Your job contains 1 sequence.
>psy11584
NLISAACILLSSLFFITHASASYAGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLN
MNRMQSGIDTYGQGRSPFFLEPAVIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTRE
PFRWDQRLFSLVLQRDMGVVACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQS
GVVINFEKIGPDPPPINESKYLTLSFESNISSSFGSSTPVGTGGAMNIINSTAWHNCRKL
IYVPRSAQKGFPVGFWPIPESFWPDITASSLKGFPVGFWPIPESFWPDITASSLPPRSAH
PNVKFTCTSQDPLVIENLPFDKYELEPSPLTQYILARKQPTICWQVFVANSYKNSDVGHP
FGYLKASTNLSTVNLFVMPYNYPALLPLIDDFFKVHRMKVTPEWRGNFQKYIGTMPSYYA
AYSSSIHTMPISQMGNYQEYLKRMAAPLREVESTPVRQHMFGNPFKIDKRMMVDEADIDL
VGGSPHKGGGKRSPHGDSGGGGGGVSPRLASKRKPGPIPKHVQPLRRALIRMGMPAAISQ
SLIPDSMENSLSYSVLSYLKRMKIQAKDEFDRN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11584
(573 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:2442593 - symbol:Ddx26b "DEAD/H (Asp-Glu-Ala-Asp/... 725 2.1e-147 3
UNIPROTKB|E1BV07 - symbol:INTS6 "Uncharacterized protein"... 623 5.2e-138 3
MGI|MGI:1202397 - symbol:Ints6 "integrator complex subuni... 616 1.4e-137 3
UNIPROTKB|E1BF57 - symbol:INTS6 "Uncharacterized protein"... 609 5.3e-137 3
UNIPROTKB|F1RK31 - symbol:INTS6 "Uncharacterized protein"... 609 5.3e-137 3
UNIPROTKB|Q9UL03 - symbol:INTS6 "Integrator complex subun... 609 8.0e-137 3
ZFIN|ZDB-GENE-040426-1150 - symbol:ddx26b "DEAD/H (Asp-Gl... 619 1.7e-136 3
FB|FBgn0261383 - symbol:IntS6 "Integrator 6" species:7227... 652 6.0e-119 4
UNIPROTKB|B3KQH5 - symbol:INTS6 "Integrator complex subun... 581 3.8e-96 3
DICTYBASE|DDB_G0277953 - symbol:ints6 "integrator complex... 405 2.2e-79 3
UNIPROTKB|G5E9X1 - symbol:INTS6 "Integrator complex subun... 423 2.9e-58 2
WB|WBGene00000994 - symbol:dic-1 species:6239 "Caenorhabd... 218 1.8e-36 3
RGD|1309480 - symbol:Ints6 "integrator complex subunit 6"... 287 1.2e-24 1
UNIPROTKB|C9J0C6 - symbol:INTS6 "Integrator complex subun... 193 4.0e-12 1
>MGI|MGI:2442593 [details] [associations]
symbol:Ddx26b "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide
26B" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002035
PROSITE:PS50234 SMART:SM00327 MGI:MGI:2442593 EMBL:AK083942
EMBL:BC066792 IPI:IPI00223230 RefSeq:NP_766367.1 UniGene:Mm.474772
ProteinModelPortal:Q8BND4 PhosphoSite:Q8BND4 PaxDb:Q8BND4
PRIDE:Q8BND4 Ensembl:ENSMUST00000039374 Ensembl:ENSMUST00000172250
GeneID:236790 KEGG:mmu:236790 UCSC:uc009tgg.2 CTD:203522
eggNOG:NOG276796 GeneTree:ENSGT00390000016655 HOGENOM:HOG000015308
HOVERGEN:HBG081468 InParanoid:Q8BND4 KO:K13180 OrthoDB:EOG4PVNXX
NextBio:383078 Bgee:Q8BND4 CleanEx:MM_DDX26B Genevestigator:Q8BND4
GermOnline:ENSMUSG00000035967 Uniprot:Q8BND4
Length = 861
Score = 725 (260.3 bits), Expect = 2.1e-147, Sum P(3) = 2.1e-147
Identities = 143/257 (55%), Positives = 179/257 (69%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ +G+T LG AL+ +FD+LN+NR+ SGID YGQGR+PFFLEP+
Sbjct: 64 AGWKENHATFMNELKNLQASGLTTLGQALRSSFDLLNLNRLISGIDNYGQGRNPFFLEPS 123
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQ--------- 134
+++ ITDG KL++ VQE+ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+
Sbjct: 124 ILITITDGNKLTSTASVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGVASTEP 183
Query: 135 RDMGVVACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
+G V D S I MCEVTGGRSYCV + RML QC++SLVQKVQSGVVINFEK GPDP
Sbjct: 184 EQLGSVPSDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVQSGVVINFEKTGPDPL 243
Query: 195 PINESKYLTLXXXXXXXXXXXXXTPVGTGGAMNIINSTAWHNCRKLIYVPRSAQKGFPVG 254
P+ E + L P N+ + WH+C KLIYV +++ G PVG
Sbjct: 244 PVGEDTLMELCR------------P------SNLFAAQPWHSCHKLIYVRPNSKTGVPVG 285
Query: 255 FWPIPESFWPDITASSL 271
WPIPESFWP+ SL
Sbjct: 286 HWPIPESFWPEQNLPSL 302
Score = 558 (201.5 bits), Expect = 2.1e-147, Sum P(3) = 2.1e-147
Identities = 97/154 (62%), Positives = 119/154 (77%)
Query: 266 ITASSLKGFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYEL 325
+ +S G PVG WPIPESFWP+ SLPPR++HP V+F+C +P+VI+ LPFDKYEL
Sbjct: 274 VRPNSKTGVPVGHWPIPESFWPEQNLPSLPPRTSHPVVRFSCVDCEPMVIDKLPFDKYEL 333
Query: 326 EPSPLTQYILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPAL 385
EPSPLTQYIL RK P CWQVFV +S K +++G+PFGYLKAST L+ VNLFVMPYNYP L
Sbjct: 334 EPSPLTQYILERKSPHTCWQVFVTSSSKYNELGYPFGYLKASTTLTCVNLFVMPYNYPVL 393
Query: 386 LPLIDDFFKVHRMKVTPEWRGNFQKYIGTMPSYY 419
LPL+DD FKVH++K +WR F Y+ T+P YY
Sbjct: 394 LPLLDDLFKVHKLKPNLKWRQAFDSYLKTLPPYY 427
Score = 193 (73.0 bits), Expect = 2.1e-147, Sum P(3) = 2.1e-147
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 425 SIHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVG 482
S+H++P++QMGNYQEYLK +A+PLRE++ P R H FGNPFK DK+ MM+DEAD +VG
Sbjct: 545 SLHSVPVAQMGNYQEYLKMLASPLRELDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVVG 604
>UNIPROTKB|E1BV07 [details] [associations]
symbol:INTS6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0016180
"snRNA processing" evidence=IEA] [GO:0032039 "integrator complex"
evidence=IEA] InterPro:IPR002035 PROSITE:PS50234 SMART:SM00327
GO:GO:0015629 GO:GO:0032039 GeneTree:ENSGT00390000016655
GO:GO:0016180 OMA:EQCAEEN EMBL:AADN02005354 EMBL:AADN02005355
EMBL:AADN02005356 IPI:IPI00580417 Ensembl:ENSGALT00000027488
NextBio:20822009 Uniprot:E1BV07
Length = 888
Score = 623 (224.4 bits), Expect = 5.2e-138, Sum P(3) = 5.2e-138
Identities = 117/186 (62%), Positives = 146/186 (78%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T LG +L+ FD+LN+NR+ +GID YGQGR+PFFLEPA
Sbjct: 64 AGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPA 123
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQ--------- 134
+I+ +TDG KL+ +G+QE+ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+
Sbjct: 124 IIITVTDGSKLTTTSGIQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGVSSPES 183
Query: 135 RDMGVVACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
M V D+S I MCEVTGGRSYCV S RML QC++SLVQKVQSGVVINFEK GPDP
Sbjct: 184 EQMTGVPVDDSAITPMCEVTGGRSYCVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPS 243
Query: 195 PINESK 200
PI++ +
Sbjct: 244 PIDDGQ 249
Score = 574 (207.1 bits), Expect = 5.2e-138, Sum P(3) = 5.2e-138
Identities = 98/147 (66%), Positives = 120/147 (81%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G P+G WP+PESFWPD + +LPPR++HP VKF+CT +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 277 GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQ 336
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
+IL RK P CWQV+V+NS K S++GHPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 337 FILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL 396
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH+ K T +W +F+ Y+ TMP YY
Sbjct: 397 FKVHKAKPTLKWLQSFESYLKTMPPYY 423
Score = 193 (73.0 bits), Expect = 5.2e-138, Sum P(3) = 5.2e-138
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 579 VHSVPIAQMGNYQEYLKQIPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVSG 637
Query: 484 SPHK 487
+K
Sbjct: 638 PQNK 641
Score = 138 (53.6 bits), Expect = 3.9e-92, Sum P(3) = 3.9e-92
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 234 WHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
WH+C KLIYV + + G P+G WP+PESFWPD + +L
Sbjct: 261 WHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTL 298
Score = 112 (44.5 bits), Expect = 1.8e-129, Sum P(3) = 1.8e-129
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI D++E LSYSV+SYLK++ QAK E DR
Sbjct: 421 PYYLGPLKKAVRMMGAP-----NLIADNVEYGLSYSVISYLKKLSQQAKIESDR 469
Score = 41 (19.5 bits), Expect = 3.5e-76, Sum P(3) = 3.5e-76
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPS 417
+VH + + GN+Q+Y+ +PS
Sbjct: 578 QVHSVPIAQ--MGNYQEYLKQIPS 599
>MGI|MGI:1202397 [details] [associations]
symbol:Ints6 "integrator complex subunit 6" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0016180
"snRNA processing" evidence=ISO] [GO:0032039 "integrator complex"
evidence=ISO] InterPro:IPR002035 PROSITE:PS50234 SMART:SM00327
MGI:MGI:1202397 GO:GO:0015629 GO:GO:0032039 eggNOG:NOG276796
GeneTree:ENSGT00390000016655 HOGENOM:HOG000015308
HOVERGEN:HBG081468 GO:GO:0016180 KO:K13143 CTD:26512 OMA:EQCAEEN
ChiTaRS:INTS6 EMBL:AK046055 EMBL:AK172178 EMBL:BC058637
EMBL:BC059263 EMBL:U57368 IPI:IPI00461472 IPI:IPI00798463
IPI:IPI00798507 PIR:T30176 RefSeq:NP_032741.2 UniGene:Mm.319684
UniGene:Mm.441110 ProteinModelPortal:Q6PCM2 STRING:Q6PCM2
PhosphoSite:Q6PCM2 PaxDb:Q6PCM2 PRIDE:Q6PCM2
Ensembl:ENSMUST00000053959 GeneID:18130 KEGG:mmu:18130
UCSC:uc007ugp.1 UCSC:uc007ugr.1 UCSC:uc007ugu.1 InParanoid:Q6PCM2
OrthoDB:EOG4HHP1N NextBio:293364 Bgee:Q6PCM2 CleanEx:MM_INTS6
Genevestigator:Q6PCM2 GermOnline:ENSMUSG00000035161 Uniprot:Q6PCM2
Length = 883
Score = 616 (221.9 bits), Expect = 1.4e-137, Sum P(3) = 1.4e-137
Identities = 119/186 (63%), Positives = 145/186 (77%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T LG +L+ FD+LN+NR+ +GID YGQGR+PFFLEPA
Sbjct: 64 AGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPA 123
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQRD--MGV-- 139
+I+ ITDG KL+ +GVQ++ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+ M V
Sbjct: 124 IIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVES 183
Query: 140 -----VACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
V D+S I MCEVTGGRSY V S RML QC++SLVQKVQSGVVINFEK GPDPP
Sbjct: 184 EQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPP 243
Query: 195 PINESK 200
P E +
Sbjct: 244 PAEEGQ 249
Score = 578 (208.5 bits), Expect = 1.4e-137, Sum P(3) = 1.4e-137
Identities = 98/147 (66%), Positives = 121/147 (82%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G P+G WP+PESFWPD + +LPPR++HP VKF+CT +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 277 GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQ 336
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
+IL RK P CWQV+V+NS K +++GHPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 337 FILERKSPQTCWQVYVSNSAKYNELGHPFGYLKASTALTCVNLFVMPYNYPVLLPLLDDL 396
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH+ K T +WR +F+ Y+ TMP YY
Sbjct: 397 FKVHKAKPTLKWRQSFESYLKTMPPYY 423
Score = 193 (73.0 bits), Expect = 1.4e-137, Sum P(3) = 1.4e-137
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 578 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 636
Query: 484 SPHK 487
+K
Sbjct: 637 PQNK 640
Score = 140 (54.3 bits), Expect = 1.7e-91, Sum P(3) = 1.7e-91
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 231 STAWHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
S WH+C KLIYV + + G P+G WP+PESFWPD + +L
Sbjct: 258 SQPWHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTL 298
Score = 119 (46.9 bits), Expect = 8.7e-130, Sum P(3) = 8.7e-130
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI DSME LSYSV+SYLK++ QAK E DR
Sbjct: 421 PYYLGPLKKAVRMMGAP-----NLIADSMEYGLSYSVISYLKKLSQQAKIESDR 469
Score = 41 (19.5 bits), Expect = 1.5e-75, Sum P(3) = 1.5e-75
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPS 417
+VH + + GN+Q+Y+ +PS
Sbjct: 577 QVHSVPIAQ--MGNYQEYLKQVPS 598
>UNIPROTKB|E1BF57 [details] [associations]
symbol:INTS6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032039 "integrator complex" evidence=IEA] [GO:0016180
"snRNA processing" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] GO:GO:0015629 GO:GO:0032039
GeneTree:ENSGT00390000016655 GO:GO:0016180 OMA:EQCAEEN
EMBL:DAAA02032953 EMBL:DAAA02032954 EMBL:DAAA02032955
IPI:IPI00689627 Ensembl:ENSBTAT00000003868 Uniprot:E1BF57
Length = 879
Score = 609 (219.4 bits), Expect = 5.3e-137, Sum P(3) = 5.3e-137
Identities = 117/186 (62%), Positives = 145/186 (77%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T LG +L+ FD+LN+NR+ +GID YGQGR+PFFLEPA
Sbjct: 56 AGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPA 115
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQRD--MGV-- 139
+I+ ITDG KL+ +GVQ++ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+ M V
Sbjct: 116 IIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVES 175
Query: 140 -----VACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
V D+S I MCEVTGGRSY V S RML QC++SLVQKVQSGVVINFEK GPDP
Sbjct: 176 EQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPS 235
Query: 195 PINESK 200
P+ + +
Sbjct: 236 PVEDGQ 241
Score = 581 (209.6 bits), Expect = 5.3e-137, Sum P(3) = 5.3e-137
Identities = 99/147 (67%), Positives = 121/147 (82%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G P+G WP+PESFWPD + +LPPR++HP VKF+CT +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 269 GVPIGHWPVPESFWPDQNSPTLPPRTSHPIVKFSCTDCEPMVIDKLPFDKYELEPSPLTQ 328
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
+IL RK P CWQV+V+NS K S++GHPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 329 FILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL 388
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH+ K T +WR +F+ Y+ TMP YY
Sbjct: 389 FKVHKAKPTLKWRQSFESYLKTMPPYY 415
Score = 193 (73.0 bits), Expect = 5.3e-137, Sum P(3) = 5.3e-137
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 571 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 629
Query: 484 SPHK 487
+K
Sbjct: 630 PQNK 633
Score = 140 (54.3 bits), Expect = 1.3e-90, Sum P(3) = 1.3e-90
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 231 STAWHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
S WH+C KLIYV + + G P+G WP+PESFWPD + +L
Sbjct: 250 SQPWHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTL 290
Score = 119 (46.9 bits), Expect = 3.3e-129, Sum P(3) = 3.3e-129
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI DSME LSYSV+SYLK++ QAK E DR
Sbjct: 413 PYYLGPLKKAVRMMGAP-----NLIADSMEYGLSYSVISYLKKLSQQAKIESDR 461
Score = 41 (19.5 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPS 417
+VH + + GN+Q+Y+ +PS
Sbjct: 570 QVHSVPIAQ--MGNYQEYLKQVPS 591
>UNIPROTKB|F1RK31 [details] [associations]
symbol:INTS6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032039 "integrator complex" evidence=IEA] [GO:0016180
"snRNA processing" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] GO:GO:0015629 GO:GO:0032039
GeneTree:ENSGT00390000016655 GO:GO:0016180 OMA:EQCAEEN
EMBL:CU041247 Ensembl:ENSSSCT00000010282 Uniprot:F1RK31
Length = 879
Score = 609 (219.4 bits), Expect = 5.3e-137, Sum P(3) = 5.3e-137
Identities = 117/186 (62%), Positives = 145/186 (77%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T LG +L+ FD+LN+NR+ +GID YGQGR+PFFLEPA
Sbjct: 56 AGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPA 115
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQRD--MGV-- 139
+I+ ITDG KL+ +GVQ++ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+ M V
Sbjct: 116 IIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVES 175
Query: 140 -----VACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
V D+S I MCEVTGGRSY V S RML QC++SLVQKVQSGVVINFEK GPDP
Sbjct: 176 EQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPS 235
Query: 195 PINESK 200
P+ + +
Sbjct: 236 PVEDGQ 241
Score = 581 (209.6 bits), Expect = 5.3e-137, Sum P(3) = 5.3e-137
Identities = 99/147 (67%), Positives = 121/147 (82%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G P+G WP+PESFWPD + +LPPR++HP VKF+CT +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 269 GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQ 328
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
+IL RK P CWQV+V+NS K S++GHPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 329 FILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL 388
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH+ K T +WR +F+ Y+ TMP YY
Sbjct: 389 FKVHKAKPTLKWRQSFESYLKTMPPYY 415
Score = 193 (73.0 bits), Expect = 5.3e-137, Sum P(3) = 5.3e-137
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 571 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 629
Query: 484 SPHK 487
+K
Sbjct: 630 PQNK 633
Score = 140 (54.3 bits), Expect = 1.3e-90, Sum P(3) = 1.3e-90
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 231 STAWHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
S WH+C KLIYV + + G P+G WP+PESFWPD + +L
Sbjct: 250 SQPWHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTL 290
Score = 119 (46.9 bits), Expect = 3.3e-129, Sum P(3) = 3.3e-129
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI DSME LSYSV+SYLK++ QAK E DR
Sbjct: 413 PYYLGPLKKAVRMMGAP-----NLIADSMEYGLSYSVISYLKKLSQQAKIESDR 461
Score = 41 (19.5 bits), Expect = 1.2e-74, Sum P(3) = 1.2e-74
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPS 417
+VH + + GN+Q+Y+ +PS
Sbjct: 570 QVHSVPIAQ--MGNYQEYLKQVPS 591
>UNIPROTKB|Q9UL03 [details] [associations]
symbol:INTS6 "Integrator complex subunit 6" species:9606
"Homo sapiens" [GO:0005515 "protein binding" evidence=IPI]
[GO:0004888 "transmembrane signaling receptor activity"
evidence=TAS] [GO:0016180 "snRNA processing" evidence=IDA]
[GO:0032039 "integrator complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR002035
PROSITE:PS50234 SMART:SM00327 GO:GO:0015629 GO:GO:0004888
GO:GO:0032039 eggNOG:NOG276796 HOGENOM:HOG000015308
HOVERGEN:HBG081468 GO:GO:0016180 KO:K13143 EMBL:AF097645
EMBL:AL833524 EMBL:AL354820 EMBL:AL137780 EMBL:BC013358
EMBL:BC018725 EMBL:BC032386 EMBL:BC039829 EMBL:AF141326
EMBL:AL117626 EMBL:BK005730 IPI:IPI00015922 IPI:IPI00738767
IPI:IPI00741295 PIR:T17330 RefSeq:NP_001035026.1
RefSeq:NP_001035027.1 RefSeq:NP_036273.1 UniGene:Hs.439440
ProteinModelPortal:Q9UL03 DIP:DIP-38627N IntAct:Q9UL03
MINT:MINT-4541530 STRING:Q9UL03 PhosphoSite:Q9UL03 DMDM:74753376
PaxDb:Q9UL03 PRIDE:Q9UL03 Ensembl:ENST00000311234
Ensembl:ENST00000398119 Ensembl:ENST00000442263 GeneID:26512
KEGG:hsa:26512 UCSC:uc001vfi.3 UCSC:uc001vfm.2 CTD:26512
GeneCards:GC13M051928 HGNC:HGNC:14879 HPA:HPA001552 HPA:HPA001846
MIM:604331 neXtProt:NX_Q9UL03 PharmGKB:PA27212 InParanoid:Q9UL03
OMA:EQCAEEN PhylomeDB:Q9UL03 ChiTaRS:INTS6 GenomeRNAi:26512
NextBio:48812 ArrayExpress:Q9UL03 Bgee:Q9UL03 CleanEx:HS_INTS6
Genevestigator:Q9UL03 GermOnline:ENSG00000102786 Uniprot:Q9UL03
Length = 887
Score = 609 (219.4 bits), Expect = 8.0e-137, Sum P(3) = 8.0e-137
Identities = 117/186 (62%), Positives = 145/186 (77%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T LG +L+ FD+LN+NR+ +GID YGQGR+PFFLEPA
Sbjct: 64 AGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPA 123
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQRD--MGV-- 139
+I+ ITDG KL+ +GVQ++ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+ M V
Sbjct: 124 IIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGTMSVES 183
Query: 140 -----VACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
V D+S I MCEVTGGRSY V S RML QC++SLVQKVQSGVVINFEK GPDP
Sbjct: 184 EQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPS 243
Query: 195 PINESK 200
P+ + +
Sbjct: 244 PVEDGQ 249
Score = 581 (209.6 bits), Expect = 8.0e-137, Sum P(3) = 8.0e-137
Identities = 99/147 (67%), Positives = 121/147 (82%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G P+G WP+PESFWPD + +LPPR++HP VKF+CT +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 277 GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQ 336
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
+IL RK P CWQV+V+NS K S++GHPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 337 FILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL 396
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH+ K T +WR +F+ Y+ TMP YY
Sbjct: 397 FKVHKAKPTLKWRQSFESYLKTMPPYY 423
Score = 193 (73.0 bits), Expect = 8.0e-137, Sum P(3) = 8.0e-137
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 579 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 637
Query: 484 SPHK 487
+K
Sbjct: 638 PQNK 641
Score = 140 (54.3 bits), Expect = 2.0e-90, Sum P(3) = 2.0e-90
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 231 STAWHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
S WH+C KLIYV + + G P+G WP+PESFWPD + +L
Sbjct: 258 SQPWHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTL 298
Score = 119 (46.9 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI DSME LSYSV+SYLK++ QAK E DR
Sbjct: 421 PYYLGPLKKAVRMMGAP-----NLIADSMEYGLSYSVISYLKKLSQQAKIESDR 469
Score = 41 (19.5 bits), Expect = 1.8e-74, Sum P(3) = 1.8e-74
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPS 417
+VH + + GN+Q+Y+ +PS
Sbjct: 578 QVHSVPIAQ--MGNYQEYLKQVPS 599
>ZFIN|ZDB-GENE-040426-1150 [details] [associations]
symbol:ddx26b "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 26B" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002035 PROSITE:PS50234 SMART:SM00327
ZFIN:ZDB-GENE-040426-1150 GO:GO:0005634 CTD:203522 eggNOG:NOG276796
HOGENOM:HOG000015308 HOVERGEN:HBG081468 OrthoDB:EOG4PVNXX
EMBL:BC054905 IPI:IPI00482018 RefSeq:NP_956728.1 UniGene:Dr.82458
ProteinModelPortal:Q7SYD9 PRIDE:Q7SYD9 GeneID:393406
KEGG:dre:393406 InParanoid:Q7SYD9 KO:K13143 NextBio:20814450
ArrayExpress:Q7SYD9 Uniprot:Q7SYD9
Length = 892
Score = 619 (223.0 bits), Expect = 1.7e-136, Sum P(3) = 1.7e-136
Identities = 118/184 (64%), Positives = 146/184 (79%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM+ELKNLQ +G+T LG AL+ FD+LN+NR+ SGID YGQGR+PFFLEP+
Sbjct: 64 AGWKENHATFMSELKNLQASGLTTLGHALRAAFDLLNLNRLVSGIDNYGQGRNPFFLEPS 123
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQ--------- 134
VI+ ITDG KL++++GV E+ +LP++SP+PGSE+T+EPFRWDQRLF+LVL+
Sbjct: 124 VIITITDGNKLTHSSGVAEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGVAVPDS 183
Query: 135 RDMGVVACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPP 194
+G V D S I MCEVTGGRSYCV + RML QC++SLVQKV SGVVI+FEK GPDPP
Sbjct: 184 EQLGSVPTDESAITQMCEVTGGRSYCVRTQRMLNQCLESLVQKVLSGVVIHFEKTGPDPP 243
Query: 195 PINE 198
I E
Sbjct: 244 VIGE 247
Score = 567 (204.7 bits), Expect = 1.7e-136, Sum P(3) = 1.7e-136
Identities = 100/147 (68%), Positives = 118/147 (80%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G PVG WPI ESFWPD + +LPPRSAHP V+F+C +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 281 GVPVGHWPISESFWPDQNSPTLPPRSAHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQ 340
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
YIL RK P +CWQVFV S K+SDV HPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 341 YILERKSPHMCWQVFVNCSGKHSDVAHPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDL 400
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH++K +WR +F+ Y+ +MP YY
Sbjct: 401 FKVHKLKPNLKWRQSFEMYLKSMPPYY 427
Score = 192 (72.6 bits), Expect = 1.7e-136, Sum P(3) = 1.7e-136
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 425 SIHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVG 482
S+H++P+ QMGNYQEYLK M +PLRE++ P R H FGNPFK DK+ MM+DEAD + V
Sbjct: 582 SLHSIPVGQMGNYQEYLKMMPSPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEAD-EFVT 640
Query: 483 GSPHK 487
G +K
Sbjct: 641 GPQNK 645
Score = 132 (51.5 bits), Expect = 9.8e-91, Sum P(3) = 9.8e-91
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 234 WHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
WH+C KLIYV + + G PVG WPI ESFWPD + +L
Sbjct: 265 WHSCHKLIYVRPNPKTGVPVGHWPISESFWPDQNSPTL 302
Score = 115 (45.5 bits), Expect = 2.1e-128, Sum P(3) = 2.1e-128
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++AL MG P +LI D+M+ LSYSV+SYLK++ QAK E DR
Sbjct: 425 PYYLLPLKKALRMMGAP-----NLISDNMDCGLSYSVISYLKKLSQQAKIESDR 473
Score = 43 (20.2 bits), Expect = 8.2e-121, Sum P(3) = 8.2e-121
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 406 GNFQKYIGTMPS 417
GN+Q+Y+ MPS
Sbjct: 592 GNYQEYLKMMPS 603
>FB|FBgn0261383 [details] [associations]
symbol:IntS6 "Integrator 6" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0034472 "snRNA 3'-end processing" evidence=IDA] [GO:0016180
"snRNA processing" evidence=ISS] [GO:0032039 "integrator complex"
evidence=ISS] InterPro:IPR002035 PROSITE:PS50234 SMART:SM00327
GO:GO:0034472 EMBL:AY052093 ProteinModelPortal:Q960F1 PRIDE:Q960F1
FlyBase:FBgn0261383 InParanoid:Q960F1 OrthoDB:EOG4DV425
ArrayExpress:Q960F1 Bgee:Q960F1 Uniprot:Q960F1
Length = 1284
Score = 652 (234.6 bits), Expect = 6.0e-119, Sum P(4) = 6.0e-119
Identities = 136/259 (52%), Positives = 173/259 (66%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T +G +L++ FD+LN+NRMQSGIDTYGQGR PF+LEP+
Sbjct: 67 AGWKENHATFMNELKNLQSHGLTSMGESLRNAFDLLNLNRMQSGIDTYGQGRCPFYLEPS 126
Query: 84 VIVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVL--------QR 135
VI+VITDGG+ S GV ++ LP+ + IPG++ T+EPFRWDQRLFSLVL +R
Sbjct: 127 VIIVITDGGRYSYRNGVHQEIILPLSNQIPGTKFTKEPFRWDQRLFSLVLRMPGNKIDER 186
Query: 136 DMGVVACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPPP 195
G V D+SPI+ MCEVTGGRSY V SH +L QCI+SLVQKVQ GVV+ FE + P
Sbjct: 187 VDGKVPHDDSPIERMCEVTGGRSYRVRSHYVLNQCIESLVQKVQPGVVLQFEPMLP---- 242
Query: 196 INESKYLTLXXXXXXXXXXXXXTPV--GTGGAMNIINSTAWHNCRKLIYVPRS-AQKGFP 252
E+ T P G G A +I+ +H +K+IYV + QK FP
Sbjct: 243 -KEATSATAGEAAGASTISGMGIPSTSGAGPAPDIV----FHPVKKMIYVQKHITQKTFP 297
Query: 253 VGFWPIPESFWPDITASSL 271
+G+WP+PE +WPD A +L
Sbjct: 298 IGYWPLPEPYWPDSKAITL 316
Score = 370 (135.3 bits), Expect = 6.0e-119, Sum P(4) = 6.0e-119
Identities = 66/152 (43%), Positives = 94/152 (61%)
Query: 272 KGFPVGFWPIPESFWPDITASSLPPRSAHPNVK-FTCTSQDPLVIENLPFDKYELEPSPL 330
K FP+G+WP+PE +WPD A +LPPR AHP +K T +P ++ + P DKYE+E PL
Sbjct: 294 KTFPIGYWPLPEPYWPDSKAITLPPRDAHPKLKVLTPAVDEPQLVRSFPVDKYEIEGCPL 353
Query: 331 TQYILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLID 390
T IL +++ CWQV V N ++ PFGYLKA+ N S V+L+V+ YNYPALLP++
Sbjct: 354 TLQILNKREMNKCWQVIVTNGMHGFEL--PFGYLKAAPNFSQVHLYVLAYNYPALLPILH 411
Query: 391 DFFKVHRMKVTPEWRGNFQKYIGTMPSYYAAY 422
D + M + F Y+ ++P YY +
Sbjct: 412 DLIHKYNMSPPSDLMYKFNAYVRSIPPYYCPF 443
Score = 195 (73.7 bits), Expect = 6.0e-119, Sum P(4) = 6.0e-119
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 427 HTMPISQMGNYQEYLKRMAAPLREVESTPVRQHMFGNPFKIDKRM-MVDEADI 478
H +PI++MGNYQEYLK PLRE+E T VRQHMFGNP+K DK M MVDEAD+
Sbjct: 599 HCLPIAEMGNYQEYLKNKDNPLREIEPTNVRQHMFGNPYKKDKHMVMVDEADL 651
Score = 90 (36.7 bits), Expect = 7.3e-106, Sum P(3) = 7.3e-106
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 518 IPKHVQP-LRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDE 569
IP + P LR+AL+ + +P + Q L+P++++N LS ++ + LK +K AK +
Sbjct: 436 IPPYYCPFLRKALVNINVPYQLLQFLLPENVDNYLSPTIANQLKHIKNTAKQD 488
Score = 40 (19.1 bits), Expect = 6.0e-119, Sum P(4) = 6.0e-119
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 512 KRKPGPIPKHVQPLRRA 528
KRK GP+P+ + RR+
Sbjct: 734 KRKAGPLPRSFE-FRRS 749
Score = 38 (18.4 bits), Expect = 1.7e-102, Sum P(4) = 1.7e-102
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 463 NPFKIDKRMMVDE 475
NPF I +R +V+E
Sbjct: 566 NPFDIPRRDLVEE 578
>UNIPROTKB|B3KQH5 [details] [associations]
symbol:INTS6 "Integrator complex subunit 6, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] GO:GO:0005634 GO:GO:0015629
EMBL:CH471075 HOGENOM:HOG000015308 HOVERGEN:HBG081468 EMBL:AL354820
EMBL:AL137780 UniGene:Hs.439440 HGNC:HGNC:14879 ChiTaRS:INTS6
EMBL:AK074946 EMBL:AK096696 EMBL:AK128795 IPI:IPI00947494
STRING:B3KQH5 Ensembl:ENST00000497989 Uniprot:B3KQH5
Length = 709
Score = 581 (209.6 bits), Expect = 3.8e-96, Sum P(3) = 3.8e-96
Identities = 99/147 (67%), Positives = 121/147 (82%)
Query: 273 GFPVGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQ 332
G P+G WP+PESFWPD + +LPPR++HP VKF+CT +P+VI+ LPFDKYELEPSPLTQ
Sbjct: 99 GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPLTQ 158
Query: 333 YILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDF 392
+IL RK P CWQV+V+NS K S++GHPFGYLKAST L+ VNLFVMPYNYP LLPL+DD
Sbjct: 159 FILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPLLDDL 218
Query: 393 FKVHRMKVTPEWRGNFQKYIGTMPSYY 419
FKVH+ K T +WR +F+ Y+ TMP YY
Sbjct: 219 FKVHKAKPTLKWRQSFESYLKTMPPYY 245
Score = 215 (80.7 bits), Expect = 3.8e-96, Sum P(3) = 3.8e-96
Identities = 42/61 (68%), Positives = 48/61 (78%)
Query: 140 VACDNSPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKIGPDPPPINES 199
V D+S I MCEVTGGRSY V S RML QC++SLVQKVQSGVVINFEK GPDP P+ +
Sbjct: 11 VPLDDSAITPMCEVTGGRSYSVCSPRMLNQCLESLVQKVQSGVVINFEKAGPDPSPVEDG 70
Query: 200 K 200
+
Sbjct: 71 Q 71
Score = 193 (73.0 bits), Expect = 3.8e-96, Sum P(3) = 3.8e-96
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 401 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 459
Query: 484 SPHK 487
+K
Sbjct: 460 PQNK 463
Score = 140 (54.3 bits), Expect = 1.1e-39, Sum P(3) = 1.1e-39
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 231 STAWHNCRKLIYVPRSAQKGFPVGFWPIPESFWPDITASSL 271
S WH+C KLIYV + + G P+G WP+PESFWPD + +L
Sbjct: 80 SQPWHSCHKLIYVRPNPKTGVPIGHWPVPESFWPDQNSPTL 120
Score = 119 (46.9 bits), Expect = 2.3e-88, Sum P(3) = 2.3e-88
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI DSME LSYSV+SYLK++ QAK E DR
Sbjct: 243 PYYLGPLKKAVRMMGAP-----NLIADSMEYGLSYSVISYLKKLSQQAKIESDR 291
Score = 41 (19.5 bits), Expect = 6.4e-24, Sum P(3) = 6.4e-24
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPS 417
+VH + + GN+Q+Y+ +PS
Sbjct: 400 QVHSVPIAQ--MGNYQEYLKQVPS 421
>DICTYBASE|DDB_G0277953 [details] [associations]
symbol:ints6 "integrator complex subunit 6"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002035
PROSITE:PS50234 SMART:SM00327 dictyBase:DDB_G0277953 GO:GO:0005634
GenomeReviews:CM000152_GR EMBL:AAFI02000023 eggNOG:NOG276796
KO:K13143 RefSeq:XP_642029.2 ProteinModelPortal:Q54Z23
EnsemblProtists:DDB0233765 GeneID:8621240 KEGG:ddi:DDB_G0277953
ProtClustDB:CLSZ2445182 Uniprot:Q54Z23
Length = 1107
Score = 405 (147.6 bits), Expect = 2.2e-79, Sum P(3) = 2.2e-79
Identities = 79/172 (45%), Positives = 120/172 (69%)
Query: 25 GWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPAV 84
GWK+N +F+ E+KNLQ M+ LG +L+ +FD LN R+QS ID YGQGR+P+F+EPA+
Sbjct: 65 GWKDNFNSFIQEVKNLQTKDMSNLGFSLQKSFDFLNQFRVQSSIDNYGQGRNPWFIEPAI 124
Query: 85 IVVITDGGKLSNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQRDMGVVACDN 144
I+++TDG L+N++ + E+F LP S+ T EPFRWDQRLFS+VL+ G ++ +
Sbjct: 125 IILLTDGSSLTNSSSIIENFTLPKTQFHLNSDPTSEPFRWDQRLFSIVLK--FGGISSNK 182
Query: 145 S---PIDA----MCEVTGGRSYCVTSHRMLLQCIDSLVQKVQSGVVINFEKI 189
S P++ MC+VTGGR T+ + ++Q ++ L+QK+Q GVV++FE +
Sbjct: 183 SLPLPMEPAIAPMCDVTGGRCQVATNMKTMIQQVEGLMQKLQGGVVVSFEPL 234
Score = 364 (133.2 bits), Expect = 2.2e-79, Sum P(3) = 2.2e-79
Identities = 68/144 (47%), Positives = 95/144 (65%)
Query: 276 VGFWPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIENLPFDKYELEPSPLTQYIL 335
VGFWPIPE ++PDIT+ SLP R AHP ++++ D + EN PFDKYELEP PLTQY+L
Sbjct: 265 VGFWPIPEGYYPDITSLSLPMRLAHPVIRYSIIEADTHIPENFPFDKYELEPCPLTQYLL 324
Query: 336 ARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDFFKV 395
K C VF+ NS + S G PFG L+ ++ ++VNLFV PYN+P L L++D
Sbjct: 325 TNKIQ--CTHVFMMNSLQVSGQGEPFGCLRLNSAGNSVNLFVFPYNFPRLWILLEDLTTT 382
Query: 396 HRMKVTPEWRGNFQKYIGTMPSYY 419
+M + +W+ F+ Y+ ++P YY
Sbjct: 383 FKMMPSQKWKQEFEGYLLSIPPYY 406
Score = 95 (38.5 bits), Expect = 2.2e-79, Sum P(3) = 2.2e-79
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 425 SIHTMPISQMGNYQEYLKRMAAPLREVESTPV-RQHMFGNPFKIDKR----MMVDEAD 477
S H +PISQMGNY E + + LR+++ +FGNP++ +K M +DEAD
Sbjct: 608 SKHHLPISQMGNYHETIGKRET-LRDIDDDKKPNTPLFGNPYRKEKSNQRYMSIDEAD 664
Score = 84 (34.6 bits), Expect = 4.6e-50, Sum P(3) = 4.6e-50
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 253 VGFWPIPESFWPDITASSL 271
VGFWPIPE ++PDIT+ SL
Sbjct: 265 VGFWPIPEGYYPDITSLSL 283
Score = 58 (25.5 bits), Expect = 1.7e-75, Sum P(3) = 1.7e-75
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQA--KDEFDR 572
P ++ PLR AL R S +LIPD++++ + + +K++K Q+ K E +R
Sbjct: 404 PYYINPLRGALKRF-----CSLNLIPDNIDSQFINFINNTIKKIKSQSISKMESER 454
Score = 38 (18.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 176 QKVQSGVVINFEKIGPDPPP 195
Q Q+ VI+ P PPP
Sbjct: 833 QPTQTSSVISSSSSPPPPPP 852
>UNIPROTKB|G5E9X1 [details] [associations]
symbol:INTS6 "Integrator complex subunit 6, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] GO:GO:0005634 GO:GO:0015629
EMBL:CH471075 EMBL:AL354820 EMBL:AL137780 UniGene:Hs.439440
HGNC:HGNC:14879 ChiTaRS:INTS6 ProteinModelPortal:G5E9X1
Ensembl:ENST00000490542 ArrayExpress:G5E9X1 Bgee:G5E9X1
Uniprot:G5E9X1
Length = 571
Score = 423 (154.0 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 75/107 (70%), Positives = 89/107 (83%)
Query: 313 LVIENLPFDKYELEPSPLTQYILARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLST 372
+VI+ LPFDKYELEPSPLTQ+IL RK P CWQV+V+NS K S++GHPFGYLKAST L+
Sbjct: 1 MVIDKLPFDKYELEPSPLTQFILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNC 60
Query: 373 VNLFVMPYNYPALLPLIDDFFKVHRMKVTPEWRGNFQKYIGTMPSYY 419
VNLFVMPYNYP LLPL+DD FKVH+ K T +WR +F+ Y+ TMP YY
Sbjct: 61 VNLFVMPYNYPVLLPLLDDLFKVHKAKPTLKWRQSFESYLKTMPPYY 107
Score = 193 (73.0 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 263 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 321
Query: 484 SPHK 487
+K
Sbjct: 322 PQNK 325
Score = 119 (46.9 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 519 PKHVQPLRRALIRMGMPAAISQSLIPDSMENSLSYSVLSYLKRMKIQAKDEFDR 572
P ++ PL++A+ MG P +LI DSME LSYSV+SYLK++ QAK E DR
Sbjct: 105 PYYLGPLKKAVRMMGAP-----NLIADSMEYGLSYSVISYLKKLSQQAKIESDR 153
>WB|WBGene00000994 [details] [associations]
symbol:dic-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR002035 SMART:SM00327
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0040011 GO:GO:0048477
GO:GO:0007281 EMBL:FO080903 eggNOG:NOG276796
GeneTree:ENSGT00390000016655 ProteinModelPortal:B7WN63 PaxDb:B7WN63
PRIDE:B7WN63 EnsemblMetazoa:F08B4.1b WormBase:F08B4.1b
HOGENOM:HOG000021673 OMA:HADIASF ArrayExpress:B7WN63 Uniprot:B7WN63
Length = 872
Score = 218 (81.8 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 53/146 (36%), Positives = 75/146 (51%)
Query: 279 WPIPESFWPDITASSLPPRSAHPNVKFTCTSQDPLVIE-NLPFDKYELEPSPLTQYIL-- 335
WPIPESF+P T LP R++HP V PL I LP DK ELEP ++ I+
Sbjct: 293 WPIPESFFPMRTMDQLPQRTSHP-VILCAPIALPLHIRPELPVDKLELEPGGISDIIMEI 351
Query: 336 --ARKQPTICWQVFVANSYKNSDVGHPFGYLKASTNLSTVNLFVMPYNYPALLPLIDDFF 393
RK T+ W +S N PFG L+ +T + + L +MP+N+P L L+++
Sbjct: 352 LQGRKDMTV-WTYMEGSS--NGPTA-PFGCLRMNTLGTGITLILMPFNFPMLYSLVEEIV 407
Query: 394 KVHRMKVTPEWRGNFQKYIGTMPSYY 419
K + + WR + Y T+P YY
Sbjct: 408 KEPFLNKSQVWRSKLESYFHTVPFYY 433
Score = 212 (79.7 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 56/164 (34%), Positives = 84/164 (51%)
Query: 36 ELKNLQCT-GMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPAVIVVITDGGKL 94
E+K L G L A+ F VL+++R+Q+GID G GR EP ++++TDG
Sbjct: 82 EIKKLHLPYGSCQLHHAILEAFKVLHVSRVQTGIDGVGIGRLISNTEPVTMILLTDG--- 138
Query: 95 SNATGVQEDFNLPMHSPIPGSEMTREPFRWDQRLFSLVLQ----------RDMGVVACDN 144
S G+ DF L P GSEMTR+ FRWDQ+ +++V + + + D
Sbjct: 139 SGVAGIPIDFRLFFDPPFLGSEMTRDAFRWDQKFYTVVFRIPSTPYRPTISQLTAIDIDM 198
Query: 145 SPIDAMCEVTGGRSYCVTSHRMLLQCIDSLVQKV-QSGVVINFE 187
I+ +C TGGRS+ + S R + ID L+ Q + + FE
Sbjct: 199 PVIERLCARTGGRSFSIVSPRQIQTTIDYLLAMGNQYKIGVRFE 242
Score = 91 (37.1 bits), Expect = 1.8e-36, Sum P(3) = 1.8e-36
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 426 IHTMPISQMGNYQEY----LKRMAAPLREVESTPVRQHMFGNPFKI 467
+H MP MG Y+ Y +K P+R+++ R H FGNP+K+
Sbjct: 607 LHNMPQKLMGEYEPYQAARVKYYGQPMRKIDEEKDRTHAFGNPYKL 652
Score = 54 (24.1 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 256 WPIPESFWPDITASSL 271
WPIPESF+P T L
Sbjct: 293 WPIPESFFPMRTMDQL 308
Score = 42 (19.8 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 546 SMENSLSY--SVLSYLKRMKIQAKDEFDR 572
S S+ Y +LS L R K +A++E D+
Sbjct: 451 SSSMSMFYPGQLLSNLNRFKAKAREELDQ 479
>RGD|1309480 [details] [associations]
symbol:Ints6 "integrator complex subunit 6" species:10116
"Rattus norvegicus" [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0032039
"integrator complex" evidence=IEA] InterPro:IPR002035
PROSITE:PS50234 SMART:SM00327 RGD:1309480 eggNOG:NOG276796
GeneTree:ENSGT00390000016655 EMBL:AY383679 IPI:IPI00421370
UniGene:Rn.202377 Ensembl:ENSRNOT00000035888 UCSC:RGD:1309480
NextBio:675055 Genevestigator:Q6TXH5 Uniprot:Q6TXH5
Length = 344
Score = 287 (106.1 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 51/80 (63%), Positives = 65/80 (81%)
Query: 24 AGWKENLTTFMTELKNLQCTGMTLLGAALKHTFDVLNMNRMQSGIDTYGQGRSPFFLEPA 83
AGWKEN TFM ELKNLQ G+T LG +L+ FD+LN+NR+ +GID YGQGR+PFFLEPA
Sbjct: 213 AGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPA 272
Query: 84 VIVVITDGGKLSNATGVQED 103
+I+ ITDG KL+ +GVQ++
Sbjct: 273 IIITITDGSKLTTTSGVQDE 292
>UNIPROTKB|C9J0C6 [details] [associations]
symbol:INTS6 "Integrator complex subunit 6" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] GO:GO:0005634 GO:GO:0015629 EMBL:AL354820
EMBL:AL137780 HGNC:HGNC:14879 ChiTaRS:INTS6 IPI:IPI00946979
STRING:C9J0C6 Ensembl:ENST00000425000 HOGENOM:HOG000008189
ArrayExpress:C9J0C6 Bgee:C9J0C6 Uniprot:C9J0C6
Length = 455
Score = 193 (73.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 37/64 (57%), Positives = 51/64 (79%)
Query: 426 IHTMPISQMGNYQEYLKRMAAPLREVE-STPVRQHMFGNPFKIDKR-MMVDEADIDLVGG 483
+H++PI+QMGNYQEYLK++ +PLRE++ P R H FGNPFK+DK+ MM+DEAD + V G
Sbjct: 147 VHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKKGMMIDEAD-EFVAG 205
Query: 484 SPHK 487
+K
Sbjct: 206 PQNK 209
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 573 529 0.00092 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 620 (66 KB)
Total size of DFA: 323 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.89u 0.08s 41.97t Elapsed: 00:00:30
Total cpu time: 41.89u 0.08s 41.97t Elapsed: 00:00:30
Start: Thu Aug 15 14:04:16 2013 End: Thu Aug 15 14:04:46 2013