjct: 488 ARLDRLEAEQRASQGVR 504
Score = 66.3 bits (162), Expect = 1e-10
Identities = 62/312 (19%), Positives = 136/312 (43%), Gaps = 23/312 (7%)
Query: 391 ETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNI 450
+ +L + + L +++Q E + + +++ +L +L+Q +++L ++ E E L + +
Sbjct: 694 KNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEELEELEEEL 753
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRIN 510
E L+ LE+ + E + L ++++++ L + E L+ E + LD +
Sbjct: 754 EELQERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALE 813
Query: 511 SDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG 570
++++ E E L E++ E L + E LE+ EE++ L +E K
Sbjct: 814 RELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKE 873
Query: 571 DVEAEMERLLLDRSDMNEQ--------------ISKYEITIEANDKELQRLQEQLASLRS 616
++E E++ L ++ ++ E+ I K +E + +L+RL+ +L L
Sbjct: 874 ELEDELKELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEE 933
Query: 617 DKESLEAILFDTQSHLEQSDVKKEQLE---------HEVQELLVKQESLKGQVVRLNKEL 667
+ E +T+ E +++E E +E+ + E LK Q L +
Sbjct: 934 ELEEEYEDTLETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEELKSQREDLEEAK 993
Query: 668 EDTEKRAQETKA 679
E + +E
Sbjct: 994 EKLLEVIEELDK 1005
Score = 63.6 bits (155), Expect = 8e-10
Identities = 87/348 (25%), Positives = 156/348 (44%), Gaps = 24/348 (6%)
Query: 590 ISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLE-QSDVKKEQLEHEVQE 648
+SKY+ E +++L+R +E L L E LE L LE Q++ + E + +
Sbjct: 167 VSKYKERKEEAERKLERTEENLERLEDLLEELEKQL----EKLERQAEKAERYQELKAEL 222
Query: 649 LLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVT 708
++ L ++ L KELE+ E+ + L + Q ++ +K+ EE +
Sbjct: 223 RELELALLLAKLKELRKELEELEEELSRLEEEL--------EELQEELEEAEKEIEELKS 274
Query: 709 KLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQL 768
+L E + L++ EE + +L EE E++ + +++ EE + EL L+ L +L
Sbjct: 275 ELEELREELEELQEE-LLELKEEIEELEGEISL-----LRERLEELENELEELEERLEEL 328
Query: 769 QSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRE 828
+ I+ L + L + + ++ L + L L EE L RE
Sbjct: 329 KEKIEA-----LKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALRE 383
Query: 829 SAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE 888
E + I E+L R + LEE R E L+ ++ +L++E E L TE EE
Sbjct: 384 ELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEE 443
Query: 889 LKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLA 936
L +L E++++ ++ +L E R L E + + L K+L + L
Sbjct: 444 LNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLD 491
Score = 62.4 bits (152), Expect = 2e-09
Identities = 84/376 (22%), Positives = 162/376 (43%), Gaps = 41/376 (10%)
Query: 596 TIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQES 655
+ A +EL+ L+E+LA L + E LE L ++ L + E+L +++EL + E
Sbjct: 661 SSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEE 720
Query: 656 LKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKI 715
LK ++ L +ELE + R +E + L ++ + Q ++ L+++ E L E
Sbjct: 721 LKRELAALEEELEQLQSRLEELEEEL-EELEEELEELQERLEELEEELES----LEEALA 775
Query: 716 NLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKI 775
LK++ EE + + + ++ LE++L ++ + + EL L+ +L+ I+++
Sbjct: 776 KLKEEIEE-LEEKRQALQEELEELEEELE-EAERRLDALERELESLEQRRERLEQEIEEL 833
Query: 776 ----------CQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRI 825
+ E+ L E + ++ ++ + + L LKELEEEK L+
Sbjct: 834 EEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKE-ELEDELKELEEEKEELEEE 892
Query: 826 KRESAGRSEQDRNTINTLREQLNRTVAKLEELKTR-------------------TEEEKA 866
RE + + I LRE+L AKLE L+ E E
Sbjct: 893 LRELESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYEDTLETELEREIE 952
Query: 867 ILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRK 926
LE +I L + E EE++ + +++ + + L E +L E + ++
Sbjct: 953 RLEEEIEALGPVNLRAIEEYEEVEERY----EELKSQREDLEEAKEKLLEVIEELDKEKR 1008
Query: 927 DLLDTKTHLADSNFEK 942
+ + NF +
Sbjct: 1009 ERFKETFDKINENFSE 1024
Score = 57.0 bits (138), Expect = 1e-07
Identities = 68/375 (18%), Positives = 157/375 (41%), Gaps = 20/375 (5%)
Query: 252 SGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELL 311
SG+ G S A E +L +E +EL++Q+ L+ E ++ NE + E+ +EEL
Sbjct: 649 SGSITGGSRNKRSSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELR 708
Query: 312 KRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRH 371
+++ LE ++EE + + +EE ++L+ L + + ++ E +
Sbjct: 709 RQLEELERQLEELKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELE 768
Query: 372 ATFSARPS--TSIKPSVTFRKET--KLATHREQLHTMKKQYESADESQYNMSQQVTSLTS 427
+ A I+ R+ +L E+L +++ ++ + ++ Q+ L
Sbjct: 769 SLEEALAKLKEEIEELEEKRQALQEELEELEEELEEAERRLDALERELESLEQRRERLEQ 828
Query: 428 QLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSR 487
++++ + ++ ++ + + L + +E L E L++ E+ E L L ++++
Sbjct: 829 EIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEE---E 885
Query: 488 LSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA--K 545
++ E L+ L++EL + +++ L E RL +L E+L+
Sbjct: 886 KEELEEELRE----LESELAELKEEIEKLRERLEELEAKLERLEVELPELEEELEEEYED 941
Query: 546 LAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQ 605
+ LE+ E ++ + + E E + ++ Q E + +
Sbjct: 942 TLETELEREIERLEEEIEALGPVNLRAIEEYEEVEERYEELKSQREDLE-------EAKE 994
Query: 606 RLQEQLASLRSDKES 620
+L E + L +K
Sbjct: 995 KLLEVIEELDKEKRE 1009
Score = 56.6 bits (137), Expect = 1e-07
Identities = 67/341 (19%), Positives = 137/341 (40%), Gaps = 39/341 (11%)
Query: 270 AEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVL 329
E L+ + EL+ ++ L+ E + + E ++ +E +EE K I L++ +EE + +
Sbjct: 225 LELALLLAKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELE 284
Query: 330 LVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFR 389
++E EL+ L + + E +
Sbjct: 285 ELQEELLELKEEIEELEGEISLLRERLEELE----------------------------N 316
Query: 390 KETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQ-VGREKEALVK 448
+ +L E+L + + E + + +++ L ++L++ K +L + + E L +
Sbjct: 317 ELEELEERLEELKEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEE 376
Query: 449 NIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDR 508
E LR E + LE EI +E L ++ +++ RLS+ E L+ E L+ EL+
Sbjct: 377 LFEALREELAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEE 436
Query: 509 INSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKS 568
+ ++++ EL E+ LR+ L +L + + LE+ ++ L +E
Sbjct: 437 LQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLDRLEAE 496
Query: 569 KGDVEAEMERLLLDRSDMNEQI----------SKYEITIEA 599
+ + L S + KYE +EA
Sbjct: 497 QRASQGVRAVLEALESGLPGVYGPVAELIKVKEKYETALEA 537
Score = 53.6 bits (129), Expect = 1e-06
Identities = 71/295 (24%), Positives = 134/295 (45%), Gaps = 34/295 (11%)
Query: 1396 SGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEH 1455
S E + L++EL+ EA++ KLE + +L+ + + L+ LL+E L +L+ + E
Sbjct: 661 SSLAQKRELKELEEELAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEE 720
Query: 1456 QCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEK 1515
R + LEE L++ +++L LE EL+ ++ L+ L E
Sbjct: 721 LKRELAALEEELEQLQSRLEELEEELEELEEELEELQERLEELEEELESLE-------EA 773
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDL 1575
L +L++ + E +++ LQE L+ + L E R+ AL+RE++ L
Sbjct: 774 LAKLKEEIEELEEKRQALQEELEELEEELEEAERRL--------------DALERELESL 819
Query: 1576 SDAHTQESNKMAQAQQTMRALQEEKYALETKLSQ-TKAAANSQNELEVKEVARAGLESQL 1634
+ ++ + ++ + L+E+ LE +L + K + ELE E + LE +L
Sbjct: 820 EQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKEELEELEAEKEELEDEL 879
Query: 1635 RMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQ 1689
EE +L E EL ++L L ++I+ LR++L + +
Sbjct: 880 ------------KELEEEKEELEEELRELESELAELKEEIEKLRERLEELEAKLE 922
Score = 52.4 bits (126), Expect = 2e-06
Identities = 54/259 (20%), Positives = 100/259 (38%), Gaps = 27/259 (10%)
Query: 1460 ITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQL 1519
+ LE + L+ + L L ELR +++ L+R L + + E+L+QL
Sbjct: 676 LAELEAQLEKLEEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQL 735
Query: 1520 QKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAH 1579
Q L E E L+E L+ Q L EL E + L+ LK EI++L +
Sbjct: 736 QSRLEELEEELEELEEELEELQERLEELE-------EELESLEEALAKLKEEIEELEEKR 788
Query: 1580 TQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANS-QNELEVKEVARAGLESQLRMSQ 1638
++ + ++ + + ALE +L + + E+E E LE
Sbjct: 789 QALQEELEELEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELE------- 841
Query: 1639 WPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLYIYRDTRA 1698
E++ +L E EL +LE L ++++ L + +
Sbjct: 842 ------------EKLDELEEELEELEKELEELKEELEELEAEKEELEDELKELEEEKEEL 889
Query: 1699 GKEMQQLRQALGDSLRTVA 1717
+E+++L L + +
Sbjct: 890 EEELRELESELAELKEEIE 908
Score = 50.9 bits (122), Expect = 6e-06
Identities = 74/371 (19%), Positives = 162/371 (43%), Gaps = 30/371 (8%)
Query: 660 VVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKK 719
V + + E+ E++ + T+ +L ++ +L ++ E+ + KL + +
Sbjct: 167 VSKYKERKEEAERKLERTEENL------------ERLEDLLEELEKQLEKLERQA----E 210
Query: 720 QNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQH 779
+ E E +E A L KL K++ E ++ ELSRL+ L +LQ +++ ++
Sbjct: 211 KAERYQELKAELRELELALLLAKLKELRKELEELEE-ELSRLEEELEELQEELEEAEKEI 269
Query: 780 EDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKR---ESAGRSEQD 836
E L + ++ L Q++ +++ + ++ E+ + L+ ++ E R E+
Sbjct: 270 E-ELKSELEELREELEELQEELLELKEEIEELEGEISLLRERLEELENELEELEERLEEL 328
Query: 837 RNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLS 896
+ I L+E+L LEEL+ E + E L + E L E L+ +L
Sbjct: 329 KEKIEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAEL 388
Query: 897 EDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMV 956
E ++ ++ +L E R ++ E E L + L D K L + E ++ ++L E +
Sbjct: 389 EAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEEL 448
Query: 957 KKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLD 1016
+++E + + + E +++ L+ +L +++SL+ L + E +
Sbjct: 449 EELEEQLEELRDRLKELEREL---------AELQEELQRLEKELSSLEARLDRLEAEQRA 499
Query: 1017 LDSEKVTLQEK 1027
+ L+
Sbjct: 500 SQGVRAVLEAL 510
Score = 47.0 bits (112), Expect = 9e-05
Identities = 65/341 (19%), Positives = 139/341 (40%), Gaps = 15/341 (4%)
Query: 1373 ELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQ 1432
E L E + +D L + + +L+ + + EL+ L
Sbjct: 178 ERKLERTEENLERLEDLLEELEKQLEKLERQAEKAERYQELKAEL---RELELALLLAKL 234
Query: 1433 QRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELR 1492
+ L+ L+E E L +L+E E + E+ LK+ +++L LE EL+
Sbjct: 235 KELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQEELLELK 294
Query: 1493 GEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQV 1552
EI+ L+ + + +L++L++ L + + L+E L+ + L EL +
Sbjct: 295 EEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLLEELEQLLA 354
Query: 1553 NRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKA 1612
E +++L+ + L +++L + ++A+ + + ++ E L+ ++ +
Sbjct: 355 ELEEAKEELE---EKLSALLEELEELFEALREELAELEAELAEIRNELEELKREIESLEE 411
Query: 1613 AANS-QNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLH 1671
LE + LE++L Q +EE+ +L + ELR++L+ L
Sbjct: 412 RLERLSERLEDLKEELKELEAELEELQ-----TELEELNEELEELEEQLEELRDRLKELE 466
Query: 1672 ---DKIQMLRDQLNSEIKRRQLYIYRDTRAGKEMQQLRQAL 1709
++Q +L E+ + + R + Q +R L
Sbjct: 467 RELAELQEELQRLEKELSSLEARLDRLEAEQRASQGVRAVL 507
Score = 46.6 bits (111), Expect = 1e-04
Identities = 63/336 (18%), Positives = 129/336 (38%), Gaps = 45/336 (13%)
Query: 190 KEKDWIEEEQYFNDYYSSEHARLLALWRDVVDIKRSFTAMQSA---TEQDLSKIRSDLNQ 246
E +E L L ++ ++ +Q E+++ +++S+L +
Sbjct: 220 AELRELELALLLAKLKELRK-ELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEE 278
Query: 247 STRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEER 306
++ L E ++L E S L+ ++ L++E + ++ +E+
Sbjct: 279 LREELE-------ELQEELLELKEEIEELEGEISLLRERLEELENELEELEERLEELKEK 331
Query: 307 VEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPA 366
+E L + + E +EE +Q + +EE ++ELE + L + + + +
Sbjct: 332 IEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELA----- 386
Query: 367 PLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLT 426
E +LA R +L +K++ ES +E L+
Sbjct: 387 ----------------------ELEAELAEIRNELEELKREIESLEERL-------ERLS 417
Query: 427 SQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNS 486
+L+ K +L ++ E E L +E L E LE+ E+ + ++ L L ++Q+
Sbjct: 418 ERLEDLKEELKELEAELEELQTELEELNEELEELEEQLEELRDRLKELERELAELQEELQ 477
Query: 487 RLSKINESLQSEKLFLQNELDRINSDMDAREVELRG 522
RL K SL++ L+ E E G
Sbjct: 478 RLEKELSSLEARLDRLEAEQRASQGVRAVLEALESG 513
Score = 44.3 bits (105), Expect = 7e-04
Identities = 50/253 (19%), Positives = 109/253 (43%), Gaps = 11/253 (4%)
Query: 1439 LQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQ----LNLTLERASAGETELRGE 1494
+E E L + +E E + LE++ L+ ++ L E L +
Sbjct: 174 KEEAERKLERTEENLERLEDLLEELEKQLEKLERQAEKAERYQELKAELRELELALLLAK 233
Query: 1495 IQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNR 1554
++ L++ L + E+L +L++ L + E ++ ++ ++ L ELR +
Sbjct: 234 LKELRKEL-------EELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEEL 286
Query: 1555 LENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAA 1614
E +LK + L+ EI L + + N++ + ++ + L+E+ AL+ +L + +
Sbjct: 287 QEELLELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEELEERETLL 346
Query: 1615 NSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKI 1674
+L + + + + EE+ +L E +E+RN+LE L +I
Sbjct: 347 EELEQLLAELEEAKEELEEKLSALLEELEELFEALREELAELEAELAEIRNELEELKREI 406
Query: 1675 QMLRDQLNSEIKR 1687
+ L ++L +R
Sbjct: 407 ESLEERLERLSER 419
Score = 43.5 bits (103), Expect = 0.001
Identities = 68/364 (18%), Positives = 148/364 (40%), Gaps = 28/364 (7%)
Query: 1074 RKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVR 1133
+KE L R ++ E+ ++ + K LE L ++ E+ E +L A L E +
Sbjct: 172 ERKEEAERKLERTEENLERLEDLLEELEKQLEKLERQAEKAER-YQELKAELRELELALL 230
Query: 1134 ASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKS 1193
A L +L +++E +LS + L + A + E ++EL +R + + +
Sbjct: 231 L--AKLKELRKELEELEEELSRLEEELEELQEELEEAEKEIEELKSELEELREELEELQE 288
Query: 1194 MDCH-TDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSR 1252
+ +LE + LE + +++ L+ +++
Sbjct: 289 ELLELKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIEALKEE---------- 338
Query: 1253 RYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDA 1312
++ ++ + + L + E + L A+ + L+ + L +
Sbjct: 339 --------------LEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREE 384
Query: 1313 HTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTL 1372
+ ++A+ + + L+ E +LE +L + E + + EL+ L+ ++ L
Sbjct: 385 LAELEAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEEL 444
Query: 1373 ELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQ 1432
L + E+ + D+L + A L E + L+ ELS EAR+ +LE ++ A +G +
Sbjct: 445 NEELEELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLDRLEAEQRASQGVR 504
Query: 1433 QRLQ 1436
L+
Sbjct: 505 AVLE 508
Score = 37.4 bits (87), Expect = 0.077
Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 9/221 (4%)
Query: 125 EERIQDLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLR 184
EE ++ L LR L+D E + + E+L AL +LE+L + L
Sbjct: 687 EEELKSLKNELRSLEDLLEELRRQLEELERQLEELKREL---AALEEELEQLQSRLEELE 743
Query: 185 EEMAMKEKDWIEEEQYFN------DYYSSEHARLLALWRDVVDIKRSFTAMQSATEQDLS 238
EE+ E++ E ++ + A+L ++ + +++ E++L
Sbjct: 744 EELEELEEELEELQERLEELEEELESLEEALAKLKEEIEELEEKRQALQEELEELEEELE 803
Query: 239 KIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMAN 298
+ L+ R++ L E ++L ++ EL+ ++ L+ E +
Sbjct: 804 EAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELEKELEELKE 863
Query: 299 ESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELE 339
E ++ E EEL + LE EE ++ + +E EL+
Sbjct: 864 ELEELEAEKEELEDELKELEEEKEELEEELRELESELAELK 904
Score = 36.2 bits (84), Expect = 0.19
Identities = 45/246 (18%), Positives = 94/246 (38%), Gaps = 16/246 (6%)
Query: 120 LREMREERIQDLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLT-- 177
L+ EE ++L L + + E E+L S+ +E+L+E + E L LE+L
Sbjct: 272 LKSELEELREELEELQEELLELKEEIEELEGEISLLRERLEELENELEELEERLEELKEK 331
Query: 178 --------TDWTHLREEMAMKEKDW---IEEEQYFNDYYSSEHARLLALWRDVVDIKRSF 226
+ L EE+ + EE + E L R+ +
Sbjct: 332 IEALKEELEERETLLEELEQLLAELEEAKEELEEKLSALLEELEELFEALREELA---EL 388
Query: 227 TAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQV 286
A + +L +++ ++ ++ L L AE ++L E EL ++
Sbjct: 389 EAELAEIRNELEELKREIESLEERLERLSERLEDLKEELKELEAELEELQTELEELNEEL 448
Query: 287 TVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLR 346
L+ + + + K+ E + EL + + LE + + + +E Q+ + ++ L
Sbjct: 449 EELEEQLEELRDRLKELERELAELQEELQRLEKELSSLEARLDRLEAEQRASQGVRAVLE 508
Query: 347 DIARAV 352
+ +
Sbjct: 509 ALESGL 514
Score = 35.5 bits (82), Expect = 0.31
Identities = 57/325 (17%), Positives = 126/325 (38%), Gaps = 24/325 (7%)
Query: 33 SHLLRQNSDLQRKLDEESVINRKKLEAYRTSQQQQAALVSKLQAKLLQYKQRCKELELER 92
L+ + R L++ R++LE ++ ++ L+ +L Q + R +ELE E
Sbjct: 687 EEELKSLKNELRSLEDLLEELRRQLEELERQLEELKRELAALEEELEQLQSRLEELEEEL 746
Query: 93 EAPSTSSYLGPLPSTPLPSALDAAQAHLREMREERIQDLNTALRRLDDERRENEKLRKMN 152
E L L+ + L + EE + L + L+++R+ ++ +
Sbjct: 747 EELEEE-------LEELQERLEELEEELESL-EEALAKLKEEIEELEEKRQALQEELEE- 797
Query: 153 SVYKEQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKE---KDWIEEEQYFNDYYSSEH 209
+E+L+EA +AL +LE L L +E+ E ++ E+ +
Sbjct: 798 --LEEELEEAERRLDALERELESLEQRRERLEQEIEELEEEIEELEEKLDELEEELEELE 855
Query: 210 ARLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATN 269
L L ++ +++ + E +L ++ + + ++ + L L
Sbjct: 856 KELEELKEELEELEAEKEEL----EDELKELEEEKEELEEELRELESELAELKEEIEKLR 911
Query: 270 AEKDKLVKENSELKSQVTVLKSENNA--MANESKQKEERVEELLKRIHTLE----ARVEE 323
++L + L+ ++ L+ E + E +E L + I L +EE
Sbjct: 912 ERLEELEAKLERLEVELPELEEELEEEYEDTLETELEREIERLEEEIEALGPVNLRAIEE 971
Query: 324 ADQNVLLVEEMQQELELLQNTLRDI 348
++ EE++ + E L+ +
Sbjct: 972 YEEVEERYEELKSQREDLEEAKEKL 996
Score = 33.5 bits (77), Expect = 1.4
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 17/178 (9%)
Query: 1517 KQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLS 1576
+ ++ AE + +E L+ + L EL + Q+ +LE Q + Q LK E+++L
Sbjct: 168 SKYKERKEEAERKLERTEENLERLEDLLEELEK-QLEKLERQAEKAERYQELKAELRELE 226
Query: 1577 DA-----HTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLE 1631
A + ++ + ++ + L+EE L+ +L + + + E++E+ E
Sbjct: 227 LALLLAKLKELRKELEELEEELSRLEEELEELQEELEE-AEKEIEELKSELEELREELEE 285
Query: 1632 SQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQ 1689
Q + + EEI +L E S LR +LE L ++++ L ++L ++ +
Sbjct: 286 LQEELLE----------LKEEIEELEGEISLLRERLEELENELEELEERLEELKEKIE 333
>gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily
archaeal type. SMC (structural maintenance of
chromosomes) proteins bind DNA and act in organizing and
segregating chromosomes for partition. SMC proteins are
found in bacteria, archaea, and eukaryotes. It is found
in a single copy and is homodimeric in prokaryotes, but
six paralogs (excluded from this family) are found in
eukarotes, where SMC proteins are heterodimeric. This
family represents the SMC protein of archaea and a few
bacteria (Aquifex, Synechocystis, etc); the SMC of other
bacteria is described by TIGR02168. The N- and C-terminal
domains of this protein are well conserved, but the
central hinge region is skewed in composition and highly
divergent [Cellular processes, Cell division, DNA
metabolism, Chromosome-associated proteins].
Length = 1164
Score = 62.4 bits (152), Expect = 2e-09
Identities = 62/376 (16%), Positives = 154/376 (40%), Gaps = 36/376 (9%)
Query: 520 LRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERL 579
RG +R +L E L+ K L+ ++ L + + D ++ +
Sbjct: 662 PRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEI 721
Query: 580 LLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQ----- 634
+ + ++ K + +E +++L L++++ +++S+ + LEA + + + L +
Sbjct: 722 EKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL 781
Query: 635 SDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQN 694
+D++ + E+ + L+ +V R+ L + E++ +
Sbjct: 782 NDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN-------------RLTLEK 828
Query: 695 QISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEK 754
+ + Q + +E+I ++ E + EE E+ LE L ++ + K
Sbjct: 829 EYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLK 888
Query: 755 DCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKE 814
E L+A L +L+ I+++ Q E R + +A L A +++ + + +E
Sbjct: 889 K-ERDELEAQLRELERKIEELEAQIEKKRKRLS--ELKAKLEALEEELSEIEDPKGEDEE 945
Query: 815 LEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISD 874
+ EE+ +L+ ++ E +++ + LE + +E + +++ +
Sbjct: 946 IPEEELSLEDVQAE---------------LQRVEEEIRALEPVNMLAIQEYEEVLKRLDE 990
Query: 875 LKSEREALVTESEELK 890
LK +R L E + +
Sbjct: 991 LKEKRAKLEEERKAIL 1006
Score = 60.9 bits (148), Expect = 6e-09
Identities = 74/377 (19%), Positives = 157/377 (41%), Gaps = 27/377 (7%)
Query: 536 IANEDLKNAKLAKEL--LEQNKEEMQTLLAHIEKSKGDVEAEMERLL--LDRSDMNEQIS 591
+A D K K +EL +E+N E + ++ + + E E+ +
Sbjct: 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYE 224
Query: 592 KYEI--TIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQEL 649
YE+ EA +++ + ++ QLASL + E L + + + LE+ + E+L ++++L
Sbjct: 225 GYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDL 284
Query: 650 LV-KQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVT 708
+Q +K ++ L E+ E R+ K ++ A A + +I L + EE
Sbjct: 285 GEEEQLRVKEKIGELEAEIASLE-RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELER 343
Query: 709 KLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQL 768
++ EE+ K EE E ++ L +L EE D E + + L
Sbjct: 344 EIEEERKRRDKLTEE-----YAELKEELEDLRAEL--------EEVDKEFAETRDELKDY 390
Query: 769 QSHIDKICQQHEDAL--LRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIK 826
+ ++K+ ++ + L ++ Q L D A + + ELEEEK
Sbjct: 391 REKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEI 450
Query: 827 RESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTES 886
++ + EQ ++ ++L + + + E+E + L+R++++ +++ A
Sbjct: 451 KKQEWKLEQLAADLSKYEQELYDLKEEYDRV----EKELSKLQRELAEAEAQARASEERV 506
Query: 887 EELKVQLHLSEDKVDTV 903
+ + + + V
Sbjct: 507 RGGRAVEEVLKASIQGV 523
Score = 59.3 bits (144), Expect = 2e-08
Identities = 55/299 (18%), Positives = 116/299 (38%), Gaps = 8/299 (2%)
Query: 1276 KGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKY 1335
K L +Q IER+ L+ + L EI +L + + + + ++ L EE+
Sbjct: 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ 289
Query: 1336 -ALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCR 1394
++ K+ + +A S ++ +K EL+ E++ LE + + E + + ++
Sbjct: 290 LRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREI---- 345
Query: 1395 ESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCE 1454
+ L +E + + + L + ++ + + L++ L KL+
Sbjct: 346 ---EEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREIN 402
Query: 1455 HQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCE 1514
R + L+E L + LN + A EL E + + +
Sbjct: 403 ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAA 462
Query: 1515 KLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIK 1573
L + ++ L+ + E +++ L Q LAE Q E +A+ + LK I+
Sbjct: 463 DLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQ 521
Score = 58.9 bits (143), Expect = 3e-08
Identities = 68/323 (21%), Positives = 143/323 (44%), Gaps = 43/323 (13%)
Query: 1288 IERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAA 1347
++RE L++ + ++ + +LS + S K+ + ++ + L++E+ L+ +L + +
Sbjct: 686 LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEED 745
Query: 1348 ANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRAL 1407
+S + ++ EL+ L ++ LE L + E + + +L + AE L
Sbjct: 746 LSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLS--HSRIPEIQAELSKL 803
Query: 1408 QDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERC 1467
++E+SR EAR+ ++E Q+L L EKE L++ + L+E+
Sbjct: 804 EEEVSRIEARLREIE----------QKLNRLTLEKEY----LEKEIQELQEQRIDLKEQI 849
Query: 1468 TSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAE 1527
S++ I+ LN E EL ++ L+ +L L+K E
Sbjct: 850 KSIEKEIENLNGKKEELEEELEELEAALRDLE--------------SRLGDLKKERDELE 895
Query: 1528 NEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMA 1587
+ R L+ +++ +A + + R + +LKA +AL+ E+ ++ D ++
Sbjct: 896 AQLRELERKIEELEAQIEKKR-------KRLSELKAKLEALEEELSEIEDPKGEDEEIPE 948
Query: 1588 ------QAQQTMRALQEEKYALE 1604
Q ++ ++EE ALE
Sbjct: 949 EELSLEDVQAELQRVEEEIRALE 971
Score = 57.0 bits (138), Expect = 8e-08
Identities = 70/358 (19%), Positives = 152/358 (42%), Gaps = 29/358 (8%)
Query: 570 GDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQ------EQLASLRSDKESLEA 623
+ + + E+ L + ++ E I + ++ I+ ++L+RL+ E+ +L +K E
Sbjct: 166 AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEG 225
Query: 624 ILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQ 683
+ E + +KE +E ++ L + E L ++ L K LE+ E+ +E +
Sbjct: 226 YELLKE--KEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKD 283
Query: 684 QASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKL 743
+ +I L+ + + E++ L+ E A LE ++
Sbjct: 284 LGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEER------------LAKLEAEI 331
Query: 744 HATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKA 803
+ +I EE + E+ + +L ++ ++ ED E + + + + K
Sbjct: 332 DKLLAEI-EELEREIEEERKRRDKLTEEYAELKEELEDLRAELE-EVDKEFAETRDELKD 389
Query: 804 IQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEE 863
+++L ++ +E+ E K LDR++ E SE+ + L + AK+ EL+ E+
Sbjct: 390 YREKLEKLKREINELKRELDRLQEELQRLSEELAD----LNAAIAGIEAKINELEEEKED 445
Query: 864 ---EKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAE 918
E E K+ L ++ E +LK + E ++ +Q +L E + + +E
Sbjct: 446 KALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE 503
Score = 57.0 bits (138), Expect = 8e-08
Identities = 55/261 (21%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 442 EKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLF 501
E + L + +E L+ E S+L+ R I ++ L+ L + + K E L+ E+
Sbjct: 675 ELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEK 734
Query: 502 LQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQN------- 554
L+ L+ + D+ + E E+ + + L + EDL + A LE
Sbjct: 735 LKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP 794
Query: 555 -----KEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQE 609
+++ ++ IE ++E ++ RL L++ + ++I + + ++++ +++
Sbjct: 795 EIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEK 854
Query: 610 QLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELED 669
++ +L KE LE L + ++ L + + L+ E EL + L+ ++ L ++E
Sbjct: 855 EIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEK 914
Query: 670 TEKRAQETKASLVQQASGLDA 690
KR E KA L L
Sbjct: 915 KRKRLSELKAKLEALEEELSE 935
Score = 56.6 bits (137), Expect = 1e-07
Identities = 78/381 (20%), Positives = 163/381 (42%), Gaps = 43/381 (11%)
Query: 205 YSSEHARLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAG 264
SE A L L + +KR +++Q +L +I + L++ ++++S A + +
Sbjct: 669 SRSEPAELQRLRERLEGLKRELSSLQ----SELRRIENRLDELSQELSDASRKIGEIEKE 724
Query: 265 SSATNAEKDKLVKENSELKSQVTVL-------KSENNAMANESKQKEERVEELLKRIHTL 317
E++KL + EL+ ++ L KSE + ++ EE + +L + ++ L
Sbjct: 725 IEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL 784
Query: 318 EARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSAR 377
EAR+ + + E+Q EL L+ + I A +++ E K +R K +
Sbjct: 785 EARLSHSR-----IPEIQAELSKLEEEVSRI-EARLREIEQKL--NRLTLEKEYL----- 831
Query: 378 PSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLA 437
E ++ +EQ +K+Q +S ++ N++ + L +L++ +A L
Sbjct: 832 -------------EKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALR 878
Query: 438 QVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLD----KVQKNNSRLSKINE 493
+ L K + L + LE+ E+ +E L K++ LS+I +
Sbjct: 879 DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIED 938
Query: 494 SLQSEKLFLQNELD--RINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELL 551
++ + EL + +++ E E+R E +N ++ + L K + L
Sbjct: 939 PKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKL 998
Query: 552 EQNKEEMQTLLAHIEKSKGDV 572
E+ ++ + + EK K +V
Sbjct: 999 EEERKAILERIEEYEKKKREV 1019
Score = 56.2 bits (136), Expect = 2e-07
Identities = 64/343 (18%), Positives = 139/343 (40%), Gaps = 30/343 (8%)
Query: 834 EQDRNTINTLREQLNRTVAKLEELKT-----RTEEEKAILERKISDLKSEREA--LVTES 886
E+ + + E + R ++E + R E EKA + + K E E L+ E
Sbjct: 173 EKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEK 232
Query: 887 EELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYA 946
E L+ Q E ++ +++ +L + + E E E + + L + + D +++
Sbjct: 233 EALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLG--EEEQL 290
Query: 947 KSNKDLREMVKKVES------EKRDQARTIDEGLQKIAVRFG--DDEKQALRNQLNDQSN 998
+ + + E+ ++ S EK + +E L K+ E + L ++ ++
Sbjct: 291 RVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERK 350
Query: 999 DVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQV 1058
L +E + ++ DL +E L+E K +++ L +L ++
Sbjct: 351 RRDKLTEEYAELKEELEDLRAE---LEEVDKEFAETRDE----------LKDYREKLEKL 397
Query: 1059 TKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVL 1118
++ ++L +L LQ + + + E+LA L N + + ED E +++E L
Sbjct: 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKL 457
Query: 1119 LDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLR 1161
L A L E+ + ++E ++ +L+ + R
Sbjct: 458 EQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQAR 500
Score = 55.1 bits (133), Expect = 3e-07
Identities = 56/298 (18%), Positives = 119/298 (39%), Gaps = 7/298 (2%)
Query: 1376 LSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRL 1435
L + E +L + R++ L ELS ++ ++E + LE ++++L
Sbjct: 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKL 735
Query: 1436 QMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEI 1495
+ L+E E +L L++ E+ + LE R L+ + +L L A I
Sbjct: 736 KERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEA--RLSHSRI 793
Query: 1496 QTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRL 1555
+Q L +L+++++ L+ EK L++ + Q +L+ Q +
Sbjct: 794 PEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIE 853
Query: 1556 ENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAAN 1615
+ ++L + L+ E+++L A +++ ++ L+ + LE K+ + +A
Sbjct: 854 KEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIE 913
Query: 1616 SQNE-LEVKEVARAGLESQL----RMSQWPSESPMNGGDSEEITKLCRERSELRNKLE 1668
+ + L + LE +L E P E++ + E LE
Sbjct: 914 KKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALE 971
Score = 54.7 bits (132), Expect = 4e-07
Identities = 64/366 (17%), Positives = 142/366 (38%), Gaps = 35/366 (9%)
Query: 1074 RKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVR 1133
RKKE +E+L +++ E+ + + + LE L +E E+ E L E
Sbjct: 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAER-YQALLKEKREYEGYEL 228
Query: 1134 ASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYD--AY 1191
LE K+ +E +L+S+ L ++ +SE E L I +
Sbjct: 229 LKE--KEALERQKEAIERQLASLEEELEKLTEE-------ISELEKRLEEIEQLLEELNK 279
Query: 1192 KSMDCHTDRSSDLERYRAAQLHAE-SLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSP 1250
K D + ++ + +L AE + LE +++ E +L
Sbjct: 280 KIKDLGEEEQLRVKE-KIGELEAEIASLERSIAEKERELEDAEERL-------------- 324
Query: 1251 SRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLS 1310
E + + E + + + ++ ++ E +LK + L+ E++++
Sbjct: 325 -------AKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVD 377
Query: 1311 DAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVL 1370
+ +++ ++ + L+ E L+ +L + + SE + N + + K+
Sbjct: 378 KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN 437
Query: 1371 TLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEG 1430
LE + + E + + KL + ++ + E L++E R E ++KL+ + E
Sbjct: 438 ELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEA 497
Query: 1431 DQQRLQ 1436
+ +
Sbjct: 498 QARASE 503
Score = 54.7 bits (132), Expect = 5e-07
Identities = 69/369 (18%), Positives = 144/369 (39%), Gaps = 44/369 (11%)
Query: 1360 EELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVT 1419
EEL+ + E + L+L + +EK Q ++L + RE R A + + E
Sbjct: 177 EELEEVEENIERLDLII----DEKRQQLERLRREREKAERYQALLKEKR------EYEGY 226
Query: 1420 KLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNL 1479
+L ++ ALE ++ ++ L E L KL E I+ LE+R ++ +++LN
Sbjct: 227 ELLKEKEALERQKEAIERQLASLEEELEKLTEE-------ISELEKRLEEIEQLLEELNK 279
Query: 1480 TLERASAGET--------ELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKR 1531
++ E EL EI +L+R++ + + E+L +L+ + E
Sbjct: 280 KIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE 339
Query: 1532 VLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQ 1591
L+ ++ + +L + E +DL+A + + +E + D K+ + ++
Sbjct: 340 ELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKR 399
Query: 1592 TMRALQEEKYALETKLSQTKAA-ANSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDS 1650
+ L+ E L+ +L + A+ + E LE +
Sbjct: 400 EINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA------------ 447
Query: 1651 EEITKLCRERSELRNKLENLHDKIQMLR---DQLNSEIKRRQLYIYRDTRAGKEMQQLRQ 1707
EI K + +L L ++ L+ D++ E+ + Q + A + + +
Sbjct: 448 LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQREL---AEAEAQARASEE 504
Query: 1708 ALGDSLRTV 1716
+
Sbjct: 505 RVRGGRAVE 513
Score = 52.8 bits (127), Expect = 2e-06
Identities = 60/298 (20%), Positives = 137/298 (45%), Gaps = 13/298 (4%)
Query: 845 EQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQ 904
++L + L+ + + E +E ++ +L E + E++ ++ E + + ++
Sbjct: 677 QRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLK 736
Query: 905 AQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVE-SEK 963
+L E L E E+++ +L + + + + + K ++ DL + E
Sbjct: 737 ERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEI 796
Query: 964 RDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVT 1023
+ + ++E + +I R + E+ +LN + + L+KE+ + ++ R+DL + +
Sbjct: 797 QAELSKLEEEVSRIEARLREIEQ-----KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKS 851
Query: 1024 LQEKCKFLEIEKEKYNFVIS-YLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVED 1082
++++ + L +KE+ + L +E L + K+R +L QL L+RK E +
Sbjct: 852 IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQ 911
Query: 1083 LARLKQKYEQ---SVEMNNRVNKNLEDLVKECEE---KEVVLLDLCARLGGAEERVRA 1134
+ + +++ + +E +ED E EE +E+ L D+ A L EE +RA
Sbjct: 912 IEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRA 969
Score = 51.6 bits (124), Expect = 4e-06
Identities = 64/354 (18%), Positives = 142/354 (40%), Gaps = 49/354 (13%)
Query: 1286 AQIERERDDLKAMTQALKR------EIKDLSDAHTQESNKMAQAQQTMRALQE------- 1332
+ E+ ++L+ + + ++R E + + +E K + Q ++ +E
Sbjct: 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELL 229
Query: 1333 -EKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLM 1391
EK ALE + + S E +++ EE+ L +++ +E L ++++
Sbjct: 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK------- 282
Query: 1392 KCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQE 1451
+ E+ +++++ EA + LE E + + + L + E + KL
Sbjct: 283 ------DLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
Query: 1452 RCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQS 1511
I LE + D+L +LR E++ + + +T +
Sbjct: 337 E-------IEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
Query: 1512 NCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELR------RQQVNRLEN-----QDD 1560
EKL++L++ ++ + E LQE L LA+L ++N LE +
Sbjct: 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALE 449
Query: 1561 LKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAA 1614
+K L++ DLS + + ++ +++E L+ +L++ +A A
Sbjct: 450 IKKQEWKLEQLAADLSKYEQELYDL----KEEYDRVEKELSKLQRELAEAEAQA 499
Score = 51.6 bits (124), Expect = 4e-06
Identities = 74/351 (21%), Positives = 148/351 (42%), Gaps = 29/351 (8%)
Query: 427 SQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNS 486
+ ++ +L +V E L I+ R + LE+ +RE + +K +
Sbjct: 170 RKKEKALEELEEVEENIERLDLIIDEKRQQ---LERLRREREKAERYQALLKEKREYEGY 226
Query: 487 RLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKL 546
L K E+L+ +K ++ +L + +++ E+ E + + L N+ +K L
Sbjct: 227 ELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK--DL 284
Query: 547 AKELLEQNKEEMQTLLAHIEKSKGDVEA---EMERLLLDRSDMNEQISKYEITIEANDKE 603
+E + KE++ L A I + + E+E + + +I K IE ++E
Sbjct: 285 GEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELERE 344
Query: 604 LQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRL 663
++ +++ L + L+ L D ++ LE+ D + + E+++ K E LK R
Sbjct: 345 IEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLK----RE 400
Query: 664 NKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEE 723
EL+ R QE Q+ S AD I+ ++ + E + ++ + +KKQ
Sbjct: 401 INELKRELDRLQEEL----QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ--- 453
Query: 724 CVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDK 774
+ EQ+ A L K +Q + E R++ L +LQ + +
Sbjct: 454 -----EWKLEQLAADLSK-----YEQELYDLKEEYDRVEKELSKLQRELAE 494
Score = 51.6 bits (124), Expect = 4e-06
Identities = 59/298 (19%), Positives = 130/298 (43%), Gaps = 29/298 (9%)
Query: 727 KLTEEKEQVRA-ALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLR 785
L +EK + L K+ A +Q E + +L+ L+ L +L I ++ ++ E+
Sbjct: 215 ALLKEKREYEGYELLKEKEALERQK-EAIERQLASLEEELEKLTEEISELEKRLEEIEQL 273
Query: 786 AEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLRE 845
E + ++ + ++ +V +++ E + + ++R A + + E
Sbjct: 274 LEE-------LNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERE--------LE 318
Query: 846 QLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQA 905
+AKLE + E LER+I + + R+ L E ELK +L +++ V
Sbjct: 319 DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
Query: 906 QLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVES---- 961
+ ET LK+ E L++++ + K L E + ++ DL + +E+
Sbjct: 379 EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE 438
Query: 962 ------EKRDQARTIDEGLQKIAVRFGDDEKQ--ALRNQLNDQSNDVASLKKELLQAE 1011
+K + + + L+++A E++ L+ + + +++ L++EL +AE
Sbjct: 439 LEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAE 496
Score = 50.8 bits (122), Expect = 7e-06
Identities = 74/372 (19%), Positives = 165/372 (44%), Gaps = 43/372 (11%)
Query: 752 EEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQV 811
E ELS LQ+ L ++++ +D++ Q+ DA R G+ ++ + +Q+++ +++RL ++
Sbjct: 684 EGLKRELSSLQSELRRIENRLDELSQELSDAS-RKIGEIEKEIEQLEQEEEKLKERLEEL 742
Query: 812 ---LKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLN---------------RTVAK 853
L LE+E + +E R E+ ++ L E LN ++K
Sbjct: 743 EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSK 802
Query: 854 LEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARR 913
LEE +R E +E+K++ L E+E L E +EL+ Q ++++ +++ ++
Sbjct: 803 LEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI------ 856
Query: 914 LKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEG 973
E+L + + L + DL++ ++E++ R+ R I+E
Sbjct: 857 --------ENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEE- 907
Query: 974 LQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEI 1033
+ + L+ +L +++ ++ + E+I + S + +Q + + +E
Sbjct: 908 -LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLE-DVQAELQRVEE 965
Query: 1034 EKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARL-KQKYEQ 1092
E V E +V K +L + + L+ +++ ++E + K+K E
Sbjct: 966 EIRALEPVN------MLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREV 1019
Query: 1093 SVEMNNRVNKNL 1104
+E +N+N
Sbjct: 1020 FMEAFEAINENF 1031
Score = 50.5 bits (121), Expect = 1e-05
Identities = 44/225 (19%), Positives = 98/225 (43%), Gaps = 14/225 (6%)
Query: 398 REQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEK 457
+E++ ++ + S + S +++ +L + +A++ ++ E E L + IE R +
Sbjct: 293 KEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRR 352
Query: 458 SALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDARE 517
L E L L+ ++ + K + E + +L+++ +++ +
Sbjct: 353 DKLT-------EEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK 405
Query: 518 VELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEME 577
EL ++ +RL E+L N + + LE EE + I+K E ++E
Sbjct: 406 RELDRLQEELQRLSEELADLNAAIAGIEAKINELE---EEKEDKALEIKKQ----EWKLE 458
Query: 578 RLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLE 622
+L D S +++ + + +KEL +LQ +LA + + E
Sbjct: 459 QLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASE 503
Score = 43.5 bits (103), Expect = 0.001
Identities = 44/292 (15%), Positives = 117/292 (40%), Gaps = 10/292 (3%)
Query: 950 KDLREMVKKVESEKRDQAR--TIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKEL 1007
+ R+ ++++ E+ R + + ++ EK+AL Q +ASL++EL
Sbjct: 194 DEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEEL 253
Query: 1008 LQAEQIRLDLDSEKVTLQEKCKFL--EIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDL 1065
+ + +L+ +++ + L +I+ + + ++E E++ + + ++
Sbjct: 254 EKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEK 313
Query: 1066 SHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARL 1125
+L + + + ++ +L + E+ K + L +E E + L DL A L
Sbjct: 314 ERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAEL 373
Query: 1126 GGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIR 1185
++ + L + ++ +++ + L R+ L++ A +A I
Sbjct: 374 EEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIE 433
Query: 1186 AQYDAYKSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLD 1237
A+ + + ++ + + E L K + Q++ L+ + D
Sbjct: 434 AKINELE-----EEKEDKALEIKKQEWKLEQLAADLSK-YEQELYDLKEEYD 479
Score = 43.1 bits (102), Expect = 0.002
Identities = 58/335 (17%), Positives = 130/335 (38%), Gaps = 30/335 (8%)
Query: 1124 RLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELAR 1183
G R+ A L +L + ++ +LSS+ S LRRI LS+ ++
Sbjct: 661 APRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGE 720
Query: 1184 IRAQYDAYKSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHA 1243
I + + + + ER + SL + E + + ++ LE +++
Sbjct: 721 IEKEIEQLEQ-----EEEKLKERLEELEEDLSSLEQEIE-NVKSELKELEARIEELEEDL 774
Query: 1244 GGKMTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALK 1303
+ E L D++ + + + +++++E E ++A + ++
Sbjct: 775 ----------------HKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIE 818
Query: 1304 REIKDLSDAHTQESNKMAQAQQTMRALQEEK-------YALETKLSQTKAAANSQSEAMD 1356
+++ L+ ++ + Q+ L+E+ L K + + A+
Sbjct: 819 QKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALR 878
Query: 1357 QKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEA 1416
L L+++ LE L + + + + ++ K R+ + L A+ AL++ELS E
Sbjct: 879 DLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIED 938
Query: 1417 RVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQE 1451
+ E + E + +Q LQ E + L+
Sbjct: 939 PKGEDE-EIPEEELSLEDVQAELQRVEEEIRALEP 972
Score = 42.4 bits (100), Expect = 0.003
Identities = 78/385 (20%), Positives = 166/385 (43%), Gaps = 55/385 (14%)
Query: 257 GLVALSAGSSATNAEKDKLVKENSE---LKSQVTVLKSENNAMANESKQKEERVEELLKR 313
G A G + +E +L + LK +++ L+SE + N + + + + ++
Sbjct: 658 GSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK 717
Query: 314 IHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQ-DAEGKDIPSRPAPLKRHA 372
I +E +E+ +Q E++++ LE L+ L + + + +E K++ +R
Sbjct: 718 IGEIEKEIEQLEQEE---EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE----- 769
Query: 373 TFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQY--ESADESQYNMS---QQVTSLTS 427
E L E L+ ++ + E Q +S ++V+ + +
Sbjct: 770 -----------------LEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEA 812
Query: 428 QLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSR 487
+L + + +L ++ EKE L K I+ L+ ++ L++ + I + +E+LN ++
Sbjct: 813 RLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEE------- 865
Query: 488 LSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLA 547
L + E L++ L++ L + + D E +LR E L + + L K
Sbjct: 866 LEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAK 925
Query: 548 KELLEQNKEEMQTLLAHIEK------SKGDVEAEMERLLLDRSDM----NEQISKYEITI 597
E LE+ E++ E+ S DV+AE++R+ + + I +YE +
Sbjct: 926 LEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVL 985
Query: 598 EANDKELQRLQEQLASLRSDKESLE 622
K L L+E+ A L +++++
Sbjct: 986 ----KRLDELKEKRAKLEEERKAIL 1006
Score = 38.5 bits (90), Expect = 0.039
Identities = 33/197 (16%), Positives = 80/197 (40%), Gaps = 18/197 (9%)
Query: 1514 EKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIK 1573
E+L+ L++ L S ++E R ++ RLD L++ R+ + + L+ + LK ++
Sbjct: 681 ERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLE 740
Query: 1574 DLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQ 1633
+L + + ++ + ++ L+ LE L + + A N LE++
Sbjct: 741 ELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALND-------------LEAR 787
Query: 1634 LRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLYIY 1693
L S+ P + ++ + ++E +++ + ++ L EI+ Q
Sbjct: 788 LSHSRIPEI----QAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR- 842
Query: 1694 RDTRAGKEMQQLRQALG 1710
D + + +
Sbjct: 843 IDLKEQIKSIEKEIENL 859
Score = 38.5 bits (90), Expect = 0.042
Identities = 54/344 (15%), Positives = 125/344 (36%), Gaps = 20/344 (5%)
Query: 122 EMREERIQ----DLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLT 177
E ER+ + L RL ER + E+ + + ++ E L + E L
Sbjct: 183 EENIERLDLIIDEKRQQLERLRREREKAERYQAL----LKEKREYEGY--ELLKEKEALE 236
Query: 178 TDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALWRDV-VDIKRSFTAMQSATEQD 236
+ ++A E++ +E+ + L ++ IK Q ++
Sbjct: 237 RQKEAIERQLASLEEE-LEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEK 295
Query: 237 LSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAM 296
+ ++ +++ R ++ L + AE DKL+ E EL+ ++ + + +
Sbjct: 296 IGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKL 355
Query: 297 ANESKQKEERVEELLKRIHTLEAR----VEEADQNVLLVEEMQQELELLQNTL-RDIARA 351
E + +E +E+L + ++ +E +E++++E+ L+ L R
Sbjct: 356 TEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEEL 415
Query: 352 VIQDAEGKDIPSRPAPLK-RHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYES 410
E D+ + A ++ + +E KL L +++
Sbjct: 416 QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKK--QEWKLEQLAADLSKYEQELYD 473
Query: 411 ADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLR 454
E + ++++ L +L + +AQ E+L+
Sbjct: 474 LKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLK 517
Score = 38.5 bits (90), Expect = 0.042
Identities = 54/286 (18%), Positives = 119/286 (41%), Gaps = 22/286 (7%)
Query: 905 AQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLR---EMVKKVES 961
A+L RL+ + SL+ +L + L + + E ++ ++ E +++ E
Sbjct: 674 AELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEE 733
Query: 962 EKRDQARTIDEGLQKIAVRFGD--DEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDS 1019
+ +++ ++E L + + E + L ++ + D+ L++ L + L
Sbjct: 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL---NDLEARLSH 790
Query: 1020 EKV-TLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKEN 1078
++ +Q + LE E + +E L ++ + + L+ + L+++ +
Sbjct: 791 SRIPEIQAELSKLEEEVSR-------------IEARLREIEQKLNRLTLEKEYLEKEIQE 837
Query: 1079 VVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAH 1138
+ E LK++ + + +N E+L +E EE E L DL +RLG ++ A
Sbjct: 838 LQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQ 897
Query: 1139 LLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARI 1184
L +LE +++E ++ L + A LSE E
Sbjct: 898 LRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED 943
Score = 33.9 bits (78), Expect = 1.1
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 32/234 (13%)
Query: 118 AHLREMREERIQDLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLT 177
A L+ +RE R++ L L L E R E ++L +A + ++E+L
Sbjct: 674 AELQRLRE-RLEGLKRELSSLQSELRRIENRLDE---LSQELSDASRKIGEIEKEIEQLE 729
Query: 178 TDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALWRDVVDIKRSFTAMQSATEQDL 237
+ L+E + E+D EQ + S + A E+DL
Sbjct: 730 QEEEKLKERLEELEEDLSSLEQEIENVKSE---------------LKELEARIEELEEDL 774
Query: 238 SKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMA 297
K+ LN ++S + AE KL +E S +++++ ++ + N +
Sbjct: 775 HKLEEALNDLEARLSH---------SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLT 825
Query: 298 NESKQKEERVEELLKRIHTLEARVEEADQNV----LLVEEMQQELELLQNTLRD 347
E + E+ ++EL ++ L+ +++ ++ + EE+++ELE L+ LRD
Sbjct: 826 LEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRD 879
>gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication,
recombination, and repair].
Length = 908
Score = 61.3 bits (149), Expect = 4e-09
Identities = 124/615 (20%), Positives = 267/615 (43%), Gaps = 35/615 (5%)
Query: 428 QLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSR 487
L++ + + + IE L + S L ++ ++ E +E L K+++
Sbjct: 165 GLEKYEKLSELLKEVIKEAKAKIEELEGQLSELLEDIEDLLEALEEELKELKKLEEIQEE 224
Query: 488 LSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLA 547
+ L+ E++ + + E E E++ RL E + E LK +
Sbjct: 225 QEEEE---------LEQEIEALEERLAELEEEKERLEELKARLLEIESLELEALKIREEE 275
Query: 548 KELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRL 607
LE+ EE++ + +E+ + ++E E+E L + E++ + +++ ++ L++L
Sbjct: 276 LRELERLLEELEEKIERLEELEREIE-ELEEELEGLRALLEELEELLEKLKSLEERLEKL 334
Query: 608 QEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKEL 667
+E+L L S+ E L + LE+ + E+ E+++ L K Q+ +EL
Sbjct: 335 EEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQEL 394
Query: 668 EDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTK 727
++ + ++ L+ + + L++ EE K EE+IN + E + +
Sbjct: 395 KEELAELSAALEEIQEELEELEKELEELERELEELEEE--IKKLEEQINQLESKELMIAE 452
Query: 728 LTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAE 787
L E+ ++ K++ E + EL L+ L + ++ ++ E+
Sbjct: 453 LAGAGEKCPVCGQELPEEHEKELLELYELELEELEEEL-SREKEEAELREEIEELEKELR 511
Query: 788 GDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQL 847
+++ L+ + ++A+++ L + L++LE L+ +K + + QL
Sbjct: 512 ELEEE-LIELLELEEALKEELEEKLEKLENLLEELEELKE------KLQLQQLKEELRQL 564
Query: 848 NRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELK-VQLHLSEDKVDTVQAQ 906
+ +L+EL EE +L + +L+ RE L ++LK ++ LS+ + +
Sbjct: 565 EDRLQELKEL----LEELRLLRTRKEELEELRERLKELKKKLKELEERLSQLEELLQSLE 620
Query: 907 LLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQ 966
L E L+EAE ES + L ++ + ++L E V+++E+E R +
Sbjct: 621 LSEAENELEEAEEELESELEKLNLQAEL-------EELLQAALEELEEKVEELEAEIRRE 673
Query: 967 ARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQE 1026
+ I+ Q +E + L +L ++ L K+L + EQ+ +L+S K L+E
Sbjct: 674 LQRIENEEQLEEKL---EELEQLEEELEQLREELEELLKKLGEIEQLIEELESRKAELEE 730
Query: 1027 KCKFLEIEKEKYNFV 1041
K LE ++ +
Sbjct: 731 LKKELEKLEKALELL 745
Score = 58.2 bits (141), Expect = 4e-08
Identities = 120/632 (18%), Positives = 263/632 (41%), Gaps = 59/632 (9%)
Query: 273 DKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIH--TLEARVEEADQNVLL 330
+K K + LK + K++ + + + E +E+LL+ + E + E Q
Sbjct: 167 EKYEKLSELLKEVIKEAKAKIEELEGQLSELLEDIEDLLEALEEELKELKKLEEIQEEQE 226
Query: 331 VEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRK 390
EE++QE+E L+ L ++ +
Sbjct: 227 EEELEQEIEALEERLAELEEEKER------------------------------------ 250
Query: 391 ETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNI 450
L + +L ++ A + + +++ L +L++ +L ++ RE E L + +
Sbjct: 251 ---LEELKARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREIEELEEEL 307
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRIN 510
E LR LE+ ++ + E L +K++K S L ++ E L+ L +
Sbjct: 308 EGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELE 367
Query: 511 SDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG 570
++ E EL + ++L E + E+L A E +++ EE++ L +E+
Sbjct: 368 ERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKELEELERELE 427
Query: 571 DVEAEMERLLLDRSDMNEQISKYEITIEANDKE---LQRLQEQLASLRSDKESLEAILFD 627
++E E+++L + + + A +K Q L E+ + LE +
Sbjct: 428 ELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCGQELPEEHEKELLELYELELEELE 487
Query: 628 TQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASG 687
+ E+ + + + E+++ L + E +++ L + L++ + E +L+++
Sbjct: 488 EELSREKEEAELREEIEELEKELRELEEELIELLELEEALKEELEEKLEKLENLLEELEE 547
Query: 688 LDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATV 747
L Q Q LK++ + +L E K L++ K E+ + R KK +
Sbjct: 548 LKEKLQLQ--QLKEELRQLEDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKEL 605
Query: 748 KQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDR 807
++ + + L L+ + + + E+A E + + L + + ++ +Q
Sbjct: 606 EERLSQLEELLQSLE---------LSEAENELEEAEEELE-SELEKLNLQAELEELLQAA 655
Query: 808 LSQVLKELEEEKCTLDRI--KRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEK 865
L ++ +++EE + + R + E+ + E+ + L E+L + +LEEL + E +
Sbjct: 656 LEELEEKVEELEAEIRRELQRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLGEIE 715
Query: 866 AILERKISDLKSEREALVTESEELKVQLHLSE 897
++E ++ K+E E L E E+L+ L L E
Sbjct: 716 QLIE-ELESRKAELEELKKELEKLEKALELLE 746
Score = 52.8 bits (127), Expect = 2e-06
Identities = 115/590 (19%), Positives = 244/590 (41%), Gaps = 33/590 (5%)
Query: 608 QEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKEL 667
Q + + K + D LE+ + E L+ ++E K E L+GQ+ L +++
Sbjct: 142 QGEFDAFLKSKPKERKEILDELFGLEKYEKLSELLKEVIKEAKAKIEELEGQLSELLEDI 201
Query: 668 EDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTK 727
ED + +E L + + +++ EE ++ + L + EE
Sbjct: 202 EDLLEALEE----------ELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEE---- 247
Query: 728 LTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQ-QHEDALLRA 786
E E+++A L + + + ++ EL L+ L +L+ I+++ + + E L
Sbjct: 248 -KERLEELKARLLEIES-LELEALKIREEELRELERLLEELEEKIERLEELEREIEELEE 305
Query: 787 EGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQ 846
E + +ALL ++ L + L++LEE+ L+ E A + + ++
Sbjct: 306 ELEGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKE 365
Query: 847 LNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQ 906
L + +LE+ + E LE I +LK E L EE++ +L E +++ ++ +
Sbjct: 366 LEERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKELEELERE 425
Query: 907 LLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQ 966
L E +K+ E L + +A+ +K ++L E +K E +
Sbjct: 426 LEELEEEIKKL----EEQINQLESKELMIAELAGAGEKCPVCGQELPEEHEKELLELYEL 481
Query: 967 ARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDS---EKVT 1023
++E ++++ + E + +L + ++ ELL+ E+ + EK+
Sbjct: 482 E--LEELEEELSREKEEAELREEIEELEKELRELEEELIELLELEEALKEELEEKLEKLE 539
Query: 1024 LQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDL 1083
+ EK + + L L EL ++ ++ L + L+ +E L
Sbjct: 540 NLLEELEELKEKLQLQQLKEELRQLEDRLQELKELLEELRLLRTRKEELEELRER----L 595
Query: 1084 ARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLE 1143
LK+K ++ E +++ + L+ L E E L + L E++ + L+
Sbjct: 596 KELKKKLKELEERLSQLEELLQSLELSEAENE--LEEAEEELESELEKLNLQAELEELLQ 653
Query: 1144 ASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKS 1193
A+ +++E K+ + + +RR R L EK EL ++ + + +
Sbjct: 654 AALEELEEKVEELEAEIRRE-LQRIENEEQLEEKLEELEQLEEELEQLRE 702
Score = 44.4 bits (105), Expect = 7e-04
Identities = 93/549 (16%), Positives = 211/549 (38%), Gaps = 25/549 (4%)
Query: 139 DDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKEKDWIEEE 198
D E+L+++ + + Q ++ E LE+ + +E + + +E E
Sbjct: 203 DLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEEKERLEELKARLLEIE 262
Query: 199 QYFNDYYSSEHARLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGL 258
+ L L R + +++ + L ++ ++ + ++ G L
Sbjct: 263 SLELEALKIREEELRELERLLEELEEK--------IERLEELEREIEELEEELEGLRALL 314
Query: 259 VALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLE 318
L + +++L K +L+ + L+ +K EER++EL +R+ LE
Sbjct: 315 EELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELE 374
Query: 319 ARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQ-----DAEGKDIPSRPAPLKRHAT 373
+E+A + + +EE QEL+ L + + + E +++ L+
Sbjct: 375 KELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKELEELERELEELEEEIK 434
Query: 374 FSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTK 433
++ E A + + + E E ++ L +L + K
Sbjct: 435 KLEEQINQLESKELMIAELAGAGEKCPVCGQELPEEHEKELLELYELELEELEEELSREK 494
Query: 434 AQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQK-NNSRLSKIN 492
+ +E + E+ LE + E+ E L + +++ +
Sbjct: 495 EEAELREEIEELEKELRELEEELIELLELEEALKEELEEKLEKLENLLEELEELKEKLQL 554
Query: 493 ESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLE 552
+ L+ E L++ L + ++ + R +E+L E LK K + LE
Sbjct: 555 QQLKEELRQLEDRLQELKELLEELRL--------LRTRKEELEELRERLKELKKKLKELE 606
Query: 553 QNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLA 612
+ +++ LL +E S + E E+E + E+++ E L+ L+E++
Sbjct: 607 ERLSQLEELLQSLELS--EAENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVE 664
Query: 613 SLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEK 672
L ++ + + + E+ + + EQLE E+++L + E L ++ + + +E+ E
Sbjct: 665 ELEAEIRRELQRIENEEQLEEKLE-ELEQLEEELEQLREELEELLKKLGEIEQLIEELES 723
Query: 673 RAQETKASL 681
R E +
Sbjct: 724 RKAELEELK 732
Score = 42.1 bits (99), Expect = 0.003
Identities = 90/450 (20%), Positives = 182/450 (40%), Gaps = 29/450 (6%)
Query: 1279 RNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALE 1338
R + + ++E R L+ + + L+ ++K L + + K+ + + + L EEK L
Sbjct: 298 REIEELEEELEGLRALLEELEELLE-KLKSLEERLEKLEEKLEKLESELEELAEEKNELA 356
Query: 1339 TKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGA 1398
L + E +++ +EL+ E++ LE + + EE ++ L + +E
Sbjct: 357 KLL---EERLKELEERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELE 413
Query: 1399 RLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCR 1458
L+ E L+ EL E + KLE Q LE + + L E QE E +
Sbjct: 414 ELEKELEELERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCGQELPEEHEK 473
Query: 1459 NITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQ 1518
+ L E EL E++ L+ L++ ++ E+L++
Sbjct: 474 ELLELYELELEELEEELSREKEEAELREEIEELEKELRELEEELIELLELEEALKEELEE 533
Query: 1519 LQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKR--EIKDLS 1576
+ L + E L+E+L Q ELR+ + E ++ L+ + R E+++L
Sbjct: 534 KLEKLENLLEELEELKEKLQLQQLK-EELRQLEDRLQELKELLEELRLLRTRKEELEELR 592
Query: 1577 DAHTQESNKMAQAQQTMRALQEE--------------------KYALETKLSQTKAAANS 1616
+ + K+ + ++ + L+E + LE Q +
Sbjct: 593 ERLKELKKKLKELEERLSQLEELLQSLELSEAENELEEAEEELESELEKLNLQAELEELL 652
Query: 1617 QNELEVKEVARAGLESQLRMSQWPSESPMNGGD-SEEITKLCRERSELRNKLENLHDKIQ 1675
Q LE E LE+++R E+ + EE+ +L E +LR +LE L K+
Sbjct: 653 QAALEELEEKVEELEAEIRRELQRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLG 712
Query: 1676 MLRDQLNSEIKRRQLYIYRDTRAGKEMQQL 1705
+ + E++ R+ + + +++++
Sbjct: 713 EIEQLIE-ELESRKAELEELKKELEKLEKA 741
Score = 40.1 bits (94), Expect = 0.014
Identities = 105/613 (17%), Positives = 227/613 (37%), Gaps = 75/613 (12%)
Query: 37 RQNSDLQRKLDEESVINRKKLEAYRTSQQQQAALVSKLQAKLLQYKQRCKELELEREAPS 96
+ + L+ D + + E + + Q+ +L+ ++ ++R ELE E+E
Sbjct: 193 QLSELLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEEEKER-L 251
Query: 97 TSSYLGPLPSTPLPSALDAAQAHLREMREERIQDLNTALRRLDDERRENEKLRKMNSVYK 156
L L + E +++L + RL++ RE E+L + +
Sbjct: 252 EELKARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREIEELEEELEGLR 311
Query: 157 EQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALW 216
L+E E L + E+L L E++ E + E + N+ RL L
Sbjct: 312 ALLEELEELLEKLKSLEERLE----KLEEKLEKLESELEELAEEKNELAKLLEERLKELE 367
Query: 217 RDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLV 276
L L +L
Sbjct: 368 ER---------------------------------------LEELEKELEKALERLKQLE 388
Query: 277 KENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQ 336
+ ELK ++ L + + E ++ E+ +EEL + + LE +++ EE
Sbjct: 389 EAIQELKEELAELSAALEEIQEELEELEKELEELERELEELEEEIKKL-------EEQIN 441
Query: 337 ELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLAT 396
+LE + + ++A G+ P L + + E +L
Sbjct: 442 QLESKELMIAELA------GAGEKCPVCGQELPEEH----------EKELLELYELELEE 485
Query: 397 HREQLHTMKKQYESADESQ--YNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLR 454
E+L K++ E +E + +++ +L + + L + EK ++N +
Sbjct: 486 LEEELSREKEEAELREEIEELEKELRELEEELIELLELEEALKEELEEKLEKLEN-LLEE 544
Query: 455 VEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMD 514
+E+ + +++ E + L L ++++ L + + + + + +
Sbjct: 545 LEELKEKLQLQQLKEELRQLEDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKE 604
Query: 515 AREVELRGKEDMNRRL----REDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG 570
E + +E + +L A E+L++ L + +E +Q L +E+
Sbjct: 605 LEERLSQLEELLQSLELSEAENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVE 664
Query: 571 DVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQS 630
++EAE R L R + EQ+ + +E ++EL++L+E+L L +E ++ + +S
Sbjct: 665 ELEAE-IRRELQRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLGEIEQLIEELES 723
Query: 631 HLEQSDVKKEQLE 643
+ + K++LE
Sbjct: 724 RKAELEELKKELE 736
Score = 39.4 bits (92), Expect = 0.023
Identities = 86/445 (19%), Positives = 169/445 (37%), Gaps = 42/445 (9%)
Query: 1264 EGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQA 1323
EG + E + + L +++ E L+ + + + E L ++A+
Sbjct: 191 EGQLSELLEDIEDLLEALEEELK----ELKKLEEIQEEQEEEE--LEQEIEALEERLAEL 244
Query: 1324 QQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEK 1383
++ L+E K L S A + E + + L+ L EK+ LE + E +
Sbjct: 245 EEEKERLEELKARLLEIESLELEALKIREEELRELERLLEELEEKIERLEELEREIEELE 304
Query: 1384 SQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKE 1443
+ E L E L ++L E R+ KLE + LE + L+ L +EK
Sbjct: 305 EE--------LEGLRALLEELEELLEKLKSLEERLEKLEEK---LEKLESELEELAEEKN 353
Query: 1444 TNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLM 1503
L+ER + + LE+ + QL ++ EL ++ +Q L
Sbjct: 354 ELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELE 413
Query: 1504 DTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERL----------DTC-----------QA 1542
+ + +L++L++ + E + L+ + + C +
Sbjct: 414 ELEKELEELERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCGQELPEEHEK 473
Query: 1543 SLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKY- 1601
L EL ++ LE + + L+ EI++L + ++ + + AL+EE
Sbjct: 474 ELLELYELELEELEEELSREKEEAELREEIEELEKELRELEEELIELLELEEALKEELEE 533
Query: 1602 ---ALETKLSQTKAAANSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCR 1658
LE L + + ++KE R + + + E + EE+ +L
Sbjct: 534 KLEKLENLLEELEELKEKLQLQQLKEELRQLEDRLQELKELLEELRLLRTRKEELEELRE 593
Query: 1659 ERSELRNKLENLHDKIQMLRDQLNS 1683
EL+ KL+ L +++ L + L S
Sbjct: 594 RLKELKKKLKELEERLSQLEELLQS 618
Score = 39.0 bits (91), Expect = 0.028
Identities = 81/447 (18%), Positives = 172/447 (38%), Gaps = 41/447 (9%)
Query: 1274 VRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEE 1333
K ++++ ++ E ++ + L+REI++L + + + ++ + L+
Sbjct: 268 ALKIREEELRELERLLEELEEKIERLEELEREIEELEEELEGLRALLEELEELLEKLKSL 327
Query: 1334 KYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKC 1393
+ LE + + + E ++KNE + L E++ LE L + +E + ++L +
Sbjct: 328 EERLEKLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELEKALERLKQL 387
Query: 1394 RESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERC 1453
E+ L E L L + + +LE + LE + + L+ +++ E +++L+ +
Sbjct: 388 EEAIQELKEELAELSAALEEIQEELEELEKELEELERELEELEEEIKKLEEQINQLESK- 446
Query: 1454 EHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNC 1513
E + G E+C + + E E++ L+ L
Sbjct: 447 ELMIAELAGAGEKCPVCGQELPE-----EHEKELLELYELELEELEEELSREKEE-AELR 500
Query: 1514 EKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQD------DLKAMTQA 1567
E++++L+K L E E L + +L E +++ +LEN K Q
Sbjct: 501 EEIEELEKELRELEEEL----IELLELEEALKEELEEKLEKLENLLEELEELKEKLQLQQ 556
Query: 1568 LKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVAR 1627
LK E++ L D ++ + + +R L+ K LE + K ELE +
Sbjct: 557 LKEELRQLED----RLQELKELLEELRLLRTRKEELEELRERLKELKKKLKELEERLSQL 612
Query: 1628 AGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKR 1687
L L +S+ +EL E L +++ L Q E
Sbjct: 613 EELLQSLELSE--------------------AENELEEAEEELESELEKLNLQAELEELL 652
Query: 1688 RQLYIYRDTRAGKEMQQLRQALGDSLR 1714
+ + + + ++R+ L
Sbjct: 653 QAALEELEEKVEELEAEIRRELQRIEN 679
Score = 37.8 bits (88), Expect = 0.056
Identities = 115/620 (18%), Positives = 249/620 (40%), Gaps = 64/620 (10%)
Query: 853 KLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETAR 912
K E+L +E + KI +L+ + L+ + E+L L ++ ++ E
Sbjct: 168 KYEKLSELLKEVIKEAKAKIEELEGQLSELLEDIEDLLEALEEELKELKKLEEIQEEQEE 227
Query: 913 RLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDE 972
E L +++ + LA+ EK++ + L E+ + + + E
Sbjct: 228 ---------EELEQEIEALEERLAELEEEKERLEELKARLLEIESLELEALKIREEELRE 278
Query: 973 GLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLE 1032
+ + +E + +L + ++ L++EL + +L+ L+ + LE
Sbjct: 279 LERLL------EELEEKIERLEELEREIEELEEELEGLRALLEELEELLEKLKSLEERLE 332
Query: 1033 IEKEKYNFVISYLLCLFQVEVELSQVTKDRSD-LSHQLSLLQRKKENVVEDLARLKQKYE 1091
+EK + S L L + + EL+++ ++R L +L L+++ E +E L +L++ +
Sbjct: 333 KLEEKLEKLESELEELAEEKNELAKLLEERLKELEERLEELEKELEKALERLKQLEEAIQ 392
Query: 1092 QSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEH 1151
+ E ++ LE++ +E EE E L +L L EE ++ + QLE+ + +
Sbjct: 393 ELKEELAELSAALEEIQEELEELEKELEELERELEELEEEIKKLEEQINQLESKELMIAE 452
Query: 1152 KLSSIGSTLRRIAALRYHAFYTLSE-KEAELARIRAQYDAYKSMDCHTDRSSDLE----R 1206
+ L L E E EL + + K + +LE
Sbjct: 453 LAGAGEKCPVCGQELPEEHEKELLELYELELEELEEELSREKEEAELREEIEELEKELRE 512
Query: 1207 YRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGGEGGEGL 1266
+ L EA ++ +++ +LEN L E L
Sbjct: 513 LEEELIELLELEEALKEELEEKLEKLENLL---------------------------EEL 545
Query: 1267 IDVDPEIVRKGVRNLMQQVAQIERE-RDDLKAMTQALKR--EIKDLSDAHTQESNKMAQA 1323
++ ++ + ++ ++Q+ +E ++ L+ + R E+++L + + K+ +
Sbjct: 546 EELKEKLQLQQLKEELRQLEDRLQELKELLEELRLLRTRKEELEELRERLKELKKKLKEL 605
Query: 1324 QQTMRALQEEKYALET------------KLSQTKAAANSQSEAMDQKNEELQHLREKVLT 1371
++ + L+E +LE +L N Q+E + L+ L EKV
Sbjct: 606 EERLSQLEELLQSLELSEAENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVEE 665
Query: 1372 LELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGD 1431
LE + ++ + +++L + E +L+ E L++EL ++ ++E LE
Sbjct: 666 LEAEIRRE-LQRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLGEIEQLIEELESR 724
Query: 1432 QQRLQMLLQEKETNLHKLQE 1451
+ L+ L +E E L+
Sbjct: 725 KAELEELKKELEKLEKALEL 744
Score = 33.6 bits (77), Expect = 1.2
Identities = 97/593 (16%), Positives = 224/593 (37%), Gaps = 56/593 (9%)
Query: 797 AQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEE 856
++ + + + L + LE + L +K+ + EQ+ + E L +A+LEE
Sbjct: 187 IEELEGQLSELLEDIEDLLEALEEELKELKKLEEIQEEQEEEELEQEIEALEERLAELEE 246
Query: 857 LKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKE 916
K R EE KA L S + E EL+ L ++++ +L E R ++E
Sbjct: 247 EKERLEELKARLLEIESLELEALKIREEELRELERLL----EELEEKIERLEELEREIEE 302
Query: 917 AENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQK 976
E + LL+ L + ++ + ++ E ++ E ++ + + L++
Sbjct: 303 LEEE-LEGLRALLEELEELLEKLKSLEERLEKLEEKLEKLESELEELAEEKNELAKLLEE 361
Query: 977 IAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKE 1036
++ + L +L + L++ + + ++ +L + +QE+ + LE E E
Sbjct: 362 RLKEL-EERLEELEKELEKALERLKQLEEAIQELKEELAELSAALEEIQEELEELEKELE 420
Query: 1037 KYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEM 1096
+ +E EL ++ ++ L Q++ L+ K+ + E ++ E+
Sbjct: 421 E-------------LERELEELEEEIKKLEEQINQLESKELMIAELAGAGEKCPVCGQEL 467
Query: 1097 NNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSI 1156
K L +L + E+ L E + L +LE ++ ++
Sbjct: 468 PEEHEKELLELYELELEELEEELSREKEEAELREEIEELEKELRELEEELIELLELEEAL 527
Query: 1157 GSTLRRI--AALRYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSDLERYRAAQLHA 1214
L +++ +L +++ + + + LE R +
Sbjct: 528 KEELEEKLEKLENLLEELEELKEKLQLQQLKEELRQLEDRL--QELKELLEELRLLRTRK 585
Query: 1215 ESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGGEGGEGLIDVDPEIV 1274
E L E RE+ +++ + +L+ R S + S
Sbjct: 586 EELEELRERL--KELKKKLKELEERLSQLEELLQS------------------------- 618
Query: 1275 RKGVRNLMQQVAQIERERDDLKAMTQALKR--EIKDLSDAHTQESNKMAQAQQTMRALQE 1332
L + ++E ++L++ + L E+++L A +E + + + +
Sbjct: 619 ----LELSEAENELEEAEEELESELEKLNLQAELEELLQAALEELEEKVEELEAEIRREL 674
Query: 1333 EKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQ 1385
++ E +L + E ++Q EEL+ L +K+ +E + + K++
Sbjct: 675 QRIENEEQLEEKLEELEQLEEELEQLREELEELLKKLGEIEQLIEELESRKAE 727
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional.
Length = 880
Score = 59.3 bits (144), Expect = 2e-08
Identities = 122/575 (21%), Positives = 262/575 (45%), Gaps = 47/575 (8%)
Query: 405 KKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNK 464
++ E + N+ + + +L++ ++ ++ E L + +E L E LE+ K
Sbjct: 178 IERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELK 237
Query: 465 REINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKE 524
EI E+ + L S +K ++ ++ E ++ K ++ +++ EL+ K
Sbjct: 238 EEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKV-----KELKELKEKA 292
Query: 525 DMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSK---GDVEAEMERLLL 581
+ +L E ++L+ + LE+ ++ + +E+ + +++ +++ L
Sbjct: 293 EEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEK 352
Query: 582 DRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQ 641
++ E+ YE +A +EL+RL+++L L +K E LE+ + KE+
Sbjct: 353 RLEELEERHELYE-EAKAKKEELERLKKRLTGLTPEKLEKE---------LEELEKAKEE 402
Query: 642 LEHEVQELLVKQESLKGQVVRLNK---ELEDTEKRAQETKASLVQQASG-LDADYQNQIS 697
+E E+ ++ + LK ++ L K EL+ + + L ++ L +Y ++
Sbjct: 403 IEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELK 462
Query: 698 NLKKQNEECVTKLTEEKINLKK-----QNEECVTKLTEEKEQVRAALEKKLHATVKQITE 752
++K+ +E K + + L++ + E + KL E EQ++ LE+KL + E
Sbjct: 463 RIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLK-ELEEKLKKYNLEELE 521
Query: 753 EKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVL 812
+K E +L+ L +L+ I + + L + E K++ + ++ + +++ L+++L
Sbjct: 522 KKAEEYEKLKEKLIKLKGEIKSL----KKELEKLEELKKKLAELEKKLDE-LEEELAELL 576
Query: 813 KELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKI 872
KELEE E E N L++ + +ELK EE E ++
Sbjct: 577 KELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFE-EL 635
Query: 873 SDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETAR-------RLKEAENVGESLR 925
++ + E L E EEL+ + SE++ + ++ + LE +R L+E E E ++
Sbjct: 636 AETEKRLEELRKELEELEKK--YSEEEYEELREEYLELSRELAGLRAELEELEKRREEIK 693
Query: 926 KDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVE 960
K L K L E++K K + L + +++VE
Sbjct: 694 KTLEKLKEELE----EREKAKKELEKLEKALERVE 724
Score = 52.0 bits (125), Expect = 3e-06
Identities = 104/509 (20%), Positives = 212/509 (41%), Gaps = 66/509 (12%)
Query: 274 KLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEE 333
K VKE ELK ++ L+ E ++ ++ EE++ EL +RI L+ +EE ++ V ++E
Sbjct: 228 KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE 287
Query: 334 MQQELELLQ--NTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKP-SVTFRK 390
++++ E + + +++ E KR + + + K
Sbjct: 288 LKEKAEEYIKLSEFYEEYLDELREIE-----------KRLSRLEEEINGIEERIKELEEK 336
Query: 391 ETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNI 450
E +L +++L ++K+ E +E + + ++ + +L++ K +L G E L K +
Sbjct: 337 EERLEELKKKLKELEKRLEELEER-HELYEEAKAKKEELERLKKRLT--GLTPEKLEKEL 393
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKIN----------------ES 494
E L K +E+ +I + L + +++K L K E
Sbjct: 394 EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKEL 453
Query: 495 LQSEKLFLQN------ELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA---- 544
L+ L+ E++ + EL L + +A E LK
Sbjct: 454 LEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELA-EQLKELEEKL 512
Query: 545 -KLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKE 603
K E LE+ EE + L + K KG++++ + L E++ + + + +K+
Sbjct: 513 KKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL--------EKLEELKKKLAELEKK 564
Query: 604 LQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQL----------EHEVQELLVKQ 653
L L+E+LA L + LE + F++ LE+ + E E E++ +
Sbjct: 565 LDELEEELAEL---LKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKEL 621
Query: 654 ESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEE 713
+ L+ ++ + +EL +TEKR +E + L + + ++ + + L E
Sbjct: 622 KKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAE 681
Query: 714 KINLKKQNEECVTKLTEEKEQVRAALEKK 742
L+K+ EE L + KE++ + K
Sbjct: 682 LEELEKRREEIKKTLEKLKEELEEREKAK 710
Score = 50.1 bits (120), Expect = 1e-05
Identities = 115/591 (19%), Positives = 248/591 (41%), Gaps = 57/591 (9%)
Query: 598 EANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLK 657
E K L + +++ E + + +++ + + E++ E+ E+ + L+
Sbjct: 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELR 220
Query: 658 GQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEEC---VTKLTEEK 714
++ +L KE+++ E+ +E I L+K+ E KL E+
Sbjct: 221 EELEKLEKEVKELEELKEE-------------------IEELEKELESLEGSKRKLEEKI 261
Query: 715 INLKKQNEECVTKLTEEKEQVRAALE----KKLHATVKQITEEKDCELSRLQANLCQLQS 770
L+++ EE ++ E +E+V+ E + + + + EE EL ++ L +L+
Sbjct: 262 RELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
Query: 771 HIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESA 830
I+ I ++ ++ +K++ L ++ K ++ RL ELEE + K +
Sbjct: 322 EINGIEERIKEL-----EEKEERLEELKKKLKELEKRLE----ELEERHELYEEAKAKKE 372
Query: 831 GRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELK 890
+ E+L + + +LE+ K EEE + + +I +LK E + L EELK
Sbjct: 373 ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELK 432
Query: 891 ------------VQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADS 938
+ ++ ++ A+L + LKE E LRK+L + + L
Sbjct: 433 KAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
Query: 939 N--FEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQ 996
+ + + A+ K+L E +KK E+ ++ E L++ ++ + K L +
Sbjct: 493 SELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIK-----SLKKE 547
Query: 997 SNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEK-EKYNFVISYLLCLFQVEVEL 1055
+ LKK+L + E+ +L+ E L ++ + L E E+ + L + +EL
Sbjct: 548 LEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLEL 607
Query: 1056 SQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKE 1115
K+ +L L+ + + E+LA +++ E+ + + K + +E EE
Sbjct: 608 KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYEELR 665
Query: 1116 VVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAAL 1166
L+L L G + +++ + + ++ +L + + L
Sbjct: 666 EEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKL 716
Score = 47.0 bits (112), Expect = 1e-04
Identities = 113/562 (20%), Positives = 238/562 (42%), Gaps = 58/562 (10%)
Query: 125 EERIQDLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLR 184
I ++++ L L +E + EK K KE+++E E+L KL L
Sbjct: 206 LREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELE 265
Query: 185 EEMAMKEKDWIEEEQYFNDY-----YSSEHARLLALWRDVVDIKRSFTAMQSATEQDLSK 239
E + +K+ E E+ + + E+ +L + + +D R E+ LS+
Sbjct: 266 ERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREI-------EKRLSR 318
Query: 240 IRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMANE 299
+ ++N ++ ++L K+ EL+ ++ L+ E + + E
Sbjct: 319 LEEEINGIEERIKEL-----------EEKEERLEELKKKLKELEKRLEELE-ERHELYEE 366
Query: 300 SKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRD-IARAVIQDAEG 358
+K K+E +E L KR+ L E+ ++ + +E+ ++E+E + + I + E
Sbjct: 367 AKAKKEELERLKKRLTGLT--PEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKEL 424
Query: 359 KDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNM 418
K K R T ++ L + +L ++K+ + +E + +
Sbjct: 425 KKAIEELKKAKGKCPVCGRELTE------EHRKELLEEYTAELKRIEKELKEIEEKERKL 478
Query: 419 SQQVTSLTSQLDQTK--AQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNS 476
+++ L L + +L ++ + + L + ++ +E+ LEK E ++ E L
Sbjct: 479 RKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEE--LEKKAEEYEKLKEKLIK 536
Query: 477 NLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGK-----EDMNRRLR 531
+++ L K+ E L+ + L+ +LD + ++ EL E++ RL+
Sbjct: 537 LKGEIKSLKKELEKLEE-LKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLK 595
Query: 532 EDLLIANE--DLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQ 589
E NE +LK+A+ E E+ ++++ L + + E +E L R ++ E
Sbjct: 596 ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEEL---RKELEEL 652
Query: 590 ISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQEL 649
KY +++E + L+E+ L + L A L + + E+ E+L+ E++E
Sbjct: 653 EKKY------SEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER 706
Query: 650 LVKQESLKGQVVRLNKELEDTE 671
++ L+ +L K LE E
Sbjct: 707 EKAKKELE----KLEKALERVE 724
Score = 46.6 bits (111), Expect = 1e-04
Identities = 139/643 (21%), Positives = 294/643 (45%), Gaps = 62/643 (9%)
Query: 271 EKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLL 330
+K +K ++ + + E + E + + EL + + LE V+E ++
Sbjct: 180 RLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEE 239
Query: 331 VEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRK 390
+EE+++ELE L+ + R + + + +++ R LK+ I+ K
Sbjct: 240 IEELEKELESLEGSKRKL------EEKIRELEERIEELKKE----------IEELEEKVK 283
Query: 391 E-TKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKN 449
E +L E+ + + YE + + ++++ L +++ + ++ E E +
Sbjct: 284 ELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIK----ELEEKEER 339
Query: 450 IEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRI 509
+E L+ + LEK E+ E E K ++ RL K L EK L+ EL+ +
Sbjct: 340 LEELKKKLKELEKRLEELEERHELYEEAKAK-KEELERLKKRLTGLTPEK--LEKELEEL 396
Query: 510 NSDMDAREVELRGKEDMNRRLR---EDLLIANEDLKNAK-----LAKELLEQNKEEMQTL 561
+ E E+ L+ ++L A E+LK AK +EL E++++E L
Sbjct: 397 EKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKE---L 453
Query: 562 LAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESL 621
L +E E++ + + +++ + E ++ + EL +L+E L+ +E L
Sbjct: 454 LEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLK-KESELIKLKELAEQLKELEEKL 512
Query: 622 EAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASL 681
+ +LE+ + K E+ E +++E L+K LKG++ L KELE E+ ++ A L
Sbjct: 513 KKY------NLEELEKKAEEYE-KLKEKLIK---LKGEIKSLKKELEKLEELKKK-LAEL 561
Query: 682 VQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEK 741
++ L+ + + L++ E V +L E L+ E + EKE R E+
Sbjct: 562 EKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELER---EE 618
Query: 742 KLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQ 801
K +++ ++ EL+ + L +L+ ++++ +++ + ++ L ++
Sbjct: 619 KELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLEL---SREL 675
Query: 802 KAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRT 861
++ L ++ K EE K TL+++K E R + + E+L + + ++EEL+ +
Sbjct: 676 AGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL-----EKLEKALERVEELREKV 730
Query: 862 EEEKAILE----RKISDLKSEREALVTESEELKVQLHLSEDKV 900
++ KA+L+ K+ ++ SE +TE + V++ E+KV
Sbjct: 731 KKYKALLKERALSKVGEIASEIFEELTEGKYSGVRVKAEENKV 773
Score = 40.0 bits (94), Expect = 0.012
Identities = 116/636 (18%), Positives = 268/636 (42%), Gaps = 79/636 (12%)
Query: 943 DKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVAS 1002
D Y + K+L E++K+++ E L+K R + E + ++ ++
Sbjct: 158 DDYENAYKNLGEVIKEIKRRI--------ERLEKFIKRTENIE-----ELIKEKEKELEE 204
Query: 1003 LKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDR 1062
+ +E+ + +L E L+++ K LE KE+ ++E EL + +
Sbjct: 205 VLREINEISSELPELREELEKLEKEVKELEELKEEIE----------ELEKELESLEGSK 254
Query: 1063 SDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLC 1122
L ++ L+ + E + +++ L++K ++ E+ + + ++ L + EE L ++
Sbjct: 255 RKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIK-LSEFYEEYLDELREIE 313
Query: 1123 ARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAAL--RYHAFYTLSEKEAE 1180
RL EE + + +LE ++ +E + +R+ L R+ + K+ E
Sbjct: 314 KRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE 373
Query: 1181 LARIRAQYDAY------KSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLEN 1234
L R++ + K ++ ++E + L+ K ++ + L+
Sbjct: 374 LERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKK 433
Query: 1235 QLDGRASHAGGKMTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDD 1294
++ PV G E E + E++ + L +IE+E +
Sbjct: 434 ----------------AKGKCPVCGRELTE---EHRKELLEEYTAEL----KRIEKELKE 470
Query: 1295 LKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEA 1354
++ + L++E+++L +ES + ++ L E+ LE KL + E
Sbjct: 471 IEEKERKLRKELRELEKVLKKESELI-----KLKELAEQLKELEEKLKKYNL------EE 519
Query: 1355 MDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRT 1414
+++K EE + L+EK++ L+ + ++ +E + ++ K E L+ + L++EL+
Sbjct: 520 LEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAE----LEKKLDELEEELAEL 575
Query: 1415 EARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTI 1474
+ +L + V E ++RL+ L + + + + E+ L+ +
Sbjct: 576 LKELEELGFESV--EELEERLKEL-----EPFYNEYLELKDAEKELEREEKELKKLEEEL 628
Query: 1475 DQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQ 1534
D+ L ELR E++ L++ + E+ +L + L E L+
Sbjct: 629 DKAFEELAETEKRLEELRKELEELEKKYSEEEYEELR--EEYLELSRELAGLRAELEELE 686
Query: 1535 ERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKR 1570
+R + + +L +L+ + R + + +L+ + +AL+R
Sbjct: 687 KRREEIKKTLEKLKEELEEREKAKKELEKLEKALER 722
Score = 33.9 bits (78), Expect = 0.90
Identities = 76/421 (18%), Positives = 159/421 (37%), Gaps = 55/421 (13%)
Query: 1289 ERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAA 1348
E +L + + +KR I+ L + N ++E E +L +
Sbjct: 161 ENAYKNLGEVIKEIKRRIERLEKFIKRTEN-----------IEELIKEKEKELEEVLREI 209
Query: 1349 NSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQ 1408
N S + + EEL+ L ++V LE + E + + L+ KR L+
Sbjct: 210 NEISSELPELREELEKLEKEVKELEELKEEIEELEKE-----------LESLEGSKRKLE 258
Query: 1409 DELSRTEARVTKLELQRVALEGDQQRLQMLLQEKET--NLHKLQERCEHQCRNITGLEER 1466
+++ E R+ +L+ + LE + L+ L ++ E L + E + R I R
Sbjct: 259 EKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSR 318
Query: 1467 CTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMD------------------TSLN 1508
I++ LE EL+ +++ L++ L + L
Sbjct: 319 LEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLK 378
Query: 1509 SQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQAL 1568
+ ++L+K L E K ++E + A + EL+++ + ++LK
Sbjct: 379 KRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKC 438
Query: 1569 KREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARA 1628
++L++ H + + ++ +++E +E K + + EL E
Sbjct: 439 PVCGRELTEEH--RKELLEEYTAELKRIEKELKEIEEKERKLR------KELRELEKVLK 490
Query: 1629 GLESQLRMSQWPS-----ESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNS 1683
+++ + E + + EE+ K E +L+ KL L +I+ L+ +L
Sbjct: 491 KESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK 550
Query: 1684 E 1684
Sbjct: 551 L 551
Score = 32.7 bits (75), Expect = 2.5
Identities = 76/407 (18%), Positives = 166/407 (40%), Gaps = 33/407 (8%)
Query: 1274 VRKGVRNLMQQVAQIER---ERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRAL 1330
+ K + L +++ IE E ++ + + LK+++K+L +E + + + +A
Sbjct: 312 IEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEK-RLEELEERHELYEEAKAK 370
Query: 1331 QEEKYALETKLS-QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDK 1389
+EE L+ +L+ T + E +++ EE++ E++ + + + +E +
Sbjct: 371 KEELERLKKRLTGLTPEKLEKELEELEKAKEEIE---EEISKITARIGELKKEIKELKKA 427
Query: 1390 LMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKL 1449
+ + +++ + R L +E + EL+R+ E L+E E KL
Sbjct: 428 IEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKE---------LKEIEEKERKL 478
Query: 1450 QERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNS 1509
++ + + E LK +QL E+ E + L + +
Sbjct: 479 RKE-LRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKL 537
Query: 1510 QSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNR-LENQDDLKAMTQAL 1568
+ + LK+ + L + + L+++LD + LAEL ++ E+ ++L+
Sbjct: 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELE------ 591
Query: 1569 KREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARA 1628
+K+L + E ++ A++ + ++E LE +L + EL E
Sbjct: 592 -ERLKELEPFY-NEYLELKDAEKELEREEKELKKLEEELDKAFE------ELAETEKRLE 643
Query: 1629 GLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQ 1675
L +L + EE +L RE + LR +LE L + +
Sbjct: 644 ELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRRE 690
>gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional.
Length = 880
Score = 52.3 bits (126), Expect = 2e-06
Identities = 76/452 (16%), Positives = 176/452 (38%), Gaps = 31/452 (6%)
Query: 1266 LIDVDPEIVRKGVRNLMQQVAQIERERDDL----------KAMTQALKREIKDLSDAHTQ 1315
L + +I K ++L +++ +E E +L + + + E ++ + H +
Sbjct: 189 LDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEE 248
Query: 1316 ESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKV------ 1369
++ + + L+E E + + E +++ EE L +
Sbjct: 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDAD 308
Query: 1370 -LTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVAL 1428
+E + + + D+L +CR + + E +L+++ E R +L + L
Sbjct: 309 AEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAEL 368
Query: 1429 EGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGE 1488
E + + + ++++ + +L+E E + + +++L + E
Sbjct: 369 ESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE 428
Query: 1489 TELRGEIQTLQRNLMDT-SLNSQSNCEKLKQ-LQKLLHSAENEKRVLQERLDTCQASLAE 1546
EL ++T + + + +L C + Q ++ H E+ +ER++ +A L +
Sbjct: 429 AELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEED--RERVEELEAELED 486
Query: 1547 LRRQQ------VNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEK 1600
L + + R E+ + + + L+ +DL + + + + ++ L+E
Sbjct: 487 LEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERA 546
Query: 1601 YALETKLSQTKAAANSQNELEVKEVAR--AGLESQLRMSQWPSESPMNGGDS-EEITKLC 1657
LE + + + AA E E +E A L S+L + ES I
Sbjct: 547 AELEAEAEEKREAAAEA-EEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAE 605
Query: 1658 RERSELRNKLENLHDKIQMLRDQLNSEIKRRQ 1689
E LR K E L + R++L + +R++
Sbjct: 606 DEIERLREKREALAELNDERRERLAEKRERKR 637
Score = 45.8 bits (109), Expect = 2e-04
Identities = 103/502 (20%), Positives = 205/502 (40%), Gaps = 50/502 (9%)
Query: 391 ETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNI 450
ET T RE+ E E ++ +++ L + D A+ + EA+
Sbjct: 265 ETIAETERER--------EELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR 316
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRIN 510
E L L E ++ N + ++++ L + E L+ E L++EL+
Sbjct: 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAR 376
Query: 511 SDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIE---K 567
++ R E+ E+ LRE A DL NA+ E L + ++E++ A +E +
Sbjct: 377 EAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLR 436
Query: 568 SKGDVEAEMERLL-----------LDRSDMNEQISKYEITIEANDKELQRLQEQLASLRS 616
+ + E E LL ++ S E I + +E + EL+ L+E++ +
Sbjct: 437 TARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEE 496
Query: 617 DKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQE 676
E E L + + +E+ + ++E LE + E E + + L + + E A+E
Sbjct: 497 RLERAED-LVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEE 555
Query: 677 TKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVR 736
+ + +A + + +++ L + E L E +L++ + + E
Sbjct: 556 KREA-AAEAEEEAEEAREEVAELNSKLAE----LKERIESLERIRT--LLAAIADAEDEI 608
Query: 737 AALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLI 796
L +K A + E ++ L+ + +L++ D E + A DK++A
Sbjct: 609 ERLREKREALAELNDERRE-RLAEKRERKRELEAEFD------EARIEEAREDKERA--- 658
Query: 797 AQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEE 856
+ +++ + L EL EE+ L + G E + + LRE+ ++E
Sbjct: 659 -----EEYLEQVEEKLDELREERDDL----QAEIGAVENELEELEELRERREALENRVEA 709
Query: 857 LKTRTEEEKAILERKISDLKSE 878
L+ +E + LE DL++E
Sbjct: 710 LEALYDEAEE-LESMYGDLRAE 730
Score = 45.4 bits (108), Expect = 3e-04
Identities = 98/507 (19%), Positives = 211/507 (41%), Gaps = 55/507 (10%)
Query: 268 TNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTL--EARVEEAD 325
E + L E +L+ + + E +A E + ER+EEL + L EA +++AD
Sbjct: 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDAD 308
Query: 326 QNVLL--VEEMQQELELLQNTLRDIARAVIQDAEG---------KDIPSRPAPLKRHATF 374
+ EE++ E L++ L + R Q D+ R L+ A
Sbjct: 309 AEAVEARREELEDRDEELRDRLEE-CRVAAQAHNEEAESLREDADDLEERAEELREEAAE 367
Query: 375 SARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKA 434
+ +V R+E ++ E++ +++++ A N + L + D+ +
Sbjct: 368 LESELEEAREAVEDRRE-EIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
Query: 435 QLAQVGREKEALVKNIEMLR--------------VEKS----ALEKNKREINEMVESLNS 476
+ A++ + +E VE S +E+++ + E+ L
Sbjct: 427 REAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELED 486
Query: 477 NLDKVQKNNSRLSKINESLQSEKLF--LQNELDRINSDMDAREVELRGKEDMNRRLREDL 534
++V++ RL + + +++E L+ + + + R + K + LRE
Sbjct: 487 LEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERA 546
Query: 535 LIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERL------LLDRSDMNE 588
+ + + A E+ EE + +A + +++ +E L L +D +
Sbjct: 547 AELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAED 606
Query: 589 QIS----KYEITIEANDKELQRLQEQLASLRSDKESL-EAILFDTQSHLEQSDVKKEQLE 643
+I K E E ND+ +RL E+ R + EA + + + E+++ EQ+E
Sbjct: 607 EIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQVE 666
Query: 644 HEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKA---------SLVQQASGLDADYQN 694
++ EL +++ L+ ++ + ELE+ E+ + +A +L +A L++ Y +
Sbjct: 667 EKLDELREERDDLQAEIGAVENELEELEELRERREALENRVEALEALYDEAEELESMYGD 726
Query: 695 QISNLKKQNEECVTKLTEEKINLKKQN 721
+ L+++N E + ++ E +L QN
Sbjct: 727 LRAELRQRNVETLERMLNETFDLVYQN 753
Score = 45.0 bits (107), Expect = 4e-04
Identities = 108/616 (17%), Positives = 223/616 (36%), Gaps = 122/616 (19%)
Query: 796 IAQQDQKAIQDRLSQVLKELEEEKCTLDRI--KRESAGRSEQDRNTINTLREQ------- 846
I ++++K + +RL+ + EL E ++R +RE A + + + + E+
Sbjct: 196 IEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELET 255
Query: 847 LNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQ 906
L + L E TE E+ L ++ DL+ E L E ++L + L + + V+A+
Sbjct: 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEAR 315
Query: 907 LLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQ 966
E R E LR L + + N E + + DL E + E R++
Sbjct: 316 REELEDRD-------EELRDRLEECRVAAQAHNEEAESLREDADDLEERAE----ELREE 364
Query: 967 ARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQE 1026
A ++ L+ R + D+ ++ +L+ E L+E
Sbjct: 365 AAELESELE------------EAREAVEDRREEIE--------------ELEEEIEELRE 398
Query: 1027 KCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARL 1086
+ ++ E L ++ ++R +L + + L+ E +
Sbjct: 399 RFGDAPVDLGN-------------AEDFLEELREERDELREREAELEATLRTARERVEEA 445
Query: 1087 KQKYE--------QSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAH 1138
+ E Q VE + V + ++E E+ + +L A L EE V
Sbjct: 446 EALLEAGKCPECGQPVEGSPHV-----ETIEEDRER---VEELEAELEDLEEEVEEVEER 497
Query: 1139 LLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKS-MDCH 1197
L + E + E ++ + + L T+ EK +R + ++ +
Sbjct: 498 LERAEDLVE-AEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEK 556
Query: 1198 TDRSSDLERYRAAQLHAESLLEARE---KSHRQQVNRLENQLDGRASHAGGKMTSPSRRY 1254
+ +++ E + L ++ K + + R+ L A
Sbjct: 557 REAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIA-------------- 602
Query: 1255 SPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKRE--------- 1305
D + EI R +R + +A++ ER + A + KRE
Sbjct: 603 -------------DAEDEIER--LREKREALAELNDERRERLAEKRERKRELEAEFDEAR 647
Query: 1306 IKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHL 1365
I++ + + + Q ++ + L+EE+ L+ ++ A ++ E +++ E + L
Sbjct: 648 IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEI----GAVENELEELEELRERREAL 703
Query: 1366 REKVLTLELTLSNVSE 1381
+V LE E
Sbjct: 704 ENRVEALEALYDEAEE 719
Score = 42.3 bits (100), Expect = 0.003
Identities = 124/598 (20%), Positives = 250/598 (41%), Gaps = 76/598 (12%)
Query: 546 LAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDK--- 602
L ++ E+ ++++ L +E +++ E+ER R E + + +E +++
Sbjct: 192 LKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE 251
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR 662
EL+ L+ ++ LR E + + + E+LE E +LL +
Sbjct: 252 ELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEA 311
Query: 663 LNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLK---KQNEECVTKLTEEKINLKK 719
+ E+ E R +E + L + A + + +L+ EE +L EE L+
Sbjct: 312 VEARREELEDRDEELRDRLEECRVAAQA-HNEEAESLREDADDLEERAEELREEAAELES 370
Query: 720 QNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQH 779
+ EE + + +E++ LE+++ ++ + +L + L +L+ D++ ++
Sbjct: 371 ELEEAREAVEDRREEI-EELEEEIEELRERF-GDAPVDLGNAEDFLEELREERDELRERE 428
Query: 780 EDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNT 839
+ L A + ++R+ + LE KC E + E T
Sbjct: 429 AE--LEA-------------TLRTARERVEEAEALLEAGKCPECGQPVEGSPHVE----T 469
Query: 840 INTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDK 899
I RE++ A+LE+L+ EE + LER +++E E L E++
Sbjct: 470 IEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRI-----ERL-------EER 517
Query: 900 VDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKV 959
+ ++ + E ++E E LR+ + + + + + ++ RE V ++
Sbjct: 518 REDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAEL 577
Query: 960 ES------EKRDQARTIDEGLQKIAVRFGDD-----EKQALRNQLNDQSNDVASLKKELL 1008
S E+ + I L IA D+ EK+ +LND+ + + K+E
Sbjct: 578 NSKLAELKERIESLERIRTLLAAIA-DAEDEIERLREKREALAELNDERRERLAEKRE-- 634
Query: 1009 QAEQIRLDLDSEKV-TLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSH 1067
+ ++ + D ++ +E + E+Y L QVE +L ++ ++R DL
Sbjct: 635 RKRELEAEFDEARIEEAREDKE----RAEEY---------LEQVEEKLDELREERDDLQA 681
Query: 1068 QLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARL 1125
++ + EN +E+L L+++ E + NRV LE L E EE E + DL A L
Sbjct: 682 EIGAV----ENELEELEELRERRE---ALENRVEA-LEALYDEAEELESMYGDLRAEL 731
Score = 41.2 bits (97), Expect = 0.006
Identities = 99/526 (18%), Positives = 212/526 (40%), Gaps = 59/526 (11%)
Query: 690 ADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQ 749
+D + + LK Q EE K E++N + + + E E+ R + +
Sbjct: 183 SDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEV 242
Query: 750 IT--EEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAI--- 804
+ EE+ EL L+A + L+ I + ++ E+ +++ + ++ +
Sbjct: 243 LEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEA 302
Query: 805 ------QDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELK 858
+ + +ELE+ L E ++ +LRE LEE
Sbjct: 303 GLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRED----ADDLEERA 358
Query: 859 TRTEEEKAILE-------RKISDLKSEREALVTESEELK-------VQLHLSEDKVDTVQ 904
EE A LE + D + E E L E EEL+ V L +ED ++ ++
Sbjct: 359 EELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELR 418
Query: 905 AQLLETARRLKEAENVGESLRKDLLDTKTHLADSN-------FEKDKYAKSNKDLREMVK 957
+ E R E E + R+ + + + L E + ++ ++ RE V+
Sbjct: 419 EERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVE 478
Query: 958 KVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASL---KKELLQAEQIR 1014
++E+E D ++E +++ E + +L ++ D+ L ++E ++ ++ R
Sbjct: 479 ELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRER 538
Query: 1015 L--------DLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLS 1066
+L++E +E E E E+ ++ L +L+++ K+R +
Sbjct: 539 AEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAEL------NSKLAEL-KERIESL 591
Query: 1067 HQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDL---VKECEEK--EVVLLDL 1121
++ L + +++ RL++K E E+N+ + L + +E E + E + +
Sbjct: 592 ERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEA 651
Query: 1122 CARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALR 1167
AEE + L +L + D++ ++ ++ + L + LR
Sbjct: 652 REDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELR 697
Score = 40.8 bits (96), Expect = 0.007
Identities = 93/523 (17%), Positives = 199/523 (38%), Gaps = 65/523 (12%)
Query: 277 KENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQ 336
KE +L ++ L+SE + E ++ EE+ E+ + + +EE ++ +E ++
Sbjct: 199 KEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEA 258
Query: 337 ELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLAT 396
E+E L+ T+ T R + V +E L
Sbjct: 259 EIEDLRETIA-------------------------ETERER--EELAEEVRDLRER-LEE 290
Query: 397 HREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVE 456
E+ + + D + + L + ++ + +L + +A + E LR +
Sbjct: 291 LEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLRED 350
Query: 457 KSALEKNKREINEMVESLNSNLDKVQKN-NSRLSKINESLQSEKLFLQNELDRINSDMDA 515
LE+ E+ E L S L++ ++ R +I E L+ E++ +
Sbjct: 351 ADDLEERAEELREEAAELESELEEAREAVEDRREEIEE--------LEEEIEELRERFGD 402
Query: 516 REVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLA------------ 563
V+L ED LRE+ E + + EE + LL
Sbjct: 403 APVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVE 462
Query: 564 ---HI------EKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASL 614
H+ + ++EAE+E L + ++ E++ + E +EA + ++RL+E+ L
Sbjct: 463 GSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEA-EDRIERLEERREDL 521
Query: 615 RSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRA 674
+ + + E+ + +LE E +E + + +E+ + +
Sbjct: 522 EELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKL 581
Query: 675 QETKASL-----VQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLT 729
E K + ++ AD +++I L+++ E E + L ++ E +L
Sbjct: 582 AELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRER-KRELE 640
Query: 730 EEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHI 772
E ++ R ++ ++ E+ + +L L+ LQ+ I
Sbjct: 641 AEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEI 683
Score = 38.5 bits (90), Expect = 0.036
Identities = 107/626 (17%), Positives = 236/626 (37%), Gaps = 78/626 (12%)
Query: 951 DLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQA 1010
D R V++V S++R + +++ + + L ++L + ++ +++ QA
Sbjct: 173 DARLGVERVLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQA 232
Query: 1011 EQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLS 1070
+ R + D +E+ + LE + + + + +++ ++R +L+ ++
Sbjct: 233 RETRDEADEVLEEHEERREELETLEAE----------IEDLRETIAETEREREELAEEVR 282
Query: 1071 LLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEE 1130
L+ + E + E+ L + V E+L EE L + E
Sbjct: 283 DLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNE 342
Query: 1131 RVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQY-D 1189
+ LE +++ + + + S L + E E E+ +R ++ D
Sbjct: 343 EAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGD 402
Query: 1190 AYKSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLD-GRASHAGGKMT 1248
A + D +L R E+ LEA ++ R++V E L+ G+ G
Sbjct: 403 APVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECG---- 458
Query: 1249 SPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKD 1308
PV G E + + ++V ++E E +DL+ + ++ ++
Sbjct: 459 ------QPVEGSPHVETIEEDR------------ERVEELEAELEDLEEEVEEVEERLER 500
Query: 1309 LSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREK 1368
D E + L+E + LE +++ + + E ++ E L +
Sbjct: 501 AEDLVEAEDR--------IERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAE 552
Query: 1369 VLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLEL---QR 1425
E ++ +++ + RE A L+++ L++ + E T L
Sbjct: 553 AEEKR-------EAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAE 605
Query: 1426 VALEGDQQRLQMLLQEKETNLHKLQERCE--------HQCRNITGLEERCTSLKTTIDQL 1477
+E +++ + L + + +L E+ E I E + ++Q+
Sbjct: 606 DEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQV 665
Query: 1478 NLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQ--- 1534
L+ +L+ EI ++ L E+L++L++ + EN L+
Sbjct: 666 EEKLDELREERDDLQAEIGAVENEL-----------EELEELRERREALENRVEALEALY 714
Query: 1535 ---ERLDTCQASL-AELRRQQVNRLE 1556
E L++ L AELR++ V LE
Sbjct: 715 DEAEELESMYGDLRAELRQRNVETLE 740
>gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family. This
family consists of the 116kDa V-type ATPase (vacuolar
(H+)-ATPases) subunits, as well as V-type ATP synthase
subunit i. The V-type ATPases family are proton pumps
that acidify intracellular compartments in eukaryotic
cells for example yeast central vacuoles,
clathrin-coated and synaptic vesicles. They have
important roles in membrane trafficking processes. The
116kDa subunit (subunit a) in the V-type ATPase is part
of the V0 functional domain responsible for proton
transport. The a subunit is a transmembrane glycoprotein
with multiple putative transmembrane helices it has a
hydrophilic amino terminal and a hydrophobic carboxy
terminal. It has roles in proton transport and assembly
of the V-type ATPase complex. This subunit is encoded by
two homologous gene in yeast VPH1 and STV1.
Length = 707
Score = 51.6 bits (124), Expect = 3e-06
Identities = 56/302 (18%), Positives = 110/302 (36%), Gaps = 46/302 (15%)
Query: 585 DMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEH 644
D+NE +S ++ + ++ +L L S ++ + + + DV +
Sbjct: 14 DLNEDVSAFQRKFVNEVRRCDEVERKLRKLESK---IKKLGIPLKDTGGKPDVPPSKEFL 70
Query: 645 EVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNE 704
+++E ++ E+ KE+E+ + ++ L + + LD + S L + E
Sbjct: 71 DLEEEILDLEAE-------IKEVEENLESLEKEINELEEWLNVLD----EEKSFLDENLE 119
Query: 705 ECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQAN 764
E E NL + + +R A KL I EK R
Sbjct: 120 E-----LSELSNLD-----------IDFKYLRGAEGLKLGFVAGVINREKLEAFERELWR 163
Query: 765 LCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDR 824
C+ +I + ED K ++ + L +V K L+ L
Sbjct: 164 ACRGYIRQAEIEEPLED------PKKTVFIIFFVGKED-----LDKVKKILDSFGFELYD 212
Query: 825 IKRESAGRSEQDRNTINT----LREQLNRTVAKLEELKTRTEEEKAILERKISDLKSERE 880
+ RSE + +N L+ L +T + LE++ + +E + ++S K+ E
Sbjct: 213 VPETEGERSEL-ISKVNKRIEELQRVLEQTESHLEKVLVKIADELLAWDEQVSKEKAVYE 271
Query: 881 AL 882
L
Sbjct: 272 TL 273
Score = 37.7 bits (88), Expect = 0.054
Identities = 55/327 (16%), Positives = 109/327 (33%), Gaps = 51/327 (15%)
Query: 416 YNMSQQVTSLTSQLDQTKAQLAQVGREKEALV--KNIEMLRVEKSALEKNKREINEMVES 473
+ L + K + + E L +E+ L+ + ++
Sbjct: 31 RRCDEVERKLRKLESKIKKLGIPLKDTGGKPDVPPSKEFLDLEEEILD-----LEAEIKE 85
Query: 474 LNSNLDKVQKN-NSRLSKINESLQSEKLFLQN-ELDRINSDMDAREVELRGKEDMN---- 527
+ NL+ ++K N +N + + +N E S++D LRG E +
Sbjct: 86 VEENLESLEKEINELEEWLNVLDEEKSFLDENLEELSELSNLDIDFKYLRGAEGLKLGFV 145
Query: 528 ----RRLREDLLI-----ANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMER 578
R + + A +E LE K+ + + ++
Sbjct: 146 AGVINREKLEAFERELWRACRGYIRQAEIEEPLEDPKKTVFIIFFVGKE----------- 194
Query: 579 LLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVK 638
D + + + + + + E ++ + E L+ +L T+SHLE+ VK
Sbjct: 195 ---DLDKVKKILDSFGFELYDVPETEGERSELISKVNKRIEELQRVLEQTESHLEKVLVK 251
Query: 639 KEQLEHEVQELLVKQESLKGQVVRLNKELEDT----------EKRAQETKASLVQQASGL 688
E + K+++ + LN DT K ++ KA+L + +
Sbjct: 252 IADELLAWDEQVSKEKA-VYET--LNLFNYDTKTLIAEGWVPAKDLEKLKAAL--ENATE 306
Query: 689 DADYQNQISNLKKQNEECVTKLTEEKI 715
+ I N + NEE T L K
Sbjct: 307 GSGSVPSIENDIETNEEPPTYLKNNKF 333
Score = 33.1 bits (76), Expect = 1.7
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 265 SSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEA 324
E+ KL K S++K LK + +L + I LEA ++E
Sbjct: 31 RRCDEVER-KLRKLESKIKKLGIPLKDTG---GKPDVPPSKEFLDLEEEILDLEAEIKEV 86
Query: 325 DQNVLLVE----EMQQELELLQNTLRDIARAVIQDAEGKDI 361
++N+ +E E+++ L +L + + + +E ++
Sbjct: 87 EENLESLEKEINELEEWLNVLDEEKSFLDENLEELSELSNL 127
Score = 30.8 bits (70), Expect = 8.0
Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 52/250 (20%)
Query: 868 LERKISDLKSEREALVTESEELKVQLHLSEDK-VDTVQAQLLETARRLKEAENVGESLRK 926
+ERK+ L+S+ + L ++ + + K ++ ++L+ +KE E ESL K
Sbjct: 36 VERKLRKLESKIKKLGIPLKDTGGKPDVPPSKEFLDLEEEILDLEAEIKEVEENLESLEK 95
Query: 927 DLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFG-DDE 985
++ +L E + ++ EK +DE L++++ D +
Sbjct: 96 EIN---------------------ELEEWLNVLDEEKSF----LDENLEELSELSNLDID 130
Query: 986 KQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYL 1045
+ LR + VA + R + + EIE+ + +
Sbjct: 131 FKYLRGAEGLKLGFVAGVINREKLEAFERELWR----ACRGYIRQAEIEEPLEDPKKTVF 186
Query: 1046 LCLFQVEVELSQVTK-----------------DRSDLSH----QLSLLQRKKENVVEDLA 1084
+ F + +L +V K +RS+L ++ LQR E L
Sbjct: 187 IIFFVGKEDLDKVKKILDSFGFELYDVPETEGERSELISKVNKRIEELQRVLEQTESHLE 246
Query: 1085 RLKQKYEQSV 1094
++ K +
Sbjct: 247 KVLVKIADEL 256
>gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy
production and conversion].
Length = 660
Score = 51.2 bits (123), Expect = 5e-06
Identities = 55/276 (19%), Positives = 97/276 (35%), Gaps = 35/276 (12%)
Query: 785 RAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLR 844
EG+K L + + Q LS +L E+ + R + GR + L
Sbjct: 36 LEEGEKGLKELEKLKVAEVAQISLSSLLSEVLD----YLRSVKGLEGRLFILPEEVEKLE 91
Query: 845 EQLNRTVA---KLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSED--- 898
+L E+ + EE LE ++S+L E E L EEL+ +L D
Sbjct: 92 AELKSLEEVIKPAEKFSSEVEELTRKLEERLSELDEELEDLEDLLEELEPLAYLDFDLSL 151
Query: 899 ---------KVDTVQAQLLETARRL--KEAENVGESLRKDLLDTKTHLADSNFEKDKYAK 947
++ V+ + LE + E GE++ ++ H A+ + K
Sbjct: 152 LRGLKFLLVRLGLVRREKLEALVGVIEDEVALYGENVEASVVIVVAHGAEDLDKVSKIL- 210
Query: 948 SNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKEL 1007
N+ E+ +V + I E + I E Q L + +A E
Sbjct: 211 -NELGFELY-EVPEFDGGPSELISELEEVI------AEIQDELESLRSELEALAEKIAEE 262
Query: 1008 LQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVIS 1043
L A + L+++ + K + + +Y I
Sbjct: 263 LLAVREILEIEKALGDVLSK-----LARTEYTLAIE 293
Score = 42.7 bits (101), Expect = 0.002
Identities = 59/302 (19%), Positives = 109/302 (36%), Gaps = 45/302 (14%)
Query: 364 RPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADES--QYNMSQQ 421
RP +K+ + + P + + L L +++ + E
Sbjct: 2 RPEKMKK--VSIIGLKSELDPVLAELHDFGLV----HLEDLEEGEKGLKELEKLKVAEVA 55
Query: 422 VTSLTSQLDQTKAQLAQVG---REKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNL 478
SL+S L + L V L + +E L E +LE E+ + E +S +
Sbjct: 56 QISLSSLLSEVLDYLRSVKGLEGRLFILPEEVEKLEAELKSLE----EVIKPAEKFSSEV 111
Query: 479 DK-VQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKE------DMNRRLR 531
++ +K RLS+++E L E L E + +D LRG + + RR +
Sbjct: 112 EELTRKLEERLSELDEEL--EDLEDLLEELEPLAYLDFDLSLLRGLKFLLVRLGLVRREK 169
Query: 532 EDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVE---AEMERLLLDRSDMN- 587
+ L+ E + + ++AH + V E+ L + + +
Sbjct: 170 LEALVGV----IEDEVALYGENVEASVVIVVAHGAEDLDKVSKILNELGFELYEVPEFDG 225
Query: 588 ---EQISKYEITIEANDKELQRLQEQLASLRSDKE----------SLEAILFDTQSHLEQ 634
E IS+ E I EL+ L+ +L +L +E L D S L +
Sbjct: 226 GPSELISELEEVIAEIQDELESLRSELEALAEKIAEELLAVREILEIEKALGDVLSKLAR 285
Query: 635 SD 636
++
Sbjct: 286 TE 287
Score = 38.5 bits (90), Expect = 0.032
Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 20/206 (9%)
Query: 629 QSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKA--SLVQQAS 686
Q L + V+ L + L +V +L EL+ E+ + + S V++ +
Sbjct: 56 QISLSSLLSEVLDYLRSVKGLEGRLFILPEEVEKLEAELKSLEEVIKPAEKFSSEVEELT 115
Query: 687 GLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEK-EQVRAALEK--KL 743
+ +++ + E+ E++ + ++ L K VR L + KL
Sbjct: 116 RKLEERLSELDEELEDLED-----LLEELEPLAYLDFDLSLLRGLKFLLVRLGLVRREKL 170
Query: 744 HATVKQITEEKDCELSRLQANLCQLQSH-------IDKICQQ---HEDALLRAEGDKQQA 793
A V I +E ++A++ + +H + KI + + +G +
Sbjct: 171 EALVGVIEDEVALYGENVEASVVIVVAHGAEDLDKVSKILNELGFELYEVPEFDGGPSEL 230
Query: 794 LLIAQQDQKAIQDRLSQVLKELEEEK 819
+ ++ IQD L + ELE
Sbjct: 231 ISELEEVIAEIQDELESLRSELEALA 256
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain. This domain is
found at the N terminus of SMC proteins. The SMC
(structural maintenance of chromosomes) superfamily
proteins have ATP-binding domains at the N- and
C-termini, and two extended coiled-coil domains separated
by a hinge in the middle. The eukaryotic SMC proteins
form two kind of heterodimers: the SMC1/SMC3 and the
SMC2/SMC4 types. These heterodimers constitute an
essential part of higher order complexes, which are
involved in chromatin and DNA dynamics. This family also
includes the RecF and RecN proteins that are involved in
DNA metabolism and recombination.
Length = 1162
Score = 50.0 bits (119), Expect = 1e-05
Identities = 119/777 (15%), Positives = 271/777 (34%), Gaps = 22/777 (2%)
Query: 269 NAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNV 328
E++ L + E K + K + + +K++EE ELLK E+ ++
Sbjct: 262 EKEEEILAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESE 321
Query: 329 LLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTF 388
++++++EL+ + + + + + +
Sbjct: 322 KELKKLEKELKKEK-------EEIEELEKELKELEIKREAEEEEEEQLEKLQEKLEQLEE 374
Query: 389 RKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVK 448
K E+L + K E E + ++ L +L + + L + +++E +
Sbjct: 375 ELLAKKKLESERLSSAAKLKEEELELKNEEEKEAKLL-LELSEQEEDLLKEEKKEELKIV 433
Query: 449 NIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDR 508
+E + + + ++L DK++ S L L+ L R
Sbjct: 434 EELEESLETKQGKLTEEKEELEKQALKLLKDKLELKKSEDLLKETKLVKLLEQLELLLLR 493
Query: 509 INSD-MDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEK 567
+ +E + R + L +D + + + ++ +A I +
Sbjct: 494 QKLEEASQKESKAREGLAVLLALIKDGVGLRIISAAGRGGDLGVAVANYKVAISVAVIVE 553
Query: 568 S--KGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAIL 625
D E ++L+ +++ + + L+ + + L
Sbjct: 554 VSAVADEVDERQKLVRALTELPLPARTFVLLDPLLKLPLKSIAVLEIDPALNLAQLNKAT 613
Query: 626 FDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQA 685
+ +++ V + L+ L++ K +R LE+ E KASL +
Sbjct: 614 LEADEDDKRAKVVEGILKDTELTKLLESAKAKESGLRKGVSLEEGLAEKSELKASLSELT 673
Query: 686 SGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHA 745
L A+ + Q + + + + EE +++ +E + KL EKE++ L K+
Sbjct: 674 KELLAEQELQEKAESELAKNEILRRQEEIKKKEQRIKEELKKLKLEKEEL---LADKVQE 730
Query: 746 TVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQ 805
+I EE +++ + + K ++ E+ + +K+ A + ++ ++
Sbjct: 731 AQDKINEELKLLEQKIKEKEEEEEKSRLKKEEEEEEKSELSLKEKELAEEEEKTEKLKVE 790
Query: 806 DRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLE-ELKTRTEEE 864
+ + LK EEE L+ +E A E+++ I + + +L ELK + E
Sbjct: 791 EEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLE 850
Query: 865 KAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESL 924
K E + + + + LK + + D ++++ + KE E +
Sbjct: 851 KLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKD 910
Query: 925 RKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDE-------GLQKI 977
E K + E++ + EK + +E L
Sbjct: 911 NLLEEKENEIEERIAEEAIILLKYESEPEELLLEEADEKEKEEDNKEEEEERNKRLLLAK 970
Query: 978 AVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIE 1034
+ + ++ + LKKE L+ E+ L + + T Q +FLE+
Sbjct: 971 EELGNVNLMAIAEFEEKEERYNKDELKKERLEEEKKELLREIIEETCQRFKEFLELF 1027
Score = 47.7 bits (113), Expect = 6e-05
Identities = 114/881 (12%), Positives = 266/881 (30%), Gaps = 39/881 (4%)
Query: 858 KTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEA 917
E A L + +LK + L ++++ L E + L LK
Sbjct: 179 LIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEENLLYL--DYLKLN 236
Query: 918 ENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKI 977
E + L++ L D + + S E +K + + + K+ E EK+ Q + ++
Sbjct: 237 EERIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEELKLLAKEE 296
Query: 978 AVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEK 1037
E+ ++ K + + E +L EK +EK + E+EKE
Sbjct: 297 -------EELKSELLKLERRKVDDEEKLKESEKELKKL----EKELKKEKEEIEELEKEL 345
Query: 1038 YNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMN 1097
I + E K L+ + + E + +++ E E
Sbjct: 346 KELEIKREAEEEEEEQLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEE 405
Query: 1098 NRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIG 1157
LE +E + + + + EE + L + + + KL
Sbjct: 406 KEAKLLLELSEQEEDLLKEEKKEELKIVEELEESLETKQGKLTEEKEELEKQALKLLKDK 465
Query: 1158 STLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSDLE------------ 1205
L++ L ++ EL +R + + + +
Sbjct: 466 LELKKSEDLLKETKLVKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALIKDGVGLRI 525
Query: 1206 -----RYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSP-SRRYSPVRG 1259
R + + A + +V+ + +++D R P R +
Sbjct: 526 ISAAGRGGDLGVAVANYKVAISVAVIVEVSAVADEVDERQKLVRALTELPLPARTFVLLD 585
Query: 1260 GEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNK 1319
L + + + A +E + DD +A + +L+ K
Sbjct: 586 PLLKLPLKSIAVLEIDPALNLAQLNKATLEADEDDKRAKVVEGILKDTELTKLLESAKAK 645
Query: 1320 M---AQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEEL-QHLREKVLTLELT 1375
+ L E+ + TK Q ++E + + ++
Sbjct: 646 ESGLRKGVSLEEGLAEKSELKASLSELTKELLAEQELQEKAESELAKNEILRRQEEIKKK 705
Query: 1376 LSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRL 1435
+ EE + + + + +K + +L + + + E ++ L+ +++
Sbjct: 706 EQRIKEELKKLKLEKEELLADKVQEAQDKINEELKLLEQKIKEKEEEEEKSRLKKEEEEE 765
Query: 1436 QMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTL-ERASAGETELRGE 1494
+ + +E + + EE+ + + + L L E A E E
Sbjct: 766 EKSELSLKEKELAEEEEKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLI 825
Query: 1495 IQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNR 1554
Q + + + E+ K + E + + + + L E ++
Sbjct: 826 EQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKL 885
Query: 1555 LENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAA 1614
+ + + + K+E+++ S K + ++ + E++ +
Sbjct: 886 KDELESKEEKEKEEKKELEEESQKDNLLEEKENEIEERIAEEAIILLKYESEPEELLLEE 945
Query: 1615 NSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENL---H 1671
+ E E ++ + +N E + ++ K E L
Sbjct: 946 ADEKEKEEDNKEEEEERNKRLLLAKEELGNVNLMAIAEFEEKEERYNKDELKKERLEEEK 1005
Query: 1672 DKIQMLRDQLNSEIKRRQLYIYRDTRAGKEMQQLRQALGDS 1712
++ + + + L ++ G LG S
Sbjct: 1006 KELLREIIEETCQRFKEFLELFVSINRGLNKVFFYLELGGS 1046
Score = 47.3 bits (112), Expect = 8e-05
Identities = 120/856 (14%), Positives = 257/856 (30%), Gaps = 52/856 (6%)
Query: 54 RKKLEAYRTSQQQQAALVSKLQAKLLQYKQRCKELELEREAPSTSSYLGPLPSTPLPSAL 113
RKK E + ++ L + Q K E ++A L
Sbjct: 170 RKKKERLKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEENLLY 229
Query: 114 DAAQAHLREMREERIQDLNTALRRLDDERRE-----------NEKLRKMNSVYKEQLDEA 162
E + + L ++ ++E ++ ++ K Q +E
Sbjct: 230 LDYLKLNEERIDLLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEEL 289
Query: 163 HHT-----NEALTNDLEKLTTDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALWR 217
+ + + + KE +E+E E + L
Sbjct: 290 KLLAKEEEELKSELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELE 349
Query: 218 DVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVK 277
A + EQ ++ LS+ + E + +
Sbjct: 350 ------IKREAEEEEEEQLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNE 403
Query: 278 ENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQE 337
E E K + + + E + + E K++ + VEEL + + T + ++ E + + +
Sbjct: 404 EEKEAKLLLELSEQEEDLLKEEKKEELKIVEELEESLETKQGKLTEEKEELEKQALKLLK 463
Query: 338 LEL-LQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLAT 396
+L L+ + + + + A+ + + + +
Sbjct: 464 DKLELKKSEDLLKETKLVKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALIKDGVGL 523
Query: 397 HREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVE 456
A + +++ V E + K + L
Sbjct: 524 RIISAAGRGGDLGVAVANYKVAI---------SVAVIVEVSAVADEVDERQKLVRALTEL 574
Query: 457 KSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAR 516
L L + + L L + R
Sbjct: 575 PLPARTFVLLD----PLLKLPLKSIAVLEIDPALNLAQLNKATLEADEDDKRAKVVEGIL 630
Query: 517 EVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEM 576
+ K + + +E L L+ K L+ + E+ L ++ + E
Sbjct: 631 KDTELTKLLESAKAKESGLRKGVSLEEGLAEKSELKASLSELTKELLAEQELQEKAE--- 687
Query: 577 ERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSD 636
++ E K+ QR++E+L L+ +KE L A Q
Sbjct: 688 ---------SELAKNEILRRQEEIKKKEQRIKEELKKLKLEKEELLADKV----QEAQDK 734
Query: 637 VKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQI 696
+ +E E + ++E K ++ + +E E +E +E + + ++ + + +
Sbjct: 735 INEELKLLEQKIKEKEEEEEKSRLKKEEEEEEKSELSLKEKELAEEEEKTEKLKVEEEKE 794
Query: 697 SNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDC 756
LK Q EE E K + EE + EEK + E L +Q E+
Sbjct: 795 EKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAE 854
Query: 757 ELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELE 816
E + + ++ + E+ + D+ ++ ++++K + SQ LE
Sbjct: 855 EELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKDNLLE 914
Query: 817 EEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLK 876
E++ ++ E A + + L + K E+ K EE L +L
Sbjct: 915 EKENEIEERIAEEAIILLKYESEPEELLLEEADEKEKEEDNKEEEEERNKRLLLAKEELG 974
Query: 877 SEREALVTESEELKVQ 892
+ + E EE + +
Sbjct: 975 NVNLMAIAEFEEKEER 990
Score = 46.9 bits (111), Expect = 1e-04
Identities = 95/739 (12%), Positives = 249/739 (33%), Gaps = 21/739 (2%)
Query: 34 HLLRQNSDLQRKLDEESVINRKK---LEAYRTSQQQQAALVSKLQAKLLQYKQRCKELEL 90
L R+ D + KL E +K L+ + ++ + +L+ K ++ ++LE
Sbjct: 305 KLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEEEQLEK 364
Query: 91 EREAPSTSSYLGPLPSTPLPSALDAAQAHLREMREERIQDLNTALRRLDDERRENEKLRK 150
+E L +A E E + ++ A L+ +E + L++
Sbjct: 365 LQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEKEAKLLLELSEQEEDLLKE 424
Query: 151 MNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHA 210
+ ++E + E KLT + L ++ KD +E ++ +
Sbjct: 425 EKKEELKIVEELEESLET---KQGKLTEEKEELEKQALKLLKDKLELKK----------S 471
Query: 211 RLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNA 270
L +V + + + + + + + + A SA
Sbjct: 472 EDLLKETKLVKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALIKDGVGLRIISAAGR 531
Query: 271 EKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLL 330
D V + + + E +A+A+E ++++ V L + V L
Sbjct: 532 GGDLGVAVANYKVAISVAVIVEVSAVADEVDERQKLVRALTELPLPARTFVLLDPLLKLP 591
Query: 331 VEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRK 390
++ + L + +A ++ E + + + ++ RK
Sbjct: 592 LKSIAVLEIDPALNLAQLNKATLEADEDDKRAKVVEGILKDTELTKLLESAKAKESGLRK 651
Query: 391 ETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNI 450
L + +K + + S+L + + Q +K+
Sbjct: 652 GVSLEEGLAEKSELKASLSELTKELLAEQELQEKAESELAKNEILRRQEEIKKKEQRIKE 711
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRIN 510
E+ +++ E ++ E + +N L +++ + E + +K + E ++
Sbjct: 712 ELKKLKLEKEELLADKVQEAQDKINEELKLLEQKIKEKEEEEEKSRLKKEEEEEEKSELS 771
Query: 511 SDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG 570
E E + ++ + ++ + L +EL E+ + + L ++ K
Sbjct: 772 LKEKELAEEEEKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKI 831
Query: 571 DVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQS 630
E E L + + + E ++ + Q L+ ++ + + + +S
Sbjct: 832 KEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELES 891
Query: 631 -HLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASG-L 688
++ + KKE E ++ L++++ + + + + + ++ + L +
Sbjct: 892 KEEKEKEEKKELEEESQKDNLLEEKENEIEERIAEEAIILLKYESEPEELLLEEADEKEK 951
Query: 689 DADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECV---TKLTEEKEQVRAALEKKLHA 745
+ D + + K+ +L + + EE K +KE++ ++ L
Sbjct: 952 EEDNKEEEEERNKRLLLAKEELGNVNLMAIAEFEEKEERYNKDELKKERLEEEKKELLRE 1011
Query: 746 TVKQITEEKDCELSRLQAN 764
+++ + L +
Sbjct: 1012 IIEETCQRFKEFLELFVSI 1030
Score = 43.0 bits (101), Expect = 0.002
Identities = 96/680 (14%), Positives = 239/680 (35%), Gaps = 14/680 (2%)
Query: 519 ELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAE-ME 577
E ++ L E L + + AK A E + ++ + + E ++
Sbjct: 182 ETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEENLLYLDYLKLNEERID 241
Query: 578 RLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDV 637
L D E+I + +E ++ L ++ ++ +K+ E L E+
Sbjct: 242 LLQELLRDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEELKLLAKEEEELKS 301
Query: 638 KKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQIS 697
+ +LE + K + + ++ +L KEL+ ++ +E + L ++ + +
Sbjct: 302 ELLKLERRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKEL-KELEIKREAEEEEEE 360
Query: 698 NLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCE 757
L+K E+ E K ++E + ++E++ E++ A + E++ +
Sbjct: 361 QLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEKEAKLLLELSEQEED 420
Query: 758 LSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEE 817
L + + + + + L E ++ + + K + +LKE +
Sbjct: 421 LLKEEKKEELKIVEELEESLETKQGKLTEEKEELEKQALKLLKDKLELKKSEDLLKETKL 480
Query: 818 EKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKS 877
K + E+ + RE L +A +++ A + +
Sbjct: 481 VKLLEQLELLLLRQKLEEASQKESKAREGLAVLLALIKDGVGLRIISAAGRGGDLGVAVA 540
Query: 878 ERE-----ALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDL-LDT 931
+ A++ E + ++ + V + L + + L+ L+
Sbjct: 541 NYKVAISVAVIVEVSAVADEVDERQKLVRALTELPLPARTFVLLDPLLKLPLKSIAVLEI 600
Query: 932 KTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRN 991
L + K D R V + + + + ++ K + +
Sbjct: 601 DPALNLAQLNKATLEADEDDKRAKVVEGILKDTELTKLLESAKAKESGLRKGVSLEEGLA 660
Query: 992 QLNDQSNDVASLKKELLQAEQ----IRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLC 1047
+ ++ ++ L KELL ++ +L ++ +++ + ++ K L
Sbjct: 661 EKSELKASLSELTKELLAEQELQEKAESELAKNEILRRQEEIKKKEQRIKEELKKLKLE- 719
Query: 1048 LFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDL 1107
++ + Q +D+ + +L + K++ E+ +RLK++ E+ + + +
Sbjct: 720 KEELLADKVQEAQDKINEELKLLEQKIKEKEEEEEKSRLKKEEEEEEKSELSLKEKELAE 779
Query: 1108 VKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALR 1167
+E EK V + +L A+E + L+ EA + E L ++
Sbjct: 780 EEEKTEKLKVEEEKEEKL-KAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEE 838
Query: 1168 YHAFYTLSEKEAELARIRAQ 1187
+K +LA +
Sbjct: 839 LALELKEEQKLEKLAEEELE 858
>gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups.
Length = 977
Score = 48.7 bits (116), Expect = 3e-05
Identities = 69/293 (23%), Positives = 126/293 (43%), Gaps = 29/293 (9%)
Query: 1293 DDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQT----KAAA 1348
+DL M Q ++ I L+ A Q + + ALQ + LE +LS+T K AA
Sbjct: 131 EDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAA 190
Query: 1349 NSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQ 1408
+ + E+L+ LR ++L T S+ D L +E L + + L+
Sbjct: 191 QEKIHV-EILEEQLEKLRNELLIRGATEGLCVHSLSKELDVL---KEENMLLKDDIQFLK 246
Query: 1409 DELS---RTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEE 1465
EL TE RV KLE +R L+ + L+ + ++ KL E
Sbjct: 247 AELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSP------LQYDCWWE 300
Query: 1466 RCTSLKTTIDQLNLTLERASA---GETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKL 1522
+ +L+ +D+ +E+A+ +LR ++ L+ +L + ++ S+ + K++ LQ+
Sbjct: 301 KVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANV-SKFSSYKVELLQQK 359
Query: 1523 LHSAENEKRVLQERLDTCQASL-AELRRQQVNRLENQDDLKAMTQALKREIKD 1574
L E ERL + + ++ Q + E QD L + + K+ +
Sbjct: 360 LKLLE-------ERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSLE 405
Score = 32.6 bits (74), Expect = 2.5
Identities = 48/233 (20%), Positives = 100/233 (42%), Gaps = 35/233 (15%)
Query: 529 RLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIE-------KSKGDVEAEMERLLL 581
L + L A EDL+ KE L+ ++ L+ + + K VE E+L
Sbjct: 146 LLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEK 205
Query: 582 DRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILF---DTQSHLEQSDVK 638
R+++ + + + + + KEL L+E+ L+ D + L+A L +T+ + + + +
Sbjct: 206 LRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKE 265
Query: 639 KEQLEHEVQEL---------------LVKQESLKGQVVRLNKELEDTEKRAQETKASLVQ 683
+ L+ ++EL ++ + +V L L+ + ++ L Q
Sbjct: 266 RSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEKAALVLDQ 325
Query: 684 QASGLDADYQNQISNLKKQNEEC-VTKLTEEKINLKKQNEECVTKLTEEKEQV 735
+ D ++++ L+ +E V+K + K+ L +Q KL EE+ Q
Sbjct: 326 -----NQDLRDKVDKLEASLKEANVSKFSSYKVELLQQK----LKLLEERLQA 369
Score = 31.0 bits (70), Expect = 8.3
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 984 DEKQALRNQLNDQSNDVASLKKELLQAEQIRL----DLD---SEKVTLQEKCKFLEIEKE 1036
D +Q QL D + + +K +L Q RL DL+ +EK LQ K LE+
Sbjct: 121 DGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLS 180
Query: 1037 KYNFVISYLL-CLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVE 1095
+ + I VE+ Q+ K R++L + + ++ ++L LK E+++
Sbjct: 181 ETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLK---EENML 237
Query: 1096 MNNRVNKNLEDL--VKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKL 1153
+ + + +L V E EE+ L E+ R+ L+AS +++E K
Sbjct: 238 LKDDIQFLKAELIEVAETEERVFKL-----------EKERSL------LDASLRELESKF 280
Query: 1154 SSIGSTLRRIAALRYHAFY 1172
+ +++ L+Y ++
Sbjct: 281 IVAQEDVSKLSPLQYDCWW 299
Score = 30.6 bits (69), Expect = 8.9
Identities = 69/326 (21%), Positives = 128/326 (39%), Gaps = 73/326 (22%)
Query: 308 EELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAP 367
E L +I+ LE R+ E D + L + + +E+L+ L + ++
Sbjct: 166 EALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLI------------- 212
Query: 368 LKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTS 427
+ AT +H++ K+ + E NM L
Sbjct: 213 -------------------------RGATEGLCVHSLSKELDVLKEE--NM-----LLKD 240
Query: 428 QLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSR 487
+ KA+L +V +E + L E+S L+ + RE L S Q++ S+
Sbjct: 241 DIQFLKAELIEVAETEERVF----KLEKERSLLDASLRE-------LESKFIVAQEDVSK 289
Query: 488 LSKINESLQSEKL-FLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKL 546
LS + EK+ LQ+ LDR + ++ + L D N+ LR+ + LK A +
Sbjct: 290 LSPLQYDCWWEKVENLQDLLDRATNQVEKAALVL----DQNQDLRDKVDKLEASLKEANV 345
Query: 547 AKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQR 606
+K + E +Q L +E ERL +++ I Y+ +I+ L +
Sbjct: 346 SKFSSYK-VELLQQKLKLLE----------ERLQASDHEIHSYIQLYQESIKEFQDTLSK 394
Query: 607 LQEQLASLRSDKESLEAILFDTQSHL 632
L+E+ + RS + + + + S +
Sbjct: 395 LKEE-SKKRSLEHPADDMPSEFWSRI 419
Score = 30.6 bits (69), Expect = 9.1
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Query: 1559 DDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQN 1618
+DL M Q ++ I L+ A Q + + ALQ + LE +LS+T +++
Sbjct: 131 EDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSET----DARI 186
Query: 1619 ELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLR 1678
+L +E + + + + L +E L+ + L D IQ L+
Sbjct: 187 KLAAQEKIHVEILEEQLEKLRNELLIRGATEGLCVHSLSKELDVLKEENMLLKDDIQFLK 246
Query: 1679 DQLNS 1683
+L
Sbjct: 247 AELIE 251
>gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail. The myosin molecule is a
multi-subunit complex made up of two heavy chains and
four light chains it is a fundamental contractile
protein found in all eukaryote cell types. This family
consists of the coiled-coil myosin heavy chain tail
region. The coiled-coil is composed of the tail from two
molecules of myosin. These can then assemble into the
macromolecular thick filament. The coiled-coil region
provides the structural backbone the thick filament.
Length = 859
Score = 48.5 bits (116), Expect = 4e-05
Identities = 128/570 (22%), Positives = 231/570 (40%), Gaps = 49/570 (8%)
Query: 425 LTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKN 484
L Q + + QL + E L +E + + L+K +E+ + L L+ +
Sbjct: 2 LERQKRELENQLYRKESELSQLSSKLEDEQALVAQLQKKIKELEARIRELEEELEAERAA 61
Query: 485 NSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMN----RRLREDLLIANED 540
++ K L E L L+ A ++EL K + R+ E+ + +E+
Sbjct: 62 RAKAEKARADLSRELEELSERLEEAG-GATAAQIELNKKREAELAKLRKDLEEANLQHEE 120
Query: 541 L------KNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYE 594
K+ EL EQ E++Q A EK K ++AE++ LL + + E
Sbjct: 121 ALATLRKKHQDAINELSEQ-IEQLQKQKAKAEKEKSQLQAEVDDLLAQLDQIAKAKLNAE 179
Query: 595 ITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQE 654
+ + +L LQ +L L+ L + QS + E+ E +V L +
Sbjct: 180 KKAKQLESQLSELQVKLDELQRQLNDLTSQKSRLQSENSDLTRQLEEAEAQVSNLSKLKS 239
Query: 655 SLKGQVVRLNKELEDTEKRAQETKASLVQQASGLD-------------ADYQNQISNLKK 701
L+ Q+ + LE+ + +A L Q LD A+ + Q+S
Sbjct: 240 QLESQLEEAKRSLEEESRERANLQAQLRQLEHDLDSLREQLEEESEAKAELERQLSKANA 299
Query: 702 QNEECVTKLTEEKINLKKQNEEC----VTKLTEEKEQVRAALEK--KLHATVKQITEEKD 755
+ ++ +K E ++ EE K++E +E AA K L T ++ E +
Sbjct: 300 EIQQWRSKFESEGALRAEELEELKKKLNQKISELEEAAEAANAKCDSLEKTKSRLQSELE 359
Query: 756 ---CELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVL 812
EL R A +L+ K + R + Q L AQ++ + + L ++
Sbjct: 360 DLQIELERANAAASELE-KKQKNFDKILAEWKRKVDELQAELDTAQREARNLSTELFRLK 418
Query: 813 KELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKI 872
ELEE K ++ ++RE+ ++ + + L E R V +LE+ + R E EK L+ +
Sbjct: 419 NELEELKDQVEALRRENKNLQDEIHDLTDQLGE-GGRNVHELEKARRRLEAEKDELQAAL 477
Query: 873 SDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTK 932
+ ++ E ES+ L+ Q+ LS+ + E RRL E E E+ RK+
Sbjct: 478 EEAEAALEL--EESKVLRAQVELSQIRS--------EIERRLAEKEEEFENTRKNHQRA- 526
Query: 933 THLADSNFEKDKYAKSNKDLREMVKKVESE 962
+ + AK + + KK+E +
Sbjct: 527 --IESLQATLEAEAKGKAEASRLKKKLEGD 554
Score = 41.2 bits (97), Expect = 0.006
Identities = 142/667 (21%), Positives = 294/667 (44%), Gaps = 53/667 (7%)
Query: 269 NAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNV 328
+ D+L ++ ++L SQ + L+SEN+ + + ++ E +V L K LE+++EEA +
Sbjct: 193 QVKLDELQRQLNDLTSQKSRLQSENSDLTRQLEEAEAQVSNLSKLKSQLESQLEEAKR-- 250
Query: 329 LLVEEMQQELELLQNTLRDIAR--AVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSV 386
+EE +E LQ LR + +++ ++ ++ ++ + +A
Sbjct: 251 -SLEEESRERANLQAQLRQLEHDLDSLREQLEEESEAKAELERQLSKANAEIQQWRS--- 306
Query: 387 TFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEAL 446
+ E++ A E+L +KK+ ++ + L++TK++L E E L
Sbjct: 307 --KFESEGALRAEELEELKKKLNQKISELEEAAEAANAKCDSLEKTKSRLQS---ELEDL 361
Query: 447 VKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNEL 506
+E S LEK ++ ++++ +D++Q + +L +E L+NEL
Sbjct: 362 QIELERANAAASELEKKQKNFDKILAEWKRKVDELQAELDTAQREARNLSTELFRLKNEL 421
Query: 507 DRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIE 566
+ + ++A E + +D L + L ++ + A+ LE K+E+Q L E
Sbjct: 422 EELKDQVEALRRENKNLQDEIHDLTDQLGEGGRNVHELEKARRRLEAEKDELQAALEEAE 481
Query: 567 KSKGDVEAEMERLLLD----RSDMNEQISKYEITIEANDKELQR----LQEQLASLRSDK 618
+ E+++ R ++ RS++ ++++ E E K QR LQ L + K
Sbjct: 482 AALELEESKVLRAQVELSQIRSEIERRLAEKEEEFENTRKNHQRAIESLQATLEAEAKGK 541
Query: 619 ESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETK 678
+ + + + ++ + E + + QV L ++E+ ++ ++ +
Sbjct: 542 AEASRLKKKLEGDINELEIALDHANKANAEAQKNVKKYQQQVKELQTQVEEEQRAREDAR 601
Query: 679 ASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAA 738
L A + + + L+ + EE + L E+ +KQ E T+L E E+V
Sbjct: 602 EQL--------AVAERRATALEAELEELRSAL-EQAERARKQAE---TELAEASERV--- 646
Query: 739 LEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQ 798
+L A + +K +L+ L LQS +D+ + + A RA+ + A +A+
Sbjct: 647 --NELTAQNSSLIAQK----RKLEGELAALQSDLDEAVNELKAAEERAKKAQADAARLAE 700
Query: 799 Q--DQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEE 856
+ ++ L ++ K+LE + +K E + + ++ + + A++ E
Sbjct: 701 ELRQEQEHSQHLERLRKQLESQ------VKELQVRLDEAEAAALKGGKKMIQKLEARVRE 754
Query: 857 LKTRTEEEKAILERKISDL-KSERE--ALVTESEELKVQLHLSEDKVDTVQAQLLETARR 913
L+ + E+ +L K ER L + EE K L +D VD +QA++ R+
Sbjct: 755 LEAELDGEQRRHAETQKNLRKMERRVKELQFQVEEDKKNLERLQDLVDKLQAKIKTYKRQ 814
Query: 914 LKEAENV 920
L+EAE V
Sbjct: 815 LEEAEEV 821
Score = 40.0 bits (94), Expect = 0.014
Identities = 85/472 (18%), Positives = 192/472 (40%), Gaps = 38/472 (8%)
Query: 418 MSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSN 477
+ ++ + + +L ++ E E L +E LR E L+ ++ + + N
Sbjct: 396 LQAELDTAQREARNLSTELFRLKNELEELKDQVEALRRENKNLQDEIHDLTDQLGEGGRN 455
Query: 478 LDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRG-KEDMNRRLREDLLI 536
+ +++K RL + LQ+ + L+ S + +VEL + ++ RRL E
Sbjct: 456 VHELEKARRRLEAEKDELQAALEEAEAALELEESKVLRAQVELSQIRSEIERRLAEK--- 512
Query: 537 ANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEIT 596
E+ +N + + ++ E +Q L K K + ++L D +++ +
Sbjct: 513 -EEEFENTR---KNHQRAIESLQATLEAEAKGKAEASRLKKKLEGDINELEIALDHANKA 568
Query: 597 IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESL 656
K +++ Q+Q+ L++ E + D + L ++ + LE E++EL E
Sbjct: 569 NAEAQKNVKKYQQQVKELQTQVEEEQRAREDAREQLAVAERRATALEAELEELRSALEQA 628
Query: 657 KGQVVRLNKELEDTEKRAQETKA---SLVQQASGLDADYQNQISNLKKQNEECVTKLTEE 713
+ + EL + +R E A SL+ Q L+ + S+L +E
Sbjct: 629 ERARKQAETELAEASERVNELTAQNSSLIAQKRKLEGELAALQSDL------------DE 676
Query: 714 KINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHID 773
+N K EE K + ++ L ++ + K QL+S +
Sbjct: 677 AVNELKAAEERAKKAQADAARLAEELRQEQEHSQHLERLRK------------QLESQVK 724
Query: 774 KICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTL---DRIKRESA 830
++ + ++A A ++ + + + ++ L + E + L +R +E
Sbjct: 725 ELQVRLDEAEAAALKGGKKMIQKLEARVRELEAELDGEQRRHAETQKNLRKMERRVKELQ 784
Query: 831 GRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREAL 882
+ E+D+ + L++ +++ AK++ K + EE + + + +S + + L
Sbjct: 785 FQVEEDKKNLERLQDLVDKLQAKIKTYKRQLEEAEEVAQINLSKYRKAQREL 836
Score = 34.2 bits (79), Expect = 0.72
Identities = 70/348 (20%), Positives = 146/348 (41%), Gaps = 15/348 (4%)
Query: 1281 LMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETK 1340
L +Q+ Q+++++ + L+ E+ DL Q + A++ + L+ + L+ K
Sbjct: 136 LSEQIEQLQKQKAKAEKEKSQLQAEVDDLLAQLDQIAKAKLNAEKKAKQLESQLSELQVK 195
Query: 1341 LSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARL 1400
L + + N + + E L ++ E +SN+S+ KSQ + +L + + S
Sbjct: 196 LDELQRQLNDLTSQKSRLQSENSDLTRQLEEAEAQVSNLSKLKSQLESQLEEAKRSLEEE 255
Query: 1401 DAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNI 1460
E+ LQ +L + E + L Q + L+ L + + + + + E +
Sbjct: 256 SRERANLQAQLRQLEHDLDSLREQLEEESEAKAELERQLSKANAEIQQWRSKFESEGALR 315
Query: 1461 TG--------LEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSN 1512
L ++ + L+ + N + ++ L+ E++ LQ L + +
Sbjct: 316 AEELEELKKKLNQKISELEEAAEAANAKCDSLEKTKSRLQSELEDLQIELERANAAASEL 375
Query: 1513 CEKLKQLQKLLHSAENEKRVLQERLDTCQ-------ASLAELRRQQVNRLENQDDLKAMT 1565
+K K K+L + + LQ LDT Q L L+ + + + L+
Sbjct: 376 EKKQKNFDKILAEWKRKVDELQAELDTAQREARNLSTELFRLKNELEELKDQVEALRREN 435
Query: 1566 QALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAA 1613
+ L+ EI DL+D + + + ++ R L+ EK L+ L + +AA
Sbjct: 436 KNLQDEIHDLTDQLGEGGRNVHELEKARRRLEAEKDELQAALEEAEAA 483
Score = 33.5 bits (77), Expect = 1.5
Identities = 163/744 (21%), Positives = 296/744 (39%), Gaps = 123/744 (16%)
Query: 852 AKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQ------- 904
++L EL+ + +E L+R+++DL S++ L +E+ +L QL +E +V +
Sbjct: 187 SQLSELQVKLDE----LQRQLNDLTSQKSRLQSENSDLTRQLEEAEAQVSNLSKLKSQLE 242
Query: 905 AQLLETARRLKEA-------ENVGESLRKDLLDTKTHLADSNFEKDKY----AKSNKDLR 953
+QL E R L+E + L DL + L + + K + +K+N +++
Sbjct: 243 SQLEEAKRSLEEESRERANLQAQLRQLEHDLDSLREQLEEESEAKAELERQLSKANAEIQ 302
Query: 954 EMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQI 1013
+ K ESE +A ++E +K+ + + E+ A D K LQ+E
Sbjct: 303 QWRSKFESEGALRAEELEELKKKLNQKISELEEAAEAAN---AKCDSLEKTKSRLQSELE 359
Query: 1014 RLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQ 1073
L ++ E+ E+EK++ NF + L++ + +L +L Q
Sbjct: 360 DLQIELERANA----AASELEKKQKNF-----------DKILAEWKRKVDELQAELDTAQ 404
Query: 1074 RKKENVVEDLARLKQKYEQSVEMNN---RVNKNLEDLVKECEEKEVVLLDLCARLGGAEE 1130
R+ N+ +L RLK + E+ + R NKNL+D + DL +LG
Sbjct: 405 REARNLSTELFRLKNELEELKDQVEALRRENKNLQDEIH----------DLTDQLGEGGR 454
Query: 1131 RVRASSAHLLQLEASKKDVEHKLSSIGSTLR-----------RIAALRYHAFYTLSEKEA 1179
V +LEA K +++ L + L ++ +R L+EKE
Sbjct: 455 NVHELEKARRRLEAEKDELQAALEEAEAALELEESKVLRAQVELSQIRSEIERRLAEKEE 514
Query: 1180 ELARIRAQYDAYKSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGR 1239
E R H L+ A+ ++ +K +N LE LD
Sbjct: 515 EFENTRKN---------HQRAIESLQATLEAEAKGKAEASRLKKKLEGDINELEIALDH- 564
Query: 1240 ASHAGGKMTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMT 1299
A+ A + ++Y + V+ L QV + +R R+D +
Sbjct: 565 ANKANAEAQKNVKKYQ--------------------QQVKELQTQVEEEQRAREDAREQL 604
Query: 1300 QALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKN 1359
+R L + + + QA++ + + E ++++ A +S +
Sbjct: 605 AVAERRATALEAELEELRSALEQAERARKQAETELAEASERVNELTAQNSSLIAQKRK-- 662
Query: 1360 EELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVT 1419
L ++ L+ L E +++ K + ARL E R Q+ E
Sbjct: 663 -----LEGELAALQSDLDEAVNELKAAEERAKKAQADAARLAEELRQEQEHSQHLERLRK 717
Query: 1420 KLELQ------------RVALEGDQ---QRLQMLLQEKETNLHKLQERCEHQCRNITGLE 1464
+LE Q AL+G + Q+L+ ++E E L Q R +N+ +E
Sbjct: 718 QLESQVKELQVRLDEAEAAALKGGKKMIQKLEARVRELEAELDGEQRRHAETQKNLRKME 777
Query: 1465 ERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLH 1524
R L+ +++ LER +L+ +I+T +R L + +Q N K ++ Q+ L
Sbjct: 778 RRVKELQFQVEEDKKNLERLQDLVDKLQAKIKTYKRQLEEAEEVAQINLSKYRKAQRELE 837
Query: 1525 SAENEKRVLQERLDTCQASLAELR 1548
AE ER DT + SL +LR
Sbjct: 838 DAE-------ERADTAERSLNKLR 854
>gnl|CDD|116500 pfam07888, CALCOCO1, Calcium binding and coiled-coil domain
(CALCOCO1) like. Proteins found in this family are
similar to the coiled-coil transcriptional coactivator
protein coexpressed by Mus musculus (CoCoA/CALCOCO1).
This protein binds to a highly conserved N-terminal
domain of p160 coactivators, such as GRIP1, and thus
enhances transcriptional activation by a number of
nuclear receptors. CALCOCO1 has a central coiled-coil
region with three leucine zipper motifs, which is
required for its interaction with GRIP1 and may regulate
the autonomous transcriptional activation activity of the
C-terminal region.
Length = 546
Score = 48.1 bits (114), Expect = 4e-05
Identities = 67/324 (20%), Positives = 140/324 (43%), Gaps = 27/324 (8%)
Query: 1281 LMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETK 1340
L Q+ +RER+DL AL+ ++ D+ +++ Q + +R E+ LE +
Sbjct: 141 LQNQLEGCQRERNDLMKKFLALEGDVSDMR-------SRIEQLETALRHSTEKTEELEEQ 193
Query: 1341 LSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARL 1400
+ ++++ S S + + ++++L LE + ++++K + D L ++ A L
Sbjct: 194 HKEAQSSSESMSAERNALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAEL 253
Query: 1401 DAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNI 1460
+ K L+ R+ K+ +QR E ++ LQ+ ++ +L LQER E +
Sbjct: 254 ERMKGELKQ-------RLKKMTIQRRDEETERIDLQLENEQLHEDLRTLQERLESSQQKA 306
Query: 1461 TGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQ 1520
L E SL + D L ++ ++ ++ L L + + ++ +
Sbjct: 307 GLLGEELASLGSLRDHTIAELHQSRLESAQMSLQLSQLNLAL------KEGQSQWAQERE 360
Query: 1521 KLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHT 1580
L SAE +K D Q AEL + + E + + + L E +
Sbjct: 361 TLRQSAEADK-------DRIQKLSAELLKLEEWLQEERSQREKLEVELGIEKDCNRVQLS 413
Query: 1581 QESNKMAQAQQTMRALQEEKYALE 1604
+ ++++ + +R LQ+EK L+
Sbjct: 414 ENRRELSELRSALRVLQKEKEQLQ 437
Score = 47.3 bits (112), Expect = 6e-05
Identities = 61/307 (19%), Positives = 131/307 (42%), Gaps = 25/307 (8%)
Query: 1407 LQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEER 1466
LQ++L + L + +ALEGD ++ +++ ET L E+ E LEE+
Sbjct: 141 LQNQLEGCQRERNDLMKKFLALEGDVSDMRSRIEQLETALRHSTEKTEE-------LEEQ 193
Query: 1467 CTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSA 1526
+++ + ++ A E + I L++++ + Q N L+ Q +
Sbjct: 194 HKEAQSSSESMSAERNALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAEL 253
Query: 1527 ENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKM 1586
E K L++RL + + R ++ R++ Q + + + + L R +++ ++ Q++ +
Sbjct: 254 ERMKGELKQRL---KKMTIQRRDEETERIDLQLENEQLHEDL-RTLQERLESSQQKAGLL 309
Query: 1587 AQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQLRMSQWPSESPM- 1645
+ ++ +L++ A + A + Q +++ L + SQW E
Sbjct: 310 GEELASLGSLRDHTIAELHQSRLESAQMSLQ-------LSQLNLALKEGQSQWAQERETL 362
Query: 1646 ---NGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLYIYRDTRAGKEM 1702
D + I KL E +L L+ + + L +L E ++ + + R E+
Sbjct: 363 RQSAEADKDRIQKLSAELLKLEEWLQEERSQREKLEVELGIEKDCNRVQLSENRR---EL 419
Query: 1703 QQLRQAL 1709
+LR AL
Sbjct: 420 SELRSAL 426
Score = 39.2 bits (91), Expect = 0.021
Identities = 62/301 (20%), Positives = 130/301 (43%), Gaps = 41/301 (13%)
Query: 271 EKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLL 330
+ ++L +++ E +S + +E NA+ + + ++R+ EL + I TL + +E D+ +
Sbjct: 186 KTEELEEQHKEAQSSSESMSAERNALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEG 245
Query: 331 VEEMQQELELLQNTLRDIAR---AVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVT 387
++++ ELE ++ L+ + +D E + I
Sbjct: 246 TQDIEAELERMKGELKQRLKKMTIQRRDEETERI-------------------------- 279
Query: 388 FRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALV 447
+ + E L T++++ ES+ + + +++ SL S D T A+L Q E +
Sbjct: 280 -DLQLENEQLHEDLRTLQERLESSQQKAGLLGEELASLGSLRDHTIAELHQSRLESAQMS 338
Query: 448 KNIEMLRVE-KSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNEL 506
+ L + K + +E + +S ++ D++QK ++ L K+ E LQ E+ +
Sbjct: 339 LQLSQLNLALKEGQSQWAQERETLRQSAEADKDRIQKLSAELLKLEEWLQEERSQREKLE 398
Query: 507 DRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIE 566
+ + D V+L LR L ++ ++ EQ +EE Q LL +I
Sbjct: 399 VELGIEKDCNRVQLSENRRELSELRSAL----------RVLQKEKEQLQEEKQELLDYIR 448
Query: 567 K 567
Sbjct: 449 V 449
Score = 35.4 bits (81), Expect = 0.35
Identities = 46/293 (15%), Positives = 120/293 (40%), Gaps = 13/293 (4%)
Query: 398 REQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEK 457
+ + + + K++ + + +M ++ L + L + + ++ + + + E + E+
Sbjct: 149 QRERNDLMKKFLALEGDVSDMRSRIEQLETALRHSTEKTEELEEQHKEAQSSSESMSAER 208
Query: 458 SALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDARE 517
+AL + E + + L ++ + + ++ E Q + L+ + +
Sbjct: 209 NALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEAELERMKGELKQRLKKMT 268
Query: 518 VELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEME 577
++ R +E L+ + +EDL+ + E +Q + LA + + AE+
Sbjct: 269 IQRRDEETERIDLQLENEQLHEDLRTLQERLESSQQKAGLLGEELASLGSLRDHTIAELH 328
Query: 578 RLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDV 637
+ L+ + M+ Q+S+ + L+E + ++E+L + +++
Sbjct: 329 QSRLESAQMSLQLSQLNL----------ALKEGQSQWAQERETLRQSAEADKDRIQKLSA 378
Query: 638 KKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDA 690
+ +LE +QE ++E L+ V L E + + E + L + S L
Sbjct: 379 ELLKLEEWLQEERSQREKLE---VELGIEKDCNRVQLSENRRELSELRSALRV 428
Score = 33.0 bits (75), Expect = 1.8
Identities = 59/311 (18%), Positives = 114/311 (36%), Gaps = 51/311 (16%)
Query: 16 RDYEDTPLGSTSHGVDSSHLLRQNSDLQRKL----DEESVINRKKLEAYRTSQQQQAALV 71
+++ S S + + LL Q ++ Q+++ + + +KK E R + Q
Sbjct: 192 EQHKEAQSSSESMSAERNALLAQRAENQQRILELEQDIQTLTQKKQENDRVLEGTQDIEA 251
Query: 72 SKLQAKLLQYKQRCKELELEREAPSTSSYLGPLPSTPLPSALDAAQAHLREMREERIQDL 131
+ K + KQR K++ ++R T L + L L Q L E Q
Sbjct: 252 ELERMKG-ELKQRLKKMTIQRRDEETERIDLQLENEQLHEDLRTLQERL-----ESSQQK 305
Query: 132 NTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKE 191
L E+L + S+ + E H + +L+ L+E +
Sbjct: 306 AGLLG---------EELASLGSLRDHTIAELHQSRLESAQMSLQLSQLNLALKEGQSQ-- 354
Query: 192 KDWIEEEQYFNDYYSSEHARLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQM 251
W +E + ++ R+ L +++ ++ +S E K+ +L
Sbjct: 355 --WAQERETLRQSAEADKDRIQKLSAELLKLEEWLQEERSQRE----KLEVELGI----- 403
Query: 252 SGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELL 311
EKD + SE + +++ L+S + E +Q +E +ELL
Sbjct: 404 -------------------EKDCNRVQLSENRRELSELRSALRVLQKEKEQLQEEKQELL 444
Query: 312 KRIHTLEARVE 322
I LE R++
Sbjct: 445 DYIRVLELRLD 455
Score = 31.1 bits (70), Expect = 6.6
Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 1292 RDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQ 1351
++L ++ I +L + + + Q Q AL+E + ++ +Q +
Sbjct: 310 GEELASLGSLRDHTIAELHQSRLESAQMSLQLSQLNLALKEGQ----SQWAQERETLRQS 365
Query: 1352 SEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDEL 1411
+EA + +Q L ++L LE + EE+SQ + ++ L EK + +L
Sbjct: 366 AEA---DKDRIQKLSAELLKLE---EWLQEERSQ--REKLEVE-----LGIEKDCNRVQL 412
Query: 1412 SRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCE 1454
S +++L L+ ++++LQ QE + L+ R +
Sbjct: 413 SENRRELSELRSALRVLQKEKEQLQEEKQELLDYIRVLELRLD 455
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated.
Length = 646
Score = 48.4 bits (116), Expect = 4e-05
Identities = 42/246 (17%), Positives = 96/246 (39%), Gaps = 40/246 (16%)
Query: 875 LKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTH 934
LKS ++ ++ EL V +H+ + K + +L + L + + LR L K +
Sbjct: 14 LKSYKDEVLEALHELGV-VHIEDLKEELSNERLRKLRSLLTKLSEALDKLRSYL--PKLN 70
Query: 935 LADSNFEKDKYAKSN---KDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRN 991
+K KD+ E ++K+E E ++ I E L ++E + L
Sbjct: 71 PLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISE-L--------ENEIKELEQ 121
Query: 992 QLN------DQSNDVASLK-KELLQAEQIRLDLDSEKVTLQEKCK-FLEIEKEKYNFVIS 1043
++ + D++ L + + + D + E +E +V
Sbjct: 122 EIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYVYV 181
Query: 1044 YLLCLFQVEVELSQVTKD-----------------RSDLSHQLSLLQRKKENVVEDLARL 1086
++ L ++ E+ + K ++ +L +++++E+++E+L L
Sbjct: 182 VVVVLKELSDEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERESLLEELKEL 241
Query: 1087 KQKYEQ 1092
+KY +
Sbjct: 242 AKKYLE 247
Score = 48.0 bits (115), Expect = 4e-05
Identities = 45/252 (17%), Positives = 104/252 (41%), Gaps = 39/252 (15%)
Query: 421 QVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDK 480
++ L S L + L ++ L + + + + + + E+++ + L+K
Sbjct: 44 RLRKLRSLLTKLSEALDKLRSYLPKLNP------LREEKKKVSVKSLEELIKDVEEELEK 97
Query: 481 VQKN-NSRLSKINESLQSEKLFLQNELDRIN--SDMDAREVELRGKEDMNRRL------R 531
++K +I+E L++E L+ E++R+ + D L G + ++ + +
Sbjct: 98 IEKEIKELEEEISE-LENEIKELEQEIERLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDK 156
Query: 532 EDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMN---- 587
+ L D++N E + +K + ++ +++ +VE E+++L +R ++
Sbjct: 157 LEELKLESDVENV----EYISTDKGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEGT 212
Query: 588 --EQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHE 645
E I + + +E +KE + L E+L L L E LE E
Sbjct: 213 PSELIREIKEELEEIEKERESLLEELKELAKKYLEELLAL-------------YEYLEIE 259
Query: 646 VQELLVKQESLK 657
++ + LK
Sbjct: 260 LERAEALSKFLK 271
Score = 39.9 bits (94), Expect = 0.014
Identities = 44/247 (17%), Positives = 96/247 (38%), Gaps = 38/247 (15%)
Query: 806 DRLSQVLKELEEEKCTLDRIKRES-------AGRSEQDRNTINTLREQLNRTVAKLEELK 858
+RL ++ L + LD+++ + + ++ L + + + K+E+
Sbjct: 43 ERLRKLRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVEEELEKIEK-- 100
Query: 859 TRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAE 918
+E LE +IS+L++E + L E E L+ + D L K
Sbjct: 101 -EIKE----LEEEISELENEIKELEQEIERLEPWGNFDLD---------LSLLLGFKYVS 146
Query: 919 NVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTI--DEGLQK 976
++ +D L+ +S+ E +Y ++K +V V E D+ G ++
Sbjct: 147 VFVGTVPEDKLEEL--KLESDVENVEYISTDKGYVYVVVVVLKELSDEVEEELKKLGFER 204
Query: 977 IAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKF----LE 1032
+ + + +R ++ ++ + ++KE E + +L E+ LE
Sbjct: 205 LELEEEGTPSELIR-EIKEE---LEEIEKER---ESLLEELKELAKKYLEELLALYEYLE 257
Query: 1033 IEKEKYN 1039
IE E+
Sbjct: 258 IELERAE 264
Score = 33.7 bits (78), Expect = 0.98
Identities = 54/321 (16%), Positives = 119/321 (37%), Gaps = 53/321 (16%)
Query: 611 LASLRSDKESLEAILFDTQS-HLEQSDVKKEQLEHE-VQELLVKQESLKGQVVRLNKELE 668
+ +L+S K+ + L + H+E KE+L +E +++L L + +L L
Sbjct: 11 IVTLKSYKDEVLEALHELGVVHIED---LKEELSNERLRKLRSLLTKLSEALDKLRSYLP 67
Query: 669 ----DTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNE-- 722
E++ + + SL + ++ + + +K+ EE +++L E L+++ E
Sbjct: 68 KLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEE-ISELENEIKELEQEIERL 126
Query: 723 ECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDA 782
E + + K + V + E+K EL
Sbjct: 127 EPWGNFDLDLSLLLG--FKYVSVFVGTVPEDKLEELKL--------------ESDVENVE 170
Query: 783 LLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELE------EEKCTLDRIKRESAGRSEQD 836
+ + +++ ++ D + + LK+L EE+ T + RE
Sbjct: 171 YISTDKGYVYVVVVVLKELS---DEVEEELKKLGFERLELEEEGTPSELIREIKEE---- 223
Query: 837 RNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELK----VQ 892
+ + ++ + +L+EL + EE L + E E S+ LK
Sbjct: 224 ---LEEIEKERESLLEELKELAKKYLEELLALYEYLE---IELERAEALSKFLKTDKTFA 277
Query: 893 LH--LSEDKVDTVQAQLLETA 911
+ + ED+V ++ + +
Sbjct: 278 IEGWVPEDRVKKLKELIDKAT 298
Score = 31.1 bits (71), Expect = 7.0
Identities = 29/206 (14%), Positives = 77/206 (37%), Gaps = 23/206 (11%)
Query: 277 KENSELKSQVTVLKSENNAMANESKQK----EERVEELLKRIHTLEARVEEADQNVLLVE 332
K N + + V + + +++ E+ ++EL + I LE ++
Sbjct: 68 KLNPLREEKKKVSVKSLEELIKDVEEELEKIEKEIKELEEEISELENE----------IK 117
Query: 333 EMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKET 392
E++QE+E L+ + + K + S S +V +
Sbjct: 118 ELEQEIERLEP-WGNFDLDLSLLLGFKYV-SVFVGTVPEDKLEELKLESDVENVEYISTD 175
Query: 393 K------LATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEAL 446
K + +E ++++ + + + ++ T + + + K +L ++ +E+E+L
Sbjct: 176 KGYVYVVVVVLKELSDEVEEELKKLGFERLELEEEGT-PSELIREIKEELEEIEKERESL 234
Query: 447 VKNIEMLRVEKSALEKNKREINEMVE 472
++ ++ L + E E+
Sbjct: 235 LEELKELAKKYLEELLALYEYLEIEL 260
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional.
Length = 2084
Score = 48.2 bits (114), Expect = 5e-05
Identities = 150/834 (17%), Positives = 328/834 (39%), Gaps = 75/834 (8%)
Query: 136 RRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKEKDWI 195
R+ +D R+ E + ++ ++++ A +A + + D +E
Sbjct: 1134 RKAEDARKAEEARKAEDA---KRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKA 1190
Query: 196 EEEQYFNDYYSSEHARLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGAC 255
EE + D +E AR R + +++ A ++ + + + D ++ +
Sbjct: 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERN 1250
Query: 256 NGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIH 315
N + + + + + + E + + K+E A+E+K+ EE+ K+
Sbjct: 1251 NEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEK-----KKAD 1305
Query: 316 TLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFS 375
+ + EEA + +E +++ E + A A + AE + A + A
Sbjct: 1306 EAKKKAEEAKK----ADEAKKKAE----EAKKKADAAKKKAEEAKKAAEAAKAEAEAAAD 1357
Query: 376 ARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQ 435
+ K +K+ + + ++ + ADE++ ++ + D+ K
Sbjct: 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAK----KKAEEDKKKADELKKA 1413
Query: 436 LAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESL 495
A + EA K E + +++ K K E + + ++ +K K E+
Sbjct: 1414 AAAKKKADEAKKKAEEKKKADEA---KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK 1470
Query: 496 QSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNK 555
++++ + E + + + E + K D ++ E A+E K A+ AK+ E K
Sbjct: 1471 KADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE-AKKAEEAKKADEAKK 1529
Query: 556 EEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQ-RLQEQLASL 614
E +K++ +A+ + + E+ E DK + R E+
Sbjct: 1530 AEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKA 1589
Query: 615 RSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRA 674
+ L++ + ++ + KK + E L K E K +V +L K+ + +K+A
Sbjct: 1590 EEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKA 1649
Query: 675 QETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQ 734
+E K + ++ + + A + + + K+ E K E+ +K+ E + K EE ++
Sbjct: 1650 EELKKA--EEENKIKAAEEAKKAEEDKKKAEEAKKAEED----EKKAAEALKKEAEEAKK 1703
Query: 735 VRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQAL 794
L+KK K+ E K E + E+A AE DK++A
Sbjct: 1704 AE-ELKKKEAEEKKKAEELKKAEEENK---------------IKAEEAKKEAEEDKKKA- 1746
Query: 795 LIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKL 854
+ K+ EEEK + +K+E ++E+ R + E
Sbjct: 1747 ---------------EEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE--------- 1782
Query: 855 EELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRL 914
EEL E+ + +++KI D+ ++ +E + ++ S++ D+ ++ ++
Sbjct: 1783 EELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQ 1842
Query: 915 KEAENVGE--SLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQ 966
E + E K+ + + +++F K+K K + D E+ + E EK D+
Sbjct: 1843 LEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKED-DEEEIEEADEIEKIDK 1895
Score = 36.7 bits (84), Expect = 0.15
Identities = 99/671 (14%), Positives = 256/671 (38%), Gaps = 44/671 (6%)
Query: 787 EGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQ 846
E K + + + + ++ ++ EE + D K E A ++E + + +
Sbjct: 1102 EAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
Query: 847 LNRTVA---KLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTV 903
R K E+ K KA RK +L+ +A E+ + +E+
Sbjct: 1162 DARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAE 1221
Query: 904 QAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEK 963
A+ E ++ +EA+ E +K + + + FE+ + A + + +K E+ K
Sbjct: 1222 DAKKAEAVKKAEEAKKDAEEAKK-AEEERNNEEIRKFEEARMAHFARR-QAAIKAEEARK 1279
Query: 964 RDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVT 1023
D+ + +E + + +++K+A ++ ++ + + +AE+ + D+ K
Sbjct: 1280 ADELKKAEEKKKADEAKKAEEKKKA--DEAKKKAEEAKKADEAKKKAEEAKKKADAAKKK 1337
Query: 1024 LQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDL 1083
+E K E K + + + ++ +++++ + + +KK + +
Sbjct: 1338 AEEAKKAAEAAKAEA-----------EAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK 1386
Query: 1084 ARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHLLQLE 1143
A K+K +++ + K ++L K K+ E + + + E
Sbjct: 1387 AEEKKKADEAKKKAEEDKKKADELKKAAAAKKKA-----DEAKKKAEEKKKADEAKKKAE 1441
Query: 1144 ASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSD 1203
+KK E K + + A + E + + + +A K + ++ +
Sbjct: 1442 EAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADE 1501
Query: 1204 LERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGGEGG 1263
++ A+ A+ +A E + + E K +++ + +
Sbjct: 1502 AKKAAEAKKKADEAKKAEEAKKADEAKKAEEA----------KKADEAKKAEEKKKADEL 1551
Query: 1264 EGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQA 1323
+ E ++K ++ + ++ +D K M E K +A +E K+ +
Sbjct: 1552 K-----KAEELKKAEE--KKKAEEAKKAEED-KNMALRKAEEAKKAEEARIEEVMKLYEE 1603
Query: 1324 QQTMRALQ---EEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVS 1380
++ M+A + E+ ++ + + + E + +K E + E++ E +
Sbjct: 1604 EKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKA 1663
Query: 1381 EEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQ 1440
E+++ ++ K E + + +++ + L + K E + ++++ + L +
Sbjct: 1664 AEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKK 1723
Query: 1441 EKETNLHKLQE 1451
+E N K +E
Sbjct: 1724 AEEENKIKAEE 1734
Score = 36.3 bits (83), Expect = 0.20
Identities = 138/819 (16%), Positives = 296/819 (36%), Gaps = 83/819 (10%)
Query: 663 LNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNE 722
+ E D + + V Q GL Y++ + K+ N + TEE ++ +
Sbjct: 1047 IIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRA--DEATEEAFGKAEEAK 1104
Query: 723 ECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCE-LSRLQANLCQLQSHIDKICQQHED 781
+ T EE + A KK ++ E + E + + + +I ++ ED
Sbjct: 1105 KTETGKAEEARKAEEA--KKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAED 1162
Query: 782 ALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTIN 841
A E K + A+ +KA + R ++ L++ E+ + K E ++E+ R +
Sbjct: 1163 ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAED 1222
Query: 842 TLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVD 901
+ + V K EE K EE K E + ++ + E + +E+
Sbjct: 1223 AKKAE---AVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARK 1279
Query: 902 TVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKV-- 959
+ + E ++ EA+ E + D K A E K A+ K + KK
Sbjct: 1280 ADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAE 1339
Query: 960 ESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDS 1019
E++K +A + +++ +A + + + KK +AE+ + ++
Sbjct: 1340 EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK---KAEEKKKADEA 1396
Query: 1020 EKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENV 1079
+K ++K K E++K + + K +++ + ++K E
Sbjct: 1397 KKKAEEDKKKADELKKA-------------AAAKKKADEAKKKAEEKKKADEAKKKAEEA 1443
Query: 1080 VEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSAHL 1139
+ K+K E++ K E+ K+ EE + A+E + +
Sbjct: 1444 -KKADEAKKKAEEA--------KKAEEAKKKAEEAK-----------KADEAKKKAEEAK 1483
Query: 1140 LQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQ--YDAYKSMDCH 1197
EA KK E K K+A+ A+ A+ A ++
Sbjct: 1484 KADEAKKKAEEAK------------------------KKADEAKKAAEAKKKADEAKKAE 1519
Query: 1198 TDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPV 1257
+ +D + A+ +A EK ++ + E K ++
Sbjct: 1520 EAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEEL----------KKAEEKKKAEEA 1569
Query: 1258 RGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQES 1317
+ E + + E +K +++V ++ E +KA E K ++ +
Sbjct: 1570 KKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE 1629
Query: 1318 NKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLS 1377
+ + +Q + EEK E +L + + ++ +K EE + E+ E
Sbjct: 1630 EEKKKVEQLKKKEAEEKKKAE-ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEK 1688
Query: 1378 NVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQM 1437
+E + ++ K E + EK+ ++ E K E + E D+++ +
Sbjct: 1689 KAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
Query: 1438 LLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQ 1476
+++E + E + + +E+ ++ +D+
Sbjct: 1749 AKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDE 1787
Score = 35.5 bits (81), Expect = 0.32
Identities = 71/402 (17%), Positives = 161/402 (40%), Gaps = 9/402 (2%)
Query: 638 KKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQIS 697
K E+ + + ++ +E+ K + R +E E + A + A A+ +
Sbjct: 1116 KAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDAR--KAEEARKAE 1173
Query: 698 NLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCE 757
+ KK + + L+K + + + E+ R A E + K+ K E
Sbjct: 1174 DAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAE 1233
Query: 758 LSRLQANLCQLQSHIDKICQQHEDALLR-AEGDKQQALLIAQQDQKAIQDRLSQVLKELE 816
++ A + + + R A ++QA + A++ +KA + + ++ K+ +
Sbjct: 1234 EAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKAD 1293
Query: 817 EEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLK 876
E K ++ K + A + ++ + +++ K + K + EE K E K
Sbjct: 1294 EAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA----K 1349
Query: 877 SEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKT--H 934
+E EA E+E + + +E K + + + ++ +E + E+ +K D K
Sbjct: 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADE 1409
Query: 935 LADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLN 994
L + K K ++ K E K E++K+ + + +K A E+ + +
Sbjct: 1410 LKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEA 1469
Query: 995 DQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKE 1036
++++ +E +A++ + + K E K E +K+
Sbjct: 1470 KKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKK 1511
>gnl|CDD|227512 COG5185, HEC1, Protein involved in chromosome segregation,
interacts with SMC proteins [Cell division and
chromosome partitioning].
Length = 622
Score = 47.7 bits (113), Expect = 6e-05
Identities = 60/417 (14%), Positives = 149/417 (35%), Gaps = 46/417 (11%)
Query: 473 SLNSNLDK-VQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLR 531
L LD +Q + + L EKL + S + + ++++
Sbjct: 204 RLIIKLDMCLQPLKTLDQQDRYELMVEKLLFDYFTESYKSFLKLEDNYEPSEQELKLGFE 263
Query: 532 EDLLIANEDLKNAKLAKELLE---QNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNE 588
+ + I N D+ N K + L Q ++ + + + ++++ + + M +
Sbjct: 264 KFVHIINTDIANLKTQNDNLYEKIQEAMKISQKIKTLREKWRALKSDSNKYENYVNAMKQ 323
Query: 589 QISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQE 648
+ ++ +E E++ +E++ +L+S+ + L L + + + E E +
Sbjct: 324 KSQEWPGKLEKLKSEIELKEEEIKALQSNIDELHKQL--RKQGISTEQFELMNQERE--K 379
Query: 649 LLVKQESLKGQVVRLNKELEDTEKRAQETKASL---VQQASGLDADYQNQISNLKKQNEE 705
L + + + Q +L K ++ + AQ SL ++Q L + S + +
Sbjct: 380 LTRELDKINIQSDKLTKSVKSRKLEAQGIFKSLEKTLRQYDSLIQNITRSRSQIGHNVND 439
Query: 706 CVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANL 765
+ KIN+++ + + + + ++ ++ +E + +
Sbjct: 440 -----SSLKINIEQLFP------------KGSGINESIKKSILELNDEIQERIKTEENKS 482
Query: 766 CQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRI 825
L+ I + + + Q + ++ LS+ + E K +R
Sbjct: 483 ITLEEDIK---------------NLKHDINELTQILEKLELELSEANSKFELSKEENERE 527
Query: 826 KRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREAL 882
E+ +N L ++ E+L TE + L+ DL +R +
Sbjct: 528 LVAQRIEIEKLEKELNDLNLLSKTSILDAEQLVQSTEIK---LDELKVDLNRKRYKI 581
Score = 33.0 bits (75), Expect = 1.8
Identities = 59/326 (18%), Positives = 123/326 (37%), Gaps = 19/326 (5%)
Query: 393 KLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEM 452
K+ T RE+ +K + M Q+ +L++ K+++ E +AL NI+
Sbjct: 296 KIKTLREKWRALKSDSNKYENYVNAMKQKSQEWPGKLEKLKSEIELKEEEIKALQSNIDE 355
Query: 453 LRVEKSALEKNKREINEMV---ESLNSNLDKVQKNNSRLSK--------INESLQS-EKL 500
L + + + M E L LDK+ + +L+K +S EK
Sbjct: 356 LHKQLRKQGISTEQFELMNQEREKLTRELDKINIQSDKLTKSVKSRKLEAQGIFKSLEKT 415
Query: 501 FLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQT 560
Q + N ++ + + E L + + K+ + + +E+Q
Sbjct: 416 LRQYDSLIQNITRSRSQIGHNVNDSSLKINIEQLFPKGSGINES--IKKSILELNDEIQE 473
Query: 561 LLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITI-EANDKELQRLQEQLASLRSDKE 619
+ E +E +++ L D +++ + + K E+ + EAN K +E L + +
Sbjct: 474 RIKTEENKSITLEEDIKNLKHDINELTQILEKLELELSEANSKFELSKEENERELVAQRI 533
Query: 620 SLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR----LNKELEDTEKRAQ 675
+E + + S E VQ +K + LK + R ++K++
Sbjct: 534 EIEKLEKELNDLNLLSKTSILDAEQLVQSTEIKLDELKVDLNRKRYKIHKQVIHVIDITS 593
Query: 676 ETKASLVQQASGLDADYQNQISNLKK 701
+ K ++ L+ + I L+
Sbjct: 594 KFKINIQSSLEDLENELGKVIEELRN 619
>gnl|CDD|236892 PRK11281, PRK11281, hypothetical protein; Provisional.
Length = 1113
Score = 47.2 bits (113), Expect = 1e-04
Identities = 70/311 (22%), Positives = 125/311 (40%), Gaps = 62/311 (19%)
Query: 1400 LDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQML---LQEKETNLHKLQERCEHQ 1456
L+AE + +Q +L +T A + K++ Q+ E +Q+L L++ + L L++
Sbjct: 54 LEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKD----- 108
Query: 1457 CRNITGLEERCTSL-KTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQ----- 1510
EE +L ++ QL L + ++Q Q +L NSQ
Sbjct: 109 ----DNDEETRETLSTLSLRQLESRLA-------QTLDQLQNAQNDL--AEYNSQLVSLQ 155
Query: 1511 -----------SNCEKLKQLQKLLHSAENEKRVL----QERLDTCQASLAELRRQQVNRL 1555
+N ++L+Q++ LL + + L + L QA L Q L
Sbjct: 156 TQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDLQRKSL 215
Query: 1556 ENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTM----RALQEEKYALETKLSQTK 1611
E L Q L ++ +D A Q Q Q R EK E SQ +
Sbjct: 216 EGNTQL----QDLLQKQRDYLTARIQRLEHQLQLLQEAINSKRLTLSEKTVQEA-QSQDE 270
Query: 1612 AAANSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLH 1671
AA N L +E LE L++SQ ++ +E++ L ++ ++N L+ L
Sbjct: 271 AARIQANPLVAQE-----LEINLQLSQRLLKA------TEKLNTLTQQNLRVKNWLDRLT 319
Query: 1672 DKIQMLRDQLN 1682
+ +++Q++
Sbjct: 320 QSERNIKEQIS 330
Score = 36.4 bits (85), Expect = 0.19
Identities = 52/236 (22%), Positives = 85/236 (36%), Gaps = 53/236 (22%)
Query: 1275 RKGVRNLMQQVAQIERERDDLKAMTQALKRE------IKDLSDAHTQESNKMAQAQQTMR 1328
++ + ++ Q + E + LK RE ++ L Q +++ AQ +
Sbjct: 86 KQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQLESRLAQTLDQLQNAQNDL- 144
Query: 1329 ALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDD 1388
A NSQ + LQ E+ L S+ Q +
Sbjct: 145 -----------------AEYNSQLVS-------LQTQPERAQA---ALYANSQRLQQIRN 177
Query: 1389 KLMKCRESGARLDAEKRA-LQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEK--ETN 1445
L + G L +R LQ E + A + +LQR +LEG+ Q LQ LLQ++
Sbjct: 178 LLKGGKVGGKALRPSQRVLLQAEQALLNA---QNDLQRKSLEGNTQ-LQDLLQKQRDYLT 233
Query: 1446 LHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRN 1501
I LE + L+ I+ LTL + E + + E +Q N
Sbjct: 234 AR------------IQRLEHQLQLLQEAINSKRLTLSEKTVQEAQSQDEAARIQAN 277
Score = 31.8 bits (73), Expect = 4.4
Identities = 81/421 (19%), Positives = 157/421 (37%), Gaps = 85/421 (20%)
Query: 550 LLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQE 609
L++Q+ E+ LL I++ K + E + +Q+++ + EL+ L++
Sbjct: 60 LVQQDLEQTLALLDKIDRQKEETE-----------QLKQQLAQAPAKLRQAQAELEALKD 108
Query: 610 QLASL---RSDKES---LEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRL 663
S LE+ L T + + + + E+ Q LV ++ Q R
Sbjct: 109 DNDEETRETLSTLSLRQLESRLAQTLD--QLQNAQNDLAEYNSQ--LVSLQT---QPERA 161
Query: 664 NKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEE 723
L +R Q+ + L G + S E L + +L++++ E
Sbjct: 162 QAALYANSQRLQQIRNLL---KGGKVGGKALRPSQRVLLQAEQA--LLNAQNDLQRKSLE 216
Query: 724 CVTKLT-------EEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKIC 776
T+L + LE +L +++ K LS + QS D+
Sbjct: 217 GNTQLQDLLQKQRDYLTARIQRLEHQL-QLLQEAINSKRLTLSEKTVQ--EAQS-QDEAA 272
Query: 777 QQHEDALLRAEGDKQQAL---LIAQQDQ-----------KAIQDRLSQVLKELEEE---- 818
+ + L+ E + L L+ ++ K DRL+Q + ++E+
Sbjct: 273 RIQANPLVAQELEINLQLSQRLLKATEKLNTLTQQNLRVKNWLDRLTQSERNIKEQISVL 332
Query: 819 KCT--LDRI---KRESAGRSEQDRN-------------TINTLREQLNRT---VAKLEEL 857
K + L RI ++++ ++ IN R+ L + + KLE
Sbjct: 333 KGSLLLSRILYQQQQALPSADLIEGLADRIADLRLEQFEINQQRDALFQPDAYIDKLEAG 392
Query: 858 --KTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLK 915
T+E + L + L RE L +++L QL+L+ + + Q QLL + L+
Sbjct: 393 HKSEVTDEVRDAL---LQLLDERRELLDQLNKQLNNQLNLAIN-LQLNQQQLLSVSDSLQ 448
Query: 916 E 916
Sbjct: 449 S 449
Score = 31.8 bits (73), Expect = 4.5
Identities = 62/312 (19%), Positives = 121/312 (38%), Gaps = 48/312 (15%)
Query: 308 EELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAV-----IQDAEGK--D 360
++ ++ L + ++ L+ ++++Q L LL R + A K
Sbjct: 39 ADVQAQLDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQ 98
Query: 361 IPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQ 420
+ LK R + S S+ + E++LA +QL + D ++YN SQ
Sbjct: 99 AQAELEALKDDNDEETRETLS-TLSLR-QLESRLAQTLDQLQNAQN-----DLAEYN-SQ 150
Query: 421 QVTSLTS-------------QLDQTKAQLAQVGREKEALVKN-IEMLRVEKSALEK---- 462
V+ T +L Q + L +AL + +L+ E++ L
Sbjct: 151 LVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKALRPSQRVLLQAEQALLNAQNDL 210
Query: 463 NKREI---NEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVE 519
++ + ++ + L D + RL + LQ N S+ +E +
Sbjct: 211 QRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQE----AINSKRLTLSEKTVQEAQ 266
Query: 520 LRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERL 579
+D R++ + L+A E N +L++ LL+ E++ TL + K ++RL
Sbjct: 267 ---SQDEAARIQANPLVAQELEINLQLSQRLLKAT-EKLNTLTQQNLRVKN----WLDRL 318
Query: 580 LLDRSDMNEQIS 591
++ EQIS
Sbjct: 319 TQSERNIKEQIS 330
>gnl|CDD|217933 pfam04156, IncA, IncA protein. Chlamydia trachomatis is an
obligate intracellular bacterium that develops within a
parasitophorous vacuole termed an inclusion. The
inclusion is non-fusogenic with lysosomes but intercepts
lipids from a host cell exocytic pathway. Initiation of
chlamydial development is concurrent with modification
of the inclusion membrane by a set of C.
trachomatis-encoded proteins collectively designated
Incs. One of these Incs, IncA, is functionally
associated with the homotypic fusion of inclusions. This
family probably includes members of the wider Inc family
rather than just IncA.
Length = 186
Score = 44.4 bits (105), Expect = 1e-04
Identities = 26/110 (23%), Positives = 50/110 (45%)
Query: 597 IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESL 656
+E EL L++QL+ L+ + E LE + + +S LE + L ++ L + ESL
Sbjct: 74 LEELQGELSELKQQLSELQEELEDLEERIAELESELEDLKEDLQLLRELLKSLEERLESL 133
Query: 657 KGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEEC 706
+ + L KEL + + +E L ++ L + Q +++
Sbjct: 134 EESIKELAKELRELRQDLREEVEELREELERLQENLQRLQEAIQELQSLL 183
Score = 33.2 bits (76), Expect = 0.65
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Query: 604 LQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRL 663
L + E L+ L + + L + + E LE + EL + E LK + L
Sbjct: 60 LLLKAPVQSVRPQKLEELQGELSELKQQLSELQEELEDLEERIAELESELEDLKEDLQLL 119
Query: 664 NKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEE 723
+ L+ E+R + + S+ + ++ L++ E V +L EE L++ +
Sbjct: 120 RELLKSLEERLESLEESI--------KELAKELRELRQDLREEVEELREELERLQENLQR 171
Query: 724 CVTKLTEEKE 733
+ E +
Sbjct: 172 LQEAIQELQS 181
Score = 31.3 bits (71), Expect = 2.9
Identities = 21/103 (20%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
QQ+++++ E +DL+ L+ E++DL + + ++ + +L+E L +L
Sbjct: 86 QQLSELQEELEDLEERIAELESELEDLKEDLQLLRELLKSLEERLESLEESIKELAKELR 145
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQ 1385
+ E +++ EEL+ L+E + L+ + + Q
Sbjct: 146 EL---RQDLREEVEELREELERLQENLQRLQEAIQELQSLLEQ 185
Score = 30.9 bits (70), Expect = 3.8
Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 1050 QVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVK 1109
+++ ELS++ + S+L +L L+ + + +L LK+ + E+ + + LE L +
Sbjct: 76 ELQGELSELKQQLSELQEELEDLEERIAELESELEDLKEDLQLLRELLKSLEERLESLEE 135
Query: 1110 ECEEKEVVLLDL-------CARLGGAEERVRASSAHLLQLEASKKDVEHKL 1153
+E L +L L ER++ + L + + + +L
Sbjct: 136 SIKELAKELRELRQDLREEVEELREELERLQENLQRLQEAIQELQSLLEQL 186
Score = 30.5 bits (69), Expect = 5.0
Identities = 21/102 (20%), Positives = 47/102 (46%)
Query: 843 LREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDT 902
L++QL+ +LE+L+ R E ++ LE DL+ RE L + E L+ ++
Sbjct: 84 LKQQLSELQEELEDLEERIAELESELEDLKEDLQLLRELLKSLEERLESLEESIKELAKE 143
Query: 903 VQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDK 944
++ + ++E E L+++L + + + ++
Sbjct: 144 LRELRQDLREEVEELREELERLQENLQRLQEAIQELQSLLEQ 185
Score = 30.1 bits (68), Expect = 7.6
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 271 EKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLL 330
E + L + +EL+S++ LK + + K EER+E L + I L + E Q++
Sbjct: 94 ELEDLEERIAELESELEDLKEDLQLLRELLKSLEERLESLEESIKELAKELRELRQDLRE 153
Query: 331 -VEEMQQELELLQNTLRDIARAV 352
VEE+++ELE LQ L+ + A+
Sbjct: 154 EVEELREELERLQENLQRLQEAI 176
>gnl|CDD|225803 COG3264, COG3264, Small-conductance mechanosensitive channel [Cell
envelope biogenesis, outer membrane].
Length = 835
Score = 44.7 bits (106), Expect = 4e-04
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 757 ELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELE 816
E ++L+A L LQ ++ ++ E+A AE + QA LI Q+ AI D+LSQ L +
Sbjct: 23 ESAQLEAALQLLQEAVNS--KRQEEAEPAAEEAELQAELIQQEL--AINDQLSQALNQQT 78
Query: 817 EEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTE------EEKAILER 870
E L R+ A Q + T+REQ+ L + + E E+
Sbjct: 79 ERLNALASDDRQLANLLLQLLQSSRTIREQIAVLRGSLLLSRILLQQLGPLPEAGQPQEQ 138
Query: 871 KISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLD 930
++ ER+AL E + + ++ QL R + + + + R++LL+
Sbjct: 139 --FEVTQERDALQAEKAYI--------NALEGQAEQLTAEVRDI--LDQILD-TRRELLN 185
>gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding
[General function prediction only].
Length = 239
Score = 43.5 bits (103), Expect = 5e-04
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 526 MNRRLREDLLIANEDLKNAKLAKELLEQNKE--EMQTLLAHIEKSKGDVEAEMERLLLDR 583
MN L+ L I DL+ +L + E K + + L + K+ +E E+E
Sbjct: 2 MNNNLKSLLAIQKLDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELE------ 55
Query: 584 SDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLE 643
D+ Q+S+ E I+ + ++R +E+L++++ ++E L ++ + + LE
Sbjct: 56 -DLENQVSQLESEIQEIRERIKRAEEKLSAVKDERE-----LRALNIEIQIAKERINSLE 109
Query: 644 HEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQN 703
E+ EL+ + E L+ ++ L + LE EK E +A L ++ + + + L +
Sbjct: 110 DELAELMEEIEKLEKEIEDLKERLERLEKNLAEAEARLEEEVAEIR----EEGQELSSKR 165
Query: 704 EECVTKLTEE 713
EE KL E
Sbjct: 166 EELKEKLDPE 175
Score = 40.4 bits (95), Expect = 0.005
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 1320 MAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNV 1379
M +++ A+Q+ L+ + + + +A+ + EL+ L + + LE+ L ++
Sbjct: 2 MNNNLKSLLAIQK----LDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELEDL 57
Query: 1380 SEEKSQGDDKLMKCRESGAR----LDAEKRALQDELSRTEARVTKLELQRVALEGDQQRL 1435
+ SQ + ++ + RE R L A K + EL + + + +LE + L
Sbjct: 58 ENQVSQLESEIQEIRERIKRAEEKLSAVKD--ERELRALNIEIQIAKERINSLEDELAEL 115
Query: 1436 QMLLQEKETNLHKLQERCEHQCRNITGLEER 1466
+++ E + L+ER E +N+ E R
Sbjct: 116 MEEIEKLEKEIEDLKERLERLEKNLAEAEAR 146
Score = 35.4 bits (82), Expect = 0.20
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 716 NLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKI 775
L + + ++ E ++ ++ A + + E + EL L+ + QL+S I +I
Sbjct: 14 KLDLEKDRLEPRIKEIRKALKKAKA--ELEALNKALEALEIELEDLENQVSQLESEIQEI 71
Query: 776 CQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQ 835
R + + L A +D++ ++ L+ ++ +E +L+ E E+
Sbjct: 72 ---------RERIKRAEEKLSAVKDERELRA-LNIEIQIAKERINSLEDELAELMEEIEK 121
Query: 836 DRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE 888
I L+E+L R L E + R EEE A + + +L S+RE L + +
Sbjct: 122 LEKEIEDLKERLERLEKNLAEAEARLEEEVAEIREEGQELSSKREELKEKLDP 174
Score = 35.0 bits (81), Expect = 0.27
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 450 IEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRI 509
I+ L +EK LE +EI + ++ + L+ + K L E L+++ L++E+ I
Sbjct: 12 IQKLDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELEDLENQVSQLESEIQEI 71
Query: 510 NSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSK 569
+ E +L +D L I + K + E +E+ L+ IEK +
Sbjct: 72 RERIKRAEEKLSAVKDERE--LRALNIEIQIAKERINSLE------DELAELMEEIEKLE 123
Query: 570 GDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSD 617
++E ERL ++ E ++ E + +E Q L + L+
Sbjct: 124 KEIEDLKERLERLEKNLAEAEARLEEEVAEIREEGQELSSKREELKEK 171
Score = 31.6 bits (72), Expect = 3.5
Identities = 27/166 (16%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 601 DKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQV 660
+ + L +K+ LE + + + L+++ + E L ++ L ++ E L+ QV
Sbjct: 2 MNNNLKSLLAIQKLDLEKDRLEPRIKEIRKALKKAKAELEALNKALEALEIELEDLENQV 61
Query: 661 VRLNKELEDTEKRAQET-----KASLVQQASGLDADYQNQISNLKKQNEECV------TK 709
+L E+++ +R + ++ L+ + Q + +E K
Sbjct: 62 SQLESEIQEIRERIKRAEEKLSAVKDERELRALNIEIQIAKERINSLEDELAELMEEIEK 121
Query: 710 LTEEKINLKKQNEECVTKLTEEKEQVRAALEK---KLHATVKQITE 752
L +E +LK++ E L E + ++ + + + + E
Sbjct: 122 LEKEIEDLKERLERLEKNLAEAEARLEEEVAEIREEGQELSSKREE 167
>gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584). This
protein is found in bacteria and eukaryotes. Proteins in
this family are typically between 943 to 1234 amino acids
in length. This family contains a P-loop motif suggesting
it is a nucleotide binding protein. It may be involved in
replication.
Length = 1198
Score = 44.7 bits (106), Expect = 5e-04
Identities = 116/563 (20%), Positives = 213/563 (37%), Gaps = 80/563 (14%)
Query: 549 ELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQ 608
E L+++ E++ +L ++ G++ A+ ERL ++ + E ++ + + +L+
Sbjct: 249 EKLQEDFEQLLSLELRLQHLHGELVADEERLAEEQEERQEAKNRLRQQLRTLEDQLK--- 305
Query: 609 EQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELE 668
E L + + A L +S LE + +K E E L + ELE
Sbjct: 306 EARDELNQELSAANAKLAADRSELELLEDQKGAFEDADIEQLQADLDQLPSIRS---ELE 362
Query: 669 DTEKR--AQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVT 726
+ E R A K VQ+ Y+ +K+Q E + K E ++
Sbjct: 363 EVEARLDALTGKHQDVQRK------YERLKQKIKEQLERDLEKNNERLAAIR-------- 408
Query: 727 KLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRA 786
EEK++ +AA+E+ L A Q+ ++ + +L+ + ++ Q+ + A
Sbjct: 409 ---EEKDRQKAAIEEDLQALESQLRQQLEAGKLEFNEEEYELELRLGRLKQRLDSATATP 465
Query: 787 EGDKQQALLI------------AQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSE 834
E +Q + A+ + + +Q L Q+ K +E L R +R +
Sbjct: 466 EELEQLEINDEALEKAQEEQEQAEANVEQLQSELRQLRKRRDEALEALQRAERRLLQLRQ 525
Query: 835 QDRNT-------INTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESE 887
+L L EE + +LER DL +
Sbjct: 526 ALDELELQLSPQAGSLLHFLRNEAPGWEESIGKVISP-ELLERT--DLDPQLVEGSDSDT 582
Query: 888 ELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAK 947
V L L V A E RL++AE +S + L +N E +
Sbjct: 583 LYGVSLDLQRLDVPDYAANETELRERLQQAEEALQSAVAKQKQAEEQLVQANAELE---- 638
Query: 948 SNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKEL 1007
K+ E+E R + LQ++ +E+Q+L+++L ++ +
Sbjct: 639 -------EQKRAEAEARTALKQARLDLQRLQ-----NEQQSLKDKLE------LAIAERK 680
Query: 1008 LQAEQIRLDLDSEKVTLQEKCK-FLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLS 1066
QAE LD++ L E+ + FLE K+ + + + L +QV +L
Sbjct: 681 QQAETQLRQLDAQLKQLLEQQQAFLEALKDDFRELRTERLAKWQVVE---------GELD 731
Query: 1067 HQLSLLQRKKENVVEDL-ARLKQ 1088
+QL+ L E ARLK+
Sbjct: 732 NQLAQLSAAIEAARTQAKARLKE 754
Score = 42.8 bits (101), Expect = 0.002
Identities = 82/416 (19%), Positives = 152/416 (36%), Gaps = 27/416 (6%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDA-HTQESNKMAQAQQTMRALQEEKYALETKL 1341
Q +E+ + L A+ + R+ + + ES Q + EE+Y LE +L
Sbjct: 392 QLERDLEKNNERLAAIREEKDRQKAAIEEDLQALESQLRQQLEAGKLEFNEEEYELELRL 451
Query: 1342 SQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLD 1401
+ K +S + EEL+ L LE + ++ + + R+ R D
Sbjct: 452 GRLKQRLDSAT----ATPEELEQLEINDEALEKAQEEQEQAEANVEQLQSELRQLRKRRD 507
Query: 1402 AEKRALQDELSRTEARVTKL-ELQRVALEGDQQRLQMLLQEK---ETNLHK-----LQER 1452
ALQ R L EL+ L L E E ++ K L ER
Sbjct: 508 EALEALQRAERRLLQLRQALDELELQLSPQAGSLLHFLRNEAPGWEESIGKVISPELLER 567
Query: 1453 CEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSN 1512
+ + + G + T ++D L + +A ETELR +Q + L +++ Q
Sbjct: 568 TDLDPQLVEG-SDSDTLYGVSLDLQRLDVPDYAANETELRERLQQAEEAL-QSAVAKQKQ 625
Query: 1513 CEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREI 1572
E +QL + E +KR E + + +L+R Q + +D L+ K++
Sbjct: 626 AE--EQLVQANAELEEQKRAEAEARTALKQARLDLQRLQNEQQSLKDKLELAIAERKQQA 683
Query: 1573 KDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANS-------QNELEVKEV 1625
+ + ++ + QQ ++ + K E
Sbjct: 684 ETQLRQLDAQLKQLLEQQQAFLEALKDDFRELRTERLAKWQVVEGELDNQLAQLSAAIEA 743
Query: 1626 ARAGLESQLRM--SQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRD 1679
AR +++L+ Q+ E D + +L R+ EL +E + + +R+
Sbjct: 744 ARTQAKARLKELKKQYDRELASLDVDPNTVKELKRQIEELETTIERIAVRRPEVRE 799
Score = 38.9 bits (91), Expect = 0.033
Identities = 114/701 (16%), Positives = 243/701 (34%), Gaps = 83/701 (11%)
Query: 781 DALLRAEGDKQQALLIAQQDQ--KAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRN 838
AL + + + + + +++ RL + EL ++ L + E + R
Sbjct: 236 QALRAIQKVAPEIEKLQEDFEQLLSLELRLQHLHGELVADEERLAEEQEERQEAKNRLRQ 295
Query: 839 TINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSED 898
+ TL +QL +L + + + A ++ L+ ++ A E QL D
Sbjct: 296 QLRTLEDQLKEARDELNQELSAANAKLAADRSELELLEDQKGAFEDADIE---QLQADLD 352
Query: 899 KVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKK 958
++ +++++L E RL D L K +E+ K + R+ ++K
Sbjct: 353 QLPSIRSELEEVEARL------------DALTGKHQDVQRKYERLKQKIKEQLERD-LEK 399
Query: 959 VESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLD 1018
D I +++ QAL +QL Q A + + ++ L L
Sbjct: 400 NNERLAAIREEKDRQKAAI-----EEDLQALESQLRQQLE--AGKLEFNEEEYELELRLG 452
Query: 1019 SEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKEN 1078
K L E ++ + L + + E Q + L +L
Sbjct: 453 RLKQRLDSATATPEELEQLEINDEA----LEKAQEEQEQAEANVEQLQSEL--------- 499
Query: 1079 VVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLD--------LCARLGGAEE 1130
+L+++ ++++E R + L L + +E E+ L L G EE
Sbjct: 500 -----RQLRKRRDEALEALQRAERRLLQLRQALDELELQLSPQAGSLLHFLRNEAPGWEE 554
Query: 1131 RVR--ASSAHL----LQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARI 1184
+ S L L + + L + L+R+ Y A E EL
Sbjct: 555 SIGKVISPELLERTDLDPQLVEGSDSDTLYGVSLDLQRLDVPDYAA------NETELRER 608
Query: 1185 RAQYDAYKSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAG 1244
Q + +++ + E + Q +AE + R ++ + + R
Sbjct: 609 LQQAE--EALQSAVAKQKQAEE-QLVQANAELEEQKRAEAEARTALKQARLDLQRLQ--- 662
Query: 1245 GKMTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKR 1304
+ S + + +R L Q+ Q+ ++ + R
Sbjct: 663 NEQQSLKDKLELAIAER---------KQQAETQLRQLDAQLKQLLEQQQAFLEALKDDFR 713
Query: 1305 EIKDLSDAHTQ--ESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEEL 1362
E++ A Q E Q Q A++ + + +L + K + + ++D +
Sbjct: 714 ELRTERLAKWQVVEGELDNQLAQLSAAIEAARTQAKARLKELKKQYDRELASLDVDPNTV 773
Query: 1363 QHLREKVLTLELTLSNVS---EEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVT 1419
+ L+ ++ LE T+ ++ E + + + L E+ L +L E+
Sbjct: 774 KELKRQIEELETTIERIAVRRPEVREYRAFMQETWLHRDSLREERPNLAIQLRELESSAE 833
Query: 1420 KLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNI 1460
+L+ + L D + + L+++ L K ++ + R +
Sbjct: 834 ELQQELTRLIKDTKLRRKKLEQERKALEKQLDQLDELLRGL 874
Score = 37.4 bits (87), Expect = 0.093
Identities = 68/322 (21%), Positives = 125/322 (38%), Gaps = 54/322 (16%)
Query: 1402 AEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNIT 1461
E LQ++ + + +L+ L D++RL +E++ ++L+++
Sbjct: 246 PEIEKLQEDFEQLLSLELRLQHLHGELVADEERLAEEQEERQEAKNRLRQQ--------- 296
Query: 1462 GLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQK 1521
L LK D+LN L A+A R E++ L+ ++ E+L+
Sbjct: 297 -LRTLEDQLKEARDELNQELSAANAKLAADRSELELLEDQKGAF---EDADIEQLQADLD 352
Query: 1522 LLHSAENEKRVLQERLDTCQASLAEL-----RRQQVNRLENQDDLKAMTQALK--REIKD 1574
L S +E ++ RLD ++ R +Q + + + DL+ + L RE KD
Sbjct: 353 QLPSIRSELEEVEARLDALTGKHQDVQRKYERLKQKIKEQLERDLEKNNERLAAIREEKD 412
Query: 1575 L------SDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARA 1628
D ES Q + EE+Y LE +L +
Sbjct: 413 RQKAAIEEDLQALESQLRQQLEAGKLEFNEEEYELELRLGR------------------- 453
Query: 1629 GLESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNK-LENLHDKIQMLRDQLNSEIKR 1687
L+ +L + E ++E + +E E +E L +++ LR + + ++
Sbjct: 454 -LKQRLDSATATPEELEQLEINDEALEKAQEEQEQAEANVEQLQSELRQLRKRRDEALEA 512
Query: 1688 RQLYIYRDTRAGKEMQQLRQAL 1709
Q RA + + QLRQAL
Sbjct: 513 LQ-------RAERRLLQLRQAL 527
Score = 34.3 bits (79), Expect = 0.82
Identities = 126/736 (17%), Positives = 257/736 (34%), Gaps = 112/736 (15%)
Query: 112 ALDAAQAHLREMREER---IQDLNTALRRLDDERREN-EKLRKMNSVYKEQLDEAHHTNE 167
L A + L E +EER L LR L+D+ +E ++L + S +L E
Sbjct: 271 ELVADEERLAEEQEERQEAKNRLRQQLRTLEDQLKEARDELNQELSAANAKLAADRSELE 330
Query: 168 ALTNDLEKLTTDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALWRDVVDIKRSFT 227
L + ++ + D + ++ E ARL AL D++R +
Sbjct: 331 LLEDQK------GAFEDADIEQLQADLDQLPSIRSELEEVE-ARLDALTGKHQDVQRKYE 383
Query: 228 AMQSATEQDLSKIRSDLNQSTRQMSGACNGLVA-----LSAGSSATNAEKDKLVKENSEL 282
++ ++ L + N+ + + A L A S + + E +E
Sbjct: 384 RLKQKIKEQLERDLEKNNERLAAIREEKDRQKAAIEEDLQALESQLRQQLEAGKLEFNEE 443
Query: 283 KSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQ 342
+ ++ + + + E L+++ + +E+A + E ++L+
Sbjct: 444 EYELELRLGRLKQRLDSATATPE----ELEQLEINDEALEKAQEEQEQAEANVEQLQSEL 499
Query: 343 NTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLH 402
LR R++ L +
Sbjct: 500 RQLRK-----------------------------------------RRDEALEALQRAER 518
Query: 403 TMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEK 462
+ + ++ DE + +S Q SL L E V + E+L +
Sbjct: 519 RLLQLRQALDELELQLSPQAGSLLHFLRNEAPGW----EESIGKVISPELLERTDLDPQL 574
Query: 463 NKREINEMVESLNSNLDKVQKNNSRLSK--INESLQSEKLFLQNELDRINSDMDAREVEL 520
+ ++ + ++ +L ++ + ++ + E LQ + LQ+ + + + + V+
Sbjct: 575 VEGSDSDTLYGVSLDLQRLDVPDYAANETELRERLQQAEEALQSAVAKQ-KQAEEQLVQA 633
Query: 521 RGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGD--------- 571
+ + +R + A LK A+L L++ + E Q+L +E + +
Sbjct: 634 NAELEEQKRAEAE---ARTALKQARL---DLQRLQNEQQSLKDKLELAIAERKQQAETQL 687
Query: 572 --VEAEMERLLLDRSDMNEQIS--KYEITIEANDKELQRLQEQLASLRSDKESLEAILFD 627
++A++++LL + E + E+ E K E L ++EA
Sbjct: 688 RQLDAQLKQLLEQQQAFLEALKDDFRELRTERLAKWQVVEGELDNQLAQLSAAIEAA--- 744
Query: 628 TQSHLEQSDVKKEQLEHEVQELLVKQE---SLKGQVVRLNKELEDTEKRAQETKA--SLV 682
+ K+Q + E+ L V LK Q+ L +E R E + + +
Sbjct: 745 RTQAKARLKELKKQYDRELASLDVDPNTVKELKRQIEELETTIERIAVRRPEVREYRAFM 804
Query: 683 QQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKK 742
Q+ + + NL Q E + E + L T+L ++ + R LE++
Sbjct: 805 QETWLHRDSLREERPNLAIQLRELESSAEELQQEL--------TRLIKDTKLRRKKLEQE 856
Query: 743 LHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQK 802
A KQ L +L L L+ + ++ + E A L ++ K
Sbjct: 857 RKALEKQ--------LDQLDELLRGLRDEMRQLAELKEPANANQAEGSISERLDQLEEFK 908
Query: 803 AIQDRLS-QVLKELEE 817
+ RLS + K LE
Sbjct: 909 RKRKRLSGDLKKFLER 924
>gnl|CDD|218661 pfam05622, HOOK, HOOK protein. This family consists of several
HOOK1, 2 and 3 proteins from different eukaryotic
organisms. The different members of the human gene family
are HOOK1, HOOK2 and HOOK3. Different domains have been
identified in the three human HOOK proteins, and it was
demonstrated that the highly conserved NH2-domain
mediates attachment to microtubules, whereas the central
coiled-coil motif mediates homodimerisation and the more
divergent C-terminal domains are involved in binding to
specific organelles (organelle-binding domains). It has
been demonstrated that endogenous HOOK3 binds to Golgi
membranes, whereas both HOOK1 and HOOK2 are localised to
discrete but unidentified cellular structures. In mice
the Hook1 gene is predominantly expressed in the testis.
Hook1 function is necessary for the correct positioning
of microtubular structures within the haploid germ cell.
Disruption of Hook1 function in mice causes abnormal
sperm head shape and fragile attachment of the flagellum
to the sperm head.
Length = 713
Score = 44.4 bits (105), Expect = 6e-04
Identities = 79/354 (22%), Positives = 150/354 (42%), Gaps = 30/354 (8%)
Query: 1275 RKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEK 1334
+ + L ++ ++E RDD + + L++E+ +L ++++ +AL++E
Sbjct: 245 QSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQ----HRNDELTSLAAESQALKDEI 300
Query: 1335 YALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCR 1394
L S +Q E +K E+L LR +V LE + + Q +++L K
Sbjct: 301 DVLRES-SDKAKKLEAQVETYKKKLEDLNDLRRQVKLLEERNAMYMQNTVQLEEELKKAN 359
Query: 1395 ESGARLDAEKRALQD---ELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHK--- 1448
+ +L+ KR +Q+ +LS + KLE + LE +L+ L +EKE L +
Sbjct: 360 AARGQLETYKRQVQELHAKLSEESKKADKLEFEYKRLEE---KLEALQKEKERLLAERDS 416
Query: 1449 LQERCEH-QCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQR-NLMDTS 1506
L+E E +C + T+ NL E + E R ++ LQ N M
Sbjct: 417 LRETNEELRCGQAQQDQLTQADAGTSPSGDNLAAELLPS---EYREKLIRLQHENKMLRL 473
Query: 1507 LNSQSNCEKLKQLQKLLHSA-------ENEKRVLQERLDTCQASLAELRRQQVNRLENQD 1559
S E++ +LQ+LL A E + R+ +R+ Q + +L++ + +
Sbjct: 474 GQEGSENERITELQQLLEDANRRNNELETQLRLANQRILELQQQVEDLQKALQEQGSKSE 533
Query: 1560 DLKAMTQALKREIKDLSDAHTQESNKMAQ----AQQTMRALQEEKYALETKLSQ 1609
D + L+ ++ L +A+ + K Q + L + LE L +
Sbjct: 534 DSSLLKSKLEEHLEQLHEANEELQKKREQIEELEPDQDQNLSRKIAELEAALQK 587
Score = 34.0 bits (78), Expect = 0.90
Identities = 74/358 (20%), Positives = 144/358 (40%), Gaps = 56/358 (15%)
Query: 1342 SQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLD 1401
Q K A EA ++K+E L ++ L+ + + EEK+ + K +E A+L+
Sbjct: 172 QQLKKALEDLKEAQEEKDE----LAQRCHELDKQVLLLQEEKNSLQQENEKLQERLAQLE 227
Query: 1402 AE----KRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQC 1457
+ + + ++++ +L+ + LE + ++ +E E L +LQ H+
Sbjct: 228 GSSLGPNQLGSKKYNLLQSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQ----HRN 283
Query: 1458 RNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLK 1517
+T L +LK ID L + ++A E ++ +T ++ L D L
Sbjct: 284 DELTSLAAESQALKDEIDVLRESSDKAKKLEAQV----ETYKKKLED-----------LN 328
Query: 1518 QLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSD 1577
L++ + ++L+ER A + Q L+ + + + KR++++L
Sbjct: 329 DLRR-------QVKLLEER----NAMYMQNTVQLEEELKKANAARGQLETYKRQVQELHA 377
Query: 1578 AHTQESNKMAQAQQTMRALQEEKYAL----ETKLSQTKAAANSQNELEVKEVARAGLESQ 1633
++ES K + + + L+E+ AL E L++ + + EL + + L
Sbjct: 378 KLSEESKKADKLEFEYKRLEEKLEALQKEKERLLAERDSLRETNEELRCGQAQQDQLTQA 437
Query: 1634 LRMSQWPSESPMNGGDSEEITKLCRE--RSELRNKLENLHDKIQMLRDQLNSEIKRRQ 1689
+ G S L E SE R KL L + +MLR R
Sbjct: 438 ------------DAGTSPSGDNLAAELLPSEYREKLIRLQHENKMLRLGQEGSENERI 483
Score = 33.2 bits (76), Expect = 1.5
Identities = 92/414 (22%), Positives = 170/414 (41%), Gaps = 36/414 (8%)
Query: 1291 ERDDLKAMTQALKREIKDLSDAHTQESNKMAQ----AQQTMRALQEEKYALETKLSQTKA 1346
R+ + Q LK+ ++DL +A +E +++AQ + + LQEEK +L+ + + +
Sbjct: 163 SRESAGNLDQQLKKALEDLKEAQ-EEKDELAQRCHELDKQVLLLQEEKNSLQQENEKLQE 221
Query: 1347 AANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEE----KSQGDDKLMKCRESGARLDA 1402
+ N Q +K L+ L + EE ++ DD +KC E L A
Sbjct: 222 RLAQLEGSSLGPN---QLGSKKYNLLQSQLEQLQEENFRLEAARDDYRIKCEELEKEL-A 277
Query: 1403 EKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITG 1462
E + DEL+ A L+ + L + + L + ET KL++ + + R +
Sbjct: 278 ELQHRNDELTSLAAESQALKDEIDVLRESSDKAKKLEAQVETYKKKLEDLNDLR-RQVKL 336
Query: 1463 LEERCTSLKTTIDQLNLTLERASAGETEL---RGEIQTLQRNLMDTSLNSQSNCEKLKQL 1519
LEER QL L++A+A +L + ++Q L L + S + + K+L
Sbjct: 337 LEERNAMYMQNTVQLEEELKKANAARGQLETYKRQVQELHAKLSEESKKADKLEFEYKRL 396
Query: 1520 QKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAH 1579
++ L + + EK L D+ + + ELR Q + + + + +L +
Sbjct: 397 EEKLEALQKEKERLLAERDSLRETNEELRCGQAQQDQLTQADAGTSPSGDNLAAELLPSE 456
Query: 1580 TQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQLRMSQ- 1638
+E Q + M L +E S+ + Q LE LE+QLR++
Sbjct: 457 YREKLIRLQHENKMLRLGQEG-------SENERITELQQLLEDANRRNNELETQLRLANQ 509
Query: 1639 -----------WPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQL 1681
G SE+ + L + E +L ++++Q R+Q+
Sbjct: 510 RILELQQQVEDLQKALQEQGSKSEDSSLLKSKLEEHLEQLHEANEELQKKREQI 563
Score = 32.5 bits (74), Expect = 2.9
Identities = 56/280 (20%), Positives = 118/280 (42%), Gaps = 43/280 (15%)
Query: 1282 MQQVAQIE---RERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALE 1338
MQ Q+E ++ + + + KR++++L ++ES K + + + L+E+ AL+
Sbjct: 345 MQNTVQLEEELKKANAARGQLETYKRQVQELHAKLSEESKKADKLEFEYKRLEEKLEALQ 404
Query: 1339 TKLSQTKAAANSQSEAMDQKNEELQ-------HLREKVLTLELTLSNVSEE--------- 1382
+ K ++ +++ + NEEL+ L + + N++ E
Sbjct: 405 ----KEKERLLAERDSLRETNEELRCGQAQQDQLTQADAGTSPSGDNLAAELLPSEYREK 460
Query: 1383 --KSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQ 1440
+ Q ++K+++ + G+ + LQ L R +LE Q L QR+ L Q
Sbjct: 461 LIRLQHENKMLRLGQEGSE-NERITELQQLLEDANRRNNELETQ---LRLANQRILELQQ 516
Query: 1441 EKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQR 1500
+ E LQE+ E + LK+ +++ L A+ + R +I+ L+
Sbjct: 517 QVEDLQKALQEQ--------GSKSEDSSLLKSKLEEHLEQLHEANEELQKKREQIEELEP 568
Query: 1501 NLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTC 1540
+ Q+ K+ +L+ L + + R ++ER
Sbjct: 569 DQD------QNLSRKIAELEAALQKKDEDMRAMEERYKKY 602
Score = 30.9 bits (70), Expect = 8.0
Identities = 88/404 (21%), Positives = 171/404 (42%), Gaps = 40/404 (9%)
Query: 265 SSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIH-TLEARVEE 323
EKD+L + EL QV +L+ E N++ E+++ +ER+ +L + ++
Sbjct: 181 LKEAQEEKDELAQRCHELDKQVLLLQEEKNSLQQENEKLQERLAQLEGSSLGPNQLGSKK 240
Query: 324 ADQNVLLVEEMQQELELLQNTLRDI-ARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSI 382
+ +E++Q+E L+ D + + E ++ R L T A S ++
Sbjct: 241 YNLLQSQLEQLQEENFRLEAARDDYRIKCEELEKELAELQHRNDEL----TSLAAESQAL 296
Query: 383 KPSVTFRKET--KLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVG 440
K + +E+ K Q+ T KK+ E ++ + +QV L++ A Q
Sbjct: 297 KDEIDVLRESSDKAKKLEAQVETYKKKLEDLND----LRRQV----KLLEERNAMYMQNT 348
Query: 441 REKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKL 500
+ E +K R + ++ +E++ + + DK++ RL + E+LQ EK
Sbjct: 349 VQLEEELKKANAARGQLETYKRQVQELHAKLSEESKKADKLEFEYKRLEEKLEALQKEKE 408
Query: 501 FLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKEL--------LE 552
L E D + + ELR + +L + + N LA EL L
Sbjct: 409 RLLAERDSLRETNE----ELRCGQAQQDQLTQADAGTSPSGDN--LAAELLPSEYREKLI 462
Query: 553 QNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLA 612
+ + E + L E S+ + E+++LL D + N ++ + +L+ +++
Sbjct: 463 RLQHENKMLRLGQEGSENERITELQQLLEDANRRNNEL----------ETQLRLANQRIL 512
Query: 613 SLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESL 656
L+ E L+ L + S E S + K +LE +++L E L
Sbjct: 513 ELQQQVEDLQKALQEQGSKSEDSSLLKSKLEEHLEQLHEANEEL 556
>gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein. Members of this
protein family have a signal peptide, a strongly
conserved SH3 domain, a variable region, and then a
C-terminal hydrophobic transmembrane alpha helix region.
Length = 198
Score = 42.3 bits (100), Expect = 7e-04
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Query: 1328 RALQEEKYALET--KLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQ 1385
R L + A E +L Q A + + ++ ELQ +++ TL E +
Sbjct: 56 RYLSDTPSARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQK 115
Query: 1386 GDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQML 1438
++ + + LD E R L++EL+ + LE + L+ ++QR L
Sbjct: 116 ELARIKQLSANAIELDEENRELREELAELKQENEALEAENERLQENEQRRWFL 168
Score = 36.9 bits (86), Expect = 0.051
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 398 REQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEK 457
RE+L ++++ E + +Q+ L + + K +L+ + E E L K + ++
Sbjct: 65 RERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIK--- 121
Query: 458 SALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLF 501
L N E++E L L ++++ N L NE LQ +
Sbjct: 122 -QLSANAIELDEENRELREELAELKQENEALEAENERLQENEQR 164
Score = 35.4 bits (82), Expect = 0.14
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 799 QDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELK 858
D + ++RL ++ +EL E + L ++ + A ++ L+++L+ A+LE L+
Sbjct: 59 SDTPSARERLPELQQELAELQEELAELQEQLAELQQE----NQELKQELSTLEAELERLQ 114
Query: 859 TRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQ 906
K + +L E L E ELK + E + + +Q
Sbjct: 115 KELARIKQLSAN-AIELDEENRELREELAELKQENEALEAENERLQEN 161
Score = 34.6 bits (80), Expect = 0.25
Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Query: 1470 LKTTIDQLNLTLERASAGETELRGEIQTLQ---RNLMDTSLNSQSNCEKLKQLQKLLHSA 1526
L+ + +L L EL+ E Q L+ L Q ++KQL
Sbjct: 71 LQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANAIEL 130
Query: 1527 ENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMT 1565
+ E R L+E L + L + RL+ + +
Sbjct: 131 DEENRELREELAELKQENEAL-EAENERLQENEQRRWFL 168
Score = 34.2 bits (79), Expect = 0.31
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 267 ATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQ 326
E +L +E +EL+ Q+ L+ EN + E E +E L K + ++ A +
Sbjct: 70 ELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANAIE 129
Query: 327 NVLLVEEMQQELELLQNTLRDIARAVIQDAEG 358
E+++EL L+ A + +
Sbjct: 130 LDEENRELREELAELKQENEA-LEAENERLQE 160
Score = 33.8 bits (78), Expect = 0.44
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 602 KELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQES-----L 656
+EL LQE+LA L+ L+ + + L + + E+L+ E+ + KQ S L
Sbjct: 73 QELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARI--KQLSANAIEL 130
Query: 657 KGQVVRLNKELEDTEKRAQETKASL 681
+ L +EL + ++ + +A
Sbjct: 131 DEENRELREELAELKQENEALEAEN 155
Score = 33.8 bits (78), Expect = 0.51
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 650 LVKQESLKGQVVRLNKELEDTEKRAQETK---ASLVQQASGLDADYQNQISNLKKQNEEC 706
L S + ++ L +EL + ++ E + A L Q+ L + + L++ +E
Sbjct: 58 LSDTPSARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKEL 117
Query: 707 VT--KLTEEKINLKKQNEECVTKLTEEKEQVRAA 738
+L+ I L ++N E +L E K++ A
Sbjct: 118 ARIKQLSANAIELDEENRELREELAELKQENEAL 151
Score = 33.1 bits (76), Expect = 0.81
Identities = 15/91 (16%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
+++ ++++E +L+ L+ ++ +L + + +++ + + LQ+E ++ +LS
Sbjct: 66 ERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIK-QLS 124
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLE 1373
+ ++ + EEL L+++ LE
Sbjct: 125 ANAIELDEENREL---REELAELKQENEALE 152
Score = 31.9 bits (73), Expect = 1.8
Identities = 16/69 (23%), Positives = 33/69 (47%)
Query: 235 QDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENN 294
Q+L + S L ++ + LSA + + E +L +E +ELK + L++EN
Sbjct: 97 QELKQELSTLEAELERLQKELARIKQLSANAIELDEENRELREELAELKQENEALEAENE 156
Query: 295 AMANESKQK 303
+ +++
Sbjct: 157 RLQENEQRR 165
Score = 31.9 bits (73), Expect = 2.2
Identities = 21/106 (19%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 413 ESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVE 472
S+Y S +L + + +LA++ E L + + L+ E L++ + +E
Sbjct: 54 LSRYLSDT--PSARERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELE 111
Query: 473 SLNSNLDKVQK---NNSRLSKINESLQSEKLFLQNELDRINSDMDA 515
L L ++++ N L + N L+ E L+ E + + ++ +
Sbjct: 112 RLQKELARIKQLSANAIELDEENRELREELAELKQENEALEAENER 157
Score = 31.9 bits (73), Expect = 2.2
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 604 LQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRL 663
L LQ++LA L+ + L+ L + Q ++ + LE E++ L + +K Q+
Sbjct: 68 LPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIK-QLSAN 126
Query: 664 NKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQ 702
EL++ + +E A L Q+ L+A+ + N +++
Sbjct: 127 AIELDEENRELREELAELKQENEALEAENERLQENEQRR 165
Score = 31.5 bits (72), Expect = 2.5
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Query: 1405 RALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCR---NIT 1461
LQ EL+ + + +L+ Q L+ + Q L+ L E L +LQ+ + N
Sbjct: 69 PELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSANAI 128
Query: 1462 GLEERCTSLKTTIDQLNLTLERASAGETELRGEIQ 1496
L+E L+ + +L E A L+ Q
Sbjct: 129 ELDEENRELREELAELKQENEALEAENERLQENEQ 163
Score = 30.7 bits (70), Expect = 4.2
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 1514 EKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKR--- 1570
E+L +LQ+ L + E LQE+L Q EL+++ + L+ +K+
Sbjct: 66 ERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQLSA 125
Query: 1571 EIKDLSDAHTQESNKMAQAQQTMRALQEEKYALE 1604
+L + + + ++A+ +Q AL+ E L+
Sbjct: 126 NAIELDEENRELREELAELKQENEALEAENERLQ 159
Score = 30.7 bits (70), Expect = 4.5
Identities = 18/97 (18%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 572 VEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSH 631
++ E+ L + +++ EQ+++ + + +EL L+ +L L+ + ++ + ++
Sbjct: 71 LQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIKQL----SAN 126
Query: 632 LEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELE 668
+ D + +L E+ EL + E+L+ + RL + +
Sbjct: 127 AIELDEENRELREELAELKQENEALEAENERLQENEQ 163
Score = 30.0 bits (68), Expect = 8.2
Identities = 15/93 (16%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 1549 RQQVNRLENQ-DDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKL 1607
R+++ L+ + +L+ L+ ++ +L + + +++ + + LQ+E ++ +L
Sbjct: 65 RERLPELQQELAELQEELAELQEQLAELQQENQELKQELSTLEAELERLQKELARIK-QL 123
Query: 1608 SQTKAAANSQN-----ELEVKEVARAGLESQLR 1635
S + +N EL + LE++
Sbjct: 124 SANAIELDEENRELREELAELKQENEALEAENE 156
Score = 30.0 bits (68), Expect = 9.2
Identities = 21/109 (19%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 842 TLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVD 901
+ RE+L +L EL+ E L+ ++++L+ E + L E L+ +L +++
Sbjct: 63 SARERLPELQQELAELQEELAE----LQEQLAELQQENQELKQELSTLEAEL----ERLQ 114
Query: 902 TVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNK 950
A++ + + E + LR++L + K E ++ ++ +
Sbjct: 115 KELARIKQLSANAIELDEENRELREELAELKQENEALEAENERLQENEQ 163
>gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with
the myosin-like domain [Function unknown].
Length = 499
Score = 43.9 bits (103), Expect = 8e-04
Identities = 34/195 (17%), Positives = 77/195 (39%), Gaps = 10/195 (5%)
Query: 1267 IDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQT 1326
I +R + + E ER+ ++ Q ++E + + +A+AQQ
Sbjct: 79 IRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAARQNLAKAQQE 138
Query: 1327 MRALQEEKYALETKLSQ---TKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEK 1383
+ L ++ L+T+L + +Q++++ ++LQ ++ + L L S +
Sbjct: 139 LARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQVLDLKLRSAQI 198
Query: 1384 SQGDDKLMKCRESG-------ARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQ 1436
Q L + AR A + + + +A++++ Q A + +
Sbjct: 199 EQEAQNLATRANAAQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQIAARAEQIRERE 258
Query: 1437 MLLQEKETNLHKLQE 1451
LQ ET +L++
Sbjct: 259 RQLQRLETAQARLEQ 273
Score = 43.5 bits (102), Expect = 0.001
Identities = 39/206 (18%), Positives = 82/206 (39%), Gaps = 3/206 (1%)
Query: 421 QVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDK 480
Q+ + QL + +L EK A E R E + + + + + + NL K
Sbjct: 75 QLDDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAARQNLAK 134
Query: 481 VQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLR-EDLLIANE 539
Q+ +RL+K + LQ+ L + ++ + + + + + +L+ + L +
Sbjct: 135 AQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQVLDLKLR 194
Query: 540 DLKNAKLAKELLEQNK--EEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITI 597
+ + A+ L + + LA + +++ S +QI+ I
Sbjct: 195 SAQIEQEAQNLATRANAAQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQIAARAEQI 254
Query: 598 EANDKELQRLQEQLASLRSDKESLEA 623
+++LQRL+ A L + LEA
Sbjct: 255 RERERQLQRLETAQARLEQEVAQLEA 280
Score = 41.5 bits (97), Expect = 0.004
Identities = 40/222 (18%), Positives = 95/222 (42%), Gaps = 25/222 (11%)
Query: 1279 RNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALE 1338
RNL V Q+ DD++ +AL+ E+ + A+ ++ ++E+ A+
Sbjct: 67 RNLRSGVFQL----DDIRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVR 122
Query: 1339 TKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGA 1398
+L+ + + + + ++ Q L+ + L ++E++ Q
Sbjct: 123 QELAAARQNLAKAQQELARLTKQAQDLQTR-------LKTLAEQRRQ------------- 162
Query: 1399 RLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCR 1458
L+A+ ++LQ + +A T+L+ Q + L+ +++ Q T + Q R E R
Sbjct: 163 -LEAQAQSLQASQKQLQASATQLKSQVLDLKLRSAQIEQEAQNLATRANAAQARTEELAR 221
Query: 1459 NITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQR 1500
++ +++ Q++ ++ +A ++R + LQR
Sbjct: 222 RAAAAQQTAQAIQQRDAQISQKAQQIAARAEQIRERERQLQR 263
Score = 40.8 bits (95), Expect = 0.007
Identities = 45/239 (18%), Positives = 88/239 (36%), Gaps = 5/239 (2%)
Query: 232 ATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKS 291
A Q+L+K + +L + T+Q L L+ A+ L +L++ T LKS
Sbjct: 127 AARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKS 186
Query: 292 ENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARA 351
+ + S Q E+ + L R + +AR EE + ++ Q ++ + A+
Sbjct: 187 QVLDLKLRSAQIEQEAQNLATRANAAQARTEELARRAAAAQQTAQAIQQRDAQISQKAQQ 246
Query: 352 VIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESA 411
+ AE I R L+R T AR + + + ++ T + Q +
Sbjct: 247 IAARAE--QIRERERQLQRLETAQARLEQEVAQLEAYYQAYV-RLRQQAAATQRGQVLAG 303
Query: 412 DESQYNMSQQVTSLTSQLDQTKAQLA--QVGREKEALVKNIEMLRVEKSALEKNKREIN 468
+ +Q +QL + + A ++ R + + R R+
Sbjct: 304 AAQRVAQAQAQAQAQAQLLSSANRPAALRLRRSPRRGRRQRPVTRHTTRRRRPATRQSP 362
Score = 35.4 bits (81), Expect = 0.26
Identities = 41/240 (17%), Positives = 90/240 (37%), Gaps = 22/240 (9%)
Query: 534 LLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKY 593
L + N +L++ + + ++T L + K E E R ++ K
Sbjct: 62 LFLLNRNLRSGVFQLDDIRPQLRALRTELGTAQGEKRAAETE-------REAARSELQKA 114
Query: 594 EITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQ 653
EA +EL ++ LA + + L D Q+ L+ ++ QLE + Q L Q
Sbjct: 115 RQEREAVRQELAAARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQ 174
Query: 654 ESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKK--QNEECVTKLT 711
+ L+ +L ++ D + R+ + ++Q + A N + + T
Sbjct: 175 KQLQASATQLKSQVLDLKLRSAQ-----IEQEAQNLATRANAAQARTEELARRAAAAQQT 229
Query: 712 EEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSH 771
+ I + + + + E++L + + +RL+ + QL+++
Sbjct: 230 AQAIQQRDAQISQKAQQIAARAEQIRERERQL--------QRLETAQARLEQEVAQLEAY 281
Score = 34.6 bits (79), Expect = 0.46
Identities = 30/171 (17%), Positives = 70/171 (40%), Gaps = 4/171 (2%)
Query: 1270 DPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRA 1329
+ E VR+ + Q +A+ ++E L Q L+ +K L++ Q + Q + +
Sbjct: 117 EREAVRQELAAARQNLAKAQQELARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQ 176
Query: 1330 LQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDK 1389
LQ L++++ K +S ++Q+ + L L+ + Q
Sbjct: 177 LQASATQLKSQVLDLKL----RSAQIEQEAQNLATRANAAQARTEELARRAAAAQQTAQA 232
Query: 1390 LMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQ 1440
+ + ++ + A +++ E ++ +LE + LE + +L+ Q
Sbjct: 233 IQQRDAQISQKAQQIAARAEQIRERERQLQRLETAQARLEQEVAQLEAYYQ 283
Score = 31.9 bits (72), Expect = 3.3
Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 10/156 (6%)
Query: 1470 LKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENE 1529
++ + L L A + E + + L ++ ++L ++ L A+ E
Sbjct: 79 IRPQLRALRTELGTAQGEKRAAETEREAARSELQKARQEREAVRQELAAARQNLAKAQQE 138
Query: 1530 KRV-------LQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDL---SDAH 1579
LQ RL T +L Q + +Q L+A LK ++ DL S
Sbjct: 139 LARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQVLDLKLRSAQI 198
Query: 1580 TQESNKMAQAQQTMRALQEEKYALETKLSQTKAAAN 1615
QE+ +A +A EE QT A
Sbjct: 199 EQEAQNLATRANAAQARTEELARRAAAAQQTAQAIQ 234
Score = 31.1 bits (70), Expect = 6.2
Identities = 18/121 (14%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 798 QQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEEL 857
+ +A++ L E + + + E ++ Q+R + + +AK ++
Sbjct: 80 RPQLRALRTELGTAQGEKRAAETEREAARSE-LQKARQEREAVRQELAAARQNLAKAQQE 138
Query: 858 KTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEA 917
R ++ L+ ++ L +R L +++ L+ + +++Q+L+ R +
Sbjct: 139 LARLTKQAQDLQTRLKTLAEQRRQLEAQAQSLQASQKQLQASATQLKSQVLDLKLRSAQI 198
Query: 918 E 918
E
Sbjct: 199 E 199
>gnl|CDD|236798 PRK10929, PRK10929, putative mechanosensitive channel protein;
Provisional.
Length = 1109
Score = 43.9 bits (104), Expect = 8e-04
Identities = 76/329 (23%), Positives = 133/329 (40%), Gaps = 71/329 (21%)
Query: 539 EDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIE 598
++L+ AK AK E ++ L + + L +R E+ +Y+ I+
Sbjct: 30 QELEQAKAAKTP--AQAEIVEALQSAL------------NWLEERKGSLERAKQYQQVID 75
Query: 599 ANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKG 658
K L++QL + R + S+ + + LEQ E+L Q S
Sbjct: 76 NFPKLSAELRQQLNNERDEPRSVPPNM--STDALEQ-------------EIL--QVS--S 116
Query: 659 QVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLK 718
Q++ +++ + + RA+E SL Q L +Q E +L E + L+
Sbjct: 117 QLLEKSRQAQQEQDRAREISDSLSQ---------------LPQQQTEARRQLNEIERRLQ 161
Query: 719 KQNEECVTKLTEEKEQVRAALEKKLHATVK-----QITEEKDCELSRLQANLCQLQS-HI 772
T L + + A L A V Q++ EL+RL++ L + +S +
Sbjct: 162 TLGTP-NTPLAQAQLTALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQL 220
Query: 773 DKICQQHEDAL--LRAEGDKQQAL----LIAQQ---------DQKAIQDRLSQVLKELEE 817
D Q + L R + ++AL L+A+Q Q I LSQ L + +
Sbjct: 221 DAYLQALRNQLNSQRQR-EAERALESTELLAEQSGDLPKSIVAQFKINRELSQALNQQAQ 279
Query: 818 EKCTLDRIKRESAGRSEQDRNTINTLREQ 846
+ +R++A ++ Q R +NTLREQ
Sbjct: 280 RMDLIASQQRQAASQTLQVRQALNTLREQ 308
Score = 32.3 bits (74), Expect = 2.9
Identities = 81/397 (20%), Positives = 144/397 (36%), Gaps = 75/397 (18%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
++ Q ++ D+ ++ L++++ + D M+ ALE ++
Sbjct: 65 ERAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMSTD------------ALEQEIL 112
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARL-D 1401
Q + +S Q+ + + + + + L + + ++ + +L L
Sbjct: 113 QVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQ 172
Query: 1402 AEKRALQDELSRTEARVTKLELQRVALEGDQ--------------QRLQMLLQEKETNLH 1447
A+ ALQ E + +A V +LEL +++ Q Q+L LQ L+
Sbjct: 173 AQLTALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQLN 232
Query: 1448 KL-QERCEHQCRNITGLEERCTSLKTTID---QLNLTLERASAGETELRGEIQTLQRNLM 1503
Q E + L E+ L +I ++N L +A Q QR M
Sbjct: 233 SQRQREAERALESTELLAEQSGDLPKSIVAQFKINRELSQALN---------QQAQR--M 281
Query: 1504 D--TSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDL 1561
D S Q+ + L+ Q L N R + L A L E R QV RL
Sbjct: 282 DLIASQQRQAASQTLQVRQAL-----NTLREQSQWLGVSNA-LGEALRAQVARLPE---- 331
Query: 1562 KAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELE 1621
Q L E+ L + + + + Q + Q + L QN +
Sbjct: 332 MPKPQQLDTEMAQLRVQRLRYEDLLNKQPQLRQIRQADGQPLTA----------EQNRI- 380
Query: 1622 VKEVARAGLESQLRMSQWPSESPMNGGDSE--EITKL 1656
L++QLR + S ++GGD+ E+TKL
Sbjct: 381 --------LDAQLRTQRELLNSLLSGGDTLILELTKL 409
Score = 31.2 bits (71), Expect = 7.1
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 26/233 (11%)
Query: 1490 ELRGEIQTLQRNLMDTSLNSQSNC--EKLKQLQKLLHSAENEKRVLQERLDTCQASLAEL 1547
ELR ++ + N ++ +++ Q+ L + + Q+R SL++L
Sbjct: 83 ELRQQLNNERDEPRSVPPNMSTDALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQL 142
Query: 1548 RRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKL 1607
+QQ + + + + +R ++ L +T +AQAQ T ALQ E AL+ +
Sbjct: 143 PQQQT------EARRQLNEI-ERRLQTLGTPNT----PLAQAQLT--ALQAESAALKALV 189
Query: 1608 SQTKAAANSQN----------ELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLC 1657
+ + A S N EL K + Q +Q S+ + E T+L
Sbjct: 190 DELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQREAERALESTELL 249
Query: 1658 RERS-ELRNKLENLHDKIQMLRDQLNSEIKRRQLYIYRDTRAGKEMQQLRQAL 1709
E+S +L + + L LN + +R L + +A + Q+RQAL
Sbjct: 250 AEQSGDLPKSIVAQFKINRELSQALNQQAQRMDLIASQQRQAASQTLQVRQAL 302
>gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division
and chromosome partitioning].
Length = 420
Score = 42.8 bits (101), Expect = 0.001
Identities = 44/272 (16%), Positives = 93/272 (34%), Gaps = 9/272 (3%)
Query: 418 MSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSN 477
+ + QL Q + ++A + ++ L + +LE EI + L
Sbjct: 29 AAFSAAADDKQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLET---EIASLEAQLIET 85
Query: 478 LDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIA 537
D ++K +++ +N L + ++ + + R+ + A + R ED +
Sbjct: 86 ADDLKKLRKQIADLNARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPEDAQRS 145
Query: 538 NEDLKN-AKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEIT 596
L E+ TL + + ++ AE L S+ Q +K
Sbjct: 146 VRLAIYYGALNPARAERIDALKATL-KQLAAVRAEIAAEQAELTTLLSEQRAQQAKLAQL 204
Query: 597 IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESL 656
+E K L +L +L++ + E L A +S L+ E + +E E+
Sbjct: 205 LEERKKTLAQLNSELSADQKKLEELRA----NESRLKNEIASAEAAAAKAREAAAAAEAA 260
Query: 657 KGQVVRLNKELEDTEKRAQETKASLVQQASGL 688
+ + + + L+ G
Sbjct: 261 AARARAAEAKRTGETYKPTAPEKMLISSTGGF 292
Score = 41.2 bits (97), Expect = 0.004
Identities = 47/271 (17%), Positives = 109/271 (40%), Gaps = 33/271 (12%)
Query: 583 RSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQL 642
+ ++I+ E I + +L++QL SL ++ SLEA L +T L++ + L
Sbjct: 40 LKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQIADL 99
Query: 643 EHEVQELLVKQESLKGQVVRL-----------NKELEDTEKRAQETKASLVQQASGLDAD 691
+ L V++ + ++ L + + AQ + + + A
Sbjct: 100 NARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYGALNPAR 159
Query: 692 YQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQIT 751
+ +I LK ++ L + + + E T L+E++ Q +A L + L
Sbjct: 160 AE-RIDALKATLKQ----LAAVRAEIAAEQAELTTLLSEQRAQ-QAKLAQLL-------- 205
Query: 752 EEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQV 811
EE+ L++L + L Q ++++ ++ L+ E +A ++ A + +
Sbjct: 206 EERKKTLAQLNSELSADQKKLEELRAN--ESRLKNEIASAEAAAAKAREAAAAAEAAAAR 263
Query: 812 LKELEEEKCTLDRIKRESAGRSEQDRNTINT 842
+ E ++ E+ + ++ I++
Sbjct: 264 ARAAEAKR------TGETYKPTAPEKMLISS 288
Score = 38.2 bits (89), Expect = 0.040
Identities = 57/282 (20%), Positives = 103/282 (36%), Gaps = 35/282 (12%)
Query: 1336 ALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRE 1395
A + +L Q + + + + ++ ++ L +++ +LE ++++ + + D L K R+
Sbjct: 35 ADDKQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRK 94
Query: 1396 SGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEH 1455
A L+A AL+ + R+ + L + G +L+ E +
Sbjct: 95 QIADLNARLNALEVQEREQRRRLAEQ-LAALQRSGRNPPPALLV---------SPEDAQR 144
Query: 1456 QCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEK 1515
R + ID L TL++ +A E+ E L L E+
Sbjct: 145 SVRLAIYYGALNPARAERIDALKATLKQLAAVRAEIAAEQAELTTLLS----------EQ 194
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDL 1575
Q KL ++L+ER T +EL Q +LE +L+A LK EI
Sbjct: 195 RAQQAKL-------AQLLEERKKTLAQLNSELSADQ-KKLE---ELRANESRLKNEIASA 243
Query: 1576 SDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQ 1617
A + A A A A E K + +
Sbjct: 244 EAAAAKAREAAAAA----EAAAARARAAEAKRTGETYKPTAP 281
Score = 35.5 bits (82), Expect = 0.23
Identities = 35/210 (16%), Positives = 75/210 (35%), Gaps = 12/210 (5%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
+++A +E++ + + L++++K L ++ + ++ L+++ L +L+
Sbjct: 45 KEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQIADLNARLN 104
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKC--------R 1394
+ Q + ++ LQ L VS E +Q +L
Sbjct: 105 ALEVQEREQRRRLAEQLAALQRSGRNPPPALL----VSPEDAQRSVRLAIYYGALNPARA 160
Query: 1395 ESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCE 1454
E L A + L + A +L Q +L LL+E++ L +L
Sbjct: 161 ERIDALKATLKQLAAVRAEIAAEQAELTTLLSEQRAQQAKLAQLLEERKKTLAQLNSELS 220
Query: 1455 HQCRNITGLEERCTSLKTTIDQLNLTLERA 1484
+ + L + LK I +A
Sbjct: 221 ADQKKLEELRANESRLKNEIASAEAAAAKA 250
Score = 33.9 bits (78), Expect = 0.82
Identities = 38/208 (18%), Positives = 84/208 (40%), Gaps = 13/208 (6%)
Query: 833 SEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQ 892
++ I L + + + ++ + + E++ LE +I+ L+++ + ++L+ Q
Sbjct: 36 DDKQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRKQ 95
Query: 893 LHLSEDKVDTVQAQLLETARRLKE----AENVGESLRKDLLDTKTHLADSNFEKDKYAKS 948
+ +++ ++ Q E RRL E + G + LL + S Y
Sbjct: 96 IADLNARLNALEVQEREQRRRLAEQLAALQRSGRNPPPALLVSPEDAQRSVRLAIYYGAL 155
Query: 949 NKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELL 1008
N E + +++ + A +IA E+ L L++Q A L + L
Sbjct: 156 NPARAERIDALKATLKQLAAV----RAEIAA-----EQAELTTLLSEQRAQQAKLAQLLE 206
Query: 1009 QAEQIRLDLDSEKVTLQEKCKFLEIEKE 1036
+ ++ L+SE Q+K + L +
Sbjct: 207 ERKKTLAQLNSELSADQKKLEELRANES 234
Score = 32.8 bits (75), Expect = 1.9
Identities = 54/285 (18%), Positives = 89/285 (31%), Gaps = 52/285 (18%)
Query: 1141 QLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDR 1200
QL+ +K++ I + A L L E E+A + AQ
Sbjct: 39 QLKQIQKEIAALEKKIREQQDQRAKLEKQ----LKSLETEIASLEAQLIETAD------- 87
Query: 1201 SSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGG 1260
DL++ R + L A E R+Q RL QL A G+ P
Sbjct: 88 --DLKKLRKQIADLNARLNALEVQEREQRRRLAEQLA--ALQRSGRNPPP---------- 133
Query: 1261 EGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKM 1320
+ V PE ++ VR + A+ A I L
Sbjct: 134 -----ALLVSPEDAQRSVRLAIY-----------YGALNPARAERIDAL----------- 166
Query: 1321 AQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVS 1380
+ + A++ E A + +L+ + +Q + Q EE + ++ +
Sbjct: 167 KATLKQLAAVRAEIAAEQAELTTLLSEQRAQQAKLAQLLEERKKTLAQLNSELSADQKKL 226
Query: 1381 EEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQR 1425
EE + +L S A+ R AR E +R
Sbjct: 227 EELRANESRLKNEIASAEAAAAKAREAAAAAEAAAARARAAEAKR 271
Score = 32.0 bits (73), Expect = 3.2
Identities = 54/291 (18%), Positives = 107/291 (36%), Gaps = 44/291 (15%)
Query: 599 ANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKG 658
A+DK+L+++Q+++A+L + + L+ + + LE ++ E + L+
Sbjct: 35 ADDKQLKQIQKEIAALEKKIREQQDQRAKLEKQLKSLETEIASLEAQLIETADDLKKLRK 94
Query: 659 QVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLK 718
Q+ LN L E + +E + L +Q L A ++ N ++ E
Sbjct: 95 QIADLNARLNALEVQEREQRRRLAEQ---LAALQRSGR------NPPPALLVSPEDA--- 142
Query: 719 KQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQ 778
Q + RA L AT+KQ+ +
Sbjct: 143 -QRSVRLAIYYGALNPARAERIDALKATLKQLAAVR------------------------ 177
Query: 779 HEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRN 838
A + AE + LL Q+ Q Q +L+Q+L+E ++ L+ + E+ R
Sbjct: 178 ---AEIAAEQAELTTLLSEQRAQ---QAKLAQLLEERKKTLAQLNSELSADQKKLEELRA 231
Query: 839 TINTLREQLNRTVAKL-EELKTRTEEEKAILERKISDLKSEREALVTESEE 888
+ L+ ++ A + + E A + ++ K E + E
Sbjct: 232 NESRLKNEIASAEAAAAKAREAAAAAEAAAARARAAEAKRTGETYKPTAPE 282
>gnl|CDD|225638 COG3096, MukB, Uncharacterized protein involved in chromosome
partitioning [Cell division and chromosome partitioning].
Length = 1480
Score = 42.6 bits (100), Expect = 0.002
Identities = 68/316 (21%), Positives = 124/316 (39%), Gaps = 38/316 (12%)
Query: 1278 VRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYAL 1337
V+ ++Q +IER + DL+ +T L+ + + + +A+ ++ A+A+ + E L
Sbjct: 340 VQTALRQQEKIERYQADLEELTIRLEEQNEVVEEANERQEENEARAEAA----ELEVDEL 395
Query: 1338 ETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTL----ELTLSNVSEEKSQGDDKLMKC 1393
+++L+ + A + Q Q + + L E+ L +LT + E K +
Sbjct: 396 KSQLADYQQALDVQQTRAIQYQQAIAAL-ERAKELCHLPDLTADSAEEWLETFQAKEEEA 454
Query: 1394 RESGARL-------DAEKR----------ALQDELSRTEARVTKLELQRVALEGDQQRLQ 1436
E L A A+ EL+R+EA EL R DQ+ L
Sbjct: 455 TEKLLSLEQKMSMAQAAHSQFEQAYQLVVAIAGELARSEAWDVARELLREGP--DQRHLA 512
Query: 1437 MLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQ 1496
+Q L +L++R Q L + C +D L EL I+
Sbjct: 513 EQVQPLRMRLSELEQRLRQQQSAERLLADFCKRQGKNLDAEELEALHQ-----ELEALIE 567
Query: 1497 TLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLE 1556
+L ++ + + ++ +QLQ + +R Q +L +L Q
Sbjct: 568 SLSDSVSNAREQRMALRQEQEQLQSRI--QSLMQRA--PVWLAAQNALEQLSEQSGEEFT 623
Query: 1557 N-QDDLKAMTQALKRE 1571
+ QD + M Q L+RE
Sbjct: 624 DSQDVTEYMQQLLERE 639
Score = 32.2 bits (73), Expect = 3.2
Identities = 62/290 (21%), Positives = 117/290 (40%), Gaps = 36/290 (12%)
Query: 1078 NVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVRASSA 1137
N+V+ R ++K E R +LE+L EE+ V+ + R E R A+
Sbjct: 338 NLVQTALRQQEKIE-------RYQADLEELTIRLEEQNEVVEEANERQEENEARAEAAEL 390
Query: 1138 HLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYKSMDCH 1197
+ +L++ D + L +++ A++Y E+ EL CH
Sbjct: 391 EVDELKSQLADYQQALD-----VQQTRAIQYQQAIAALERAKEL--------------CH 431
Query: 1198 TDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPV 1257
DL A + +A+E+ +++ LE ++ A A + + +
Sbjct: 432 L---PDLTADSAEEWLET--FQAKEEEATEKLLSLEQKMS-MAQAAHSQFEQAYQLVVAI 485
Query: 1258 RGGEGGEGLIDVDPEIVRKGV--RNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQ 1315
G DV E++R+G R+L +QV + +L+ + + + L+D +
Sbjct: 486 AGELARSEAWDVARELLREGPDQRHLAEQVQPLRMRLSELEQRLRQQQSAERLLADFCKR 545
Query: 1316 ESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHL 1365
+ + + AL +E AL LS + + A Q A+ Q+ E+LQ
Sbjct: 546 QGKNLDAE--ELEALHQELEALIESLSDSVSNAREQRMALRQEQEQLQSR 593
>gnl|CDD|114219 pfam05483, SCP-1, Synaptonemal complex protein 1 (SCP-1).
Synaptonemal complex protein 1 (SCP-1) is the major
component of the transverse filaments of the synaptonemal
complex. Synaptonemal complexes are structures that are
formed between homologous chromosomes during meiotic
prophase.
Length = 787
Score = 42.4 bits (99), Expect = 0.003
Identities = 70/357 (19%), Positives = 161/357 (45%), Gaps = 16/357 (4%)
Query: 1270 DPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRA 1329
+ E ++K ++ ++ Q E + + + + +A ++ I++L + + S K+ + Q +
Sbjct: 86 EAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKD 145
Query: 1330 LQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTL----ELTLSNVSEEKSQ 1385
L +E A + K +E + E + R+ + L E + E + Q
Sbjct: 146 LIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQ 205
Query: 1386 GDDKLM----KCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQE 1441
++ + K +E ++ + + E++ E +V+ L +Q E + L LL+E
Sbjct: 206 AENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEE 265
Query: 1442 KETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRN 1501
++L+E+ + Q N+ L E+ L ++ + ++L+R+ + + L ++Q +
Sbjct: 266 SRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKT 325
Query: 1502 LMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLE-NQDD 1560
+ + ++ E+L + A+ + + SL EL R + RLE N+D
Sbjct: 326 ICQLTEEKEAQMEELNK-------AKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQ 378
Query: 1561 LKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQ 1617
LK +T L+++ +L + ++NK + ++ + L E++ L+ K K A +
Sbjct: 379 LKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELK 435
Score = 32.4 bits (73), Expect = 2.7
Identities = 52/275 (18%), Positives = 128/275 (46%), Gaps = 24/275 (8%)
Query: 394 LATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEML 453
L +++H ++ Q + S+ + ++V L ++L++ K + + L + + L
Sbjct: 445 LQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIE-------LTAHCDKL 497
Query: 454 RVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDM 513
+E L + ++ ++ ++ +K R+ K E+L+ +++ L++EL+ + +
Sbjct: 498 LLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEF 557
Query: 514 DAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVE 573
+ E++ K D + E+ ++ + ++LE ++ + + K+ ++
Sbjct: 558 IQKGDEVKCKLD---KSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELH 614
Query: 574 AEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLE 633
E + L S N+Q++ YEI + + EL S K+ E I+ + Q +E
Sbjct: 615 QENKALKKKGSAENKQLNAYEIKVNKLELELA----------SAKQKFEEIIDNYQKEIE 664
Query: 634 QSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELE 668
+ +E+L EV+ K +++ + V+L KE++
Sbjct: 665 DKKISEEKLLEEVE----KAKAIADEAVKLQKEID 695
>gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional.
Length = 895
Score = 42.2 bits (99), Expect = 0.003
Identities = 85/537 (15%), Positives = 203/537 (37%), Gaps = 37/537 (6%)
Query: 428 QLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSR 487
+L+ K Q+A + +K IE L +E + + + + L+S D + S
Sbjct: 198 ELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESE 257
Query: 488 LSKINESLQSEKL---FLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA 544
+ L E + + +R ++ + R + + + D+ + L N
Sbjct: 258 IKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSNI 317
Query: 545 KLAKELLEQNKEEMQTLLA------HIEKSKGDVEAEMERLLLDRSDMNEQISKYE---I 595
+++ L + D+ ++ L D N + E
Sbjct: 318 DAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKK 377
Query: 596 TIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQES 655
IE K ++R+ ++ + +E + + L + +VK + + +V L + +
Sbjct: 378 KIEEYSKNIERMSAFISEILKIQEIDPDAI---KKELNEINVKLQDISSKVSSLNQRIRA 434
Query: 656 LKGQV--VRLNKELEDTEKRAQETKASLVQQASG-LDADYQNQISNLK---KQNEECVTK 709
L+ + + N E+ + + +L ++ S + Y + S L+ ++ E V
Sbjct: 435 LRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKD 494
Query: 710 LTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQ 769
+ E+ ++LKK+ E ++ + +E + + K +++ L+ + +
Sbjct: 495 IDEKIVDLKKRKEYLESEEINKSINEYNKIESARA----DLEDIKI-KINELKDKHDKYE 549
Query: 770 SHIDKICQQHEDALLRAEGDKQQAL-LIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRE 828
++ + L AL +I+ D + + R +++ K+L + + L I+
Sbjct: 550 EIKNRYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIG 609
Query: 829 SAGRSEQDRNTINTLREQLNRTVAK---LEELKTRTEEEKAILERKISDLK---SEREAL 882
+I + + N K ++E K E+ L KI + K +E +++
Sbjct: 610 FPDDKSYIDKSIREIENEANNLNNKYNEIQENKILIEK----LRGKIDNYKKQIAEIDSI 665
Query: 883 VTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSN 939
+ + +E+ +++ ED + + L + E+ E LR + + + D N
Sbjct: 666 IPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDIN 722
Score = 38.0 bits (88), Expect = 0.053
Identities = 92/563 (16%), Positives = 204/563 (36%), Gaps = 57/563 (10%)
Query: 289 LKSENNAMANESKQ---KEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTL 345
LKS N + N KQ E+ LK I L A + ++ EL L++
Sbjct: 192 LKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMK 251
Query: 346 R-----------DIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKL 394
D++ + ++ K++ R + + R I ++ + +
Sbjct: 252 NRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNR--NYINDYFKYKND--I 307
Query: 395 ATHREQLHTMKKQYESAD---------ESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEA 445
++ L + + + YN + S L+ +L + +
Sbjct: 308 ENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNS 367
Query: 446 LVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNE 505
+K+IE L K +E+ + I M ++ L + + + K + +
Sbjct: 368 YLKSIESL---KKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINV-------K 417
Query: 506 LDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHI 565
L I+S + + +R + L ++ + N L E E+ ++ H
Sbjct: 418 LQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGE---EKSNHIINHY 474
Query: 566 EKSKGDVEAEMERLLLDRSDMNEQISKYEITIE-ANDKELQRLQEQLASLRSDKESLEAI 624
+ K +E ++ + ++ D++E+I + E +E+ + + + S + LE I
Sbjct: 475 NEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDI 534
Query: 625 LFDTQSHLEQSDVKKEQLEHEVQELLV------KQESLKGQVVRLNKELEDTEKRAQETK 678
+ L+ K E++++ + L + + L V ++E R+ E K
Sbjct: 535 K-IKINELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIK 593
Query: 679 ASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAA 738
L S L + + + K ++ + ++ E NL + +E + +
Sbjct: 594 KQLNDLESRLQ-EIEIGFPDDKSYIDKSIREIENEANNLNNK-----YNEIQENKILIEK 647
Query: 739 LEKKLHATVKQITEEKDCE--LSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLI 796
L K+ KQI E L + + + ++ ++ K + +DA + + I
Sbjct: 648 LRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRAR-LESTIEI 706
Query: 797 AQQDQKAIQDRLSQVLKELEEEK 819
+ + DR++ + + LE K
Sbjct: 707 LRTRINELSDRINDINETLESMK 729
Score = 35.3 bits (81), Expect = 0.35
Identities = 87/570 (15%), Positives = 203/570 (35%), Gaps = 84/570 (14%)
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR 662
+L+ +L +++ E T + E+L E + +LK +
Sbjct: 191 KLKSSNLELENIKKQIADDEKSHSITLK-------EIERLSIEYNNAMDDYNNLKSALNE 243
Query: 663 LNKELEDTEKRAQETKAS---------LVQQASGLDADYQNQISNLKKQNEECVT---KL 710
L+ + + E K + L+ + I++ +N + K
Sbjct: 244 LSSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKY 303
Query: 711 TEEKINLKK---------QNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRL 761
+ N K+ + K ++ KK K ++ + ++ L
Sbjct: 304 KNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKK-----KSRYDDLNNQILEL 358
Query: 762 QANLCQLQSHIDKICQ------QHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQV---L 812
+ S++ I ++ + R + L I + D AI+ L+++ L
Sbjct: 359 EGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKL 418
Query: 813 KELEEEKCTLDRIKRESAGRSEQDRNTINTLR--------------EQLNRTVAKLEELK 858
+++ + +L++ R ++ + L E+ N + E K
Sbjct: 419 QDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHIINHYNEKK 478
Query: 859 TRTEEEKAILERKISDLKSEREALVTESEEL---KVQLHLSED-KVDTVQAQL---LETA 911
+R EE+ +E ++ D+ + L E L ++ ++E K+++ +A L
Sbjct: 479 SRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKI 538
Query: 912 RRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDL--REMVKKVESEKRDQART 969
LK+ + E ++ K DS A + L E + +E + Q
Sbjct: 539 NELKDKHDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLND 598
Query: 970 IDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASL--KKELLQAEQIRLDLDSEKVTLQEK 1027
++ LQ+I + F DD+ + + + N+ +L K +Q +I ++ L+ K
Sbjct: 599 LESRLQEIEIGFPDDKSY-IDKSIREIENEANNLNNKYNEIQENKILIE------KLRGK 651
Query: 1028 CKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLK 1087
+ + + + + +L ++T +D+ L ++ ++ + ARL+
Sbjct: 652 IDNYKKQIAEID----------SIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLE 701
Query: 1088 QKYEQSVEMNNRVNKNLEDLVKECEEKEVV 1117
E N ++ + D+ + E + +
Sbjct: 702 STIEILRTRINELSDRINDINETLESMKKI 731
Score = 35.3 bits (81), Expect = 0.42
Identities = 44/274 (16%), Positives = 103/274 (37%), Gaps = 20/274 (7%)
Query: 1278 VRNLMQQVAQIERERDDLKAMTQAL-KREIKDLSDAHTQESNKMAQAQQTMRALQEEKYA 1336
+R + +V I+ + DLK + L EI + + + + A + + E K
Sbjct: 485 IREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELKDK 544
Query: 1337 LETKLSQTKAAANS-QSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRE 1395
K + K S + E +D K + + +L ++ +S+ ++ + +
Sbjct: 545 -HDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVI-----SLIDIETNRSRSNEIKKQLND 598
Query: 1396 SGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEH 1455
+RL + D+ S + + ++E + L +QE + + KL+ + ++
Sbjct: 599 LESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYN----EIQENKILIEKLRGKIDN 654
Query: 1456 QCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEK 1515
+ I ++ LK ++N + + R + + N +S E
Sbjct: 655 YKKQIAEIDSIIPDLKEITSRINDIEDNLK----KSRKALDDAKANRARL----ESTIEI 706
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQASLAELRR 1549
L+ L N+ E + + ++ +L+R
Sbjct: 707 LRTRINELSDRINDINETLESMKKIKKAIGDLKR 740
Score = 33.7 bits (77), Expect = 1.2
Identities = 63/364 (17%), Positives = 139/364 (38%), Gaps = 60/364 (16%)
Query: 1274 VRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMR---AL 1330
+ + +++ ++ I+++ D + +EI+ LS + + + + +L
Sbjct: 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSL 247
Query: 1331 QEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLE--------------LTL 1376
++ K E+++ A S +KN + L E+ + +
Sbjct: 248 EDMKNRYESEI----KTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYINDYFKY 303
Query: 1377 SNVSEEKSQ---GDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQ 1433
N E K Q D + + + + + ++ + ++R L Q + LEG +
Sbjct: 304 KNDIENKKQILSNIDAEINKYHAIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGYEM 363
Query: 1434 RLQMLLQEKET------NLHKLQERCEHQCRNITGLEERCTS-LKTTIDQLNLTLERASA 1486
L+ E+ K ER I ++E +K ++++N+ L+ S+
Sbjct: 364 DYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISS 423
Query: 1487 GETELRGEIQTLQRNLMDTS-----LNSQSNC--------------------EKLKQLQK 1521
+ L I+ L+ NL + S LN QS C EK +L++
Sbjct: 424 KVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEE 483
Query: 1522 LLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQD----DLKAMTQALKREIKDLSD 1577
+ E E + + E++ + L +++N+ N+ +A + +K +I +L D
Sbjct: 484 KIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELKD 543
Query: 1578 AHTQ 1581
H +
Sbjct: 544 KHDK 547
>gnl|CDD|222878 PHA02562, 46, endonuclease subunit; Provisional.
Length = 562
Score = 41.5 bits (98), Expect = 0.004
Identities = 46/263 (17%), Positives = 113/263 (42%), Gaps = 35/263 (13%)
Query: 574 AEMERLLLDR-SDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHL 632
+EM++L D+ ++N+QI D ++ +Q+Q+ + + E
Sbjct: 166 SEMDKLNKDKIRELNQQIQTL-------DMKIDHIQQQIKTYNKNIEEQRK--------- 209
Query: 633 EQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADY 692
++ + +++ EL+ + +++K ++ L EL + ++ A+L + + A
Sbjct: 210 -KNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAA-AKI 267
Query: 693 QNQISNLKK------QNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHAT 746
+++I +K + C T + + + +TK+ ++ ++++ +LEK A
Sbjct: 268 KSKIEQFQKVIKMYEKGGVCPTCTQQ-----ISEGPDRITKIKDKLKELQHSLEKLDTAI 322
Query: 747 VKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAI-Q 805
+ EE E + L +L++ I Q L + K +A + Q +
Sbjct: 323 DEL--EEIMDEFNEQSKKLLELKNKISTNKQSL--ITLVDKAKKVKAAIEELQAEFVDNA 378
Query: 806 DRLSQVLKELEEEKCTLDRIKRE 828
+ L+++ EL++ T + +E
Sbjct: 379 EELAKLQDELDKIVKTKSELVKE 401
Score = 40.0 bits (94), Expect = 0.011
Identities = 32/223 (14%), Positives = 96/223 (43%), Gaps = 13/223 (5%)
Query: 797 AQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEE 856
Q + + ++ + ++++ ++ ++++ + +N + L E+ A++EE
Sbjct: 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEE 238
Query: 857 LKTR---TEEEKAILERKISDLKSEREALVTESEELKVQLHLSED--KVDTVQAQLLETA 911
L + ++ L + + ++ E+ + + + E T Q+ E
Sbjct: 239 LTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCTQQISEGP 298
Query: 912 RRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRD------ 965
R+ + ++ + L+ L T + + D++ + +K L E+ K+ + K+
Sbjct: 299 DRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVD 358
Query: 966 QARTIDEGLQKIAVRFGDDEKQ--ALRNQLNDQSNDVASLKKE 1006
+A+ + ++++ F D+ ++ L+++L+ + L KE
Sbjct: 359 KAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKE 401
Score = 38.1 bits (89), Expect = 0.052
Identities = 35/238 (14%), Positives = 93/238 (39%), Gaps = 20/238 (8%)
Query: 875 LKSEREALVTESEELKVQLHLSEDKVDTVQAQLLE----TARRLKEAENVGESLRKDLLD 930
K + L + + L +++ + ++ T + E + +N + L ++
Sbjct: 172 NKDKIRELNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKT 231
Query: 931 TKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGD-DEKQAL 989
K + + E +D + K+ + I++ QK+ +
Sbjct: 232 IKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQ-FQKVIKMYEKGGVCPTC 290
Query: 990 RNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEK-CKFLE-----------IEKEK 1037
Q+++ + + +K +L + + LD+ L+E +F E I K
Sbjct: 291 TQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNK 350
Query: 1038 YNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQ-KYEQSV 1094
+ +I+ + +V+ + ++ + D + +L+ LQ + + +V+ + L + KY + +
Sbjct: 351 QS-LITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGI 407
Score = 35.8 bits (83), Expect = 0.22
Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 21/194 (10%)
Query: 389 RKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVK 448
RK+ K E+ T+K + E + N+ + ++ L++ A++ + E K
Sbjct: 217 RKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQK 276
Query: 449 NIEMLR-------------VEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESL 495
I+M + K K ++ E+ SL + + + + NE
Sbjct: 277 VIKMYEKGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNE-Q 335
Query: 496 QSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNK 555
+ L L+N++ + + + + L+ + + E+L L+
Sbjct: 336 SKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEEL-------AKLQDEL 388
Query: 556 EEMQTLLAHIEKSK 569
+++ + + K K
Sbjct: 389 DKIVKTKSELVKEK 402
Score = 30.8 bits (70), Expect = 8.0
Identities = 36/242 (14%), Positives = 95/242 (39%), Gaps = 35/242 (14%)
Query: 1348 ANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRAL 1407
N Q + +D K + H+++++ T N+ E++ + + + + + L E + +
Sbjct: 179 LNQQIQTLDMK---IDHIQQQIKTYN---KNIEEQRKKNGENIARKQNKYDELVEEAKTI 232
Query: 1408 QDELSRTEARVTKLELQRVALEGDQQRL---------QMLLQEKETNLHKLQERCEHQCR 1458
+ E+ + L + +L ++ +K +++ C +
Sbjct: 233 KAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGGVCPTCTQ 292
Query: 1459 NITGLEERCTSLKTTIDQLNLTLERASAGETELRG---EIQTLQRNLMDTSLNSQSNCEK 1515
I+ +R T +K + +L +LE+ EL E + L++ L + K
Sbjct: 293 QISEGPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLE--LKN-----K 345
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDL 1575
+ ++ L + ++ + ++ A + Q ++N ++L + L + +K
Sbjct: 346 ISTNKQSLITLVDKAKKVK----------AAIEELQAEFVDNAEELAKLQDELDKIVKTK 395
Query: 1576 SD 1577
S+
Sbjct: 396 SE 397
>gnl|CDD|129694 TIGR00606, rad50, rad50. All proteins in this family for which
functions are known are involvedin recombination,
recombinational repair, and/or non-homologous end
joining.They are components of an exonuclease complex
with MRE11 homologs. This family is distantly related to
the SbcC family of bacterial proteins.This family is
based on the phylogenomic analysis of JA Eisen (1999,
Ph.D. Thesis, Stanford University).
Length = 1311
Score = 42.0 bits (98), Expect = 0.004
Identities = 139/876 (15%), Positives = 322/876 (36%), Gaps = 93/876 (10%)
Query: 55 KKLEAYRTSQQQQAALVSKLQAKLLQYKQRCKELELEREAPSTSSYLGPLPSTPLPSALD 114
K++E + + + L+++ Q ++ ELEL+ E + L
Sbjct: 255 KEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGT------DEQLNDLYH 308
Query: 115 AAQAHLREMREERIQDLNTALRRLDDERRE--NEKLRKMNSVYKEQLDEAHHTNEALTND 172
Q +RE +E + D L +L+ ERR EK + + QL H D
Sbjct: 309 NHQRTVRE-KERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARD 367
Query: 173 LEKLTTDWTHLREEMAMKEKDWIEEEQYFNDYYSSEHARLLALWRDVVDIKRSFTAMQSA 232
+ R E+ E+ E Q N +++ R + + + +
Sbjct: 368 SLIQS---LATRLELDGFERGPFSERQIKN-FHTLVIERQEDEAKTAAQLCADLQSKERL 423
Query: 233 TEQDLSKIRSDLNQSTRQMSGACNGLV--------ALSAGSSATNAEKDKLVKENSELKS 284
++ +IR + R + L + + L + K+
Sbjct: 424 KQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKA 483
Query: 285 QVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNT 344
+ + K+E N++ K++ + ++ ++ + + E++
Sbjct: 484 ERELSKAEKNSLTETLKKEVKSLQN--EKADLDRKLRKLDQEM----EQLNHHTTTRTQM 537
Query: 345 LRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTM 404
+ +D + + I SR + + + P+ K ++ R++L +
Sbjct: 538 EMLTKDKMDKDEQIRKIKSRHSD-ELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKL 596
Query: 405 KKQYESADESQYNMSQQVTSLTSQL-------------DQTKAQLAQVGREKEALVKNIE 451
K+ S ++++ +++ ++ S QL ++ L ++ E E K
Sbjct: 597 NKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESDLERLKEEIEKSSKQRA 656
Query: 452 MLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINS 511
ML + + ++ + +S +V + + L + LQS+ ++L S
Sbjct: 657 MLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTES 716
Query: 512 DMDARE-------VELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAH 564
++ +E G++ + +++ L+ + L+ + EE +TLL
Sbjct: 717 ELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGT 776
Query: 565 I---EKSKGDVEAE---MERLLLDRSDMNEQISKYEITIEAND---------KELQRLQE 609
I E+S + MER ++ D+ +I++ ++ +D +E Q Q
Sbjct: 777 IMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQH 836
Query: 610 QLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHE---VQELLVKQESLKGQVVRLNKE 666
+L ++ S E ++ D Q ++ K +L+ E + L +++ + Q+V L+ E
Sbjct: 837 ELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTE 896
Query: 667 LEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVT 726
++ + ++ K + L+ D Q + + + K ++K+N K+
Sbjct: 897 VQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETS--NKKAQDKVNDIKEK----- 949
Query: 727 KLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRA 786
+ +E K+ ++K+ EL+ + A L + C++H++ +
Sbjct: 950 --VKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEE--------CEKHQEKINED 999
Query: 787 EGDKQQALLIAQQDQKAIQDRLSQV-----LKELEEEKCTLDRIKRESAGRSEQDRNTIN 841
+Q + + ++ +QD L+ LKE+EEE K + Q +
Sbjct: 1000 MRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEELKQHL--KEMGQMQVLQMKQEHQ 1057
Query: 842 TLREQLN---RTVAKLEELKTRTEEEKAILERKISD 874
L E ++ R + E+E ++++ +
Sbjct: 1058 KLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELRE 1093
Score = 41.6 bits (97), Expect = 0.005
Identities = 96/588 (16%), Positives = 245/588 (41%), Gaps = 27/588 (4%)
Query: 397 HREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGR----EKEALVKNIEM 452
H + + + ++A + ++ + Q D+ + + +GR +KE L K E
Sbjct: 396 HTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEE 455
Query: 453 LRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSK--INESLQSEKLFLQNELDRIN 510
L+ L++ + + ++E L+ L K ++ S+ K + E+L+ E LQNE ++
Sbjct: 456 LKFVIKELQQLEGSSDRILE-LDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLD 514
Query: 511 SDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG 570
+ + E+ + ++ + + + +++ ++ +E+ +LL + K
Sbjct: 515 RKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKK- 573
Query: 571 DVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQS 630
+E + + + ++++K + + ++ + +L S S E LFD
Sbjct: 574 QLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCG 633
Query: 631 HLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDA 690
+ + E+L+ E+++ ++ L G ++ + Q + Q+ +A
Sbjct: 634 S-QDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSC-CPVCQRVFQTEA 691
Query: 691 DYQNQISNLKKQNEECVTKL--TEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVK 748
+ Q IS+L+ + KL TE ++ K++ + + L ++ + EK++ ++
Sbjct: 692 ELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEI-PELR 750
Query: 749 QITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRL 808
++ + ++ RL+ ++ + ++ + I + E A + I ++ Q L
Sbjct: 751 NKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESA-----KVCLTDVTIMER----FQMEL 801
Query: 809 SQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEK--- 865
V +++ ++ L + +Q + +L+ V+K+E + ++++
Sbjct: 802 KDVERKIAQQAAKLQGSDLDRT--VQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQI 859
Query: 866 AILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLR 925
L+ K ++LKSE+ + T + + + VQ+ + E ++ + L
Sbjct: 860 QHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLE 919
Query: 926 KDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEG 973
KD + + ++ K D++E VK + +D I +G
Sbjct: 920 KDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDG 967
Score = 36.6 bits (84), Expect = 0.15
Identities = 45/218 (20%), Positives = 86/218 (39%), Gaps = 3/218 (1%)
Query: 1394 RESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERC 1453
+E + L ++ R D+L TE+ + K E +R + G Q ++ KE + +L+ +
Sbjct: 694 QEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKL 753
Query: 1454 EHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNC 1513
+ R+I L+ +T + + E A T++ ++ Q L D
Sbjct: 754 QKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDV-TIMERFQMELKDVERKIAQQA 812
Query: 1514 EKLK--QLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKRE 1571
KL+ L + + EK+ Q LDT + + R+ ++ E LK+ T LK E
Sbjct: 813 AKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSE 872
Query: 1572 IKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQ 1609
+ + Q + +Q ++ Q
Sbjct: 873 KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQ 910
>gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional.
Length = 1388
Score = 41.6 bits (98), Expect = 0.005
Identities = 61/354 (17%), Positives = 130/354 (36%), Gaps = 18/354 (5%)
Query: 330 LVEEMQQELELLQNTLRDIARAVIQD------AEGKDIPSRPAPLKRHATFSARPSTSIK 383
L+ ++++EL L N +R I + VI A+ KD+ LK+ + K
Sbjct: 1000 LLGKLERELARLSNKVRFI-KHVINGELVITNAKKKDLVKE---LKKLGYVRFKDIIKKK 1055
Query: 384 PSVTFRKETKLATHREQLHTMKKQYESADESQYN--MSQQVTSLT-SQLDQTKAQLAQVG 440
+E + A ++ + E Y+ +S + SLT ++++ A+L +
Sbjct: 1056 SEKITAEEEEGAEEDDEADDEDDEEELGAAVSYDYLLSMPIWSLTKEKVEKLNAELEKKE 1115
Query: 441 REKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKL 500
+E E L KN + L+K + + E E + K Q+ S+ L+ KL
Sbjct: 1116 KELEKL-KNTTPKDMWLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKL 1174
Query: 501 FLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQT 560
+ + + +S +++ ++R+ D +D + K ++E+ +
Sbjct: 1175 KKKEKKKKKSSADKSKKAS---VVGNSKRVDSDEKRKLDDKPDNK-KSNSSGSDQEDDEE 1230
Query: 561 LLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKES 620
+KS + S+ N++ S +++ E K + +
Sbjct: 1231 QKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSK 1290
Query: 621 LEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRA 674
+ S KK + E +K++ + K+ + K+A
Sbjct: 1291 RPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQA 1344
Score = 35.4 bits (82), Expect = 0.32
Identities = 24/186 (12%), Positives = 63/186 (33%), Gaps = 11/186 (5%)
Query: 840 INTLREQLNRTVAKLEELKTRT-----EEEKAILERKISDLKSEREALVTESEELKVQLH 894
+ L +L + +LE+LK T E+ E + + + E + + + LK +
Sbjct: 1104 VEKLNAELEKKEKELEKLKNTTPKDMWLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTK 1163
Query: 895 LSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLRE 954
K+ + + E ++ A+ ++ + EK K + +
Sbjct: 1164 GKASKLRKPKLKKKEKKKKKSSADKSKKASVV-----GNSKRVDSDEKRKLDDKPDNKKS 1218
Query: 955 MVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIR 1014
+ E ++ +T + ++ + ++ ND+ + K+ + R
Sbjct: 1219 NSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSS-KSSEDNDEFSSDDLSKEGKPKNAPKR 1277
Query: 1015 LDLDSE 1020
+
Sbjct: 1278 VSAVQY 1283
Score = 32.3 bits (74), Expect = 2.9
Identities = 65/446 (14%), Positives = 136/446 (30%), Gaps = 71/446 (15%)
Query: 584 SDMNEQISKYEITIEANDKE--LQRLQ-------EQLASLRSDKESLEA----ILFDTQS 630
D N +I KY KE L RL L L + L I
Sbjct: 966 FDENGKIKKYS-DALDILKEFYLVRLDLYKKRKEYLLGKLERELARLSNKVRFIKHVING 1024
Query: 631 HLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDA 690
L ++ KK+ L E+++L + +D K+ E + ++ + D
Sbjct: 1025 ELVITNAKKKDLVKELKKLGYVR-------------FKDIIKKKSEKITAEEEEGAEEDD 1071
Query: 691 DYQNQISNLKKQNEEC--------VTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKK 742
+ ++ + + LT+EK+ KL E E+ LEK
Sbjct: 1072 EADDEDDEEELGAAVSYDYLLSMPIWSLTKEKVE----------KLNAELEKKEKELEKL 1121
Query: 743 LHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQK 802
+ T K + E +L + + L Q+ + A+ + + K
Sbjct: 1122 KNTTPKDMWLE---DLDKFEEAL---------EEQEEVEEKEIAKEQRL------KSKTK 1163
Query: 803 AIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTE 862
+L + + +E+K + + + R + + K
Sbjct: 1164 GKASKLRKPKLKKKEKK---KKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNS 1220
Query: 863 EEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGE 922
+ + K ++ ++ + SED + L + + + V
Sbjct: 1221 SGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRV-- 1278
Query: 923 SLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFG 982
S + + D E + +K + ++ VKK + + +K A +
Sbjct: 1279 SAVQYSPPPPSKRPDG--ESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKK 1336
Query: 983 DDEKQALRNQLNDQSNDVASLKKELL 1008
+ + + S + +K+
Sbjct: 1337 SKTRVKQASA-SQSSRLLRRPRKKKS 1361
Score = 31.6 bits (72), Expect = 4.7
Identities = 57/370 (15%), Positives = 119/370 (32%), Gaps = 47/370 (12%)
Query: 1068 QLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGG 1127
+L + KK+++V++L +L V + + K E + E EE +
Sbjct: 1025 ELVITNAKKKDLVKELKKLG-----YVRFKDIIKKKSEKITAEEEEGAEEDDEADDEDDE 1079
Query: 1128 AEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQ 1187
E S +LL + + S+ T ++ L AEL + +
Sbjct: 1080 EELGAAVSYDYLLSM---------PIWSL--TKEKVEKL-----------NAELEKKEKE 1117
Query: 1188 YDAYKSMDCHTDRSSDLERYRAA-QLHAESLLEAREKSHRQQVN------RLENQLDGRA 1240
+ K+ DL+++ A + E + K R + +L +
Sbjct: 1118 LEKLKNTTPKDMWLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKK 1177
Query: 1241 SHAGGKMTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQ 1300
K ++ + + V G +D D + + + + + DD + T+
Sbjct: 1178 EKKKKKSSADKSKKASV---VGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTK 1234
Query: 1301 ALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNE 1360
K +K L S + ++ + + A S + +
Sbjct: 1235 PKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDG 1294
Query: 1361 ELQH-------LREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSR 1413
E ++KV ++K + + K + ++S R K+A + SR
Sbjct: 1295 ESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTR---VKQASASQSSR 1351
Query: 1414 TEARVTKLEL 1423
R K +
Sbjct: 1352 LLRRPRKKKS 1361
>gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827).
This family consists of several plant proteins of
unknown function. Several sequences in this family are
described as being "myosin heavy chain-like".
Length = 484
Score = 40.7 bits (95), Expect = 0.006
Identities = 79/393 (20%), Positives = 167/393 (42%), Gaps = 24/393 (6%)
Query: 586 MNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHE 645
+E++ E + +E +L+++L +K + L T+ +E +K E+ E E
Sbjct: 27 RSERVLVKETELMLAQEEANKLKKELEVAEKEKLQVLKELESTKRTVEDLKLKLEKAEKE 86
Query: 646 VQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEE 705
Q+ E K + L + +++ E T + + + + L ++ +
Sbjct: 87 EQQAKQDSELAKLRAEELEQGIQELEVERYITATAELDSVKEELRKIRQEYDALVEERDA 146
Query: 706 CVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVK------QITEEKDCELS 759
+ + EE I K NE+ V +LT+E ++ +LE+ A ++ EKD +
Sbjct: 147 ALKR-AEEAICASKVNEKKVEELTKEIIAMKESLERAHAAHLEAEEERIGAALEKDQDRE 205
Query: 760 RLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEK 819
+ L + + ++++ Q + + + A L + Q + +I ++ VLKELEE K
Sbjct: 206 TYEKELKEAEKELERLKQDLDPEKDLEKLAEASAELESLQKEISIMASVASVLKELEEAK 265
Query: 820 CTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSER 879
L++ E RN + +L+++L +LEEL+ + E + ++L +
Sbjct: 266 ANLEKAAEEEK----SLRNLVESLKQELEEEKKELEELREKEGEAEEAASSLEAELNRTK 321
Query: 880 EALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSN 939
+++ E V++ L +L + + +EA E+ R++L K +
Sbjct: 322 SEKESKAREKMVEIPL----------KLQQASSEAEEARKEAEAAREELRKLKEEAEQT- 370
Query: 940 FEKDKYAKSNKDLREMVKKVESEKRDQARTIDE 972
K + L +K+ E+ K +A + E
Sbjct: 371 --KAALETAELRLEAALKEAEAAKAAEALALAE 401
>gnl|CDD|235316 PRK04863, mukB, cell division protein MukB; Provisional.
Length = 1486
Score = 40.7 bits (96), Expect = 0.008
Identities = 68/362 (18%), Positives = 135/362 (37%), Gaps = 55/362 (15%)
Query: 1271 PEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQ-------- 1322
PE+ G +++ Q+ ER++L L +++ L H S +
Sbjct: 774 PEVPLFGRAAREKRIEQLRAEREELAERYATLSFDVQKLQRLHQAFSRFIGSHLAVAFEA 833
Query: 1323 -AQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSE 1381
+ +R L + LE L+ ++ Q ++Q E L L L N+
Sbjct: 834 DPEAELRQLNRRRVELERALADHESQEQQQRSQLEQAKEGLSALNRL-----LPRLNLLA 888
Query: 1382 EKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQE 1441
+++ D++ + RE + KR +Q + + +LE L+ D ++ + L Q+
Sbjct: 889 DETL-ADRVEEIREQLDEAEEAKRFVQ----QHGNALAQLEPIVSVLQSDPEQFEQLKQD 943
Query: 1442 KETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRN 1501
+ + Q + Q +T + +R L
Sbjct: 944 YQQA-QQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLA--------------------- 981
Query: 1502 LMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDL 1561
+ EKL+Q + AE E+ +E+L QA LA+ + + + D
Sbjct: 982 ------KNSDLNEKLRQRLE---QAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAK 1032
Query: 1562 KAMTQALKREIKDL-----SDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANS 1616
+ M Q LK+E++DL S A + + + + A + + LE +L+ +A ++
Sbjct: 1033 RQMLQELKQELQDLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDN 1092
Query: 1617 QN 1618
Sbjct: 1093 LT 1094
Score = 37.6 bits (88), Expect = 0.082
Identities = 29/177 (16%), Positives = 68/177 (38%), Gaps = 10/177 (5%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSD--------AHTQESNKMAQAQQTMRALQEEK 1334
+Q Q++++ + + K++ L++ ++ + +A+ L++
Sbjct: 935 EQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLNEKLRQRL 994
Query: 1335 YALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCR 1394
E + ++ + + Q N+ L L+ L + +E D +
Sbjct: 995 EQAEQERTRAREQLRQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQ--DLGVPADS 1052
Query: 1395 ESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQE 1451
+ R A + L LS +R +LE Q E + L L++ E + H+++E
Sbjct: 1053 GAEERARARRDELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMRE 1109
Score = 33.0 bits (76), Expect = 2.1
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 9/144 (6%)
Query: 517 EVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEM 576
E LR ++ R L E ++L + + LEQ +EE++ L + +S +
Sbjct: 526 EQRLRQQQRAERLLAEFCKRLGKNLDDE----DELEQLQEELEARLESLSESVSEARERR 581
Query: 577 ERLLLDRSDMNEQISKYEIT----IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHL 632
L + +I + + A D L RL+EQ D + + +
Sbjct: 582 MALRQQLEQLQARIQRLAARAPAWLAAQDA-LARLREQSGEEFEDSQDVTEYMQQLLERE 640
Query: 633 EQSDVKKEQLEHEVQELLVKQESL 656
+ V++++L Q L + E L
Sbjct: 641 RELTVERDELAARKQALDEEIERL 664
Score = 32.6 bits (75), Expect = 2.6
Identities = 69/372 (18%), Positives = 148/372 (39%), Gaps = 59/372 (15%)
Query: 528 RRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEME----RLLLDR 583
R E+ L +L ++ + EM LA + +++ D+E + + L L +
Sbjct: 282 RVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQ 341
Query: 584 SDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLE 643
+ + R QE++ ++D E LE L + +E++D ++E+ E
Sbjct: 342 TAL-------------------RQQEKIERYQADLEELEERLEEQNEVVEEADEQQEENE 382
Query: 644 HEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQN 703
+ + + LK Q+ + L+ Q+T+A QQA + L++
Sbjct: 383 ARAEAAEEEVDELKSQLADYQQALD-----VQQTRAIQYQQA----------VQALERAK 427
Query: 704 EEC-VTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKL--HATVKQITEEKDCELSR 760
+ C + LT + N + EE K E E++ +LE+KL E+ + +
Sbjct: 428 QLCGLPDLTAD--NAEDWLEEFQAKEQEATEELL-SLEQKLSVAQAAHSQFEQAYQLVRK 484
Query: 761 LQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKC 820
+ + + ++ + L R + A + + ++ RLS++ + L +++
Sbjct: 485 IAGEVSRSEAW-----DVARELLRRLREQRHLA-----EQLQQLRMRLSELEQRLRQQQ- 533
Query: 821 TLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSERE 880
+R+ E R ++ + + L + A+LE L E + + L+ + E
Sbjct: 534 RAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESL----SESVSEARERRMALRQQLE 589
Query: 881 ALVTESEELKVQ 892
L + L +
Sbjct: 590 QLQARIQRLAAR 601
Score = 31.9 bits (73), Expect = 3.9
Identities = 79/351 (22%), Positives = 143/351 (40%), Gaps = 53/351 (15%)
Query: 1278 VRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYAL 1337
V+ ++Q +IER + DL+ + + L+ + + + +A Q+ A+A+ +EE L
Sbjct: 340 VQTALRQQEKIERYQADLEELEERLEEQNEVVEEADEQQEENEARAEAA----EEEVDEL 395
Query: 1338 ETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTL----ELTLSNVSE--------EKSQ 1385
+++L+ + A + Q Q + +Q L E+ L +LT N + E+
Sbjct: 396 KSQLADYQQALDVQQTRAIQYQQAVQAL-ERAKQLCGLPDLTADNAEDWLEEFQAKEQEA 454
Query: 1386 GDDKLM---KCRESGARLDAEKRALQ------DELSRTEARVTKLELQR-----VALEGD 1431
++ L K + A ++A Q E+SR+EA EL R L
Sbjct: 455 TEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQRHLAEQ 514
Query: 1432 QQRLQMLLQEKETNLHKLQE----------RCEHQCRNITGLEERCTSLKTTIDQLNLTL 1481
Q+L+M L E E L + Q R + LE+ L+ ++ L+ ++
Sbjct: 515 LQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESV 574
Query: 1482 ERASAGETELRGEIQTLQ---RNLMDTSLNSQSNCEKLKQLQKLLHSA-ENEKRVLQERL 1537
A LR +++ LQ + L + + + L +L++ E+ + V +
Sbjct: 575 SEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQ 634
Query: 1538 DTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQ 1588
L R V R D+L A QAL EI+ LS E ++
Sbjct: 635 QL----LERERELTVER----DELAARKQALDEEIERLSQPGGSEDPRLNA 677
Score = 31.1 bits (71), Expect = 6.6
Identities = 91/421 (21%), Positives = 168/421 (39%), Gaps = 74/421 (17%)
Query: 789 DKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLR--EQ 846
+ ++ L +++ A Q RL ++ +EL E ++++ S+ LR E+
Sbjct: 290 ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEK 349
Query: 847 LNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE----LKVQLHLSEDKVDT 902
+ R A LEEL+ R EE+ ++E + + + E EA +EE LK QL + +D
Sbjct: 350 IERYQADLEELEERLEEQNEVVE-EADEQQEENEARAEAAEEEVDELKSQLADYQQALDV 408
Query: 903 VQA---------QLLETARRLK-----EAENVG----------ESLRKDLLDTKTHLADS 938
Q Q LE A++L A+N + ++LL + L+ +
Sbjct: 409 QQTRAIQYQQAVQALERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVA 468
Query: 939 NFEKDKYAKSNKDLREMVKKVE-SEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLND-- 995
++ ++ + +R++ +V SE D AR + L++ R ++ Q LR +L++
Sbjct: 469 QAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRRLREQ--RHLAEQLQQLRMRLSELE 526
Query: 996 ----QSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQV 1051
Q L E + LD + E LQE+ LE E +
Sbjct: 527 QRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEE---LEARLE-------------SL 570
Query: 1052 EVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKEC 1111
+S+ + R L QL E + + RL + + + + + L + E
Sbjct: 571 SESVSEARERRMALRQQL-------EQLQARIQRLAARAPAWLAAQDALAR-LREQSGEE 622
Query: 1112 EEKEVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVE---HKLSSIG----STLRRIA 1164
E + + +L ER R + +L A K+ ++ +LS G L +A
Sbjct: 623 FEDSQDVTEYMQQL---LERERELTVERDELAARKQALDEEIERLSQPGGSEDPRLNALA 679
Query: 1165 A 1165
Sbjct: 680 E 680
>gnl|CDD|189014 cd09607, M3B_PepF_2, Peptidase family M3B Oligopeptidase F (PepF).
Peptidase family M3B Oligopeptidase F (PepF;
Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and
includes oligoendopeptidase F from Lactococcus lactis.
This enzyme hydrolyzes peptides containing between 7 and
17 amino acids with fairly broad specificity. The PepF
gene is duplicated in L. lactis on the plasmid that
bears it, while a shortened second copy is found in
Bacillus subtilis. Most bacterial PepFs are cytoplasmic
endopeptidases; however, the PepF Bacillus
amyloliquefaciens oligopeptidase is a secreted protein
and may facilitate the process of sporulation.
Specifically, the yjbG gene encoding the homolog of the
PepF1 and PepF2 oligoendopeptidases of Lactococcus
lactis has been identified in Bacillus subtilis as an
inhibitor of sporulation initiation when over expressed
from a multicopy plasmid.
Length = 581
Score = 40.6 bits (96), Expect = 0.008
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 549 ELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYE------ITIEANDK 602
+ L+Q +E+++LL + S D +E L+ ++ E + ++ + D+
Sbjct: 20 KKLKQLIDELKSLLDALLPSDEDAVETLEALITLLQELLELLRTLGAFVSCLLSADTTDE 79
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKK 639
E Q L QL L + E L +L + L + D+
Sbjct: 80 EAQALLSQLNQLSASLEQLLTLLDKKLAALSEEDLDA 116
Score = 31.7 bits (73), Expect = 4.1
Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Query: 829 SAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE 888
G S + + + L++ ++ + L+ L E+ LE I+ L + L+
Sbjct: 8 PGGDSPEFQEDLKKLKQLIDELKSLLDALLPSDEDAVETLEALITLL----QELLELLRT 63
Query: 889 LK--VQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYA 946
L V LS D D LL +L + E L L L++ + +
Sbjct: 64 LGAFVSCLLSADTTDEEAQALLS---QLNQLSASLEQLLTLLDKKLAALSEEDLDA---L 117
Query: 947 KSNKDLREMVKKVESEKRDQARTIDEGLQKIA 978
++ +L+E +E +R + E +++
Sbjct: 118 LADPELKEHAFFLEERRRQAKHLLSEEEEELI 149
>gnl|CDD|221952 pfam13166, AAA_13, AAA domain. This family of domains contain a
P-loop motif that is characteristic of the AAA
superfamily. Many of the proteins in this family are
conjugative transfer proteins. This family includes the
PrrC protein that is thought to be the active component
of the anticodon nuclease.
Length = 713
Score = 40.8 bits (96), Expect = 0.008
Identities = 35/187 (18%), Positives = 75/187 (40%), Gaps = 8/187 (4%)
Query: 1440 QEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQ 1499
QE L +L ++ E E + + L +E A L ++
Sbjct: 281 QELIEQLEELIDKYESHIEKALEELESILDTEKENSEFKLDVEELKALLEALEEILEKNL 340
Query: 1500 RNL------MDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVN 1553
+ L TS+ +S + ++ + ++ + R E++D + + +++
Sbjct: 341 QKLEEKLKDPSTSIELESITDLIESINDIIDAINELIREHNEKIDNLKKEKNKAKKKL-- 398
Query: 1554 RLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAA 1613
L +LK A ++E K L A ++ Q + ++AL++E LE +L+ +
Sbjct: 399 WLHLVAELKEDIDAYQKEKKGLEKAINSLEKEIKQLEAEIKALEKEIKELEKQLTNIEPT 458
Query: 1614 ANSQNEL 1620
A+ N+L
Sbjct: 459 ADEINKL 465
Score = 36.9 bits (86), Expect = 0.13
Identities = 66/408 (16%), Positives = 140/408 (34%), Gaps = 68/408 (16%)
Query: 799 QDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAK----- 853
++ I+ ++ ++ KEL++ + +++++ E + E+ N ++ + +AK
Sbjct: 88 EENIEIEAQIEELKKELKKLEEKIEQLEAEIEKKEEELEKAKNKFLDKAWKKLAKKYDSN 147
Query: 854 LEELKTRTEEEKAILERKISDLKSE-REALVTESEELKVQLHLSEDKVDTVQAQLLETAR 912
L E +K E+ + +LKS A S E +L +
Sbjct: 148 LSEALKGLNYKKNFKEKLLKELKSVILNASSLLSLE-----------------ELKAKIK 190
Query: 913 RLKEAENVGESLR-KDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVES---------- 961
L + +L ++D EK S+ + E++ + +
Sbjct: 191 TLFSSNKPELALLTLSVIDFDEIEQAEILEKSIIGSSDVPISELINNLGNSDWVKEGLEY 250
Query: 962 -EKRDQAR----TIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLD 1016
E+ D TI E + D+E Q L QL + + S ++ L+ + LD
Sbjct: 251 HEEGDTCPFCQQTITEERKAELEAHFDEEYQELIEQLEELIDKYESHIEKALEELESILD 310
Query: 1017 LDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKK 1076
+ E + + L+ E +E L ++ + D S + L
Sbjct: 311 TEKENSEFKLDVEELKALLEALE---------EILEKNLQKLEEKLKDPSTSIEL----- 356
Query: 1077 ENVVEDLARLKQKYEQ---SVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGAEERVR 1133
E++ + + + + + +N NL+ + ++K L E
Sbjct: 357 ESITDLIESINDIIDAINELIREHNEKIDNLKKEKNKAKKK--------LWLHLVAELKE 408
Query: 1134 ASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAEL 1181
A+ + + +K + I I AL + E E +L
Sbjct: 409 DIDAYQKEKKGLEKAINSLEKEIKQLEAEIKALEKE----IKELEKQL 452
Score = 36.1 bits (84), Expect = 0.17
Identities = 41/227 (18%), Positives = 85/227 (37%), Gaps = 45/227 (19%)
Query: 399 EQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKS 458
EQL + +YES E + + + + K + ++ EAL + +E
Sbjct: 285 EQLEELIDKYESHIEKALEELESILDTEKENSEFKLDVEELKALLEALEEILEKNL---Q 341
Query: 459 ALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREV 518
LE+ ++ + +E L S D ++ N + INE + N +D +
Sbjct: 342 KLEEKLKDPSTSIE-LESITDLIESINDIIDAINE-----------LIREHNEKIDNLKK 389
Query: 519 ELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMER 578
E K KL L+ + KE++ + + +
Sbjct: 390 EK------------------NKAKK-KLWLHLVAELKEDIDAYQKEKKGLEKAIN----- 425
Query: 579 LLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAIL 625
+ ++I + E I+A +KE++ L++QL ++ + + +L
Sbjct: 426 ------SLEKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLL 466
Score = 35.4 bits (82), Expect = 0.31
Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 33/212 (15%)
Query: 548 KELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLD---RSDMNEQISKYEITIEANDKEL 604
+EL+EQ +E + +HIEK+ E+E +L S+ + + + +EA ++ L
Sbjct: 281 QELIEQLEELIDKYESHIEKAL----EELESILDTEKENSEFKLDVEELKALLEALEEIL 336
Query: 605 QRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLN 664
++ ++L D T LE E + + + ++ L
Sbjct: 337 EKNLQKLEEKLKD-------PS-TSIELESITDLIESINDIIDAINELIREHNEKIDNLK 388
Query: 665 KELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEEC 724
KE +K + LV + YQ + L+K ++ + + +K +E
Sbjct: 389 KEKNKAKK---KLWLHLVAELKEDIDAYQKEKKGLEKAINSLEKEIKQLEAEIKALEKE- 444
Query: 725 VTKLTEEKEQVRAALEKKL---HATVKQITEE 753
LEK+L T +I +
Sbjct: 445 -----------IKELEKQLTNIEPTADEINKL 465
Score = 35.0 bits (81), Expect = 0.43
Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 32/216 (14%)
Query: 298 NESKQKEERVEELLKRIHT--------LEARVEEADQN---VLLVEEMQQELELLQNTLR 346
E ++ E++EEL+ + + LE+ ++ +N L VEE++ LE L+ L
Sbjct: 278 EEYQELIEQLEELIDKYESHIEKALEELESILDTEKENSEFKLDVEELKALLEALEEILE 337
Query: 347 DIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSIKPSVTF---------RKETKLATH 397
+ + E PS L+ SI + K L
Sbjct: 338 KNLQKL---EEKLKDPSTSIELES----ITDLIESINDIIDAINELIREHNEKIDNLKKE 390
Query: 398 REQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEK 457
+ + + + + + + + + + + +E + L I+ L E
Sbjct: 391 KNKAKKKLWLHL-----VAELKEDIDAYQKEKKGLEKAINSLEKEIKQLEAEIKALEKEI 445
Query: 458 SALEKNKREINEMVESLNSNLDKVQKNNSRLSKINE 493
LEK I + +N L N L K E
Sbjct: 446 KELEKQLTNIEPTADEINKLLKAYGFGNFELEKEAE 481
Score = 33.4 bits (77), Expect = 1.1
Identities = 33/212 (15%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
+ + Q+E D ++ + E++ + D + S + + L+ L
Sbjct: 282 ELIEQLEELIDKYESHIEKALEELESILDTEKENS-----------EFKLDVEELKALLE 330
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDA 1402
+ + +++K ++ E +L + ++++ ++ + + E L
Sbjct: 331 ALEEILEKNLQKLEEKLKDPSTSIELESITDL-IESINDIIDAINELIREHNEKIDNLKK 389
Query: 1403 EKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITG 1462
EK + +L K ++ A + +++ L+ + E + +L+ + + I
Sbjct: 390 EKNKAKKKLWLHLVAELKEDID--AYQKEKKGLEKAINSLEKEIKQLEAEIKALEKEIKE 447
Query: 1463 LEERCTSLKTTIDQLNLTLERASAGETELRGE 1494
LE++ T+++ T D++N L+ G EL E
Sbjct: 448 LEKQLTNIEPTADEINKLLKAYGFGNFELEKE 479
Score = 32.7 bits (75), Expect = 2.3
Identities = 66/410 (16%), Positives = 148/410 (36%), Gaps = 69/410 (16%)
Query: 299 ESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEG 358
E+ + E ++EEL K + LE ++E+ + +E+ ++ELE +N D A +
Sbjct: 89 ENIEIEAQIEELKKELKKLEEKIEQLEAE---IEKKEEELEKAKNKFLDKAWKKLAKKYD 145
Query: 359 KDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNM 418
++ L F + +K + A+ L +K + ++ S
Sbjct: 146 SNLSEALKGLNYKKNFKEK---LLK---ELKSVILNASSLLSLEELKAKIKTLFSSNKPE 199
Query: 419 SQQVTSLTSQLDQTKAQ--LAQ--VGREKEAL------VKNIEMLRVEKSALEKNKR--- 465
+T D+ + L + +G + + N + ++ E+
Sbjct: 200 LALLTLSVIDFDEIEQAEILEKSIIGSSDVPISELINNLGNSDWVKEGLEYHEEGDTCPF 259
Query: 466 ---EI-NEMVESLNSNLDK-VQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVEL 520
I E L ++ D+ Q+ +L ++ + +S EL+ I
Sbjct: 260 CQQTITEERKAELEAHFDEEYQELIEQLEELIDKYESHIEKALEELESILDTEKENS--- 316
Query: 521 RGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDV--EAEMER 578
D++ K E LE E ++ L +E+ D E+E
Sbjct: 317 ---------------EFKLDVEELKALLEALE---EILEKNLQKLEEKLKDPSTSIELES 358
Query: 579 LLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRS-------------------DKE 619
+ +N+ I I +++++ L+++ + +K+
Sbjct: 359 ITDLIESINDIIDAINELIREHNEKIDNLKKEKNKAKKKLWLHLVAELKEDIDAYQKEKK 418
Query: 620 SLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELED 669
LE + + ++Q + + + LE E++EL + +++ +NK L+
Sbjct: 419 GLEKAINSLEKEIKQLEAEIKALEKEIKELEKQLTNIEPTADEINKLLKA 468
Score = 32.7 bits (75), Expect = 2.4
Identities = 72/429 (16%), Positives = 153/429 (35%), Gaps = 73/429 (17%)
Query: 602 KELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQ------ES 655
+E ++ Q+ L+ + + LE + ++ +E+ + + E+ +++ + K+ +
Sbjct: 88 EENIEIEAQIEELKKELKKLEEKIEQLEAEIEKKEEELEKAKNKFLDKAWKKLAKKYDSN 147
Query: 656 LKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQ-ISNLKKQNEECVTKLTEEK 714
L + LN + EK +E K+ ++ +S L + I L N+ + LT
Sbjct: 148 LSEALKGLNYKKNFKEKLLKELKSVILNASSLLSLEELKAKIKTLFSSNKPELALLTLSV 207
Query: 715 INLK--KQNEECVTKLTEEKEQVRAALEKKLHAT--VKQ----ITEEKDCELSRLQANLC 766
I+ +Q E + + + L L + VK+ E C
Sbjct: 208 IDFDEIEQAEILEKSIIGSSDVPISELINNLGNSDWVKEGLEYHEEGDTCPF-------- 259
Query: 767 QLQSHIDKICQQHEDALLRAEGDK--QQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDR 824
CQQ +AE + + Q+ + +++ + + +E+ L+
Sbjct: 260 ---------CQQTITEERKAELEAHFDEEY---QELIEQLEELIDKYESHIEKALEELES 307
Query: 825 IKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDL--KSEREAL 882
I SE + E+L LE L+ E+ LE K+ D E E++
Sbjct: 308 ILDTEKENSEFKLDV-----EELKAL---LEALEEILEKNLQKLEEKLKDPSTSIELESI 359
Query: 883 VTESEELKVQLHLSEDKVDTVQAQLLE----TARRLKEAENVGESLRKDLLDTKTHLADS 938
E + D +D + + E KE + L L+
Sbjct: 360 TDLIESIN-------DIIDAINELIREHNEKIDNLKKEKNKAKKKLWLHLV--------- 403
Query: 939 NFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSN 998
K+ K+ + + K + S + + + ++ ++ + + E + L QL +
Sbjct: 404 AELKEDIDAYQKEKKGLEKAINSLE-KEIKQLEAEIKAL-----EKEIKELEKQLTNIEP 457
Query: 999 DVASLKKEL 1007
+ K L
Sbjct: 458 TADEINKLL 466
>gnl|CDD|234141 TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD. This
model describes the DndB protein encoded by an operon
associated with a sulfur-containing modification to DNA.
The operon is sporadically distributed in bacteria, much
like some restriction enzyme operons. DndD is described
as a putative ATPase. The small number of examples known
so far include species from among the Firmicutes,
Actinomycetes, Proteobacteria, and Cyanobacteria [DNA
metabolism, Restriction/modification].
Length = 650
Score = 40.4 bits (95), Expect = 0.008
Identities = 68/380 (17%), Positives = 144/380 (37%), Gaps = 47/380 (12%)
Query: 1260 GEGGEGLIDVD--PEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQES 1317
GE E L + D ++++ + L+ + I+R DL + L+R K +
Sbjct: 155 GEKIEALANPDRLASLLKEAIEVLLG-LDLIDRLAGDLTNV---LRRRKKSELPSSILSE 210
Query: 1318 NKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLS 1377
+ AL+ E K +E+ HLR ++ + +L
Sbjct: 211 ---------IEALEAELKEQSEKYEDLA--------------QEIAHLRNELEEAQRSLE 247
Query: 1378 NVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQM 1437
++ + K R G L E+ L+ +L EA Q L D L +
Sbjct: 248 SLEK----------KFRSEGGDLFEEREQLERQLKEIEAARKANRAQLRELAADPLPLLL 297
Query: 1438 LLQEKETNLHKLQERCEHQCRNIT--GLEERCTSLKTTIDQLNLTLERASAGETELRGEI 1495
+ ++ +LQ+ + Q +T LEER L ++ +L L E EL
Sbjct: 298 IPNLLDSTKAQLQKEEQSQQNQLTQEELEERDKELLESLPKLALPAEHVKEIAAEL---A 354
Query: 1496 QTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAE---LRRQQV 1552
+ + D+ + + + +L QL+ L+ + E + + +L L E +++
Sbjct: 355 EIDKPATTDSEIPHRLSGSELTQLEVLIQQVKRELQDAKSQLLKELRELEEELAEVDKKI 414
Query: 1553 NRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKA 1612
+ + +++ + + + L +L + + + Q + A++ + L+ K Q
Sbjct: 415 STIPSEEQIAQLLEELGEAQNELFRSEAEIEELLRQLETLKEAIEALRKTLDEKTKQKIN 474
Query: 1613 AANSQNELEVKEVARAGLES 1632
A + + + + A+ L+
Sbjct: 475 AFELERAITIADKAKKTLKE 494
Score = 35.8 bits (83), Expect = 0.24
Identities = 73/326 (22%), Positives = 125/326 (38%), Gaps = 31/326 (9%)
Query: 803 AIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTE 862
A DRL+ +LKE E LD I R + + R + ++++E L+ +
Sbjct: 162 ANPDRLASLLKEAIEVLLGLDLIDRLAGDLTNVLRRRKKSELPSSI--LSEIEALEAELK 219
Query: 863 EEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETA----RRLKEAE 918
E K DL E L E EE + L E K + L E R+LKE E
Sbjct: 220 E----QSEKYEDLAQEIAHLRNELEEAQRSLESLEKKFRSEGGDLFEEREQLERQLKEIE 275
Query: 919 ----NVGESLRKDLLDTKTHLADSNF---EKDKYAKSNKDLREMVKKVESEKRDQARTID 971
LR+ D L N K + K + + + + E E+RD+ +
Sbjct: 276 AARKANRAQLRELAADPLPLLLIPNLLDSTKAQLQKEEQSQQNQLTQEELEERDK--ELL 333
Query: 972 EGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFL 1031
E L K+A+ + + + +L K +E SE L+
Sbjct: 334 ESLPKLAL--PAEHVKEIAAEL------AEIDKPATTDSEIPHRLSGSELTQLEV--LIQ 383
Query: 1032 EIEKEKYNFVISYLLCLFQVEVELSQVTK--DRSDLSHQLSLLQRKKENVVEDLARLKQK 1089
++++E + L L ++E EL++V K Q++ L + +L R + +
Sbjct: 384 QVKRELQDAKSQLLKELRELEEELAEVDKKISTIPSEEQIAQLLEELGEAQNELFRSEAE 443
Query: 1090 YEQSVEMNNRVNKNLEDLVKECEEKE 1115
E+ + + + +E L K +EK
Sbjct: 444 IEELLRQLETLKEAIEALRKTLDEKT 469
Score = 34.3 bits (79), Expect = 0.79
Identities = 55/299 (18%), Positives = 110/299 (36%), Gaps = 30/299 (10%)
Query: 1398 ARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQC 1457
+ ++ E+ EA + + + L + L+ L+E + +L L+++
Sbjct: 198 RKKSELPSSILSEIEALEAELKEQSEKYEDLAQEIAHLRNELEEAQRSLESLEKKFR--- 254
Query: 1458 RNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQ--TLQRNLMDTSLNSQSNCEK 1515
L E L+ + ++ + A EL + L NL+D++ E+
Sbjct: 255 SEGGDLFEEREQLERQLKEIEAARKANRAQLRELAADPLPLLLIPNLLDSTKAQLQKEEQ 314
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQAS---LAELRRQQVNRLENQDDLKAMTQALKREI 1572
+Q Q E + L E L + E+ + + + L
Sbjct: 315 SQQNQLTQEELEERDKELLESLPKLALPAEHVKEIAAELAEIDKPATTDSEIPHRL---- 370
Query: 1573 KDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVAR--AGL 1630
+ ++ + QQ R LQ+ K L + E E+ EV + + +
Sbjct: 371 -----SGSELTQLEVLIQQVKRELQDAKSQL--------LKELRELEEELAEVDKKISTI 417
Query: 1631 ESQLRMSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQ 1689
S+ +++Q E G E+ + E EL +LE L + I+ LR L+ + K++
Sbjct: 418 PSEEQIAQLLEEL---GEAQNELFRSEAEIEELLRQLETLKEAIEALRKTLDEKTKQKI 473
Score = 32.3 bits (74), Expect = 3.1
Identities = 75/378 (19%), Positives = 130/378 (34%), Gaps = 104/378 (27%)
Query: 525 DMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRS 584
D+ RL DL + + EL E++ L EAE++
Sbjct: 182 DLIDRLAGDLTN----VLRRRKKSELPSSILSEIEAL-----------EAELKEQSEKYE 226
Query: 585 DMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEH 644
D+ + I EL+ Q L SL S LF+ ++EQLE
Sbjct: 227 DLAQ-------EIAHLRNELEEAQRSLESLEKKFRSEGGDLFE----------EREQLER 269
Query: 645 EVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADY--QNQISNLKKQ 702
+++E+ E + +A L + A+ N + + K Q
Sbjct: 270 QLKEI---------------------EAARKANRAQLRELAADPLPLLLIPNLLDSTKAQ 308
Query: 703 NEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQ 762
L +E++ + L ++ EE+D EL
Sbjct: 309 -------------------------LQKEEQSQQNQL-------TQEELEERDKELLESL 336
Query: 763 ANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIA-----------QQDQKAIQDRLSQV 811
L H+ +I + + A D + ++ QQ ++ +QD SQ+
Sbjct: 337 PKLALPAEHVKEIAAELAEIDKPATTDSEIPHRLSGSELTQLEVLIQQVKRELQDAKSQL 396
Query: 812 LKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERK 871
LKEL E + L + ++ + +++ I L E+L +L + EE L R+
Sbjct: 397 LKELRELEEELAEVDKKISTIPSEEQ--IAQLLEELGEAQNELFRSEAEIEE----LLRQ 450
Query: 872 ISDLKSEREALVTESEEL 889
+ LK EAL +E
Sbjct: 451 LETLKEAIEALRKTLDEK 468
Score = 31.6 bits (72), Expect = 4.6
Identities = 71/360 (19%), Positives = 127/360 (35%), Gaps = 50/360 (13%)
Query: 291 SENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIAR 350
SE A+ E K++ E+ E+L + I L +EEA Q+ LE L+ R
Sbjct: 209 SEIEALEAELKEQSEKYEDLAQEIAHLRNELEEA----------QRSLESLEKKFRS--- 255
Query: 351 AVIQDAEGKDIPSRPAPLKRHATF--SARPSTSIKPSVTFRKETKLATHREQLHTMKKQY 408
EG D+ L+R +AR + + L L + K Q
Sbjct: 256 ------EGGDLFEEREQLERQLKEIEAARKANRAQLRELAADPLPLLLIPNLLDSTKAQL 309
Query: 409 ESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREIN 468
+ ++SQ N Q + D+ + VK I E EI
Sbjct: 310 QKEEQSQQN--QLTQEELEERDKELLESLPKLALPAEHVKEIAAELAEIDKPATTDSEIP 367
Query: 469 EMVESLNSN----LDKVQKNNSRLSKINESLQSEKLFLQ--------------NELDRIN 510
+ L + K + +K + +L + ++ ++
Sbjct: 368 HRLSGSELTQLEVLIQQVKRELQDAKSQLLKELRELEEELAEVDKKISTIPSEEQIAQLL 427
Query: 511 SDMDAREVELRGKE---DMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEK 567
++ + EL E + R E L A E L+ K + N E++ + +K
Sbjct: 428 EELGEAQNELFRSEAEIEELLRQLETLKEAIEALRKTLDEKTKQKINAFELERAITIADK 487
Query: 568 SKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFD 627
+K ++ E+LL ++ + E I + K+L R ++ L+ D E+ L+D
Sbjct: 488 AKKTLKEFREKLLE------RKLQQLEEEITKSFKKLMRKHNLISRLKIDPETFAVSLYD 541
>gnl|CDD|220623 pfam10186, Atg14, UV radiation resistance protein and
autophagy-related subunit 14. The Atg14 or Apg14
proteins are hydrophilic proteins with a predicted
molecular mass of 40.5 kDa, and have a coiled-coil motif
at the N terminus region. Yeast cells with mutant Atg14
are defective not only in autophagy but also in sorting
of carboxypeptidase Y (CPY), a vacuolar-soluble
hydrolase, to the vacuole. Subcellular fractionation
indicate that Apg14p and Apg6p are peripherally
associated with a membrane structure(s). Apg14p was
co-immunoprecipitated with Apg6p, suggesting that they
form a stable protein complex. These results imply that
Apg6/Vps30p has two distinct functions: in the
autophagic process and in the vacuolar protein sorting
pathway. Apg14p may be a component specifically required
for the function of Apg6/Vps30p through the autophagic
pathway. There are 17 auto-phagosomal component proteins
which are categorized into six functional units, one of
which is the AS-PI3K complex (Vps30/Atg6 and Atg14). The
AS-PI3K complex and the Atg2-Atg18 complex are essential
for nucleation, and the specific function of the AS-PI3K
apparently is to produce phosphatidylinositol
3-phosphate (PtdIns(3)P) at the pre-autophagosomal
structure (PAS). The localisation of this complex at the
PAS is controlled by Atg14. Autophagy mediates the
cellular response to nutrient deprivation, protein
aggregation, and pathogen invasion in humans, and
malfunction of autophagy has been implicated in multiple
human diseases including cancer. This effect seems to be
mediated through direct interaction of the human Atg14
with Beclin 1 in the human phosphatidylinositol 3-kinase
class III complex.
Length = 307
Score = 39.7 bits (93), Expect = 0.010
Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Query: 789 DKQQALLIAQQDQKAIQDRLSQVLKELEEE--KCTLDRIKRESAGRSEQDRNTINTLREQ 846
+ + L + + ++ ++ + L+ E K D +K E A + E+ +N +R +
Sbjct: 24 ELRLDLARLLLENEELKQKVEEALEGATNEDGKLAADLLKLEVARKKER----LNQIRAR 79
Query: 847 LNRTVAKLEELKTRTEEEKAILERKISDLKS-----------EREALVTESEELKVQLHL 895
+++ ++E+ + R EE K L ++ SDL S + E L E + + +L+
Sbjct: 80 ISQLKEEIEQKRERIEELKRALAQRRSDLSSASYQLEKRRASQLEKLQDEIKRTRSKLNA 139
Query: 896 SEDKVDTVQAQLLETARRL 914
+ ++ L +L
Sbjct: 140 LHSLLAEKRSFLCRELAKL 158
Score = 37.7 bits (88), Expect = 0.042
Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 21/139 (15%)
Query: 1432 QQRLQMLLQEKETNLHKLQERCEH------------QCRNITGLEERCTSLKTTIDQLNL 1479
+ L LL E E K++E E + +ER ++ I QL
Sbjct: 26 RLDLARLLLENEELKQKVEEALEGATNEDGKLAADLLKLEVARKKERLNQIRARISQLKE 85
Query: 1480 TLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDT 1539
+E+ EL+ + + +L +S + Q + QL+KL + + +L+
Sbjct: 86 EIEQKRERIEELKRALAQRRSDL--SSASYQLEKRRASQLEKLQDEIK----RTRSKLNA 139
Query: 1540 CQASLAELRR---QQVNRL 1555
+ LAE R +++ +L
Sbjct: 140 LHSLLAEKRSFLCRELAKL 158
Score = 32.0 bits (73), Expect = 2.8
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 525 DMNRRLRE------DLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMER 578
L E LL+ NE+LK + +E LE E L A + K +V + ER
Sbjct: 17 CARNSLYELRLDLARLLLENEELK--QKVEEALEGATNEDGKLAADLLKL--EVARKKER 72
Query: 579 LLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESL-----EAILFDTQSHLE 633
L + + +IS+ + IE + ++ L+ LA RSD S + + +
Sbjct: 73 L----NQIRARISQLKEEIEQKRERIEELKRALAQRRSDLSSASYQLEKRRASQLEKLQD 128
Query: 634 QSDVKKEQLEHEVQELLVKQESLKGQVVRL 663
+ + +L L K+ L ++ +L
Sbjct: 129 EIKRTRSKLNALHSLLAEKRSFLCRELAKL 158
Score = 31.6 bits (72), Expect = 3.9
Identities = 26/181 (14%), Positives = 66/181 (36%), Gaps = 27/181 (14%)
Query: 425 LTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKN 484
+ L + + LA++ E E L + +E E+L ++ K
Sbjct: 18 ARNSLYELRLDLARLLLENEELKQKVE--------------------EALEGATNEDGKL 57
Query: 485 NSRLSKINESLQSEKL-FLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKN 543
+ L K+ + + E+L ++ + ++ +++ + + + + R DL A+ L+
Sbjct: 58 AADLLKLEVARKKERLNQIRARISQLKEEIEQKRERIEELKRALAQRRSDLSSASYQLEK 117
Query: 544 AKLA-KELLEQNKEEMQTLLAHIEKSKGDVEAEMERLL-----LDRSDMNEQISKYEITI 597
+ + E L+ + ++ L + + + + R L L R +
Sbjct: 118 RRASQLEKLQDEIKRTRSKLNALHSLLAEKRSFLCRELAKLFPLRRVIRGRKGDSSSEPY 177
Query: 598 E 598
Sbjct: 178 T 178
Score = 31.2 bits (71), Expect = 4.8
Identities = 35/157 (22%), Positives = 53/157 (33%), Gaps = 18/157 (11%)
Query: 1398 ARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQC 1457
ARL E L+ + E + + L D +L++ +++ N +++ R
Sbjct: 30 ARLLLENEELK---QKVEEALEGATNEDGKLAADLLKLEVARKKERLN--QIRARISQLK 84
Query: 1458 RNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLK 1517
I ER LK + Q L AS + R Q ++ +
Sbjct: 85 EEIEQKRERIEELKRALAQRRSDLSSASYQLEKRRASQ----------LEKLQDEIKRTR 134
Query: 1518 QLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNR 1554
LHS EKR R A L LRR R
Sbjct: 135 SKLNALHSLLAEKRSFLCRE---LAKLFPLRRVIRGR 168
Score = 31.2 bits (71), Expect = 5.3
Identities = 31/160 (19%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 1294 DLKAMTQALKREIKD-LSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQS 1352
L + LK+++++ L A ++ A + A ++E+ L+Q +A +
Sbjct: 31 RLLLENEELKQKVEEALEGATNEDGKLAADLLKLEVARKKER------LNQIRARISQLK 84
Query: 1353 EAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELS 1412
E ++QK E ++ L+ + LS+ S + + R ++ LQDE+
Sbjct: 85 EEIEQKRERIEELKRALAQRRSDLSSASYQLEK-------------RRASQLEKLQDEIK 131
Query: 1413 RTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQER 1452
RT +++ AL + L + L L+
Sbjct: 132 RTRSKLN-------ALHSLLAEKRSFLCRELAKLFPLRRV 164
Score = 30.4 bits (69), Expect = 8.6
Identities = 32/148 (21%), Positives = 54/148 (36%), Gaps = 13/148 (8%)
Query: 485 NSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA 544
+ L ++ L L E + + ++ L G + + +L DLL K
Sbjct: 19 RNSLYELRLDLAR----LLLENEELKQKVEEA---LEGATNEDGKLAADLLKLEVARKKE 71
Query: 545 KLA--KELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDM----NEQISKYEITIE 598
+L + + Q KEE++ IE+ K + L + Q+ K + I+
Sbjct: 72 RLNQIRARISQLKEEIEQKRERIEELKRALAQRRSDLSSASYQLEKRRASQLEKLQDEIK 131
Query: 599 ANDKELQRLQEQLASLRSDKESLEAILF 626
+L L LA RS A LF
Sbjct: 132 RTRSKLNALHSLLAEKRSFLCRELAKLF 159
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor
protein; Reviewed.
Length = 782
Score = 40.2 bits (95), Expect = 0.012
Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 834 EQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQL 893
E+ + I +E+LN +A LEEL+ E++ E + + + +E L + E+L+ +
Sbjct: 505 EEAKKLIGEDKEKLNELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEE 564
Query: 894 HLSEDKVDTVQAQLLETARRLKEAENVGESLR------------KDLLDTKTHLADSNFE 941
++ + Q ++ A+ KEA+ + + LR +L++ + L +N +
Sbjct: 565 DKLLEEAEKEAQQAIKEAK--KEADEIIKELRQLQKGGYASVKAHELIEARKRLNKANEK 622
Query: 942 KDKYAKSNK 950
K+K K K
Sbjct: 623 KEKKKKKQK 631
Score = 37.5 bits (88), Expect = 0.074
Identities = 28/115 (24%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 640 EQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNL 699
E+LE E+++ + E+L + +L +ELE+ +++ QE + L+++A + + Q I
Sbjct: 526 EELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEA---EKEAQQAIKEA 582
Query: 700 KKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEK 754
KK+ +E + +L + + + +L E ++++ A EKK KQ +++
Sbjct: 583 KKEADEIIKELRQLQKGGYASVKA--HELIEARKRLNKANEKKEKKKKKQKEKQE 635
Score = 35.2 bits (82), Expect = 0.43
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 7/106 (6%)
Query: 1514 EKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIK 1573
+K ++ + LL AE K L+E+ + Q +L + E Q +K + IK
Sbjct: 534 QKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEA--EKEAQQAIKEAKKEADEIIK 591
Query: 1574 DLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNE 1619
+L ++ K A L E + L + + Q E
Sbjct: 592 EL-----RQLQKGGYASVKAHELIEARKRLNKANEKKEKKKKKQKE 632
Score = 31.3 bits (72), Expect = 5.9
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 693 QNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITE 752
+ L+++ EE L +E LK++ EE KL EE++++ EK+ +K+ +
Sbjct: 526 EELERELEQKAEE-AEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAEKEAQQAIKEAKK 584
Query: 753 EKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRL 808
E D + L+ + + + +A + + ++ QK Q+ L
Sbjct: 585 EADEIIKELRQLQKGGYASVKA--HELIEA-RKRLNKANEKKEKKKKKQKEKQEEL 637
>gnl|CDD|218806 pfam05911, DUF869, Plant protein of unknown function (DUF869). This
family consists of a number of sequences found in
Arabidopsis thaliana, Oryza sativa and Lycopersicon
esculentum (Tomato). The function of this family is
unknown.
Length = 767
Score = 39.6 bits (92), Expect = 0.017
Identities = 45/271 (16%), Positives = 103/271 (38%), Gaps = 18/271 (6%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHT--------QESNKMAQAQQTMRALQEEK 1334
+++I +D++A +L+R + +ES+ + + Q +
Sbjct: 450 HIISEISEILEDIEAELDSLERSSNGDDENEEVAMVGSLVEESSAVIERSQELEGAVSRI 509
Query: 1335 YALETKLSQTKAAANSQSEA---MDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLM 1391
+ L + +++ +E E V+ E +L +VS E S+ +
Sbjct: 510 SEFTSVLEHEVTVCQDLLDGKADLEKFIQEFSLTLEWVVNQEKSLQDVSVEASEIKKNFL 569
Query: 1392 KCRESGARL-------DAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKET 1444
+ S + A + +EL ++ L+ + + D + + LQE E
Sbjct: 570 GLKSSEKEINSPDEVKGAVCISTLEELETLKSEKENLDGELSKCKDDLEESKNKLQETEK 629
Query: 1445 NLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMD 1504
L +L+ + + + E + + + + L L + A L+ +I +L+ L
Sbjct: 630 KLEELKSELDASQESNSLAETQLKCMVESYESLELRAKDLEAEHKSLQEKISSLEDELEK 689
Query: 1505 TSLNSQSNCEKLKQLQKLLHSAENEKRVLQE 1535
N Q K ++L++ + AE E+ + +
Sbjct: 690 ERQNHQELIAKCRELEEKIERAEQEENMQKL 720
Score = 35.3 bits (81), Expect = 0.38
Identities = 58/314 (18%), Positives = 128/314 (40%), Gaps = 35/314 (11%)
Query: 427 SQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVE-----SLNSNLDKV 481
++ Q+ +L + + +E + E +LE++ +E E SL V
Sbjct: 436 PEVLQSVLKLVMEKHIISEISEILEDIEAELDSLERSSNGDDENEEVAMVGSLVEESSAV 495
Query: 482 QKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDL 541
+ + L + L++E+ +D GK D+ + ++E L +
Sbjct: 496 IERSQELEGAVSRISEFTSVLEHEVTVCQDLLD-------GKADLEKFIQEFSLTLEWVV 548
Query: 542 KNAKLAKELLEQNKEEMQTLLAHIEKSKGDV-------------EAEMERLLLDRSDMNE 588
K +++ + E + L K E+E L ++ +++
Sbjct: 549 NQEKSLQDVSVEASEIKKNFLGLKSSEKEINSPDEVKGAVCISTLEELETLKSEKENLDG 608
Query: 589 QISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQE 648
++SK + +E + +LQ +++L L+S+ ++ + ++ L+ E LE ++
Sbjct: 609 ELSKCKDDLEESKNKLQETEKKLEELKSELDASQESNSLAETQLKCMVESYESLELRAKD 668
Query: 649 LLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVT 708
L + +SL+ ++ L ELE + QE A + + +I + + EE +
Sbjct: 669 LEAEHKSLQEKISSLEDELEKERQNHQELIAKCR--------ELEEKIE--RAEQEENMQ 718
Query: 709 KLTEEKINLKKQNE 722
KL EE+ +K++ E
Sbjct: 719 KLDEEEQKIKQEKE 732
Score = 34.2 bits (78), Expect = 0.77
Identities = 60/350 (17%), Positives = 149/350 (42%), Gaps = 13/350 (3%)
Query: 442 EKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLF 501
EK A++ K + K + + + K + RL ++ +S+ + +
Sbjct: 389 EKLAMLPPESSADGSKVSSPKCSDSSVALTGPVEHEDNLESKLSDRLPEVLQSV-LKLVM 447
Query: 502 LQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTL 561
++ + I+ ++ E EL E + E+ +A + + + + +E++
Sbjct: 448 EKHIISEISEILEDIEAELDSLERSSNGDDENEEVA--MVGSLVEESSAVIERSQELEGA 505
Query: 562 LAHIEKSKGDVEAEM---ERLLLDRSDMNEQISKYEITIE---ANDKELQRLQEQLASLR 615
++ I + +E E+ + LL ++D+ + I ++ +T+E +K LQ + + + ++
Sbjct: 506 VSRISEFTSVLEHEVTVCQDLLDGKADLEKFIQEFSLTLEWVVNQEKSLQDVSVEASEIK 565
Query: 616 SDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQ 675
+ L++ + S E E++ L ++E+L G++ + +LE+++ + Q
Sbjct: 566 KNFLGLKSSEKEINSPDEVKGAVCISTLEELETLKSEKENLDGELSKCKDDLEESKNKLQ 625
Query: 676 ETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQV 735
ET+ L + S LDA + ++L + +C+ + E K E L E+ +
Sbjct: 626 ETEKKLEELKSELDA--SQESNSLAETQLKCMVESYESLELRAKDLEAEHKSLQEKISSL 683
Query: 736 RAAL--EKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDAL 783
L E++ H + E + ++ R + + ++ + E +
Sbjct: 684 EDELEKERQNHQELIAKCRELEEKIERAEQEENMQKLDEEEQKIKQEKEI 733
>gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein. This family consists
of several eukaryotic mitotic checkpoint (Mitotic arrest
deficient or MAD) proteins. The mitotic spindle
checkpoint monitors proper attachment of the bipolar
spindle to the kinetochores of aligned sister chromatids
and causes a cell cycle arrest in prometaphase when
failures occur. Multiple components of the mitotic
spindle checkpoint have been identified in yeast and
higher eukaryotes. In S.cerevisiae, the existence of a
Mad1-dependent complex containing Mad2, Mad3, Bub3 and
Cdc20 has been demonstrated.
Length = 722
Score = 39.1 bits (91), Expect = 0.021
Identities = 103/506 (20%), Positives = 206/506 (40%), Gaps = 53/506 (10%)
Query: 221 DIKRSFTAMQSATEQDLSKIRSDLNQ--STRQMSGACNGLVALSAGSSATNAEKDKLVKE 278
D + + T M A + S +RSDL + S G+ + S E+ + +
Sbjct: 2 DGESNTTVM--ADGGNQSILRSDLPKFLSQPLEGSHHLGVSTSALSSLQKQVEESMTLLQ 59
Query: 279 NSELK-SQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQE 337
+EL S+ +++ EN M E + K ++E L ++ TL E L +E +
Sbjct: 60 RAELIRSKSKLIQLENELMQKELEHKRAQIE-LERKASTLAENYERELDRNLELEVRLKA 118
Query: 338 LELLQNTLRDIARAVIQDAE--------------------GKDIPSRPAPLKRHATFSAR 377
LE L+ + A ++A+ K+ + +K +
Sbjct: 119 LEELEKKAENEAAEAEEEAKLLKDKLDAESLKLQNEKEDQLKEAKESISRIKNDLSEMQC 178
Query: 378 PSTSIKPSVTFRKETKLATHREQLHTMKKQYESADE----------SQYNMSQQVTSLTS 427
+ + + E++L REQL +K+ A++ S + S ++ L
Sbjct: 179 RAQNADTELK-LLESELEELREQLEECQKELAEAEKKLQSLTSEQASSADNSVKIKHLEE 237
Query: 428 QLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNK--REINEMVESLNSNLDKVQKNN 485
+L + + V KE L++ E+ R + E+N+ R + E E L L+ +Q
Sbjct: 238 ELKRYEQDAEVVKSMKEQLLQIPELERELAALREENRKLRSMKEDNELLKEELEDLQSRL 297
Query: 486 SRLSKINE---SLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRR----------LRE 532
R K+ E L+ EK L+NEL S + + LR +D++RR L+E
Sbjct: 298 ERFEKMREKLADLELEKEKLENELKSWKSLLQDIGLNLRTPDDLSRRIVVLQNEELQLKE 357
Query: 533 DLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISK 592
+ K + + L+ +++ + + ++K ++A + RL + + ++
Sbjct: 358 KNGSISSSAKQLETTLQQLQLERQKAVSEILELKKKLEALKALVRRLQRRLTLVTKERDG 417
Query: 593 YEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVK 652
+ + DKEL ++ +E E ++ QSHL + + + +LE +V + +
Sbjct: 418 LRAILNSYDKELTETSVSGQLMKRLEE-AEDLVQKVQSHLAKMENQLSELEEDVGQQKDR 476
Query: 653 QESLKGQVVRLNKELEDTEKRAQETK 678
+L+ ++ L ++L E+ K
Sbjct: 477 NNTLETEIKLLKEQLVSNERLLSFVK 502
Score = 39.1 bits (91), Expect = 0.023
Identities = 88/440 (20%), Positives = 173/440 (39%), Gaps = 46/440 (10%)
Query: 633 EQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADY 692
E + + +E + ++ L + ++L E ED K A+E+ + + S +
Sbjct: 121 ELEKKAENEAAEAEEEAKLLKDKLDAESLKLQNEKEDQLKEAKESISRIKNDLSEMQCRA 180
Query: 693 QNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRA--------------- 737
QN + LK L E L++Q EEC +L E ++++++
Sbjct: 181 QNADTELK--------LLESELEELREQLEECQKELAEAEKKLQSLTSEQASSADNSVKI 232
Query: 738 -ALEKKLH-----ATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEG--D 789
LE++L A V + +E+ ++ L+ L L+ K+ ED L E D
Sbjct: 233 KHLEEELKRYEQDAEVVKSMKEQLLQIPELERELAALREENRKLRSMKEDNELLKEELED 292
Query: 790 KQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNR 849
Q L ++ ++ + D ++ KE E + + + G + + + ++ L
Sbjct: 293 LQSRLERFEKMREKLAD--LELEKEKLENELKSWKSLLQDIGLNLRTPDDLSRRIVVLQN 350
Query: 850 TVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLE 909
+L+E LE + L+ ER+ V+E ELK +L + V +Q +L
Sbjct: 351 EELQLKEKNGSISSSAKQLETTLQQLQLERQKAVSEILELKKKLEALKALVRRLQRRLTL 410
Query: 910 TARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQART 969
+ + S K+L +T + K ++ ++V+KV+S
Sbjct: 411 VTKERDGLRAILNSYDKELTETS--------VSGQLMKRLEEAEDLVQKVQSHLAKMENQ 462
Query: 970 IDE-----GLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLDSEKVTL 1024
+ E G QK + E + L+ QL ++ +K+ L+ E+ L
Sbjct: 463 LSELEEDVGQQKDRNNTLETEIKLLKEQLVSNERLLSFVKEATNALRLKIETLERERDRL 522
Query: 1025 QEKCKFLEIEKEKYNFVISY 1044
+++ LE++ E Y
Sbjct: 523 RQEKSLLEMKLEHLCLQGDY 542
>gnl|CDD|225747 COG3206, GumC, Uncharacterized protein involved in exopolysaccharide
biosynthesis [Cell envelope biogenesis, outer membrane].
Length = 458
Score = 39.0 bits (91), Expect = 0.025
Identities = 51/283 (18%), Positives = 106/283 (37%), Gaps = 23/283 (8%)
Query: 1314 TQESNKMAQAQQTMRALQEEKYALETKLSQTKAAA---NSQSEAM--DQKNEELQHLREK 1368
+ + + ++ + +RA + L + K AA N+ ++A DQ +L+ R
Sbjct: 137 SYRLDDLLESLKVLRAGRSRVIELSYTSNDPKLAAKLANALAQAYLADQLEAQLEAFRRA 196
Query: 1369 VLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVAL 1428
+L+ L + + + ++ R DA + L E A T+L+ R L
Sbjct: 197 SDSLDERLEELRARLQEAEAQVEDFRAQHGLTDAARGQLLSEQQ-LSALNTQLQSARARL 255
Query: 1429 EGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGE 1488
+ RL LLQ R + I L ++ ++ I L+ L
Sbjct: 256 AQAEARLASLLQLLPLGREAAALREVLESPTIQDLRQQYAQVRQQIADLSTELGAKHPQL 315
Query: 1489 TELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELR 1548
L ++ L++ + +L+++L S NE +L+++ + LA+L+
Sbjct: 316 VALEAQLAELRQQIAA-------------ELRQILASLPNELALLEQQEAALEKELAQLK 362
Query: 1549 RQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQ 1591
+ + Q L + L+RE + + + +
Sbjct: 363 GRLSKLPKLQVQL----RELEREAEAARSLYETLLQRYQELSI 401
>gnl|CDD|214360 CHL00094, dnaK, heat shock protein 70.
Length = 621
Score = 38.9 bits (91), Expect = 0.025
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 269 NAEKDKLVKENSELKSQVTVL--KSENNAMANESKQKEERVEELLKRIHTLEARVEEADQ 326
NA +DK +E +LK+Q L ++E + K EE+ E++ I L ++ +
Sbjct: 517 NAAEDKEKREKIDLKNQAESLCYQAEKQLKELKDKISEEKKEKIENLIKKLRQALQNDN- 575
Query: 327 NVLLVEEMQQELELLQNTLRDIARAVIQDAEGKD 360
E ++ LE LQ L +I + V D
Sbjct: 576 ----YESIKSLLEELQKALMEIGKEVYSSTSTTD 605
>gnl|CDD|227606 COG5281, COG5281, Phage-related minor tail protein [Function
unknown].
Length = 833
Score = 38.9 bits (90), Expect = 0.030
Identities = 60/345 (17%), Positives = 112/345 (32%), Gaps = 18/345 (5%)
Query: 1304 REIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQ 1363
+ L+D + + + + A Q E+ A + T AAA + +EA ++
Sbjct: 258 KAFSKLTDDPVNGAKALNRQFHYLTAAQLEQIAALQRAGDTAAAAAAAAEAAAAMDDRTA 317
Query: 1364 HLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLEL 1423
++E + TLE +++ + D ++ + L E ARVT
Sbjct: 318 RVKENMGTLETAWDALADAAKKMWDAVLGIGREDKQAALLAAKLAAE---KLARVTA--- 371
Query: 1424 QRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLER 1483
+ AL + Q L + E N + + +E + L
Sbjct: 372 -QGALNARLKLAQDDLTQAELNYAAADQAANQEGALNAREDEAEVLSTQEERRDILKNLL 430
Query: 1484 ASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQAS 1543
A A + R E + N + K Q+ + E + R + Q
Sbjct: 431 ADAEKRTARQE----ELNKALAKAKILQADKAAKAYQEDILQREAQSRGKTAAAERSQEQ 486
Query: 1544 LAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYAL 1603
+ + + + DL + + L +E + + + R LQE+K L
Sbjct: 487 MTAALKALLAFQQQIADLSGAKEKASDQKSLLW--KAEEQYALLKEEAKQRQLQEQKALL 544
Query: 1604 ETK-----LSQTKAAANSQNELEVKEVARAGLESQLRMSQWPSES 1643
E K + A Q + A+A + R S E+
Sbjct: 545 EHKKETLEYTSQLAELLDQQADRFELSAQAAGSQKERGSDLYREA 589
Score = 31.1 bits (70), Expect = 7.3
Identities = 33/185 (17%), Positives = 55/185 (29%), Gaps = 9/185 (4%)
Query: 659 QVVRLNKELEDTEKRAQETKASLVQQASGL------DADYQNQISNLKKQNEECVTKLTE 712
LN D + + +A L +N +++ +K+
Sbjct: 387 TQAELNYAAADQAANQEGALNAREDEAEVLSTQEERRDILKNLLADAEKRTARQEELNKA 446
Query: 713 EKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRL--QANLCQLQS 770
Q ++ E+ Q A K A + + + L Q + L
Sbjct: 447 LAKAKILQADKAAKAYQEDILQREAQSRGKTAAAERSQEQMTAALKALLAFQQQIADLSG 506
Query: 771 HIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESA 830
+K Q L +AE A+Q Q Q L + KE E L + + A
Sbjct: 507 AKEKASDQKSL-LWKAEEQYALLKEEAKQRQLQEQKALLEHKKETLEYTSQLAELLDQQA 565
Query: 831 GRSEQ 835
R E
Sbjct: 566 DRFEL 570
>gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein. This entry is a highly
conserved protein present in eukaryotes.
Length = 680
Score = 38.7 bits (90), Expect = 0.030
Identities = 43/197 (21%), Positives = 78/197 (39%), Gaps = 27/197 (13%)
Query: 1426 VALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERAS 1485
LE D ++LQ LQ+ N +L+ + L+ LK D L L
Sbjct: 409 ERLEQDIKKLQAELQQARQNESELRNQISLLTSLERSLKSDLGQLKKENDMLQTKLNSMV 468
Query: 1486 AGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLA 1545
+ + + + +Q++++ L +S + +K L EK+ +E +T + A
Sbjct: 469 SAKQKDKQSMQSMEKRL-------KSEADSRVNAEKQLA---EEKKRKKEEEETAARAAA 518
Query: 1546 ELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALET 1605
+ +R E + LK Q L+ EIK L + ++ +EE LE
Sbjct: 519 Q---AAASREECAESLKQAKQDLEMEIKKL--------------EHDLKLKEEECRMLEK 561
Query: 1606 KLSQTKAAANSQNELEV 1622
+ + + S+ E EV
Sbjct: 562 EAQELRKYQESEKETEV 578
Score = 34.9 bits (80), Expect = 0.46
Identities = 58/306 (18%), Positives = 109/306 (35%), Gaps = 55/306 (17%)
Query: 356 AEGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQ 415
A I S+ + +H+ + S+ S + + K++ S S
Sbjct: 320 AAAGSIGSKSSKSAKHSNRNKSNSSPKSHSSANGSVPSSSVSDNE---SKQKRASKSSSG 376
Query: 416 YNMSQQVTSLTSQLDQTKAQLAQVGREK----EALVKNIEMLRVEKSALEKNKREINEMV 471
S++ S S + + + E L ++I+ L+ E +N+ E+ +
Sbjct: 377 ARDSKKDASGMSANGTVENCIPENKISTPSAIERLEQDIKKLQAELQQARQNESELRNQI 436
Query: 472 ESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLR 531
L S ++ + +L K N+ LQ+ ++NS + A++ + + + M +RL+
Sbjct: 437 SLLTSLERSLKSDLGQLKKENDMLQT----------KLNSMVSAKQKDKQSMQSMEKRLK 486
Query: 532 EDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQIS 591
E K+L E+ K R E+ +
Sbjct: 487 S------EADSRVNAEKQLAEEKK---------------------------RKKEEEETA 513
Query: 592 KYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLV 651
A +E E SL+ K+ LE + + L+ + + LE E QEL
Sbjct: 514 ARAAAQAAASRE-----ECAESLKQAKQDLEMEIKKLEHDLKLKEEECRMLEKEAQELRK 568
Query: 652 KQESLK 657
QES K
Sbjct: 569 YQESEK 574
Score = 33.7 bits (77), Expect = 1.2
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 234 EQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSEN 293
EQD+ K++++L Q+ + S N + L++ + ++ +L KEN L++++ N
Sbjct: 412 EQDIKKLQAELQQARQNESELRNQISLLTSLERSLKSDLGQLKKENDMLQTKL------N 465
Query: 294 NAMANESKQKEERVEELLKRIHTLEARV-EEADQNVLLVEEMQQELELLQNTLRDIARAV 352
+ + +KQK++ + + ++E R+ EAD V +++ +E + + ARA
Sbjct: 466 SMV--SAKQKDK------QSMQSMEKRLKSEADSRVNAEKQLAEEKKRKKEEEETAARAA 517
Query: 353 IQDA 356
Q A
Sbjct: 518 AQAA 521
Score = 33.4 bits (76), Expect = 1.3
Identities = 59/285 (20%), Positives = 105/285 (36%), Gaps = 52/285 (18%)
Query: 362 PSRPAPLKRHATFSARPSTSI-KPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQ 420
+ P I PS R E + + +L ++ ++ +
Sbjct: 382 KDASGMSANGTVENCIPENKISTPSAIERLEQDIKKLQAELQQARQ-------NESELRN 434
Query: 421 QVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNS---- 476
Q++ LTS K+ L Q+ +E + L + + SA +K+K+ + M + L S
Sbjct: 435 QISLLTSLERSLKSDLGQLKKENDMLQTKLNSM---VSAKQKDKQSMQSMEKRLKSEADS 491
Query: 477 --NLDKVQKNNSRLSKINE-------------------SLQSEKLFLQNELDRINSDMDA 515
N +K + K E SL+ K L+ E+ ++ D+
Sbjct: 492 RVNAEKQLAEEKKRKKEEEETAARAAAQAAASREECAESLKQAKQDLEMEIKKLEHDLKL 551
Query: 516 REVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAE 575
+E E R E + LR+ E K E+L + MQ +E S + AE
Sbjct: 552 KEEECRMLEKEAQELRK----YQESEKET----EVLMSALQAMQDKNLMLENS---LSAE 600
Query: 576 MERLLLD----RSDMNEQISKYEITIEANDKELQRLQEQLASLRS 616
RL LD D+ Q+ I + E+ L+ ++A + +
Sbjct: 601 T-RLKLDLFSALGDVKRQLEIAHGAIYKREAEIVDLKSKIADILA 644
Score = 30.7 bits (69), Expect = 9.6
Identities = 39/211 (18%), Positives = 87/211 (41%), Gaps = 13/211 (6%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
+ ++E++ L+A Q ++ +L + + ++ + + L++E L+TKL+
Sbjct: 406 SAIERLEQDIKKLQAELQQARQNESELRNQISLLTSLERSLKSDLGQLKKENDMLQTKLN 465
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDA 1402
+A ++M + L+ + + E L+ + K + ++ A
Sbjct: 466 SMVSAKQKDKQSMQSMEKRLKSEADSRVNAEKQLAEEKKRKKEEEET------------A 513
Query: 1403 EKRALQDELSRTE-ARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNIT 1461
+ A Q SR E A K Q + +E + + L+E+E + + + + + +
Sbjct: 514 ARAAAQAAASREECAESLKQAKQDLEMEIKKLEHDLKLKEEECRMLEKEAQELRKYQESE 573
Query: 1462 GLEERCTSLKTTIDQLNLTLERASAGETELR 1492
E S + NL LE + + ET L+
Sbjct: 574 KETEVLMSALQAMQDKNLMLENSLSAETRLK 604
Score = 30.7 bits (69), Expect = 9.6
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 739 LEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQ 798
LE+ L + + Q+ +E D ++L + + Q DK Q + L++E D +
Sbjct: 442 LERSLKSDLGQLKKENDMLQTKLNSMVSAKQK--DKQSMQSMEKRLKSEADSRVNA---- 495
Query: 799 QDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELK 858
+ +L++ K +EE+ T R ++A E+ ++ ++ L + KLE
Sbjct: 496 ------EKQLAEEKKRKKEEEETAARAAAQAAASREECAESLKQAKQDLEMEIKKLEHDL 549
Query: 859 TRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQL 907
EEE +LE++ +L+ +E+ E+E L L +DK ++ L
Sbjct: 550 KLKEEECRMLEKEAQELRKYQES-EKETEVLMSALQAMQDKNLMLENSL 597
>gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function
unknown].
Length = 652
Score = 38.5 bits (90), Expect = 0.032
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 808 LSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAI 867
L++ L +++EE RE G E++R I +++ KLEE R EEE +
Sbjct: 390 LAEALSKVKEE-----ERPREKEGTEEEERREITVYEKRIK----KLEETVERLEEENSE 440
Query: 868 LERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETA---RRLKEAENVGESL 924
L+R++ +LK E E L +E E + ++ K ++A+ + L+E + E L
Sbjct: 441 LKRELEELKREIEKLESELERFRREVRDKVRKDREIRARDRRIERLEKELEEKKKRVEEL 500
Query: 925 RKDLLDTKT 933
+ L + +
Sbjct: 501 ERKLAELRK 509
Score = 33.5 bits (77), Expect = 1.0
Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 560 TLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKE 619
L + K K + + + +I+ YE I+ ++ ++RL+E+ + L+ + E
Sbjct: 389 PLAEALSKVKEEERPREKEG--TEEEERREITVYEKRIKKLEETVERLEEENSELKRELE 446
Query: 620 SLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKA 679
L+ + +S LE+ + + +E+ + ++ RL KELE+ +KR +E +
Sbjct: 447 ELKREIEKLESELERFRREVRDKVRKDREIRARDR----RIERLEKELEEKKKRVEELER 502
Query: 680 SL 681
L
Sbjct: 503 KL 504
Score = 32.8 bits (75), Expect = 2.3
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 441 REKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKL 500
E R E + EK +++ E VE L ++ NS L + E L+ E
Sbjct: 401 ERPREKEGTEEEERREITVYEKRIKKLEETVERL-------EEENSELKRELEELKREIE 453
Query: 501 FLQNELDRINSDMDA---REVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLE 552
L++EL+R ++ ++ E+R ++ RL ++L + + +L ++L E
Sbjct: 454 KLESELERFRREVRDKVRKDREIRARDRRIERLEKEL--EEKKKRVEELERKLAE 506
Score = 32.4 bits (74), Expect = 3.1
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 1651 EEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLYIYRDTRAGKEMQQLR 1706
E + +L E SEL+ +LE L +I+ L +L +R + R +E++
Sbjct: 429 ETVERLEEENSELKRELEELKREIEKLESEL-ERFRRE---VRDKVRKDREIRARD 480
>gnl|CDD|234172 TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family.
Members of this protein family are homologs of ClpB, an
ATPase associated with chaperone-related functions.
These ClpB homologs, designated ClpV1, are a key
component of the bacterial pathogenicity-associated type
VI secretion system [Protein fate, Protein and peptide
secretion and trafficking, Cellular processes,
Pathogenesis].
Length = 852
Score = 38.8 bits (91), Expect = 0.033
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 801 QKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTR 860
Q A L + + + + LD ++RE+A ++ D + LR +L A+L L+ R
Sbjct: 414 QNATPAALEDLRRRIAALELELDALEREAALGADHD-ERLAELRAELAALEAELAALEAR 472
Query: 861 TEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEA 917
++EK ++E + + R L +++ D ++AQL E L A
Sbjct: 473 WQQEKELVEA----ILALRAELEADADA-------PADDDAALRAQLAELEAALASA 518
Score = 31.5 bits (72), Expect = 5.0
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 1502 LMDT-----SLNSQSNCEKLKQLQKLLHSAENEKRVL----------QERLDTCQASLAE 1546
L+DT +L+ + L+ L++ + + E E L ERL +A LA
Sbjct: 402 LLDTACARVALSQNATPAALEDLRRRIAALELELDALEREAALGADHDERLAELRAELAA 461
Query: 1547 LR---RQQVNRLENQDDLKAMTQALKREIKDLSDAHTQE----SNKMAQAQQTMRALQEE 1599
L R + + +L AL+ E++ +DA + ++A+ + + + Q E
Sbjct: 462 LEAELAALEARWQQEKELVEAILALRAELEADADAPADDDAALRAQLAELEAALASAQGE 521
Query: 1600 K 1600
+
Sbjct: 522 E 522
Score = 30.7 bits (70), Expect = 8.2
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 1360 EELQHLREKVLTLELTLSNVSEEKSQG---DDKLMKCRESGARLDAEKRALQDELSRTEA 1416
L+ LR ++ LEL L + E + G D++L + R A L+AE AL+ + +
Sbjct: 419 AALEDLRRRIAALELELDALEREAALGADHDERLAELRAELAALEAELAALEARWQQEKE 478
Query: 1417 RVTKLELQRVALEGDQ-------QRLQMLLQEKETNLHKLQ 1450
V + R LE D L+ L E E L Q
Sbjct: 479 LVEAILALRAELEADADAPADDDAALRAQLAELEAALASAQ 519
>gnl|CDD|130141 TIGR01069, mutS2, MutS2 family protein. Function of MutS2 is
unknown. It should not be considered a DNA mismatch
repair protein. It is likely a DNA mismatch binding
protein of unknown cellular function [DNA metabolism,
Other].
Length = 771
Score = 38.6 bits (90), Expect = 0.037
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 834 EQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQL 893
EQ + +E++N + KL L+ E++ LE+ + + + ++ L E EELK +
Sbjct: 500 EQAKTFYGEFKEEINVLIEKLSALEKELEQKNEHLEKLLKEQEKLKKELEQEMEELKERE 559
Query: 894 HLSEDKVDTVQAQLLETARRLKEAENV-GESLRKDLLDTKTHLADSNFEKDKYAKSNK 950
+ +++ + L+ + KE E++ E K + K + + K K K
Sbjct: 560 RNKKLELEKEAQEALKALK--KEVESIIRELKEKKIHKAKEIKSIEDLVKLKETKQKI 615
Score = 36.0 bits (83), Expect = 0.25
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 633 EQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADY 692
E+ +V E+L +EL K E L+ + K ++ E+ +E K + L+ +
Sbjct: 511 EEINVLIEKLSALEKELEQKNEHLEKLLKEQEKLKKELEQEMEELKERERNKKLELEKEA 570
Query: 693 QNQISNLKKQNEECVTKLTEEKINLKK--QNEECVTKLTEEKEQV 735
Q + LKK+ E + +L E+KI+ K ++ E + KL E K+++
Sbjct: 571 QEALKALKKEVESIIRELKEKKIHKAKEIKSIEDLVKLKETKQKI 615
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton].
Length = 1463
Score = 38.5 bits (90), Expect = 0.041
Identities = 50/310 (16%), Positives = 110/310 (35%), Gaps = 21/310 (6%)
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFL----QNEL 506
E ++ K E ++ K + K SL+++K F +
Sbjct: 811 EYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIY 870
Query: 507 DRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIE 566
+ ++ E +L+ + + I++ L N +L E++E K L+ ++E
Sbjct: 871 LQSAQRVELAERQLQELKIDVKS------ISSLKLVNLELESEIIELKKSLSSDLIENLE 924
Query: 567 KSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILF 626
K ++ A +++LL + +Y EL +L E + L+ E E +L
Sbjct: 925 -FKTELIARLKKLLNNIDLEEGPSIEYVKL-----PELNKLHEVESKLKETSEEYEDLLK 978
Query: 627 DTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQAS 686
+ + + + +L++ +E L + G + K+L++ S + S
Sbjct: 979 KSTILVREGNKANSELKNFKKE-LAELSKQYGALQESTKQLKELP-VEVAELQSASKIIS 1036
Query: 687 GLDADYQNQ--ISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRA-ALEKKL 743
+ + LK +L LK + E + + + L K +
Sbjct: 1037 SESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENLLKTI 1096
Query: 744 HATVKQITEE 753
+ ++T
Sbjct: 1097 NVKDLEVTNR 1106
Score = 33.1 bits (76), Expect = 1.8
Identities = 75/494 (15%), Positives = 151/494 (30%), Gaps = 38/494 (7%)
Query: 652 KQESLKGQVVRLN--KELEDTEKRAQETK------ASLVQQASGLDADYQNQISNLKKQN 703
+ LK + + L + +E E++ QE K +SL L+++ +L
Sbjct: 860 RFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDL 919
Query: 704 EECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLH---ATVKQITEEKDCELSR 760
E + TE LKK + E V+ KLH + +K+ +EE + L +
Sbjct: 920 IENLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKK 979
Query: 761 LQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKC 820
+ + ++ + + L AE KQ L Q L+ +
Sbjct: 980 STILVREGNKANSEL-KNFKKEL--AELSKQYGALQESTKQLKELPVEVAELQSASKIIS 1036
Query: 821 TLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKS--- 877
+ + L + N+ A+ + LK R E ++ +
Sbjct: 1037 SESTELSILKPLQKLKGL----LLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENL 1092
Query: 878 EREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTK--THL 935
+ V + E L + + + AQ++ +L + + + L + + +
Sbjct: 1093 LKTINVKDLEVTNRNLVKPANVLQFIVAQMI----KLNLLQEISKFLSQLVNTLEPVFQK 1148
Query: 936 ADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQL-- 993
+ +L + + R L + E L+N+L
Sbjct: 1149 LSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIA 1208
Query: 994 ---NDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQ 1050
S K + L +E S + + + L
Sbjct: 1209 LFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNNLNKKFDTPASMS---NEKLLSLL 1265
Query: 1051 VEVELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMN--NRVNKNLEDLV 1108
++ + + ++ + V L+ K S+ VN N E+L
Sbjct: 1266 NSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTK-ASSLRWKSATEVNYNSEELD 1324
Query: 1109 KECEEKEVVLLDLC 1122
C E E+ +D
Sbjct: 1325 DWCREFEISDVDEE 1338
>gnl|CDD|240419 PTZ00440, PTZ00440, reticulocyte binding protein 2-like protein;
Provisional.
Length = 2722
Score = 38.3 bits (89), Expect = 0.046
Identities = 106/601 (17%), Positives = 233/601 (38%), Gaps = 119/601 (19%)
Query: 436 LAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESL 495
L Q + L +IE + E+ LE K +I +L + K+ E
Sbjct: 723 LNQYTIKYNDLKSSIEEYKEEEEKLEVYKHQIINRKNEFILHLYENDKDLPDGKNTYEEF 782
Query: 496 QSEKLFLQNELDRINSDMDAREVELRGKEDM---------------------NRRLREDL 534
K + N+ ++I++D++ + + +D+ ++L +
Sbjct: 783 LQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEAHTEKNDEELKQLLQKF 842
Query: 535 LIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEA----------------EMER 578
+E+L +L KE E N + + ++ IE ++ +E
Sbjct: 843 PTEDENLNLKELEKEFNE-NNQIVDNIIKDIENMNKNINIIKTLNIAINRSNSNKQLVEH 901
Query: 579 LLLDRSDMNEQISKYEITIEAND---------------KELQRLQEQL------------ 611
LL ++ D+ ++ ++ I ++ KE +++++QL
Sbjct: 902 LLNNKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLNKEKEKIEKQLSDTKINNLKMQI 961
Query: 612 -ASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDT 670
+L +S E I + +HLE+ D +K++ EH E+ + L LNK+++D
Sbjct: 962 EKTLEYYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEI----DKLNVNYNILNKKIDDL 1017
Query: 671 EKRAQETKASLVQQ-ASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLT 729
K+ + L+ + + + ++ E+ TKL+ N+ + +
Sbjct: 1018 IKKQHDDIIELIDKLIKEKGKEIEEKVDQYISLLEKMKTKLSSFHFNIDIKKYKNPKIKE 1077
Query: 730 EEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGD 789
E K LE+K+ A +K+I E K+ + +I + + ++ A+ +
Sbjct: 1078 EIKL-----LEEKVEALLKKIDENKN---------------KLIEIKNKSHEHVVNADKE 1117
Query: 790 KQQALLIAQQDQKAIQD---RLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQ 846
K + + +K+++ ++ + LKELE + + E +R I+ + EQ
Sbjct: 1118 KNKQTEHYNKKKKSLEKIYKQMEKTLKELENMNLEDITLNEVNEIEIEYERILIDHIVEQ 1177
Query: 847 LNRTVAK----LEELKTRTEE-----EKAILER--------------KISDLKSEREALV 883
+N K +EE+++ ++ + ER K + E L
Sbjct: 1178 INNEAKKSKTIMEEIESYKKDIDQVKKNMSKERNDHLTTFEYNAYYDKATASYENIEELT 1237
Query: 884 TESEELKVQLHLSE--DKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFE 941
TE++ LK + + S D++ ++ Q+ +++ + N E+ ++ + L + E
Sbjct: 1238 TEAKGLKGEANRSTNVDELKEIKLQVFSYLQQVIKENNKMENALHEIKNMYEFLISIDSE 1297
Query: 942 K 942
K
Sbjct: 1298 K 1298
Score = 36.0 bits (83), Expect = 0.26
Identities = 130/723 (17%), Positives = 261/723 (36%), Gaps = 71/723 (9%)
Query: 389 RKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVK 448
+KE+ + ++E++ + + S E ++ ++ + + E E L++
Sbjct: 488 KKESSDSNYQEKVDELLQIINSIKEKNNIVNNNFKNIEDYYITIE----GLKNEIEGLIE 543
Query: 449 NIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDR 508
I+ L K+++ M + + + +++N + I +Q +
Sbjct: 544 LIKYYLQSIETLIKDEKLKRSMKNDIKNKIKYIEENVDHIKDIISLNDEIDNIIQQIEEL 603
Query: 509 INSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLA----- 563
IN + +E + K D+ +++ K K L++ +E+ L
Sbjct: 604 INEALFNKEKFINEKNDLQEKVKYI---------LNKFYKGDLQELLDELSHFLDDHKYL 654
Query: 564 -HIEKSKGDV-------EAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLR 615
H KSK D+ + E E+L +SD + I K KELQ L ++
Sbjct: 655 YHEAKSKEDLQTLLNTSKNEYEKLEFMKSDNIDNIIK------NLKKELQNLLSLKENII 708
Query: 616 SDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELED--TEKR 673
K+ L I D + L Q +K L+ ++E ++E L+ ++ +
Sbjct: 709 --KKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKEEEEKLEVYKHQIINRKNEFILHLY 766
Query: 674 AQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKE 733
+ + Y++ I N + + + L E K N + + + +
Sbjct: 767 ENDKDLPDGKNTYEEFLQYKDTILNKENKISNDINILKENKKNNQDLLNSYNILIQKLEA 826
Query: 734 QVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHED------------ 781
E+ K TE+++ L L+ + +D I + E+
Sbjct: 827 HTEKNDEELKQLLQKFPTEDENLNLKELEKEFNENNQIVDNIIKDIENMNKNINIIKTLN 886
Query: 782 -ALLRAEGDKQ--QALLIAQQDQKAIQDRLSQVLK-----ELEEEKCTLDRIKRESAGRS 833
A+ R+ +KQ + LL + D K ++ +++ + E+ L+ + +E
Sbjct: 887 IAINRSNSNKQLVEHLLNNKIDLKNKLEQHMKIINTDNIIQKNEKLNLLNNLNKEKEKIE 946
Query: 834 EQDRNT-INTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQ 892
+Q +T IN L+ Q+ +T+ ++ K K+ K E E +E ++L V
Sbjct: 947 KQLSDTKINNLKMQIEKTLEYYDKSKENINGNDGTHLEKLDKEKDEWEHFKSEIDKLNVN 1006
Query: 893 LHLSEDKVDTVQAQLLETARRL---------KEAENVGESLRKDLLDTKTHLADSNFEKD 943
++ K+D + + + L KE E + L KT L+ +F D
Sbjct: 1007 YNILNKKIDDLIKKQHDDIIELIDKLIKEKGKEIEEKVDQYISLLEKMKTKLSSFHFNID 1066
Query: 944 KYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIA--VRFGDDEKQALRNQLNDQSNDVA 1001
N ++E +K +E + + IDE K+ + + N Q+
Sbjct: 1067 IKKYKNPKIKEEIKLLEEKVEALLKKIDENKNKLIEIKNKSHEHVVNADKEKNKQTEHYN 1126
Query: 1002 SLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKD 1061
KK L E+I ++ L+ E I Y L VE
Sbjct: 1127 KKKKSL---EKIYKQMEKTLKELENMNLEDITLNEVNEIEIEYERILIDHIVEQINNEAK 1183
Query: 1062 RSD 1064
+S
Sbjct: 1184 KSK 1186
>gnl|CDD|227061 COG4717, COG4717, Uncharacterized conserved protein [Function
unknown].
Length = 984
Score = 38.3 bits (89), Expect = 0.049
Identities = 66/334 (19%), Positives = 125/334 (37%), Gaps = 30/334 (8%)
Query: 365 PAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTS 424
P L R P ++ V R R+ L ++ YE+ + +
Sbjct: 530 PEELARLLITDELPELAVDLLVQSRIRQHWQQLRKALDQLEAAYEALEGRFAAAEAAMAE 589
Query: 425 LTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKN 484
S+ ++ +L +I + L + K E+ V L ++
Sbjct: 590 WQSEWEEALDELGLSRELSPEQQLDILSTMKDLKKLMQKKAELTHQVARLREEQAAFEER 649
Query: 485 NSRLSKINESLQSEKLFL------------QNELDRINSD-----MDAREVELRGKEDMN 527
L + E+ + L Q E R+ + ELR + +++
Sbjct: 650 VEGLLAVLEAQFIDLSTLFCVQRLRVAAELQKEEARLALEGNIERTKELNDELRAELELH 709
Query: 528 RRLREDLL----IANED--LKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLL 581
R+ DL ED + A+ ++ L Q + +++L A +E + E+ L
Sbjct: 710 RKEILDLFDCGTADTEDAFREAAREEQQ-LTQRESRLESLEAQLEGVAAE-AYELSASLD 767
Query: 582 DRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQ 641
R E+++ E I+A D+E++ L Q+A+L LE T + L Q ++E
Sbjct: 768 QRELKEEELALLEEAIDALDEEVEELHAQVAALSRQIAQLEG--GGTVAELRQ---RRES 822
Query: 642 LEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQ 675
L+ +++E K SL+ V L + L ++R
Sbjct: 823 LKEDLEEKARKWASLRLAVQVLEEALRLFKERRL 856
Score = 34.4 bits (79), Expect = 0.69
Identities = 93/624 (14%), Positives = 209/624 (33%), Gaps = 37/624 (5%)
Query: 421 QVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREIN------EMVESL 474
Q+ L +L Q + ++ + +E K +E R E + L + + E+ +
Sbjct: 182 QINQLLEKLKQERNEIDEAEKEYATYHKLLESRRAEHARLAELRSELRADRDHIRALRDA 241
Query: 475 NSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDL 534
++Q+ ++ + F ++ + R+ + + + RL E
Sbjct: 242 VELWPRLQEWKQLEQELTRRREELATFPRDGVLRLEKREAHLQKTEAEIDALLVRLAELK 301
Query: 535 LIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYE 594
+A++ L AK A + + + + A +E L D+ + + +E
Sbjct: 302 DLASQ-LIPAKEAVLQALVRLHQQLSEIKASAFELTETLAGIEADLRDKEE--AAGNGFE 358
Query: 595 ITIEANDKELQRLQEQLASLRSDKESLEAIL----FDTQSHLEQSDVKKEQLEHEVQELL 650
+ + L+ + +S R K++ A E + +++L + +E+
Sbjct: 359 AERVHDLRSLECMLRYQSSQRELKQTEAAYCKRLDEKRLFEDEAEEEARQRLADDEEEVR 418
Query: 651 VKQESLKGQVVRLN--KELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVT 708
E+ + ++ + + E+ + +Q + + + +
Sbjct: 419 AGDEAREEKIAANSQVIDKEEVCNLYDRRDTAWQKQRFLREKQTAFERQKTEHTKIIALR 478
Query: 709 KLTEEKINLKKQNEECVTKLTEEKEQ-VRAALEKKLHATVKQITEEKDCELSRLQANLCQ 767
+ L + + ++ Q V + E K + + + ++ A L
Sbjct: 479 LAGMLLVALSRLLTSLIFQIIFAVAQIVFLSAEIKSSSRAVREEKAAVTDIPEELARLLI 538
Query: 768 LQSHIDKICQQHEDALLRAEGDKQ-QALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIK 826
+ + +R + +AL + +A++ R + + E + +
Sbjct: 539 TDELPELAVDLLVQSRIRQHWQQLRKALDQLEAAYEALEGRFAAAEAAMAEWQSEWEEAL 598
Query: 827 RESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTES 886
E E EQ ++ +++LK + ++KA L +++ L+ E+ A
Sbjct: 599 DELGLSRELS-------PEQQLDILSTMKDLK-KLMQKKAELTHQVARLREEQAAFEERV 650
Query: 887 EELKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNF----EK 942
E L L + T L R AE E R L + N E
Sbjct: 651 EGLLAVLEAQFIDLST----LFCVQRLRVAAELQKEEARLALEGNIERTKELNDELRAEL 706
Query: 943 DKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLND----QSN 998
+ + K DL + + +A ++ L + R E Q S
Sbjct: 707 ELHRKEILDLFDCGTADTEDAFREAAREEQQLTQRESRLESLEAQLEGVAAEAYELSASL 766
Query: 999 DVASLKKELLQAEQIRLDLDSEKV 1022
D LK+E L + +D E+V
Sbjct: 767 DQRELKEEELALLEEAIDALDEEV 790
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional.
Length = 520
Score = 37.5 bits (88), Expect = 0.067
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 573 EAEME-RLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSH 631
EAE E + +L+ + + K E +EA ++ + E LR + L+ +
Sbjct: 35 EAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQK 94
Query: 632 LEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDAD 691
E D K E LE +EL K++ L+ + L K+ E+ E+ +E L ++ SGL A+
Sbjct: 95 EENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL-ERISGLTAE 153
Query: 692 YQNQISNLKKQNEECVTKLTEEKINLKKQNEE 723
+I L ++ EE + E L K+ EE
Sbjct: 154 EAKEI--LLEKVEE---EARHEAAVLIKEIEE 180
Score = 35.9 bits (84), Expect = 0.23
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 780 EDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKE-----------LEEEKCTLDRIKRE 828
E+A AE K++ALL A+++ +++ + L+E L +++ LDR K E
Sbjct: 45 EEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDR-KLE 103
Query: 829 SAGRSEQDRNTINTLREQLNRTVAKLE-ELKTRTEEEKAILERKISDLKSE--REALVTE 885
+ E++ EQ + + K E EL+ EE+ LER IS L +E +E L+ +
Sbjct: 104 LLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELER-ISGLTAEEAKEILLEK 162
Query: 886 SEE 888
EE
Sbjct: 163 VEE 165
Score = 35.5 bits (83), Expect = 0.26
Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 29/154 (18%)
Query: 537 ANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEIT 596
A ++ + K KE L + KEE+ L EK + E+++L E + +
Sbjct: 47 AKKEAEAIK--KEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDR---K 101
Query: 597 IEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESL 656
+E +K + L+++ L ++ LE K+E+LE ++E L + E +
Sbjct: 102 LELLEKREEELEKKEKELEQKQQELEK--------------KEEELEELIEEQLQELERI 147
Query: 657 KGQVVRLNKE------LEDTEKRAQETKASLVQQ 684
G L E LE E+ A+ A L+++
Sbjct: 148 SG----LTAEEAKEILLEKVEEEARHEAAVLIKE 177
Score = 33.2 bits (77), Expect = 1.2
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 48/193 (24%)
Query: 699 LKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCEL 758
+K+ EE L E K + +E + + EE ++R EK+L E+ EL
Sbjct: 33 IKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKEL--------RERRNEL 84
Query: 759 SRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQ-KAIQDRLSQVLKELEE 817
+L+ L Q E+ L D++ LL ++++ + + L Q +ELE+
Sbjct: 85 QKLEKRL-----------LQKEENL-----DRKLELLEKREEELEKKEKELEQKQQELEK 128
Query: 818 EKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEE--KAILERKISDL 875
++ L+ + E + +LE + T EE + +LE+ +
Sbjct: 129 KEEELEELIEE---------------------QLQELERISGLTAEEAKEILLEKVEEEA 167
Query: 876 KSEREALVTESEE 888
+ E L+ E EE
Sbjct: 168 RHEAAVLIKEIEE 180
Score = 32.1 bits (74), Expect = 3.6
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 1490 ELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRR 1549
E R E+Q L++ L+ N E L++ ++ L E E Q+ L+ + L EL
Sbjct: 79 ERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIE 138
Query: 1550 QQVNRLEN-----QDDLKAM-TQALKREIKDLSDAHTQESNKMAQAQQTMRA 1595
+Q+ LE ++ K + + ++ E + + +E + A+ + +A
Sbjct: 139 EQLQELERISGLTAEEAKEILLEKVEEEARHEAAVLIKEIEEEAKEEADKKA 190
Score = 31.3 bits (72), Expect = 4.8
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 267 ATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERV---EELL-KRIHTLEARVE 322
A +K+ L++ E+ + E NE ++ E+R+ EE L +++ LE R E
Sbjct: 51 AEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREE 110
Query: 323 EADQNVLLVEEMQQELELLQNTLRDI 348
E ++ +E+ QQELE + L ++
Sbjct: 111 ELEKKEKELEQKQQELEKKEEELEEL 136
Score = 31.3 bits (72), Expect = 5.4
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 272 KDKLVKENSELKSQVTVLKSENNAMANESKQKEERV----EELLKRIHTLEARVEEADQN 327
K+++ K +E + ++ ++E + QKEE + E L KR LE + +E +Q
Sbjct: 63 KEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQK 122
Query: 328 VLLVEEMQQELELLQNTLRDI 348
+E+ ++ELE L
Sbjct: 123 QQELEKKEEELEELIEEQLQE 143
>gnl|CDD|235503 PRK05561, PRK05561, DNA topoisomerase IV subunit A; Validated.
Length = 742
Score = 37.4 bits (88), Expect = 0.072
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Query: 1654 TKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLYIYRDTRAGKEMQQLRQALGDSL 1713
KL E E+R + + L +I L L SE K R+L KE++ + GD
Sbjct: 435 AKL--EEIEIRKEQDELRKEIAELEAILASERKLRKLIK-------KELKADAKKFGDPR 485
Query: 1714 RTVAHDPAVDALLLEHE 1730
RT + + E
Sbjct: 486 RTPIEEAEEAIAIDEEA 502
>gnl|CDD|234173 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of
this protein family are the bacterial ATP-dependent
chaperone ClpB. This protein belongs to the AAA family,
ATPases associated with various cellular activities
(pfam00004). This molecular chaperone does not act as a
protease, but rather serves to disaggregate misfolded and
aggregated proteins [Protein fate, Protein folding and
stabilization].
Length = 852
Score = 37.6 bits (88), Expect = 0.075
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 1395 ESGARLDAEKRALQDELSRTEARVTKLELQRVAL-----EGDQQRLQMLLQEKE-TNLHK 1448
E+ AR+ E + +EL + R+ +LE++R AL E ++RL+ L EKE L +
Sbjct: 391 EAAARIRMEIDSKPEELDELDRRIIQLEIEREALKKEKDEASKERLEDL--EKELAELEE 448
Query: 1449 LQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERAS-AGETELRGEIQTLQRNLMDTSL 1507
E Q + + +K I+Q+ L LE+A G+ E+Q
Sbjct: 449 EYADLEEQWKAEKAAIQGIQQIKEEIEQVRLELEQAEREGDLAKAAELQY---------- 498
Query: 1508 NSQSNCEKLKQLQKLLHSAENE 1529
KL +L+K L +AE +
Sbjct: 499 ------GKLPELEKRLQAAEAK 514
Score = 33.8 bits (78), Expect = 1.1
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 598 EANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQEL-------- 649
EA+ + L+ L+++LA L + LE ++ ++ KE++E EL
Sbjct: 430 EASKERLEDLEKELAELEEEYADLEEQWKAEKAAIQGIQQIKEEIEQVRLELEQAEREGD 489
Query: 650 LVKQESLK-GQVVRLNKELEDTEKR-AQETKASLVQQ 684
L K L+ G++ L K L+ E + +ETK L+++
Sbjct: 490 LAKAAELQYGKLPELEKRLQAAEAKLGEETKPRLLRE 526
>gnl|CDD|227608 COG5283, COG5283, Phage-related tail protein [Function unknown].
Length = 1213
Score = 37.6 bits (87), Expect = 0.078
Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 17/177 (9%)
Query: 542 KNAKLAKELLEQNKEEMQTLLAHIEKSKG---DVEAEMERLLLDRSDMNEQISKYEITIE 598
K KL K+ L +K + + L +EK K D++ E++ + + +Y
Sbjct: 43 KQQKLTKDGLSASKGKYEGLSEAMEKQKKAYEDLKQEVKEVNRATQASKKAYQEYNAQYT 102
Query: 599 ANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKK-------EQLEHEVQELLV 651
+ +L+ L Q + + Q + + EQ ++
Sbjct: 103 QAENKLRSLSGQFGVASEQLMLQQKEIQRLQYAISTLNKSMAAQARLLEQTGNKFGTADA 162
Query: 652 KQESLKGQVVR----LNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNE 704
K L+ R LNK+LE T+K A L + L Q + L++ E
Sbjct: 163 KVVGLRESFGRQTEALNKQLERTKKVADALTYVLDEAQQKLS---QALSARLERLQE 216
Score = 35.3 bits (81), Expect = 0.34
Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 11/210 (5%)
Query: 1223 KSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLM 1282
KS + + L+ + +++ +Y + E +K +L
Sbjct: 28 KSSIKDSTQFWKMLEKQQKLTKDGLSASKGKYEGLSEAM----------EKQKKAYEDLK 77
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
Q+V ++ R K Q + + S + A + + Q+E L+ +S
Sbjct: 78 QEVKEVNRATQASKKAYQEYNAQYTQAENKLRSLSGQFGVASEQLMLQQKEIQRLQYAIS 137
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKS-QGDDKLMKCRESGARLD 1401
+ +Q+ ++Q + KV+ L + +E + Q + LD
Sbjct: 138 TLNKSMAAQARLLEQTGNKFGTADAKVVGLRESFGRQTEALNKQLERTKKVADALTYVLD 197
Query: 1402 AEKRALQDELSRTEARVTKLELQRVALEGD 1431
++ L LS R+ + Q G
Sbjct: 198 EAQQKLSQALSARLERLQESRTQMSQSSGQ 227
>gnl|CDD|130902 TIGR01843, type_I_hlyD, type I secretion membrane fusion protein,
HlyD family. Type I secretion is an ABC transport
process that exports proteins, without cleavage of any
signal sequence, from the cytosol to extracellular medium
across both inner and outer membranes. The secretion
signal is found in the C-terminus of the transported
protein. This model represents the adaptor protein
between the ATP-binding cassette (ABC) protein of the
inner membrane and the outer membrane protein, and is
called the membrane fusion protein. This model selects a
subfamily closely related to HlyD; it is defined narrowly
and excludes, for example, colicin V secretion protein
CvaA and multidrug efflux proteins [Protein fate, Protein
and peptide secretion and trafficking].
Length = 423
Score = 36.9 bits (86), Expect = 0.085
Identities = 27/173 (15%), Positives = 65/173 (37%), Gaps = 11/173 (6%)
Query: 842 TLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVD 901
+ + L +++ + S +S + L + E + Q+ E ++
Sbjct: 102 AEADSQAAIEFPDDLLSAEDPAVPELIKGQQSLFESRKSTLRAQLELILAQIKQLEAELA 161
Query: 902 TVQAQL---LETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKK 958
+QAQL + + E L++ L ++ L + + + A++ +L + +
Sbjct: 162 GLQAQLQALRQQLEVISEELEARRKLKEKGLVSRLELLEL---ERERAEAQGELGRLEAE 218
Query: 959 VESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAE 1011
+E KR E Q ++ + +L + +A L++ L +A
Sbjct: 219 LEVLKRQIDELQLERQQIEQTF-----REEVLEELTEAQARLAELRERLNKAR 266
Score = 35.8 bits (83), Expect = 0.20
Identities = 41/201 (20%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 428 QLDQT--KAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNN 485
+LD T +A A++ + L + LR E + + E + L S D
Sbjct: 73 ELDATDVEADAAELESQVLRLEAEVARLRAEA-----DSQAAIEFPDDLLSAEDPAVPE- 126
Query: 486 SRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAK 545
+ +S K L+ +L+ I + + E EL G + + LR+ L + +E+L +
Sbjct: 127 -LIKGQQSLFESRKSTLRAQLELILAQIKQLEAELAGLQAQLQALRQQLEVISEEL---E 182
Query: 546 LAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITI-EANDKEL 604
++L E+ LL +E+ + + + E+ RL + + QI + ++ +
Sbjct: 183 ARRKLKEKGLVSRLELLE-LERERAEAQGELGRLEAELEVLKRQIDELQLERQQIEQTFR 241
Query: 605 QRLQEQLASLRSDKESLEAIL 625
+ + E+L ++ L L
Sbjct: 242 EEVLEELTEAQARLAELRERL 262
Score = 35.8 bits (83), Expect = 0.21
Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 10/153 (6%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
Q + E + L+A + + +IK L ++ +Q + + EE A KL
Sbjct: 130 GQQSLFESRKSTLRAQLELILAQIKQLEAELAGLQAQLQALRQQLEVISEELEARR-KLK 188
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDA 1402
+ S+ E ++ + E + E + LE + + K Q D+ ++ ++
Sbjct: 189 EKGLV--SRLELLELERERAEAQGE-LGRLE---AELEVLKRQIDELQLERQQIEQTF-- 240
Query: 1403 EKRALQDELSRTEARVTKLELQRVALEGDQQRL 1435
+ + +EL+ +AR+ +L + QRL
Sbjct: 241 -REEVLEELTEAQARLAELRERLNKARDRLQRL 272
Score = 33.1 bits (76), Expect = 1.7
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 26/237 (10%)
Query: 1256 PVRGGE---GGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDA 1312
VR G+ G+ L+++D V L QV ++E E L+A + I+ D
Sbjct: 58 LVREGDRVKAGQVLVELDATDVEADAAELESQVLRLEAEVARLRAEADSQAA-IEFPDDL 116
Query: 1313 HTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTL 1372
+ E + + + ++L E + ++ L +Q + Q EL L+ ++ L
Sbjct: 117 LSAEDPAVPELIKGQQSLFESR---KSTLRAQLELILAQ---IKQLEAELAGLQAQLQAL 170
Query: 1373 ELTLSNVSEEKSQGDDKLMKCRESGARLD-----AEKRALQDELSRTEARVTKLELQRVA 1427
V E+ + KL + + +RL+ E+ Q EL R EA + L+ Q
Sbjct: 171 R-QQLEVISEELEARRKLKE-KGLVSRLELLELERERAEAQGELGRLEAELEVLKRQ--- 225
Query: 1428 LEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERA 1484
++ Q Q + Q + L+E E Q R + L ER + D+L + R+
Sbjct: 226 IDELQLERQQIEQTFREEV--LEELTEAQAR-LAELRERLNKAR---DRLQRLIIRS 276
Score = 30.7 bits (70), Expect = 8.0
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 731 EKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDA-----LLR 785
+ E A L+ +L A +Q+ + +R + L S ++ + + E A L R
Sbjct: 155 QLEAELAGLQAQLQALRQQLEVISEELEARRKLKEKGLVSRLELLELERERAEAQGELGR 214
Query: 786 AEGD----KQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTIN 841
E + K+Q + + Q+ Q +VL+EL E + L ++ +DR
Sbjct: 215 LEAELEVLKRQIDELQLERQQIEQTFREEVLEELTEAQARLAELRERL--NKARDRLQRL 272
Query: 842 TLREQLNRTV 851
+R ++ TV
Sbjct: 273 IIRSPVDGTV 282
>gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R;
Provisional.
Length = 1123
Score = 37.2 bits (87), Expect = 0.088
Identities = 20/89 (22%), Positives = 42/89 (47%)
Query: 598 EANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLK 657
E + L LQ+++ +L+ E +Q+ E + LE EL KQ+ L+
Sbjct: 138 EDPENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELE 197
Query: 658 GQVVRLNKELEDTEKRAQETKASLVQQAS 686
Q+ +L ++ +T + ++ + + QA+
Sbjct: 198 AQLEQLQEKAAETSQERKQKRKEITDQAA 226
>gnl|CDD|223571 COG0497, RecN, ATPase involved in DNA repair [DNA replication,
recombination, and repair].
Length = 557
Score = 36.8 bits (86), Expect = 0.100
Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 26/229 (11%)
Query: 420 QQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLD 479
+ Q + +L + ++ + ++L+ + LE+ + E E L+
Sbjct: 157 EAYQEAYQAWKQARRELEDLQEKERERAQRADLLQFQLEELEELNLQPGEDEE-----LE 211
Query: 480 KVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANE 539
+ +K S K+ E++Q+ L E D +++ + R L ++
Sbjct: 212 EERKRLSNSEKLAEAIQNALELLSGEDDTVSAL-----------SLLGRALEALEDLSEY 260
Query: 540 DLKNAKLAKEL------LEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKY 593
D K ++LA+ L LE+ EE++ L +E +E ERL + KY
Sbjct: 261 DGKLSELAELLEEALYELEEASEELRAYLDELEFDPNRLEEVEERL----FALKSLARKY 316
Query: 594 EITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQL 642
+TIE + L +++E+LA L + +ESLEA+ + + + E L
Sbjct: 317 GVTIEDLLEYLDKIKEELAQLDNSEESLEALEKEVKKLKAELLEAAEAL 365
Score = 33.3 bits (77), Expect = 1.2
Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 30/202 (14%)
Query: 730 EEKEQVRAALEKKLHATVKQITEE--KDCELSRLQANLCQLQSHIDKICQQHEDAL--LR 785
+EKE+ RA L ++++ E + E L+ + S+ +K+ + ++AL L
Sbjct: 177 QEKERERAQRADLLQFQLEELEELNLQPGEDEELEEER-KRLSNSEKLAEAIQNALELLS 235
Query: 786 AEGDKQQALLIAQQDQKAIQD------RLSQVLKELEEEKCTLDRIKRESAGRSEQDRNT 839
E D AL + + +A++D +LS++ + LEE L+ E
Sbjct: 236 GEDDTVSALSLLGRALEALEDLSEYDGKLSELAELLEEALYELEEASEE----------- 284
Query: 840 INTLREQLNRTVAKLEELKTRTEEEKAILERK----ISDLKSEREALVTESEELKVQ--- 892
+ ++L +LEE++ R K+ L RK I DL + + E +L
Sbjct: 285 LRAYLDELEFDPNRLEEVEERLFALKS-LARKYGVTIEDLLEYLDKIKEELAQLDNSEES 343
Query: 893 LHLSEDKVDTVQAQLLETARRL 914
L E +V ++A+LLE A L
Sbjct: 344 LEALEKEVKKLKAELLEAAEAL 365
Score = 31.0 bits (71), Expect = 7.6
Identities = 49/279 (17%), Positives = 98/279 (35%), Gaps = 54/279 (19%)
Query: 297 ANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDA 356
A + +E +E + +E+ + E Q +LLQ L ++ +Q
Sbjct: 149 AGLEELAQEAYQEAYQAWKQARRELEDLQEKE---RERAQRADLLQFQLEELEELNLQPG 205
Query: 357 EGKDIPSRPAPLKRHATFSARPSTSIKPSVTFRKETKLATHREQLHTMKKQYESADESQY 416
E + +L R++L +K E+ +
Sbjct: 206 E---------------------------------DEELEEERKRLSNSEKLAEAIQNALE 232
Query: 417 NMSQ--QVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESL 474
+S S S L + L + L + E+L LE+ E+ ++ L
Sbjct: 233 LLSGEDDTVSALSLLGRALEALEDLSEYDGKLSELAELLEEALYELEEASEELRAYLDEL 292
Query: 475 NSNLDKVQKNNSRLSKIN----------ESLQSEKLFLQNELDRINSDMDAREVELRGKE 524
+ +++++ RL + E L ++ EL +++ + + L +
Sbjct: 293 EFDPNRLEEVEERLFALKSLARKYGVTIEDLLEYLDKIKEELAQLD-NSEESLEALEKEV 351
Query: 525 DMNRRLREDLLIANEDLKNA--KLAKELLEQNKEEMQTL 561
+L+ +LL A E L K AKEL ++ E++ L
Sbjct: 352 K---KLKAELLEAAEALSAIRKKAAKELEKEVTAELKAL 387
>gnl|CDD|182791 PRK10865, PRK10865, protein disaggregation chaperone; Provisional.
Length = 857
Score = 36.7 bits (85), Expect = 0.12
Identities = 47/206 (22%), Positives = 104/206 (50%), Gaps = 31/206 (15%)
Query: 1395 ESGARLDAEKRALQDELSRTEARVTKLELQRVAL-----EGDQQRLQML---LQEKETNL 1446
E+ + + + + +EL R + R+ +L+L++ AL E ++RL ML L +KE
Sbjct: 396 EAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQY 455
Query: 1447 HKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERAS-----AGETELR-GEIQTLQR 1500
+L+E + + +++G + ++K ++Q + +E+A A +EL+ G+I L++
Sbjct: 456 SELEEEWKAEKASLSGTQ----TIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEK 511
Query: 1501 NLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQ-- 1558
L + +Q + ++ L+ + AE + VL + + E R+++ R+E +
Sbjct: 512 QL---AAATQLEGKTMRLLRNKVTDAEIAE-VLARWTGIPVSRMLESEREKLLRMEQELH 567
Query: 1559 -------DDLKAMTQALKREIKDLSD 1577
+ ++A++ A++R LSD
Sbjct: 568 HRVIGQNEAVEAVSNAIRRSRAGLSD 593
>gnl|CDD|217902 pfam04111, APG6, Autophagy protein Apg6. In yeast, 15 Apg proteins
coordinate the formation of autophagosomes. Autophagy is
a bulk degradation process induced by starvation in
eukaryotic cells. Apg6/Vps30p has two distinct functions
in the autophagic process, either associated with the
membrane or in a retrieval step of the carboxypeptidase
Y sorting pathway.
Length = 356
Score = 36.0 bits (83), Expect = 0.16
Identities = 23/84 (27%), Positives = 36/84 (42%)
Query: 588 EQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQ 647
E + EA D EL L+++ L + E LE D L + +KEQLE+E
Sbjct: 56 ESQNVEISNYEALDSELDELKKEEERLLDELEELEKEDDDLDGELVELQEEKEQLENEEL 115
Query: 648 ELLVKQESLKGQVVRLNKELEDTE 671
+ L + ++L L+ E
Sbjct: 116 QYLREYNLFDRNNLQLEDNLQSLE 139
Score = 33.7 bits (77), Expect = 0.82
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 404 MKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKN 463
KQY S ESQ +L S+LD+ K + ++ E E L K + L E L++
Sbjct: 47 TYKQYLSKLESQNVEISNYEALDSELDELKKEEERLLDELEELEKEDDDLDGELVELQEE 106
Query: 464 KREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRI 509
K ++ + +NN +L +SL+ + + N+LD++
Sbjct: 107 KEQLENEELQYLREYNLFDRNNLQLEDNLQSLELQYEYSLNQLDKL 152
Score = 32.9 bits (75), Expect = 1.5
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 17/143 (11%)
Query: 524 EDMNRRLREDLLIANEDLKNAKLAKELLE-QNKEEMQTLLAHIEKSKGDVEAEMERLLLD 582
+ + RL +L A ++ K LE QN E ++ +++ E ERLL
Sbjct: 28 DILLERLDSELRDAEKERDTYKQYLSKLESQNVEISNY--EALDSELDELKKEEERLL-- 83
Query: 583 RSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQL 642
+++ + E KE L +L L+ +KE LE D QL
Sbjct: 84 -----DELEELE-------KEDDDLDGELVELQEEKEQLENEELQYLREYNLFDRNNLQL 131
Query: 643 EHEVQELLVKQESLKGQVVRLNK 665
E +Q L ++ E Q+ +L K
Sbjct: 132 EDNLQSLELQYEYSLNQLDKLRK 154
>gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC. All proteins in this family for
which functions are known are part of an exonuclease
complex with sbcD homologs. This complex is involved in
the initiation of recombination to regulate the levels of
palindromic sequences in DNA. This family is based on the
phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis,
Stanford University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 1042
Score = 36.1 bits (83), Expect = 0.19
Identities = 86/554 (15%), Positives = 179/554 (32%), Gaps = 51/554 (9%)
Query: 569 KGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDT 628
G E R L Y + +KEL+ L+E L + L
Sbjct: 193 HGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYL------- 245
Query: 629 QSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQA-SG 687
+ ++ ++ + + +++L + E L+ Q L + E + + + +A +
Sbjct: 246 -TQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQ 304
Query: 688 LDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATV 747
++ Q + L+ + L + ++K+Q+ + + + + H
Sbjct: 305 IEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVA 364
Query: 748 KQITEEKDCELSRLQANLCQLQSHIDKICQQHE----------------DALLRAEGDKQ 791
I E + + Q ++ LQ + Q+ + D A D Q
Sbjct: 365 TSIREISCQQHTLTQ-HIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQ 423
Query: 792 QALLIAQQDQKAIQDRLSQ-------VLKELEEEKCTLDRIKRESAGRSEQDRNTINTLR 844
L A++ Q+ Q + + EK L + R +Q + +
Sbjct: 424 GQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQT-KEQIH 482
Query: 845 EQLNRTVAKLEELKTRTEEEKAILERKISDLKSER------EALVTESEELKVQLHLSED 898
Q R A + +EE L R L + + E
Sbjct: 483 LQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLET 542
Query: 899 KVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKK 958
+ V QL ++ + + +++ S + L+++ +K
Sbjct: 543 SEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEK 602
Query: 959 VESEKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKELLQAEQIRLDLD 1018
+ + A L+K+ +Q L++ L +L ++L L
Sbjct: 603 LSEAEDMLACEQHALLRKL------QPEQDLQDVRLHLQQCSQELALKLTALHALQLTLT 656
Query: 1019 SEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKKEN 1078
E+V L I + S L L +++ E Q+T + L+ +LL R+ E
Sbjct: 657 QERVRE----HALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLL-RELET 711
Query: 1079 VVEDLARLKQKYEQ 1092
+E+ R + E
Sbjct: 712 HIEEYDREFNEIEN 725
Score = 34.9 bits (80), Expect = 0.49
Identities = 51/416 (12%), Positives = 131/416 (31%), Gaps = 26/416 (6%)
Query: 1276 KGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKY 1335
G L+ +Q+ M + L + Q QQ+ L +++
Sbjct: 193 HGKAELLTLRSQLLT--LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKRE 250
Query: 1336 ALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRE 1395
A E +L + + ++ + + +E + + + + + + + +
Sbjct: 251 AQEEQLKKQQLLKQLRARIEELRAQEAVL---EETQERINRARKAAPLAAHIKAVTQIEQ 307
Query: 1396 SGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEH 1455
R+ E ++ ++ + Q+ ++E ++ LQ L ++
Sbjct: 308 QAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHI-----RDAHE 362
Query: 1456 QCRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEK 1515
+I + + +L I L + L E+ LQR + +
Sbjct: 363 VATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAF--- 419
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDL 1575
+ LQ L A+ ++ + Q + C A++ + + + + + +++++
Sbjct: 420 -RDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTK 478
Query: 1576 SDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQLR 1635
H QE+ K A + LQEE L A + E
Sbjct: 479 EQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYA 538
Query: 1636 MSQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLY 1691
+ + + + R + +L +++Q ++ + +
Sbjct: 539 QLE------------TSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRS 582
Score = 31.5 bits (71), Expect = 5.1
Identities = 92/703 (13%), Positives = 207/703 (29%), Gaps = 55/703 (7%)
Query: 26 TSHGVDSSHLLRQNSDLQRKLDEESVINRKKLEAYRTSQQQQAALVSKLQAKLLQYKQRC 85
T D+ H +Q + + K E++ ++ AY T +++ K Q L Q + R
Sbjct: 210 TPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARI 269
Query: 86 KELELEREAPSTSSYLGPLPSTPLPSALDAAQ-AHLREMREERIQDLNTALRRLDDERRE 144
+EL + + P A + + + +L + +R +
Sbjct: 270 EELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMK 329
Query: 145 NEKLRKMNSVYKEQLDEAHHTNEALTNDLEKLTTDWTHLREEMAMKEKDWIEEEQYFNDY 204
K S +EQ +L + D E +
Sbjct: 330 RAAHVKQQSSIEEQ---------------RRLLQTLHSQEIHIR----DAHEVATSIREI 370
Query: 205 YSSEHARLLALWRDVVDIKRSFTAMQSATEQDLSKIRSDLNQSTRQMSGACNGLVALSAG 264
+H + + K + T + ++L ++ + + S + L+
Sbjct: 371 SCQQHTLTQHI-HTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHA 429
Query: 265 SSATNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEA 324
++ + + K E ES Q + E+ L+ + +
Sbjct: 430 KKQQELQQRYAELCAAAITCTAQCEKLE-KIHLQESAQSLKEREQQLQTKEQIHLQETRK 488
Query: 325 DQNVLLVEEMQQELE--LLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSARPSTSI 382
VL QE L + + D G + +A
Sbjct: 489 KAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDV- 547
Query: 383 KPSVTFRKETKLATHREQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGRE 442
+L + R+Q ++K+Q + +S ++Q + + ++
Sbjct: 548 --------YHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDL 599
Query: 443 KEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFL 502
E L E + + ++ + Q L + ++ L + L
Sbjct: 600 TEKL------SEAEDMLACEQHALLRKLQPEQDL-----QDVRLHLQQCSQELALKLTAL 648
Query: 503 QNELDRINSDMDAREVELRGKEDMNRRL--REDLLIANEDLKNAKLA-KELLEQNKEEMQ 559
+ + RE L + L R+ L + K KE+L Q + ++
Sbjct: 649 HALQLTLTQE-RVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLR 707
Query: 560 TLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKE 619
L HIE+ + + S +A ++ L+ L Q ++ +
Sbjct: 708 ELETHIEEYDREFNEIENAS-------SSLGSDLAAREDALNQSLKELMHQARTVLKART 760
Query: 620 SLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKA 679
+ + Q+ + L E+Q +E + L E+ ++
Sbjct: 761 EAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILN 820
Query: 680 SLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNE 722
+ + + +++ E +L + + K+ +
Sbjct: 821 LQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQ 863
Score = 30.7 bits (69), Expect = 8.5
Identities = 106/725 (14%), Positives = 229/725 (31%), Gaps = 51/725 (7%)
Query: 993 LNDQSNDVASLKKELLQAEQIRLDLDSEKVTLQEKCKFLEIEKEKYNFVISYLLCLFQVE 1052
L +S + L L +Q E + E+ + + C+
Sbjct: 158 LKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTY 217
Query: 1053 VELSQVTKDRSDLSHQLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECE 1112
E QV + +L H LQ+ +++ A L QK E + E + + L+ L E
Sbjct: 218 HERKQVLEK--ELKHLREALQQTQQS----HAYLTQKRE-AQEEQLKKQQLLKQLRARIE 270
Query: 1113 EKEVVLLDLCARLGGAEERVRAS------SAHLLQLEASKKDVEHKLSSIGSTLRRIAAL 1166
E A L +ER+ + +AH+ + ++ + + + S +R A L
Sbjct: 271 ELRAQE----AVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKL 326
Query: 1167 RYHAFYTLSEKEAELARIRAQYDAYKSMDCHTDRSSDLERYRAAQLHAESLLEAREKSHR 1226
++++ + R S + H + ++ + L + +
Sbjct: 327 LMK-RAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQ 385
Query: 1227 QQVNRLENQLDGRAS------HAGGKMTSPSRRYSPVRG----GEGGEGLIDVDPEIVRK 1276
QQ L +L + + + + ++G + + L E+
Sbjct: 386 QQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAA 445
Query: 1277 GVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYA 1336
+ Q + + + +++++ H QE+ K A + LQEE
Sbjct: 446 AITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCP 505
Query: 1337 LETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRES 1396
L A Q + L ++ E T + + + +L R+
Sbjct: 506 LCGSCIHPNPAR--------QDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQ 557
Query: 1397 GARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQ 1456
A L + + +Q S + + L+ RLQ L ++ + CE
Sbjct: 558 RASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSE--AEDMLACEQH 615
Query: 1457 CRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNS-QSNCEK 1515
+ L+ + + E A ++ Q + + +L+ E
Sbjct: 616 -ALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKEL 674
Query: 1516 LKQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDL 1575
L Q L ++EK L + LR + + E + + A DL
Sbjct: 675 LASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDL 734
Query: 1576 S---DAHTQESNKMAQAQQTMRALQEEKYA-------LETKLSQTKAAANSQNELEVKEV 1625
+ DA Q ++ +T+ + E + + + ++ + +
Sbjct: 735 AAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLR 794
Query: 1626 ARAGLESQLRMSQWPSESPMNGGDSE-EITKLCRERSELRNKLENLHDKIQMLRDQLNSE 1684
+ ++ E P + + L +E + ++LE + + QL
Sbjct: 795 EEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKY 854
Query: 1685 IKRRQ 1689
+ +
Sbjct: 855 EECSK 859
>gnl|CDD|181619 PRK09039, PRK09039, hypothetical protein; Validated.
Length = 343
Score = 35.7 bits (83), Expect = 0.19
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 596 TIEANDKELQRLQEQLASL-------RSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQE 648
I D L RL Q+A L R + L+ + + ++ L ++ ++ +L+ + E
Sbjct: 47 EISGKDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAE 106
Query: 649 LLVKQESLKGQVVRLNKEL---EDTEKRAQETKASLVQQASGL 688
L + +G+ L +EL + RA L QQ + L
Sbjct: 107 LAGAGAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAAL 149
Score = 31.5 bits (72), Expect = 3.9
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 22/122 (18%)
Query: 550 LLEQNKEEMQTLLAHIEKSKGDVEAEMERL--LLDR------------SDMNEQISKYEI 595
L Q +++Q +A++ S EAE RL LL ++ +++ +
Sbjct: 71 LERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEGRAGELAQELDSEKQ 130
Query: 596 TIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQ--------LEHEVQ 647
+++ L +Q+A+LR +LEA L ++ +S K L VQ
Sbjct: 131 VSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVALAQRVQ 190
Query: 648 EL 649
EL
Sbjct: 191 EL 192
>gnl|CDD|234342 TIGR03752, conj_TIGR03752, integrating conjugative element protein,
PFL_4705 family. Members of this protein family are
found occasionally on plasmids such as the Pseudomonas
putida toluene catabolic TOL plasmid pWWO_p085. Usually,
however, they are found on the bacterial main chromosome
in regions flanked by markers of conjugative transfer
and/or transposition [Mobile and extrachromosomal
element functions, Plasmid functions].
Length = 472
Score = 35.8 bits (83), Expect = 0.21
Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 275 LVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQNVLLVEEM 334
LV E EL+ ++ L SEN A+ E+ E L KR +++ ++++A Q+ +E+
Sbjct: 64 LVAEVKELRKRLAKLISENEALKAEN-------ERLQKREQSIDQQIQQAVQSE--TQEL 114
Query: 335 QQELELLQNTLRDIARAVIQDAEGK 359
+E+E L++ R + +I + +
Sbjct: 115 TKEIEQLKSE-RQQLQGLIDQLQRR 138
Score = 33.1 bits (76), Expect = 1.7
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 551 LEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQ 610
+++ ++ + L++ E K AE ERL +++QI + A E Q L ++
Sbjct: 68 VKELRKRLAKLISENEALK----AENERLQKREQSIDQQIQQ------AVQSETQELTKE 117
Query: 611 LASLRSDKESLEAILFDTQSHLEQS 635
+ L+S+++ L+ ++ Q L
Sbjct: 118 IEQLKSERQQLQGLIDQLQRRLAGV 142
Score = 32.7 bits (75), Expect = 2.0
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 93 EAPSTSSYLGPLPSTPLP-SALDAAQ-----------AHLREMREERIQDLNTALRRLDD 140
+P +S +P AL A ++E+R + L + +
Sbjct: 29 GSPEPTSDTALAELSPEELKALGIEGDTPADTLRTLVAEVKELR----KRLAKLISENEA 84
Query: 141 ERRENEKLRKMNSVYKEQLDEA-HHTNEALTNDLEKLTTD 179
+ ENE+L+K +Q+ +A + LT ++E+L ++
Sbjct: 85 LKAENERLQKREQSIDQQIQQAVQSETQELTKEIEQLKSE 124
Score = 30.4 bits (69), Expect = 9.5
Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 1534 QERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLS-------DAHTQESNKM 1586
+ L T A + ELR++ + + LKA + L++ + + + TQE K
Sbjct: 58 ADTLRTLVAEVKELRKRLAKLISENEALKAENERLQKREQSIDQQIQQAVQSETQELTKE 117
Query: 1587 -AQAQQTMRALQEEKYALETKLSQTKAAANSQNE 1619
Q + + LQ L+ +L+ +
Sbjct: 118 IEQLKSERQQLQGLIDQLQRRLAGVLTGPSGGGS 151
>gnl|CDD|233830 TIGR02350, prok_dnaK, chaperone protein DnaK. Members of this
family are the chaperone DnaK, of the DnaK-DnaJ-GrpE
chaperone system. All members of the seed alignment were
taken from completely sequenced bacterial or archaeal
genomes and (except for Mycoplasma sequence) found
clustered with other genes of this systems. This model
excludes DnaK homologs that are not DnaK itself, such as
the heat shock cognate protein HscA (TIGR01991).
However, it is not designed to distinguish among DnaK
paralogs in eukaryotes. Note that a number of dnaK genes
have shadow ORFs in the same reverse (relative to dnaK)
reading frame, a few of which have been assigned
glutamate dehydrogenase activity. The significance of
this observation is unclear; lengths of such shadow ORFs
are highly variable as if the presumptive protein
product is not conserved [Protein fate, Protein folding
and stabilization].
Length = 595
Score = 35.7 bits (83), Expect = 0.27
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 269 NAEKDKLVKENSELKSQVTVLKSENNAMANESKQK--EERVEELLKRIHTLEARVEEADQ 326
NAE+DK KE E ++ L + E+ K E E++ K + L+ ++ D
Sbjct: 513 NAEEDKKRKEEIEARNNADSLAYQAEKTLKEAGDKLPAEEKEKIEKAVAELKEALKGED- 571
Query: 327 NVLLVEEMQQELELLQNTLRDIARAVIQ 354
VEE++ + E LQ L+ +A A+ Q
Sbjct: 572 ----VEEIKAKTEELQQALQKLAEAMYQ 595
>gnl|CDD|220368 pfam09730, BicD, Microtubule-associated protein Bicaudal-D. BicD
proteins consist of three coiled-coiled domains and are
involved in dynein-mediated minus end-directed transport
from the Golgi apparatus to the endoplasmic reticulum
(ER). For full functioning they bind with GSK-3beta
pfam05350 to maintain the anchoring of microtubules to
the centromere. It appears that amino-acid residues
437-617 of BicD and the kinase activity of GSK-3 are
necessary for the formation of a complex between BicD
and GSK-3beta in intact cells.
Length = 711
Score = 35.6 bits (82), Expect = 0.28
Identities = 48/221 (21%), Positives = 84/221 (38%), Gaps = 28/221 (12%)
Query: 598 EANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLK 657
E N E+Q+L++QL + +K SL A L + Q+ LEQS E + E K L
Sbjct: 255 ELNLSEIQKLKQQLEQVEREKASLLANLQELQTQLEQS-------EGALSEQHEKVNRLT 307
Query: 658 GQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINL 717
+ L E++ D DY N + E E L
Sbjct: 308 EHLNALRNLQASKEQQDGLDSEKDRGSHE--DGDYYEVDINGPEILECKYRVAVSEVGEL 365
Query: 718 KKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQ 777
K + + AL+ + + ++ +EKD + +Q +L S +K
Sbjct: 366 KAELK---------------ALKARYNELQERYEDEKDRLRNEIQNLAEKLLSL-EKSSH 409
Query: 778 QHEDALLRAEGDKQQALLIAQQDQKAI---QDRLSQVLKEL 815
+ ++ E + ++ +A + Q ++ QD L +EL
Sbjct: 410 EDQERSGDLEKELRKLTHVAGESQGSLNAAQDELVTFSEEL 450
Score = 32.5 bits (74), Expect = 2.2
Identities = 34/180 (18%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 1281 LMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETK 1340
L QQ+ Q+ERE+ L A Q L+ +++ A +++ K+ + + + AL+ + + E +
Sbjct: 264 LKQQLEQVEREKASLLANLQELQTQLEQSEGALSEQHEKVNRLTEHLNALRNLQASKEQQ 323
Query: 1341 LSQTKAAANSQSE-----AMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMK--- 1392
E +D E+ + +V E + + E + +
Sbjct: 324 DGLDSEKDRGSHEDGDYYEVDINGPEILECKYRVAVSE--VGELKAELKALKARYNELQE 381
Query: 1393 -CRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQE 1451
+ RL E + L ++L E + + + LE + ++L + E + +L+ Q+
Sbjct: 382 RYEDEKDRLRNEIQNLAEKLLSLEKSSHEDQERSGDLEKELRKLTHVAGESQGSLNAAQD 441
>gnl|CDD|234084 TIGR03007, pepcterm_ChnLen, polysaccharide chain length determinant
protein, PEP-CTERM locus subfamily. Members of this
protein family belong to the family of polysaccharide
chain length determinant proteins (pfam02706). All are
found in species that encode the PEP-CTERM/exosortase
system predicted to act in protein sorting in a number of
Gram-negative bacteria, and are found near the epsH
homolog that is the putative exosortase gene [Cell
envelope, Biosynthesis and degradation of surface
polysaccharides and lipopolysaccharides].
Length = 498
Score = 35.4 bits (82), Expect = 0.31
Identities = 28/165 (16%), Positives = 57/165 (34%), Gaps = 6/165 (3%)
Query: 1281 LMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETK 1340
+++ E ++ A ALKR++ S+ L ALE +
Sbjct: 209 AQEELEAARLELNEAIAQRDALKRQLGGEEPVLLAGSSV------ANSELDGRIEALEKQ 262
Query: 1341 LSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARL 1400
L + + + E+ L E+ + E + + + A
Sbjct: 263 LDALRLRYTDKHPDVIATKREIAQLEEQKEEEGSAKNGGPERGEIANPVYQQLQIELAEA 322
Query: 1401 DAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETN 1445
+AE +L+ ++ AR+ +LE + + L L ++ E N
Sbjct: 323 EAEIASLEARVAELTARIERLESLLRTIPEVEAELTQLNRDYEVN 367
>gnl|CDD|204414 pfam10211, Ax_dynein_light, Axonemal dynein light chain. Axonemal
dynein light chain proteins play a dynamic role in
flagellar and cilia motility. Eukaryotic cilia and
flagella are complex organelles consisting of a core
structure, the axoneme, which is composed of nine
microtubule doublets forming a cylinder that surrounds a
pair of central singlet microtubules. This
ultra-structural arrangement seems to be one of the most
stable micro-tubular assemblies known and is responsible
for the flagellar and ciliary movement of a large number
of organisms ranging from protozoan to mammals. This
light chain interacts directly with the N-terminal half
of the heavy chains.
Length = 189
Score = 34.1 bits (79), Expect = 0.31
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 634 QSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQ 693
Q++ K +LE E+++L ++E L+ +V L +LE EKR +E + ++ +
Sbjct: 117 QAEQGKSELEQEIKKLEEEKEELEKRVAELEAKLEAIEKREEEERQIEEKR-------HA 169
Query: 694 NQISNLKKQN 703
++I+ LKKQN
Sbjct: 170 DEIAFLKKQN 179
Score = 30.6 bits (70), Expect = 4.4
Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 398 REQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEK 457
R + + YES+ + M + + + + + ++ ++ EKE L K + L +
Sbjct: 94 RMTIAAYQTLYESS--VAFGMRKALQA-EQGKSELEQEIKKLEEEKEELEKRVAELEAKL 150
Query: 458 SALEKNKREINEMVESLNSN-LDKVQKNNSRLSKINESL 495
A+EK + E ++ E +++ + ++K N +L E +
Sbjct: 151 EAIEKREEEERQIEEKRHADEIAFLKKQNQQLKSQLEQI 189
>gnl|CDD|224234 COG1315, COG1315, Uncharacterized conserved protein [Function
unknown].
Length = 543
Score = 35.1 bits (81), Expect = 0.35
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 11/123 (8%)
Query: 1258 RGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQES 1317
G + +DPEIV + ++ L ++++ E L + AL + +
Sbjct: 393 IGSLKTAIDVGMDPEIVER-LKELTEEISLHEERLKKLTKLLVALVKVKIESKKNILPP- 450
Query: 1318 NKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLS 1377
+K + A+ K L + + KA Q+ E+ + V S
Sbjct: 451 DKESLLT----AVNNTKITLRNSIEKIKAE-----LEGLQEELEVVGIEGSVSVKNQVYS 501
Query: 1378 NVS 1380
V
Sbjct: 502 GVK 504
>gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell
division and chromosome partitioning].
Length = 570
Score = 35.0 bits (81), Expect = 0.37
Identities = 59/322 (18%), Positives = 134/322 (41%), Gaps = 26/322 (8%)
Query: 451 EMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRIN 510
+ L + + +E+ ++NE+VES N +++ ++ + + + +
Sbjct: 111 QQLTLIEEDIEQILEDLNELVESEEKNSEEIDHVLELYEELRRDVLANRHQYGEAAPELE 170
Query: 511 SDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG 570
++ E EL ++ D + A E L+ A+ L E + +LLA ++
Sbjct: 171 KKLENIEEELSQFVELTS--SGDYIEAREVLEEAEEHMIALRSIMERIPSLLAELQT--- 225
Query: 571 DVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQS 630
++ +++ L DM E+ Y + D L+RL+EQL LE
Sbjct: 226 ELPGQLQDLKAGYRDMKEE--GYHLEHVNIDSRLERLKEQLVENSELLTQLE-------- 275
Query: 631 HLEQSDVKKEQLEHEVQ---ELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASG 687
L++++ + ++ +++ +LL ++ K V L D ++A+E L ++
Sbjct: 276 -LDEAEEELGLIQEKIESLYDLLEREVEAKNVVEENLPILPDYLEKAKENNEHLKEEIER 334
Query: 688 LDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATV 747
+ Y + E + E+++ + + + + E +E + L+ L
Sbjct: 335 VKESY------RLAETELGSVRKFEKELKELESVLDEILENIEAQEVAYSELQDNLEEIE 388
Query: 748 KQITEEKDCELSRLQANLCQLQ 769
K +T+ +D E ++Q +L L+
Sbjct: 389 KALTDIED-EQEKVQEHLTSLR 409
Score = 34.3 bits (79), Expect = 0.71
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 17/189 (8%)
Query: 800 DQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKT 859
+ I RL ++ ++L E L +++ + A E++ I E L + + E K
Sbjct: 249 EHVNIDSRLERLKEQLVENSELLTQLELDEA---EEELGLIQEKIESLYDLLEREVEAKN 305
Query: 860 RTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQA----------QLLE 909
EE IL + K E L E E +K L+E ++ +V+ L E
Sbjct: 306 VVEENLPILPDYLEKAKENNEHLKEEIERVKESYRLAETELGSVRKFEKELKELESVLDE 365
Query: 910 TARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQART 969
++ E L+ +L + + L D E++K + LR K E E R+
Sbjct: 366 ILENIEAQEVAYSELQDNLEEIEKALTDIEDEQEKVQEHLTSLR----KDELEARENLER 421
Query: 970 IDEGLQKIA 978
+ L +I
Sbjct: 422 LKSKLHEIK 430
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein;
Provisional.
Length = 995
Score = 35.4 bits (82), Expect = 0.37
Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 32/182 (17%)
Query: 571 DVEAEMERLLLDRSDMNEQISKYEIT--------IEANDKELQRLQEQLASLRSDKESLE 622
++ EM+ ++ + I+ I + A D EL L + S + +L
Sbjct: 829 ALDEEMKIIMSIVKSIRSLIATLGIPNKTKPDCYVTAKDAELIEL---IESAENLISTLA 885
Query: 623 AILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQV---VRLNKELEDTEKRAQETKA 679
I + S + + + E + +++ + + + + L KEL EK+ A
Sbjct: 886 KIG--SVSVIPPIEEEAEVPKGCGFDVVDNKVIIYLNLDEFIDLKKELAKLEKK----LA 939
Query: 680 SLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAAL 739
L + K K+ E +++K N+E + +L EE +Q+ A+
Sbjct: 940 KLQKSLESY---------LKKISIPNYEDKVPE---DVRKLNDEKIDELNEEIKQLEQAI 987
Query: 740 EK 741
E+
Sbjct: 988 EE 989
Score = 31.5 bits (72), Expect = 5.9
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 601 DKELQRLQEQLASLRSDKESLEAIL----FDT---QSHLEQSDVKKEQLEHEVQELLVKQ 653
KEL +L+++LA L+ ES + ++ + + +D K ++L E+++L
Sbjct: 928 KKELAKLEKKLAKLQKSLESYLKKISIPNYEDKVPEDVRKLNDEKIDELNEEIKQLEQAI 987
Query: 654 ESLKGQ 659
E LK
Sbjct: 988 EELKSL 993
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y. Members of this family are
RNase Y, an endoribonuclease. The member from Bacillus
subtilis, YmdA, has been shown to be involved in
turnover of yitJ riboswitch [Transcription, Degradation
of RNA].
Length = 514
Score = 34.9 bits (81), Expect = 0.40
Identities = 36/164 (21%), Positives = 85/164 (51%), Gaps = 13/164 (7%)
Query: 545 KLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDK-- 602
++A++ L +E + + IE++K + E + LL+ + ++ + E+ E ++
Sbjct: 21 RIAEKKLGSAEELAKRI---IEEAKKEAETLKKEALLEAKEEVHKL-RAELERELKERRN 76
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR 662
ELQRL+ +L +E+L+ + E + K+++L ++ + L K+E L+ +
Sbjct: 77 ELQRLERRL---LQREETLDRKMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELIAE 133
Query: 663 LNKELED-TEKRAQETKASLVQQASGLDADYQNQISNLKKQNEE 705
+ELE + +E K L+++ ++ + +++ + L K+ EE
Sbjct: 134 QREELERISGLTQEEAKEILLEE---VEEEARHEAAKLIKEIEE 174
Score = 33.7 bits (78), Expect = 1.1
Identities = 29/165 (17%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 667 LEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVT 726
+E+ +K A+ K + +A + ++ L+ + E + + E L+++ +
Sbjct: 38 IEEAKKEAETLKKEALLEA-------KEEVHKLRAELERELKERRNELQRLERRLLQREE 90
Query: 727 KLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRA 786
L + E + E E+K+ ELS + NL + + ++++ + + L R
Sbjct: 91 TLDRKMESLDKKEEN---------LEKKEKELSNKEKNLDEKEEELEELIAEQREELERI 141
Query: 787 EG---DKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRE 828
G ++ + +L+ + +++A + + + EE K D+ +E
Sbjct: 142 SGLTQEEAKEILLEEVEEEARHEAAKLIKEIEEEAKEEADKKAKE 186
Score = 31.4 bits (72), Expect = 4.7
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 1489 TELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQERLDTCQASLAELR 1548
E R E+Q L+R L+ E L + ++ L E E ++ LD + L EL
Sbjct: 72 KERRNELQRLERRLLQREETLDRKMESLDKKEENLEKKEKELSNKEKNLDEKEEELEELI 131
Query: 1549 RQQVNRLENQDDLKAMTQALKREI--KDLSDAHTQESNKM 1586
+Q LE + +TQ +EI +++ + E+ K+
Sbjct: 132 AEQREELER---ISGLTQEEAKEILLEEVEEEARHEAAKL 168
Score = 31.0 bits (71), Expect = 6.1
Identities = 26/126 (20%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 1287 QIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKA 1346
++ + R +L+ + + E++ L Q + + +++ +E E +LS +
Sbjct: 59 EVHKLRAELERELKERRNELQRLERRLLQREETLDRKMESLDKKEENLEKKEKELSNKEK 118
Query: 1347 AANSQSEAMDQKNEELQHLREKVLTL------ELTLSNVSEEKSQGDDKLMKCRESGARL 1400
+ + E +++ E + E++ L E+ L V EE KL+K E A+
Sbjct: 119 NLDEKEEELEELIAEQREELERISGLTQEEAKEILLEEVEEEARHEAAKLIKEIEEEAKE 178
Query: 1401 DAEKRA 1406
+A+K+A
Sbjct: 179 EADKKA 184
Score = 31.0 bits (71), Expect = 7.1
Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 39/158 (24%)
Query: 1334 KYALETKLSQTKAAA-----NSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDD 1388
K E KL + A ++ EA K E L +E+V L
Sbjct: 20 KRIAEKKLGSAEELAKRIIEEAKKEAETLKKEALLEAKEEVHKLR--------------- 64
Query: 1389 KLMKCRESGARLDAEKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHK 1448
A L+ E + ++EL R E R+ LQR E R L +KE NL K
Sbjct: 65 ---------AELERELKERRNELQRLERRL----LQR---EETLDRKMESLDKKEENLEK 108
Query: 1449 LQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASA 1486
++ ++ +N+ EE L+ I + LER S
Sbjct: 109 KEKELSNKEKNLDEKEE---ELEELIAEQREELERISG 143
>gnl|CDD|235549 PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.
Length = 619
Score = 34.8 bits (81), Expect = 0.44
Identities = 32/163 (19%), Positives = 68/163 (41%), Gaps = 27/163 (16%)
Query: 433 KAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKIN 492
+ ++ + + K E L+ E +L ++I+E+VE L +V+ L ++
Sbjct: 239 EKKVEGRLAQHKKYAKLREKLKEELKSLRLTSKQIDELVEQLRDINKRVRGQERELLRLV 298
Query: 493 ESLQSEKLFLQNELDR-INSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELL 551
E L K+ ++ L +++D +E +++ + K E L
Sbjct: 299 ERL---KMPRKDFLKLFQGNELDITWLE-------------------KEIASGKPWSEFL 336
Query: 552 EQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYE 594
+ +E++ L +E + + +E L ++N QISK E
Sbjct: 337 VRVYDEIKKLQQELEAIEEETGLTIEELK----EINRQISKGE 375
>gnl|CDD|113356 pfam04582, Reo_sigmaC, Reovirus sigma C capsid protein.
Length = 326
Score = 34.5 bits (79), Expect = 0.46
Identities = 20/118 (16%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 398 REQLHTMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEK 457
E+L ++ S ES +S +++ L++ L L L+ ++ L+
Sbjct: 34 YERLTNLESATASLSESVSTISSRLSDLSADLQDMTTSLDDAKATLNGLITTVQALQTSV 93
Query: 458 SALEKNKREINEMVESLNSNLDKVQK----NNSRLSKINESLQSEKLFLQNELDRINS 511
+L +++ V + ++ + +Q N++ +S + S+ + L + + R+ S
Sbjct: 94 DSLSSELADLSLTVSAHDAAISDLQTTVHANSTDISNLKSSVSANGLNITDLEQRVKS 151
Score = 31.4 bits (71), Expect = 3.8
Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 1139 LLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQYDAYK-SMDCH 1197
L LE++ + +S+I S L ++A +L + +A L + A + S+D
Sbjct: 37 LTNLESATASLSESVSTISSRLSDLSADLQDMTTSLDDAKATLNGLITTVQALQTSVDSL 96
Query: 1198 TDRSSDLERYRAAQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGKMTSPSRRYSPV 1257
+ +DL +A H ++ + + H + + N L S G +T +R +
Sbjct: 97 SSELADLSLTVSA--HDAAISDLQTTVHANSTD-ISN-LKSSVSANGLNITDLEQRVKSL 152
Query: 1258 RGGEGGEGLIDVDPEIVRKGVRNL 1281
G GL P + GV +L
Sbjct: 153 ESG-SSHGLSFSPPLSLADGVVSL 175
Score = 30.7 bits (69), Expect = 8.3
Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 14/141 (9%)
Query: 1457 CRNITGLEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKL 1516
++T + ER T+L+ + L + T+ L D S + Q L
Sbjct: 27 PGDLTPIYERLTNLE--------------SATASLSESVSTISSRLSDLSADLQDMTTSL 72
Query: 1517 KQLQKLLHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLS 1576
+ L+ + LQ +D+ + LA+L DL+ A +I +L
Sbjct: 73 DDAKATLNGLITTVQALQTSVDSLSSELADLSLTVSAHDAAISDLQTTVHANSTDISNLK 132
Query: 1577 DAHTQESNKMAQAQQTMRALQ 1597
+ + + +Q +++L+
Sbjct: 133 SSVSANGLNITDLEQRVKSLE 153
>gnl|CDD|236942 PRK11637, PRK11637, AmiB activator; Provisional.
Length = 428
Score = 34.7 bits (80), Expect = 0.47
Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 45/266 (16%)
Query: 554 NKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLAS 613
N+++++++ I + V + ++ R+ + Q+ K E I ++L+ Q L
Sbjct: 45 NRDQLKSIQQDIAAKEKSVRQQQQQ----RASLLAQLKKQEEAISQASRKLRETQNTLNQ 100
Query: 614 LRSDKESLEAIL------FDTQSHL--EQSDVKKEQLEHE-VQELLVKQESLKGQVVR-- 662
L + L A + Q L Q D Q EH +Q +L +ES +G+ +
Sbjct: 101 LNKQIDELNASIAKLEQQQAAQERLLAAQLDAAFRQGEHTGLQLILSGEESQRGERILAY 160
Query: 663 ---LNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKK 719
LN+ ++T ++T+ L Q K + EE K +++K L +
Sbjct: 161 FGYLNQARQETIAELKQTREELAAQ---------------KAELEE---KQSQQKTLLYE 202
Query: 720 QNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQH 779
Q + ++ EQ R +K L ++ ++ +LS L+AN +L+ D I +
Sbjct: 203 QQAQ-----QQKLEQARNERKKTL-TGLESSLQKDQQQLSELRANESRLR---DSIARAE 253
Query: 780 EDALLRAEGDKQQALLIAQQDQKAIQ 805
+A RAE + ++A + + ++A +
Sbjct: 254 REAKARAEREAREAARVRDKQKQAKR 279
Score = 31.2 bits (71), Expect = 4.9
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 1320 MAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLT-LELTLSN 1378
+A+ +QT L +K LE K SQ K Q +A QK E+ ++ R+K LT LE +L
Sbjct: 172 IAELKQTREELAAQKAELEEKQSQQKTLLYEQ-QAQQQKLEQARNERKKTLTGLESSLQK 230
Query: 1379 VSEEKSQGDDKLMKCRESGARLDAEKRALQDELSRTEARVTKLELQ 1424
++ S+ + R+S AR + E +A + +R ARV + Q
Sbjct: 231 DQQQLSELRANESRLRDSIARAEREAKARAEREAREAARVRDKQKQ 276
>gnl|CDD|220614 pfam10174, Cast, RIM-binding protein of the cytomatrix active zone.
This is a family of proteins that form part of the CAZ
(cytomatrix at the active zone) complex which is involved
in determining the site of synaptic vesicle fusion. The
C-terminus is a PDZ-binding motif that binds directly to
RIM (a small G protein Rab-3A effector). The family also
contains four coiled-coil domains.
Length = 774
Score = 35.0 bits (80), Expect = 0.47
Identities = 78/399 (19%), Positives = 147/399 (36%), Gaps = 17/399 (4%)
Query: 1283 QQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKLS 1342
QQ+ + E + ++A + E+ L D + +M + QQT+ A EE L L
Sbjct: 107 QQLEKSEGQFSRIQAERERQAMELFLLRDTLEKLQLRMERLQQTLDARDEEIKKLLEMLQ 166
Query: 1343 QTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDA 1402
+A ++ E D + E + L E++ + + + R DA
Sbjct: 167 SKGLSAKAEEE--DSERLGRIREAEDQQSHLEVLLEQKEKEHMMLREEIHQKLQMERDDA 224
Query: 1403 EKRALQDELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITG 1462
+ A Q + + ++ + E E + RLQ + + + +
Sbjct: 225 KTEASQKLIDEKDTKIKEFEKMLEKAENEIYRLQ-------SRCDTSEADRNRLDKEVEA 277
Query: 1463 LEERCTSLKTTIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKL 1522
++K D+ L R L+ E++TL D + L +L++
Sbjct: 278 ERSALAAMKAKCDRAAQELSRKKTELLGLQTELETLANQDSDMR-------QHLDKLKED 330
Query: 1523 LHSAENEKRVLQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQE 1582
L AE EK +LQ +D + L + + + EI+D+ D + +
Sbjct: 331 LTRAEQEKAILQTEVDALRYELERKHNTLTKKTASLQAAQEEKATYAGEIEDMRDRYEKT 390
Query: 1583 SNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQLRMSQWPSE 1642
K+ Q+ + LQE E +L + K S + A LE L + E
Sbjct: 391 ERKLRVLQKKIENLQETFRRKERRLKEEKERLRSLQTDTNTDTALEKLEKALAEKERIIE 450
Query: 1643 SPMNGGDSEEITKLCRERSELRNKLENLHDKIQMLRDQL 1681
D +E + E + + E+L +++Q L+ +L
Sbjct: 451 RLKEQRDRDERYEQ-EEFETYKKEFEDLKEEVQNLQLKL 488
Score = 33.1 bits (75), Expect = 1.6
Identities = 94/534 (17%), Positives = 218/534 (40%), Gaps = 38/534 (7%)
Query: 431 QTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSK 490
K Q+ + + EA K I+ + EK + + L S D + + +RL K
Sbjct: 214 HQKLQMERDDAKTEASQKLIDEKDTKIKEFEKMLEKAENEIYRLQSRCDTSEADRNRLDK 273
Query: 491 INESLQSEKLFLQNELDRINSDMDAREVELRG-------KEDMNRRLREDLLIANEDLKN 543
E+ +S ++ + DR ++ ++ EL G + + +R+ L EDL
Sbjct: 274 EVEAERSALAAMKAKCDRAAQELSRKKTELLGLQTELETLANQDSDMRQHLDKLKEDLTR 333
Query: 544 AKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKE 603
A+ K +L+ + ++ L + A ++ +++ +I E +++
Sbjct: 334 AEQEKAILQTEVDALRYELERKHNTLTKKTASLQAAQEEKATYAGEIEDMRDRYEKTERK 393
Query: 604 LQRLQEQLASLRSDKESLEAILFDTQSHLE--QSDVKKEQLEHEVQELLVKQESLKGQVV 661
L+ LQ+++ +L+ E L + + L Q+D + ++++ L ++E + ++
Sbjct: 394 LRVLQKKIENLQETFRRKERRLKEEKERLRSLQTDTNTDTALEKLEKALAEKERIIERLK 453
Query: 662 RLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQN 721
E E+ ET Y+ + +LK++ + KL+E ++ L+
Sbjct: 454 EQRDRDERYEQEEFET--------------YKKEFEDLKEEVQNLQLKLSERELQLELLK 499
Query: 722 EECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHED 781
EE V+KL + + R+ LE + H +++I E+ + L+ +S
Sbjct: 500 EE-VSKLASNQLKQRSDLE-RAHIELEKIREKHEKLEKELKRLRANPESADRGSAVDAGT 557
Query: 782 ALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTIN 841
+ RA+ + + DRL L++ E+E+ + A E ++ +
Sbjct: 558 SRSRADSAGARNEV----------DRLLDRLEKAEQERDDTEMEAGRLA--KELEKAQRH 605
Query: 842 TLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDK-V 900
++Q ++E + E + + S+ + E T+ + H + V
Sbjct: 606 LTKQQEKTEATRIEFERKSAELLEEAERLEKSEAEEETLRQSTQIGHAQAAAHNHIEHHV 665
Query: 901 DTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLRE 954
+++ L + ++ E ++ L++ + L + E+ K+ + N++L++
Sbjct: 666 QKLESDLKQLRAEREQLVAQLEKSQQSLMEFQQELNAAEAERRKHLEENRELKQ 719
>gnl|CDD|192773 pfam11559, ADIP, Afadin- and alpha -actinin-Binding. This family
is found in mammals where it is localised at cell-cell
adherens junctions, and in Sch. pombe and other fungi
where it anchors spindle-pole bodies to spindle
microtubules. It is a coiled-coil structure, and in
pombe, it is required for anchoring the minus end of
spindle microtubules to the centrosome equivalent, the
spindle-pole body. The name ADIP derives from the family
being composed of Afadin- and alpha -Actinin-Binding
Proteins Localised at Cell-Cell Adherens Junctions.
Length = 149
Score = 33.0 bits (76), Expect = 0.53
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 829 SAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE 888
E IN + L + LE ++ LE + L++E E L E
Sbjct: 24 DFAVEENIVRIINVIYSLLQQRDRDLEFRES--------LEETLRKLEAEIERLQNTIER 75
Query: 889 LKVQLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLAD 937
LK QL E ++ +QA+ + ++LK E ++ ++++ K +
Sbjct: 76 LKTQLEDLERELALLQAKERQLEKKLKTLEQKLKNEKEEVQRLKNIIQQ 124
>gnl|CDD|223996 COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate
transport and metabolism].
Length = 502
Score = 34.7 bits (80), Expect = 0.55
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 20/120 (16%)
Query: 1608 SQTKAAANSQNELEVKEVARAGLESQLRMSQWPSESPMNGGDSEEITKLCRER-SELRNK 1666
+ KA ++ EV AR W + P +E+ + E +L +
Sbjct: 14 TSVKAVLFDEDGGEVVATARFENPVSTPQPGWAEQDP------DELWQAILEALRQLLEE 67
Query: 1667 LENLHDKI-------QM----LRDQLNSEIKRRQLYIYRDTRAGKEMQQLRQALGDSLRT 1715
+ D I Q L D N E R + ++ DTRA +E+++L + LG
Sbjct: 68 SKIDPDAIAAIGISGQGHGLVLLDA-NGEPLRPAI-LWNDTRAAEEVEELEERLGGEALY 125
>gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein.
Mitofilin controls mitochondrial cristae morphology.
Mitofilin is enriched in the narrow space between the
inner boundary and the outer membranes, where it forms a
homotypic interaction and assembles into a large
multimeric protein complex. The first 78 amino acids
contain a typical amino-terminal-cleavable mitochondrial
presequence rich in positive-charged and hydroxylated
residues and a membrane anchor domain. In addition, it
has three centrally located coiled coil domains.
Length = 493
Score = 34.2 bits (79), Expect = 0.67
Identities = 54/281 (19%), Positives = 110/281 (39%), Gaps = 50/281 (17%)
Query: 602 KELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVV 661
L E++A + S+ A + + E LE ++ELL + S
Sbjct: 85 PRQSGLSEEVAEAEAKATSVAA----EATTPKSIQELVEALEELLEELLKETAS------ 134
Query: 662 RLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQN 721
+ +++ + S+ + L D ++ I++ K++ ++ KL E K +++
Sbjct: 135 --DPVVQELVSIFNDLIDSI--KEDNLKDDLESLIASAKEELDQLSKKLAELKAEEEEEL 190
Query: 722 EECVTKLTEE-KEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHE 780
E + + EE ++ L +L + + ++ E R + L ++
Sbjct: 191 ERALKEKREELLSKLEEELLARLESKEAALEKQLRLEFEREKEEL-----------RKKY 239
Query: 781 DALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDR-IKRESAGRSEQDRNT 839
+ LR E ++Q A + +L L E L R +E + E++RN
Sbjct: 240 EEKLRQELERQAE---------AHEQKLKNELALQAIE---LQREFNKEIKEKVEEERN- 286
Query: 840 INTLREQLNRTVAKLEELKTRTEE-EKAILERKISDLKSER 879
R AKL EL +R + EKA+ R ++ ++ +
Sbjct: 287 --------GRL-AKLAELNSRLKGLEKALDSRSEAEDENHK 318
>gnl|CDD|223542 COG0466, Lon, ATP-dependent Lon protease, bacterial type
[Posttranslational modification, protein turnover,
chaperones].
Length = 782
Score = 34.5 bits (80), Expect = 0.71
Identities = 36/190 (18%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Query: 444 EALVKNIEMLRVE----KSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQS-E 498
L E E +REI +V S+ S ++ K N ++ E LQS
Sbjct: 101 SKLSDEEEFFEAEIELLPDEPIDEEREIEALVRSILSEFEEYAKLNKKIP--PEELQSLN 158
Query: 499 KLFLQNEL-DRINSDMDAREVELRGK---EDMNRRLREDLLIANEDLKNAKLAKEL---- 550
+ +L D I + + + E + D+ RL + L + +++ +L K +
Sbjct: 159 SIDDPGKLADTIAAHLPLKLEEKQEILETLDVKERLEKLLDLLEKEIDLLQLEKRIRKKV 218
Query: 551 ---LEQN------KEEMQTL---LAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIE 598
+E++ +E+++ + L + K +VE E+ +++ + ++ + +
Sbjct: 219 KEQMEKSQREYYLREQLKAIQKELGEDDDDKDEVEELREK--IEKLKLPKEAKE-KA--- 272
Query: 599 ANDKELQRLQ 608
+KEL++L+
Sbjct: 273 --EKELKKLE 280
>gnl|CDD|227900 COG5613, COG5613, Uncharacterized conserved protein [Function
unknown].
Length = 400
Score = 33.8 bits (77), Expect = 0.78
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 231 SATEQDLSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLK 290
+ LSK + + + G NG AG++A NAE +L ++ + V L+
Sbjct: 293 EKAGEALSKCFNVFAKISTVALGVTNG--IRQAGTTALNAEAAQLQADSQLAAADVQNLQ 350
Query: 291 SENNAMANESKQKEERVEELLKRI 314
+ E K + E+ +E ++ I
Sbjct: 351 RIIERLKEELKLELEKAQEEMENI 374
>gnl|CDD|237830 PRK14835, PRK14835, undecaprenyl pyrophosphate synthase; Provisional.
Length = 275
Score = 33.7 bits (77), Expect = 0.85
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 1060 KDRSDLSHQLSLLQRKKENVVED----LARLKQKY-EQSVEMNNRVNKNLEDLVKECEEK 1114
+ +++ ++L +R+ + D R++ + + +V + LE+L + E
Sbjct: 101 RSPAEVETLMNLFEREARRMAVDPRIHANRVRVRAIGRHDGFPPKVLEALEELEERTEGH 160
Query: 1115 EVVLLDLCARLGGAEERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHA 1170
E +LL++ GG EE V A + LL+ A+ K E + + T I+A Y A
Sbjct: 161 EGMLLNIAVGYGGREEIVDAVKSLLLEAAATGKSPEEVAAEL--TPEHISAHLYTA 214
>gnl|CDD|221489 pfam12252, SidE, Dot/Icm substrate protein. This family of proteins
is found in bacteria. Proteins in this family are
typically between 397 and 1543 amino acids in length.
This family is the SidE protein in the Dot/Icm pathway of
Legionella pneumophila bacteria. There is little
literature describing the family.
Length = 1443
Score = 34.1 bits (78), Expect = 0.85
Identities = 79/372 (21%), Positives = 148/372 (39%), Gaps = 81/372 (21%)
Query: 425 LTSQLDQTKAQLAQVGREKEA-LVKNIEMLRVEKSAL-EKNKREINEMVESLNSNLDKVQ 482
L Q+ + +L + R +V + E +R AL E + I E+ ++ +NLD V+
Sbjct: 1072 LREQIQSVRQELESLQRAVVTPVVTDEEKVRERYDALIENTSKRITELEKAKLANLDVVK 1131
Query: 483 KNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLK 542
K S L+ +LQ E L+NE R+++ D +V+ E + ++L+
Sbjct: 1132 KAISNLN----NLQQEVTLLRNEKIRMHTGTD--KVDFSDIEKLEKQLQV---------I 1176
Query: 543 NAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDK 602
+ KLA L + +++ L K ++S++ +I+K+ T D
Sbjct: 1177 DTKLADAYLLEVTKQISALEKEKPK--------------NQSELKSKIAKFFDTTA--DI 1220
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR 662
E+ R E++ S K+ L+ SD+ K L G +
Sbjct: 1221 EVLR-NERIKKHGSSKDPLDL-----------SDLDK----------------LSGNLQG 1252
Query: 663 LNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNE 722
+N+ L ++SL Q ++ Q +K+ ++ L + + L K
Sbjct: 1253 VNQSLVSILITT--IRSSLNQMKP---KTFEMQ----EKEIQQNFELLAKLEKTLDKS-- 1301
Query: 723 ECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDA 782
+ KL E+ +++ L K A E+ +LQ L + + ++CQ H D
Sbjct: 1302 DTAEKLREDIPKLKDLLIAKQKAYP---------EMVQLQYKSEALITQLRELCQAHHDD 1352
Query: 783 LLRAEGDKQQAL 794
L + + Q L
Sbjct: 1353 LAKTRTARLQEL 1364
>gnl|CDD|235461 PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.
Length = 425
Score = 33.9 bits (79), Expect = 0.86
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 29/102 (28%)
Query: 840 INTLREQLNRTVAKLE-------------------ELKTRTEEEKAILERK-----ISDL 875
I +RE L EL+T EE +A ER I
Sbjct: 4 IKLIRENPEAVKEALAKRGFPLDVDELLELDEERRELQTELEELQA--ERNALSKEIGQA 61
Query: 876 KS---EREALVTESEELKVQLHLSEDKVDTVQAQLLETARRL 914
K + EAL+ E +ELK ++ E ++D ++A+L E R+
Sbjct: 62 KRKGEDAEALIAEVKELKEEIKALEAELDELEAELEELLLRI 103
Score = 33.1 bits (77), Expect = 1.5
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 281 ELKSQVTVLKSENNAMANE---SKQKEERVEELLKRIHTLEARVEEADQNVLLVEEMQQE 337
EL++++ L++E NA++ E +K+K E E L+ + L+ ++ + E
Sbjct: 39 ELQTELEELQAERNALSKEIGQAKRKGEDAEALIAEVKELKEEIKALE----------AE 88
Query: 338 LELLQNTLRDIARAV 352
L+ L+ L ++ +
Sbjct: 89 LDELEAELEELLLRI 103
>gnl|CDD|236795 PRK10920, PRK10920, putative uroporphyrinogen III
C-methyltransferase; Provisional.
Length = 390
Score = 33.5 bits (77), Expect = 0.89
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 603 ELQRLQEQLASLR----SDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKG 658
L QL +L+ S K+ LE IL L+Q++ ++ L ++ EL K ++ G
Sbjct: 68 TNDALANQLTALQKAQESQKQELEGILKQQAKALDQANRQQAALAKQLDELQQKVATISG 127
>gnl|CDD|226513 COG4026, COG4026, Uncharacterized protein containing TOPRIM domain,
potential nuclease [General function prediction only].
Length = 290
Score = 33.3 bits (76), Expect = 0.90
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 545 KLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLD--RSDMNEQISKYEITIEANDK 602
++ +EL E+ EE++ ++ HIE+ K + ++E + ++ R ++ + + A K
Sbjct: 69 RVGRELAEKFFEELRGMVGHIERMKIPIGHDVEHIDVELVRKELKNAL------VRAGLK 122
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR 662
LQR+ E L+ D E L+ L + Q E+ + E+LE E +E+ + + L+ + R
Sbjct: 123 TLQRVPE-YMDLKEDYEELKEKLEELQKEKEELLKELEELEAEYEEVQERLKRLEVENSR 181
Query: 663 LNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQ 702
L + L+ + K + G++ + IS+L K+
Sbjct: 182 LEEMLKKLPGEVYDLKKRWDELEPGVELPEEELISDLVKE 221
Score = 31.8 bits (72), Expect = 3.4
Identities = 18/66 (27%), Positives = 37/66 (56%)
Query: 268 TNAEKDKLVKENSELKSQVTVLKSENNAMANESKQKEERVEELLKRIHTLEARVEEADQN 327
EK++L+KE EL+++ ++ + E+ + EE +++L ++ L+ R +E +
Sbjct: 147 LQKEKEELLKELEELEAEYEEVQERLKRLEVENSRLEEMLKKLPGEVYDLKKRWDELEPG 206
Query: 328 VLLVEE 333
V L EE
Sbjct: 207 VELPEE 212
Score = 30.3 bits (68), Expect = 9.0
Identities = 32/147 (21%), Positives = 57/147 (38%), Gaps = 9/147 (6%)
Query: 466 EINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKED 525
++ E E L L+++QK L K E L++E +Q L R+ + E L+
Sbjct: 132 DLKEDYEELKEKLEELQKEKEELLKELEELEAEYEEVQERLKRLEVENSRLEEMLKKLPG 191
Query: 526 MNRRLR------EDLLIANEDLKNAKLAKELLEQNKEEMQT---LLAHIEKSKGDVEAEM 576
L+ E + E+ + L KE L ++++ + A EK + +
Sbjct: 192 EVYDLKKRWDELEPGVELPEEELISDLVKETLNLAPKDIEGQGYIYAEDEKEVEILLGTV 251
Query: 577 ERLLLDRSDMNEQISKYEITIEANDKE 603
R D E++ + IE E
Sbjct: 252 YIAAPSREDAVEELEIIKEAIEEVIPE 278
>gnl|CDD|225324 COG2604, COG2604, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 594
Score = 33.9 bits (78), Expect = 0.92
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 21/134 (15%)
Query: 425 LTSQLDQTKAQLAQVGREKEALVKNIEM-LRVEKSALEKNKREINEMVESLNSNLDKVQK 483
+ L +Q V + + + KN + E A +EI E V+S + L+K+
Sbjct: 461 IKLILLSNNSQEKAVLKLLQKIKKNNDFIKEFETDA--LKLQEILEKVDSKSEKLEKISA 518
Query: 484 NNSRLSKINESLQSEKLFLQNEL---DRINSDMDAREVELRGKEDMNRRLREDLLIANED 540
+ I E K+ + E+ + ++ + K ++ ED
Sbjct: 519 K---IDNIKELFDESKMSILQEILQPALHHIEL---NIARIYKLNIK---------DKED 563
Query: 541 LKNAKLAKELLEQN 554
N K LE
Sbjct: 564 FLNKLYIKAHLEWL 577
>gnl|CDD|224486 COG1570, XseA, Exonuclease VII, large subunit [DNA replication,
recombination, and repair].
Length = 440
Score = 33.8 bits (78), Expect = 0.95
Identities = 34/185 (18%), Positives = 75/185 (40%), Gaps = 29/185 (15%)
Query: 723 ECVTKLTEEKEQVRAALEKKLHATVKQ-ITEEK--------DCELSRLQANLCQLQSHID 773
E V + E Q L+++LH +++ + ++K + + L + Q +D
Sbjct: 257 ELVVPDSAELLQQLDQLQRRLHRALRRLLDQKKQRLEHLARRLQFRSPERLLSEQQQRLD 316
Query: 774 KICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRS 833
++ + AL + L + +Q + + RL+ ++ ++ R+++
Sbjct: 317 ELAIRLRRAL-------ENQLALKKQRLERLTQRLNPQIQRQQQ------RLQQLERRLD 363
Query: 834 EQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKV-- 891
+ R + RE+L V +LE L A L R + ++ E ++ +LK
Sbjct: 364 KALRRQLKRKRERLEALVEQLESL-----SPLATLARGYAVVRKENGQVIKSVADLKAGD 418
Query: 892 QLHLS 896
+L L
Sbjct: 419 RLTLR 423
>gnl|CDD|222160 pfam13476, AAA_23, AAA domain.
Length = 204
Score = 32.9 bits (75), Expect = 0.98
Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 2/162 (1%)
Query: 694 NQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITEE 753
+ S LKK + K E + + + V E + + + + +
Sbjct: 45 GKTSRLKKSKGRGIVKGDIEIEKDEGKKKTYVEITFENNKGKLKLRLIEESRELTKKKGK 104
Query: 754 KDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLK 813
K + + +LQ ID++ + ++ L Q+ L + +K ++RL ++ K
Sbjct: 105 KVKKSILEIVEIDELQEFIDELLKSDKEILPLLLYLGQERLEELKFKRKEKKERLEELEK 164
Query: 814 ELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLE 855
ELEE + D +++ ++ + + L+E+L + +LE
Sbjct: 165 ELEELEDEKDLLEKLL--EEKEKKKELEELKEELEELLEELE 204
>gnl|CDD|234352 TIGR03779, Bac_Flav_CT_M, Bacteroides conjugative transposon TraM
protein. Members of this protein family are designated
TraM and are found in a proposed transfer region of a
class of conjugative transposon found in the Bacteroides
lineage [Cellular processes, DNA transformation].
Length = 410
Score = 33.6 bits (77), Expect = 1.0
Identities = 21/127 (16%), Positives = 51/127 (40%), Gaps = 10/127 (7%)
Query: 261 LSAGSSATNAEKDKLVKEN---SELKSQVTVLKSENNAMAN-ESKQKEERVEELLKRIHT 316
S+ S + E D+ + ++S + N + + K + +ELL+ +
Sbjct: 95 YSSSDSGFDEEPDEPAETAGSLRPIRSSAAAYRDINRELGSFYEYPKTDEEKELLREVEE 154
Query: 317 LEARVEEADQNVLLVEEMQQELELLQNTLRDIARAVIQDAEGKDIPSRPAPLKRHATFSA 376
LE+R+ E++++L L++ + A+ G++ K+ S
Sbjct: 155 LESRLATEPS---PAPELEEQLALMEKSYELAAK---YMPRGQERLPVAPESKKGKKPSV 208
Query: 377 RPSTSIK 383
+P +++
Sbjct: 209 QPVRAVE 215
>gnl|CDD|226549 COG4063, MtrA, Tetrahydromethanopterin S-methyltransferase, subunit A
[Coenzyme metabolism].
Length = 238
Score = 33.2 bits (76), Expect = 1.0
Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 22/109 (20%)
Query: 1077 ENVVEDLARLKQKYEQSVEMNNRVNKNLEDL------VKECEEKEVVLLD-----LCARL 1125
EN+ ++ ++++Q VE+ + ++ +ED V+EC EK+ + +
Sbjct: 115 ENIPDEAV---ERFQQQVELVDLID--VEDPDEITAKVEECVEKDPGAYEEEPMVIEVEE 169
Query: 1126 GGAEER----VRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHA 1170
G EE + S +E+ +D+ + IG + A Y++
Sbjct: 170 EGEEEEEEGVAKPVSGETAIIESRMRDIMAGMKCIGELNKFHAG--YYS 216
>gnl|CDD|173155 PRK14692, PRK14692, lagellar hook-associated protein FlgL;
Provisional.
Length = 749
Score = 33.8 bits (77), Expect = 1.0
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 1302 LKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALE---TKLSQTKAAANSQSEAMDQK 1358
L+ EIK L S Q +M+ALQ+ LE K++Q + +NSQ+ + +
Sbjct: 52 LEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQT-SREAI 110
Query: 1359 NEELQHLREKVLTLELTLSN 1378
+EL+ ++E ++ L T N
Sbjct: 111 AKELERIKESIVQLANTSVN 130
Score = 33.0 bits (75), Expect = 1.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 1568 LKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALE---TKLSQTKAAANSQNELE 1621
L+ EIK L S Q +M+ALQ+ LE K++Q + +NSQ E
Sbjct: 52 LEYEIKTLEQVKESTSRAQEMTQNSMKALQDMVKLLEDFKVKVTQAASDSNSQTSRE 108
>gnl|CDD|237178 PRK12705, PRK12705, hypothetical protein; Provisional.
Length = 508
Score = 33.5 bits (77), Expect = 1.1
Identities = 26/144 (18%), Positives = 61/144 (42%), Gaps = 3/144 (2%)
Query: 760 RLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEK 819
LQ + + ++ + ++ LLR ++Q +++ + ++RL Q ++L+
Sbjct: 38 ILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQREEERLVQKEEQLDARA 97
Query: 820 CTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEE--KAILERKISDLKS 877
LD ++ + R + L E + +L + T E+ K +L+ ++L+
Sbjct: 98 EKLDNLENQLEEREKALSARELELEELEKQLDNELYRVAGLTPEQARKLLLKLLDAELEE 157
Query: 878 EREALVTESEELKVQLHLSEDKVD 901
E+ V + EE + L +
Sbjct: 158 EKAQRVKKIEE-EADLEAERKAQN 180
Score = 32.0 bits (73), Expect = 3.8
Identities = 35/169 (20%), Positives = 62/169 (36%), Gaps = 18/169 (10%)
Query: 798 QQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRS-EQDRNTINTLREQLNRTVAKLEE 856
Q+ K + L + KE EE+ +E R Q R RE+L R E
Sbjct: 29 QRLAKEAERILQEAQKEAEEKLEAALLEAKELLLRERNQQRQEARREREELQRE---EER 85
Query: 857 LKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLKE 916
L + E L+ + L + L + L + E +++ ++ QL L
Sbjct: 86 LVQKEE----QLDARAEKLDNLENQLEEREKALSAR----ELELEELEKQL---DNELYR 134
Query: 917 AENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRD 965
+ + LL L D+ E++K + K E + E + ++
Sbjct: 135 VAGLTPEQARKLL---LKLLDAELEEEKAQRVKKIEEEADLEAERKAQN 180
>gnl|CDD|116029 pfam07407, Seadorna_VP6, Seadornavirus VP6 protein. This family
consists of several VP6 proteins from the Banna virus as
well as a related protein VP5 from the Kadipiro virus.
Members of this family are typically of around 420
residues in length. The function of this family is
unknown.
Length = 420
Score = 33.5 bits (76), Expect = 1.1
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Query: 1388 DKLMKCRESGARLDAEKRALQDELSRTEAR------VTKLEL-----QRVALEGDQQRLQ 1436
D+L RE A+L E AL+ ++ R E+ V K+EL R+ D+ R
Sbjct: 32 DELAALREENAKLKKENEALKTKIHRLESDWTTSDIVEKIELMDAQFDRIGKIMDKMREP 91
Query: 1437 MLLQEKETNLH 1447
ML + + LH
Sbjct: 92 MLFKRDDIELH 102
>gnl|CDD|227250 COG4913, COG4913, Uncharacterized protein conserved in bacteria
[Function unknown].
Length = 1104
Score = 33.8 bits (77), Expect = 1.1
Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 6/143 (4%)
Query: 1281 LMQQVAQIERERDDLKAMTQALKREIKDL-SDAHTQESNKMAQAQQTMRALQEEKYALET 1339
+V + E D + M +K + H S K A R + + L+
Sbjct: 314 AKSKVESAKIETDRAREMETLAHDNVKQIVGAQHGILSAKREGAVDKRRTISTARAGLDA 373
Query: 1340 KLSQT-KAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGA 1398
+ AA S E ++ N + E + + + + +
Sbjct: 374 LVKGLGGAAPESAEELLELNNAARLTVDE----YPAAREALESAGQRNVEDRTRAVDEFK 429
Query: 1399 RLDAEKRALQDELSRTEARVTKL 1421
D E +L S E R+ ++
Sbjct: 430 AADQELSSLSKGSSNIEYRLLQV 452
Score = 32.3 bits (73), Expect = 3.4
Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 19/203 (9%)
Query: 554 NKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYE---------------ITIE 598
N +++TL ++ + M +++ + + + + + +
Sbjct: 614 NDAKVETLRETVKAMLSREDFYMIKIMRQQGEYIKLQEQANALAHIQALNFASIDLPSAQ 673
Query: 599 ANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKG 658
ELQ E+L +SD +A L Q+ + + + +Q E L +
Sbjct: 674 RQIAELQARLERLTHTQSDIAIAKAALDAAQTRQKVLERQYQQEVTECAGLKKDLKRAAM 733
Query: 659 QVVRLNKELED--TEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLTEEKIN 716
+++ + T A Q A D + + ++
Sbjct: 734 LSRKVHSIAKQGMTGALQALGAAHFPQVAPEQHDD--IVDIERIEHRRQLQKRIDAVNAR 791
Query: 717 LKKQNEECVTKLTEEKEQVRAAL 739
L++ EE + ++++ K++ AAL
Sbjct: 792 LRRLREEIIGRMSDAKKEDTAAL 814
>gnl|CDD|223266 COG0188, GyrA, Type IIA topoisomerase (DNA gyrase/topo II,
topoisomerase IV), A subunit [DNA replication,
recombination, and repair].
Length = 804
Score = 33.8 bits (78), Expect = 1.1
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 1652 EITKLCRERSELRNKLENLHDKIQMLRDQLNSEIKRRQLYIYRDTRAGKEMQQLRQALGD 1711
+T L E ++ +L+ L +I L L SE + + KE+ ++++ GD
Sbjct: 430 RLTGL--EEEKIEKELKELEKEIADLEKILASEERLLDIIK-------KELLEIKKKFGD 480
Query: 1712 SLRT 1715
RT
Sbjct: 481 ERRT 484
>gnl|CDD|217817 pfam03961, DUF342, Protein of unknown function (DUF342). This
family of bacterial proteins has no known function. The
proteins are in the region of 500-600 amino acid
residues in length.
Length = 450
Score = 33.4 bits (77), Expect = 1.2
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 800 DQKAIQDRLSQVLKELEEEKCTLDRIK--------RESAGRSEQDRNTINTLREQLNRTV 851
D +++ L ++ +EL+E + L++IK + + R + L E +
Sbjct: 328 DFPELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLETKEKLS 387
Query: 852 AKLEELKTRTEEEKAILERKISDLKSE 878
+LEEL EEE L+ ++ L SE
Sbjct: 388 EELEEL----EEELKELKEELESLYSE 410
Score = 31.1 bits (71), Expect = 5.6
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 1287 QIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMR-ALQEEKYALETKLSQTK 1345
++ + +LK + L+ E+K+L + + + + + R L EK KL +TK
Sbjct: 324 EVGVDFPELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLETK 383
Query: 1346 AAANSQSEAMDQKNEELQH 1364
+ + E ++++ +EL+
Sbjct: 384 EKLSEELEELEEELKELKE 402
Score = 31.1 bits (71), Expect = 6.5
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 691 DYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQI 750
+ + ++ L+++ +E +L + K LKK ++ +L EK + L + +++
Sbjct: 331 ELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLETKEKLSEEL 390
Query: 751 TEEKDCELSRLQANLCQLQSHIDKICQQH 779
E ++ EL L+ L L S +
Sbjct: 391 EELEE-ELKELKEELESLYSEGKISVNKT 418
Score = 30.7 bits (70), Expect = 8.0
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 449 NIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLF-LQNELD 507
+ L+ E LE+ +E+ E +E + L K+ K + Q EKL + +L
Sbjct: 328 DFPELKEELKELEEELKELEEELEKIKKLLKKLPKKARGQLPPEKREQLEKLLETKEKLS 387
Query: 508 RINSDMDAREVELRGKEDMNRRLREDLLIANE 539
+++ EL KE++ E + N+
Sbjct: 388 EELEELEEELKEL--KEELESLYSEGKISVNK 417
>gnl|CDD|237875 PRK14974, PRK14974, cell division protein FtsY; Provisional.
Length = 336
Score = 33.0 bits (76), Expect = 1.5
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 843 LREQLNRTVAKLEE-LKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVD 901
L+E+L++ V K+EE ++ EEE E + + E + + + E ++
Sbjct: 5 LKEKLSKFVEKVEEKIEEEEEEEAPEAEEEEEEEDEEEKKEKPGFFDKAKITEIKEKDIE 64
Query: 902 TV----QAQLLETARRLKEAENVGESLRKDLLDTK 932
+ + +LLE+ L+ AE + ESL++ L+ K
Sbjct: 65 DLLEELELELLESDVALEVAEEILESLKEKLVGKK 99
>gnl|CDD|221143 pfam11593, Med3, Mediator complex subunit 3 fungal. Mediator is a
large complex of up to 33 proteins that is conserved
from plants to fungi to humans - the number and
representation of individual subunits varying with
species. It is arranged into four different sections, a
core, a head, a tail and a kinase-activity part, and the
number of subunits within each of these is what varies
with species. Overall, Mediator regulates the
transcriptional activity of RNA polymerase II but it
would appear that each of the four different sections
has a slightly different function. Mediator subunit
Hrs1/Med3 is a physical target for Cyc8-Tup1, a yeast
transcriptional co-repressor.
Length = 381
Score = 33.1 bits (75), Expect = 1.5
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 812 LKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLN---RTVAKLEELKTRTEEEKAIL 868
L EL+E + K E A + ++ ++ I LR Q N R ++ +EE+ +T +EK +L
Sbjct: 10 LDELQELLAETEGTKDEVADKIKEAKDAILPLRLQFNEFIRIISHIEEMGNKTSQEKFLL 69
Query: 869 ER-KISDLKSEREALVTESEELK 890
R K+ +L + + L + ++L+
Sbjct: 70 IRSKLLELYNNIQKLSKDFQQLQ 92
>gnl|CDD|235570 PRK05703, flhF, flagellar biosynthesis regulator FlhF; Validated.
Length = 424
Score = 32.9 bits (76), Expect = 1.5
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 15/147 (10%)
Query: 482 QKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDL 541
++ + +K SLQ+ + + ++ + A K+++ +
Sbjct: 64 REEKRKPAKSILSLQALLEKRPSRTNSQDALLQAENALPEWKKELEKPSEPKEEEPKAAA 123
Query: 542 KNAKLAKELLEQNKE--EMQTLLAHIEKSKGDVE------AEMERLLLDRSDMNE----Q 589
++ + KEL E E E++ LL VE AE+ + L RS ++ +
Sbjct: 124 ESKVVQKELDELRDELKELKNLLEDQLSGLRQVERIPPEFAELYKRLK-RSGLSPEIAEK 182
Query: 590 ISKY--EITIEANDKELQRLQEQLASL 614
+ K E + L E LA++
Sbjct: 183 LLKLLLEHMPPRERTAWRYLLELLANM 209
Score = 32.6 bits (75), Expect = 1.8
Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Query: 1582 ESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQNELEVKEVARAGLESQLRM----- 1636
K ++ R + +L+ L + + NSQ+ L E A + +L
Sbjct: 56 TPKKNPVLREEKRKPAKSILSLQALLEKRPSRTNSQDALLQAENALPEWKKELEKPSEPK 115
Query: 1637 SQWPSESPMNGGDSEEITKLCRERSELRNKLENLHDKIQML--RDQLNSEIKRR 1688
+ P + + +E+ +L E EL+N LE+ ++ + +E+ +R
Sbjct: 116 EEEPKAAAESKVVQKELDELRDELKELKNLLEDQLSGLRQVERIPPEFAELYKR 169
>gnl|CDD|215969 pfam00521, DNA_topoisoIV, DNA gyrase/topoisomerase IV, subunit A.
Length = 427
Score = 32.9 bits (76), Expect = 1.6
Identities = 24/107 (22%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 636 DVKKEQLEHEVQELLVKQESLKGQVVRLNK-----ELEDTEKRAQETKASLVQQASGLDA 690
+V K + E+ +++L + L+G + LNK E+ ++ K L+++ S + A
Sbjct: 319 EVYKRRKEYLLEKLEERLHILEGLLKALNKIDFVIEVIRGSIDLKKAKKELIEELSEIQA 378
Query: 691 DYQNQISNLKKQN--EECVTKLTEEKINLKKQNEECVTKLTEEKEQV 735
DY + +++ + +E + KL +E L+K+ E + K+ ++++
Sbjct: 379 DY---LLDMRLRRLTKEEIEKLEKEIEELEKEIAE-LEKILASEKKL 421
>gnl|CDD|213754 TIGR02971, heterocyst_DevB, ABC exporter membrane fusion protein,
DevB family. Members of this protein family are found
mostly in the Cyanobacteria, but also in the
Planctomycetes. DevB from Anabaena sp. strain PCC 7120
is partially characterized as a membrane fusion protein
of the DevBCA ABC exporter, probably a glycolipid
exporter, required for heterocyst formation. Most
Cyanobacteria have one member only, but Nostoc sp. PCC
7120 has seven members.
Length = 327
Score = 32.9 bits (75), Expect = 1.7
Identities = 30/155 (19%), Positives = 57/155 (36%), Gaps = 18/155 (11%)
Query: 782 ALLRAEGDKQQALLIAQQDQKAIQDRLSQV---LKELEEEKCTLDRIKRESAGRSEQDRN 838
A L + ++ L +A+ + RL+QV K+ E R + +
Sbjct: 45 AELDSRPERTAELDVARTQLDEAKARLAQVRAGAKKGEIAAQRAARAAAKLFKDVAAQQA 104
Query: 839 TINTLREQLN---RTVAKLEELKTRTEEEKAILERKISDLKSEREAL-------VTESEE 888
T+N L +L R V + L + L+ K L++ E L + +
Sbjct: 105 TLNRLEAELETAQREVDRYRSLFRDGAVSASDLDSKALKLRTAEEELEEALASRSEQIDG 164
Query: 889 LKVQLHLSEDK-----VDTVQAQLLETARRLKEAE 918
+ L ++ VD QA++ +++AE
Sbjct: 165 ARAALASLAEEVRETDVDLAQAEVKSALEAVQQAE 199
>gnl|CDD|163426 TIGR03714, secA2, accessory Sec system translocase SecA2. Members
of this protein family are homologous to SecA and part
of the accessory Sec system. This system, including both
five core proteins for export and a variable number of
proteins for glycosylation, operates in certain
Gram-positive pathogens for the maturation and delivery
of serine-rich glycoproteins such as the cell surface
glycoprotein GspB in Streptococcus gordonii [Protein
fate, Protein and peptide secretion and trafficking].
Length = 762
Score = 33.1 bits (76), Expect = 1.9
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 454 RVEKSALEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSD- 512
R + E + + NE ESL+ + + +RL + ++ FL +++D+I D
Sbjct: 582 RASEDKGESAREQTNEFEESLSIQRENIYAERNRLIEGSD-------FLDDDVDQIIDDV 634
Query: 513 --MDAREVELRGKEDMNRRLREDL------LIANEDLKNAKLAKELLEQ 553
M A E +L K + R + E+L DLKN + K+ L++
Sbjct: 635 FNMYAEEQDLSNKSLLKRFILENLSYQFKNDPDEFDLKNKEAIKDFLKE 683
>gnl|CDD|213755 TIGR02977, phageshock_pspA, phage shock protein A. Members of this
family are the phage shock protein PspA, from the phage
shock operon. This is a narrower family than the set of
PspA and its homologs, sometimes several in a genome, as
described by pfam04012. PspA appears to maintain the
protonmotive force under stress conditions that include
overexpression of certain phage secretins, heat shock,
ethanol, and protein export defects [Cellular processes,
Adaptations to atypical conditions].
Length = 219
Score = 32.3 bits (74), Expect = 1.9
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 842 TLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALV----TESEELKVQLHLSE 897
L E L R +A +EE + +E+ A L+ K+++ ++ ++AL S L V+ L
Sbjct: 99 ELAEALERELAAVEETLAKLQEDIAKLQAKLAEARARQKALAIRHQAASSRLDVRRQLDS 158
Query: 898 DKVDTVQAQLLETARRLKEAENVGES 923
+ D A+ + RR+ E E ES
Sbjct: 159 GRSDEAMARFEQYERRVDELEAQAES 184
>gnl|CDD|215665 pfam00028, Cadherin, Cadherin domain.
Length = 92
Score = 30.3 bits (69), Expect = 2.0
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 11/60 (18%)
Query: 543 NAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDK 602
N ++ +L I+ GD+ LDR E I +YE+T+ A D
Sbjct: 28 NGRIFYSILGGGPGGW----FRIDPDTGDLSTTKP---LDR----ESIGEYELTVLATDS 76
>gnl|CDD|182611 PRK10642, PRK10642, proline/glycine betaine transporter;
Provisional.
Length = 490
Score = 32.8 bits (75), Expect = 2.1
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 523 KEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLD 582
KE NR L+ A+ + + AKE+L ++ + +IE+ D++ E+ L
Sbjct: 430 KETANRPLKGATPAAS----DIQEAKEILVEHYD-------NIEQKIDDIDQEIAELQAK 478
Query: 583 RSDMNEQ 589
R+ + +Q
Sbjct: 479 RTRLVQQ 485
>gnl|CDD|223250 COG0172, SerS, Seryl-tRNA synthetase [Translation, ribosomal
structure and biogenesis].
Length = 429
Score = 32.6 bits (75), Expect = 2.1
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 23/119 (19%)
Query: 1270 DPEIVRKGVRN------LMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQA 1323
+P+ VR+ ++ + ++ +++ ER L + L+ E +LS
Sbjct: 10 NPDAVREKLKKRGGDALDVDKLLELDEERRKLLRELEELQAERNELS------------- 56
Query: 1324 QQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEE 1382
+ + E + A E + + L L ++ TL LT+ N+ E
Sbjct: 57 ----KEIGRALKRGEDDAEELIAEVKELKEKLKELEAALDELEAELDTLLLTIPNIPHE 111
Score = 30.6 bits (70), Expect = 8.8
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 274 KLVKENSELKSQVTVLKSENNAMANE----SKQKEERVEELLKRIHTLEARVEEADQNV- 328
+L +E +L ++ L++E N ++ E K+ E+ EEL+ + L+ +++E + +
Sbjct: 33 ELDEERRKLLRELEELQAERNELSKEIGRALKRGEDDAEELIAEVKELKEKLKELEAALD 92
Query: 329 LLVEEMQQELELLQNT 344
L E+ L + N
Sbjct: 93 ELEAELDTLLLTIPNI 108
>gnl|CDD|225385 COG2829, PldA, Outer membrane phospholipase A [Cell envelope
biogenesis, outer membrane].
Length = 317
Score = 32.4 bits (74), Expect = 2.2
Identities = 11/74 (14%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Query: 1282 MQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRALQEEKYALETKL 1341
M+Q + + DL M A + +K++ + +A Q Y +T
Sbjct: 11 MRQQLEGLKAVLDLPKMVYAKELTLKEVHVIPAVRGSIIANMLQEQDNPF-TPYPYDTDY 69
Query: 1342 SQTKAAANSQSEAM 1355
+
Sbjct: 70 LILTLTNYLGKYLI 83
>gnl|CDD|106966 PHA00657, PHA00657, crystallin beta/gamma motif-containing protein.
Length = 2052
Score = 32.8 bits (74), Expect = 2.3
Identities = 38/187 (20%), Positives = 78/187 (41%), Gaps = 21/187 (11%)
Query: 652 KQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEECVTKLT 711
+ + ++ Q R + +D +R G+D DY +QI+NL
Sbjct: 1239 RNQLIQHQAARAAYDAQDEVERGLRYLGKFAGDIKGIDVDYADQIANLL----------- 1287
Query: 712 EEKINLKK-QNEECVTKLTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQANLCQLQS 770
E+ +L+K Q+ + V K T + +R+ E + E + S + + +
Sbjct: 1288 -ERFDLRKGQSLKAVDKRTALADWLRSQREAGFEPDIPAELENEAYRTSYKNMTVEEFRG 1346
Query: 771 HIDKICQQHEDALLRAEGDKQQALLIA--QQDQKAIQDRLSQVLKELEEEKCTLDRIKRE 828
+D + Q + G ++ LL A Q+D +A++D ++ ++ + + R
Sbjct: 1347 LVDSVRQ------IEHLGRLKRKLLTAADQRDYEAVRDEIAGSIRAHAQGRSADTRTPTT 1400
Query: 829 SAGRSEQ 835
+AGR+ Q
Sbjct: 1401 NAGRAVQ 1407
>gnl|CDD|130673 TIGR01612, 235kDa-fam, reticulocyte binding/rhoptry protein. This
model represents a group of paralogous families in
plasmodium species alternately annotated as reticulocyte
binding protein, 235-kDa family protein and rhoptry
protein. Rhoptry protein is localized on the cell surface
and is extremely large (although apparently lacking in
repeat structure) and is important for the process of
invasion of the RBCs by the parasite. These proteins are
found in P. falciparum, P. vivax and P. yoelii.
Length = 2757
Score = 32.7 bits (74), Expect = 2.8
Identities = 143/774 (18%), Positives = 324/774 (41%), Gaps = 89/774 (11%)
Query: 403 TMKKQYESADESQYNMSQQVTSLTSQLDQTKAQLAQVGREKEALVKNIEMLRVEKS---A 459
T K + E +D+ + ++ S +++ + + + L K E +++ ++ +
Sbjct: 873 TNKIKAEISDDKLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKVDEYIKICENTKES 932
Query: 460 LEKNKREINEMVESLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVE 519
+EK + N + E LN N+D ++++N + + + NELD+ D + E
Sbjct: 933 IEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKDASLNDYE 992
Query: 520 LRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEM-QTLLAHIEKSKGDVEAEMER 578
+ NE +K K L +NKE M EK+ D+E ++E
Sbjct: 993 AKN---------------NELIKYFNDLKANLGKNKENMLYHQFDEKEKATNDIEQKIE- 1036
Query: 579 LLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEA-ILFDTQSHLEQSDV 637
D N+ I EI I + + E+ + + E L IL + + ++ +
Sbjct: 1037 ------DANKNIPNIEIAIHTSIYNIIDEIEKE--IGKNIELLNKEILEEAEINITNFNE 1088
Query: 638 KKEQLEHEVQELLVKQESLK--GQVVRLNKELEDTEKRAQETKASLVQ---QASGLDADY 692
KE+L+H + K+E++K ++ ++ ++++ +++ +L + ++ +
Sbjct: 1089 IKEKLKHYNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEI 1148
Query: 693 QNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKKLHATVKQITE 752
+ QI++L+ ++ ++ E+I K +N VTK+ ++K KKL + +I +
Sbjct: 1149 KAQINDLEDVADKAISNDDPEEIEKKIEN--IVTKIDKKKNIYDEI--KKLLNEIAEIEK 1204
Query: 753 EKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVL 812
+K NL ++ ++ ++ E K + ++ A + D + +
Sbjct: 1205 DKTSLEEVKGINLSYGKNLGKLFLEKIDE-----EKKKSEHMIKAMEAYIEDLDEIKEKS 1259
Query: 813 KELEEEKCTLDRIKRE--SAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILER 870
E+E E IK E + S D + + ++ + ++ + E + E+ + E
Sbjct: 1260 PEIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIREKSLKIIEDFS-EES 1318
Query: 871 KISDLKSEREALVTESEE--LKVQLHLSE----------DKVDTVQAQLLETARRLKE-A 917
I+D+K E + + ++++ + L+L+E +K+ + ++ E + ++E
Sbjct: 1319 DINDIKKELQKNLLDAQKHNSDINLYLNEIANIYNILKLNKIKKIIDEVKEYTKEIEENN 1378
Query: 918 ENVGESLRKDLLDTKTHLADSNFE----KDKYAKSNKDLREMVKKV----------ESEK 963
+N+ + L K K D N E K + +KD+ E +KK+ ES
Sbjct: 1379 KNIKDELDKSEKLIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNI 1438
Query: 964 RDQARTIDEGLQKIAVRFGDDE------KQALRNQLNDQSND----VASLKKELLQAEQI 1013
+ DE + + + F + E + L+ + ++ +ND + LK+ + +++
Sbjct: 1439 DTYFKNADENNENVLLLFKNIEMADNKSQHILKIKKDNATNDHDFNINELKEHIDKSKGC 1498
Query: 1014 RLDLD-SEKVTLQEKCKFLEIEKEKYNFVISYLLC-----LFQVEVELSQVTKDRSDLSH 1067
+ + D + K + K F + +K+ + Y + + + + K+ D
Sbjct: 1499 KDEADKNAKAIEKNKELFEQYKKDVTELLNKYSALAIKNKFAKTKKDSEIIIKEIKDAHK 1558
Query: 1068 QLSLLQRKKENVVEDLARLKQKYEQSVEMNNRVNKNLEDLVKECEEKEVVLLDL 1121
+ L K E ++++ + K + E N++ NK D+ E E L +
Sbjct: 1559 KFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFLKI 1612
>gnl|CDD|218681 pfam05667, DUF812, Protein of unknown function (DUF812). This
family consists of several eukaryotic proteins of
unknown function.
Length = 536
Score = 32.0 bits (73), Expect = 2.9
Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 23/171 (13%)
Query: 796 IAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLE 855
+ + +DR + ELE + +D ++ + + + +Q+N + +
Sbjct: 253 VPPAEMDTEEDRTKEREAELEALQEQIDELESSIEEVLSE-IKALASKIKQVNEELTTVR 311
Query: 856 ELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETARRLK 915
+ EEE I +R + L +E+ V +QA ++ ++ RL
Sbjct: 312 QENEELEEEYKIKKRTVELLPD------------------AENNVAKLQALVVASSERLL 353
Query: 916 EAENVGESLRKDLLDTKTHLADSNFEKDKYAKSN----KDLREMVKKVESE 962
E E+ R L+D L + N K+ + K LR ++++ESE
Sbjct: 354 ELAQQWEAHRTPLIDEYRSLKEKNRNKEDETQRQLDEIKKLRNKIEELESE 404
Score = 30.9 bits (70), Expect = 7.2
Identities = 38/193 (19%), Positives = 81/193 (41%), Gaps = 12/193 (6%)
Query: 552 EQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQRLQEQL 611
E E +Q + +E S +V +E++ L +NE+++ E ++E +++++
Sbjct: 269 EAELEALQEQIDELESSIEEVLSEIKALASKIKQVNEELTTVRQENEELEEEY-KIKKRT 327
Query: 612 ASLRSDKES----LEAILFDTQSHLE----QSDVKKEQLEHEVQELLVKQESLKGQVVRL 663
L D E+ L+A++ + L Q + + L E + L K + + + R
Sbjct: 328 VELLPDAENNVAKLQALVVASSERLLELAQQWEAHRTPLIDEYRSLKEKNRNKEDETQRQ 387
Query: 664 NKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQ--NEECVTKLTEEKINLKKQN 721
E++ + +E S +Q L ++ N K ++ E N+KKQ
Sbjct: 388 LDEIKKLRNKIEEL-ESELQTKEQLYKQLLDEYENAPKSVSRSAYTRRILEIIKNIKKQK 446
Query: 722 EECVTKLTEEKEQ 734
E+ L++ +
Sbjct: 447 EDIDKILSDTRSL 459
>gnl|CDD|218434 pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1
mutation causes misplacement of the septum during cell
division, resulting in the formation of small, circular,
anucleate mini-cells. Inactivation of divIVA produces a
mini-cell phenotype, whereas overproduction of DivIVA
results in a filamentation phenotype. These proteins
appear to contain coiled-coils.
Length = 131
Score = 30.7 bits (70), Expect = 2.9
Identities = 19/104 (18%), Positives = 42/104 (40%), Gaps = 9/104 (8%)
Query: 1270 DPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQTMRA 1329
DP+ V + + +++ + +E ++LK + L+ ++++ + + AQ+T
Sbjct: 19 DPDEVDEFLDQVIKDYEALYKENEELKEEIERLEEKLEEYKELEETLQKTLVVAQET--- 75
Query: 1330 LQEEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLE 1373
A E K + K A EA + + E+ L
Sbjct: 76 ------AEEVKANAQKEAELIIKEAEAKAERIVNDANEEAKKLA 113
>gnl|CDD|179156 PRK00888, ftsB, cell division protein FtsB; Reviewed.
Length = 105
Score = 29.9 bits (68), Expect = 3.1
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 1278 VRNLMQQVAQIERERDDLKAMTQALKREIKDLSD 1311
+ QVA ++ LKA L EI DL
Sbjct: 29 YWRVNDQVAAQQQTNAKLKARNDQLFAEIDDLKG 62
>gnl|CDD|219791 pfam08317, Spc7, Spc7 kinetochore protein. This domain is found in
cell division proteins which are required for
kinetochore-spindle association.
Length = 321
Score = 31.9 bits (73), Expect = 3.1
Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 502 LQNELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA--KLAKELLEQNKEEMQ 559
L+ L+ M E L +D+N L + A + L + E
Sbjct: 148 LKEGLEENLEGMKRDEELLN--KDLN--LINSIKPKLRKKLQALKEEIASLRQLADELNL 203
Query: 560 TLLAHIEKSKGDVEAEMERLLLDRSDMNE---QISKYEITIEANDKELQRLQEQLASLRS 616
+EK++ ++ + ++ R + E ++ + I IEA + L E++A
Sbjct: 204 CDPLELEKARQELRSLSVKISEKRKQLEELQQELQELTIAIEALTNKKSELLEEIAEAEK 263
Query: 617 DKE 619
+E
Sbjct: 264 IRE 266
>gnl|CDD|223815 COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding
protein) [Cell envelope biogenesis, outer membrane].
Length = 661
Score = 31.9 bits (73), Expect = 3.2
Identities = 26/123 (21%), Positives = 37/123 (30%), Gaps = 30/123 (24%)
Query: 63 SQQQQAALVSKLQAKLLQYKQRCKELELEREAPSTSSYLGPLPSTPLPSALDAAQAHLRE 122
+ Q A L L+A PS Y P P A LR
Sbjct: 203 TLAQAALLAGLLKA------------------PSL--YN---PYRPPEYARARRNLVLRR 239
Query: 123 MRE-------ERIQDLNTALRRLDDERRENEKLRKMNSVYKEQLDEAHHTNEALTNDLEK 175
M E E L L+ + + V +++L E ++ LT L+
Sbjct: 240 MVEQGYITAEEYDAALAEPLQVQQAKTVATSPPPYFDDVVRQELAELLGESDLLTGGLKV 299
Query: 176 LTT 178
TT
Sbjct: 300 YTT 302
>gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA;
Provisional.
Length = 569
Score = 32.1 bits (74), Expect = 3.4
Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 802 KAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRT 861
+ +++++ + L LEE LD + ++ E+ I+ L + L R V + +
Sbjct: 259 QDLKEQIDENLALLEELD--LDEAEEKNEEIQER----IDQLYDILEREV----KARKYV 308
Query: 862 EEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQ----------AQLLETA 911
E+ L + K + + L E + +K L+E ++++V+ Q E
Sbjct: 309 EKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQLEKQLESLEKQYDEIT 368
Query: 912 RRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQA 967
R+ E E L+++L + L + E++K ++ + LR K E E R++
Sbjct: 369 ERIAEQEIAYSELQEELEEILKQLEEIEKEQEKLSEMLQGLR----KDELEAREKL 420
>gnl|CDD|220173 pfam09311, Rab5-bind, Rabaptin-like protein. Members of this
family are predominantly found in Rabaptin and allow for
binding to the GTPase Rab5. This interaction is
necessary and sufficient for Rab5-dependent recruitment
of Rabaptin5 to early endosomal membranes.
Length = 180
Score = 31.2 bits (71), Expect = 3.4
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 601 DKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQV 660
+ Q+L+ QL L+ + + L L TQ L+ S+ + QL EV+ L + ++
Sbjct: 21 EASRQKLRAQLRRLQQENQWLRGELALTQQELQASEQEVIQLPEEVKHLQFLCLQRREEL 80
Query: 661 VRLNKELEDTEKRAQETKASLVQQASGLDADYQNQISNLKKQNEE 705
+ E E+ + L + L+ + +I + Q+E+
Sbjct: 81 IESRTASEHLEEELKSEIDPLKELKPNLEEELAAEIELPQIQSEK 125
>gnl|CDD|233791 TIGR02231, TIGR02231, conserved hypothetical protein. This family
consists of proteins over 500 amino acids long in
Caenorhabditis elegans and several bacteria (Pseudomonas
aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans,
etc.). The function is unknown.
Length = 525
Score = 32.0 bits (73), Expect = 3.6
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 26/190 (13%)
Query: 712 EEKINLKKQNEECVTK---LTEEKEQVRAALEKKLHATVKQITEEKDCELSRLQAN--LC 766
K++L E V K LT + + +R + E A +T E + L
Sbjct: 17 SGKVDLPSGVNELVLKNLPLTLQDDSLRVSGEGL--AVASLVTVSTWRERTSRPDPERLA 74
Query: 767 QLQSHIDKICQQHEDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIK 826
+L+ I ++ + D R + K A + I++ L++ +K D K
Sbjct: 75 ELRKQIRELEAELRDLEDRGDALKALAKFLED-----IREGLTEPIK---------DSAK 120
Query: 827 RESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTES 886
R E + ++ R + + E + R E LE+++S+L++E AL+T
Sbjct: 121 RNEPDLKEW-FQAFDFNGSEIERLLTEDREAERRIRE----LEKQLSELQNELNALLTGK 175
Query: 887 EELKVQLHLS 896
+ + +
Sbjct: 176 SQRSHTVLVR 185
>gnl|CDD|198374 cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like
D-xylulose kinases; a subgroup of the FGGY family of
carbohydrate kinases. This subgroup is predominantly
composed of bacterial D-xylulose kinases (XK, also known
as xylulokinase; EC 2.7.1.17), which catalyze the
rate-limiting step in the ATP-dependent phosphorylation
of D-xylulose to produce D-xylulose 5-phosphate (X5P) and
ADP. D-xylulose has been used as a source of carbon and
energy by a variety of microorganisms. Some
uncharacterized sequences are also included in this
subgroup. The prototypical member of this CD is
Escherichia coli xylulokinase (EcXK), which exists as a
dimer. Each monomer consists of two large domains
separated by an open cleft that forms an active site.
This model includes both the N-terminal domain, which
adopts a ribonuclease H-like fold, and the structurally
related C-terminal domain. The presence of Mg2+ or Mn2+
is required for catalytic activity. Members of this
subgroup belong to the FGGY family of carbohydrate
kinases.
Length = 482
Score = 31.7 bits (73), Expect = 3.6
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 1695 DTRAGKEMQQLRQALGDSLRTVAHDPAV 1722
D R E +++ + +G L + +PA+
Sbjct: 100 DQRTTAECEEITERVGGELIEITGNPAL 127
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase. The valyl-tRNA synthetase
(ValS) is a class I amino acyl-tRNA ligase and is
particularly closely related to the isoleucyl tRNA
synthetase [Protein synthesis, tRNA aminoacylation].
Length = 861
Score = 32.0 bits (73), Expect = 3.9
Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 17/109 (15%)
Query: 528 RRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKG-----------DVEAEM 576
R L+ + I NA L L+ E + L + KG +
Sbjct: 737 RNLKAESNIP----PNAPLKVLLIYTEAETAERLKLNAVDIKGAINFSEVEVVIEKPEVT 792
Query: 577 ERLLLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAIL 625
E ++ I + KEL RLQ+QL + + +E L
Sbjct: 793 EAVVELVPGFEIIIPVKGL--INKAKELARLQKQLDKEKKEVIRIEGKL 839
>gnl|CDD|217458 pfam03256, APC10, Anaphase-promoting complex, subunit 10 (APC10).
Length = 175
Score = 30.9 bits (70), Expect = 3.9
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 10/73 (13%)
Query: 1202 SDLERYRAAQLHAES------LLEAREKSHR---QQVNRLENQLDGRASHAGG-KMTSPS 1251
+DL+ + ++ + L + REK R Q+ L N +GR +H ++ P
Sbjct: 103 NDLQEVKTLEVGEPTGWVHIPLRDGREKPLRTFMLQIAVLANHQNGRDTHVRQIRIYGPV 162
Query: 1252 RRYSPVRGGEGGE 1264
YS V
Sbjct: 163 IEYSEVPHQLFHG 175
>gnl|CDD|236598 PRK09631, PRK09631, DNA topoisomerase IV subunit A; Provisional.
Length = 635
Score = 31.6 bits (72), Expect = 4.1
Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 473 SLNSNLDKVQKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVEL---RGKEDMNRR 529
S++ NL ++ + + + ++ LQ L E+EL + E + +
Sbjct: 291 SISVNLLVIKDRYPVIYTVTDIIKFHAEHLQKVLKM--------ELELERAKLLEKIFAK 342
Query: 530 LREDLLIANEDLKNAKLAKELLEQNKEE--MQTLLAHIEKSKGD-----VEAEMERLLLD 582
E + I ++ K + + EE + +L+ ++ K + E ++E LL
Sbjct: 343 TLEQIFIEE------RIYKRIETISSEEDVISIVLSELKPFKEELSRDVTEEDIENLLKI 396
Query: 583 RSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEA 623
+IS ++I + N KE++ L ++L S+ + +S++
Sbjct: 397 PI---RRISLFDI--DKNQKEIRILNKELKSVEKNLKSIKG 432
>gnl|CDD|218602 pfam05478, Prominin, Prominin. The prominins are an emerging
family of proteins that among the multispan membrane
proteins display a novel topology. Mouse prominin and
human prominin (mouse)-like 1 (PROML1) are predicted to
contain five membrane spanning domains, with an
N-terminal domain exposed to the extracellular space
followed by four, alternating small cytoplasmic and
large extracellular, loops and a cytoplasmic C-terminal
domain. The exact function of prominin is unknown
although in humans defects in PROM1, the gene coding for
prominin, cause retinal degeneration.
Length = 807
Score = 31.9 bits (73), Expect = 4.1
Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 53/166 (31%)
Query: 465 REINEMVESLNSNLDKVQ------------KNNSRLSKINESL---QSEKLFLQNELDRI 509
EI++ +ESL NL + +S L IN S Q +K + L+
Sbjct: 569 PEIDQELESLKVNLSTITLLTPEARRNLEDLASSGLDDINFSNFLKQIQKPLTEVNLNSF 628
Query: 510 NSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKEL---------LEQNKEE-MQ 559
++DA +AN +L N KL L ++QN M+
Sbjct: 629 AEELDA--------------------LAN-NLPNGKLKVALKNEALDLRSIQQNFVPPME 667
Query: 560 TLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQ 605
+LL + + ++ +D+ + ++A L
Sbjct: 668 SLLEKLNSNVKTLDES-------SNDLQNAVKDVLAEVQAAQGFLN 706
>gnl|CDD|220716 pfam10359, Fmp27_WPPW, RNA pol II promoter Fmp27 protein domain.
Fmp27_WPPW is a conserved domain of a family of proteins
involved in RNA polymerase II transcription initiation.
It contains characteristic HQR and WPPW sequence motifs.
and is towards the C-terminal in members which contain
Fmp27_SW pfam10305.
Length = 470
Score = 31.5 bits (72), Expect = 4.2
Identities = 16/84 (19%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 804 IQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKTRTEE 863
+++RL Q+ +++++ + LD ++ +E+ ++ + L E+L+ +LE L+ E+
Sbjct: 166 LEERLKQLEEQIKKLEEKLDDLE---LNDTEELQSDLEELEEELSVLKERLEFLEKLLED 222
Query: 864 EKAILERKISDLKSEREALVTESE 887
+ E ++ E+ + +S
Sbjct: 223 LERSEESSDRSSSTDTESSIADSL 246
>gnl|CDD|129310 TIGR00206, fliF, flagellar basal-body M-ring protein/flagellar
hook-basal body protein (fliF). Component of the M
(cytoplasmic associated) ring, one of four rings
(L,P,S,M) which make up the flagellar hook-basal body
which is a major portion of the flagellar organelle.
Although the basic structure of the flagella appears to
be similar for all bacteria, additional rings and
structures surrounding the basal body have been observed
for some bacteria (eg Vibrio cholerae and Treponema
pallidum) [Cellular processes, Chemotaxis and motility].
Length = 555
Score = 31.4 bits (71), Expect = 4.6
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 8/154 (5%)
Query: 581 LDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAI-LFDTQ----SHLEQS 635
LD+ ++ +S I + +++ L+ LA K + LFD + E+S
Sbjct: 70 LDQENVPYFLSSDGRIILVPEDKVKELRAILAREGLPKTGMVGFELFDQDRFGITDFERS 129
Query: 636 DVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQET-KASL-VQQASGLDADYQ 693
+ +E E+ + + +K V L + QE AS+ + G D D
Sbjct: 130 INLRRAIEGELSRTIEALDPVKAASVHLAMPKDALFVEEQEPPSASVRLTLRPGSDLD-T 188
Query: 694 NQISNLKKQNEECVTKLTEEKINLKKQNEECVTK 727
NQI L V L + I + QN +
Sbjct: 189 NQIEGLVHLISYAVPGLESDNIAIVDQNGTILND 222
>gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A
(vWA) domain [General function prediction only].
Length = 4600
Score = 31.9 bits (72), Expect = 4.7
Identities = 75/486 (15%), Positives = 176/486 (36%), Gaps = 65/486 (13%)
Query: 466 EINEMVESLNSNLDKV--QKNNSRLSKINESLQSEKLFLQNELDRINSDMDAREVELRGK 523
E+N++ E L+++L++ + N E +E+ NE D ++ + D + +E + +
Sbjct: 3891 EVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDR 3950
Query: 524 EDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDR 583
++ + +D + +E Q E + L D+ ++ +
Sbjct: 3951 QEKEDEEEMSDDVGIDDEIQPDI-QENNSQPPPENEDL---------DLPEDL------K 3994
Query: 584 SDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLE 643
D E + +E D E ++ A D+ + + + L++ + + +
Sbjct: 3995 LDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDEDPLEENNTLDEDIQQDDFSD 4054
Query: 644 HEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASLVQQASGLD----ADYQNQISNL 699
+ + ++ + V + ED K +E + V + +D D ++ ++
Sbjct: 4055 LAEDDEKMNEDGFEENVQENEESTEDGVKSDEELEQGEVPEDQAIDNHPKMDAKSTFASA 4114
Query: 700 KKQNEECVTKLTEEKINLKKQN---------------EECVTKLTEEKEQVRAALEK--- 741
+ E + E L +++ +E + E + +
Sbjct: 4115 EADEENTDKGIVGENEELGEEDGVRGNGTADGEFEQVQEDTSTPKEAMSEADRQYQSLGD 4174
Query: 742 --KLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQALLIAQQ 799
+ +I E +D S+ QA H+ + ++ AL AE D+ +++ +
Sbjct: 4175 HLREWQQANRIHEWEDLTESQSQAFDDSEFMHVKEDEEEDLQALGNAEKDQIKSI---DR 4231
Query: 800 DQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTINTLREQLNRTVAKLEELKT 859
D+ A Q+ S + E++ E + QD I+ +++ T+ E +
Sbjct: 4232 DESANQNPDSMNSTNIAEDE------ADEVGDKQLQDGQDISDIKQTGEDTLPT--EFGS 4283
Query: 860 RTEEEKAILERKISDLKSE---------REALVTESEELKVQLHLSEDKVDTVQAQLLET 910
+ EK + D++ E + E+ +L + ED + +L E
Sbjct: 4284 INQSEKVFELSEDEDIEDELPDYNVKITPAMPIDEARDL---WNKHEDSTKQLSIELCEQ 4340
Query: 911 ARRLKE 916
R + E
Sbjct: 4341 LRLILE 4346
>gnl|CDD|235899 PRK06975, PRK06975, bifunctional uroporphyrinogen-III
synthetase/uroporphyrin-III C-methyltransferase;
Reviewed.
Length = 656
Score = 31.6 bits (72), Expect = 4.9
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 1298 MTQALKREIKDLSDAHTQESN-KMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMD 1356
+ Q L + + DA T E K QAQ ++ L + L+ KL A A S +A++
Sbjct: 351 LDQELVQRQQAN-DAQTAELRVKTEQAQASVHQLDSQFAQLDGKL----ADAQSAQQALE 405
Query: 1357 QKNEELQHLREKVLTLEL--TLSNVSEE 1382
Q+ ++L R+ + E+ LS+ S++
Sbjct: 406 QQYQDLSRNRDDWMIAEVEQMLSSASQQ 433
>gnl|CDD|202833 pfam03962, Mnd1, Mnd1 family. This family of proteins includes MND1
from S. cerevisiae. The mnd1 protein forms a complex with
hop2 to promote homologous chromosome pairing and meiotic
double-strand break repair.
Length = 188
Score = 30.7 bits (70), Expect = 4.9
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 1439 LQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQLNLTLERASAGE--TELRGEIQ 1496
L + +T L KL++ E + I L+ + LK ++ T ER E +L E++
Sbjct: 64 LNKLKTRLEKLKKELEELKQRIAELQAQIEKLKKGREE---TEERTELLEELKQLEKELK 120
Query: 1497 TLQRNLMDTSLNSQSNCEKLKQLQKLLHSAEN 1528
L+ L N EKLK+ K+ A N
Sbjct: 121 KLKAELEKYEKNDPERIEKLKEETKVAKEAAN 152
Score = 30.3 bits (69), Expect = 6.8
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 655 SLKGQVVRLNKELEDTEKRAQETKASLVQQASGL-DADYQNQISNLKKQNEECVTKLTEE 713
LK ++ +L KELE+ ++R E +A + + G + + + ++ KQ E+ + KL E
Sbjct: 66 KLKTRLEKLKKELEELKQRIAELQAQIEKLKKGREETEERTELLEELKQLEKELKKLKAE 125
Query: 714 KINLKKQNEECVTKLTEEKEQVRAALEK 741
+K + E + KL EE + + A +
Sbjct: 126 LEKYEKNDPERIEKLKEETKVAKEAANR 153
Score = 29.9 bits (68), Expect = 8.7
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 603 ELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVR 662
L++L+++L L+ L+A + + E++ E ELL + + L+ ++ +
Sbjct: 70 RLEKLKKELEELKQRIAELQAQIEKLKKGREET--------EERTELLEELKQLEKELKK 121
Query: 663 LNKELEDTEKRAQETKASLVQQ 684
L ELE EK E L ++
Sbjct: 122 LKAELEKYEKNDPERIEKLKEE 143
>gnl|CDD|205692 pfam13514, AAA_27, AAA domain. This domain is found in a number of
double-strand DNA break proteins. This domain contains a
P-loop motif.
Length = 1118
Score = 31.7 bits (72), Expect = 4.9
Identities = 128/841 (15%), Positives = 266/841 (31%), Gaps = 98/841 (11%)
Query: 782 ALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNTIN 841
+L A+G+ Q L A A L V ELE+E D + + + E IN
Sbjct: 106 EILEAQGELGQYLFSA----AAGVGSLGSVRDELEKEA---DELWKPRGRKPE-----IN 153
Query: 842 TLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVD 901
++L A++ E++ +T K L + + + + E L E +L+ + +++
Sbjct: 154 VALKELKELEAEIREVQLKTRTWKD-LVKALDEAEEELANLRKELRQLEKE-KQRLERLR 211
Query: 902 TVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEKDKYAKSNKDLREMVKKVES 961
+ L E ++ +GE + DL ++Y ++ +LR + +E
Sbjct: 212 RLLPLLAERKALEQQLAALGEVI--DLPPDAV---------ERYEEARAELRAARRNLEL 260
Query: 962 EKRDQARTIDEGLQKIAVRFGDDEKQALRNQLNDQSNDVASLKKEL--LQAEQIRLDLDS 1019
+ L +I++ + A L+ Q + + +++L + E +
Sbjct: 261 LTERLEA-LQAELDEISLDEELLAQAAAIEALHQQRGEYRNAEQDLPDREGEIANAREAA 319
Query: 1020 EKVTLQEKCKFLEIEKEKYN---FVISYLLCLFQVEVELSQVTKDRSDLSHQLSLLQRKK 1076
+ Q E E + L + + L Q K D L +R+
Sbjct: 320 AALLAQIGPDADEEAVESLRPSLAAKETVTELEKRKEALDQALKSARD---ALEEREREL 376
Query: 1077 ENVVEDLARLKQKYE--------QSVEMNNRVNKNLEDLVKECEEKEVVLLDLCARLGGA 1128
+ V LA L ++ L L +E + L +RLG
Sbjct: 377 KQVRAQLAALPTVTVPEPLRAALADALRAGDIDAALAALEQEVAVAKRELAQALSRLGLW 436
Query: 1129 EERVRASSAHLLQLEASKKDVEHKLSSIGSTLRRIAALRYHAFYTLSEKEAELARIRAQY 1188
+ A + + + I R+ L E +L + A
Sbjct: 437 RGDLEELVALPVPSAEQVQAFLKEAEEIMQAKRQKRDRLLELEEDLETLELQLRHLDAAG 496
Query: 1189 DAYKSMDCHTDRSSDLERYRA--AQLHAESLLEAREKSHRQQVNRLENQLDGRASHAGGK 1246
+ R+ ++ + + + ++L ++L A G
Sbjct: 497 AVPTEEEVAAARARRDALWQDIRRGYALLEPTASAYEEAVESADQLADRLLREAQLVGEL 556
Query: 1247 MTSPSRRYSPVRGGEGGEGLIDVDPEIVRKGVRNLMQQVAQIERERDDLKAMTQALKREI 1306
+ +R+ +++ Q+E+E + L+ AL+
Sbjct: 557 -------------------------QSLRQQEEAARRRLEQLEKELEVLELALAALREAW 591
Query: 1307 KDL---------SDAHTQESNKMAQAQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQ 1357
+ + A A++ +RA + + L+ L + + A+
Sbjct: 592 QAQWAAAGLPLTPAEMEDWLAERATAREQVRAYFKARAELDALLDRRARLRAALRAALKA 651
Query: 1358 K-----NEELQHLREKVLTLELTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQDELS 1412
EEL L E L + K+ D++L + + Q L
Sbjct: 652 VAIVLPGEELAELLELARQLLEEAEKQAARKASLDERLRDAERALEEAEERHDEAQSALE 711
Query: 1413 RTEARVTKLELQRVALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKT 1472
+ + L+ + E N+ + + + + I +E +
Sbjct: 712 AWQEQWYDALLEAGLGGRASPAGALDALELLQNIKEKLQAADDLRQRIAAMERDLARFEE 771
Query: 1473 TIDQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRV 1532
++ L + G R L ++ ++L + + AE E
Sbjct: 772 EVEALAEAVAPEMLGT-----PADETARALKQRLKRARDTAAAAEKLAEEIEEAEKEVSE 826
Query: 1533 LQERLDTCQASLAELRRQQVNRLENQDDLKAMTQALKREIKDLSDAHTQESNKMAQAQQT 1592
LD +A L L R R ++L A + SD + + ++A ++T
Sbjct: 827 AAAALDEAEARLTALLRAA--RCTTIEELLAAVER--------SDTYRELRKRIAALERT 876
Query: 1593 M 1593
+
Sbjct: 877 L 877
>gnl|CDD|222709 pfam14362, DUF4407, Domain of unknown function (DUF4407). This
family of proteins is found in bacteria. Proteins in
this family are typically between 366 and 597 amino
acids in length. There is a single completely conserved
residue R that may be functionally important.
Length = 297
Score = 31.1 bits (71), Expect = 5.0
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 844 REQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEE 888
RE+L+ A+LE LK R + A LE + + L+ R+A V E +
Sbjct: 188 REKLDAAQARLETLKARLDAAIAQLEAQKAALERNRQAAVAEKQA 232
>gnl|CDD|212678 cd10236, HscA_like_NBD, Nucleotide-binding domain of HscA and
similar proteins. Escherichia coli HscA (heat shock
cognate protein A, also called Hsc66), belongs to the
heat shock protein 70 (HSP70) family of chaperones that
assist in protein folding and assembly and can direct
incompetent "client" proteins towards degradation.
Typically, HSP70s have a nucleotide-binding domain (NBD)
and a substrate-binding domain (SBD). The nucleotide
sits in a deep cleft formed between the two lobes of the
NBD. The two subdomains of each lobe change conformation
between ATP-bound, ADP-bound, and nucleotide-free
states. ATP binding opens up the substrate-binding site;
substrate-binding increases the rate of ATP hydrolysis.
HSP70 chaperone activity is regulated by various
co-chaperones: J-domain proteins and nucleotide exchange
factors (NEFs). HscA's partner J-domain protein is HscB;
it does not appear to require a NEF, and has been shown
to be induced by cold-shock. The HscA-HscB
chaperone/co-chaperone pair is involved in [Fe-S]
cluster assembly.
Length = 355
Score = 31.0 bits (71), Expect = 5.2
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 892 QLHLSEDKVDTVQAQLLETARRLKEAENVGESLRKDLLDTKTHLADSNFEK 942
+ L D QA+LL AR+ KEA + E + D K + FEK
Sbjct: 232 KYGLKSLISDEDQAELLLIARKAKEALSGAEEVEVRGQDFKCTITREEFEK 282
>gnl|CDD|234955 PRK01433, hscA, chaperone protein HscA; Provisional.
Length = 595
Score = 31.4 bits (71), Expect = 5.4
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 427 SQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLNSNLDKVQKNNS 486
+++D T L + E EAL+ NIE E + L ++ EI+ ++ SL N+ +
Sbjct: 498 AKIDYTTRLLQEAVIEAEALIFNIERAIAELTTL-LSESEIS-IINSLLDNIKEAVHARD 555
Query: 487 RLSKINESLQSEKLFLQNELD 507
IN S++ K ++ +D
Sbjct: 556 I-ILINNSIKEFKSKIKKSMD 575
>gnl|CDD|237551 PRK13902, alaS, alanyl-tRNA synthetase; Provisional.
Length = 900
Score = 31.4 bits (72), Expect = 5.4
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 27/139 (19%)
Query: 871 KISDLKSER-------------EALVTESEELKVQLHLSEDKVDTVQAQLLETARRL--- 914
KI LK+ER +A V +EL+ L + + + QL +T R
Sbjct: 712 KI--LKTERIQDGVERLEFAAGDAAVEYIQELEDLLKEAAEILGVPPEQLPKTVERFFEE 769
Query: 915 -KEAENVGESLRKDLLDTKTHLADSNFEK--------DKYAKSNKDLREMVKKVESEKRD 965
KE + E LRK+L + S E+ ++ +LR++ ++ E +
Sbjct: 770 WKEQKKEIEKLRKELAELLASELLSKAEEVGGVKVVVEEVDADEDELRKIANELAKEGKV 829
Query: 966 QARTIDEGLQKIAVRFGDD 984
+ G +I V G+D
Sbjct: 830 ALVVLGNGGGQIVVGVGED 848
>gnl|CDD|113664 pfam04899, MbeD_MobD, MbeD/MobD like. The MbeD and MobD proteins are
plasmid encoded, and are involved in the plasmids
mobilisation and transfer in the presence of conjugative
plasmids.
Length = 70
Score = 28.7 bits (64), Expect = 5.4
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 1419 TKLELQRV-ALEGDQQRLQMLLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTIDQL 1477
T+LE Q + ALE QQ + LQE E+ +LQ R L E+ T L + L
Sbjct: 2 TELETQLLSALEQLQQDYEQRLQEWESAFAELQRMFGLTQRENAALSEQVTGLSQQVQSL 61
Query: 1478 NLTLERAS 1485
+ + R S
Sbjct: 62 SEQVRRLS 69
>gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family. This family of
proteins contain a band 4.1 domain (pfam00373), at their
amino terminus. This family represents the rest of these
proteins.
Length = 244
Score = 30.9 bits (70), Expect = 5.7
Identities = 21/82 (25%), Positives = 40/82 (48%)
Query: 538 NEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITI 597
E LK + +LLE+ +E++ +E+ E E ERL + + +++K E
Sbjct: 39 EEKLKQEEEEAQLLEKKADELEEENRRLEEEAAASEEERERLEAEVDEATAEVAKLEEER 98
Query: 598 EANDKELQRLQEQLASLRSDKE 619
E + E ++LQ++L + E
Sbjct: 99 EKKEAETRQLQQELREAQEAHE 120
>gnl|CDD|200948 pfam00038, Filament, Intermediate filament protein.
Length = 312
Score = 31.0 bits (71), Expect = 5.9
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 1332 EEKYALETKLSQTKAAANSQSEAMDQKNEELQHLREKVLTLELTLSNVSEEKSQGDDKLM 1391
EE Y ++KL + + AA +A+ EE+ LR ++ +LE+ L ++ K Q
Sbjct: 190 EEWY--KSKLEELQQAAARNGDALRSAKEEITELRRQIQSLEIELQSL---KKQKASLER 244
Query: 1392 KCRESGARLDAEKRALQDELSRTEARVTKL--ELQR 1425
+ E R + E QD +S E + +L E+ R
Sbjct: 245 QLAELEERYELELADYQDTISELEEELQQLKAEMAR 280
>gnl|CDD|227731 COG5444, COG5444, Uncharacterized conserved protein [Function
unknown].
Length = 565
Score = 31.3 bits (71), Expect = 5.9
Identities = 22/123 (17%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 524 EDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDR 583
E ++ E+ + +E +E++E+ K+ ++ +L+ DV ++ LD
Sbjct: 89 EPLSNGYVEEAFLKHELPNGYDRYEEIMEEQKKAIKDILS-------DVSHILDLGKLDT 141
Query: 584 SDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLE 643
D +++ + ++L +L ++ +L + ES L LE+ +K +
Sbjct: 142 EDFKDEVDSARKHAKDTLEKLYKLDQEGMTLMAAVESKMQELKAIIRQLEEWTIKGGATK 201
Query: 644 HEV 646
V
Sbjct: 202 KGV 204
>gnl|CDD|172158 PRK13589, PRK13589, flagellin; Provisional.
Length = 576
Score = 31.2 bits (70), Expect = 6.0
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 426 TSQLDQTKAQLAQVGREKEALVKNIEMLRVEKSALEKNKREINEMVESLN 475
+ LDQ +A + V + + + NI + +V A E R+++ ES N
Sbjct: 497 ITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESAN 546
>gnl|CDD|219934 pfam08614, ATG16, Autophagy protein 16 (ATG16). Autophagy is a
ubiquitous intracellular degradation system for
eukaryotic cells. During autophagy, cytoplasmic
components are enclosed in autophagosomes and delivered
to lysosomes/vacuoles. ATG16 (also known as Apg16) has
been shown to be bind to Apg5 and is required for the
function of the Apg12p-Apg5p conjugate in the yeast
autophagy pathway.
Length = 194
Score = 30.2 bits (68), Expect = 6.1
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 596 TIEANDKELQRLQEQLASLRSDKESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQES 655
I +++L +L+E+L L + L L LEQ + +QLE + EL + S
Sbjct: 68 AIAEMEQKLAKLREELTELHKKRGELAQRLLLLNDELEQLRREIQQLEKTIAELRSEITS 127
Query: 656 LKGQVVRLNKELEDTEKRAQ 675
L+ ++ L +EL++ EK +
Sbjct: 128 LETEIRDLREELQEKEKDNE 147
>gnl|CDD|191111 pfam04849, HAP1_N, HAP1 N-terminal conserved region. This family
represents an N-terminal conserved region found in
several huntingtin-associated protein 1 (HAP1)
homologues. HAP1 binds to huntingtin in a polyglutamine
repeat-length-dependent manner. However, its possible
role in the pathogenesis of Huntington's disease is
unclear. This family also includes a similar N-terminal
conserved region from hypothetical protein products of
ALS2CR3 genes found in the human juvenile amyotrophic
lateral sclerosis critical region 2q33-2q34.
Length = 307
Score = 30.9 bits (70), Expect = 6.6
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 806 DRLSQVLKELEEEKCTL----DRIKRESAGRSEQDRNTINTLREQLNRTVAKL----EEL 857
+ L + LK LEEE L +K E+ E+++ +N +QL ++ EEL
Sbjct: 164 EALQEKLKLLEEENEHLRSEASHLKTETVTYEEKEQQLVNDCVKQLREANDQIASLSEEL 223
Query: 858 KTRTE------EEKAILERKISDLKSEREALVTESEELKVQLHLSEDKVDTVQAQLLETA 911
+TE EE L +I DL+ + ++ E+EEL+ L ++D +QA+L E
Sbjct: 224 AKKTEDLERQQEEITHLLSQIVDLQKKCKSYALENEELQQHLAAAKDAQRQLQAELQELQ 283
Query: 912 RRLKE 916
+ E
Sbjct: 284 DKYAE 288
>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional.
Length = 259
Score = 30.6 bits (70), Expect = 7.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1703 QQLRQALGDSLRTVAHDPAVDALLL 1727
+ QAL D+L A DPAV ++L
Sbjct: 31 AAMYQALADALEAAATDPAVRVVVL 55
>gnl|CDD|215974 pfam00529, HlyD, HlyD family secretion protein.
Length = 304
Score = 30.5 bits (69), Expect = 7.3
Identities = 25/150 (16%), Positives = 45/150 (30%)
Query: 780 EDALLRAEGDKQQALLIAQQDQKAIQDRLSQVLKELEEEKCTLDRIKRESAGRSEQDRNT 839
+ AL RAE + A AQ + Q L + + +A R +
Sbjct: 39 QAALDRAEAELAAAQADAQARLARAERDRLQALVAQAAIQSEQEADAARAALREALAASR 98
Query: 840 INTLREQLNRTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDK 899
+ QL L + + L + L + + QL + +
Sbjct: 99 GAASKAQLEAARDNLRSALALLPISLGRIGASQATLGALLNNLQAQGLAARAQLDEAYLQ 158
Query: 900 VDTVQAQLLETARRLKEAENVGESLRKDLL 929
+ A+LL R + E V + +
Sbjct: 159 LAQTAAELLRLIRAPAQGERVQSEAQLRSV 188
>gnl|CDD|237560 PRK13922, PRK13922, rod shape-determining protein MreC;
Provisional.
Length = 276
Score = 30.3 bits (69), Expect = 7.5
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 237 LSKIRSDLNQSTRQMSGACNGLVALSAGSSATNAEKDKLVKENSELKSQVTVLKSENNAM 296
LS +R + + N +G + A L +EN ELK ++ L+S
Sbjct: 36 LSPVRQVVGDVVSPVQRVVNAPREFVSGVFESLASLFDLREENEELKKELLELESRLQE- 94
Query: 297 ANESKQKEERVEELLKRIHTLEARV 321
+ + + R+ ELL +L+ +
Sbjct: 95 LEQLEAENARLRELLNLKESLDYQF 119
>gnl|CDD|221049 pfam11262, Tho2, Transcription factor/nuclear export subunit
protein 2. THO and TREX form a eukaryotic complex which
functions in messenger ribonucleoprotein metabolism and
plays a role in preventing the transcription-associated
genetic instability. Tho2, along with four other
subunits forms THO.
Length = 296
Score = 30.4 bits (69), Expect = 7.6
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 441 REKEALVKNIEMLRVEKSALEKNKRE---INEMVESLNSNLDK----VQKNNSRLSKINE 493
+E E L K I+ L S ++K K+E + +++ L L K +K RLS+
Sbjct: 31 KEIERLEKQIKELDSSSSGIDKKKKEKKRLKSLIKKLEEELKKHIEHNEKTKKRLSE--- 87
Query: 494 SLQSEKLFLQNELDRINS 511
+ F + D INS
Sbjct: 88 --EKSSWFPSKDPDEINS 103
>gnl|CDD|240336 PTZ00260, PTZ00260, dolichyl-phosphate beta-glucosyltransferase;
Provisional.
Length = 333
Score = 30.5 bits (69), Expect = 7.8
Identities = 30/145 (20%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 504 NELDRINSDMDAREVELRGKEDMNRRLREDLLIANEDLKNA--KLAKELLEQN-KEEMQT 560
NE DR+ + L + + + + +++I N+ K+ K+AK+ QN +
Sbjct: 80 NEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDI 139
Query: 561 LLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEAND----KELQRLQEQLASLRS 616
L + ++KG A +L R KY + ++A+ + +L++ + +
Sbjct: 140 RLLSLLRNKGKGGAVRIGMLASR-------GKYILMVDADGATDIDDFDKLEDIMLKI-- 190
Query: 617 DKESLEAILFDTQSHLEQSDVKKEQ 641
+++ I+F +++HL SDV ++
Sbjct: 191 -EQNGLGIVFGSRNHLVDSDVVAKR 214
>gnl|CDD|233816 TIGR02302, aProt_lowcomp, TIGR02302 family protein. Members of
this family are long (~850 residue) bacterial proteins
from the alpha Proteobacteria. Each has 2-3 predicted
transmembrane helices near the N-terminus and a long
C-terminal region that includes stretches of
Gln/Gly-rich low complexity sequence, predicted by TMHMM
to be outside the membrane. In Bradyrhizobium japonicum,
two tandem reading frames are together homologous the
single members found in other species; the cutoffs
scores are set low enough that the longer scores above
the trusted cutoff and the shorter above the noise
cutoff for this model.
Length = 851
Score = 30.7 bits (69), Expect = 7.9
Identities = 38/217 (17%), Positives = 84/217 (38%), Gaps = 11/217 (5%)
Query: 510 NSDMDAREVELRGKEDMNRRLREDLLIANEDLKNAKLAKELLEQNKEEMQTLLAHIEKSK 569
+ D+ E LR +D L++ L D + +L +L + M+ L + +
Sbjct: 495 DGDLSDAERRLRAAQDA---LKDALERGASDEEIKQLTDKLRAAMQTYMRQLAQQLRNNP 551
Query: 570 GDV-EAEMERL-LLDRSDMNEQISKYEITIEANDKELQRLQEQLASLRSDKESLEAILFD 627
+ +L + D+ + + E + D++ + + L+ L+ +L+
Sbjct: 552 QQLARPLDPNTKVLRQQDLQNMMDQIENLARSGDRDQAK--QLLSQLQQMMNNLQMGQPG 609
Query: 628 TQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETKASL----VQ 683
+ EQ +++ EL+ KQ+ L+ + +L+++ R Q+ + + Q
Sbjct: 610 QGQQMGDQSGDMEQQMNKLGELMRKQQQLRDETFKLDQDQRRDRMRGQDGEQNFGDDMPQ 669
Query: 684 QASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQ 720
Q + K Q EE L + + LK +
Sbjct: 670 QDGQPNGQPNLHDRLRKLQQEEAKRGLGQSQGGLKGE 706
>gnl|CDD|129374 TIGR00273, TIGR00273, iron-sulfur cluster-binding protein. Members
of this family have a perfect 4Fe-4S binding motif
C-x(2)-C-x(2)-C-x(3)-CP followed by either a perfect or
imperfect (the first Cys replaced by Ser) second copy.
Members probably bind two 4fe-4S iron-sulfur clusters
[Energy metabolism, Electron transport].
Length = 432
Score = 30.6 bits (69), Expect = 8.0
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 12/179 (6%)
Query: 569 KGDVEAEMERLLLDRSDMNEQISKYE----ITIEANDKELQRLQEQLASLRSDKESLEAI 624
+ + ERL +R + E++ +E + E K L+ L L L+ +
Sbjct: 7 REALRNAQERLRANRKLLVEELGYWEEWRELVKEIKLKVLENLDFYLDQLKENVTQRGGH 66
Query: 625 LFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELEDTEKRAQETK-ASLVQ 683
++ ++ E + + + + + +VK +S+ + + LN+ LE ET L+
Sbjct: 67 VYYAKTAEEARKIIGKVAQEKNGKKVVKSKSMVSEEIGLNEVLEKIGIEVWETDLGELIL 126
Query: 684 QASGLDADYQNQISNLKKQNEECVTKLTEEKINLKKQNEECVTKLTEEKEQVRAALEKK 742
Q G D + L K N + + ++ +E++ + EE L E R + +K
Sbjct: 127 QLDG-DPPSHIVVPALHK-NRQQIGEILKERLGY--EGEESPEVLARE---ARKFMREK 178
>gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein. This family
consists of several Borrelia P83/P100 antigen proteins.
Length = 489
Score = 30.7 bits (69), Expect = 8.2
Identities = 28/158 (17%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 1302 LKREIKDLSDAHTQESNKMAQ-AQQTMRALQEEKYALETKLSQTKAAANSQSEAMDQKNE 1360
+R++ DL + +QE K AQ ++ + Q + + K + A+ Q + + QK +
Sbjct: 196 FRRDMTDLKERESQEDAKRAQQLKEELDKKQIDADKAQQKADFAQDNADKQRDEVRQKQQ 255
Query: 1361 ELQHLREKVLTLE------------LTLSNVSEEKSQGDDKLMKCRESGARLDAEKRALQ 1408
E ++L + T + E + D++ +K ++ A K+ +
Sbjct: 256 EAKNLPKPADTSSPKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKA--FDLKQESK 313
Query: 1409 DELSRTEARVTKLELQRVALEGDQQRLQMLLQEKETNL 1446
E + + + +R + D Q+ + ++ + T+L
Sbjct: 314 ASEKEAEDKELEAQKKREPVAEDLQKTKPQVEAQPTSL 351
>gnl|CDD|234714 PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.
Length = 438
Score = 30.5 bits (70), Expect = 8.7
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 21/144 (14%)
Query: 1419 TKLELQRVALEGDQQRLQM----LLQEKETNLHKLQERCEHQCRNITGLEERCTSLKTTI 1474
+ EL + L+ QQRL L++K L +L R + Q E + +
Sbjct: 261 DRAELLQ-RLQQLQQRLARAMRRRLEQKRQRLDQLARRLKFQ-----SPERLLAQQQQRL 314
Query: 1475 DQLNLTLERASAGETELRGEIQTLQRNLMDTSLNSQSNCEKLKQLQKLLHSAENEKRVLQ 1534
D+L L+RA L + + L Q+ ++++ Q+ L L+
Sbjct: 315 DRLQQRLQRALERRLRLA----KQRLERLSQRLQQQNPQRRIERAQQRLEQ-------LE 363
Query: 1535 ERLDTCQASLAELRRQQVNRLENQ 1558
+RL + +RQ++ L Q
Sbjct: 364 QRLRRAMRRQLKRKRQRLEALAQQ 387
>gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA. During
the bacterial cell cycle, the tubulin-like cell-division
protein FtsZ polymerises into a ring structure that
establishes the location of the nascent division site.
EzrA modulates the frequency and position of FtsZ ring
formation.
Length = 559
Score = 30.6 bits (70), Expect = 9.4
Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 36/210 (17%)
Query: 547 AKELLEQNKEEMQTLLAHIEKSKGDVEAEMERLLLDRSDMNEQISKYEITIEANDKELQR 606
AK+ +E+N +++ L H + + E++RL + T+ ++ E R
Sbjct: 300 AKKFVEKNIDKLTDFLEHAREQNKQLLLELDRL------------QQSYTLNEDELETVR 347
Query: 607 -LQEQLASLRSD-KESLEAILFDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLN 664
L++QL L + + +E I ++ E + + E++E +++E+ +QE L +
Sbjct: 348 ELEKQLEELEAQYDQLVERIAEKKVAYSELQE-ELEEIEKQLEEIEKEQEELSESL---- 402
Query: 665 KELEDTEKRAQETKASLVQQAS------------GLDADYQNQISNLKKQNEECVTKLTE 712
+ L E A+E Q+ GL DY + + E +L E
Sbjct: 403 QGLRKDELEAREKLQEYRQKLHEIKRYLEKSNLPGLPEDYLEYFFVVSDEIEALADELNE 462
Query: 713 EKINLKKQNEECVTKLTEEKEQVRAALEKK 742
IN+ V + EE L++K
Sbjct: 463 VPINMDA-----VNRQLEEATDDVETLKEK 487
>gnl|CDD|112953 pfam04163, Tht1, Tht1-like nuclear fusion protein.
Length = 554
Score = 30.5 bits (68), Expect = 9.6
Identities = 72/331 (21%), Positives = 127/331 (38%), Gaps = 32/331 (9%)
Query: 626 FDTQSHLEQSDVKKEQLEHEVQELLVKQESLKGQVVRLNKELE-DTEKRAQET-KASLVQ 683
FD+ +H + KK + L + + S+ N E D E R + K S+
Sbjct: 48 FDSLAHKFPALFKKSTCVKDAAALFIPKCSI------ANGEESIDAENRIESAIKLSICD 101
Query: 684 -QASGLDADYQNQISNLKKQNEECVTKL-------TEEKINLKKQNEECVTKLTE-EKEQ 734
+ASG+ + + + +C+ +L + N C L E EKE
Sbjct: 102 FEASGIGEAPEECMRDDLGSMMDCMFELESSSQWWLSFSGHFHDLNHICREALLEFEKEL 161
Query: 735 VRAALEKKLHATVKQITEEKDCELSRLQANLCQLQSHIDKICQQHEDALLRAEGDKQQAL 794
+ +E L+ T Q D ++ L +L + DK+ Q D + L
Sbjct: 162 I---IELFLNITELQDQFGDDLDMKIL--HLMNFEMEQDKM-NQFIDDFAGKFRNSDIEL 215
Query: 795 LIAQQDQKAIQDR--LSQVLKELEEEKCTLDRIKRESAGRSEQ--DRNT--INTLREQLN 848
A ++ + I + LS+ +E K D I + D N+ N + E
Sbjct: 216 RFADENFRIILEIMDLSEFQNHQQEGKVNQDEILETIEQLESEIFDINSFFANFIEESAG 275
Query: 849 RTVAKLEELKTRTEEEKAILERKISDLKSEREALVTESEELKVQLHLSEDKV-DTVQAQL 907
+E+L E AI I DLK + A + + +K + +SED + ++VQ +
Sbjct: 276 VHNHIIEDLADEFASENAIALSAIGDLKDDFLAFL--EDRIKNLIEMSEDSLKESVQRNI 333
Query: 908 LETARRLKEAENVGESLRKDLLDTKTHLADS 938
+E E+ L+++L K L++
Sbjct: 334 DFVNSGFQELEDFSIGLKEELGGLKKDLSEQ 364
>gnl|CDD|233583 TIGR01813, flavo_cyto_c, flavocytochrome c. This model describes a
family of redox proteins related to the succinate
dehydrogenases and fumarate reductases of E. coli,
mitochondria, and other well-characterized systems. A
member of this family from Shewanella frigidimarina
NCIMB400 is characterized as a water-soluble periplasmic
protein with four heme groups, a non-covalently bound
FAD, and essentially unidirectional fumarate reductase
activity. At least seven distinct members of this family
are found in Shewanella oneidensis, a species able to use
a wide variety of pathways for respiraton [Energy
metabolism, Electron transport].
Length = 439
Score = 30.4 bits (69), Expect = 9.8
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 930 DTKTHLADSNFEKDKYAKSNKDLREMVKKVESEKRDQARTIDEGLQKIAVRFGDDEKQAL 989
DT + + K Y + D+ + KKV++ R + L+++A +FG AL
Sbjct: 279 DTVSDAILAQPGKSAYLIFDDDVYKKAKKVDNYYRLGVAYKGDSLEELAKQFGIPA-AAL 337
Query: 990 RNQLNDQSNDVASLKKELL 1008
+ + D ++ VAS K
Sbjct: 338 KKTVKDYNDYVASGKDTPF 356
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.309 0.124 0.321
Gapped
Lambda K H
0.267 0.0724 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 85,417,124
Number of extensions: 8676258
Number of successful extensions: 22676
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17241
Number of HSP's successfully gapped: 2493
Length of query: 1760
Length of database: 10,937,602
Length adjustment: 111
Effective length of query: 1649
Effective length of database: 6,014,308
Effective search space: 9917593892
Effective search space used: 9917593892
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (29.2 bits)