RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11585
(2227 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 135 bits (342), Expect = 4e-36
Identities = 71/198 (35%), Positives = 98/198 (49%), Gaps = 25/198 (12%)
Query: 1202 LKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETK 1261
+ GE+ +C C KSF + L EH +R+H T GE
Sbjct: 9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTH----T--------------GEKP 49
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---Y 1318
YKCP C S L +H R HTGEKP+ C CGKSF+ R +L+ H H G Y
Sbjct: 50 YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-QRTH--TGEKPY 106
Query: 1319 QCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSY 1378
C CG+ + ++L+ H R HTGEK Y C CGK F++ + + H+ TH+ E+ +KC
Sbjct: 107 ACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPE 166
Query: 1379 CAMTFRCPRTLTEHKKTH 1396
C +F L H++TH
Sbjct: 167 CGKSFSRRDALNVHQRTH 184
Score = 134 bits (341), Expect = 5e-36
Identities = 74/210 (35%), Positives = 98/210 (46%), Gaps = 29/210 (13%)
Query: 1223 SFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMR 1282
S + S GE Y CP C SR D L +H R
Sbjct: 2 SEFGSSSSVAQ-AALEP------------------GEKPYACPECGKSFSRSDHLAEHQR 42
Query: 1283 LHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMRN 1339
HTGEKP+ C CGKSF+ ++ L RH H G Y+C CG+ + +NL+ H R
Sbjct: 43 THTGEKPYKCPECGKSFSDKKDLTRH-QRTH--TGEKPYKCPECGKSFSQRANLRAHQRT 99
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLS 1399
HTGEK Y C CGK F+Q A H+ TH+ E+ +KC C +F L H++TH +
Sbjct: 100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH--T 157
Query: 1400 DVK-HVCNTCGNEYNTRKNLLSHMKIHSTG 1428
K + C CG ++ R L H + H TG
Sbjct: 158 GEKPYKCPECGKSFSRRDALNVHQRTH-TG 186
Score = 132 bits (335), Expect = 3e-35
Identities = 71/189 (37%), Positives = 95/189 (50%), Gaps = 25/189 (13%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVN 1246
Y C +C K+++R L H H GE+ C C KSF LT H +R+H T
Sbjct: 22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTH----T--- 73
Query: 1247 QLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLK 1306
GE YKCP C S+ +L+ H R HTGEKP++C CGKSF+ HL+
Sbjct: 74 -----------GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 1307 RHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYY 1363
H H G Y+C CG+ + NL H R HTGEK Y C CGK F++ +
Sbjct: 123 AH-QRTH--TGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV 179
Query: 1364 HKFTHSEER 1372
H+ TH+ ++
Sbjct: 180 HQRTHTGKK 188
Score = 129 bits (326), Expect = 5e-34
Identities = 70/206 (33%), Positives = 94/206 (45%), Gaps = 41/206 (19%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K Y C C K + ++ +HQR H KPY+C CG S KK L H R HTGEK Y
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 1543 VCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSESS 1602
C +CG SF+Q A+L H+ +H
Sbjct: 79 KCPECGKSFSQRANLRAHQRTH-------------------------------------- 100
Query: 1603 ESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTG 1662
+ +K Y C C K + ++ HQR H KPY+C CG S + +L H R HTG
Sbjct: 101 -TGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTG 158
Query: 1663 EKKYVCQQCGASFTQWASLFYHKFSH 1688
EK Y C +CG SF++ +L H+ +H
Sbjct: 159 EKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 126 bits (320), Expect = 3e-33
Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 3/186 (1%)
Query: 635 FTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSD 693
S G++PY C CGKSF HL H +H G Y+C CG+ SD
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSD 61
Query: 694 STNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTL 753
+ H H GEK Y C CG F +++L H+ +H+ E+ + C C K + L
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 754 KEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRH 813
+ H++TH +G+ + C CG F+ N+ H + H+ E+PY C C SF + +L H
Sbjct: 122 RAHQRTH-TGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Query: 814 YKIHKG 819
+ H G
Sbjct: 181 QRTHTG 186
Score = 125 bits (317), Expect = 9e-33
Identities = 74/266 (27%), Positives = 99/266 (37%), Gaps = 86/266 (32%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKV 1335
S L GEKP++C CGKSF + S +L
Sbjct: 8 SSVAQAALEPGEKPYACPECGKSF----------------------------SRSDHLAE 39
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKT 1395
H R HTGEK Y C CGK F+ H+ TH+ E+ +KC C +F L H++T
Sbjct: 40 HQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT 99
Query: 1396 HVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTG-RPHQCDVCNAKFKLRKYLKHVSASSC 1454
H TG +P+ C C F +L
Sbjct: 100 H------------------------------TGEKPYACPECGKSFSQLAHL------RA 123
Query: 1455 HQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1514
HQ R+ + E K Y+C C K + N+ HQR H KPY
Sbjct: 124 HQ-----------------RTHTGE---KPYKCPECGKSFSREDNLHTHQR-THTGEKPY 162
Query: 1515 ECDTCGHGLSSKKSLDDHYRIHTGEK 1540
+C CG S + +L+ H R HTG+K
Sbjct: 163 KCPECGKSFSRRDALNVHQRTHTGKK 188
Score = 123 bits (311), Expect = 6e-32
Identities = 69/238 (28%), Positives = 98/238 (41%), Gaps = 58/238 (24%)
Query: 1328 TDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPR 1387
SS+ GEK Y C CGK F++ H+ TH+ E+ +KC C +F +
Sbjct: 4 FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63
Query: 1388 TLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTG-RPHQCDVCNAKFKLRKYL 1446
LT H++TH TG +P++C C F R L
Sbjct: 64 DLTRHQRTH------------------------------TGEKPYKCPECGKSFSQRANL 93
Query: 1447 KHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRS 1506
+ HQ R+ + E K Y C C K + ++ HQR
Sbjct: 94 RA------HQ-----------------RTHTGE---KPYACPECGKSFSQLAHLRAHQR- 126
Query: 1507 VHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
H KPY+C CG S + +L H R HTGEK Y C +CG SF++ +L H+ +H
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 111 bits (281), Expect = 7e-28
Identities = 69/248 (27%), Positives = 102/248 (41%), Gaps = 67/248 (27%)
Query: 1417 NLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSE 1476
+ ++ + +P+ C C F +L + HQ R+
Sbjct: 8 SSVAQAALEPGEKPYACPECGKSFSRSDHL------AEHQ-----------------RTH 44
Query: 1477 SSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIH 1536
+ E K Y+C C K +++K++ HQR H KPY+C CG S + +L H R H
Sbjct: 45 TGE---KPYKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTH 100
Query: 1537 TGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFT 1596
TGEK Y C +CG SF+Q A L H+ +H+
Sbjct: 101 TGEKPYACPECGKSFSQLAHLRAHQRTHTG------------------------------ 130
Query: 1597 ERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDH 1656
+K Y+C C K + N+ HQR H KPY+C CG S + +L+ H
Sbjct: 131 ---------EKPYKCPECGKSFSREDNLHTHQR-THTGEKPYKCPECGKSFSRRDALNVH 180
Query: 1657 YRIHTGEK 1664
R HTG+K
Sbjct: 181 QRTHTGKK 188
Score = 109 bits (276), Expect = 3e-27
Identities = 73/191 (38%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
GEK + CPEC +S+ L +H HTGEK + C C + F K L H +R H
Sbjct: 18 GEK-PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTH--- 72
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKS 358
T G + YKCP C SF + L+ H +HTGEKPY C CGKS
Sbjct: 73 -T---------------GEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKS 114
Query: 359 FPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAY 417
F L AH + H G K Y+C CG + S N H +H GEK Y C CG F+
Sbjct: 115 FSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSR 173
Query: 418 KSSLYHHRFTH 428
+ +L H+ TH
Sbjct: 174 RDALNVHQRTH 184
Score = 108 bits (272), Expect = 9e-27
Identities = 64/189 (33%), Positives = 87/189 (46%), Gaps = 23/189 (12%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
Y CP C + ++ H H+GE+ Y C C K F K L+ H +R H
Sbjct: 22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHT------- 73
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKH 668
G YKC C F++ +LR H RTHTG++PY C CGKSF H
Sbjct: 74 -------------GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120
Query: 669 LNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHH 727
L H +H G Y+C CG+ S N H H GEK Y C CG F + +L+
Sbjct: 121 LRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV 179
Query: 728 HKFSHSKER 736
H+ +H+ ++
Sbjct: 180 HQRTHTGKK 188
Score = 108 bits (272), Expect = 1e-26
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK 625
+ GE+ Y C C K F + L+EH +R H G
Sbjct: 11 AQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHT--------------------GEKP 49
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAG-FGYQC 684
YKC C F+ L H RTHTG++PY C CGKSF + +L H +H G Y C
Sbjct: 50 YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYAC 108
Query: 685 NICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCE 744
CG+ S + + H H GEK Y C CG F + +LH H+ +H+ E+ ++C C
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168
Query: 745 KKYMSPKTLKEHEQTH 760
K + L H++TH
Sbjct: 169 KSFSRRDALNVHQRTH 184
Score = 107 bits (269), Expect = 3e-26
Identities = 68/167 (40%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGY 378
Y CP C SF R + L EH +HTGEKPY C CGKSF K+ L H + H G K Y
Sbjct: 22 YACPE--CGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGEKPY 78
Query: 379 RCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTY 438
+C CG + S AN + H +H GEK Y C CG F+ + L H+ TH ++ Y C
Sbjct: 79 KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE 138
Query: 439 CERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
C + + L H + HT G+ + C CG F R L H RTH
Sbjct: 139 CGKSFSREDNLHTHQRTHT-GEKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 105 bits (264), Expect = 1e-25
Identities = 70/202 (34%), Positives = 93/202 (46%), Gaps = 24/202 (11%)
Query: 257 SELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDG 316
S A+ GEK + C C + F + L EH +R H T G
Sbjct: 7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTH----T---------------G 46
Query: 317 VRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG- 375
+ YKCP C SF L H +HTGEKPY C CGKSF + L AH + H G
Sbjct: 47 EKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ-RTHTGE 103
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYP 435
K Y C CG + S A+ + H +H GEK Y C CG F+ + +L+ H+ TH ++ Y
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK 163
Query: 436 CTYCERKYQSPKTLKEHLKVHT 457
C C + + L H + HT
Sbjct: 164 CPECGKSFSRRDALNVHQRTHT 185
Score = 104 bits (262), Expect = 2e-25
Identities = 65/220 (29%), Positives = 88/220 (40%), Gaps = 40/220 (18%)
Query: 1619 TNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQW 1678
+ + + KPY C CG S L +H R HTGEK Y C +CG SF+
Sbjct: 4 FGSSSSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 1679 ASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYA 1735
L H+ +H+ + KC E SF NL +H
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT----------------------- 99
Query: 1736 HLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLL 1794
HT ++ C CG S++ +LR H H+ K + C CGKSF ++D L
Sbjct: 100 ----------HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL 149
Query: 1795 REHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
H H+ +P+ C C F R L H RTHT K
Sbjct: 150 HTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 103 bits (260), Expect = 5e-25
Identities = 62/185 (33%), Positives = 88/185 (47%), Gaps = 3/185 (1%)
Query: 330 SFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMS 388
S ++ GEKPY C CGKSF L H + H G K Y+C CG + S
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFS 60
Query: 389 NAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKT 448
+ + H +H GEK Y C CG F+ +++L H+ TH ++ Y C C + +
Sbjct: 61 DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAH 120
Query: 449 LKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLR 508
L+ H + HT G+ + C CG F NL TH RTH ++ + C C + R +L
Sbjct: 121 LRAHQRTHT-GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV 179
Query: 509 HYTTH 513
H TH
Sbjct: 180 HQRTH 184
Score = 94.0 bits (235), Expect = 8e-22
Identities = 65/199 (32%), Positives = 87/199 (43%), Gaps = 38/199 (19%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
K Y C C K + ++ +HQR H KPY+C CG S KK L H R HTGEK Y
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 1667 VCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFIKHEDSDFVCNL 1723
C +CG SF+Q A+L H+ +H+ + C E SF +L +H
Sbjct: 79 KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT----------- 127
Query: 1724 CPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KNHICE 1782
HT ++ C CG S++ NL TH H+ K + C
Sbjct: 128 ----------------------HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP 165
Query: 1783 ICGKSFKKKDLLREHMIVH 1801
CGKSF ++D L H H
Sbjct: 166 ECGKSFSRRDALNVHQRTH 184
Score = 89.0 bits (222), Expect = 6e-20
Identities = 59/187 (31%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNL 1992
A + GEK YAC C K F R L H + H EK ++C C ++F D +L
Sbjct: 9 SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEK--PYKCPECGKSFSDKKDL 65
Query: 1993 KLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHI 2051
H R HTGEK Y C CG SF +L H +H + + C CG ++ L +H
Sbjct: 66 TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ 125
Query: 2052 RNSHTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIP--------KCHSCQKCEESFDN 2103
R +HT K C +C K+ S NL K + C +C +SF
Sbjct: 126 R-THTGEKPYKCPECGKSFS-----------REDNLHTHQRTHTGEKPYKCPECGKSFSR 173
Query: 2104 CNNLWSH 2110
+ L H
Sbjct: 174 RDALNVH 180
Score = 87.1 bits (217), Expect = 2e-19
Identities = 60/167 (35%), Positives = 81/167 (48%), Gaps = 25/167 (14%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
GEK +KCPEC +S+ + +L +H HTGEK + C C + F + L H +R H
Sbjct: 46 GEK-PYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-QRTH--- 100
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKS 358
T G + Y CP C SF + L+ H +HTGEKPY C CGKS
Sbjct: 101 -------------T---GEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS 142
Query: 359 FPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKDHLDSHRGEK 404
F + L+ H + H G K Y+C CG + S H +H G+K
Sbjct: 143 FSREDNLHTHQ-RTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188
Score = 86.0 bits (214), Expect = 6e-19
Identities = 59/215 (27%), Positives = 84/215 (39%), Gaps = 44/215 (20%)
Query: 1648 SSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCN 1704
S + GEK Y C +CG SF++ L H+ +H+ + KC E SF +
Sbjct: 4 FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63
Query: 1705 NLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANP 1764
+L H HT ++ C CG S++
Sbjct: 64 DLTRHQRT---------------------------------HTGEKPYKCPECGKSFSQR 90
Query: 1765 GNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLL 1823
NLR H H+ K + C CGKSF + LR H H+ +P+ C C F +L
Sbjct: 91 ANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLH 150
Query: 1824 QHYRTHT--KPKATNSFSSSKCEESFDNCNNLWSH 1856
H RTHT KP + +C +SF + L H
Sbjct: 151 THQRTHTGEKP-----YKCPECGKSFSRRDALNVH 180
Score = 81.3 bits (202), Expect = 2e-17
Identities = 63/225 (28%), Positives = 89/225 (39%), Gaps = 52/225 (23%)
Query: 448 TLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLL 507
+ + G+ + C CG F +L H RTH ++ + C C + ++ L
Sbjct: 8 SSVAQAALEP-GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT 66
Query: 508 RHYTTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRH 567
RH TH T G++ YKCP C + ++ + + H
Sbjct: 67 RHQRTH-T----------------------------GEK-PYKCPECGKSFSQRANLRAH 96
Query: 568 FEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYK 627
H+GE+ Y C C K F L H +R H G YK
Sbjct: 97 QRTHTGEKPYACPECGKSFSQLAHLRAH-QRTHT--------------------GEKPYK 135
Query: 628 CHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
C C F+R D+L H RTHTG++PY C CGKSF + LN H
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Score = 81.0 bits (201), Expect = 4e-17
Identities = 72/216 (33%), Positives = 87/216 (40%), Gaps = 57/216 (26%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
Y CPECG R L EH H K + C CG +F + L H R HT
Sbjct: 22 YACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQ-RTHT------ 73
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHF 272
GEK +KCPEC +S+ + L+ H HTGEK +
Sbjct: 74 --------------------------GEK-PYKCPECGKSFSQRANLRAHQRTHTGEKPY 106
Query: 273 VCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQ 332
C C + F L H +R H T G + YKCP C SF
Sbjct: 107 ACPECGKSFSQLAHLRAH-QRTH----T---------------GEKPYKCPE--CGKSFS 144
Query: 333 RFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
R + L H +HTGEKPY C CGKSF + LN H
Sbjct: 145 REDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Score = 80.6 bits (200), Expect = 5e-17
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 1920 FKCPDCPTILQTFR---GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKI 1974
+KCP+C ++F L+AH H+GEK YAC C K F + + L H + H EK
Sbjct: 78 YKCPECG---KSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEK- 132
Query: 1975 RDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
++C C ++F NL H R HTGEK Y C CG SF +LN+H +H
Sbjct: 133 -PYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 71.7 bits (177), Expect = 5e-14
Identities = 60/224 (26%), Positives = 87/224 (38%), Gaps = 44/224 (19%)
Query: 1787 SFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCE 1844
S + +P+ C C F HL +H RTHT KP + +C
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP-----YKCPECG 56
Query: 1845 ESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIVIKYAHLLVRHMKKHHTMQLSISSVSK 1904
+SF + +L H + C C K + A+L H ++ HT
Sbjct: 57 KSFSDKKDLTRHQRTHTGEKPYKCPEC---GKSFSQRANL-RAH-QRTHT---------- 101
Query: 1905 HIKSKTQIFVDGAIRFKCPDCPTILQTFR---GLKAHLDIHSGEKDYACHICNKVFVRHS 1961
G + CP+C ++F L+AH H+GEK Y C C K F R
Sbjct: 102 -----------GEKPYACPECG---KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRED 147
Query: 1962 TLENHMKAVH--EKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
L H + H EK ++C C ++F L +H R HTG+K
Sbjct: 148 NLHTHQR-THTGEK--PYKCPECGKSFSRRDALNVHQRTHTGKK 188
Score = 67.1 bits (165), Expect = 2e-12
Identities = 75/265 (28%), Positives = 99/265 (37%), Gaps = 87/265 (32%)
Query: 89 YLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYV 147
GE ++C EC KSF+ L EH ++ HT
Sbjct: 8 SSVAQAA-LEPGEKPYACPECGKSFSRSDHLAEH-QRTHT-------------------- 45
Query: 148 EGVVKYKCPECGFMVKRF---QGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRR 204
G YKCPECG K F + L H H K + C CG +F L+ H R
Sbjct: 46 -GEKPYKCPECG---KSFSDKKDLTRH-QRTHTGEKPYKCPECGKSFSQRANLRAHQ-RT 99
Query: 205 HTVNILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLA 264
HT GEK + CPEC +S+ + L+ H
Sbjct: 100 HT--------------------------------GEK-PYACPECGKSFSQLAHLRAHQR 126
Query: 265 VHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPH 324
HTGEK + C C + F ++ L+ H +R H T G + YKCP
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTH-QRTH----------------T---GEKPYKCPE 166
Query: 325 PGCPSSFQRFNALQEHMLSHTGEKP 349
C SF R +AL H +HTG+K
Sbjct: 167 --CGKSFSRRDALNVHQRTHTGKKT 189
Score = 62.5 bits (153), Expect = 7e-11
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 19/103 (18%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVN 1246
Y C +C K++++ L+ H H GE+ C C KSF + L H +R+H
Sbjct: 106 YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH-QRTHT------- 157
Query: 1247 QLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKP 1289
GE YKCP C SR D+L H R HTG+K
Sbjct: 158 -----------GEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 61.7 bits (151), Expect = 1e-10
Identities = 71/229 (31%), Positives = 93/229 (40%), Gaps = 66/229 (28%)
Query: 71 GEIKFQCPDCHTMMKNF---AYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLH 126
GE + CP+C K+F +L +H R H+GE + C EC KSF+ KK L H ++ H
Sbjct: 18 GEKPYACPECG---KSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRH-QRTH 72
Query: 127 TIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIV 186
T G YKCPECG + LR H H K + C
Sbjct: 73 T---------------------GEKPYKCPECGKSFSQRANLRAH-QRTHTGEKPYACPE 110
Query: 187 CGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKC 246
CG +F L+ H R HT GEK +KC
Sbjct: 111 CGKSFSQLAHLRAHQ-RTHT--------------------------------GEK-PYKC 136
Query: 247 PECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
PEC +S+ L H HTGEK + C C + F ++ LN H +R H
Sbjct: 137 PECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH-QRTH 184
Score = 55.5 bits (135), Expect = 2e-08
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 1985 AFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKN 2043
+ F + + GEK Y C CG SF L H +H + + C CG ++ +
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 2044 PKSLDSHIRNSHTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIP--------KCHSCQ 2095
K L H R +HT K C +C K+ S + +NL K ++C
Sbjct: 62 KKDLTRHQR-THTGEKPYKCPECGKSFS-----------QRANLRAHQRTHTGEKPYACP 109
Query: 2096 KCEESFDNCNNLWSH 2110
+C +SF +L +H
Sbjct: 110 ECGKSFSQLAHLRAH 124
Score = 49.0 bits (118), Expect = 3e-06
Identities = 63/207 (30%), Positives = 80/207 (38%), Gaps = 71/207 (34%)
Query: 71 GEIKFQCPDCHTMMKNF---AYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLH 126
GE ++CP+C K+F L +H R H+GE + C EC KSF+ + LR H ++ H
Sbjct: 46 GEKPYKCPECG---KSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAH-QRTH 100
Query: 127 TIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRF---QGLREHIVSVHAQVKDHV 183
T G Y CPECG K F LR H H K +
Sbjct: 101 T---------------------GEKPYACPECG---KSFSQLAHLRAH-QRTHTGEKPYK 135
Query: 184 CIVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKVK 243
C CG +F L TH R HT GEK
Sbjct: 136 CPECGKSFSREDNLHTHQ-RTHT--------------------------------GEK-P 161
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEK 270
+KCPEC +S+ L H HTG+K
Sbjct: 162 YKCPECGKSFSRRDALNVHQRTHTGKK 188
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 109 bits (275), Expect = 6e-28
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH--FNNIH-- 1313
G + +CP C L+ H R HTGEKPF C CGK + +E+L H N ++
Sbjct: 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 1314 MKVGYQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKF-THSEER 1372
+V + C+VC L++HM +HTGE Y C C + F Q H HS
Sbjct: 64 EQV-FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Query: 1373 S 1373
S
Sbjct: 123 S 123
Score = 100 bits (252), Expect = 8e-25
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMRN- 1339
+G C C K F ++ +LK H N H G ++C CG+ NL H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH-NRKH--TGEKPFECPKCGKCYFRKENLLEHEARN 58
Query: 1340 --HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHK-KTH 1396
+ E+ + C +C + F + H +H+ E +KCS C+ F + L H K H
Sbjct: 59 CMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 93.3 bits (233), Expect = 3e-22
Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 38/154 (24%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQK 1571
EC TC SK L H R HTGEK + C +CG + + +L H
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH----------- 54
Query: 1572 HVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSV 1631
E S++++ C +C++ R + H
Sbjct: 55 -------------------------EARNCMNRSEQVFTCSVCQETFRRRMELRLHMV-S 88
Query: 1632 HELLKPYECDTCGHGLSSKKSLDDH-YRIHTGEK 1664
H PY+C +C KK L H ++H+G
Sbjct: 89 HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 92.6 bits (231), Expect = 5e-22
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH--YNCSHAGFG-Y 682
+C C F L++H R HTG++P+ C CGK + K++L H NC + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 683 QCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHK 729
C++C + H+ +H GE Y C C FM K L H
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114
Score = 87.6 bits (218), Expect = 3e-20
Identities = 29/152 (19%), Positives = 44/152 (28%), Gaps = 41/152 (26%)
Query: 1536 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALF 1595
+G C C F L H H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKH------------------------------- 30
Query: 1596 TERSESSESSKKIYECDICKKQVTNRKNMIDHQR--SVHELLKPYECDTCGHGLSSKKSL 1653
+ +K +EC C K ++N+++H+ ++ + + C C + L
Sbjct: 31 --------TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL 82
Query: 1654 DDHYRIHTGEKKYVCQQCGASFTQWASLFYHK 1685
H HTGE Y C C F Q L H
Sbjct: 83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114
Score = 84.5 bits (210), Expect = 3e-19
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 1920 FKCPDCPTILQTFR---GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH----E 1972
+CP C + F LK H H+GEK + C C K + R L H E
Sbjct: 8 VECPTCH---KKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64
Query: 1973 KIRDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+ F C VC F L+LHM HTGE Y C +C F+ L H
Sbjct: 65 Q--VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 83.3 bits (207), Expect = 8e-19
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 18/131 (13%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
+CP C + + S K H H+GE+ + C C KC+F K L EH +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH------EARNCMN 61
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKH 668
+ C +C F R LRLH+ +HTG+ PY C C + F+ KK
Sbjct: 62 R------------SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKD 109
Query: 669 LNRHYNCSHAG 679
L H H+G
Sbjct: 110 LQSHMIKLHSG 120
Score = 81.4 bits (202), Expect = 4e-18
Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
G +CP C + + + LK H HTGEK F C C + +F K L EH + + MN
Sbjct: 4 GSS-GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-EARNCMN 61
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKS 358
+ + C C +F+R L+ HM+SHTGE PY C +C +
Sbjct: 62 ----------------RSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQ 103
Query: 359 FPLKRRLNAHYNKWHLG 375
F K+ L +H K H G
Sbjct: 104 FMQKKDLQSHMIKLHSG 120
Score = 80.2 bits (199), Expect = 1e-17
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 344 HTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKDH---LDS 399
+G C C K F K L H N+ H G K + C CG N +H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEH-LKVHT 457
+R E+ +TC C F + L H +H + Y C+ C +++ K L+ H +K+H+
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119
Score = 78.7 bits (195), Expect = 4e-17
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNLKLHMR-- 1997
SG C C+K F+ L+ H + H EK F+C C + +F NL H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEK--PFECPKCGKCYFRKENLLEHEARN 58
Query: 1998 -IHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNSH 2055
++ E+ + C C +F L +H SH + CS C + K L SH+ H
Sbjct: 59 CMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Query: 2056 TNRK 2059
+
Sbjct: 119 SGPS 122
Score = 77.2 bits (191), Expect = 1e-16
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 648 HTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDH---LDN 703
+G C C K F++K +L H H G ++C CG+ N +H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEH 756
++ E+ +TC +C F + L H SH+ E ++CS C +++M K L+ H
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 76.0 bits (188), Expect = 3e-16
Identities = 37/162 (22%), Positives = 48/162 (29%), Gaps = 53/162 (32%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHP 325
+G C C + F K L H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH----------------------------------- 26
Query: 326 GCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH--YNKWHLG-KGYRCHI 382
R HTGEKP+ C CGK + K L H N + + + C +
Sbjct: 27 ------NR---------KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV 71
Query: 383 CGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHH 424
C T + H+ SH GE Y C +C F K L H
Sbjct: 72 CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 74.8 bits (185), Expect = 7e-16
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQR--SVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
K +EC C K ++N+++H+ ++ + + C C + L H HTGE
Sbjct: 34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEM 93
Query: 1541 KYVCQQCGASFTQWASLFYHK 1561
Y C C F Q L H
Sbjct: 94 PYKCSSCSQQFMQKKDLQSHM 114
Score = 74.1 bits (183), Expect = 1e-15
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYR---IHTGE 1663
EC C K+ ++ + H R H KP+EC CG K++L +H ++ E
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64
Query: 1664 KKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFIKH 1714
+ + C C +F + L H SH+ KC F +L SHM H
Sbjct: 65 QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 72.9 bits (180), Expect = 4e-15
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHR-- 761
G C C F+ K L H H+ E+ F+C C K Y + L EHE +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 762 SGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRH-YKIHKG 819
+ C C F R + H H+ E PY C C+ F +KK L H K+H G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 71.4 bits (176), Expect = 1e-14
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYR---IHTGE 1539
EC C K+ ++ + H R H KP+EC CG K++L +H ++ E
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64
Query: 1540 KKYVCQQCGASFTQWASLFYHKFSH 1564
+ + C C +F + L H SH
Sbjct: 65 QVFTCSVCQETFRRRMELRLHMVSH 89
Score = 68.3 bits (168), Expect = 1e-13
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLS 1399
+G C C K F H H+ E+ F+C C + L EH+ + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM- 60
Query: 1400 DVKH------VCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYL 1446
+ C+ C + R L HM H+ P++C C+ +F +K L
Sbjct: 61 ---NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDL 110
Score = 67.9 bits (167), Expect = 2e-13
Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 50/130 (38%)
Query: 1187 YKCSDCDKTYTRFYELKCH---LMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVT 1243
++C C K Y R L H ++R E+ +C++C ++F +
Sbjct: 36 FECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM--------------- 80
Query: 1244 RVNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAARE 1303
L+ HM HTGE P+ C C + F ++
Sbjct: 81 --------------------------------ELRLHMVSHTGEMPYKCSSCSQQFMQKK 108
Query: 1304 HLKRHFNNIH 1313
L+ H +H
Sbjct: 109 DLQSHMIKLH 118
Score = 66.4 bits (163), Expect = 6e-13
Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 25/137 (18%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVT 1464
C TC ++ ++ L H + H+ +P +C C + ++ L H+
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLE------HE-------- 55
Query: 1465 AKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLS 1524
S++++ C +C++ R + H H PY+C +C
Sbjct: 56 ---------ARNCMNRSEQVFTCSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFM 105
Query: 1525 SKKSLDDH-YRIHTGEK 1540
KK L H ++H+G
Sbjct: 106 QKKDLQSHMIKLHSGPS 122
Score = 66.4 bits (163), Expect = 8e-13
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQK 1695
EC TC SK L H R HTGEK + C +CG + + +L H+ + R+++
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65
Query: 1696 ------CEESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHT 1747
C+E+F L HM + + C+ C S+ ++ L HM K H+
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC---SQQFMQKKDLQ-SHMIKLHS 119
Score = 54.4 bits (132), Expect = 1e-08
Identities = 29/144 (20%), Positives = 44/144 (30%), Gaps = 34/144 (23%)
Query: 1660 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFIKHED 1716
+G C C F L H H+ + +C + + NL H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHE------ 55
Query: 1717 SDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSN 1776
+ +Q CS C ++ LR HMV H+
Sbjct: 56 ------------------------ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91
Query: 1777 -KNHICEICGKSFKKKDLLREHMI 1799
+ C C + F +K L+ HMI
Sbjct: 92 EMPYKCSSCSQQFMQKKDLQSHMI 115
Score = 50.2 bits (121), Expect = 4e-07
Identities = 34/148 (22%), Positives = 48/148 (32%), Gaps = 42/148 (28%)
Query: 153 YKCPECGFMVKRFQ---GLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTH--YIRRHTV 207
+CP C K+F L+ H H K C CG + L H +
Sbjct: 8 VECPTCH---KKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR- 62
Query: 208 NILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHT 267
E+V F C C ++ EL+ H+ HT
Sbjct: 63 -------------------------------SEQV-FTCSVCQETFRRRMELRLHMVSHT 90
Query: 268 GEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
GE + CS C + F K L H ++H
Sbjct: 91 GEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 47.1 bits (113), Expect = 4e-06
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 14/119 (11%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYR---THT--KPKAT 1835
C C K F K L+ H H+ +PF C C + +++LL+H + +
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV--- 66
Query: 1836 NSFSSSKCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIVIKYAHLLVRHMKKHHT 1894
F+ S C+E+F L HM + C+ C S+ ++ L HM K H+
Sbjct: 67 --FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSC---SQQFMQKKD-LQSHMIKLHS 119
Score = 45.6 bits (109), Expect = 1e-05
Identities = 38/142 (26%), Positives = 54/142 (38%), Gaps = 32/142 (22%)
Query: 71 GEIKFQCPDCHTMMKNF---AYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREH--YKK 124
G +CP CH K F YLK H R H+GE F C +C K + K+ L EH
Sbjct: 4 GSSGVECPTCH---KKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNC 59
Query: 125 LHTIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVC 184
++ + C C +R LR H+V H + C
Sbjct: 60 MNR---------------------SEQVFTCSVCQETFRRRMELRLHMV-SHTGEMPYKC 97
Query: 185 IVCGAAFGLARRLKTHYIRRHT 206
C F + L++H I+ H+
Sbjct: 98 SSCSQQFMQKKDLQSHMIKLHS 119
Score = 45.6 bits (109), Expect = 1e-05
Identities = 37/177 (20%), Positives = 57/177 (32%), Gaps = 60/177 (33%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCP 156
SG + C C K F +K L+ H + HT G ++CP
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH-NRKHT---------------------GEKPFECP 39
Query: 157 ECGFMVKRFQGLREH--IVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQAN 214
+CG R + L EH ++ + C VC F L+ H HT
Sbjct: 40 KCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM-VSHT-------- 90
Query: 215 HDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKH-LAVHTGEK 270
GE +KC C + + +L+ H + +H+G
Sbjct: 91 ------------------------GEM-PYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 41.0 bits (97), Expect = 5e-04
Identities = 36/204 (17%), Positives = 60/204 (29%), Gaps = 92/204 (45%)
Query: 1805 RPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEESFDNCNNLWSHMFIKHE 1862
C C+ F + +L H R HT KP F KC + + N
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKP-----FECPKCGKCYFRKEN---------- 50
Query: 1863 NSDFVCNLCPPDSKIVIKYAHLLVRHMKKHHTMQLSISSVSKHIKSKTQIFVDGAIRFKC 1922
L+ H ++ + + F C
Sbjct: 51 ----------------------LLEHEARNCM----------NRSEQV---------FTC 69
Query: 1923 PDCPTILQTFR---GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQC 1979
C +TFR L+ H+ H+GE Y C C++ F++ L++HM
Sbjct: 70 SVCQ---ETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM------------ 114
Query: 1980 KVCDRAFFDVYNLKLHMRIHTGEK 2003
+++H+G
Sbjct: 115 ----------------IKLHSGPS 122
Score = 37.1 bits (87), Expect = 0.010
Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 34/118 (28%)
Query: 1999 HTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNS--H 2055
+G C TC F+ L +HN H + F C CG Y ++L H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 2056 TNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIPKCHSCQKCEESFDNCNNLWSHMFI 2113
+ + C C + +F L HM
Sbjct: 62 RSEQVFTCSVCQE-------------------------------TFRRRMELRLHMVS 88
Score = 36.3 bits (85), Expect = 0.023
Identities = 22/117 (18%), Positives = 35/117 (29%), Gaps = 32/117 (27%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTSG 459
G C TC F K L H H ++ + C C
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKC-------------------- 41
Query: 460 DVRHICQTCGSEFHTRKNLLTHIR---THNTDRTHVCELCNANLKTRRSLLRHYTTH 513
G + ++NLL H + +++ C +C + R L H +H
Sbjct: 42 ---------GKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSH 89
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 111 bits (280), Expect = 8e-28
Identities = 45/204 (22%), Positives = 72/204 (35%), Gaps = 33/204 (16%)
Query: 1205 HLMVHRGERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKY 1262
+ + C+ C ++ + +L H H GE +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKH------------------TGEKPF 43
Query: 1263 KC--PLCPSITSRYDSLQQHMRLHTGEKPFSC--QVCGKSFAAREHLKRHFNNIHM---K 1315
C C + L +H HTGEK F+C C F + ++K+HFN
Sbjct: 44 PCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN-RFHNIKI 102
Query: 1316 VGYQCNV--CGRVLTDSSNLKVHMRNHTGEKKYVC--EICGKGFTQWASHYYHKFTHSEE 1371
Y C+ CG+ + LKVH +HT + Y C E C K F+ + H+ H+
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162
Query: 1372 RSFKCSYCAMTFRCPRTLTEHKKT 1395
K C+ + +H
Sbjct: 163 PCKKDDSCSFVGKTWTLYLKHVAE 186
Score = 107 bits (269), Expect = 2e-26
Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 22/187 (11%)
Query: 1279 QHMRLHTGEKPFSCQV--CGKSFAAREHLKRHFNNIHMKVG---YQCN--VCGRVLTDSS 1331
L K + C CG ++ L+ H H G + C C + T
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKH--TGEKPFPCKEEGCEKGFTSLH 58
Query: 1332 NLKVHMRNHTGEKKYVCE--ICGKGFTQWASHYYHKFTHSEERS--FKCSY--CAMTFRC 1385
+L H HTGEK + C+ C FT A+ H + + C + C F+
Sbjct: 59 HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKK 118
Query: 1386 PRTLTEHKKTHVLSDVK-HVCN--TCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFK- 1441
L H+ +H + + C C ++ L H K+H+ + D C+ K
Sbjct: 119 HNQLKVHQFSH--TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKT 176
Query: 1442 LRKYLKH 1448
YLKH
Sbjct: 177 WTLYLKH 183
Score = 104 bits (263), Expect = 2e-25
Identities = 49/201 (24%), Positives = 72/201 (35%), Gaps = 38/201 (18%)
Query: 1186 RYKCS--DCDKTYTRFYELKCHLMVHRGERTMSCT--MCDKSFYQVSRLTEHYKRSHRMK 1241
RY CS DC Y + ++L+ HL H GE+ C C+K F + LT H +H
Sbjct: 12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLTH--- 67
Query: 1242 VTRVNQLKKKSEICIEGETKYKC--PLCPSITSRYDSLQQHMRLHTGEK--PFSCQV--C 1295
GE + C C + ++++H K + C C
Sbjct: 68 ---------------TGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC 112
Query: 1296 GKSFAAREHLKRHFNNIHMKVG---YQCN--VCGRVLTDSSNLKVHMRNHTGEKKYVCEI 1350
GK+F LK H H Y+C C + + S LK H + H G +
Sbjct: 113 GKAFKKHNQLKVH-QFSH--TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDS 169
Query: 1351 CGKGFTQWASHYYHKF-THSE 1370
C W + H H +
Sbjct: 170 CSFVGKTWTLYLKHVAECHQD 190
Score = 96.1 bits (240), Expect = 2e-22
Identities = 43/210 (20%), Positives = 65/210 (30%), Gaps = 53/210 (25%)
Query: 1501 IDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQ--CGASFTQWAS 1556
+ + + + K Y C CG + L H HTGEK + C++ C FT
Sbjct: 1 MGEKA-LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHH 59
Query: 1557 LFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECD--IC 1614
L H +H + +K + CD C
Sbjct: 60 LTRHSLTH---------------------------------------TGEKNFTCDSDGC 80
Query: 1615 KKQVTNRKNMIDHQRSVH--ELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
+ T + NM H + Y C CG L H HT + Y C
Sbjct: 81 DLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 1671 --CGASFTQWASLFYHKFSHSETRNQKCEE 1698
C F+ + L H+ H+ +K +
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYPCKKDDS 169
Score = 92.7 bits (231), Expect = 3e-21
Identities = 45/213 (21%), Positives = 57/213 (26%), Gaps = 49/213 (23%)
Query: 1483 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTG 1538
K Y C C + H H KP+ C C G +S L H HTG
Sbjct: 11 KRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69
Query: 1539 EKKYVCQQ--CGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFT 1596
EK + C C FT A++ H +
Sbjct: 70 EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK---------------------------- 101
Query: 1597 ERSESSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYEC--DTCGHGLSSKKS 1652
+Y C C K + HQ H PYEC + C S
Sbjct: 102 ---------ICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSR 151
Query: 1653 LDDHYRIHTGEKKYVCQQCGASFTQWASLFYHK 1685
L H ++H G C W H
Sbjct: 152 LKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 184
Score = 92.3 bits (230), Expect = 4e-21
Identities = 53/209 (25%), Positives = 72/209 (34%), Gaps = 33/209 (15%)
Query: 261 KHLAVHTGEKHFVCSV--CQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVR 318
A+ K ++CS C + +L H H G +
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKH-------------------TGEK 41
Query: 319 KYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE--ACGKSFPLKRRLNAHYNKWHLGK 376
+ C GC F + L H L+HTGEK +TC+ C F K + H+N++H K
Sbjct: 42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK 101
Query: 377 G--YRCHI--CGSTMSNAANFKDHLDSHRGEKKYTC--ETCGTGFAYKSSLYHHRFTHIK 430
Y CH CG K H SH + Y C E C F+ S L H H
Sbjct: 102 ICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161
Query: 431 DRTYPCTYCER--KYQSPKTLKEHLKVHT 457
C K + LK + H
Sbjct: 162 YPCKKDDSCSFVGKTWT-LYLKHVAECHQ 189
Score = 90.0 bits (224), Expect = 3e-20
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 16/189 (8%)
Query: 644 HVRTHTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFG-YQCN--ICGRVMSDSTNFK 698
+ Y C CG ++ L H C H G + C C + + +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 699 DHLDNHKGEKKYTCE--ICGTGFMYKSSLHHHKFSHS--KERMFQCSF--CEKKYMSPKT 752
H H GEK +TC+ C F K+++ H K ++ C F C K +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 753 LKEHEQTHRSGDIKHIC--DTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSL 810
LK H+ +H + + + C + C F+ + RH KVH+ + C+ K
Sbjct: 122 LKVHQFSH-TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY 180
Query: 811 VRHYK-IHK 818
++H H+
Sbjct: 181 LKHVAECHQ 189
Score = 88.4 bits (220), Expect = 7e-20
Identities = 49/211 (23%), Positives = 74/211 (35%), Gaps = 40/211 (18%)
Query: 567 HFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVT 624
+ ++Y CS C + +L H H G
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHT--------------------GEK 41
Query: 625 KYKCH--ICDSIFTRYDSLRLHVRTHTGDRPYTCD--VCGKSFVAKKHLNRHYNCSHAG- 679
+ C C+ FT L H THTG++ +TCD C F K ++ +H+N
Sbjct: 42 PFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN-RFHNI 100
Query: 680 --FGYQCNI--CGRVMSDSTNFKDHLDNHKGEKKYTC--EICGTGFMYKSSLHHHKFSHS 733
Y C+ CG+ K H +H + Y C E C F S L H+ H+
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160
Query: 734 ---KERMFQCSFCEKKYMSPKTLKEHEQTHR 761
++ CSF K + LK + H+
Sbjct: 161 GYPCKKDDSCSFVGKTWTL--YLKHVAECHQ 189
Score = 86.9 bits (216), Expect = 3e-19
Identities = 40/234 (17%), Positives = 60/234 (25%), Gaps = 60/234 (25%)
Query: 1336 HMRNHTGEKKYVCEI--CGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHK 1393
K+Y+C CG + + H H+ E+ F C
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG------------- 49
Query: 1394 KTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCD--VCNAKFKLRKYLKHVSA 1451
C + + +L H H+ + CD C+ +F + +K
Sbjct: 50 --------------CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK--- 92
Query: 1452 SSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHE 1509
H +Y C C K + HQ H
Sbjct: 93 ---HFNR------------------FHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHT 130
Query: 1510 LLKPYEC--DTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHK 1561
PYEC + C S L H ++H G C W H
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 184
Score = 84.2 bits (209), Expect = 2e-18
Identities = 46/217 (21%), Positives = 74/217 (34%), Gaps = 39/217 (17%)
Query: 1625 IDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQ--CGASFTQWAS 1680
+ + + + K Y C CG + L H HTGEK + C++ C FT
Sbjct: 1 MGEKA-LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHH 59
Query: 1681 LFYHKFSHSETRNQKCEESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLER 1740
L H +H+ +N C+ D C+ F + +++
Sbjct: 60 LTRHSLTHTGEKNFTCDS--DGCDL----RFTTKAN---------------------MKK 92
Query: 1741 HMKKHH---TMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KNHIC--EICGKSFKKKDLL 1794
H + H C CG ++ L+ H H+ + C E C K F L
Sbjct: 93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRL 152
Query: 1795 REHMIVHSTLRPFLCEFCNAGFKCRKHLLQHY-RTHT 1830
+ H VH+ + C+ K L+H H
Sbjct: 153 KRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 82.6 bits (205), Expect = 9e-18
Identities = 48/202 (23%), Positives = 68/202 (33%), Gaps = 34/202 (16%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCS--VCQRGFFMKNRLNEHYKRV 294
K ++ C +C +Y +L+ HL HTGEK F C C++GF + L H
Sbjct: 9 VYK-RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH-SLT 66
Query: 295 HHMNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEK--PYTC 352
H G + + C GC F +++H K Y C
Sbjct: 67 H-------------------TGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVC 107
Query: 353 --EACGKSFPLKRRLNAHYNKWHLG-KGYRCH--ICGSTMSNAANFKDHLDSHRGEKKYT 407
E CGK+F +L H H Y C C S + K H H G
Sbjct: 108 HFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 166
Query: 408 CETCGTGFAYKSSL-YHHRFTH 428
++C + H H
Sbjct: 167 DDSCSFVGKTWTLYLKHVAECH 188
Score = 80.3 bits (199), Expect = 5e-17
Identities = 43/183 (23%), Positives = 66/183 (36%), Gaps = 25/183 (13%)
Query: 1937 AHLDIHSGEKDYACHI--CNKVFVRHSTLENHMKAVHEKIRDFQCK--VCDRAFFDVYNL 1992
+ K Y C C + ++ L+ H+ H + F CK C++ F +++L
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHL 60
Query: 1993 KLHMRIHTGEKKYVCE--TCGASFVHWGSLNIHNYSHI---NAQFVCSF--CGNTYKNPK 2045
H HTGEK + C+ C F ++ H +VC F CG +K
Sbjct: 61 TRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN 120
Query: 2046 SLDSHIRNSHTNRKKSIC--DDCTKAMSTPAPSSKSVCIEHS-----NLIPKCHSCQKCE 2098
L H SHT + C + C K S S H K SC
Sbjct: 121 QLKVHQF-SHTQQLPYECPHEGCDKRF-----SLPSRLKRHEKVHAGYPCKKDDSCSFVG 174
Query: 2099 ESF 2101
+++
Sbjct: 175 KTW 177
Score = 76.1 bits (188), Expect = 1e-15
Identities = 45/148 (30%), Positives = 57/148 (38%), Gaps = 17/148 (11%)
Query: 1935 LKAHLDIHSGEKDYACH--ICNKVFVRHSTLENHMKAVH--EKIRDFQCK--VCDRAFFD 1988
L+AHL H+GEK + C C K F L H H EK +F C CD F
Sbjct: 30 LQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSL-THTGEK--NFTCDSDGCDLRFTT 86
Query: 1989 VYNLKLHMRIHTGEKK--YVC--ETCGASFVHWGSLNIHNYSHINAQ-FVCS--FCGNTY 2041
N+K H K YVC E CG +F L +H +SH + C C +
Sbjct: 87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF 146
Query: 2042 KNPKSLDSHIRNSHTNRKKSICDDCTKA 2069
P L H + H D C+
Sbjct: 147 SLPSRLKRHEK-VHAGYPCKKDDSCSFV 173
Score = 69.9 bits (172), Expect = 2e-13
Identities = 41/185 (22%), Positives = 58/185 (31%), Gaps = 39/185 (21%)
Query: 340 HMLSHTGEKPYTCEA--CGKSFPLKRRLNAHYNKWHLG-KGYRCH--ICGSTMSNAANFK 394
K Y C CG ++ +L AH K H G K + C C ++ +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCK-HTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 395 DHLDSHRGEKKYTCE--TCGTGFAYKSSLYHHRFTHI--KDRTYPCTYCERKYQSPKTLK 450
H +H GEK +TC+ C F K+++ H K Y C +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFEN---------- 111
Query: 451 EHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC--ELCNANLKTRRSLLR 508
CG F L H +H + C E C+ L R
Sbjct: 112 -----------------CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154
Query: 509 HYTTH 513
H H
Sbjct: 155 HEKVH 159
Score = 64.5 bits (158), Expect = 1e-11
Identities = 42/172 (24%), Positives = 65/172 (37%), Gaps = 40/172 (23%)
Query: 549 YKC--PLCDRIYTSFSETKRHFEVHSGERKYTCS--ICSKCFFIKNRLSEHYRRVH---K 601
+ C C++ +TS RH H+GE+ +TC C F K + +H K
Sbjct: 43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKH-FNRFHNIK 101
Query: 602 MRVSMARTNDVKKSAEISVDGVTKYKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTC--D 657
+ V Y CH C F +++ L++H +HT PY C +
Sbjct: 102 ICV---------------------YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHE 140
Query: 658 VCGKSFVAKKHLNRHYNCSHAGFG----YQCNICGRVMSDSTNFKDHLDNHK 705
C K F L RH HAG+ C+ G+ + K + H+
Sbjct: 141 GCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYL--KHVAECHQ 189
Score = 64.2 bits (157), Expect = 2e-11
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Query: 1935 LKAHLDIHSGEKD--YACHI--CNKVFVRHSTLENHMKAVH--EKIRDFQCK--VCDRAF 1986
+K H + K Y CH C K F +H+ L+ H H + ++C CD+ F
Sbjct: 90 MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQL--PYECPHEGCDKRF 146
Query: 1987 FDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
LK H ++H G ++C W H
Sbjct: 147 SLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183
Score = 62.6 bits (153), Expect = 7e-11
Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 56/192 (29%)
Query: 1483 KIYECD--ICKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTG 1538
K + C C+K T+ ++ H H K + CD C ++K ++ H+
Sbjct: 41 KPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99
Query: 1539 EKK--YVC--QQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKAL 1594
K YVC + CG +F + L H+FSH
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSH------------------------------ 129
Query: 1595 FTERSESSESSKKIYEC--DICKKQVTNRKNMIDHQRSVH---ELLKPYECDTCGHGLSS 1649
+ + YEC + C K+ + + H++ VH K C G +
Sbjct: 130 ---------TQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTL 179
Query: 1650 KKSLDDHYRIHT 1661
L H
Sbjct: 180 --YLKHVAECHQ 189
Score = 56.1 bits (136), Expect = 1e-08
Identities = 48/216 (22%), Positives = 74/216 (34%), Gaps = 42/216 (19%)
Query: 1770 HMVVHS-NKNHICEI--CGKSFKKKDLLREHMIVHSTLRPFLCE--FCNAGFKCRKHLLQ 1824
+ K +IC CG ++ K L+ H+ H+ +PF C+ C GF HL +
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 1825 HYRTHT--KPKATNSFSSSKCEESFDNCNNLWSHMFIKHENSD--FVCNL--CPPDSKIV 1878
H THT K +S C+ F N+ H H +VC+ C K
Sbjct: 63 HSLTHTGEKNFTCDS---DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC---GKAF 116
Query: 1879 IKYAHLLVRHMKKHHTMQLSISSVSKHIKSKTQIFVDGAIRFKC--PDCPTILQTFRGLK 1936
K+ L H + HT + ++C C LK
Sbjct: 117 KKHNQL-KVH-QFSHT---------------------QQLPYECPHEGCDKRFSLPSRLK 153
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHE 1972
H +H+G C+ V + H+ H+
Sbjct: 154 RHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 55.7 bits (135), Expect = 1e-08
Identities = 45/238 (18%), Positives = 70/238 (29%), Gaps = 64/238 (26%)
Query: 452 HLKVHTSGDVRHICQT--CGSEFHTRKNLLTHIRTHNTDRTHVCE--LCNANLKTRRSLL 507
+ R+IC CG+ ++ L H+ H ++ C+ C + L
Sbjct: 3 EKALPV-VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 508 RHYTTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYKC--PLCDRIYTSFSETK 565
RH TH G++ + C CD +T+ + K
Sbjct: 62 RHSLTH-----------------------------TGEK-NFTCDSDGCDLRFTTKANMK 91
Query: 566 RHFEVHSGERK--YTCSI--CSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVD 621
+HF + Y C C K F N+L H + H
Sbjct: 92 KHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSHT-------------------- 130
Query: 622 GVTKYKCH--ICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSH 677
Y+C CD F+ L+ H + H G D C +H H
Sbjct: 131 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 55.3 bits (134), Expect = 2e-08
Identities = 49/291 (16%), Positives = 68/291 (23%), Gaps = 113/291 (38%)
Query: 92 KHVRDNHSGET-FSCD--ECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVE 148
+ C +C ++ L+ H HT
Sbjct: 2 GEKA-LPVVYKRYICSFADCGAAYNKNWKLQAH-LCKHT--------------------- 38
Query: 149 GVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVN 208
G + C E G C F L H HT
Sbjct: 39 GEKPFPCKEEG---------------------------CEKGFTSLHHLTRHS-LTHT-- 68
Query: 209 ILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPE--CPRSYGNFSELKKHLAVH 266
GEK F C C + + +KKH
Sbjct: 69 ------------------------------GEK-NFTCDSDGCDLRFTTKANMKKHFNRF 97
Query: 267 TGEKH--FVCSV--CQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKC 322
K +VC C + F N+L H + H T Y+C
Sbjct: 98 HNIKICVYVCHFENCGKAFKKHNQLKVH-QFSH----T---------------QQLPYEC 137
Query: 323 PHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWH 373
PH GC F + L+ H H G ++C H + H
Sbjct: 138 PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 50.7 bits (122), Expect = 8e-07
Identities = 43/264 (16%), Positives = 72/264 (27%), Gaps = 87/264 (32%)
Query: 396 HLDSHRGEKKYTCET--CGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHL 453
K+Y C CG + L H H ++ +PC
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKE--------------- 47
Query: 454 KVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCE--LCNANLKTRRSLLRHYT 511
+ C F + +L H TH ++ C+ C+ T+ ++ +H+
Sbjct: 48 ------------EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95
Query: 512 THGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIK-YKCPL--CDRIYTSFSETKRHF 568
+I Y C C + + ++ K H
Sbjct: 96 RF-----------------------------HNIKICVYVCHFENCGKAFKKHNQLKVHQ 126
Query: 569 EVHSGERKYTCS--ICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKY 626
H+ + Y C C K F + +RL H +VH G
Sbjct: 127 FSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHA--------------------GYPCK 165
Query: 627 KCHICDSIFTRYDSLRLHV-RTHT 649
K C + + HV H
Sbjct: 166 KDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 32.6 bits (75), Expect = 0.88
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 26/91 (28%)
Query: 89 YLKKHVRDNHSGET-FSCDE--CSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMV 145
LK H +H+ + + C C K F+ L+ H +K+H
Sbjct: 121 QLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVHA------------------ 160
Query: 146 YVEGVVKYKCPECGFMVKRFQGLREHIVSVH 176
G K C F+ K + +H+ H
Sbjct: 161 ---GYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 31.8 bits (73), Expect = 1.8
Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 30/125 (24%)
Query: 89 YLKKHVRDNHSGE-TFSCDE--CSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMV 145
+L +H H+GE F+CD C FTTK +++H
Sbjct: 59 HLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKH-FNRFH------------------ 98
Query: 146 YVEGVVKYKC--PECGFMVKRFQGLREHIVSVHAQVKDHVC--IVCGAAFGLARRLKTHY 201
+ Y C CG K+ L+ H H Q + C C F L RLK H
Sbjct: 99 -NIKICVYVCHFENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHE 156
Query: 202 IRRHT 206
+ H
Sbjct: 157 -KVHA 160
Score = 31.0 bits (71), Expect = 2.8
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 17/62 (27%)
Query: 896 CEESFSDSKFLDAHVNIEHGKRVH-GDDEFECYQCNQCGVELYLGREAF---LNHMRHIH 951
C++ FS L H ++VH G + C+ G + + L H+ H
Sbjct: 142 CDKRFSLPSRLKRH------EKVHAGYPCKKDDSCSFVG-------KTWTLYLKHVAECH 188
Query: 952 SD 953
D
Sbjct: 189 QD 190
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 105 bits (265), Expect = 8e-27
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSN 1332
+K F C+ CG+ F +L H H Y C++C + +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTH--TDERPYTCDICHKAFRRQDH 60
Query: 1333 LKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
L+ H H+ EK + C+ CGKGF Q + HK H + S +
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 83.6 bits (208), Expect = 3e-19
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTL 1389
SS +K+++C+ CG+ FT+ + H+ TH++ER + C C FR L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 1390 TEHKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
+H+ H S K C CG + + L H +H
Sbjct: 62 RDHRYIH--SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 82.1 bits (204), Expect = 1e-18
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKD 395
L +K + C+ CG+ F L H + H + Y C IC + +D
Sbjct: 5 SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
H H EK + C+ CG GF +L H+ H++ +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 81.7 bits (203), Expect = 2e-18
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAG-FGYQCNICGRVMSDSTNFK 698
+ + C CG+ F +L H +H Y C+IC + + +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLR 62
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
DH H EK + C+ CG GF +L HK H + +
Sbjct: 63 DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 78.2 bits (194), Expect = 3e-17
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 1934 GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYN 1991
G +K++ C C + F + L H + H E+ + C +C +AF +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHER-THTDER--PYTCDICHKAFRRQDH 60
Query: 1992 LKLHMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
L+ H IH+ EK + C+ CG F +L +H
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 77.9 bits (193), Expect = 4e-17
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
K + C C + T N++ H+R H +PY CD C + L DH IH+ EK +
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 1667 VCQQCGASFTQWASLFYHKFSHSETRNQKC 1696
CQ+CG F Q +L HK H +T +
Sbjct: 75 KCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 76.7 bits (190), Expect = 1e-16
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K + C C + T N++ H+R H +PY CD C + L DH IH+ EK +
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF 74
Query: 1543 VCQQCGASFTQWASLFYHKFSH 1564
CQ+CG F Q +L HK H
Sbjct: 75 KCQECGKGFCQSRTLAVHKTLH 96
Score = 70.2 bits (173), Expect = 2e-14
Identities = 31/162 (19%), Positives = 42/162 (25%), Gaps = 75/162 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVN 1246
+ C C + +T+ Y L H H ER +C +C K+F +
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD------------------ 59
Query: 1247 QLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLK 1306
L+ H +H+ EKPF CQ CGK F
Sbjct: 60 -----------------------------HLRDHRYIHSKEKPFKCQECGKGF------- 83
Query: 1307 RHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGEKKYVC 1348
S L VH H
Sbjct: 84 ---------------------CQSRTLAVHKTLHMQTSSPTA 104
Score = 70.2 bits (173), Expect = 2e-14
Identities = 24/144 (16%), Positives = 42/144 (29%), Gaps = 41/144 (28%)
Query: 1499 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1558
+ + K + C CG + +L H R HT E+ Y C C +F + L
Sbjct: 4 GSSGGRL-PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 1559 YHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQV 1618
H++ H S +K ++C C K
Sbjct: 63 DHRYIH---------------------------------------SKEKPFKCQECGKGF 83
Query: 1619 TNRKNMIDHQRSVHELLKPYECDT 1642
+ + H+ +H +
Sbjct: 84 CQSRTLAVHKT-LHMQTSSPTAAS 106
Score = 68.6 bits (169), Expect = 8e-14
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 1920 FKCPDCPTILQTFR---GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRD 1976
F C C + F L H H+ E+ Y C IC+K F R L +H +H K +
Sbjct: 18 FICKFCG---RHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY-IHSKEKP 73
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCET 2009
F+C+ C + F L +H +H +
Sbjct: 74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106
Score = 67.5 bits (166), Expect = 2e-13
Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 21/107 (19%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK 625
++++ C C + F L H R H
Sbjct: 7 GGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHT--------------------DERP 45
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
Y C IC F R D LR H H+ ++P+ C CGK F + L H
Sbjct: 46 YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 66.7 bits (164), Expect = 4e-13
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 22/112 (19%)
Query: 257 SELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDG 316
S +K F+C C R F L H +R H
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTH-------------------TD 42
Query: 317 VRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
R Y C C +F+R + L++H H+ EKP+ C+ CGK F R L H
Sbjct: 43 ERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 65.1 bits (160), Expect = 1e-12
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGY 378
+ C C F + L H +HT E+PYTC+ C K+F + L H H K +
Sbjct: 18 FICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPF 74
Query: 379 RCHICGSTMSNAANFKDHLDSHRGEKKYTCET 410
+C CG + H H T +
Sbjct: 75 KCQECGKGFCQSRTLAVHKTLHMQTSSPTAAS 106
Score = 64.0 bits (157), Expect = 3e-12
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 694 STNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTL 753
S+ K +K++ C+ CG F +L H+ +H+ ER + C C K + L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 754 KEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
++H H S + C CG F + + H +H
Sbjct: 62 RDHRYIH-SKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 63.6 bits (156), Expect = 4e-12
Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 27/128 (21%)
Query: 1417 NLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSE 1476
T + C C F L H+ R+
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLI------HE-----------------RTH 40
Query: 1477 SSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIH 1536
+ E + Y CDIC K + ++ DH+ +H KP++C CG G ++L H +H
Sbjct: 41 TDE---RPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Query: 1537 TGEKKYVC 1544
Sbjct: 97 MQTSSPTA 104
Score = 60.9 bits (149), Expect = 3e-11
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 722 KSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKN 781
S + ++ F C FC + + L HE+TH + + + CD C F + +
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH-TDERPYTCDICHKAFRRQDH 60
Query: 782 MLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ H +HS E+P+ C+ C F + ++L H +H
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98
Score = 60.9 bits (149), Expect = 4e-11
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 23/116 (19%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
+K +F C C R + L H HT E+ + C +C + F ++ L +H + +H
Sbjct: 14 TKK-EFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIH--- 68
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+ +KC C F + L H H T +
Sbjct: 69 ----------------SKEKPFKCQE--CGKGFCQSRTLAVHKTLHMQTSSPTAAS 106
Score = 59.0 bits (144), Expect = 2e-10
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 1738 LERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLRE 1796
+ ++ +C +CG + NL H H++ + + C+IC K+F+++D LR+
Sbjct: 5 SSGG-RLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
H +HS +PF C+ C GF + L H H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSS 101
Score = 56.7 bits (138), Expect = 1e-09
Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 21/108 (19%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
+ C C R +T H H+ ER YTC IC K F ++ L +H R +H
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHS------- 69
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC C F + +L +H H T
Sbjct: 70 -------------KEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 52.8 bits (128), Expect = 3e-08
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 14/100 (14%)
Query: 1766 NLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQ 1824
+ K IC+ CG+ F K L H H+ RP+ C+ C+ F+ + HL
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 1825 HYRTHT--KPKATNSFSSSKCEE---SFDNCNNLWSHMFI 1859
H H+ KP KC+E F L H +
Sbjct: 64 HRYIHSKEKP--------FKCQECGKGFCQSRTLAVHKTL 95
Score = 50.5 bits (122), Expect = 2e-07
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1652 SLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWS 1708
+K+++C+ CG FT+ +L H+ +H++ R C+ +F ++L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 1709 HMFI 1712
H +I
Sbjct: 64 HRYI 67
Score = 40.5 bits (96), Expect = 6e-04
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 418 KSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKN 477
S R + + C +C R + L H + HT + + C C F + +
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHT-DERPYTCDICHKAFRRQDH 60
Query: 478 LLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTH 513
L H H+ ++ C+ C R+L H T H
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Score = 39.3 bits (93), Expect = 0.001
Identities = 23/123 (18%), Positives = 34/123 (27%), Gaps = 35/123 (28%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
+ C CG + L H H + + C +C AF L+ H H+
Sbjct: 18 FICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHR-YIHS------ 69
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHF 272
EK FKC EC + + L H +H
Sbjct: 70 --------------------------KEK-PFKCQECGKGFCQSRTLAVHKTLHMQTSSP 102
Query: 273 VCS 275
+
Sbjct: 103 TAA 105
Score = 34.3 bits (80), Expect = 0.066
Identities = 26/119 (21%), Positives = 36/119 (30%), Gaps = 26/119 (21%)
Query: 89 YLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYV 147
+ F C C + FT L H ++ HT
Sbjct: 4 GSSGGRL-PSKTKKEFICKFCGRHFTKSYNLLIH-ERTHT-------------------- 41
Query: 148 EGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
Y C C +R LR+H +H++ K C CG F +R L H H
Sbjct: 42 -DERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVHK-TLHM 97
Score = 32.8 bits (76), Expect = 0.26
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
E + C CH + +L+ H HS E F C EC K F + L H K LH
Sbjct: 42 DERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVH-KTLHM 97
Score = 31.3 bits (72), Expect = 0.78
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 24/90 (26%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIR 129
+ +F C C L H R H+ E ++CD C K+F + LR+H + +H+
Sbjct: 14 TKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDH-RYIHS-- 69
Query: 130 IRSSREENDMKKKTMVYVEGVVKYKCPECG 159
+KC ECG
Sbjct: 70 -------------------KEKPFKCQECG 80
Score = 30.5 bits (70), Expect = 1.4
Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 31/133 (23%)
Query: 448 TLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLL 507
IC+ CG F NLL H RTH +R + C++C+ + + L
Sbjct: 4 GSSGGRLPSK-TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 508 RHYTTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRH 567
H H ++ +KC C + + H
Sbjct: 63 DHRYIH-----------------------------SKEK-PFKCQECGKGFCQSRTLAVH 92
Query: 568 FEVHSGERKYTCS 580
+H T +
Sbjct: 93 KTLHMQTSSPTAA 105
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 103 bits (260), Expect = 1e-25
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 1259 ETKYKCPLCPSITSRYDSLQQHM---RLHTGEKPFSCQVCG-----KSFAAREHLKRHFN 1310
ET + C + L H+ +H K F C G + F A+ L
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLV---- 56
Query: 1311 NIHMKV--G---YQCNV--CGRVLTDSSNLKVHMRNHTGEKKYVCE--ICGKGFTQWASH 1361
+HM+ G ++C C + + NLK H+R+HTGEK Y+CE C K F+ +
Sbjct: 57 -VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDR 115
Query: 1362 YYHKF-THSEERSFKCSY--CAMTFRCPRTLTEHKKTH 1396
H+ THS E+ + C C + P +L +H KT
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 99.6 bits (249), Expect = 5e-24
Identities = 42/173 (24%), Positives = 66/173 (38%), Gaps = 38/173 (21%)
Query: 1187 YKCSDCDKTYTRFYELKCHLM---VHRGERTMSCTMCD-----KSFYQVSRLTEHYKRSH 1238
+ C + + +L H+ +H + C + F L H R H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-MRRH 62
Query: 1239 RMKVTRVNQLKKKSEICIEGETKYKCPL--CPSITSRYDSLQQHMRLHTGEKPFSCQ--V 1294
GE +KC C SR ++L+ H+R HTGEKP+ C+
Sbjct: 63 ------------------TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG 104
Query: 1295 CGKSFAAREHLKRHFNNIHMKVG---YQCNV--CGRVLTDSSNLKVHMRNHTG 1342
C K+F+ +H N H Y C + C + TD S+L+ H++ G
Sbjct: 105 CSKAFSNASDRAKHQNRTHS--NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 92.7 bits (231), Expect = 1e-21
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 18/156 (11%)
Query: 1287 EKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVL-----TDSSNLKVHMR 1338
E C + F ++E L H N+ H+ + C+ G L VHMR
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 1339 NHTGEKKYVCEI--CGKGFTQWASHYYHKFTHSEERSFKCSY--CAMTFRCPRTLTEHKK 1394
HTGEK + C C K +++ + H +H+ E+ + C + C+ F +H+
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 1395 -THVLSDVK-HVCNT--CGNEYNTRKNLLSHMKIHS 1426
TH S+ K +VC C Y +L H+K
Sbjct: 121 RTH--SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 90.7 bits (226), Expect = 6e-21
Identities = 52/193 (26%), Positives = 73/193 (37%), Gaps = 51/193 (26%)
Query: 244 FKCPECPRSYGNFSELKKHLA---VHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFT 300
+ C + + + +L H+ +H K FVC ++ Y V HM
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELR-PFKAQYMLVVHM--- 59
Query: 301 SRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE--ACGKS 358
RR T G + +KC GC S+ R L+ H+ SHTGEKPY CE C K+
Sbjct: 60 ------RRHT-----GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA 108
Query: 359 FPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLD-SHRGEKKYTCET--CGTGF 415
F SNA++ H + +H EK Y C+ C +
Sbjct: 109 F----------------------------SNASDRAKHQNRTHSNEKPYVCKLPGCTKRY 140
Query: 416 AYKSSLYHHRFTH 428
SSL H T
Sbjct: 141 TDPSSLRKHVKTV 153
Score = 78.8 bits (195), Expect = 8e-17
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 18/145 (12%)
Query: 1945 EKDYACHICNKVFVRHSTLENHMKAVH----EKIRDFQCKVCD-----RAFFDVYNLKLH 1995
E D C++ F L +H+ + H K +F C R F Y L +H
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERK--EFVCHWGGCSRELRPFKAQYMLVVH 58
Query: 1996 MRIHTGEKKYVC--ETCGASFVHWGSLNIHNYSHINAQ-FVCSF--CGNTYKNPKSLDSH 2050
MR HTGEK + C E C S+ +L H SH + ++C C + N H
Sbjct: 59 MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH 118
Query: 2051 IRNSHTNRKKSICD--DCTKAMSTP 2073
+H+N K +C CTK + P
Sbjct: 119 QNRTHSNEKPYVCKLPGCTKRYTDP 143
Score = 77.2 bits (191), Expect = 3e-16
Identities = 40/181 (22%), Positives = 64/181 (35%), Gaps = 48/181 (26%)
Query: 574 ERKYTCSICSKCFFIKNRLSEHYR--RVHKMRVSMARTNDVKKSAEISVDGVTKYKCHIC 631
E CS+ F + +L H +H ++ CH
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHG--------------------ERKEFVCHWG 40
Query: 632 DSI-----FTRYDSLRLHVRTHTGDRPYTCDV--CGKSFVAKKHLNRH---------YNC 675
F L +H+R HTG++P+ C C KS+ ++L H Y C
Sbjct: 41 GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100
Query: 676 SHAGFGYQCNICGRVMSDSTNFKDHLDN-HKGEKKYTCEI--CGTGFMYKSSLHHHKFSH 732
H G C + S++++ H + H EK Y C++ C + SSL H +
Sbjct: 101 EHEG-------CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Query: 733 S 733
Sbjct: 154 H 154
Score = 75.7 bits (187), Expect = 8e-16
Identities = 37/202 (18%), Positives = 61/202 (30%), Gaps = 58/202 (28%)
Query: 626 YKCHICDSIFTRYDSLRLHV---RTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGY 682
+ C F + L H+ H + + C G
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------- 41
Query: 683 QCNICGRVMSDSTNFKDHLDNHKGEKKYTCEI--CGTGFMYKSSLHHHKFSHSKERMFQC 740
C+ R H+ H GEK + C C + +L H SH+ E+ + C
Sbjct: 42 -CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100
Query: 741 SFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRH-TKVHSTERPYICEY 799
+ C F+ + +H + HS E+PY+C+
Sbjct: 101 EH---------------------------EGCSKAFSNASDRAKHQNRTHSNEKPYVCKL 133
Query: 800 --CNVSFKEKKSLVRHYKIHKG 819
C + + SL +H K G
Sbjct: 134 PGCTKRYTDPSSLRKHVKTVHG 155
Score = 73.4 bits (181), Expect = 7e-15
Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 16/154 (10%)
Query: 347 EKPYTCEACGKSFPLKRRLNAHYNKWHLGKG---YRCHICGSTM-----SNAANFKDHLD 398
E + C + F + +L H N H+ + CH G + H+
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 399 SHRGEKKYTC--ETCGTGFAYKSSLYHHRFTHIKDRTYPCTY--CERKYQSPKTLKEHLK 454
H GEK + C E C ++ +L H +H ++ Y C + C + + + +H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 455 -VHTSGDVRHICQT--CGSEFHTRKNLLTHIRTH 485
H+ + ++C+ C + +L H++T
Sbjct: 121 RTHS-NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 71.5 bits (176), Expect = 2e-14
Identities = 41/193 (21%), Positives = 64/193 (33%), Gaps = 52/193 (26%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRS--VHELLKPYECDTCGHGLSSKK-----SLDDHYRI 1535
D C ++ +++ ++ H S +H K + C G + L H R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 1536 HTGEKKYVC--QQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKA 1593
HTGEK + C + C S+++ +L H SH+
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT---------------------------- 93
Query: 1594 LFTERSESSESSKKIYEC--DICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSS 1649
+K Y C + C K +N + HQ H KPY C C +
Sbjct: 94 -----------GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD 142
Query: 1650 KKSLDDHYRIHTG 1662
SL H + G
Sbjct: 143 PSSLRKHVKTVHG 155
Score = 71.5 bits (176), Expect = 3e-14
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 1935 LKAHLDIHSGEKDYACHI--CNKVFVRHSTLENHMKAVH--EKIRDFQCK--VCDRAFFD 1988
L H+ H+GEK + C C K + R L+ H++ H EK + C+ C +AF +
Sbjct: 55 LVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGEK--PYMCEHEGCSKAFSN 111
Query: 1989 VYNLKLHM-RIHTGEKKYVCET--CGASFVHWGSLNIHNYSH 2027
+ H R H+ EK YVC+ C + SL H +
Sbjct: 112 ASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 70.7 bits (174), Expect = 5e-14
Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 38/180 (21%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRS--VHELLKPYECDTCGHGLSSKK-----SLDDHYRI 1659
D C ++ +++ ++ H S +H K + C G + L H R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 1660 HTGEKKYVC--QQCGASFTQWASLFYHKFSHSETRNQKCEESFDNCNNLWSHMFIKHEDS 1717
HTGEK + C + C S+++ +L H SH+ + CE + C+ +S+ S
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH--EGCSKAFSNA------S 113
Query: 1718 DFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQ--RCVCSYCGNSYANPGNLRTHMVVHS 1775
D +H + H+ ++ C C Y +P +LR H+
Sbjct: 114 D-------------------RAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 69.2 bits (170), Expect = 2e-13
Identities = 42/206 (20%), Positives = 65/206 (31%), Gaps = 64/206 (31%)
Query: 1636 KPYECDTCGHGLSSKKSLDDH---YRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETR 1692
D C S++ L H IH K++VC G S
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCS------------------ 43
Query: 1693 NQKCEESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQ-- 1750
+ F L HM HT ++
Sbjct: 44 --RELRPFKAQYMLVVHMRR---------------------------------HTGEKPH 68
Query: 1751 RCVCSYCGNSYANPGNLRTHMVVHSN-KNHICE--ICGKSFKKKDLLREHMI-VHSTLRP 1806
+C C SY+ NL+TH+ H+ K ++CE C K+F +H HS +P
Sbjct: 69 KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP 128
Query: 1807 FLCEF--CNAGFKCRKHLLQHYRTHT 1830
++C+ C + L +H +T
Sbjct: 129 YVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 68.4 bits (168), Expect = 3e-13
Identities = 40/232 (17%), Positives = 64/232 (27%), Gaps = 91/232 (39%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRN---HTGEKKYVCEICG-----KGFTQWASHYYHKFTHS 1369
+ + C + L H+ + H K++VC G + F H H+
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 1370 EERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTG- 1428
E+ KC++ C Y+ +NL +H++ H TG
Sbjct: 64 GEKPHKCTFEG---------------------------CRKSYSRLENLKTHLRSH-TGE 95
Query: 1429 RPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECD 1488
+P+ C E +
Sbjct: 96 KPYMC----------------------------------------------------EHE 103
Query: 1489 ICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTG 1538
C K +N + HQ H KPY C C + SL H + G
Sbjct: 104 GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 63.4 bits (155), Expect = 2e-11
Identities = 42/231 (18%), Positives = 66/231 (28%), Gaps = 85/231 (36%)
Query: 1343 EKKYVCEICGKGFTQWAS---HYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLS 1399
E + C + F H + H E + F C +
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------- 41
Query: 1400 DVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVP 1459
C+ + + L+ HM+ H+ +PH+C
Sbjct: 42 -----CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG---------------------- 74
Query: 1460 NKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC--D 1517
C+K + +N+ H RS H KPY C +
Sbjct: 75 ------------------------------CRKSYSRLENLKTHLRS-HTGEKPYMCEHE 103
Query: 1518 TCGHGLSSKKSLDDH-YRIHTGEKKYVCQ--QCGASFTQWASLFYHKFSHS 1565
C S+ H R H+ EK YVC+ C +T +SL H +
Sbjct: 104 GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 62.6 bits (153), Expect = 3e-11
Identities = 48/205 (23%), Positives = 68/205 (33%), Gaps = 64/205 (31%)
Query: 153 YKCPECGFMVKRFQGLREHIVS--VHAQVKDHVCIVCGA-----AFGLARRLKTHYIRRH 205
+ C + L HI S +H + K+ VC G F L H +RRH
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-MRRH 62
Query: 206 TVNILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCP--ECPRSYGNFSELKKHL 263
T GEK KC C +SY LK HL
Sbjct: 63 T--------------------------------GEK-PHKCTFEGCRKSYSRLENLKTHL 89
Query: 264 AVHTGEKHFVC--SVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYK 321
HTGEK ++C C + F + +H R H + Y
Sbjct: 90 RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH-------------------SNEKPYV 130
Query: 322 CPHPGCPSSFQRFNALQEHMLSHTG 346
C PGC + ++L++H+ + G
Sbjct: 131 CKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 59.9 bits (146), Expect = 2e-10
Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 60/176 (34%)
Query: 652 RPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKKYT 711
D C + F +++ L H N H H K++
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHI-------------------------HGERKEFV 36
Query: 712 CEICGT-----GFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIK 766
C G F + L H H+ E+ +C+F
Sbjct: 37 CHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEG---------------------- 74
Query: 767 HICDTCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSFKEKKSLVRH-YKIHKG 819
C ++ +N+ H + H+ E+PY+CE+ C+ +F +H + H
Sbjct: 75 -----CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Score = 59.5 bits (145), Expect = 4e-10
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 1935 LKAHLDIHSGEKDYACH--ICNKVFVRHSTLENHMKAVHEKIRDFQCKV--CDRAFFDVY 1990
LK HL H+GEK Y C C+K F S H H + + CK+ C + + D
Sbjct: 85 LKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS 144
Query: 1991 NLKLHMRIHTG 2001
+L+ H++ G
Sbjct: 145 SLRKHVKTVHG 155
Score = 57.2 bits (139), Expect = 2e-09
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 44/183 (24%)
Query: 1539 EKKYVCQQCGASFTQWASLFYH-KFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTE 1597
E C F L +H H ++ V CH
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFV----CHWG---------------- 40
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDD 1655
C + + ++ H R H KP++C C S ++L
Sbjct: 41 ------------GCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKT 87
Query: 1656 HYRIHTGEKKYVCQQ--CGASFTQWASLFYHKF-SHSETR-----NQKCEESFDNCNNLW 1707
H R HTGEK Y+C+ C +F+ + H+ +HS + C + + + ++L
Sbjct: 88 HLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR 147
Query: 1708 SHM 1710
H+
Sbjct: 148 KHV 150
Score = 56.8 bits (138), Expect = 3e-09
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 26/128 (20%)
Query: 1752 CVCSYCGNSYANPGNLRTHMV---VHSN-KNHICEICG-----KSFKKKDLLREHMIVHS 1802
C C + + L H+ +H K +C G + FK + +L HM H+
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 1803 TLRPFLCEF--CNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEE-----SFDNCNNL 1853
+P C F C + ++L H R+HT KP CE +F N ++
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP--------YMCEHEGCSKAFSNASDR 115
Query: 1854 WSHMFIKH 1861
H H
Sbjct: 116 AKHQNRTH 123
Score = 53.4 bits (129), Expect = 5e-08
Identities = 45/201 (22%), Positives = 68/201 (33%), Gaps = 66/201 (32%)
Query: 465 CQTCGSEFHTRKNLLTHI---RTHNTDRTHVCELCNANLKTRR-----SLLRHYTTHGTQ 516
C EF +++ L+ HI H + VC + + R L+ H H
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRH--- 62
Query: 517 LAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYKCPL--CDRIYTSFSETKRHFEVHSGE 574
G++ +KC C + Y+ K H H+GE
Sbjct: 63 --------------------------TGEK-PHKCTFEGCRKSYSRLENLKTHLRSHTGE 95
Query: 575 RKYTC--SICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK-YKCHI- 630
+ Y C CSK F + ++H R H +N+ K Y C +
Sbjct: 96 KPYMCEHEGCSKAFSNASDRAKHQNRTH--------SNE-------------KPYVCKLP 134
Query: 631 -CDSIFTRYDSLRLHVRTHTG 650
C +T SLR HV+T G
Sbjct: 135 GCTKRYTDPSSLRKHVKTVHG 155
Score = 53.0 bits (128), Expect = 6e-08
Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 61/170 (35%)
Query: 549 YKCPLCD--RIYTSFSET---KRHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVHK 601
+ C R F H H+GE+ + C+ C K
Sbjct: 35 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS---------------- 78
Query: 602 MRVSMARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTC--DVC 659
++R ++L+ H+R+HTG++PY C + C
Sbjct: 79 ---------------------------------YSRLENLKTHLRSHTGEKPYMCEHEGC 105
Query: 660 GKSFVAKKHLNRHYNCSHAGFG-YQCNI--CGRVMSDSTNFKDHLDNHKG 706
K+F +H N +H+ Y C + C + +D ++ + H+ G
Sbjct: 106 SKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 51.1 bits (123), Expect = 3e-07
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 29/118 (24%)
Query: 707 EKKYTCEICGTGFMYKSSLHHH---KFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSG 763
E + C F + L HH + H + + F C +
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------- 41
Query: 764 DIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSFKEKKSLVRHYKIHKG 819
C F + ++ H + H+ E+P+ C + C S+ ++L H + H G
Sbjct: 42 -----CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94
Score = 48.0 bits (115), Expect = 4e-06
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 13/91 (14%)
Query: 1777 KNHICEICGKSFKKKDLLREHMI---VHSTLRPFLCEFCNA-----GFKCRKHLLQHYRT 1828
+ + C + F ++ L H+ +H + F+C + FK + L+ H R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 1829 HT--KPKATNSFSSSKCEESFDNCNNLWSHM 1857
HT KP + + C +S+ NL +H+
Sbjct: 62 HTGEKP---HKCTFEGCRKSYSRLENLKTHL 89
Score = 38.7 bits (91), Expect = 0.005
Identities = 40/208 (19%), Positives = 58/208 (27%), Gaps = 70/208 (33%)
Query: 75 FQCPDCHTMMKNFAYLKKHVRDN--HSGET-FSCDEC-----SKSFTTKKCLREHYKKLH 126
+ C + L H+ H F C + F + L H + H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH-MRRH 62
Query: 127 TIRIRSSREENDMKKKTMVYVEGVVKYKCP--ECGFMVKRFQGLREHIVSVHAQVKDHVC 184
T G +KC C R + L+ H+ S H K ++C
Sbjct: 63 T---------------------GEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEKPYMC 100
Query: 185 --IVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKIFNVNKEDCQIMQGEKV 242
C AF A H R H+ EK
Sbjct: 101 EHEGCSKAFSNASDRAKHQNRTHS--------------------------------NEK- 127
Query: 243 KFKC--PECPRSYGNFSELKKHLAVHTG 268
+ C P C + Y + S L+KH+ G
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain
containing protein 22B, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 100 bits (252), Expect = 5e-25
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 1281 MRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHM 1337
+G+K + CQ CGKSF + RH ++H +G Y C VCG+ +L HM
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMH--LGLRPYGCGVCGKKFKMKHHLVGHM 57
Query: 1338 RNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLT 1390
+ HTG K Y C IC K F +H+ S +S++ + +
Sbjct: 58 KIHTGIKPYECNICAKRFMW--RDSFHRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 92.1 bits (230), Expect = 5e-22
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG 1317
G+ Y C C + +HM +H G +P+ C VCGK F + HL H IH G
Sbjct: 7 GDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH--TG 62
Query: 1318 ---YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQ 1357
Y+CN+C + + H + K Y + T+
Sbjct: 63 IKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTE 103
Score = 84.4 bits (210), Expect = 2e-19
Identities = 29/148 (19%), Positives = 50/148 (33%), Gaps = 43/148 (29%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKA 1593
+G+K Y C QCG SFT + H H
Sbjct: 3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMH----------------------------- 32
Query: 1594 LFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSL 1653
+ Y C +C K+ + +++ H + +H +KPYEC+ C + S
Sbjct: 33 ----------LGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSF 81
Query: 1654 DDHYRIHTGEKKYVCQQCGASFTQWASL 1681
H + + K Y + + T+ +
Sbjct: 82 --HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 82.1 bits (204), Expect = 1e-18
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDHLDNH 704
+GD+ Y C CGKSF K +RH + H G Y C +CG+ + H+ H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 705 KGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEK 745
G K Y C IC FM++ S H H S + ++ + E+
Sbjct: 61 TGIKPYECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQ 99
Score = 79.0 bits (196), Expect = 2e-17
Identities = 33/101 (32%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQC 684
Y C C FT H+ H G RPY C VCGK F K HL H H G Y+C
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYEC 68
Query: 685 NICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSL 725
NIC + +F H+ K Y S
Sbjct: 69 NICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107
Score = 74.8 bits (185), Expect = 5e-16
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHT 2000
SG+K Y C C K F S + HM +H +R + C VC + F ++L HM+IHT
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 2001 GEKKYVCETCGASFVHWGSLN--IH 2023
G K Y C C F+ S + +
Sbjct: 62 GIKPYECNICAKRFMWRDSFHRHVT 86
Score = 74.0 bits (183), Expect = 1e-15
Identities = 32/103 (31%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGY 378
Y C C SF + HM H G +PY C CGK F +K L H K H G K Y
Sbjct: 11 YPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTGIKPY 66
Query: 379 RCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSL 421
C+IC +F H K Y S
Sbjct: 67 ECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 73.6 bits (182), Expect = 1e-15
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
K+Y C C K T++ H +H L+PY C CG K L H +IHTG K Y
Sbjct: 9 KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY 66
Query: 1667 VCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
C C F S H+ S T++ + +
Sbjct: 67 ECNICAKRFMWRDSF--HRHVTSCTKSYEAAK 96
Score = 73.6 bits (182), Expect = 1e-15
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKDHLDSHR 401
+G+K Y C+ CGKSF K + + H HLG + Y C +CG + H+ H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 402 GEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYC 439
G K Y C C F ++ S HR ++Y
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97
Score = 72.9 bits (180), Expect = 3e-15
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKL 1994
H+ +H G + Y C +C K F L HMK +H I+ ++C +C + F ++
Sbjct: 25 RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRF--MWRDSF 81
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLN 2021
H + + K Y + +
Sbjct: 82 HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 72.5 bits (179), Expect = 3e-15
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K+Y C C K T++ H +H L+PY C CG K L H +IHTG K Y
Sbjct: 9 KLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY 66
Query: 1543 VCQQCGASFTQWASL 1557
C C F S
Sbjct: 67 ECNICAKRFMWRDSF 81
Score = 70.5 bits (174), Expect = 2e-14
Identities = 17/75 (22%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
+ Y C +C K+ + +++ H + +H +KPYEC+ C + S H + + K Y
Sbjct: 36 RPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSY 92
Query: 1543 VCQQCGASFTQWASL 1557
+ + T+ +
Sbjct: 93 EAAKAEQNTTEASGP 107
Score = 69.8 bits (172), Expect = 3e-14
Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 22/119 (18%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVN 1246
Y C C K++T + H+ +H G R C +C K F L H + H
Sbjct: 11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH-------- 60
Query: 1247 QLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHL 1305
G Y+C +C DS H + + K + ++
Sbjct: 61 ----------TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 65.5 bits (161), Expect = 9e-13
Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
G+K + C +C +S+ + S+ +H+++H G + + C VC + F MK+ L H ++H
Sbjct: 7 GDK-LYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIH--- 60
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKS 358
G++ Y+C C F ++ H+ + K Y ++
Sbjct: 61 ----------------TGIKPYECNI--CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQN 100
Query: 359 FPLKRRLNA 367
++
Sbjct: 101 TTEASGPSS 109
Score = 64.0 bits (157), Expect = 4e-12
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 24/122 (19%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
Y C C + +T S+ RH +H G R Y C +C K F +K+ L H ++H
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHT------- 61
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKH 668
G+ Y+C+IC F DS H + + Y ++
Sbjct: 62 -------------GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASG 106
Query: 669 LN 670
+
Sbjct: 107 PS 108
Score = 56.3 bits (137), Expect = 2e-09
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 30/110 (27%)
Query: 1337 MRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+G+K Y C+ CGK FT + H H R + C C F+
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKM----------- 49
Query: 1397 VLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYL 1446
+ +L+ HMKIH+ +P++C++C +F R
Sbjct: 50 ------------------KHHLVGHMKIHTGIKPYECNICAKRFMWRDSF 81
Score = 49.0 bits (118), Expect = 6e-07
Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 20/119 (16%)
Query: 1996 MRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNS 2054
+G+K Y C+ CG SF H + H H+ + + C CG +K L H++
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-I 59
Query: 2055 HTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIPKCHS------CQKCEESFDNCNNL 2107
HT K C+ C K + S K E++ +
Sbjct: 60 HTGIKPYECNICAKRFM-----------WRDSFHRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 48.6 bits (117), Expect = 7e-07
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 1757 CGNSYANPGNLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAG 1815
CG S+ + HM +H + + C +CGK FK K L HM +H+ ++P+ C C
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 1816 FKCRKHLLQHYRTHTKP 1832
F R +H + TK
Sbjct: 75 FMWRDSFHRHVTSCTKS 91
Score = 48.2 bits (116), Expect = 1e-06
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
C+ CGKSF K HM +H LRP+ C C FK + HL+ H + HT KP
Sbjct: 13 CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65
Score = 45.1 bits (108), Expect = 1e-05
Identities = 21/48 (43%), Positives = 23/48 (47%)
Query: 772 CGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
CG F + RH +H RPY C C FK K LV H KIH G
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Score = 42.4 bits (101), Expect = 1e-04
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFI 1712
+G+K Y C QCG SFT + H H R C F ++L HM I
Sbjct: 3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 59
Score = 36.7 bits (86), Expect = 0.011
Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 30/98 (30%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTS 458
G+K Y C+ CG F +KS H H+ R Y C
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCG--------------------- 41
Query: 459 GDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELC 496
CG +F + +L+ H++ H + + C +C
Sbjct: 42 --------VCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71
Score = 36.3 bits (85), Expect = 0.019
Identities = 7/45 (15%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLT 1231
Y+C+ C K + H V ++ +++ + S +
Sbjct: 66 YECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 32.4 bits (75), Expect = 0.37
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 787 KVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S ++ Y C+ C SF K RH +H G
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG 34
Score = 32.0 bits (74), Expect = 0.57
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 38/129 (29%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
Y C +CG H+ S+H ++ + C VCG F + L H ++ HT
Sbjct: 11 YPC-QCGKSFTHKSQRDRHM-SMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHT------ 61
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHF 272
G K ++C C + + +H V + K +
Sbjct: 62 --------------------------GIK-PYECNICAKRFMWRDSFHRH--VTSCTKSY 92
Query: 273 VCSVCQRGF 281
+ ++
Sbjct: 93 EAAKAEQNT 101
Score = 31.6 bits (73), Expect = 0.63
Identities = 5/28 (17%), Positives = 8/28 (28%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLEN 1965
H + S K Y + S +
Sbjct: 82 HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 30.9 bits (71), Expect = 1.5
Identities = 22/108 (20%), Positives = 32/108 (29%), Gaps = 33/108 (30%)
Query: 88 AYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVY 146
+ +H+ H G + C C K F K L H K+HT
Sbjct: 23 SQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHT------------------- 61
Query: 147 VEGVVKYKCPECGFMVKRF---QGLREHIVSVHAQVKDHVCIVCGAAF 191
G+ Y+C C KRF H+ + K +
Sbjct: 62 --GIKPYECNICA---KRFMWRDSFHRHV---TSCTKSYEAAKAEQNT 101
Score = 30.1 bits (69), Expect = 2.3
Identities = 23/122 (18%), Positives = 37/122 (30%), Gaps = 33/122 (27%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAFNN 524
CQ CG F + H+ H R + C +C K + L+ H H
Sbjct: 13 CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH----------- 60
Query: 525 SQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSK 584
G + Y+C +C + + RH V S + Y + +
Sbjct: 61 ------------------TGIK-PYECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQ 99
Query: 585 CF 586
Sbjct: 100 NT 101
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 99.3 bits (248), Expect = 5e-24
Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 13/143 (9%)
Query: 1267 CPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH---------FNNIHMKVG 1317
S + + + C ++F+ L H N H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEI--CGKGFTQWASHYYHKFTHSEERSFK 1375
+C G+ L H+R HTGEK + C CGK F + + HK TH+ E+ FK
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 1376 CSY--CAMTFRCPRTLTEHKKTH 1396
C + C F +H H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVH 145
Score = 95.0 bits (237), Expect = 2e-22
Identities = 41/165 (24%), Positives = 59/165 (35%), Gaps = 20/165 (12%)
Query: 1191 DCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKK 1250
+ + + + + CD++F + L H +
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTH-VTMEHV---------G 51
Query: 1251 KSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQV--CGKSFAAREHLKRH 1308
E +CP L H+R+HTGEKPF C CGK FA E+LK H
Sbjct: 52 GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111
Query: 1309 FNNIHMKVG---YQCNV--CGRVLTDSSNLKVHMRNHTGEKKYVC 1348
H G ++C C R +SS+ K HM HT +K
Sbjct: 112 -KRTH--TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 83.1 bits (206), Expect = 2e-18
Identities = 30/178 (16%), Positives = 50/178 (28%), Gaps = 38/178 (21%)
Query: 631 CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSHAGFG 681
S C ++F L H +H +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEI--CGTGFMYKSSLHHHKFSHSKERMFQ 739
+C G+ +H+ H GEK + C CG F +L HK +H+ E+ F+
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 740 CSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
C F C F + +H VH++++
Sbjct: 123 CEFEG---------------------------CDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 81.2 bits (201), Expect = 1e-17
Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 17/151 (11%)
Query: 1930 QTFRGLKAHLD---IHSGEKDYACHICNKVFVRHSTLENHMKAVH--------EKIRDFQ 1978
+ + +K L I + C++ F L H+ H +
Sbjct: 5 SSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE 64
Query: 1979 CKVCDRAFFDVYNLKLHMRIHTGEKKYVC--ETCGASFVHWGSLNIHNYSHINAQ-FVCS 2035
C ++F Y L H+R+HTGEK + C CG F +L IH +H + F C
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 2036 F--CGNTYKNPKSLDSHIRNSHTNRKKSICD 2064
F C + N H+ HT+ K
Sbjct: 125 FEGCDRRFANSSDRKKHMH-VHTSDKSGPSS 154
Score = 81.2 bits (201), Expect = 1e-17
Identities = 36/136 (26%), Positives = 45/136 (33%), Gaps = 27/136 (19%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYT---------CDVCGKSFVAKKHLNRH---- 672
CD F+ L HV P C GKSF AK L H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 673 -----YNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEI--CGTGFMYKSSL 725
+ C G CG++ + S N K H H GEK + CE C F S
Sbjct: 86 TGEKPFPCPFPG-------CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDR 138
Query: 726 HHHKFSHSKERMFQCS 741
H H+ ++ S
Sbjct: 139 KKHMHVHTSDKSGPSS 154
Score = 80.4 bits (199), Expect = 2e-17
Identities = 35/175 (20%), Positives = 52/175 (29%), Gaps = 35/175 (20%)
Query: 1519 CGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSC 1578
G K I + + C +F+ L H HV
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-------HV----- 50
Query: 1579 HQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1638
E + EC K + +++H R VH KP+
Sbjct: 51 ------------------GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPF 91
Query: 1639 ECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQ--QCGASFTQWASLFYHKFSHS 1689
C CG + ++L H R HTGEK + C+ C F + H H+
Sbjct: 92 PCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146
Score = 80.4 bits (199), Expect = 2e-17
Identities = 43/194 (22%), Positives = 60/194 (30%), Gaps = 45/194 (23%)
Query: 248 ECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLR 307
S + + + C R F + L H + H+
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTH-VTMEHVG--------- 51
Query: 308 RETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC--EACGKSFPLKRRL 365
E N +CP SF+ L H+ HTGEKP+ C CGK F
Sbjct: 52 -GPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF------ 102
Query: 366 NAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCET--CGTGFAYKSSLYH 423
+ + N K H +H GEK + CE C FA S
Sbjct: 103 ----------------------ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK 140
Query: 424 HRFTHIKDRTYPCT 437
H H D++ P +
Sbjct: 141 HMHVHTSDKSGPSS 154
Score = 79.6 bits (197), Expect = 3e-17
Identities = 40/184 (21%), Positives = 60/184 (32%), Gaps = 60/184 (32%)
Query: 236 IMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFV---------CSVCQRGFFMKNR 286
I + + C R++ EL H+ + C + F K +
Sbjct: 19 IDEAQL-SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK 77
Query: 287 LNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTG 346
L H RVH T G + + CP PGC F R L+ H +HTG
Sbjct: 78 LVNH-IRVH----------------T---GEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117
Query: 347 EKPYTC--EACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEK 404
EKP+ C E C + F +N+++ K H+ H +K
Sbjct: 118 EKPFKCEFEGCDRRF----------------------------ANSSDRKKHMHVHTSDK 149
Query: 405 KYTC 408
Sbjct: 150 SGPS 153
Score = 78.5 bits (194), Expect = 1e-16
Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 13/145 (8%)
Query: 327 CPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH---------YNKWHLGKG 377
SS Q + ++C ++F L H H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 378 YRCHICGSTMSNAANFKDHLDSHRGEKKYTC--ETCGTGFAYKSSLYHHRFTHIKDRTYP 435
C G + +H+ H GEK + C CG FA +L H+ TH ++ +
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 436 CTY--CERKYQSPKTLKEHLKVHTS 458
C + C+R++ + K+H+ VHTS
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTS 147
Score = 72.3 bits (178), Expect = 1e-14
Identities = 27/224 (12%), Positives = 54/224 (24%), Gaps = 75/224 (33%)
Query: 1323 CGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMT 1382
G + + C + F+ H + ++
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 1383 FRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKL 1442
CPR G + + L++H+++H+ +P C
Sbjct: 63 EECPR--------------------EGKSFKAKYKLVNHIRVHTGEKPFPCPFPG----- 97
Query: 1443 RKYLKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMID 1502
C K +N+
Sbjct: 98 -----------------------------------------------CGKIFARSENLKI 110
Query: 1503 HQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEKKYVC 1544
H+R+ H KP++C+ C ++ H +HT +K
Sbjct: 111 HKRT-HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 71.2 bits (175), Expect = 4e-14
Identities = 35/163 (21%), Positives = 51/163 (31%), Gaps = 24/163 (14%)
Query: 1408 CGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKF 1467
G+ K LS I C+ F L H +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVT------HVTM--------- 47
Query: 1468 KALFT-ERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLS 1524
E + EC K + +++H R VH KP+ C CG +
Sbjct: 48 ---EHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFA 103
Query: 1525 SKKSLDDHYRIHTGEKKYVCQ--QCGASFTQWASLFYHKFSHS 1565
++L H R HTGEK + C+ C F + H H+
Sbjct: 104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146
Score = 68.9 bits (169), Expect = 2e-13
Identities = 42/196 (21%), Positives = 61/196 (31%), Gaps = 49/196 (25%)
Query: 163 KRFQGLREHIVS--VHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDK 220
Q +++ + + C F L TH + V Q NH +
Sbjct: 5 SSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTH-VTMEHVGGPEQNNHVCYWE 63
Query: 221 LDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSV--CQ 278
+CP +S+ +L H+ VHTGEK F C C
Sbjct: 64 ------------------------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCG 99
Query: 279 RGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQ 338
+ F L H KR H T G + +KC GC F + +
Sbjct: 100 KIFARSENLKIH-KRTH----------------T---GEKPFKCEFEGCDRRFANSSDRK 139
Query: 339 EHMLSHTGEKPYTCEA 354
+HM HT +K
Sbjct: 140 KHMHVHTSDKSGPSSG 155
Score = 68.5 bits (168), Expect = 3e-13
Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 22/170 (12%)
Query: 1842 KCEESFDNCNNLWSHMFIKHENSDFVCNLCPPDSKIVIKYAHLLVRHMKKHHTMQLSISS 1901
S S +I C + L V H+ H
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSC---DRTFSTMHEL-VTHVTMEH-------- 49
Query: 1902 VSKHIKSKTQIFVDGAIRFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHI--CNKVFVR 1959
V ++ + + CP + L H+ +H+GEK + C C K+F R
Sbjct: 50 VGGPEQNNHVCYWEE-----CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104
Query: 1960 HSTLENHMKAVHEKIRDFQCKV--CDRAFFDVYNLKLHMRIHTGEKKYVC 2007
L+ H + H + F+C+ CDR F + + K HM +HT +K
Sbjct: 105 SENLKIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 67.7 bits (166), Expect = 5e-13
Identities = 29/192 (15%), Positives = 50/192 (26%), Gaps = 54/192 (28%)
Query: 1490 CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYV------ 1543
K + + + E +C S+ L H +
Sbjct: 3 SGSSGQPIKQELSCKW-IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1544 ---CQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSE 1600
C + G SF L H H
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVH------------------------------------ 85
Query: 1601 SSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDDH 1656
+ +K + C C K +N+ H+R+ H KP++C+ C ++ H
Sbjct: 86 ---TGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGEKPFKCEFEGCDRRFANSSDRKKH 141
Query: 1657 YRIHTGEKKYVC 1668
+HT +K
Sbjct: 142 MHVHTSDKSGPS 153
Score = 65.0 bits (159), Expect = 4e-12
Identities = 36/200 (18%), Positives = 51/200 (25%), Gaps = 62/200 (31%)
Query: 1643 CGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEESFDN 1702
G K I + + C +F+ L H
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME-------------- 48
Query: 1703 CNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCV---CSYCGN 1759
H+ C C G
Sbjct: 49 --------------------------------------HVGGPEQNNHVCYWEECPREGK 70
Query: 1760 SYANPGNLRTHMVVHSN-KNHICEI--CGKSFKKKDLLREHMIVHSTLRPFLCEF--CNA 1814
S+ L H+ VH+ K C CGK F + + L+ H H+ +PF CEF C+
Sbjct: 71 SFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDR 130
Query: 1815 GFKCRKHLLQHYRTHT--KP 1832
F +H HT K
Sbjct: 131 RFANSSDRKKHMHVHTSDKS 150
Score = 63.5 bits (155), Expect = 2e-11
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 1738 LERHMKKH--HTMQQRCVCSYCGNSYANPGNLRTHMVVH----------SNKNHICEICG 1785
+++ + Q C +++ L TH+ + C G
Sbjct: 10 IKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREG 69
Query: 1786 KSFKKKDLLREHMIVHSTLRPFLCEF--CNAGFKCRKHLLQHYRTHT--KPKATNSF--S 1839
KSFK K L H+ VH+ +PF C F C F ++L H RTHT KP F
Sbjct: 70 KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP-----FKCE 124
Query: 1840 SSKCEESFDNCNNLWSHM 1857
C+ F N ++ HM
Sbjct: 125 FEGCDRRFANSSDRKKHM 142
Score = 60.8 bits (148), Expect = 1e-10
Identities = 21/135 (15%), Positives = 36/135 (26%), Gaps = 22/135 (16%)
Query: 687 CGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKK 746
G + + + C F L H Q +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 747 YMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSF 804
C G F + ++ H +VH+ E+P+ C + C F
Sbjct: 63 E--------------------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102
Query: 805 KEKKSLVRHYKIHKG 819
++L H + H G
Sbjct: 103 ARSENLKIHKRTHTG 117
Score = 60.8 bits (148), Expect = 1e-10
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 23/122 (18%)
Query: 1175 EKYKLVEGDQVRYKCSDCDKTYTRFYELKCHLMVHRGERTMSCTM--CDKSFYQVSRLTE 1232
+ +C K++ Y+L H+ VH GE+ C C K F + L
Sbjct: 51 GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI 110
Query: 1233 HYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPL--CPSITSRYDSLQQHMRLHTGEKPF 1290
H KR+H T GE +KC C + ++HM +HT +K
Sbjct: 111 H-KRTH----T--------------GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG 151
Query: 1291 SC 1292
Sbjct: 152 PS 153
Score = 60.4 bits (147), Expect = 2e-10
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 15/119 (12%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVH--------ELLKPYECDTCGHGLSSKKSLDDHYR 1658
C + + ++ H H + EC G +K L +H R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 1659 IHTGEKKYVC--QQCGASFTQWASLFYHKFSHS-----ETRNQKCEESFDNCNNLWSHM 1710
+HTGEK + C CG F + +L HK +H+ + + C+ F N ++ HM
Sbjct: 84 VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHM 142
Score = 56.1 bits (136), Expect = 6e-09
Identities = 31/171 (18%), Positives = 51/171 (29%), Gaps = 52/171 (30%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVH--------ELLKPYECDTCGHGLSSKKSLDDHYR 1534
C + + ++ H H + EC G +K L +H R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 1535 IHTGEKKYVC--QQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFK 1592
+HTGEK + C CG F + +L HK +H+
Sbjct: 84 VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT--------------------------- 116
Query: 1593 ALFTERSESSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECD 1641
+K ++C+ C ++ N + H VH K
Sbjct: 117 ------------GEKPFKCEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS 154
Score = 56.1 bits (136), Expect = 6e-09
Identities = 36/194 (18%), Positives = 56/194 (28%), Gaps = 46/194 (23%)
Query: 468 CGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAFNNSQS 527
GS K L+ + + C+ T L+ H T +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME---------HVGGP 53
Query: 528 SSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSI--CSKC 585
++H E CP + + + + H VH+GE+ + C C K
Sbjct: 54 EQNNHVCYWEE------------CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI 101
Query: 586 FFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHI--CDSIFTRYDSLRL 643
F L H +R H G +KC CD F +
Sbjct: 102 FARSENLKIH-KRTHT--------------------GEKPFKCEFEGCDRRFANSSDRKK 140
Query: 644 HVRTHTGDRPYTCD 657
H+ HT D+
Sbjct: 141 HMHVHTSDKSGPSS 154
Score = 53.1 bits (128), Expect = 7e-08
Identities = 33/202 (16%), Positives = 55/202 (27%), Gaps = 54/202 (26%)
Query: 383 CGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERK 442
GS+ + ++C F+ L H +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 443 YQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC--ELCNANL 500
+ C G F + L+ HIR H ++ C C
Sbjct: 63 EE--------------------CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102
Query: 501 KTRRSLLRHYTTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYKCPL--CDRIY 558
+L H TH T G++ +KC CDR +
Sbjct: 103 ARSENLKIHKRTH-T----------------------------GEK-PFKCEFEGCDRRF 132
Query: 559 TSFSETKRHFEVHSGERKYTCS 580
+ S+ K+H VH+ ++ S
Sbjct: 133 ANSSDRKKHMHVHTSDKSGPSS 154
Score = 52.7 bits (127), Expect = 1e-07
Identities = 18/111 (16%), Positives = 27/111 (24%), Gaps = 15/111 (13%)
Query: 1614 CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYV------ 1667
K + + + E +C S+ L H +
Sbjct: 3 SGSSGQPIKQELSCKW-IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1668 ---CQQCGASFTQWASLFYHKFSHS-----ETRNQKCEESFDNCNNLWSHM 1710
C + G SF L H H+ C + F NL H
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHK 112
Score = 51.9 bits (125), Expect = 2e-07
Identities = 43/183 (23%), Positives = 55/183 (30%), Gaps = 53/183 (28%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCP 156
+ C ++F+T L H + + +CP
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTH-VTMEHV------------GGPEQNNHVCYWEECP 66
Query: 157 ECGFMVKRFQGLREHIVSVHAQVKDHVCIV--CGAAFGLARRLKTHYIRRHTVNILTQAN 214
G K L HI VH K C CG F + LK H R HT
Sbjct: 67 REGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHT-------- 116
Query: 215 HDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHF 272
GEK FKC C R + N S+ KKH+ VHT +K
Sbjct: 117 ------------------------GEK-PFKCEFEGCDRRFANSSDRKKHMHVHTSDKSG 151
Query: 273 VCS 275
S
Sbjct: 152 PSS 154
Score = 41.5 bits (98), Expect = 7e-04
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 9/82 (10%)
Query: 1785 GKSFKKKDLLREHMI---VHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFS 1839
G S +++ + + + C+ F L+ H P+ N
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 1840 S----SKCEESFDNCNNLWSHM 1857
+ +SF L +H+
Sbjct: 61 YWEECPREGKSFKAKYKLVNHI 82
Score = 30.7 bits (70), Expect = 3.1
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 889 KTHSCIYCEESFSDSKFLDAHVNIEHG-KRVHGDDEFECYQCNQCG 933
+ C+ +FS L HV +EH + +C + G
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREG 69
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 96.7 bits (242), Expect = 8e-24
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMRNH 1340
P C+VCGK F+ ++ LK H H G Y+C C DSS+L H+R H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTH-MRCH--TGVKPYKCKTCDYAAADSSSLNKHLRIH 59
Query: 1341 TGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+ E+ + C+IC + H +H+ +
Sbjct: 60 SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 91.3 bits (228), Expect = 5e-22
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG 1317
+KC +C SR D L+ HMR HTG KP+ C+ C + A L +H IH
Sbjct: 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIH--SD 61
Query: 1318 ---YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVC 1348
++C +C +SS L VH+R+HTG+
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 80.9 bits (201), Expect = 2e-18
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 647 THTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDHLDNHK 705
+ P+ C+VCGK F K L H C H G Y+C C +DS++ HL H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRC-HTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 706 GEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
E+ + C+IC S L H SH+ +
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 78.6 bits (195), Expect = 1e-17
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNLKLHMRIH 1999
+ C +C K F R L+ HM+ H K ++CK CD A D +L H+RIH
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVK--PYKCKTCDYAAADSSSLNKHLRIH 59
Query: 2000 TGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+ E+ + C+ C + + L +H SH
Sbjct: 60 SDERPFKCQICPYASRNSSQLTVHLRSH 87
Score = 77.5 bits (192), Expect = 4e-17
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKDHLDSHR 401
S P+ CE CGK F K +L H + H G K Y+C C +++++ HL H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 402 GEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
E+ + C+ C S L H +H D
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 77.1 bits (191), Expect = 6e-17
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
++C++C K + + + H R H +KPY+C TC + + SL+ H RIH+ E+ +
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 1543 VCQQCGASFTQWASLFYHKFSH 1564
CQ C + + L H SH
Sbjct: 66 KCQICPYASRNSSQLTVHLRSH 87
Score = 77.1 bits (191), Expect = 6e-17
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
++C++C K + + + H R H +KPY+C TC + + SL+ H RIH+ E+ +
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 1667 VCQQCGASFTQWASLFYHKFSH 1688
CQ C + + L H SH
Sbjct: 66 KCQICPYASRNSSQLTVHLRSH 87
Score = 72.8 bits (180), Expect = 2e-15
Identities = 28/102 (27%), Positives = 38/102 (37%), Gaps = 21/102 (20%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHI 630
+ C +C KCF K++L H R H GV YKC
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTH-MRCHT--------------------GVKPYKCKT 41
Query: 631 CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
CD SL H+R H+ +RP+ C +C + L H
Sbjct: 42 CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83
Score = 72.1 bits (178), Expect = 4e-15
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 1920 FKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQC 1979
KC C LK H+ H+G K Y C C+ S+L H++ +H R F+C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKC 67
Query: 1980 KVCDRAFFDVYNLKLHMRIHTGEKKYVC 2007
++C A + L +H+R HTG+
Sbjct: 68 QICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 70.9 bits (175), Expect = 9e-15
Identities = 23/133 (17%), Positives = 39/133 (29%), Gaps = 40/133 (30%)
Query: 1536 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALF 1595
+ C+ CG F++ L H H+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHT------------------------------ 32
Query: 1596 TERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDD 1655
K Y+C C + ++ H R +H +P++C C + + L
Sbjct: 33 ---------GVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTV 82
Query: 1656 HYRIHTGEKKYVC 1668
H R HTG+
Sbjct: 83 HLRSHTGDSGPSS 95
Score = 69.8 bits (172), Expect = 2e-14
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLS 1399
+ CE+CGK F++ H H+ + +KC C +L +H + H S
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH--S 60
Query: 1400 DVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
D + C C L H++ H+
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 69.8 bits (172), Expect = 2e-14
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGY 378
+KC C F R + L+ HM HTG KPY C+ C + LN H + H + +
Sbjct: 9 HKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPF 65
Query: 379 RCHICGSTMSNAANFKDHLDSHRGEKKYTC 408
+C IC N++ HL SH G+ +
Sbjct: 66 KCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 68.2 bits (168), Expect = 8e-14
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQK 1695
P++C+ CG S K L H R HTG K Y C+ C + +SL H HS+ R K
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 1696 CEE---SFDNCNNLWSHM 1710
C+ + N + L H+
Sbjct: 67 CQICPYASRNSSQLTVHL 84
Score = 68.2 bits (168), Expect = 8e-14
Identities = 28/129 (21%), Positives = 40/129 (31%), Gaps = 40/129 (31%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQK 1571
P++C+ CG S K L H R HTG K Y C+ C + +SL H HS+
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD----- 61
Query: 1572 HVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSV 1631
++ ++C IC N + H R
Sbjct: 62 ----------------------------------ERPFKCQICPYASRNSSQLTVHLR-S 86
Query: 1632 HELLKPYEC 1640
H
Sbjct: 87 HTGDSGPSS 95
Score = 63.6 bits (156), Expect = 3e-12
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 23/114 (20%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
KC C + + +LK H+ HTG K + C C + LN+H R+H
Sbjct: 5 SSG-PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIH--- 59
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
R +KC CP + + + L H+ SHTG+ +
Sbjct: 60 ----------------SDERPFKCQI--CPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 63.2 bits (155), Expect = 4e-12
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 21/108 (19%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
+KC +C + ++ + K H H+G + Y C C + L++H R+H
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHS------- 60
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC IC L +H+R+HTGD +
Sbjct: 61 -------------DERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 62.1 bits (152), Expect = 1e-11
Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 24/116 (20%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHP 325
C VC + F K++L H R H GV+ YKC
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTH-MRCH-------------------TGVKPYKCKT- 41
Query: 326 GCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
C + ++L +H+ H+ E+P+ C+ C + +L H + H G G
Sbjct: 42 -CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL-RSHTGDSGPSS 95
Score = 60.1 bits (147), Expect = 5e-11
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFC 1812
C CG ++ L+THM H+ K + C+ C + L +H+ +HS RPF C+ C
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 1813 NAGFKCRKHLLQHYRTHT--KP 1832
+ L H R+HT
Sbjct: 71 PYASRNSSQLTVHLRSHTGDSG 92
Score = 60.1 bits (147), Expect = 5e-11
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 29/116 (25%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSG 763
+ CE+CG F K L H H+ + ++C
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC----------------------- 39
Query: 764 DIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
TC ++ +H ++HS ERP+ C+ C + + L H + H G
Sbjct: 40 ------KTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTG 89
Score = 59.7 bits (146), Expect = 6e-11
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCS 2035
+C+VC + F LK HMR HTG K Y C+TC + SLN H H + + F C
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 2036 FCGNTYKNPKSLDSHIRNSHT 2056
C +N L H+R SHT
Sbjct: 69 ICPYASRNSSQLTVHLR-SHT 88
Score = 58.2 bits (142), Expect = 2e-10
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K Y+C C + ++ H R +H +P++C C + + L H R HTG+
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP 93
Query: 1543 VC 1544
Sbjct: 94 SS 95
Score = 50.5 bits (122), Expect = 1e-07
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIH 1425
+ KC C F L H + H + VK + C TC +L H++IH
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCH--TGVKPYKCKTCDYAAADSSSLNKHLRIH 59
Query: 1426 STGRPHQCDVCNAKFKLRKYL 1446
S RP +C +C + L
Sbjct: 60 SDERPFKCQICPYASRNSSQL 80
Score = 49.7 bits (120), Expect = 2e-07
Identities = 21/106 (19%), Positives = 26/106 (24%), Gaps = 47/106 (44%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVN 1246
YKC CD L HL +H ER C +C + S
Sbjct: 37 YKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSS------------------ 78
Query: 1247 QLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
L H+R HTG+ S
Sbjct: 79 -----------------------------QLTVHLRSHTGDSGPSS 95
Score = 44.3 bits (106), Expect = 2e-05
Identities = 31/122 (25%), Positives = 42/122 (34%), Gaps = 35/122 (28%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
+KC CG R L+ H+ H VK + C C A + L H +R H+
Sbjct: 9 HKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHS------ 60
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHF 272
E+ FKC CP + N S+L HL HTG+
Sbjct: 61 --------------------------DER-PFKCQICPYASRNSSQLTVHLRSHTGDSGP 93
Query: 273 VC 274
Sbjct: 94 SS 95
Score = 41.3 bits (98), Expect = 2e-04
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 1999 HTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNSHTN 2057
+ CE CG F L H H + + C C + SL+ H+R H++
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR-IHSD 61
Query: 2058 RKKSICDDCTKAMS 2071
+ C C A
Sbjct: 62 ERPFKCQICPYASR 75
Score = 41.3 bits (98), Expect = 2e-04
Identities = 23/151 (15%), Positives = 40/151 (26%), Gaps = 59/151 (39%)
Query: 1660 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEESFDNCNNLWSHMFIKHEDSDF 1719
+ C+ CG FS + L +HM
Sbjct: 3 SGSSGPHKCEVCGKC-----------FSRK--------------DKLKTHMRC------- 30
Query: 1720 VCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KN 1778
HT + C C + A+ +L H+ +HS+ +
Sbjct: 31 --------------------------HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 1779 HICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
C+IC + + L H+ H+
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 37.4 bits (88), Expect = 0.005
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 25/110 (22%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCP 156
C+ C K F+ K L+ H + HT GV YKC
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTH-MRCHT---------------------GVKPYKCK 40
Query: 157 ECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
C + L +H+ +H+ + C +C A + +L H R HT
Sbjct: 41 TCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVHL-RSHT 88
Score = 32.0 bits (74), Expect = 0.42
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEESFDNCNNLWSHMF 1858
+ P CE C F + L H R HT KP + C+ + + ++L H+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKP-----YKCKTCDYAAADSSSLNKHLR 57
Query: 1859 I 1859
I
Sbjct: 58 I 58
Score = 31.6 bits (73), Expect = 0.58
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
G ++C C + + L KH+R HS E F C C + L H + HT
Sbjct: 33 GVKPYKCKTCDYAAADSSSLNKHLR-IHSDERPFKCQICPYASRNSSQLTVH-LRSHT 88
Score = 30.9 bits (71), Expect = 1.1
Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 30/115 (26%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAFNN 524
C+ CG F + L TH+R H + + C+ C+ SL +H H
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH----------- 59
Query: 525 SQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTC 579
+R +KC +C + S+ H H+G+ +
Sbjct: 60 ------------------SDER-PFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 96.8 bits (242), Expect = 1e-23
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 1285 TGEKPFSC--QVCGKSFAAREHLKRHFNNIHMKVG---YQCNV--CGRVLTDSSNLKVHM 1337
+ ++PF C C K + HL+ H + H G YQC+ C R + S LK H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMH-SRKH--TGEKPYQCDFKDCERRFSRSDQLKRHQ 58
Query: 1338 RNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSY--CAMTFRCPRTLTEHKKT 1395
R HTG K + C+ C + F++ H TH+ E+ F C + C F L H
Sbjct: 59 RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118
Query: 1396 H 1396
H
Sbjct: 119 H 119
Score = 87.6 bits (218), Expect = 2e-20
Identities = 45/164 (27%), Positives = 60/164 (36%), Gaps = 53/164 (32%)
Query: 1211 GERTMSCT--MCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPL-- 1266
+R C C+K ++++S L H R H GE Y+C
Sbjct: 3 EKRPFMCAYPGCNKRYFKLSHLQMH-SRKHT------------------GEKPYQCDFKD 43
Query: 1267 CPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRV 1326
C SR D L++H R HTG KPF C+ C + F
Sbjct: 44 CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF--------------------------- 76
Query: 1327 LTDSSNLKVHMRNHTGEKKYVCEI--CGKGFTQWASHYYHKFTH 1368
+ S +LK H R HTGEK + C C K F + H H
Sbjct: 77 -SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 81.8 bits (203), Expect = 2e-18
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1935 LKAHLDIHSGEKDYACHI--CNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNL 1992
L+ H H+GEK Y C C + F R L+ H + H ++ FQCK C R F +L
Sbjct: 24 LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHL 82
Query: 1993 KLHMRIHTGEKKYVCET--CGASFVHWGSLNIH 2023
K H R HTGEK + C C F L H
Sbjct: 83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 80.3 bits (199), Expect = 8e-18
Identities = 37/114 (32%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 626 YKC--HICDSIFTRYDSLRLHVRTHTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFG 681
+ C C+ + + L++H R HTG++PY CD C + F L RH H G
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVK 65
Query: 682 -YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEI--CGTGFMYKSSLHHHKFSH 732
+QC C R S S + K H H GEK ++C C F L H H
Sbjct: 66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 75.6 bits (187), Expect = 3e-16
Identities = 37/141 (26%), Positives = 56/141 (39%), Gaps = 32/141 (22%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA--CGKSFPLKRRLNAHYNKWHLGKG 377
+ C +PGC + + + LQ H HTGEKPY C+ C + F
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRF------------------ 48
Query: 378 YRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S + K H H G K + C+TC F+ L H TH ++ + C
Sbjct: 49 ----------SRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR 98
Query: 438 Y--CERKYQSPKTLKEHLKVH 456
+ C++K+ L H +H
Sbjct: 99 WPSCQKKFARSDELVRHHNMH 119
Score = 73.3 bits (181), Expect = 2e-15
Identities = 39/166 (23%), Positives = 59/166 (35%), Gaps = 52/166 (31%)
Query: 267 TGEKHFVCS--VCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPH 324
+ ++ F+C+ C + +F + L H R H T G + Y+C
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMH-SRKH----------------T---GEKPYQCDF 41
Query: 325 PGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICG 384
C F R + L+ H HTG KP+ C+ C + F
Sbjct: 42 KDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKF------------------------- 76
Query: 385 STMSNAANFKDHLDSHRGEKKYTCET--CGTGFAYKSSLYHHRFTH 428
S + + K H +H GEK ++C C FA L H H
Sbjct: 77 ---SRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 71.4 bits (176), Expect = 1e-14
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 27/130 (20%)
Query: 549 YKC--PLCDRIYTSFSETKRHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMRV 604
+ C P C++ Y S + H H+GE+ Y C C + F ++L H +R H
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHT--- 62
Query: 605 SMARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDV--CGKS 662
GV ++C C F+R D L+ H RTHTG++P++C C K
Sbjct: 63 -----------------GVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK 105
Query: 663 FVAKKHLNRH 672
F L RH
Sbjct: 106 FARSDELVRH 115
Score = 69.5 bits (171), Expect = 5e-14
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 1943 SGEKDYAC--HICNKVFVRHSTLENHMKAVH--EKIRDFQCKV--CDRAFFDVYNLKLHM 1996
S ++ + C CNK + + S L+ H + H EK +QC C+R F LK H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEK--PYQCDFKDCERRFSRSDQLKRHQ 58
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIH 2023
R HTG K + C+TC F L H
Sbjct: 59 RRHTGVKPFQCKTCQRKFSRSDHLKTH 85
Score = 68.3 bits (168), Expect = 1e-13
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 706 GEKKYTCE--ICGTGFMYKSSLHHHKFSHSKERMFQCSF--CEKKYMSPKTLKEHEQTHR 761
++ + C C + S L H H+ E+ +QC F CE+++ LK H++ H
Sbjct: 3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH- 61
Query: 762 SGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSFKEKKSLVRHYKIH 817
+G C TC +F+ ++ HT+ H+ E+P+ C + C F LVRH+ +H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 67.2 bits (165), Expect = 3e-13
Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 46/158 (29%)
Query: 1537 TGEKKYVCQQ--CGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKAL 1594
+ ++ ++C C + + + L H H+
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT----------------------------- 32
Query: 1595 FTERSESSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKS 1652
+K Y+CD C+++ + + HQR H +KP++C TC S
Sbjct: 33 ----------GEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDH 81
Query: 1653 LDDHYRIHTGEKKYVCQ--QCGASFTQWASLFYHKFSH 1688
L H R HTGEK + C+ C F + L H H
Sbjct: 82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 66.8 bits (164), Expect = 4e-13
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 1607 KIYECD--ICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTG 1662
+ + C C K+ ++ H R H KPY+CD C S L H R HTG
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 1663 EKKYVCQQCGASFTQWASLFYHKFSHS-----ETRNQKCEESFDNCNNLWSHM 1710
K + C+ C F++ L H +H+ R C++ F + L H
Sbjct: 64 VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH 116
Score = 64.1 bits (157), Expect = 4e-12
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 1483 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
K Y+CD C+++ + + HQR H +KP++C TC S L H R HTGEK
Sbjct: 35 KPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93
Query: 1541 KYVCQ--QCGASFTQWASLFYHKFSH 1564
+ C+ C F + L H H
Sbjct: 94 PFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 63.3 bits (155), Expect = 7e-12
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 1751 RCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEI--CGKSFKKKDLLREHMIVHSTLRPF 1807
C C Y +L+ H H+ K + C+ C + F + D L+ H H+ ++PF
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 1808 LCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEESFDNCNNLWSHM 1857
C+ C F HL H RTHT KP + C++ F + L H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR---WPSCQKKFARSDELVRHH 116
Score = 62.5 bits (153), Expect = 1e-11
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 1483 KIYECD--ICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTG 1538
+ + C C K+ ++ H R H KPY+CD C S L H R HTG
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 1539 EKKYVCQQCGASFTQWASLFYHKFSH 1564
K + C+ C F++ L H +H
Sbjct: 64 VKPFQCKTCQRKFSRSDHLKTHTRTH 89
Score = 59.8 bits (146), Expect = 1e-10
Identities = 32/126 (25%), Positives = 44/126 (34%), Gaps = 51/126 (40%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTR 1244
Y+C DC++ ++R +LK H H G + C C + F +
Sbjct: 37 YQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD---------------- 80
Query: 1245 VNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQV--CGKSFAAR 1302
L+ H R HTGEKPFSC+ C K FA
Sbjct: 81 -------------------------------HLKTHTRTHTGEKPFSCRWPSCQKKFARS 109
Query: 1303 EHLKRH 1308
+ L RH
Sbjct: 110 DELVRH 115
Score = 57.5 bits (140), Expect = 8e-10
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 1738 LERHMKKHHTMQQ--RCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLL 1794
L+ H +KH T ++ +C C ++ L+ H H+ K C+ C + F + D L
Sbjct: 24 LQMHSRKH-TGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL 82
Query: 1795 REHMIVHSTLRPFLCEF--CNAGFKCRKHLLQHYRTH 1829
+ H H+ +PF C + C F L++H+ H
Sbjct: 83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 54.1 bits (131), Expect = 1e-08
Identities = 34/134 (25%), Positives = 45/134 (33%), Gaps = 55/134 (41%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHH 296
GEK ++C +C R + +LK+H HTG K F C CQR
Sbjct: 33 GEK-PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQR----------------- 74
Query: 297 MNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA-- 354
F R + L+ H +HTGEKP++C
Sbjct: 75 ---------------------------------KFSRSDHLKTHTRTHTGEKPFSCRWPS 101
Query: 355 CGKSFPLKRRLNAH 368
C K F L H
Sbjct: 102 CQKKFARSDELVRH 115
Score = 52.1 bits (126), Expect = 5e-08
Identities = 37/173 (21%), Positives = 51/173 (29%), Gaps = 65/173 (37%)
Query: 1636 KPYECD--TCGHGLSSKKSLDDHYRIHTGEKKYVC--QQCGASFTQWASLFYHKFSHSET 1691
+P+ C C L H R HTGEK Y C + C FS S
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERR-----------FSRS-- 51
Query: 1692 RNQKCEESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQR 1751
L+RH ++H T +
Sbjct: 52 ----------------DQ----------------------------LKRHQRRH-TGVKP 66
Query: 1752 CVCSYCGNSYANPGNLRTHMVVHSN-KNHICEI--CGKSFKKKDLLREHMIVH 1801
C C ++ +L+TH H+ K C C K F + D L H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 44.8 bits (107), Expect = 2e-05
Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 29/109 (26%)
Query: 1341 TGEKKYVCE--ICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVL 1398
+ ++ ++C C K + + + H H+ E+ ++C +
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDF-------------------- 41
Query: 1399 SDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLK 1447
C ++ L H + H+ +P QC C KF +LK
Sbjct: 42 -------KDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83
Score = 37.1 bits (87), Expect = 0.010
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 770 DTCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSFKEKKSLVRHYKIHKG 819
C + ++ H++ H+ E+PY C++ C F L RH + H G
Sbjct: 12 PGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Score = 36.3 bits (85), Expect = 0.017
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVH 600
++C C R ++ K H H+GE+ ++C C K F + L H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH-HNMH 119
Score = 31.3 bits (72), Expect = 1.0
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 89 YLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
LK+H R H+G F C C + F+ L+ H + HT
Sbjct: 53 QLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTH-TRTHT 90
Score = 29.4 bits (67), Expect = 4.4
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Query: 71 GEIKFQCPDCHTMMKNFA---YLKKHVRDNHSGET-FSC--DECSKSFTTKKCLREH 121
G FQC C + F+ +LK H R H+GE FSC C K F L H
Sbjct: 63 GVKPFQCKTCQ---RKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 29.4 bits (67), Expect = 4.7
Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 30/122 (24%)
Query: 89 YLKKHVRDNHSGET-FSCD--ECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMV 145
+L+ H R H+GE + CD +C + F+ L+ H ++ HT
Sbjct: 23 HLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHT------------------ 62
Query: 146 YVEGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVC--IVCGAAFGLARRLKTHYIR 203
GV ++C C R L+ H H K C C F + L H
Sbjct: 63 ---GVKPFQCKTCQRKFSRSDHLKTHT-RTHTGEKPFSCRWPSCQKKFARSDELVRH-HN 117
Query: 204 RH 205
H
Sbjct: 118 MH 119
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 95.7 bits (239), Expect = 1e-23
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH-----MKVGYQCNVCGRVLTDS 1330
S R HTGEKP++C C K+F ++ L HF + + + C+ CG+ T
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 1331 SNLKVHMRNHTGEKKYVCEICGKGF 1355
+ + H N G E G
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 74.9 bits (185), Expect = 2e-16
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-----YQCNICGRVMSDS 694
S RTHTG++PY C C K+F K+ L+ H+ + + C+ CG+ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 695 TNFKDHLDNHKGEKKYTCEICGTGF 719
H DN G E G
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSS 85
Score = 74.9 bits (185), Expect = 3e-16
Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH----EKIRDFQCKVCDRAFFDVY 1990
+ H+GEK YAC C+K F + L+ H K + F C C + F
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 1991 NLKLHMRIHTGEKKYVCETCGASF 2014
+ H G E G S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 69.9 bits (172), Expect = 1e-14
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-----KGYRCHICGSTMSNAA 391
+HTGEKPY C C K+F K+ L+ H+ K + + C CG T +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHF-KRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 392 NFKDHLDSHRGEKKYTCETCGTGF 415
H D+ G E G
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 67.9 bits (167), Expect = 8e-14
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVH----ELLKPYECDTCGHGLSSKKSLDDHYRIHTG 1538
K Y C C K ++ + H + + + + C CG + + ++ H G
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72
Query: 1539 EKKYVCQQCGASF 1551
+ G S
Sbjct: 73 PDGVEGENSGPSS 85
Score = 67.9 bits (167), Expect = 8e-14
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 5/73 (6%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVH----ELLKPYECDTCGHGLSSKKSLDDHYRIHTG 1662
K Y C C K ++ + H + + + + C CG + + ++ H G
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG 72
Query: 1663 EKKYVCQQCGASF 1675
+ G S
Sbjct: 73 PDGVEGENSGPSS 85
Score = 67.2 bits (165), Expect = 2e-13
Identities = 23/101 (22%), Positives = 32/101 (31%), Gaps = 18/101 (17%)
Query: 259 LKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVR 318
HTGEK + CS C + F K L+ H + +H
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYH---------------DPNFVPA 46
Query: 319 KYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSF 359
+ C C +F R N + H + G E G S
Sbjct: 47 AFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 65.6 bits (161), Expect = 4e-13
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 15/98 (15%)
Query: 1202 LKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETK 1261
H GE+ +C+ CDK+F Q L H + + N +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRY----HDPNFVPAA---------- 47
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSF 1299
+ C C +R +++ +H G + G S
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 64.1 bits (157), Expect = 2e-12
Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 17/98 (17%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK 625
H+GE+ Y CS C K F K L H++R H N V +
Sbjct: 5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH-------DPNFVPAA---------- 47
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSF 663
+ C C FTR +++ H G + G S
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 63.7 bits (156), Expect = 2e-12
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 1332 NLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERS----FKCSYCAMTFRCPR 1387
+ R HTGEK Y C C K F Q H + + F CS C TF
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 1388 TLTEHKKTH 1396
T+ H
Sbjct: 62 TMARHADNC 70
Score = 63.7 bits (156), Expect = 2e-12
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 1499 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE----KKYVCQQCGASFTQW 1554
+ R H KPY C C K+ LD H++ + +VC +CG +FT+
Sbjct: 2 SSGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 1555 ASLFYHKFSH 1564
++ H +
Sbjct: 61 NTMARHADNC 70
Score = 60.2 bits (147), Expect = 4e-11
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 1991 NLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH-----INAQFVCSFCGNTYKNPK 2045
+ R HTGEK Y C C +F L++H + + A FVCS CG T+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 2046 SLDSHIRNSHTNRKKSICDDCTKA 2069
++ H N ++ +
Sbjct: 62 TMARHADN-CAGPDGVEGENSGPS 84
Score = 53.3 bits (129), Expect = 1e-08
Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Query: 1652 SLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS-ETRNQK------CEESFDNCN 1704
S R HTGEK Y C C +F Q L H + C ++F N
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 1705 NLWSHMFI 1712
+ H
Sbjct: 62 TMARHADN 69
Score = 51.4 bits (124), Expect = 5e-08
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 1765 GNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVH----STLRPFLCEFCNAGFKCR 1819
G+ + H+ K + C C K+F++K LL H + F+C C F R
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 1820 KHLLQHYRTHTKPK 1833
+ +H P
Sbjct: 61 NTMARHADNCAGPD 74
Score = 49.4 bits (119), Expect = 3e-07
Identities = 22/109 (20%), Positives = 27/109 (24%), Gaps = 25/109 (22%)
Query: 696 NFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKE 755
+ H GEK Y C C F K L H + F +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN-----FVPAAF-------- 48
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSF 804
+C CG F R M RH + E S
Sbjct: 49 ------------VCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 44.8 bits (107), Expect = 1e-05
Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 392 NFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH----IKDRTYPCTYCERKYQSPK 447
+ +H GEK Y C C F K L H + + C+ C + +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 448 TLKEHLKVHTSGDVRHICQTCGSEF 472
T+ H G + G
Sbjct: 62 TMARHADNCA-GPDGVEGENSGPSS 85
Score = 43.3 bits (103), Expect = 4e-05
Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 752 TLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTE----RPYICEYCNVSFKEK 807
+ +TH +G+ + C C F ++ + H K + ++C C +F +
Sbjct: 2 SSGSSGRTH-TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 808 KSLVRHYKIHKG 819
++ RH G
Sbjct: 61 NTMARHADNCAG 72
Score = 42.1 bits (100), Expect = 8e-05
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Query: 1754 CSYCGNSYANPGNLRTHMVVH-----SNKNHICEICGKSFKKKDLLREHMIVHSTLRPFL 1808
CS+C ++ L H + +C CGK+F +++ + H +
Sbjct: 18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77
Query: 1809 CEFC 1812
E
Sbjct: 78 GENS 81
Score = 39.4 bits (93), Expect = 7e-04
Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 21/104 (20%)
Query: 90 LKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVE 148
R H+GE ++C C K+F K+ L H K +
Sbjct: 3 SGSSGR-THTGEKPYACSHCDKTFRQKQLLDMH-FKRYH------DPNFVPA-------- 46
Query: 149 GVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFG 192
+ C +CG R + H A G + G
Sbjct: 47 ---AFVCSKCGKTFTRRNTMARHA-DNCAGPDGVEGENSGPSSG 86
Score = 38.7 bits (91), Expect = 0.002
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 781 NMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKGVNTNTLP------------SN 828
+ + H+ E+PY C +C+ +F++K+ L H+K + N N
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 829 DIIKHMRN 836
+ +H N
Sbjct: 62 TMARHADN 69
Score = 37.9 bits (89), Expect = 0.003
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSF 1224
+ CS C KT+TR + H G + S
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 37.1 bits (87), Expect = 0.006
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 1794 LREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPKATNS-FSSSKCEESFDNCNN 1852
H+ +P+ C C+ F+ ++ L H++ + P + F SKC ++F N
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 1853 LWSHMFI 1859
+ H
Sbjct: 63 MARHADN 69
Score = 34.8 bits (81), Expect = 0.029
Identities = 5/38 (13%), Positives = 12/38 (31%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGF 281
F C +C +++ + + +H G
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 31.7 bits (73), Expect = 0.45
Identities = 13/111 (11%), Positives = 30/111 (27%), Gaps = 28/111 (25%)
Query: 477 NLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAFNNSQSSSSDHRLVK 536
+ + RTH ++ + C C+ + ++ L H+ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD--------------------- 40
Query: 537 SEVQILEGDRIK-YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCF 586
+ C C + +T + RH + +G
Sbjct: 41 ------PNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 28.3 bits (64), Expect = 6.8
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 889 KTHSCIYCEESFSDSKFLDAHVNIEHGKRVHGDDEFECYQCNQCG 933
K ++C +C+++F + LD H H + C++CG
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVP----AAFVCSKCG 54
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator
element, zinc finger protein, DNA- protein recognition;
HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 94.9 bits (237), Expect = 8e-23
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 1259 ETKYKCPL--CPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKV 1316
CP C + ++++H+ H G + C CGK+F LKRH +H
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VH--T 58
Query: 1317 G---YQCNV--CGRVLTDSSNLKVHMRNHTGEKKYVCEI--CGKGFTQWASHYYHKFTHS 1369
G +QC CG+ + NL+ H+R HTG++ YVC C K F Q + H TH+
Sbjct: 59 GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118
Query: 1370 EERSFK 1375
+ ++ +
Sbjct: 119 KAKNNQ 124
Score = 93.7 bits (234), Expect = 2e-22
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 1287 EKPFSCQV--CGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGEK 1344
+ +C C K F +++H + H + C CG+ +SS LK H HTGEK
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 1345 KYVCEI--CGKGFTQWASHYYHKFTHSEERSFKCSY--CAMTFRCPRTLTEHKKTH 1396
+ C CGK F+ + H H+ +R + C + C F L H TH
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 88.0 bits (219), Expect = 2e-20
Identities = 41/144 (28%), Positives = 56/144 (38%), Gaps = 32/144 (22%)
Query: 1212 ERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCPS 1269
RT++C C K F S + +H +H G + C C
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKH-LHTH-------------------GPRVHVCAECGK 42
Query: 1270 ITSRYDSLQQHMRLHTGEKPFSCQV--CGKSFAAREHLKRHFNNIHMKVG---YQCNV-- 1322
L++H +HTGEKPF C CGK F+ +L+ H IH G Y C
Sbjct: 43 AFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRIHT--GDRPYVCPFDG 99
Query: 1323 CGRVLTDSSNLKVHMRNHTGEKKY 1346
C + S+NLK H+ H K
Sbjct: 100 CNKKFAQSTNLKSHILTHAKAKNN 123
Score = 80.3 bits (199), Expect = 8e-18
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGY 378
CPH GC F+ +A+++H+ +H G + + C CGK+F +L H H G K +
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVHTGEKPF 63
Query: 379 RCHI--CGSTMSNAANFKDHLDSHRGEKKYTCET--CGTGFAYKSSLYHHRFTHIKDRTY 434
+C CG S N + H+ H G++ Y C C FA ++L H TH K +
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 79.5 bits (197), Expect = 2e-17
Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 21/127 (16%)
Query: 626 YKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YN 674
C C +F ++R H+ TH G R + C CGK+FV L RH +
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 675 CSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEI--CGTGFMYKSSLHHHKFSH 732
C+ G CG+ S N + H+ H G++ Y C C F ++L H +H
Sbjct: 65 CTFEG-------CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Query: 733 SKERMFQ 739
+K + Q
Sbjct: 118 AKAKNNQ 124
Score = 76.0 bits (188), Expect = 3e-16
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKV--CDRAFFDVY 1990
++ HL H G + + C C K FV S L+ H VH EK FQC C + F +
Sbjct: 23 MRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL-VHTGEK--PFQCTFEGCGKRFSLDF 78
Query: 1991 NLKLHMRIHTGEKKYVCET--CGASFVHWGSLNIHNYSH 2027
NL+ H+RIHTG++ YVC C F +L H +H
Sbjct: 79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 70.2 bits (173), Expect = 3e-14
Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 47/161 (29%)
Query: 1512 KPYECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRN 1569
+ C C ++ H H G + +VC +CG +F + + L H+ H+
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT---- 58
Query: 1570 QKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDI--CKKQVTNRKNMIDH 1627
+K ++C C K+ + N+ H
Sbjct: 59 -----------------------------------GEKPFQCTFEGCGKRFSLDFNLRTH 83
Query: 1628 QRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEKKY 1666
R +H +PY C C + +L H H K
Sbjct: 84 VR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 69.9 bits (172), Expect = 4e-14
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 1945 EKDYACHI--CNKVFVRHSTLENHMKAVH-EKIRDFQCKVCDRAFFDVYNLKLHMRIHTG 2001
+ AC C K+F +S + H+ H + C C +AF + LK H +HTG
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLH-THGPR--VHVCAECGKAFVESSKLKRHQLVHTG 59
Query: 2002 EKKYVC--ETCGASFVHWGSLNIHNYSHINAQ-FVCSF--CGNTYKNPKSLDSHIRNSHT 2056
EK + C E CG F +L H H + +VC F C + +L SHI +H
Sbjct: 60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL-THA 118
Score = 69.5 bits (171), Expect = 6e-14
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 25/129 (19%)
Query: 244 FKCP--ECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTS 301
CP C + + + S ++KHL H G + VC+ C + F ++L H + VH
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVH------ 57
Query: 302 RDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC--EACGKSF 359
T G + ++C GC F L+ H+ HTG++PY C + C K F
Sbjct: 58 ----------T---GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104
Query: 360 PLKRRLNAH 368
L +H
Sbjct: 105 AQSTNLKSH 113
Score = 69.1 bits (170), Expect = 8e-14
Identities = 34/156 (21%), Positives = 51/156 (32%), Gaps = 47/156 (30%)
Query: 1539 EKKYVC--QQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFT 1596
+ C + C F +++ H +H
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGP------------------------------ 32
Query: 1597 ERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLD 1654
+++ C C K + HQ VH KP++C CG S +L
Sbjct: 33 ----------RVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLR 81
Query: 1655 DHYRIHTGEKKYVC--QQCGASFTQWASLFYHKFSH 1688
H RIHTG++ YVC C F Q +L H +H
Sbjct: 82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 67.9 bits (167), Expect = 2e-13
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 11/113 (9%)
Query: 1607 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
+ C C K + M H + + + C CG L H +HTGEK
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGP--RVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 1665 KYVC--QQCGASFTQWASLFYHKFSHS-----ETRNQKCEESFDNCNNLWSHM 1710
+ C + CG F+ +L H H+ C + F NL SH+
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114
Score = 67.9 bits (167), Expect = 2e-13
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 1751 RCVCSYCGNSYANPGNLRTHMVVHSNKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
C C + + +R H+ H + H+C CGK+F + L+ H +VH+ +PF C
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCT 66
Query: 1811 F--CNAGFKCRKHLLQHYRTHT--KPKATNSF--SSSKCEESFDNCNNLWSHM 1857
F C F +L H R HT +P + C + F NL SH+
Sbjct: 67 FEGCGKRFSLDFNLRTHVRIHTGDRP-----YVCPFDGCNKKFAQSTNLKSHI 114
Score = 66.4 bits (163), Expect = 6e-13
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 23/114 (20%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSV--CQRGFFMKNRLNEHYKRVHH 296
G +V C EC +++ S+LK+H VHTGEK F C+ C + F + L H R+H
Sbjct: 31 GPRV-HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRIH- 87
Query: 297 MNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPY 350
T G R Y CP GC F + L+ H+L+H K
Sbjct: 88 ---------------T---GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 66.4 bits (163), Expect = 7e-13
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 32/142 (22%)
Query: 682 YQCNI--CGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQ 739
C C ++ D++ + HL H G + + C CG F+ S L H+ H+ E+ FQ
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 740 CSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEY 799
C+F CG F+ N+ H ++H+ +RPY+C +
Sbjct: 65 CTFEG---------------------------CGKRFSLDFNLRTHVRIHTGDRPYVCPF 97
Query: 800 --CNVSFKEKKSLVRHYKIHKG 819
CN F + +L H H
Sbjct: 98 DGCNKKFAQSTNLKSHILTHAK 119
Score = 64.8 bits (159), Expect = 2e-12
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEK 1540
+++ C C K + HQ VH KP++C CG S +L H RIHTG++
Sbjct: 33 RVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91
Query: 1541 KYVC--QQCGASFTQWASLFYHKFSH 1564
YVC C F Q +L H +H
Sbjct: 92 PYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 64.5 bits (158), Expect = 3e-12
Identities = 38/130 (29%), Positives = 53/130 (40%), Gaps = 28/130 (21%)
Query: 549 YKCPL--CDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSM 606
CP C +++ S ++H H G R + C+ C K F ++L H + VH
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRH-QLVHT----- 58
Query: 607 ARTNDVKKSAEISVDGVTKYKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTCDV--CGKS 662
G ++C C F+ +LR HVR HTGDRPY C C K
Sbjct: 59 ---------------GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK 103
Query: 663 FVAKKHLNRH 672
F +L H
Sbjct: 104 FAQSTNLKSH 113
Score = 64.1 bits (157), Expect = 5e-12
Identities = 22/86 (25%), Positives = 32/86 (37%), Gaps = 6/86 (6%)
Query: 1483 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
+ C C K + M H + + + C CG L H +HTGEK
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGP--RVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 1541 KYVC--QQCGASFTQWASLFYHKFSH 1564
+ C + CG F+ +L H H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIH 87
Score = 60.2 bits (147), Expect = 1e-10
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 1920 FKCPDCPTILQTFRGLKAHLDIHSGEKDYACHI--CNKVFVRHSTLENHMKAVHEKIRDF 1977
C +C LK H +H+GEK + C C K F L H++ +H R +
Sbjct: 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPY 93
Query: 1978 QCKV--CDRAFFDVYNLKLHMRIHTGEKKY 2005
C C++ F NLK H+ H K
Sbjct: 94 VCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 60.2 bits (147), Expect = 1e-10
Identities = 34/145 (23%), Positives = 58/145 (40%), Gaps = 36/145 (24%)
Query: 347 EKPYTC--EACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEK 404
+ C + C K F + + + HL +H G +
Sbjct: 3 PRTIACPHKGCTKMF----------------------------RDNSAMRKHLHTH-GPR 33
Query: 405 KYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTY--CERKYQSPKTLKEHLKVHTSGDVR 462
+ C CG F S L H+ H ++ + CT+ C +++ L+ H+++HT GD
Sbjct: 34 VHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHT-GDRP 92
Query: 463 HICQT--CGSEFHTRKNLLTHIRTH 485
++C C +F NL +HI TH
Sbjct: 93 YVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 56.8 bits (138), Expect = 2e-09
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 1753 VCSYCGNSYANPGNLRTHMVVHSN-KNHICEI--CGKSFKKKDLLREHMIVHSTLRPFLC 1809
VC+ CG ++ L+ H +VH+ K C CGK F LR H+ +H+ RP++C
Sbjct: 36 VCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95
Query: 1810 EF--CNAGFKCRKHLLQHYRTHTKPK 1833
F CN F +L H TH K K
Sbjct: 96 PFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 52.5 bits (127), Expect = 5e-08
Identities = 34/177 (19%), Positives = 49/177 (27%), Gaps = 59/177 (33%)
Query: 1370 EERSFKCSY--CAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHST 1427
E R+ C + C FR + +H TH HVC CG + L H +H+
Sbjct: 2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH--GPRVHVCAECGKAFVESSKLKRHQLVHTG 59
Query: 1428 GRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYEC 1487
+P QC C
Sbjct: 60 EKPFQCTF-------------------------------------------------EGC 70
Query: 1488 DICKKQVTNRKNMIDHQRSVHELLKPYECDT--CGHGLSSKKSLDDHYRIHTGEKKY 1542
K+ + N+ H R +H +PY C C + +L H H K
Sbjct: 71 G---KRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 51.7 bits (125), Expect = 9e-08
Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 66/179 (36%)
Query: 1636 KPYECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRN 1693
+ C C ++ H H G + +VC +CG + F S
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKA-----------FVES---- 47
Query: 1694 QKCEESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQ--R 1751
+ L H + HT ++ +
Sbjct: 48 ----------SKLKRHQLV---------------------------------HTGEKPFQ 64
Query: 1752 CVCSYCGNSYANPGNLRTHMVVHS-NKNHICEI--CGKSFKKKDLLREHMIVHSTLRPF 1807
C CG ++ NLRTH+ +H+ ++ ++C C K F + L+ H++ H+ +
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 32.5 bits (75), Expect = 0.53
Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 35/137 (25%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAFNN 524
+ C F + H+ TH R HVC C L RH H
Sbjct: 10 HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH----------- 57
Query: 525 SQSSSSDHRLVKSEVQILEGDRIKYKCPL--CDRIYTSFSETKRHFEVHSGERKYTCSI- 581
G++ ++C C + ++ + H +H+G+R Y C
Sbjct: 58 ------------------TGEK-PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 98
Query: 582 -CSKCFFIKNRLSEHYR 597
C+K F L H
Sbjct: 99 GCNKKFAQSTNLKSHIL 115
Score = 29.4 bits (67), Expect = 5.5
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 69 IDGEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSC--DECSKSFTTKKCLREHYKKL 125
G C +C + LK+H H+GE F C + C K F+ LR H ++
Sbjct: 29 THGPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTH-VRI 86
Query: 126 HT 127
HT
Sbjct: 87 HT 88
Score = 28.6 bits (65), Expect = 9.2
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 35/125 (28%)
Query: 89 YLKKHVRDNHSGETFSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVE 148
++KH+ H C EC K+F L+ H + +HT
Sbjct: 22 AMRKHLH-THGPRVHVCAECGKAFVESSKLKRH-QLVHT--------------------- 58
Query: 149 GVVKYKCP--ECGFMVKRFQ---GLREHIVSVHAQVKDHVCIV--CGAAFGLARRLKTHY 201
G ++C CG KRF LR H V +H + +VC C F + LK+H
Sbjct: 59 GEKPFQCTFEGCG---KRFSLDFNLRTH-VRIHTGDRPYVCPFDGCNKKFAQSTNLKSH- 113
Query: 202 IRRHT 206
I H
Sbjct: 114 ILTHA 118
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper,
X-RAY crystallography, structure-based design, zinc
fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
PDB: 1xf7_A
Length = 88
Score = 87.6 bits (218), Expect = 9e-21
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCN 1321
++C +C SR D L H+R HTGEKPF+C +CG+ FA + KRH +I + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQHILPILED 62
Query: 1322 VCGRVLTDSSNLKVH---MRNHTGEK 1344
+L+ + +L+ ++ GE+
Sbjct: 63 KVEELLSKNYHLENEVARLKKLVGER 88
Score = 76.8 bits (190), Expect = 5e-17
Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+QC +C R + S +L H+R HTGEK + C+ICG+ F + H+
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILED 62
Query: 1378 YCAMTFRCPRTLTEHK---KTH 1396
L K
Sbjct: 63 KVEELLSKNYHLENEVARLKKL 84
Score = 75.6 bits (187), Expect = 2e-16
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 10/91 (10%)
Query: 1288 KPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMRNHTGEK 1344
KPF C++C ++F+ +HL H H G + C++CGR S K H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTH-IRTH--TGEKPFACDICGRKFARSDERKRHRDIQH-IL 57
Query: 1345 KYVCEICGKGFTQWAS---HYYHKFTHSEER 1372
+ + + ++ ER
Sbjct: 58 PILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 74.1 bits (183), Expect = 6e-16
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCN 685
++C IC F+R D L H+RTHTG++P+ CD+CG+ F RH + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD-IQHILPILED 62
Query: 686 ICGRVMSDSTNFKDHLDN---HKGEK 708
++S + + ++ + GE+
Sbjct: 63 KVEELLSKNYHLENEVARLKKLVGER 88
Score = 67.5 bits (166), Expect = 9e-14
Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 1946 KDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
K + C IC + F R L H++ H EK F C +C R F K H I
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTGEK--PFACDICGRKFARSDERKRHRDIQH-IL 57
Query: 2004 KYVCETCGASFVHWGSLNIHN 2024
+ + L
Sbjct: 58 PILEDKVEELLSKNYHLENEV 78
Score = 65.6 bits (161), Expect = 4e-13
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKL 1994
L H+ H+GEK +AC IC + F R + H H + Y+L+
Sbjct: 19 LTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHIL--PILEDKVEELLSKNYHLEN 76
Query: 1995 H---MRIHTGEK 2003
++ GE+
Sbjct: 77 EVARLKKLVGER 88
Score = 65.6 bits (161), Expect = 6e-13
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K ++C IC + + ++ H R H KP+ CD CG + H I
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQH-ILPI 59
Query: 1543 VCQQCGASFTQWASLFYHK 1561
+ + ++ L
Sbjct: 60 LEDKVEELLSKNYHLENEV 78
Score = 65.6 bits (161), Expect = 6e-13
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
K ++C IC + + ++ H R H KP+ CD CG + H I
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQH-ILPI 59
Query: 1667 VCQQCGASFTQWASLFYHK 1685
+ + ++ L
Sbjct: 60 LEDKVEELLSKNYHLENEV 78
Score = 64.4 bits (158), Expect = 1e-12
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSF 2036
FQC++C R F +L H+R HTGEK + C+ CG F H +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 2037 CGNTYKNPKSLDSHIRNS--HTNRK 2059
L++ + +
Sbjct: 64 VEELLSKNYHLENEVARLKKLVGER 88
Score = 64.1 bits (157), Expect = 1e-12
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 317 VRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGK 376
++ ++C C +F R + L H+ +HTGEKP+ C+ CG+ F H
Sbjct: 1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQHIL 57
Query: 377 GYRCHICG---STMSNAANFKDHLDSHRGEK 404
S + N L GE+
Sbjct: 58 PILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 64.1 bits (157), Expect = 1e-12
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 2/78 (2%)
Query: 1635 LKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSET--R 1692
+KP++C C S L H R HTGEK + C CG F + H+
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPIL 60
Query: 1693 NQKCEESFDNCNNLWSHM 1710
K EE +L + +
Sbjct: 61 EDKVEELLSKNYHLENEV 78
Score = 60.6 bits (148), Expect = 3e-11
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 652 RPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDHLDNHKGEKKY 710
+P+ C +C ++F HL H +H G + C+ICGR + S K H D
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 711 TCEICGTGFMYKSSLHHHK 729
+ L +
Sbjct: 60 LEDKVEELLSKNYHLENEV 78
Score = 60.6 bits (148), Expect = 3e-11
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 1511 LKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSE 1566
+KP++C C S L H R HTGEK + C CG F + H+
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56
Score = 59.0 bits (144), Expect = 1e-10
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFC 1812
C C +++ +L TH+ H+ K C+ICG+ F + D + H + + P L +
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKV 64
Query: 1813 NAGFKCRKHL---LQHYRTHT 1830
HL + +
Sbjct: 65 EELLSKNYHLENEVARLKKLV 85
Score = 58.7 bits (143), Expect = 1e-10
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+QC IC R S S + H+ H GEK + C+ICG F H+
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILED 62
Query: 742 FCEKKYMSPKTLKEHEQTHR 761
E+ L+ +
Sbjct: 63 KVEELLSKNYHLENEVARLK 82
Score = 54.8 bits (133), Expect = 3e-09
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYP 435
K ++C IC S + + H+ +H GEK + C+ CG FA HR
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60
Query: 436 CTYCERKY-QSP--KTLKEHLKVHT 457
E ++ + LK
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLV 85
Score = 54.4 bits (132), Expect = 4e-09
Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT-KPKATNSFS 1839
C IC ++F + D L H+ H+ +PF C+ C F +H P
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP-----IL 60
Query: 1840 SSKCEESFDNCNNLWSHM 1857
K EE +L + +
Sbjct: 61 EDKVEELLSKNYHLENEV 78
Score = 53.3 bits (129), Expect = 1e-08
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 26/108 (24%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRD 303
F+C C R++ L H+ HTGEK F C +C R F + H + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQ-------- 54
Query: 304 HDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLS---HTGEK 348
+ L+ + GE+
Sbjct: 55 ------HI------LPILEDK--VEELLSKNYHLENEVARLKKLVGER 88
Score = 51.7 bits (125), Expect = 3e-08
Identities = 18/124 (14%), Positives = 29/124 (23%), Gaps = 50/124 (40%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
++C +C R ++ H H+GE+ + C IC +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK----------------------- 40
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKH 668
F R D + H P D + H
Sbjct: 41 --------------------------FARSDERKRHRDIQHI-LPILEDKVEELLSKNYH 73
Query: 669 LNRH 672
L
Sbjct: 74 LENE 77
Score = 49.4 bits (119), Expect = 3e-07
Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDH---YRIHTGE 1663
K + CDIC ++ H+ H P D LS L++ + GE
Sbjct: 30 KPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVARLKKLVGE 87
Query: 1664 K 1664
+
Sbjct: 88 R 88
Score = 49.0 bits (118), Expect = 3e-07
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Query: 1344 KKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKH 1403
K + C IC + F++ H TH+ E+ F C C F H+ +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ--HILPI 59
Query: 1404 VCNTCGNEYNTRKNLLSH---MKIHSTG 1428
+ + + +L + +K G
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKL-VG 86
Score = 47.5 bits (114), Expect = 1e-06
Identities = 20/115 (17%), Positives = 29/115 (25%), Gaps = 33/115 (28%)
Query: 708 KKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKH 767
K + C IC F L H +H+ E+ F C C +K+ K H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ------- 54
Query: 768 ICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSL---VRHYKIHKG 819
P + + + L V K G
Sbjct: 55 -----------------------HILPILEDKVEELLSKNYHLENEVARLKKLVG 86
Score = 42.5 bits (101), Expect = 7e-05
Identities = 21/139 (15%), Positives = 36/139 (25%), Gaps = 59/139 (42%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVT 1464
C C ++ +L +H++ H+ +P CD+C KF
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF------------------------ 41
Query: 1465 AKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLS 1524
+ S H+ H P D LS
Sbjct: 42 ----------ARSD--------------------ERKRHRDIQHI--LPILEDKVEELLS 69
Query: 1525 SKKSLDDH---YRIHTGEK 1540
L++ + GE+
Sbjct: 70 KNYHLENEVARLKKLVGER 88
Score = 38.2 bits (90), Expect = 0.002
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 1804 LRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEESFDNCNNLWSHMFIKH 1861
++PF C C F HL H RTHT KP F+ C F + H I+H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP-----FACDICGRKFARSDERKRHRDIQH 55
Query: 1862 ENSDFVCNLCPPDSKIVIKYAHL--LVRHMKKH 1892
+ + +++ K HL V +KK
Sbjct: 56 ILP-ILEDKV---EELLSKNYHLENEVARLKKL 84
Score = 34.0 bits (79), Expect = 0.069
Identities = 8/54 (14%), Positives = 15/54 (27%), Gaps = 3/54 (5%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEH--YRRVH 600
+ C +C R + E KRH ++ + L +
Sbjct: 32 FACDICGRKFARSDERKRHRDIQ-HILPILEDKVEELLSKNYHLENEVARLKKL 84
Score = 30.9 bits (71), Expect = 0.73
Identities = 18/121 (14%), Positives = 26/121 (21%), Gaps = 39/121 (32%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
++C C R L HI H K C +CG F + K H
Sbjct: 4 FQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRH-RDIQH------ 55
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLA---VHTGE 269
+ L+ +A GE
Sbjct: 56 ---------------------------IL-PILEDKVEELLSKNYHLENEVARLKKLVGE 87
Query: 270 K 270
+
Sbjct: 88 R 88
Score = 30.2 bits (69), Expect = 1.5
Identities = 15/106 (14%), Positives = 27/106 (25%), Gaps = 26/106 (24%)
Query: 103 FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMV 162
F C C ++F+ L H + HT G + C CG
Sbjct: 4 FQCRICMRNFSRSDHLTTH-IRTHT---------------------GEKPFACDICGRKF 41
Query: 163 KRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTH--YIRRHT 206
R + H + + L+ +++
Sbjct: 42 ARSDERKRHR-DIQHI-LPILEDKVEELLSKNYHLENEVARLKKLV 85
Score = 29.8 bits (68), Expect = 2.4
Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 7/60 (11%)
Query: 71 GEIKFQCPDCHTMMKNFA---YLKKHVRDNHSGETFSCDECSKSFTTKKCLREHYKKLHT 127
GE F C C + FA K+H D+ + + L +L
Sbjct: 28 GEKPFACDICG---RKFARSDERKRHRD-IQHILPILEDKVEELLSKNYHLENEVARLKK 83
Score = 29.0 bits (66), Expect = 3.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTH 513
C+ C F +L THIRTH ++ C++C RH
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
g.37.1.1
Length = 95
Score = 86.0 bits (214), Expect = 4e-20
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMRNH 1340
+G +C++CGK F HL RH H G Y C VCG + H+R+H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRH-KLSH--SGEKPYSCPVCGLRFKRKDRMSYHVRSH 58
Query: 1341 TGE--KKYVCEICGKGFTQWASHYYH-KFTHSEERS 1373
G K Y+C+ CGKGF++ H K HS S
Sbjct: 59 DGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPSS 94
Score = 82.5 bits (205), Expect = 7e-19
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH---M 1314
G + C +C I L +H H+GEKP+SC VCG F ++ + H H +
Sbjct: 4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSV 62
Query: 1315 KVGYQCNVCGRVLTDSSNLKVHM-RNHTGEK 1344
Y C CG+ + +L H+ + H+G
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 76.4 bits (189), Expect = 1e-16
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNLKLHMRIH 1999
SG AC IC K+F L H H EK + C VC F + H+R H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKL-SHSGEK--PYSCPVCGLRFKRKDRMSYHVRSH 58
Query: 2000 TGE--KKYVCETCGASFVHWGSLNIH 2023
G K Y+C++CG F LN H
Sbjct: 59 DGSVGKPYICQSCGKGFSRPDHLNGH 84
Score = 76.0 bits (188), Expect = 1e-16
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 21/107 (19%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCP 1268
G ++C +C K F V L H K SH GE Y CP+C
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRH-KLSH------------------SGEKPYSCPVCG 42
Query: 1269 SITSRYDSLQQHMRLHTGE--KPFSCQVCGKSFAAREHLKRHFNNIH 1313
R D + H+R H G KP+ CQ CGK F+ +HL H +H
Sbjct: 43 LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 72.5 bits (179), Expect = 2e-15
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLS 1399
+G CEICGK F HK +HS E+ + C C + F+ ++ H ++H S
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 1400 DVK-HVCNTCGNEYNTRKNLLSHMKIHSTG 1428
K ++C +CG ++ +L H+K +G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 69.8 bits (172), Expect = 2e-14
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG---Y 682
C IC IF L H +H+G++PY+C VCG F K ++ H SH G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPY 66
Query: 683 QCNICGRVMSDSTNFKDHLDN-HKGEK 708
C CG+ S + H+ H G
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 69.1 bits (170), Expect = 3e-14
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE--K 1540
C+IC K + ++ H+ H KPY C CG K + H R H G K
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64
Query: 1541 KYVCQQCGASFTQWASLFYH 1560
Y+CQ CG F++ L H
Sbjct: 65 PYICQSCGKGFSRPDHLNGH 84
Score = 69.1 bits (170), Expect = 3e-14
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE--K 1664
C+IC K + ++ H+ H KPY C CG K + H R H G K
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64
Query: 1665 KYVCQQCGASFTQWASLFYH 1684
Y+CQ CG F++ L H
Sbjct: 65 PYICQSCGKGFSRPDHLNGH 84
Score = 68.3 bits (168), Expect = 8e-14
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH---INAQFV 2033
C++C + F DVY+L H H+GEK Y C CG F ++ H SH + ++
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 2034 CSFCGNTYKNPKSLDSHIRNSHT 2056
C CG + P L+ HI+ H+
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHS 90
Score = 67.9 bits (167), Expect = 8e-14
Identities = 31/132 (23%), Positives = 43/132 (32%), Gaps = 43/132 (32%)
Query: 1536 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALF 1595
+G C+ CG F L HK SHS
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHS------------------------------ 31
Query: 1596 TERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVH--ELLKPYECDTCGHGLSSKKSL 1653
+K Y C +C + + M H R H + KPY C +CG G S L
Sbjct: 32 ---------GEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHL 81
Query: 1654 DDHY-RIHTGEK 1664
+ H ++H+G
Sbjct: 82 NGHIKQVHSGPS 93
Score = 67.9 bits (167), Expect = 9e-14
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 23/111 (20%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHI 630
SG C IC K F L+ H + H G Y C +
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRH-KLSHS--------------------GEKPYSCPV 40
Query: 631 CDSIFTRYDSLRLHVRTHTG--DRPYTCDVCGKSFVAKKHLNRHYNCSHAG 679
C F R D + HVR+H G +PY C CGK F HLN H H+G
Sbjct: 41 CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 66.4 bits (163), Expect = 4e-13
Identities = 30/84 (35%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 648 HTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDHLDNHKG 706
+G C++CGK F HLNRH SH+G Y C +CG H+ +H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Query: 707 E--KKYTCEICGTGFMYKSSLHHH 728
K Y C+ CG GF L+ H
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGH 84
Score = 66.0 bits (162), Expect = 5e-13
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS--ETRN 1693
C+ CG L+ H H+GEK Y C CG F + + YH SH +
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65
Query: 1694 QKCEE---SFDNCNNLWSHM 1710
C+ F ++L H+
Sbjct: 66 YICQSCGKGFSRPDHLNGHI 85
Score = 64.4 bits (158), Expect = 2e-12
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 1920 FKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDF 1977
C C I + L H HSGEK Y+C +C F R + H++ H + +
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPY 66
Query: 1978 QCKVCDRAFFDVYNLKLHM-RIHTGEK 2003
C+ C + F +L H+ ++H+G
Sbjct: 67 ICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 63.7 bits (156), Expect = 3e-12
Identities = 30/117 (25%), Positives = 42/117 (35%), Gaps = 31/117 (26%)
Query: 344 HTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGE 403
+G CE CGK F + + H SH GE
Sbjct: 2 SSGSSGVACEICGKIF----------------------------RDVYHLNRHKLSHSGE 33
Query: 404 KKYTCETCGTGFAYKSSLYHHRFTHI--KDRTYPCTYCERKYQSPKTLKEHLK-VHT 457
K Y+C CG F K + +H +H + Y C C + + P L H+K VH+
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 63.7 bits (156), Expect = 3e-12
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
C+ CG L+ H H+GEK Y C CG F + + YH SH
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58
Score = 63.3 bits (155), Expect = 4e-12
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 24/112 (21%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHP 325
+G C +C + F LN H K H G + Y CP
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRH-KLSH-------------------SGEKPYSCPV- 40
Query: 326 GCPSSFQRFNALQEHMLSHTGE--KPYTCEACGKSFPLKRRLNAHYNKWHLG 375
C F+R + + H+ SH G KPY C++CGK F LN H + H G
Sbjct: 41 -CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 62.1 bits (152), Expect = 9e-12
Identities = 33/112 (29%), Positives = 42/112 (37%), Gaps = 33/112 (29%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYR 379
C C F+ L H LSH+GEKPY+C CG F K R++ H
Sbjct: 8 VACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR--------- 56
Query: 380 CHICGSTMSNAANFKDHLDSHRGE--KKYTCETCGTGFAYKSSL-YHHRFTH 428
SH G K Y C++CG GF+ L H + H
Sbjct: 57 -------------------SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 60.2 bits (147), Expect = 4e-11
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHS--TLRPFLCE 1810
C CG + + +L H + HS K + C +CG FK+KD + H+ H +P++C+
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 1811 FCNAGFKCRKHLLQHY-RTHTKPKA 1834
C GF HL H + H+ P +
Sbjct: 70 SCGKGFSRPDHLNGHIKQVHSGPSS 94
Score = 57.5 bits (140), Expect = 4e-10
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSG 763
G CEICG F L+ HK SHS E+ + C C ++ + H ++H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 764 DIK-HICDTCGSEFNTRKNMLRHTK-VHSTER 793
K +IC +CG F+ ++ H K VHS
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 53.3 bits (129), Expect = 1e-08
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT----KP 1832
CEICGK F+ L H + HS +P+ C C FK + + H R+H KP
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65
Query: 1833 KATNSFSSSKCEESFDNCNNLWSHM 1857
+ C + F ++L H+
Sbjct: 66 -----YICQSCGKGFSRPDHLNGHI 85
Score = 52.5 bits (127), Expect = 2e-08
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVH--ELLKPYECDTCGHGLSSKKSLDDHY-RIHTGE 1539
K Y C +C + + M H R H + KPY C +CG G S L+ H ++H+G
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92
Query: 1540 K 1540
Sbjct: 93 S 93
Score = 46.3 bits (111), Expect = 3e-06
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGE--KHFVCSVCQRGFFMKNRLNEHYKRVH 295
GEK + CP C + + H+ H G K ++C C +GF + LN H K+VH
Sbjct: 32 GEK-PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 45.9 bits (110), Expect = 5e-06
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
C+ CG F ++ RH HS E+PY C C + FK K + H + H G
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Score = 45.6 bits (109), Expect = 6e-06
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 1999 HTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNSHT- 2056
+G CE CG F LN H SH + + C CG +K + H+R SH
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG 60
Query: 2057 -NRKKSICDDCTKAMS 2071
K IC C K S
Sbjct: 61 SVGKPYICQSCGKGFS 76
Score = 45.6 bits (109), Expect = 7e-06
Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 11/94 (11%)
Query: 1660 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFIKH-- 1714
+G C+ CG F L HK SHS + C F + + H+ H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS-HDG 60
Query: 1715 -EDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHT 1747
++C C K + HL H+K+ H+
Sbjct: 61 SVGKPYICQSC---GKGFSRPDHLN-GHIKQVHS 90
Score = 39.0 bits (92), Expect = 0.001
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET---FSCDECSKSFTTKKCLREHYKKLHT 127
GE + CP C K + HVR +H G + C C K F+ L H K++H+
Sbjct: 32 GEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 38.2 bits (90), Expect = 0.003
Identities = 18/86 (20%), Positives = 26/86 (30%), Gaps = 29/86 (33%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTSG 459
G CE CG F L H+ +H SG
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSH-----------------------------SG 32
Query: 460 DVRHICQTCGSEFHTRKNLLTHIRTH 485
+ + C CG F + + H+R+H
Sbjct: 33 EKPYSCPVCGLRFKRKDRMSYHVRSH 58
Score = 37.5 bits (88), Expect = 0.005
Identities = 29/112 (25%), Positives = 38/112 (33%), Gaps = 26/112 (23%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCP 156
SG + +C+ C K F L H K H+ G Y CP
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRH-KLSHS---------------------GEKPYSCP 39
Query: 157 ECGFMVKRFQGLREHIVSVHA--QVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
CG KR + H V H K ++C CG F L H + H+
Sbjct: 40 VCGLRFKRKDRMSYH-VRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 35.9 bits (84), Expect = 0.018
Identities = 25/120 (20%), Positives = 36/120 (30%), Gaps = 36/120 (30%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
C CG + + L H H+ K + C VCG F R+ H +R H
Sbjct: 8 VACEICGKIFRDVYHLNRHK-LSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHD------ 59
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVK-FKCPECPRSYGNFSELKKHL-AVHTGEK 270
G K + C C + + L H+ VH+G
Sbjct: 60 --------------------------GSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 32.8 bits (76), Expect = 0.20
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 789 HSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S CE C F++ L RH H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG 32
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 85.6 bits (213), Expect = 5e-20
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 30/113 (26%)
Query: 1262 YKCPL--CPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQ 1319
Y CP+ C S+ SL +H+R+HTG+KPF C++C ++F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF-------------------- 44
Query: 1320 CNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
+ S +L H+R HTGEK + C+ICG+ F + H H ++
Sbjct: 45 --------SRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 79.4 bits (197), Expect = 6e-18
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 1318 YQCNV--CGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFK 1375
Y C V C R + S +L H+R HTG+K + C IC + F++ H TH+ E+ F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 1376 CSYCAMTFRCPRTLTEHKKTH 1396
C C F H K H
Sbjct: 65 CDICGRKFARSDERKRHTKIH 85
Score = 76.4 bits (189), Expect = 1e-16
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 47/125 (37%)
Query: 1220 CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQ 1279
CD+ F Q LT H R H G+ ++C +C SR D L
Sbjct: 12 CDRRFSQSGSLTRH-IRIH------------------TGQKPFQCRICMRNFSRSDHLTT 52
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
H+R HTGEKPF+C +CG+ F S K H +
Sbjct: 53 HIRTHTGEKPFACDICGRKF----------------------------ARSDERKRHTKI 84
Query: 1340 HTGEK 1344
H +K
Sbjct: 85 HLRQK 89
Score = 73.7 bits (182), Expect = 8e-16
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 28/109 (25%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYR 379
Y CP C F + +L H+ HTG+KP+ C C ++F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF-------------------- 44
Query: 380 CHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
S + + H+ +H GEK + C+ CG FA H H
Sbjct: 45 --------SRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85
Score = 73.3 bits (181), Expect = 9e-16
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 1945 EKDYACHI--CNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNLKLHMRIHT 2000
E+ YAC + C++ F + +L H++ +H +K FQC++C R F +L H+R HT
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIR-IHTGQK--PFQCRICMRNFSRSDHLTTHIRTHT 58
Query: 2001 GEKKYVCETCGASFVHWGSLNIH 2023
GEK + C+ CG F H
Sbjct: 59 GEKPFACDICGRKFARSDERKRH 81
Score = 72.1 bits (178), Expect = 3e-15
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 30/113 (26%)
Query: 626 YKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQ 683
Y C + CD F++ SL H+R HTG +P+ C +C ++F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF-------------------- 44
Query: 684 CNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
S S + H+ H GEK + C+ICG F H H +++
Sbjct: 45 --------SRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 69.8 bits (172), Expect = 2e-14
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNL 1992
L H+ IH+G+K + C IC + F R L H++ H EK F C +C R F
Sbjct: 22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEK--PFACDICGRKFARSDER 78
Query: 1993 KLHMRIHTGEK 2003
K H +IH +K
Sbjct: 79 KRHTKIHLRQK 89
Score = 66.3 bits (163), Expect = 3e-13
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 1483 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
+ Y C + C ++ + ++ H R +H KP++C C S L H R HTGEK
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 1541 KYVCQQCGASFTQWASLFYHKFSH 1564
+ C CG F + H H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85
Score = 66.3 bits (163), Expect = 3e-13
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 1607 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
+ Y C + C ++ + ++ H R +H KP++C C S L H R HTGEK
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 1665 KYVCQQCGASFTQWASLFYHKFSH 1688
+ C CG F + H H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIH 85
Score = 66.3 bits (163), Expect = 3e-13
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 1751 RCVCSYCGNSYANPGNLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
C C ++ G+L H+ +H+ K C IC ++F + D L H+ H+ +PF C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 1810 EFCNAGFKCRKHLLQHYRTHTKPK 1833
+ C F +H + H + K
Sbjct: 66 DICGRKFARSDERKRHTKIHLRQK 89
Score = 59.4 bits (145), Expect = 8e-11
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 682 YQCNI--CGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQ 739
Y C + C R S S + H+ H G+K + C IC F L H +H+ E+ F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 740 CSFCEKKYMSPKTLKEHEQTH 760
C C +K+ K H + H
Sbjct: 65 CDICGRKFARSDERKRHTKIH 85
Score = 58.6 bits (143), Expect = 2e-10
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 1977 FQCKV--CDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FV 2033
+ C V CDR F +L H+RIHTG+K + C C +F L H +H + F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 2034 CSFCGNTYKNPKSLDSHIRNSHTNRK 2059
C CG + H + H +K
Sbjct: 65 CDICGRKFARSDERKRHTK-IHLRQK 89
Score = 58.2 bits (142), Expect = 2e-10
Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 52/127 (40%)
Query: 244 FKCP--ECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTS 301
+ CP C R + L +H+ +HTG+K F C +C R
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMR---------------------- 42
Query: 302 RDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPL 361
+F R + L H+ +HTGEKP+ C+ CG+ F
Sbjct: 43 ----------------------------NFSRSDHLTTHIRTHTGEKPFACDICGRKFAR 74
Query: 362 KRRLNAH 368
H
Sbjct: 75 SDERKRH 81
Score = 51.3 bits (124), Expect = 5e-08
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
K ++C IC + + ++ H R H KP+ CD CG + H +IH +K
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 51.3 bits (124), Expect = 5e-08
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
K ++C IC + + ++ H R H KP+ CD CG + H +IH +K
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 50.9 bits (123), Expect = 9e-08
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 735 ERMFQCSF--CEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTE 792
ER + C C++++ +L H + H +G C C F+ ++ H + H+ E
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 793 RPYICEYCNVSFKEKKSLVRHYKIHKG 819
+P+ C+ C F RH KIH
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLR 87
Score = 47.5 bits (114), Expect = 1e-06
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
G+K F+C C R++ L H+ HTGEK F C +C R F + H ++H
Sbjct: 31 GQK-PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-TKIH 85
Score = 46.3 bits (111), Expect = 3e-06
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
++C C + ++R L H+ H GE+ +C +C + F + H + H
Sbjct: 35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-TKIH 85
Score = 40.5 bits (96), Expect = 3e-04
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 31/107 (28%)
Query: 1343 EKKYVCEI--CGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSD 1400
E+ Y C + C + F+Q S H H+ ++ F+C C F
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSR--------------- 46
Query: 1401 VKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLK 1447
+L +H++ H+ +P CD+C KF K
Sbjct: 47 --------------SDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79
Score = 38.6 bits (91), Expect = 0.002
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
++C +C R ++ H H+GE+ + C IC + F + H ++H
Sbjct: 35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-TKIH 85
Score = 37.8 bits (89), Expect = 0.003
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 9/61 (14%)
Query: 71 GEIKFQCPDCHTMMKNF---AYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLH 126
G+ FQC C M+NF +L H+R H+GE F+CD C + F + H K+H
Sbjct: 31 GQKPFQCRIC---MRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRH-TKIH 85
Query: 127 T 127
Sbjct: 86 L 86
Score = 35.5 bits (83), Expect = 0.021
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 434 YPCTY--CERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTH 491
Y C C+R++ +L H+++HT G C+ C F +L THIRTH ++
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHT-GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 492 VCELCNANLKTRRSLLRHYTTH 513
C++C RH H
Sbjct: 64 ACDICGRKFARSDERKRHTKIH 85
Score = 29.7 bits (68), Expect = 2.5
Identities = 29/165 (17%), Positives = 41/165 (24%), Gaps = 85/165 (51%)
Query: 106 DECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRF 165
+ C + F+ L H ++HT G ++C
Sbjct: 10 ESCDRRFSQSGSLTRH-IRIHT---------------------GQKPFQCRI-------- 39
Query: 166 QGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTK 225
C F + L TH IR HT
Sbjct: 40 ---------------------CMRNFSRSDHLTTH-IRTHT------------------- 58
Query: 226 IFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK F C C R + E K+H +H +K
Sbjct: 59 -------------GEK-PFACDICGRKFARSDERKRHTKIHLRQK 89
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 84.5 bits (210), Expect = 9e-20
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG--YQCNVCGRVLTDSSNL 1333
S R H+GEKP+ C +C F +K H H + + C C V+ S+L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 1334 KVHMRN-HTGEKKY 1346
VH+R H+
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 73.3 bits (181), Expect = 7e-16
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNL 1992
+ HSGEK Y C+IC+ F + T++ H+ E + F C CD +L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDL 61
Query: 1993 KLHMR-IHTGEKKY 2005
+H+R H+
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 67.2 bits (165), Expect = 1e-13
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 1332 NLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERS--FKCSYCAMTFRCPRTL 1389
+ R H+GEK Y C IC FTQ + H E F C +C L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 1390 TEHKKTH 1396
H +
Sbjct: 62 GVHLRKQ 68
Score = 66.8 bits (164), Expect = 1e-13
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG--YQCNICGRVMSDSTNF 697
S RTH+G++PY C +C F + H H + C C V++ ++
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 698 KDHL-DNHKGEKKYT 711
HL H +
Sbjct: 62 GVHLRKQHSYSGPSS 76
Score = 66.4 bits (163), Expect = 2e-13
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 1991 NLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH---INAQFVCSFCGNTYKNPKSL 2047
+ R H+GEK Y C C A F G++ +H A+F C C L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 2048 DSHIRNSHTNRK 2059
H+R H+
Sbjct: 62 GVHLRKQHSYSG 73
Score = 63.7 bits (156), Expect = 2e-12
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTG--DRPYTCDVCGKSFVAKKHLNRHYNCSHAG 679
Y+C+IC + FT+ ++++H+ + C C K L H H+
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 62.2 bits (152), Expect = 6e-12
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 20/92 (21%)
Query: 565 KRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVT 624
HSGE+ Y C IC F + H +
Sbjct: 4 GSSGRTHSGEKPYECYICHARFTQSGTMKMH-ILQK--------HTENVA---------- 44
Query: 625 KYKCHICDSIFTRYDSLRLHVRT-HTGDRPYT 655
K+ C CD++ R L +H+R H+ P +
Sbjct: 45 KFHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76
Score = 60.2 bits (147), Expect = 3e-11
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 21/94 (22%)
Query: 259 LKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVR 318
H+GEK + C +C F + H H + V
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMH-ILQKH-----------------TENVA 44
Query: 319 KYKCPHPGCPSSFQRFNALQEHM-LSHTGEKPYT 351
K+ CPH C + R + L H+ H+ P +
Sbjct: 45 KFHCPH--CDTVIARKSDLGVHLRKQHSYSGPSS 76
Score = 59.8 bits (146), Expect = 5e-11
Identities = 23/95 (24%), Positives = 29/95 (30%), Gaps = 31/95 (32%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDH 396
+H+GEKPY C C F + + K H
Sbjct: 3 SGSSGRTHSGEKPYECYICHARF----------------------------TQSGTMKMH 34
Query: 397 LDSHRGE--KKYTCETCGTGFAYKSSL-YHHRFTH 428
+ E K+ C C T A KS L H R H
Sbjct: 35 ILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 57.1 bits (139), Expect = 3e-10
Identities = 20/91 (21%), Positives = 29/91 (31%), Gaps = 18/91 (19%)
Query: 1202 LKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETK 1261
H GE+ C +C F Q + H E K
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMH-ILQK----HT------------ENVAK 45
Query: 1262 YKCPLCPSITSRYDSLQQHMR-LHTGEKPFS 1291
+ CP C ++ +R L H+R H+ P S
Sbjct: 46 FHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76
Score = 55.6 bits (135), Expect = 1e-09
Identities = 22/111 (19%), Positives = 32/111 (28%), Gaps = 37/111 (33%)
Query: 1528 SLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSV 1587
S R H+GEK Y C C A FTQ ++ H
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQK----------------------- 38
Query: 1588 TAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1638
+E+ K + C C + + ++ H R H P
Sbjct: 39 -------------HTENVAK-FHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 55.6 bits (135), Expect = 1e-09
Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE--KKYVCQQCGASFTQWASLFYH 1560
R H KPYEC C + ++ H E K+ C C + + L H
Sbjct: 6 SGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64
Score = 55.6 bits (135), Expect = 1e-09
Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE--KKYVCQQCGASFTQWASLFYH 1684
R H KPYEC C + ++ H E K+ C C + + L H
Sbjct: 6 SGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64
Score = 55.2 bits (134), Expect = 2e-09
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 1765 GNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHS--TLRPFLCEFCNAGFKCRKH 1821
G+ + HS K + C IC F + ++ H++ + F C C+ +
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 1822 LLQHYRT-HT--KP 1832
L H R H+ P
Sbjct: 61 LGVHLRKQHSYSGP 74
Score = 54.1 bits (131), Expect = 5e-09
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 1485 YECDICKKQVTNRKNMIDHQRSVH--ELLKPYECDTCGHGLSSKKSLDDHYR-IHTGEKK 1541
YEC IC + T M H E + + C C ++ K L H R H+
Sbjct: 16 YECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74
Query: 1542 Y 1542
Sbjct: 75 S 75
Score = 54.1 bits (131), Expect = 5e-09
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 1609 YECDICKKQVTNRKNMIDHQRSVH--ELLKPYECDTCGHGLSSKKSLDDHYR-IHTGEKK 1665
YEC IC + T M H E + + C C ++ K L H R H+
Sbjct: 16 YECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP 74
Query: 1666 Y 1666
Sbjct: 75 S 75
Score = 51.8 bits (125), Expect = 3e-08
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Query: 1652 SLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQ--KCEE---SFDNCNNL 1706
S R H+GEK Y C C A FTQ ++ H C ++L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 1707 WSHMFIKH 1714
H+ +H
Sbjct: 62 GVHLRKQH 69
Score = 49.4 bits (119), Expect = 2e-07
Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Query: 696 NFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERM--FQCSFCEKKYMSPKTL 753
+ H GEK Y C IC F ++ H E + F C C+ L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 754 KEHEQTHRSGD 764
H + S
Sbjct: 62 GVHLRKQHSYS 72
Score = 49.1 bits (118), Expect = 3e-07
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTM--SCTMCDKSFYQVSRLTEHYKRSH 1238
Y+C C +T+ +K H++ E C CD + S L H ++ H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 48.3 bits (116), Expect = 4e-07
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 392 NFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHI--KDRTYPCTYCERKYQSPKTL 449
+ +H GEK Y C C F ++ H + C +C+ L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 450 KEHL-KVHT 457
HL K H+
Sbjct: 62 GVHLRKQHS 70
Score = 46.7 bits (112), Expect = 2e-06
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGE--RKYTCSICSKCFFIKNRLSEHYRRVH 600
Y+C +C +T K H E K+ C C K+ L H R+ H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 45.6 bits (109), Expect = 4e-06
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 1754 CSYCGNSYANPGNLRTHMVVH---SNKNHICEICGKSFKKKDLLREHM 1798
C C + G ++ H++ + C C +K L H+
Sbjct: 18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Score = 45.2 bits (108), Expect = 5e-06
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 724 SLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIK-HICDTCGSEFNTRKNM 782
S +HS E+ ++C C ++ T+K H + ++ C C + + ++
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 783 LRHT-KVHSTERPY 795
H K HS P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 45.2 bits (108), Expect = 5e-06
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 71 GEIKFQCPDCHTMMKNFA---YLKKHVRDNHSGET---FSCDECSKSFTTKKCLREHYKK 124
GE ++C CH F +K H+ E F C C K L H +K
Sbjct: 12 GEKPYECYICH---ARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67
Query: 125 LHT 127
H+
Sbjct: 68 QHS 70
Score = 45.2 bits (108), Expect = 6e-06
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGE--KHFVCSVCQRGFFMKNRLNEHYKRVH 295
GEK ++C C + +K H+ E F C C K+ L H ++ H
Sbjct: 12 GEK-PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 42.9 bits (102), Expect = 3e-05
Identities = 20/88 (22%), Positives = 27/88 (30%), Gaps = 22/88 (25%)
Query: 90 LKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVE 148
R HSGE + C C FT ++ H E
Sbjct: 3 SGSSGR-THSGEKPYECYICHARFTQSGTMKMH-ILQKH-------------------TE 41
Query: 149 GVVKYKCPECGFMVKRFQGLREHIVSVH 176
V K+ CP C ++ R L H+ H
Sbjct: 42 NVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 42.1 bits (100), Expect = 6e-05
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 24/98 (24%)
Query: 1417 NLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSE 1476
+ S + HS +P++C +C+A+F +K H +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMK------MHI-----------------LQK 38
Query: 1477 SSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1514
+E+ K + C C + + ++ H R H P
Sbjct: 39 HTENVAK-FHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 39.8 bits (94), Expect = 4e-04
Identities = 13/72 (18%), Positives = 22/72 (30%), Gaps = 9/72 (12%)
Query: 1794 LREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT----KPKATNSFSSSKCEESFDN 1849
HS +P+ C C+A F + H F C+
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK-----FHCPHCDTVIAR 57
Query: 1850 CNNLWSHMFIKH 1861
++L H+ +H
Sbjct: 58 KSDLGVHLRKQH 69
Score = 39.0 bits (92), Expect = 8e-04
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 781 NMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ + HS E+PY C C+ F + ++ H
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 40
Score = 34.0 bits (79), Expect = 0.054
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 13/78 (16%)
Query: 1821 HLLQHYRTHT--KPKATNSFSSSKCEESFDNCNNLWSHMFIKHENSD--FVCNLCPPDSK 1876
RTH+ KP + C F + H+ KH + F C C
Sbjct: 2 SSGSSGRTHSGEKP-----YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHC---DT 53
Query: 1877 IVIKYAHLLVRHMKKHHT 1894
++ + + L H++K H+
Sbjct: 54 VIARKSDL-GVHLRKQHS 70
Score = 33.6 bits (78), Expect = 0.066
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 448 TLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRT--HVCELCNANLKTRRS 505
+ + H+ G+ + C C + F + HI +T+ C C+ + +
Sbjct: 2 SSGSSGRTHS-GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 506 LLRHY-TTH 513
L H H
Sbjct: 61 LGVHLRKQH 69
Score = 29.8 bits (68), Expect = 1.8
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 9/65 (13%)
Query: 889 KTHSCIYCEESFSDSKFLDAHVNIEHGKRVHGDDEFECYQCNQCGVELYLGREAFLN-HM 947
K + C C F+ S + H + + C C + R++ L H+
Sbjct: 14 KPYECYICHARFTQSGTMKMH------ILQKHTENVAKFHCPHCDTV--IARKSDLGVHL 65
Query: 948 RHIHS 952
R HS
Sbjct: 66 RKQHS 70
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 83.4 bits (207), Expect = 2e-19
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 1284 HTGEKPFSCQV--CGKSFAAREHLKRHFNNIHMKVG---YQCN--VCGRVLTDSSNLKVH 1336
+G C CG+ F+ R++L H H + + C CG+ +LK H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH--IHQKSFSCPEPACGKSFNFKKHLKEH 59
Query: 1337 MRNHTGEKKYVCEICGKGF 1355
M+ H+ + Y+CE G
Sbjct: 60 MKLHSDTRDYICEFSGPSS 78
Score = 74.9 bits (185), Expect = 2e-16
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 1942 HSGEKDYACHI--CNKVFVRHSTLENHMKAVHEKIRDFQCK--VCDRAFFDVYNLKLHMR 1997
SG C C ++F L +H K H + F C C ++F +LK HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 1998 IHTGEKKYVCETCGASF 2014
+H+ + Y+CE G S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 71.0 bits (175), Expect = 5e-15
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 21/96 (21%)
Query: 266 HTGEKHFVCSV--CQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCP 323
+G C C R F + LN H K+ H+ + + CP
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHH-KKYQHI------------------HQKSFSCP 42
Query: 324 HPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSF 359
P C SF L+EHM H+ + Y CE G S
Sbjct: 43 EPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 64.9 bits (159), Expect = 6e-13
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 648 HTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFG-YQCN--ICGRVMSDSTNFKDHLD 702
+G CD CG+ F +++LN H H + C CG+ + + K+H+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 703 NHKGEKKYTCEICGTGF 719
H + Y CE G
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 64.9 bits (159), Expect = 7e-13
Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 22/95 (23%)
Query: 1209 HRGERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCP- 1265
G M C C + F L H K H + + CP
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI------------------HQKSFSCPE 43
Query: 1266 -LCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSF 1299
C + L++HM+LH+ + + C+ G S
Sbjct: 44 PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 64.1 bits (157), Expect = 1e-12
Identities = 24/103 (23%), Positives = 32/103 (31%), Gaps = 31/103 (30%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHM-LSHTGEKPYTCE--ACGKSFPLKRRLNAHYNKW 372
G C PGC F L H H +K ++C ACGKSF
Sbjct: 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSF------------- 50
Query: 373 HLGKGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGF 415
+ + K+H+ H + Y CE G
Sbjct: 51 ---------------NFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 62.6 bits (153), Expect = 4e-12
Identities = 19/97 (19%), Positives = 29/97 (29%), Gaps = 24/97 (24%)
Query: 571 HSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKC 628
SG C C + F + L+ H + H + C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI--------------------HQKSFSC 41
Query: 629 --HICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSF 663
C F L+ H++ H+ R Y C+ G S
Sbjct: 42 PEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 62.6 bits (153), Expect = 4e-12
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1483 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTG 1538
CD C + +NR+ + H++ H K + C CG + KK L +H ++H+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 1539 EKKYVCQQCGASF 1551
+ Y+C+ G S
Sbjct: 66 TRDYICEFSGPSS 78
Score = 62.6 bits (153), Expect = 4e-12
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1607 KIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTG 1662
CD C + +NR+ + H++ H K + C CG + KK L +H ++H+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 1663 EKKYVCQQCGASF 1675
+ Y+C+ G S
Sbjct: 66 TRDYICEFSGPSS 78
Score = 55.2 bits (134), Expect = 2e-09
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 30/104 (28%)
Query: 704 HKGEKKYTCEI--CGTGFMYKSSLHHHK-FSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
G C+ CG F + L+HHK + H ++ F C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE------------------ 43
Query: 761 RSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSF 804
CG FN +K++ H K+HS R YICE+ S
Sbjct: 44 ---------PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 51.8 bits (125), Expect = 2e-08
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 30/100 (30%)
Query: 1340 HTGEKKYVCEI--CGKGFTQWASHYYHK-FTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+G C+ CG+ F+ +HK + H ++SF C A
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPA---------------- 45
Query: 1397 VLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVC 1436
CG +N +K+L HMK+HS R + C+
Sbjct: 46 -----------CGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Score = 47.9 bits (115), Expect = 7e-07
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 1752 CVCSYCGNSYANPGNLRTHM-VVHSN-KNHICE--ICGKSFKKKDLLREHMIVHSTLRPF 1807
C CG ++N L H H + K+ C CGKSF K L+EHM +HS R +
Sbjct: 10 CDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDY 69
Query: 1808 LCEFCNAGF 1816
+CEF
Sbjct: 70 ICEFSGPSS 78
Score = 47.5 bits (114), Expect = 9e-07
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 1512 KPYECDT--CGHGLSSKKSLDDHYRI-HTGEKKYVCQQ--CGASFTQWASLFYHKFSHS 1565
CD CG S+++ L+ H + H +K + C + CG SF L H HS
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS 64
Score = 46.0 bits (110), Expect = 4e-06
Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 30/100 (30%)
Query: 400 HRGEKKYTC--ETCGTGFAYKSSL-YHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVH 456
G C CG F+ + L +H ++ HI +++ C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE------------------ 43
Query: 457 TSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELC 496
CG F+ +K+L H++ H+ R ++CE
Sbjct: 44 ---------PACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Score = 46.0 bits (110), Expect = 4e-06
Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 1781 CEICGKSFKKKDLLREHM-IVHSTLRPFLCEF--CNAGFKCRKHLLQHYRTHT--KP 1832
CG+ F + L H H + F C C F +KHL +H + H+ +
Sbjct: 12 FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Score = 42.5 bits (101), Expect = 5e-05
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 239 GEKVKFKCPE--CPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGF 281
+K F CPE C +S+ LK+H+ +H+ + ++C
Sbjct: 35 HQK-SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 41.0 bits (97), Expect = 2e-04
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 1738 LERHMKKHHTMQQ--RCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSF 1788
L H K H Q+ C CG S+ +L+ HM +HS+ +++ICE G S
Sbjct: 25 LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 39.8 bits (94), Expect = 5e-04
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 1660 HTGEKKYVC--QQCGASFTQWASLFYHK-FSHSETRNQKCEE-----SFDNCNNLWSHMF 1711
+G C CG F+ L +HK + H ++ C E SF+ +L HM
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 1712 IKHEDSDFVCNLC 1724
+ + D++C
Sbjct: 62 LHSDTRDYICEFS 74
Score = 39.5 bits (93), Expect = 7e-04
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 772 CGSEFNTRKNMLRHTKV-HSTERPYICEY--CNVSFKEKKSLVRHYKIHKG 819
CG F+ R+ + H K H ++ + C C SF KK L H K+H
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Score = 36.4 bits (85), Expect = 0.008
Identities = 28/94 (29%), Positives = 34/94 (36%), Gaps = 27/94 (28%)
Query: 71 GEIKFQC--PDCHTMMKNFAYLKKHVRDNHSGE-TFSCDE--CSKSFTTKKCLREHYKKL 125
G C P C + N YL H + H + +FSC E C KSF KK L+EH KL
Sbjct: 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKL 62
Query: 126 HTIRIRSSREENDMKKKTMVYVEGVVKYKCPECG 159
H+ Y C G
Sbjct: 63 HS---------------------DTRDYICEFSG 75
Score = 36.4 bits (85), Expect = 0.009
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 549 YKCP--LCDRIYTSFSETKRHFEVHSGERKYTCSICSKCF 586
+ CP C + + K H ++HS R Y C
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 36.0 bits (84), Expect = 0.012
Identities = 19/114 (16%), Positives = 33/114 (28%), Gaps = 45/114 (39%)
Query: 1536 HTGEKKYVC--QQCGASFTQWASLFYHK-FSHSETRNQKHVSASSCHQKVPNKSVTAKFK 1592
+G C CG F+ L +HK + H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH---------------------------- 33
Query: 1593 ALFTERSESSESSKKIYECD--ICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1644
+K + C C K +K++ +H + +H + Y C+ G
Sbjct: 34 -----------IHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEFSG 75
Score = 34.8 bits (81), Expect = 0.025
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSF 1224
+ C C K++ LK H+ +H R C S
Sbjct: 39 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 34.4 bits (80), Expect = 0.033
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 33/103 (32%)
Query: 98 HSGET-FSCD--ECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYK 154
SG + CD C + F+ ++ L H K H +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI---------------------HQKSFS 40
Query: 155 CPE--CGFMVKRF---QGLREHIVSVHAQVKDHVCIVCGAAFG 192
CPE CG K F + L+EH+ +H+ +D++C G + G
Sbjct: 41 CPEPACG---KSFNFKKHLKEHM-KLHSDTRDYICEFSGPSSG 79
Score = 32.1 bits (74), Expect = 0.22
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVF 1957
LK H+ +HS +DY C
Sbjct: 56 LKEHMKLHSDTRDYICEFSGPSS 78
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural
genomics consortiu PSI-biology, protein structure
initiative; NMR {Homo sapiens}
Length = 74
Score = 80.6 bits (200), Expect = 2e-18
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSN 1332
H + +KP+ C C SF + +L H +H G Y+CN+CG +N
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVH--TGEKPYRCNICGAQFNRPAN 60
Query: 1333 LKVHMRNHTGEKKY 1346
LK H R H+GEK Y
Sbjct: 61 LKTHTRIHSGEKPY 74
Score = 70.6 bits (174), Expect = 6e-15
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTL 1389
+ H +K Y C+ C F + HK H+ E+ ++C+ C F P L
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61
Query: 1390 TEHKKTH 1396
H + H
Sbjct: 62 KTHTRIH 68
Score = 66.3 bits (163), Expect = 2e-13
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 1499 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1558
+ H + KPY+CD C K +L H +HTGEK Y C CGA F + A+L
Sbjct: 4 HHHHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 1559 YHKFSH 1564
H H
Sbjct: 63 THTRIH 68
Score = 66.3 bits (163), Expect = 2e-13
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 1623 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1682
+ H + KPY+CD C K +L H +HTGEK Y C CGA F + A+L
Sbjct: 4 HHHHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 1683 YHKFSH 1688
H H
Sbjct: 63 THTRIH 68
Score = 65.2 bits (160), Expect = 5e-13
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH--EKIRDFQCKVCDRAFFDVYNL 1992
H + +K Y C C F L +H VH EK ++C +C F NL
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT-VHTGEK--PYRCNICGAQFNRPANL 61
Query: 1993 KLHMRIHTGEKKY 2005
K H RIH+GEK Y
Sbjct: 62 KTHTRIHSGEKPY 74
Score = 60.5 bits (148), Expect = 2e-11
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 28/97 (28%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKD 699
H D+PY CD C SF K +L H V
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHK---------------TV--------- 39
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
H GEK Y C ICG F ++L H HS E+
Sbjct: 40 ----HTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 59.8 bits (146), Expect = 3e-11
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKD 395
H +KPY C+ C SF K L +H H G K YRC+ICG+ + AN K
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 396 HLDSHRGEKKY 406
H H GEK Y
Sbjct: 64 HTRIHSGEKPY 74
Score = 57.5 bits (140), Expect = 2e-10
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K Y+CD C+ + N+ H+ VH KPY C+ CG + +L H RIH+GEK Y
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 57.5 bits (140), Expect = 2e-10
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
K Y+CD C+ + N+ H+ VH KPY C+ CG + +L H RIH+GEK Y
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 56.7 bits (138), Expect = 4e-10
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
YKC C + F +L H HTG++PY C++CG F +L H
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Score = 52.1 bits (126), Expect = 2e-08
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 1766 NLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQ 1824
+ H + + K + C+ C SF+ K L H VH+ +P+ C C A F +L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 1825 HYRTHT--KP 1832
H R H+ KP
Sbjct: 64 HTRIHSGEKP 73
Score = 51.3 bits (124), Expect = 3e-08
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 19/89 (21%)
Query: 1202 LKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETK 1261
H + ++ C C SF L H K H GE
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVH------------------TGEKP 45
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPF 1290
Y+C +C + +R +L+ H R+H+GEKP+
Sbjct: 46 YRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 50.9 bits (123), Expect = 6e-08
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 21/93 (22%)
Query: 562 SETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVD 621
H + ++ Y C C F K L+ H + VH
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHT-------------------- 41
Query: 622 GVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPY 654
G Y+C+IC + F R +L+ H R H+G++PY
Sbjct: 42 GEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 49.8 bits (120), Expect = 1e-07
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
YKC C +SF+ L H HTGEKPY C CG F L H
Sbjct: 18 YKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Score = 49.0 bits (118), Expect = 2e-07
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 700 HLDNHK----GEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKE 755
H +H +K Y C+ C F YK +L HK H+ E+ ++C+ C ++ P LK
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 756 HEQTH 760
H + H
Sbjct: 64 HTRIH 68
Score = 49.0 bits (118), Expect = 2e-07
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 1991 NLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDS 2049
+ H + +K Y C+ C ASF + G+L H H + + C+ CG + P +L +
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 2050 HIRNSHTNRK 2059
H R H+ K
Sbjct: 64 HTR-IHSGEK 72
Score = 48.6 bits (117), Expect = 3e-07
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 22/94 (23%)
Query: 257 SELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDG 316
H + +K + C CQ F K L H K VH G
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVH-------------------TG 42
Query: 317 VRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPY 350
+ Y+C C + F R L+ H H+GEKPY
Sbjct: 43 EKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY 74
Score = 47.8 bits (115), Expect = 6e-07
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 753 LKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVR 812
H D + CD C + F + N+ H VH+ E+PY C C F +L
Sbjct: 5 HHHHSHMT-HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 813 HYKIHKG 819
H +IH G
Sbjct: 64 HTRIHSG 70
Score = 45.9 bits (110), Expect = 3e-06
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHT 457
+K Y C+ C F YK +L H+ H ++ Y C C ++ P LK H ++H+
Sbjct: 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS 69
Score = 45.9 bits (110), Expect = 3e-06
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
YKC C ++ L H VH GE+ C +C F + + L H R H
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIH 68
Score = 43.6 bits (104), Expect = 2e-05
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+K +KC C S+ L H VHTGEK + C++C F L H R+H
Sbjct: 14 SDK-PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIH 68
Score = 39.0 bits (92), Expect = 8e-04
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVH 1801
C C S+ GNL +H VH+ K + C ICG F + L+ H +H
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68
Score = 39.0 bits (92), Expect = 9e-04
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
YKC C + H VH+GE+ Y C+IC F L H R+H
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIH 68
Score = 34.0 bits (79), Expect = 0.053
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 1389 LTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLK 1447
H SD + C+ C + + NL SH +H+ +P++C++C A+F LK
Sbjct: 5 HHHHSHMTH-SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Score = 32.0 bits (74), Expect = 0.25
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ ++C C + L H H+GE + C+ C F L+ H ++H+
Sbjct: 14 SDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPANLKTH-TRIHS 69
Score = 31.3 bits (72), Expect = 0.50
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK ++C C + + LK H +H+GEK
Sbjct: 42 GEK-PYRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 30.1 bits (69), Expect = 1.1
Identities = 17/72 (23%), Positives = 22/72 (30%), Gaps = 24/72 (33%)
Query: 89 YLKKHVRDNHSGE-TFSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYV 147
+ H + + CD C SF K L H K +HT
Sbjct: 4 HHHHHSH-MTHSDKPYKCDRCQASFRYKGNLASH-KTVHT-------------------- 41
Query: 148 EGVVKYKCPECG 159
G Y+C CG
Sbjct: 42 -GEKPYRCNICG 52
Score = 29.0 bits (66), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
Y+C+ C + R LK H +H GE+
Sbjct: 46 YRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 28.2 bits (64), Expect = 5.0
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
YKC C + L H +VH K + C +CGA F LKTH R H+
Sbjct: 18 YKCDRCQASFRYKGNLASHK-TVHTGEKPYRCNICGAQFNRPANLKTHT-RIHS 69
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 80.5 bits (200), Expect = 2e-18
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ C +CG+ SS L H+ H+ + Y C+ CGK F Q + H F H+ E+ KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 1378 YCAMTFRCPRTLTEHKKTH 1396
C F L H + H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 79.0 bits (196), Expect = 7e-18
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 28/107 (26%)
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCN 1321
+ C +C R +L H+ +H+ +P+ CQ CGK F
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF---------------------- 39
Query: 1322 VCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTH 1368
S++K H HTGEK + C++CGK F+Q ++ H H
Sbjct: 40 ------HQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 74.8 bits (185), Expect = 3e-16
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 1485 YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
++C IC K + H +H +PY C CG K + H IHTGEK + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 1545 QQCGASFTQWASLFYHKFSH 1564
Q CG +F+Q ++L H H
Sbjct: 61 QVCGKAFSQSSNLITHSRKH 80
Score = 74.8 bits (185), Expect = 3e-16
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 1609 YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
++C IC K + H +H +PY C CG K + H IHTGEK + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 1669 QQCGASFTQWASLFYHKFSH 1688
Q CG +F+Q ++L H H
Sbjct: 61 QVCGKAFSQSSNLITHSRKH 80
Score = 67.1 bits (165), Expect = 1e-13
Identities = 30/107 (28%), Positives = 41/107 (38%), Gaps = 28/107 (26%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCN 685
+ C IC F R +L H+ H+ RPY C CGK F K + +H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT------------ 49
Query: 686 ICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSH 732
+ H GEK + C++CG F S+L H H
Sbjct: 50 ---FI-------------HTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 60.5 bits (148), Expect = 3e-11
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 30/109 (27%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYR 379
+ C C SF+R + L H+L H+ +PY C+ CGK F
Sbjct: 2 FDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF-------------------- 39
Query: 380 CHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
++ K H H GEK + C+ CG F+ S+L H H
Sbjct: 40 --------HQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 60.5 bits (148), Expect = 3e-11
Identities = 38/156 (24%), Positives = 49/156 (31%), Gaps = 75/156 (48%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVN 1246
+ C C K++ R L HL++H R C C K F+Q S +
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMK--------------- 46
Query: 1247 QLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLK 1306
+H +HTGEKP CQVCGK+F
Sbjct: 47 --------------------------------KHTFIHTGEKPHKCQVCGKAF------- 67
Query: 1307 RHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTG 1342
+ SSNL H R HTG
Sbjct: 68 ---------------------SQSSNLITHSRKHTG 82
Score = 58.6 bits (143), Expect = 1e-10
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 1920 FKCPDCPTILQTFR---GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRD 1976
F C C ++F+ L HL IHS + Y C C K F + S ++ H +H +
Sbjct: 2 FDCKICG---KSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKP 57
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTG 2001
+C+VC +AF NL H R HTG
Sbjct: 58 HKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 55.1 bits (134), Expect = 2e-09
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ C ICG+ S+ HL H + Y C+ CG F KS + H F H+ E+ +C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 742 FCEKKYMSPKTLKEHEQTH 760
C K + L H + H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 54.7 bits (133), Expect = 2e-09
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCS 2035
F CK+C ++F L H+ IH+ + Y C+ CG F + H + H + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 2036 FCGNTYKNPKSLDSHIRNSHT 2056
CG + +L +H R HT
Sbjct: 62 VCGKAFSQSSNLITHSR-KHT 81
Score = 54.4 bits (132), Expect = 3e-09
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFC 1812
C CG S+ L TH+++HS+ + + C+ CGK F +K +++H +H+ +P C+ C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 1813 NAGFKCRKHLLQHYRTHT 1830
F +L+ H R HT
Sbjct: 64 GKAFSQSSNLITHSRKHT 81
Score = 52.8 bits (128), Expect = 1e-08
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 29/110 (26%)
Query: 710 YTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHIC 769
+ C+ICG F S+L H HS R + C +C K+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKR----------------------- 38
Query: 770 DTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
F+ + +M +HT +H+ E+P+ C+ C +F + +L+ H + H G
Sbjct: 39 ------FHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 51.3 bits (124), Expect = 5e-08
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 378 YRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
+ C ICG + ++ HL H + Y C+ CG F KS + H F H ++ + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 438 YCERKYQSPKTLKEHLKVHT 457
C + + L H + HT
Sbjct: 62 VCGKAFSQSSNLITHSRKHT 81
Score = 50.9 bits (123), Expect = 6e-08
Identities = 27/125 (21%), Positives = 40/125 (32%), Gaps = 50/125 (40%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRD 303
F C C +S+ S L HL +H+ + + C C + F K+ + +H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH------------- 48
Query: 304 HDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKR 363
HTGEKP+ C+ CGK+F
Sbjct: 49 ----------------------------TFI---------HTGEKPHKCQVCGKAFSQSS 71
Query: 364 RLNAH 368
L H
Sbjct: 72 NLITH 76
Score = 49.7 bits (120), Expect = 1e-07
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSF 1838
C+ICGKSFK+ L H+++HS RP+ C++C F + + +H HT KP
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP------ 57
Query: 1839 SSSKCEE---SFDNCNNLWSHMFI 1859
KC+ +F +NL +H
Sbjct: 58 --HKCQVCGKAFSQSSNLITHSRK 79
Score = 49.3 bits (119), Expect = 2e-07
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 40/121 (33%)
Query: 1542 YVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSES 1601
+ C+ CG SF + ++L H HS+T
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDT---------------------------------- 27
Query: 1602 SESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHT 1661
+ Y C C K+ + +M H +H KP++C CG S +L H R HT
Sbjct: 28 -----RPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81
Query: 1662 G 1662
G
Sbjct: 82 G 82
Score = 48.2 bits (116), Expect = 5e-07
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTG 1538
+ Y C C K+ + +M H +H KP++C CG S +L H R HTG
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 48.2 bits (116), Expect = 5e-07
Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 49/124 (39%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMAR 608
+ C +C + + S H +HS R Y C C K
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKR----------------------- 38
Query: 609 TNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKH 668
F + ++ H HTG++P+ C VCGK+F +
Sbjct: 39 --------------------------FHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSN 72
Query: 669 LNRH 672
L H
Sbjct: 73 LITH 76
Score = 43.9 bits (105), Expect = 2e-05
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1373 SFKCSYCAMTFRCPRTLTEHKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPH 1431
SF C C +F+ TL+ H H SD + + C CG ++ + ++ H IH+ +PH
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLLIH--SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH 58
Query: 1432 QCDVC 1436
+C VC
Sbjct: 59 KCQVC 63
Score = 36.6 bits (86), Expect = 0.008
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
Y C C + + S+ K+H +H+GE+ + C +C K F + L H R H
Sbjct: 30 YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH-SRKH 80
Score = 34.3 bits (80), Expect = 0.052
Identities = 25/108 (23%), Positives = 37/108 (34%), Gaps = 29/108 (26%)
Query: 406 YTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTSGDVRHIC 465
+ C+ CG F S+L H H R YPC YC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYC-------------------------- 35
Query: 466 QTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTH 513
G FH + ++ H H ++ H C++C +L+ H H
Sbjct: 36 ---GKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 30.9 bits (71), Expect = 0.78
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 24/105 (22%)
Query: 102 TFSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFM 161
+F C C KSF L H +H+ Y C CG
Sbjct: 1 SFDCKICGKSFKRSSTLSTH-LLIHS---------------------DTRPYPCQYCGKR 38
Query: 162 VKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
+ +++H +H K H C VCG AF + L TH R+HT
Sbjct: 39 FHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHS-RKHT 81
Score = 30.9 bits (71), Expect = 0.82
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 1666 YVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFI 1712
+ C+ CG SF + ++L H HS+TR C+ F +++ H FI
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI 51
Score = 29.3 bits (67), Expect = 2.4
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
+ C C + +KKH H+GE C C K+F+ L H + HT
Sbjct: 26 DTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITH-SRKHT 81
Score = 28.9 bits (66), Expect = 3.3
Identities = 28/116 (24%), Positives = 38/116 (32%), Gaps = 35/116 (30%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQ 212
+ C CG KR L H+ +H+ + + C CG F +K H HT
Sbjct: 2 FDCKICGKSFKRSSTLSTHL-LIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHT------ 53
Query: 213 ANHDNEDKLDVTKIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTG 268
GEK KC C +++ S L H HTG
Sbjct: 54 --------------------------GEK-PHKCQVCGKAFSQSSNLITHSRKHTG 82
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 76.0 bits (188), Expect = 8e-17
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 1277 LQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNL 1333
+H+GEKP+ C CGK+F+ L +H +H G Y+C CG+ + +S L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHT--GEKPYKCLECGKAFSQNSGL 58
Query: 1334 KVHMRNHTGEKKY 1346
H R HT
Sbjct: 59 INHQRIHTSGPSS 71
Score = 66.7 bits (164), Expect = 1e-13
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1501 IDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYH 1560
+H KPY C CG S L H R+HTGEK Y C +CG +F+Q + L H
Sbjct: 3 SGSSG-IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1561 KFSHS 1565
+ H+
Sbjct: 62 QRIHT 66
Score = 66.7 bits (164), Expect = 1e-13
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1625 IDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYH 1684
+H KPY C CG S L H R+HTGEK Y C +CG +F+Q + L H
Sbjct: 3 SGSSG-IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1685 KFSHS 1689
+ H+
Sbjct: 62 QRIHT 66
Score = 66.0 bits (162), Expect = 2e-13
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 1934 GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLK 1993
G IHSGEK Y C C K F R S L H + VH + ++C C +AF L
Sbjct: 1 GSSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLI 59
Query: 1994 LHMRIHTGEKKY 2005
H RIHT
Sbjct: 60 NHQRIHTSGPSS 71
Score = 59.4 bits (145), Expect = 5e-11
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 1333 LKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEH 1392
H+GEK Y C CGK F++ + H+ H+ E+ +KC C F L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1393 KKTH 1396
++ H
Sbjct: 62 QRIH 65
Score = 58.3 bits (142), Expect = 1e-10
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
K Y C C K + ++ HQR VH KPY+C CG S L +H RIHT
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 58.3 bits (142), Expect = 1e-10
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
K Y C C K + ++ HQR VH KPY+C CG S L +H RIHT
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 57.9 bits (141), Expect = 2e-10
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 641 LRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKD 699
H+G++PY C CGK+F L +H H G Y+C CG+ S ++ +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 700 HLDNHKGEKKY 710
H H
Sbjct: 61 HQRIHTSGPSS 71
Score = 56.3 bits (137), Expect = 6e-10
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKD 395
H+GEKPY C CGK+F L H + H G K Y+C CG S + +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 396 HLDSHRGEKKY 406
H H
Sbjct: 61 HQRIHTSGPSS 71
Score = 54.8 bits (133), Expect = 2e-09
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
Y C C F+R L H R HTG++PY C CGK+F L H
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Score = 49.0 bits (118), Expect = 2e-07
Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 19/89 (21%)
Query: 1202 LKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETK 1261
+H GE+ C C K+F + S L +H +R H GE
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHT------------------GEKP 42
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPF 1290
YKC C S+ L H R+HT
Sbjct: 43 YKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 48.2 bits (116), Expect = 4e-07
Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 21/89 (23%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK 625
+HSGE+ Y C C K F + L +H +RVH G
Sbjct: 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHT--------------------GEKP 42
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPY 654
YKC C F++ L H R HT
Sbjct: 43 YKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 47.8 bits (115), Expect = 6e-07
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 1653 LDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSH 1709
IH+GEK Y C +CG +F++ + L H+ H+ + KC E +F + L +H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Score = 47.8 bits (115), Expect = 6e-07
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 753 LKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVR 812
H SG+ + C CG F+ +++H +VH+ E+PY C C +F + L+
Sbjct: 2 SSGSSGIH-SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 813 HYKIHKG 819
H +IH
Sbjct: 61 HQRIHTS 67
Score = 46.7 bits (112), Expect = 2e-06
Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 40/110 (36%)
Query: 1529 LDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVT 1588
IH+GEK Y C +CG +F++ + L H+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH------------------------ 37
Query: 1589 AKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1638
+ +K Y+C C K + +I+HQR +H
Sbjct: 38 ---------------TGEKPYKCLECGKAFSQNSGLINHQR-IHTSGPSS 71
Score = 46.3 bits (111), Expect = 2e-06
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 1767 LRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQH 1825
+HS K + C CGK+F + +L +H VH+ +P+ C C F L+ H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 1826 YRTHT--KP 1832
R HT
Sbjct: 62 QRIHTSGPS 70
Score = 45.5 bits (109), Expect = 4e-06
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
Y C C +F R + L +H HTGEKPY C CGK+F L H
Sbjct: 15 YGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Score = 44.0 bits (105), Expect = 1e-05
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
Y C +C K ++R L H VH GE+ C C K+F Q S L H +R H
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIH 65
Score = 44.0 bits (105), Expect = 1e-05
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
H GEK Y C CG F S L H+ H+ E+ ++C C K + L H++ H
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 43.6 bits (104), Expect = 2e-05
Identities = 22/92 (23%), Positives = 33/92 (35%), Gaps = 22/92 (23%)
Query: 259 LKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVR 318
+H+GEK + C C + F + L +H +RVH G +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVH-------------------TGEK 41
Query: 319 KYKCPHPGCPSSFQRFNALQEHMLSHTGEKPY 350
YKC C +F + + L H HT
Sbjct: 42 PYKCLE--CGKAFSQNSGLINHQRIHTSGPSS 71
Score = 43.2 bits (103), Expect = 2e-05
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHT 457
H GEK Y C CG F+ S L H+ H ++ Y C C + + L H ++HT
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66
Score = 42.8 bits (102), Expect = 3e-05
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 1992 LKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSH 2050
IH+GEK Y C CG +F L H H + + C CG + L +H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 2051 IRNSHTNRK 2059
R HT+
Sbjct: 62 QR-IHTSGP 69
Score = 42.5 bits (101), Expect = 4e-05
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
GEK + C EC +++ S L +H VHTGEK + C C + F + L H +R+H
Sbjct: 11 GEK-PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIH 65
Score = 37.4 bits (88), Expect = 0.002
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 725 LHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLR 784
HS E+ + C C K + L +H++ H +G+ + C CG F+ ++
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH-TGEKPYKCLECGKAFSQNSGLIN 60
Query: 785 HTKVHSTERPY 795
H ++H++
Sbjct: 61 HQRIHTSGPSS 71
Score = 37.1 bits (87), Expect = 0.004
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
Y C C + ++ S +H VH+GE+ Y C C K F + L H +R+H
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIH 65
Score = 32.1 bits (74), Expect = 0.23
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPF 1807
C CG +++ L H VH+ K + C CGK+F + L H +H++
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 31.7 bits (73), Expect = 0.29
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 1389 LTEHKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYL 1446
+ H S K + C CG ++ L+ H ++H+ +P++C C F L
Sbjct: 2 SSGSSGIH--SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58
Score = 31.3 bits (72), Expect = 0.41
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHF 272
GEK +KC EC +++ S L H +HT
Sbjct: 39 GEK-PYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 30.9 bits (71), Expect = 0.51
Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 449 LKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLR 508
+H+ G+ + C CG F L+ H R H ++ + C C L+
Sbjct: 2 SSGSSGIHS-GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 509 HYTTH 513
H H
Sbjct: 61 HQRIH 65
Score = 30.5 bits (70), Expect = 0.82
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
GE + C +C + L +H R H+GE + C EC K+F+ L H +++HT
Sbjct: 11 GEKPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINH-QRIHT 66
Score = 29.4 bits (67), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 23/63 (36%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCP 156
HSGE + C EC K+F+ L +H +++HT G YKC
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQH-QRVHT---------------------GEKPYKCL 46
Query: 157 ECG 159
ECG
Sbjct: 47 ECG 49
Score = 27.4 bits (62), Expect = 9.3
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
YKC +C K +++ L H +H
Sbjct: 43 YKCLECGKAFSQNSGLINHQRIHTSGP 69
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain
containing protein 16, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 74.0 bits (183), Expect = 3e-16
Identities = 26/100 (26%), Positives = 34/100 (34%), Gaps = 28/100 (28%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKV 1335
S + + + C CGKSF + SS+L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSF----------------------------SHSSDLSK 36
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFK 1375
H R HTGEK Y C+ CGK F Q + H H+
Sbjct: 37 HRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76
Score = 68.2 bits (168), Expect = 4e-14
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTL 1389
S + ++Y C+ CGK F+ + H+ TH+ E+ +KC C F L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 1390 TEHKKTH 1396
H + H
Sbjct: 63 IGHHRVH 69
Score = 66.7 bits (164), Expect = 1e-13
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 1499 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1558
+ + + Y+CD CG S L H R HTGEK Y C +CG +F Q + L
Sbjct: 5 SSGRSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 1559 YHKFSH 1564
H H
Sbjct: 64 GHHRVH 69
Score = 66.7 bits (164), Expect = 1e-13
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 1623 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1682
+ + + Y+CD CG S L H R HTGEK Y C +CG +F Q + L
Sbjct: 5 SSGRSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 1683 YHKFSH 1688
H H
Sbjct: 64 GHHRVH 69
Score = 60.5 bits (148), Expect = 2e-11
Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKL 1994
+ Y C C K F S L H + H + ++C C +AF +L
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIG 64
Query: 1995 HMRIHTGEKKY 2005
H R+HTG
Sbjct: 65 HHRVHTGSGPS 75
Score = 59.8 bits (146), Expect = 4e-11
Identities = 26/97 (26%), Positives = 32/97 (32%), Gaps = 28/97 (28%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKD 699
S R Y CD CGKSF L++H R
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHR---------------RT--------- 40
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
H GEK Y C+ CG F+ +S L H H+
Sbjct: 41 ----HTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73
Score = 58.6 bits (143), Expect = 9e-11
Identities = 26/89 (29%), Positives = 31/89 (34%), Gaps = 28/89 (31%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG 1317
+YKC C S L +H R HTGEKP+ C CGK+F
Sbjct: 15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF------------------ 56
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKY 1346
S+L H R HTG
Sbjct: 57 ----------IQRSHLIGHHRVHTGSGPS 75
Score = 57.1 bits (139), Expect = 4e-10
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
YKC C F+ L H RTHTG++PY CD CGK+F+ + HL H
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Score = 56.7 bits (138), Expect = 4e-10
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
+ Y+CD C K ++ ++ H+R H KPY+CD CG + L H+R+HTG
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 56.7 bits (138), Expect = 4e-10
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
+ Y+CD C K ++ ++ H+R H KPY+CD CG + L H+R+HTG
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 54.4 bits (132), Expect = 3e-09
Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 28/92 (30%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDH 396
+ Y C+ CGKSF S++++ H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSF----------------------------SHSSDLSKH 37
Query: 397 LDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
+H GEK Y C+ CG F +S L H H
Sbjct: 38 RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69
Score = 50.1 bits (121), Expect = 9e-08
Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 19/89 (21%)
Query: 1202 LKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETK 1261
R R C C KSF S L++H +R+H GE
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTH------------------TGEKP 46
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPF 1290
YKC C + L H R+HTG P
Sbjct: 47 YKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 49.0 bits (118), Expect = 2e-07
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 1765 GNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLL 1823
G+ + + C+ CGKSF L +H H+ +P+ C+ C F R HL+
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 1824 QHYRTHT--KP 1832
H+R HT P
Sbjct: 64 GHHRVHTGSGP 74
Score = 47.1 bits (113), Expect = 1e-06
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 752 TLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLV 811
+ E ++ CD CG F+ ++ +H + H+ E+PY C+ C +F ++ L+
Sbjct: 5 SSGRSEWQQ-RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 812 RHYKIHKG 819
H+++H G
Sbjct: 64 GHHRVHTG 71
Score = 47.1 bits (113), Expect = 1e-06
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 21/89 (23%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK 625
R R+Y C C K F + LS+H RR H G
Sbjct: 8 RSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHT--------------------GEKP 46
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPY 654
YKC C F + L H R HTG P
Sbjct: 47 YKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 46.3 bits (111), Expect = 2e-06
Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 22/97 (22%)
Query: 254 GNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETN 313
G+ + + + C C + F + L++H +R H
Sbjct: 1 GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTH------------------ 41
Query: 314 VDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPY 350
G + YKC C +F + + L H HTG P
Sbjct: 42 -TGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 45.9 bits (110), Expect = 3e-06
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
YKC C SF + L +H +HTGEKPY C+ CGK+F + L H
Sbjct: 19 YKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Score = 44.7 bits (107), Expect = 8e-06
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 694 STNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTL 753
S + + ++Y C+ CG F + S L H+ +H+ E+ ++C C K ++ L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 754 KEHEQTH 760
H + H
Sbjct: 63 IGHHRVH 69
Score = 43.2 bits (103), Expect = 3e-05
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHT 457
R ++Y C+ CG F++ S L HR TH ++ Y C C + + L H +VHT
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70
Score = 42.8 bits (102), Expect = 4e-05
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
YKC +C K+++ +L H H GE+ C C K+F Q S L H R H
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVH 69
Score = 40.9 bits (97), Expect = 2e-04
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ ++KC EC +S+ + S+L KH HTGEK + C C + F ++ L H RVH
Sbjct: 15 ERR-RYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVH 69
Score = 35.5 bits (83), Expect = 0.016
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 416 AYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTR 475
S + + R Y C C + + L +H + HT G+ + C CG F R
Sbjct: 1 GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT-GEKPYKCDECGKAFIQR 59
Query: 476 KNLLTHIRTH 485
+L+ H R H
Sbjct: 60 SHLIGHHRVH 69
Score = 33.6 bits (78), Expect = 0.082
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
YKC C + ++ S+ +H H+GE+ Y C C K F ++ L H RVH
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVH 69
Score = 31.6 bits (73), Expect = 0.39
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 1738 LERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLRE 1796
R + ++R C CG S+++ +L H H+ K + C+ CGK+F ++ L
Sbjct: 6 SGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 1797 HMIVH 1801
H VH
Sbjct: 65 HHRVH 69
Score = 30.9 bits (71), Expect = 0.71
Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 1388 TLTEHKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVC 1436
+ + + + + C+ CG ++ +L H + H+ +P++CD C
Sbjct: 5 SSGRSEWQQ--RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDEC 52
Score = 30.5 bits (70), Expect = 0.79
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK +KC EC +++ S L H VHTG
Sbjct: 43 GEK-PYKCDECGKAFIQRSHLIGHHRVHTGSG 73
Score = 30.5 bits (70), Expect = 0.90
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 448 TLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLL 507
+ R+ C CG F +L H RTH ++ + C+ C R L+
Sbjct: 5 SSGRSEWQQR-ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 508 RHYTTH 513
H+ H
Sbjct: 64 GHHRVH 69
Score = 30.5 bits (70), Expect = 1.0
Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 24/71 (33%)
Query: 90 LKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVE 148
+ + CDEC KSF+ L +H ++ HT
Sbjct: 6 SGRSEW-QQRERRRYKCDECGKSFSHSSDLSKH-RRTHT--------------------- 42
Query: 149 GVVKYKCPECG 159
G YKC ECG
Sbjct: 43 GEKPYKCDECG 53
Score = 28.9 bits (66), Expect = 3.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+++C +C + + L KH R H+GE + CDEC K+F + L H ++HT
Sbjct: 15 ERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSHLIGH-HRVHT 70
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 72.9 bits (180), Expect = 1e-15
Identities = 27/114 (23%), Positives = 38/114 (33%), Gaps = 30/114 (26%)
Query: 1257 EGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQV--CGKSFAAREHLKRHFNNIHM 1314
C ++ L+ H+R HTGEKP+ C CG FA
Sbjct: 3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFA-------------- 48
Query: 1315 KVGYQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTH 1368
S L H R HTG + + C+ C + F++ H H
Sbjct: 49 --------------RSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 70.6 bits (174), Expect = 7e-15
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVC--EICGKGFTQWASHYYHKFTHSEERSFK 1375
CG+ T SS+LK H+R HTGEK Y C + CG F + H H+ R F+
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 1376 CSYCAMTFRCPRTLTEHKKTH 1396
C C F L H K H
Sbjct: 68 CQKCDRAFSRSDHLALHMKRH 88
Score = 68.3 bits (168), Expect = 5e-14
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 21/102 (20%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKC--PL 1266
T C K++ + S L H R+H GE Y C
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAH-LRTHT------------------GEKPYHCDWDG 42
Query: 1267 CPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
C +R D L +H R HTG +PF CQ C ++F+ +HL H
Sbjct: 43 CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH 84
Score = 65.2 bits (160), Expect = 8e-13
Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKV--CDRAFFDVYNLKLHMRIH 1999
+ C K + + S L+ H++ H + + C C F L H R H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 2000 TGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG + + C+ C +F L +H H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 62.5 bits (153), Expect = 6e-12
Identities = 29/110 (26%), Positives = 38/110 (34%), Gaps = 30/110 (27%)
Query: 625 KYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFGY 682
C +T+ L+ H+RTHTG++PY CD CG F L RHY
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY--------- 57
Query: 683 QCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSH 732
R H G + + C+ C F L H H
Sbjct: 58 ------RK-------------HTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.9 bits (146), Expect = 5e-11
Identities = 27/104 (25%), Positives = 34/104 (32%), Gaps = 23/104 (22%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHI 630
+ + C K + + L H R H G Y C
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAH-LRTHT--------------------GEKPYHCDW 40
Query: 631 --CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
C F R D L H R HTG RP+ C C ++F HL H
Sbjct: 41 DGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH 84
Score = 59.5 bits (145), Expect = 7e-11
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 30/113 (26%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC--EACGKSFPLKRRLNAHYNKWHLG 375
+ C + GC ++ + + L+ H+ +HTGEKPY C + CG F L HY K
Sbjct: 4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK---- 59
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
H G + + C+ C F+ L H H
Sbjct: 60 ------------------------HTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.5 bits (145), Expect = 7e-11
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 1746 HTMQQRCVCSYCGNSYANPGNLRTHMVVHSN-KNHIC--EICGKSFKKKDLLREHMIVHS 1802
T C + CG +Y +L+ H+ H+ K + C + CG F + D L H H+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 1803 TLRPFLCEFCNAGFKCRKHLLQHYRTH 1829
RPF C+ C+ F HL H + H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.1 bits (144), Expect = 1e-10
Identities = 29/130 (22%), Positives = 37/130 (28%), Gaps = 49/130 (37%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMN 298
C ++Y S LK HL HTGEK
Sbjct: 4 ATHT-CDYAGCGKTYTKSSHLKAHLRTHTGEK---------------------------- 34
Query: 299 FTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKS 358
Y C GC F R + L H HTG +P+ C+ C ++
Sbjct: 35 --------------------PYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA 74
Query: 359 FPLKRRLNAH 368
F L H
Sbjct: 75 FSRSDHLALH 84
Score = 57.5 bits (140), Expect = 4e-10
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 1482 KKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTGE 1539
+ C K T ++ H R H KPY CD CG + L HYR HTG
Sbjct: 5 THTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63
Query: 1540 KKYVCQQCGASFTQWASLFYHKFSH 1564
+ + CQ+C +F++ L H H
Sbjct: 64 RPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 57.5 bits (140), Expect = 4e-10
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 1606 KKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTGE 1663
+ C K T ++ H R H KPY CD CG + L HYR HTG
Sbjct: 5 THTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63
Query: 1664 KKYVCQQCGASFTQWASLFYHKFSH 1688
+ + CQ+C +F++ L H H
Sbjct: 64 RPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 56.4 bits (137), Expect = 8e-10
Identities = 31/67 (46%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1935 LKAHLDIHSGEKDYACHI--CNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNL 1992
LKAHL H+GEK Y C C F R L H + H R FQC+ CDRAF +L
Sbjct: 23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQKCDRAFSRSDHL 81
Query: 1993 KLHMRIH 1999
LHM+ H
Sbjct: 82 ALHMKRH 88
Score = 54.5 bits (132), Expect = 4e-09
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTY--CERKYQSPKTLKEHLKVHT 457
CG + S L H TH ++ Y C + C K+ L H + HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 458 SGDVRHICQTCGSEFHTRKNLLTHIRTH 485
G CQ C F +L H++ H
Sbjct: 62 -GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 53.7 bits (130), Expect = 9e-09
Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 27/114 (23%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSG 763
CG + S L H +H+ E+ + C +
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG------------------- 42
Query: 764 DIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIH 817
CG +F + RH + H+ RP+ C+ C+ +F L H K H
Sbjct: 43 --------CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 51.8 bits (125), Expect = 4e-08
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 1340 HTGEKKYVCEICGKGFTQWASH-YYHKFTHSEERSFKCSY--CAMTFRCPRTLTEHKKTH 1396
T CGK +T+ +SH H TH+ E+ + C + C F LT H + H
Sbjct: 2 RTATHTCDYAGCGKTYTK-SSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 1397 VLSDVK-HVCNTCGNEYNTRKNLLSHMKIH 1425
+ + C C ++ +L HMK H
Sbjct: 61 --TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 51.8 bits (125), Expect = 4e-08
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 23/103 (22%)
Query: 548 KYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMRVS 605
C + YT S K H H+GE+ Y C C F + L+ HYR+ H
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-H----- 60
Query: 606 MARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTH 648
G ++C CD F+R D L LH++ H
Sbjct: 61 ---------------TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 47.9 bits (115), Expect = 8e-07
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 1632 HELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ--QCGASFTQWASLFYHKFSHS 1689
+ CG + L H R HTGEK Y C CG F + L H H+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 1690 ETRNQKCEE 1698
R +C++
Sbjct: 62 GHRPFQCQK 70
Score = 46.0 bits (110), Expect = 4e-06
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 1508 HELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ--QCGASFTQWASLFYHKFSHS 1565
+ CG + L H R HTGEK Y C CG F + L H H+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Score = 45.6 bits (109), Expect = 5e-06
Identities = 23/103 (22%), Positives = 30/103 (29%), Gaps = 30/103 (29%)
Query: 1971 HEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVC--ETCGASFVHWGSLNIHNYSHI 2028
C + + +LK H+R HTGEK Y C + CG F L H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRH----- 56
Query: 2029 NAQFVCSFCGNTYKNPKSLDSHIRNSHTNRKKSICDDCTKAMS 2071
HT + C C +A S
Sbjct: 57 -----------------------YRKHTGHRPFQCQKCDRAFS 76
Score = 43.3 bits (103), Expect = 4e-05
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKR 1236
Y C C + R EL H H G R C CD++F + L H KR
Sbjct: 36 YHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87
Score = 42.1 bits (100), Expect = 8e-05
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHH 296
GEK + C C + EL +H HTG + F C C R F + L H KR H
Sbjct: 32 GEK-PYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR--H 88
Query: 297 M 297
Sbjct: 89 F 89
Score = 36.0 bits (84), Expect = 0.015
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYIC--EYCNVSFKEKKSLVRHYKIHKGV 820
CG + ++ H + H+ E+PY C + C F L RHY+ H G
Sbjct: 10 YAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH 63
Score = 31.7 bits (73), Expect = 0.42
Identities = 22/98 (22%), Positives = 32/98 (32%), Gaps = 29/98 (29%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET-FSCD--ECSKSFTTKKCLREHYKKLHT 127
C ++LK H+R H+GE + CD C F L HY+K HT
Sbjct: 4 ATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRK-HT 61
Query: 128 IRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRF 165
G ++C +C + F
Sbjct: 62 ---------------------GHRPFQCQKCD---RAF 75
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 70
Score = 72.1 bits (178), Expect = 2e-15
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Query: 1282 RLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHMR 1338
+ P C C S +++ L+ H IH ++CN C SNL HM+
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIH-ERIH--CTDRPFKCNYCSFDTKQPSNLSKHMK 58
Query: 1339 NHTGEKKY 1346
G+
Sbjct: 59 KFHGDMSG 66
Score = 66.0 bits (162), Expect = 2e-13
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
P +C C + SSK +L H RIH ++ + C C Q ++L H
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 66.0 bits (162), Expect = 2e-13
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
P +C C + SSK +L H RIH ++ + C C Q ++L H
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 63.3 bits (155), Expect = 2e-12
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
KC C + +LR+H R H DRP+ C+ C +L++H
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56
Score = 62.1 bits (152), Expect = 5e-12
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTG 2001
S C C+ + L H + +H R F+C C NL HM+ G
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 2002 EKKY 2005
+
Sbjct: 63 DMSG 66
Score = 59.0 bits (144), Expect = 7e-11
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSDSTNFKDHLDNH 704
+ + P C C S +K L H H ++CN C +N H+
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Query: 705 KGEKKYTC 712
G+
Sbjct: 61 HGDMSGPS 68
Score = 57.9 bits (141), Expect = 2e-10
Identities = 16/95 (16%), Positives = 23/95 (24%), Gaps = 28/95 (29%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRG 402
S + P C C S K L H H
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERI----------------------------HCT 34
Query: 403 EKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
++ + C C S+L H D + P +
Sbjct: 35 DRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69
Score = 57.5 bits (140), Expect = 2e-10
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 1338 RNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + C C + A+ H+ H +R FKC+YC+ + P L++H K
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 57.1 bits (139), Expect = 3e-10
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+C C + L++H RIH ++ + C C +L+ H
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 55.6 bits (135), Expect = 9e-10
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
+C C +++ + H+R +H +P++C+ C +L H + G+
Sbjct: 8 HPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS- 65
Query: 1543 VCQQCG 1548
G
Sbjct: 66 -GPSSG 70
Score = 55.6 bits (135), Expect = 9e-10
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
+C C +++ + H+R +H +P++C+ C +L H + G+
Sbjct: 8 HPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS- 65
Query: 1667 VCQQCG 1672
G
Sbjct: 66 -GPSSG 70
Score = 51.7 bits (125), Expect = 2e-08
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHT 457
S C C + K++L H H DR + C YC + P L +H+K
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 51.0 bits (123), Expect = 5e-08
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
KC C S AL+ H H ++P+ C C L+ H
Sbjct: 10 EKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56
Score = 49.8 bits (120), Expect = 1e-07
Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 21/89 (23%)
Query: 1208 VHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLC 1267
C+ C S + L H +R H + +KC C
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIH-ERIH------------------CTDRPFKCNYC 43
Query: 1268 PSITSRYDSLQQHMRLHTGEKPFSCQVCG 1296
T + +L +HM+ G+ S G
Sbjct: 44 SFDTKQPSNLSKHMKKFHGDM--SGPSSG 70
Score = 49.4 bits (119), Expect = 1e-07
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
C C +++ + H ++H T+RP+ C YC+ K+ +L +H K G
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 48.3 bits (116), Expect = 4e-07
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
KCS+C + + L+ H +H +R C C Q S L++H +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF 60
Score = 48.3 bits (116), Expect = 4e-07
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
C C S K LR H +H T RPF C +C+ K +L +H +
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Score = 46.3 bits (111), Expect = 2e-06
Identities = 13/57 (22%), Positives = 22/57 (38%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
C C K++L H+ H +R F+C++C P L +H +
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 43.6 bits (104), Expect = 1e-05
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHH 296
KC EC S + + L+ H +H ++ F C+ C + L++H + H
Sbjct: 6 SGH-PEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKFH 61
Score = 43.3 bits (103), Expect = 2e-05
Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHMFI 1712
+ C +C S + A+L H+ H R KC +NL HM
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59
Score = 42.9 bits (102), Expect = 3e-05
Identities = 16/89 (17%), Positives = 27/89 (30%), Gaps = 22/89 (24%)
Query: 264 AVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCP 323
+ + CS C K L H +R+H R +KC
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIH-ERIH-------------------CTDRPFKCN 41
Query: 324 HPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
+ C ++ + L +HM G+
Sbjct: 42 Y--CSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 41.3 bits (98), Expect = 1e-04
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNSH 2055
+ C C S +L IH H + F C++C K P +L H++
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KF 60
Query: 2056 TNRKKS 2061
Sbjct: 61 HGDMSG 66
Score = 40.2 bits (95), Expect = 3e-04
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
KC C +S + + H +H +R + C+ CS + LS+H +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58
Score = 39.0 bits (92), Expect = 6e-04
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVH 1801
CS C S ++ LR H +H ++ C C K+ L +HM
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 37.9 bits (89), Expect = 0.002
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+ C +C S + A+L H+ H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIH 32
Score = 35.9 bits (84), Expect = 0.009
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
++ FKC C S L KH+ G+ S
Sbjct: 34 TDR-PFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69
Score = 35.2 bits (82), Expect = 0.020
Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
+C +C + A L+ H R H + F C+ CS L +H KK
Sbjct: 6 SGHPEKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKK-FH 61
Score = 32.5 bits (75), Expect = 0.18
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVC 1436
C+ C +++ L H +IH T RP +C+ C
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYC 43
Score = 31.3 bits (72), Expect = 0.35
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTH 513
C C ++ L H R H TDR C C+ + K +L +H
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 31.3 bits (72), Expect = 0.38
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC+ C + L H+ G+ + +
Sbjct: 38 FKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 72.3 bits (178), Expect = 3e-15
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 12/102 (11%)
Query: 1272 SRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNV--CGRV 1326
+ R+H + P C K + HLK H H G Y+C C
Sbjct: 4 GSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHL-RTHT--GEKPYKCTWEGCDWR 56
Query: 1327 LTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTH 1368
S L H R HTG K + C +C + F++ H H
Sbjct: 57 FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 64.6 bits (158), Expect = 2e-12
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 23/104 (22%)
Query: 1209 HRGERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKC-- 1264
R C C K + + S L H R+H GE YKC
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAH-LRTHT------------------GEKPYKCTW 50
Query: 1265 PLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
C +R D L +H R HTG KPF C VC +SF+ +HL H
Sbjct: 51 EGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH 94
Score = 64.2 bits (157), Expect = 2e-12
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQC--KVCDRAFFDVYNL 1992
IH + C KV+ + S L+ H++ H + ++C + CD F L
Sbjct: 9 DLEKRRIHYCDYPG----CTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDEL 63
Query: 1993 KLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHIN 2029
H R HTG K + C C SF L +H H N
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 62.6 bits (153), Expect = 7e-12
Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Query: 1738 LERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHS-NKNHIC--EICGKSFKKKDLL 1794
+ H C C Y +L+ H+ H+ K + C E C F + D L
Sbjct: 9 DLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 1795 REHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
H H+ +PF C CN F HL H + H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 62.3 bits (152), Expect = 1e-11
Identities = 29/112 (25%), Positives = 40/112 (35%), Gaps = 32/112 (28%)
Query: 625 KYKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTC--DVCGKSFVAKKHLNRHYNCSHAGF 680
+ C C ++T+ L+ H+RTHTG++PY C + C F L RHY
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY------- 67
Query: 681 GYQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSH 732
R H G K + C +C F L H H
Sbjct: 68 --------RK-------------HTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 58.0 bits (141), Expect = 3e-10
Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 25/106 (23%)
Query: 571 HSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKC 628
R + C C+K + + L H R H G YKC
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAH-LRTHT--------------------GEKPYKC 48
Query: 629 HI--CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
CD F R D L H R HTG +P+ C VC +SF HL H
Sbjct: 49 TWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALH 94
Score = 56.9 bits (138), Expect = 7e-10
Identities = 25/102 (24%), Positives = 33/102 (32%), Gaps = 8/102 (7%)
Query: 330 SFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHI--CGST 386
S E H + P C K + L AH + H G K Y+C C
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWR 56
Query: 387 MSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
+ + H H G K + C C F+ L H H
Sbjct: 57 FARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 56.9 bits (138), Expect = 1e-09
Identities = 30/130 (23%), Positives = 38/130 (29%), Gaps = 34/130 (26%)
Query: 635 FTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDS 694
R H D P C K + HL
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHL------------------------- 33
Query: 695 TNFKDHLDNHKGEKKYTC--EICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKT 752
K HL H GEK Y C E C F L H H+ + FQC C + +
Sbjct: 34 ---KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH 90
Query: 753 LKEHEQTHRS 762
L H + H++
Sbjct: 91 LALHMKRHQN 100
Score = 56.1 bits (136), Expect = 1e-09
Identities = 31/114 (27%), Positives = 35/114 (30%), Gaps = 48/114 (42%)
Query: 246 CPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHD 305
P C + Y S LK HL HTGEK
Sbjct: 20 YPGCTKVYTKSSHLKAHLRTHTGEKP---------------------------------- 45
Query: 306 LRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSF 359
YKC GC F R + L H HTG KP+ C C +SF
Sbjct: 46 --------------YKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSF 85
Score = 55.7 bits (135), Expect = 2e-09
Identities = 29/143 (20%), Positives = 43/143 (30%), Gaps = 58/143 (40%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC--EACGKSFPLKRRLNAHYNKWHLG 375
R + C +PGC + + + L+ H+ +HTGEKPY C E C F
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF---------------- 57
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYP 435
+ + H H G K + C C F+ L
Sbjct: 58 ------------ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL-------------- 91
Query: 436 CTYCERKYQSPKTLKEHLKVHTS 458
H+K H +
Sbjct: 92 --------------ALHMKRHQN 100
Score = 55.3 bits (134), Expect = 3e-09
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 1474 RSESSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYEC--DTCGHGLSSKKSL 1529
S ++I+ CD C K T ++ H R+ H KPY+C + C + L
Sbjct: 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDEL 63
Query: 1530 DDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
HYR HTG K + C C SF++ L H H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 55.3 bits (134), Expect = 3e-09
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 1598 RSESSESSKKIYECDI--CKKQVTNRKNMIDHQRSVHELLKPYEC--DTCGHGLSSKKSL 1653
S ++I+ CD C K T ++ H R+ H KPY+C + C + L
Sbjct: 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKCTWEGCDWRFARSDEL 63
Query: 1654 DDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
HYR HTG K + C C SF++ L H H
Sbjct: 64 TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 54.6 bits (132), Expect = 6e-09
Identities = 33/103 (32%), Positives = 41/103 (39%), Gaps = 23/103 (22%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKV 1242
+ C C K YT+ LK HL H GE+ CT CD F + LT HY R H
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY-RKH---- 70
Query: 1243 TRVNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHT 1285
G ++C +C SR D L HM+ H
Sbjct: 71 --------------TGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 52.6 bits (127), Expect = 2e-08
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 25/106 (23%)
Query: 548 KYKC--PLCDRIYTSFSETKRHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMR 603
+ C P C ++YT S K H H+GE+ Y C+ C F + L+ HYR+ H
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HT-- 71
Query: 604 VSMARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHT 649
G ++C +C+ F+R D L LH++ H
Sbjct: 72 ------------------GAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 52.2 bits (126), Expect = 4e-08
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 12/102 (11%)
Query: 1760 SYANPGNLRTHMVVHSNKNHICEI--CGKSFKKKDLLREHMIVHSTLRPFLC--EFCNAG 1815
S + G + H C+ C K + K L+ H+ H+ +P+ C E C+
Sbjct: 2 SSGSSGPDLEKR-----RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56
Query: 1816 FKCRKHLLQHYRTHTKPKATNSFSSSKCEESFDNCNNLWSHM 1857
F L +HYR HT K F C SF ++L HM
Sbjct: 57 FARSDELTRHYRKHTGAKP---FQCGVCNRSFSRSDHLALHM 95
Score = 51.5 bits (124), Expect = 7e-08
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 732 HSKERMFQCSF--CEKKYMSPKTLKEHEQTHRSGDIKHIC--DTCGSEFNTRKNMLRHTK 787
K R+ C + C K Y LK H +TH +G+ + C + C F + RH +
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTH-TGEKPYKCTWEGCDWRFARSDELTRHYR 68
Query: 788 VHSTERPYICEYCNVSFKEKKSLVRHYKIH 817
H+ +P+ C CN SF L H K H
Sbjct: 69 KHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 49.2 bits (118), Expect = 4e-07
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 391 ANFKDHLDSHRGEKKYTCE--TCGTGFAYKSSLYHHRFTHIKDRTYPCTY--CERKYQSP 446
+ + + C+ C + S L H TH ++ Y CT+ C+ ++
Sbjct: 1 GSSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60
Query: 447 KTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
L H + HT G C C F +L H++ H
Sbjct: 61 DELTRHYRKHT-GAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 44.5 bits (106), Expect = 2e-05
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKR 293
GEK +KC C + EL +H HTG K F C VC R F + L H KR
Sbjct: 42 GEK-PYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR 97
Score = 42.6 bits (101), Expect = 9e-05
Identities = 27/105 (25%), Positives = 33/105 (31%), Gaps = 32/105 (30%)
Query: 1971 HEKIRDFQCKV--CDRAFFDVYNLKLHMRIHTGEKKYVC--ETCGASFVHWGSLNIHNYS 2026
EK R C C + + +LK H+R HTGEK Y C E C F L H
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRH--- 66
Query: 2027 HINAQFVCSFCGNTYKNPKSLDSHIRNSHTNRKKSICDDCTKAMS 2071
HT K C C ++ S
Sbjct: 67 -------------------------YRKHTGAKPFQCGVCNRSFS 86
Score = 41.8 bits (99), Expect = 2e-04
Identities = 25/103 (24%), Positives = 34/103 (33%), Gaps = 11/103 (10%)
Query: 415 FAYKSSLYHHRFTHIKDRTYPCT--YCERKYQSPKTLKEHLKVHTSGDVRHIC--QTCGS 470
R R + C C + Y LK HL+ HT G+ + C + C
Sbjct: 3 SGSSGPDLEKR------RIHYCDYPGCTKVYTKSSHLKAHLRTHT-GEKPYKCTWEGCDW 55
Query: 471 EFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTH 513
F L H R H + C +CN + L H H
Sbjct: 56 RFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 34.9 bits (81), Expect = 0.039
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 766 KHICD--TCGSEFNTRKNMLRHTKVHSTERPYIC--EYCNVSFKEKKSLVRHYKIHKGV 820
H CD C + ++ H + H+ E+PY C E C+ F L RHY+ H G
Sbjct: 15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Score = 32.2 bits (74), Expect = 0.32
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 32/129 (24%)
Query: 1648 SSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEESFDNCNNLW 1707
S + RIH + C +T+ + L H +H+ + KC +++ C+ W
Sbjct: 4 GSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKC--TWEGCD--W 55
Query: 1708 SHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNL 1767
F + ++ L RH +K HT + C C S++ +L
Sbjct: 56 R--FARSDE---------------------LTRHYRK-HTGAKPFQCGVCNRSFSRSDHL 91
Query: 1768 RTHMVVHSN 1776
HM H N
Sbjct: 92 ALHMKRHQN 100
Score = 31.1 bits (71), Expect = 0.97
Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 1485 YECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHT 1537
Y+C C + + H R H KP++C C S L H + H
Sbjct: 46 YKCTWEGCDWRFARSDELTRHYRK-HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 31.1 bits (71), Expect = 0.97
Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 1609 YECDI--CKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHT 1661
Y+C C + + H R H KP++C C S L H + H
Sbjct: 46 YKCTWEGCDWRFARSDELTRHYRK-HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 30.3 bits (69), Expect = 1.8
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 90 LKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
L +H R H+G F C C++SF+ L H K H
Sbjct: 63 LTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALH-MKRHQ 99
Score = 28.7 bits (65), Expect = 6.9
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 29/93 (31%)
Query: 76 QCPDCHTMMKNFAYLKKHVRDNHSGET-FSC--DECSKSFTTKKCLREHYKKLHTIRIRS 132
P C + ++LK H+R H+GE + C + C F L HY+K HT
Sbjct: 19 DYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRK-HT----- 71
Query: 133 SREENDMKKKTMVYVEGVVKYKCPECGFMVKRF 165
G ++C C + F
Sbjct: 72 ----------------GAKPFQCGVCN---RSF 85
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 78
Score = 71.3 bits (175), Expect = 4e-15
Identities = 16/96 (16%), Positives = 26/96 (27%), Gaps = 31/96 (32%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHT-- 1341
+G C++CG + ++L H R H
Sbjct: 2 SSGSSGLQCEICGFTC----------------------------RQKASLNWHQRKHAET 33
Query: 1342 -GEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
++ CE CGK F + S H+
Sbjct: 34 VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69
Score = 63.2 bits (154), Expect = 3e-12
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSE---ERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+G CEICG Q AS +H+ H+E F C +C F P ++ H+
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 62.4 bits (152), Expect = 4e-12
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHT---GEKKYVCQQCGASFTQWASLFYHKFSHSETR 1692
+C+ CG K SL+ H R H ++ C+ CG F + S+ H+
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 1693 NQKCEES 1699
+ES
Sbjct: 66 LLAPQES 72
Score = 61.3 bits (149), Expect = 1e-11
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMK--AVHEKIRDFQCKVCDRAFFDVYNLKLHMRIH 1999
SG C IC + ++L H + A F C+ C + F ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 2000 TGEKKYVCETC 2010
+
Sbjct: 62 HPALLLAPQES 72
Score = 60.9 bits (148), Expect = 2e-11
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHT---GEKKYVCETCGASFVHWGSLNIHNYSH 2027
QC++C +L H R H ++ CE CG F S+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 60.9 bits (148), Expect = 2e-11
Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHT---GEKKYVCQQCGASFTQWASLFYHKFSH 1564
+C+ CG K SL+ H R H ++ C+ CG F + S+ H+
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 59.3 bits (144), Expect = 6e-11
Identities = 17/99 (17%), Positives = 26/99 (26%), Gaps = 25/99 (25%)
Query: 648 HTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGE 707
+G C++CG + K LN H HA
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHA------------------------ETVAA 36
Query: 708 KKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKK 746
++ CE CG F S+ H+ +
Sbjct: 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75
Score = 59.0 bits (143), Expect = 9e-11
Identities = 19/93 (20%), Positives = 24/93 (25%), Gaps = 25/93 (26%)
Query: 344 HTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGE 403
+G CE CG + K LN H R H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWH---------QRKH----------------AETVAA 36
Query: 404 KKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
++ CE CG F S+ HR
Sbjct: 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69
Score = 57.4 bits (139), Expect = 3e-10
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSK---ERMFQCSFCEKKYMSPKTLKEHEQTH 760
G CEICG K+SL+ H+ H++ F C FC K++ P ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 761 RSGDIKHICDTCGSEF 776
+ ++ G
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 55.9 bits (135), Expect = 1e-09
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRT---YPCTYCERKYQSPKTLKEHLKVH 456
G CE CG K+SL H+ H + +PC +C ++++ P ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 457 TSGDVRHICQTCGSEF 472
+ ++ G
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 54.7 bits (132), Expect = 3e-09
Identities = 19/94 (20%), Positives = 26/94 (27%), Gaps = 19/94 (20%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHI 630
SG C IC K L+ H +R H ++ C
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWH-QRKHA-----------------ETVAALRFPCEF 43
Query: 631 CDSIFTRYDSLRLHVRT-HTGDRPYTCDVCGKSF 663
C F + DS+ H H + G S
Sbjct: 44 CGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77
Score = 54.3 bits (131), Expect = 3e-09
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHSN----KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
C CG + +L H H+ CE CGK F+K D + H
Sbjct: 10 CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69
Query: 1810 E 1810
+
Sbjct: 70 Q 70
Score = 53.9 bits (130), Expect = 4e-09
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 1999 HTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ----FVCSFCGNTYKNPKSLDSHIRNS 2054
+G CE CG + SLN H H F C FCG ++ P S+ +H S
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 2055 HTNRKKSICDDCTKA 2069
H + + +
Sbjct: 62 HPALLLAPQESSGPS 76
Score = 53.9 bits (130), Expect = 6e-09
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTL---RPFLCEFCNAGFKCRKHLLQHYRTH 1829
CEICG + ++K L H H+ F CEFC F+ + H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 52.0 bits (125), Expect = 2e-08
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 1485 YECDICKKQVTNRKNMIDHQR--SVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
+C+IC + ++ HQR + + C+ CG S+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 1543 VCQQC 1547
Q+
Sbjct: 68 APQES 72
Score = 52.0 bits (125), Expect = 2e-08
Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 1609 YECDICKKQVTNRKNMIDHQR--SVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
+C+IC + ++ HQR + + C+ CG S+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 1667 VCQQC 1671
Q+
Sbjct: 68 APQES 72
Score = 51.6 bits (124), Expect = 3e-08
Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 20/95 (21%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHP 325
+G C +C K LN H +R H ++ C
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWH-QRKH----------------AETVAALRFPCEF- 43
Query: 326 GCPSSFQRFNALQEHM-LSHTGEKPYTCEACGKSF 359
C F++ +++ H SH E+ G S
Sbjct: 44 -CGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77
Score = 50.9 bits (122), Expect = 6e-08
Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Query: 1660 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQK------CEESFDNCNNLWSHMFIK 1713
+G C+ CG + Q ASL +H+ H+ET C + F+ +++ +H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 1714 HEDSDFVCNLCPPDS 1728
H S
Sbjct: 62 HPALLLAPQESSGPS 76
Score = 50.9 bits (122), Expect = 6e-08
Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 36/109 (33%)
Query: 1536 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALF 1595
+G C+ CG + Q ASL +H+ H+E
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAE----------------------------- 32
Query: 1596 TERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1644
+ + C+ C K+ ++ H+ H L ++ G
Sbjct: 33 -------TVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 50.5 bits (121), Expect = 9e-08
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 767 HICDTCGSEFNTRKNMLRHTKVHST---ERPYICEYCNVSFKEKKSLVRHYKIH 817
C+ CG + ++ H + H+ + CE+C F++ S+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 48.2 bits (115), Expect = 5e-07
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVH---RGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVT 1243
+C C T + L H H C C K F + + H +SH +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 1244 RVNQLKKKSE 1253
+ S
Sbjct: 68 APQESSGPSS 77
Score = 48.2 bits (115), Expect = 6e-07
Identities = 15/93 (16%), Positives = 25/93 (26%), Gaps = 17/93 (18%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCP 1268
G + C +C + Q + L H +R H ++ C C
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWH-QRKHAET---------------VAALRFPCEFCG 45
Query: 1269 SITSRYDSLQQHMRLHTGEK-PFSCQVCGKSFA 1300
+ DS+ H + G S
Sbjct: 46 KRFEKPDSVAAHRSKSHPALLLAPQESSGPSSG 78
Score = 46.2 bits (110), Expect = 3e-06
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 5/61 (8%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHT---GEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
G +C C + + L H H F C C + F + + H +
Sbjct: 4 GSS-GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAH-RSKS 61
Query: 296 H 296
H
Sbjct: 62 H 62
Score = 45.1 bits (107), Expect = 6e-06
Identities = 14/71 (19%), Positives = 23/71 (32%)
Query: 1805 RPFLCEFCNAGFKCRKHLLQHYRTHTKPKATNSFSSSKCEESFDNCNNLWSHMFIKHENS 1864
CE C + + L H R H + A F C + F+ +++ +H H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 1865 DFVCNLCPPDS 1875
S
Sbjct: 66 LLAPQESSGPS 76
Score = 42.0 bits (99), Expect = 7e-05
Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHS---GERKYTCSICSKCFFIKNRLSEHYRRVH 600
+C +C + H H+ ++ C C K F + ++ H + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 40.9 bits (96), Expect = 2e-04
Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGET----FSCDECSKSFTTKKCLREHYKKLH 126
G QC C + A L H R H+ F C+ C K F + H K H
Sbjct: 4 GSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Query: 127 T 127
Sbjct: 63 P 63
Score = 40.1 bits (94), Expect = 3e-04
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 24/96 (25%)
Query: 1426 STG-RPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKI 1484
S+G QC++C + + L HQ R + +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNW------HQ-----------------RKHAETVAALR 38
Query: 1485 YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1520
+ C+ C K+ ++ H+ H L ++ G
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 39.7 bits (93), Expect = 5e-04
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTG---RPHQCDVCNAKFKLRKYLKH 1448
C CG + +L H + H+ C+ C +F+ +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAA 56
Score = 39.7 bits (93), Expect = 6e-04
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Query: 463 HICQTCGSEFHTRKNLLTHIRTHNTDRTH---VCELCNANLKTRRSLLRHYTTH 513
C+ CG + +L H R H CE C + S+ H +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 34.3 bits (79), Expect = 0.039
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 789 HSTERPYICEYCNVSFKEKKSLVRHYKIH 817
S CE C + ++K SL H + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKH 30
Score = 32.0 bits (73), Expect = 0.30
Identities = 11/98 (11%), Positives = 18/98 (18%), Gaps = 31/98 (31%)
Query: 180 KDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKIFNVNKEDCQIMQG 239
C +CG L H R+H
Sbjct: 6 SGLQCEICGFTCRQKASLNWH-QRKHAET-----------------------------VA 35
Query: 240 EKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVC 277
+F C C + + + H +
Sbjct: 36 AL-RFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQES 72
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 68.7 bits (169), Expect = 2e-14
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 1282 RLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG--YQCNVCGRVLTDSSNLKVHMRN 1339
GE + C+VC + + + RH+ H + Y C C + T N+ H++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 1340 HTG 1342
Sbjct: 63 IHK 65
Score = 59.5 bits (145), Expect = 3e-11
Identities = 19/89 (21%), Positives = 26/89 (29%), Gaps = 26/89 (29%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHK 705
T G+ Y C VC + + + RHY SH +
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSH--------------------------KR 36
Query: 706 GEKKYTCEICGTGFMYKSSLHHHKFSHSK 734
K Y C C F K ++ H K
Sbjct: 37 NVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 57.9 bits (141), Expect = 1e-10
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMK-AVHEKIRDFQCKVCDRAFFDVYNLKLHMRIH 1999
GE Y C +C++V+ S H + ++ + C C + F N+ H++I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 2000 TG 2001
Sbjct: 64 HK 65
Score = 55.3 bits (134), Expect = 1e-09
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 1257 EGETKYKCPLCPSITSRYDSLQQHMR--LHTGEKPFSCQVCGKSFAAREHLKRH 1308
EGE Y+C +C + + + +H K + C C K F ++++ H
Sbjct: 6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59
Score = 53.3 bits (129), Expect = 5e-09
Identities = 16/85 (18%), Positives = 21/85 (24%), Gaps = 26/85 (30%)
Query: 344 HTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGE 403
GE Y C+ C + + HY H R
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSH--------------------------KRNV 38
Query: 404 KKYTCETCGTGFAYKSSLYHHRFTH 428
K Y C C F K ++ H
Sbjct: 39 KVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 51.4 bits (124), Expect = 2e-08
Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 1967 MKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRI--HTGEKKYVCETCGASFVHWGSLNIHN 2024
M+ E ++CKVC R + + N H K Y C C F ++ H
Sbjct: 1 MEFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 2025 YSH 2027
Sbjct: 61 KII 63
Score = 50.6 bits (122), Expect = 5e-08
Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHK--FSHSKERMFQCSFCEKKYMSPKTLKEHEQTHR 761
+GE Y C++C + + S+ H +++ C FC K++ + H +
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 49.9 bits (120), Expect = 9e-08
Identities = 12/55 (21%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRI--HTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
Y C C + + HY K Y C C FT+ ++ H
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 49.1 bits (118), Expect = 2e-07
Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 19/80 (23%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHI 630
GE Y C +CS+ + + HY HK V Y C
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR-------------------NVKVYPCPF 45
Query: 631 CDSIFTRYDSLRLHVRTHTG 650
C FTR D++ HV+
Sbjct: 46 CFKEFTRKDNMTAHVKIIHK 65
Score = 48.3 bits (116), Expect = 3e-07
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSV-HELLKPYECDTCGHGLSSKKSLDDHYRIHTG 1538
Y C +C + T+ N H + +K Y C C + K ++ H +I
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 48.3 bits (116), Expect = 3e-07
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSV-HELLKPYECDTCGHGLSSKKSLDDHYRIHTG 1662
Y C +C + T+ N H + +K Y C C + K ++ H +I
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 48.3 bits (116), Expect = 4e-07
Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 769 CDTCGSEFNTRKNMLRH--TKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKGV 820
C C + N RH T + Y C +C F K ++ H KI +
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 47.5 bits (114), Expect = 6e-07
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMV--HRGERTMSCTMCDKSFYQVSRLTEHYKRSHRM 1240
Y+C C + YT H + R + C C K F + +T H K H++
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 47.2 bits (113), Expect = 7e-07
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 549 YKCPLCDRIYTSFSETKRHF--EVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKM 602
Y+C +C R+YT S RH+ + Y C C K F K+ ++ H + +HK+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 47.2 bits (113), Expect = 8e-07
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHL--AVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHH 296
GE ++C C R Y + S +H + K + C C + F K+ + H ++ H
Sbjct: 7 GEHT-YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH-VKIIH 64
Score = 46.8 bits (112), Expect = 1e-06
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 1781 CEICGKSFKKKDLLREHM--IVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTK 1831
C++C + + H ++ + C FC F + ++ H + K
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 46.4 bits (111), Expect = 1e-06
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLS--HTGEKPYTCEACGKSFPLKRRLNAH 368
Y+C C + + H ++ K Y C C K F K + AH
Sbjct: 11 YRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59
Score = 46.4 bits (111), Expect = 2e-06
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 1365 KFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMK 1423
+FT E +++C C+ + H T +VK + C C E+ + N+ +H+K
Sbjct: 2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Query: 1424 IH 1425
I
Sbjct: 62 II 63
Score = 43.3 bits (103), Expect = 2e-05
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHK--FSHSETRNQKCEE---SFDNCNNLWSHMFI 1712
GE Y C+ C +T ++ H + C F +N+ +H+ I
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 1713 KHE 1715
H+
Sbjct: 63 IHK 65
Score = 42.9 bits (102), Expect = 3e-05
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 1754 CSYCGNSYANPGNLRTHMVVHSN---KNHICEICGKSFKKKDLLREHMIVHSTL 1804
C C Y + N H V K + C C K F +KD + H+ + +
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 42.5 bits (101), Expect = 3e-05
Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQ---FVCSFCGNTYKNPKSLDSHIRN 2053
GE Y C+ C + H + H + + C FC + ++ +H++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 2054 SH 2055
H
Sbjct: 63 IH 64
Score = 41.4 bits (98), Expect = 8e-05
Identities = 17/81 (20%), Positives = 24/81 (29%), Gaps = 20/81 (24%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHP 325
GE + C VC R + + HY H V+ Y CP
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR------------------NVKVYPCPF- 45
Query: 326 GCPSSFQRFNALQEHMLSHTG 346
C F R + + H+
Sbjct: 46 -CFKEFTRKDNMTAHVKIIHK 65
Score = 40.6 bits (96), Expect = 2e-04
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 27/87 (31%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTSG 459
GE Y C+ C + + S+ H T H
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTS---------------------------HKRN 37
Query: 460 DVRHICQTCGSEFHTRKNLLTHIRTHN 486
+ C C EF + N+ H++ +
Sbjct: 38 VKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 40.2 bits (95), Expect = 2e-04
Identities = 17/101 (16%), Positives = 29/101 (28%), Gaps = 37/101 (36%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKA 1593
GE Y C+ C +T ++ H
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHY------VTSHK--------------------- 35
Query: 1594 LFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHEL 1634
+ K+Y C C K+ T + NM H + +H++
Sbjct: 36 ----------RNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 40.2 bits (95), Expect = 2e-04
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 8/58 (13%)
Query: 1920 FKCPDCPTILQTFR---GLKAHL--DIHSGEKDYACHICNKVFVRHSTLENHMKAVHE 1972
++C C + + H K Y C C K F R + H+K +H+
Sbjct: 11 YRCKVCS---RVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 36.0 bits (84), Expect = 0.009
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVR-DNHSGE-TFSCDECSKSFTTKKCLREHYKKLHTI 128
GE ++C C + + + +H + + C C K FT K + H K +H I
Sbjct: 7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 34.8 bits (81), Expect = 0.018
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 1805 RPFLCEFCNAGFKCRKHLLQHYRTHT----KPKATNSFSSSKCEESFDNCNNLWSHMFIK 1860
+ C+ C+ + + +HY T K + C + F +N+ +H+ I
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV-----YPCPFCFKEFTRKDNMTAHVKII 63
Query: 1861 HE 1862
H+
Sbjct: 64 HK 65
Score = 31.4 bits (72), Expect = 0.39
Identities = 17/69 (24%), Positives = 20/69 (28%), Gaps = 24/69 (34%)
Query: 98 HSGE-TFSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCP 156
GE T+ C CS+ +T HY H V Y CP
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHK--------------------RNVKVYPCP 44
Query: 157 ECGFMVKRF 165
C K F
Sbjct: 45 FCF---KEF 50
Score = 31.0 bits (71), Expect = 0.54
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 789 HSTERPYICEYCNVSFKEKKSLVRHYKIH 817
E Y C+ C+ + + RHY
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTS 33
Score = 29.8 bits (68), Expect = 1.2
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKI-HSTG-RPHQCDVCNAKFKLRKYLK 1447
+ C C Y N H H + + C C +F + +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMT 57
Score = 29.8 bits (68), Expect = 1.2
Identities = 8/51 (15%), Positives = 16/51 (31%), Gaps = 2/51 (3%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNT--DRTHVCELCNANLKTRRSLLRHYTTH 513
C+ C + N H T + + + C C + ++ H
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 28.7 bits (65), Expect = 2.8
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Query: 153 YKCPECGFMVKRFQGLREHIVSV-HAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
Y+C C + H V+ VK + C C F + H ++
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH-VKIIH 64
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 63.3 bits (155), Expect = 2e-12
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
+ C +C +R + L++H R HT EKP+ C +C ++F R+ L RH IH
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 61.3 bits (150), Expect = 6e-12
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAG 679
+ C +C F R + L+ H R+HT ++PY C +C ++F + L RH H+G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 60.6 bits (148), Expect = 2e-11
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHK 1561
+ + C+ C + ++ L HYR HT EK Y C C +FT+ L H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 60.6 bits (148), Expect = 2e-11
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHK 1685
+ + C+ C + ++ L HYR HT EK Y C C +FT+ L H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 58.3 bits (142), Expect = 9e-11
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQ 1357
+ C VC R +LK H R+HT EK Y C +C + FT+
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTR 42
Score = 56.7 bits (138), Expect = 3e-10
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 1288 KPFSCQVCGKSFAAREHLKRHFNNIHMKVG---YQCNVCGRVLTDSSNLKVHM-RNHTGE 1343
+ F C+VC ++FA +EHLKRH H Y C +C R T L H + H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRH-YRSH--TNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Query: 1344 K 1344
Sbjct: 58 L 58
Score = 52.9 bits (128), Expect = 8e-09
Identities = 21/47 (44%), Positives = 24/47 (51%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
F C+VC RAF +LK H R HT EK Y C C +F L H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 51.3 bits (124), Expect = 2e-08
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
F C C R++ LK+H HT EK + C +C R F ++ L H +++H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 51.3 bits (124), Expect = 2e-08
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
+ C C + + R LK H H E+ C +C+++F + L H ++ H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 50.2 bits (121), Expect = 7e-08
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG 375
+ C C +F R L+ H SHT EKPY C C ++F + L H K H G
Sbjct: 3 FVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 48.3 bits (116), Expect = 3e-07
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 1946 KDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM-RIHTGEK 2003
+ + C +C + F R L+ H + H + + C +C+RAF L H +IH+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 46.7 bits (112), Expect = 1e-06
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHY-RTHT 1830
++ +CE+C ++F +++ L+ H H+ +P+ C CN F R L++H + H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 46.3 bits (111), Expect = 1e-06
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+ C +C R + KRH+ H+ E+ Y C +C++ F ++ L H +++H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 44.4 bits (106), Expect = 7e-06
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHY-RIHTGEK 1540
+ + C++C + ++++ H RS H KPY C C + + L H +IH+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 44.4 bits (106), Expect = 7e-06
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHY-RIHTGEK 1664
+ + C++C + ++++ H RS H KPY C C + + L H +IH+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 44.4 bits (106), Expect = 8e-06
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 28/78 (35%)
Query: 652 RPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKKYT 711
R + C+VC ++F ++HL RHY R H EK Y
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY---------------RS-------------HTNEKPYP 32
Query: 712 CEICGTGFMYKSSLHHHK 729
C +C F + L H
Sbjct: 33 CGLCNRAFTRRDLLIRHA 50
Score = 42.9 bits (102), Expect = 2e-05
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 767 HICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHY-KIHKG 819
+C+ C F ++++ RH + H+ E+PY C CN +F + L+RH KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 41.7 bits (99), Expect = 6e-05
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 1920 FKCPDCPTILQTFRG---LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH 1971
F C C + F LK H H+ EK Y C +CN+ F R L H + +H
Sbjct: 3 FVCEVCT---RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 41.3 bits (98), Expect = 9e-05
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 708 KKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDI 765
+ + CE+C F + L H SH+ E+ + C C + + L H Q SG++
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 40.9 bits (97), Expect = 1e-04
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHH 424
+ + C +C + + K H SH EK Y C C F + L H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 40.2 bits (95), Expect = 2e-04
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 1344 KKYVCEICGKGFTQWASH-YYHKFTHSEERSFKCSYCAMTFRCPRTLTEH-KKTH 1396
+ +VCE+C + F + H H +H+ E+ + C C F L H +K H
Sbjct: 1 RSFVCEVCTRAFAR-QEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 38.6 bits (91), Expect = 7e-04
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 20/73 (27%)
Query: 1217 CTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCPSITSRYDS 1276
C +C ++F + L H RSH T E Y C LC +R D
Sbjct: 5 CEVCTRAFARQEHLKRH-YRSH----T--------------NEKPYPCGLCNRAFTRRDL 45
Query: 1277 LQQHM-RLHTGEK 1288
L +H ++H+G
Sbjct: 46 LIRHAQKIHSGNL 58
Score = 37.9 bits (89), Expect = 0.001
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 404 KKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHL-KVHT 457
+ + CE C FA + L H +H ++ YPC C R + L H K+H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 36.3 bits (85), Expect = 0.005
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 75 FQCPDCHTMMKNFA---YLKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
F C C + FA +LK+H R +H+ E + C C+++FT + L H +K+H+
Sbjct: 3 FVCEVCT---RAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 35.9 bits (84), Expect = 0.008
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1753 VCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHM 1798
VC C ++A +L+ H H+N K + C +C ++F ++DLL H
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 33.6 bits (78), Expect = 0.043
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 1805 RPFLCEFCNAGFKCRKHLLQHYRTHTKPK 1833
R F+CE C F ++HL +HYR+HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 32.1 bits (74), Expect = 0.18
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYL 1446
VC C + +++L H + H+ +P+ C +CN F R L
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLL 46
Score = 29.4 bits (67), Expect = 1.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 793 RPYICEYCNVSFKEKKSLVRHYKIHKG 819
R ++CE C +F ++ L RHY+ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 29.4 bits (67), Expect = 1.7
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 2003 KKYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNSHT 2056
+ +VCE C +F L H SH N + + C C + L H + H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 28.2 bits (64), Expect = 4.3
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
+ C C R + L+ H H K + C +C AF L H + H+
Sbjct: 3 FVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 27.8 bits (63), Expect = 5.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 463 HICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRH 509
+C+ C F +++L H R+H ++ + C LCN R L+RH
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 62.6 bits (153), Expect = 2e-12
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 27/78 (34%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+ KP+ CQ CGK F+ +HL H +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQV--------------------------- 35
Query: 1340 HTGEKKYVCEICGKGFTQ 1357
HT E+ + C++ G +
Sbjct: 36 HTSERPHKCQVWVSGPSS 53
Score = 54.9 bits (133), Expect = 1e-09
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 1506 SVHELLKPYECDTCGHGLSSKKSLDDHY-RIHTGEKKYVCQQCGASFTQ 1553
S + KPY C +CG G S L+ H ++HT E+ + CQ + +
Sbjct: 5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 54.9 bits (133), Expect = 1e-09
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 1630 SVHELLKPYECDTCGHGLSSKKSLDDHY-RIHTGEKKYVCQQCGASFTQ 1677
S + KPY C +CG G S L+ H ++HT E+ + CQ + +
Sbjct: 5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 53.0 bits (128), Expect = 6e-09
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNA 390
S + KPY C++CGK F LN H + H + ++C + S S+
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG 54
Score = 51.4 bits (124), Expect = 2e-08
Identities = 15/74 (20%), Positives = 22/74 (29%), Gaps = 28/74 (37%)
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHT 2000
S K Y C C K F R L H+K ++HT
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIK----------------------------QVHT 37
Query: 2001 GEKKYVCETCGASF 2014
E+ + C+ +
Sbjct: 38 SERPHKCQVWVSGP 51
Score = 51.4 bits (124), Expect = 2e-08
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCNICGRVMSD 693
+ + +PY C CGK F HLN H H ++C + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 49.5 bits (119), Expect = 9e-08
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 626 YKCHICDSIFTRYDSLRLHV-RTHTGDRPYTCDVCGKSF 663
Y C C F+R D L H+ + HT +RP+ C V
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 48.0 bits (115), Expect = 3e-07
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASH--YYHKFTHSEERSFKCSYCAMTF 1383
+ + K Y+C+ CGKGF++ H + K H+ ER KC
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSR-PDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 44.9 bits (107), Expect = 4e-06
Identities = 15/98 (15%), Positives = 25/98 (25%), Gaps = 49/98 (50%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYK 321
+ + K ++C C +GF + LN H K+V
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQV--------------------------- 35
Query: 322 CPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSF 359
HT E+P+ C+
Sbjct: 36 ----------------------HTSERPHKCQVWVSGP 51
Score = 43.0 bits (102), Expect = 2e-05
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 703 NHKGEKKYTCEICGTGFMYKSSLH-HHKFSHSKERMFQCSFCEK 745
+ K Y C+ CG GF L+ H K H+ ER +C
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49
Score = 41.8 bits (99), Expect = 5e-05
Identities = 14/93 (15%), Positives = 20/93 (21%), Gaps = 46/93 (49%)
Query: 1208 VHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLC 1267
+ C C K F + L H K
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIK-------------------------------- 33
Query: 1268 PSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFA 1300
++HT E+P CQV +
Sbjct: 34 --------------QVHTSERPHKCQVWVSGPS 52
Score = 41.8 bits (99), Expect = 5e-05
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSL-YHHRFTHIKDRTYPCTYCERKYQS 445
S K Y C++CG GF+ L H + H +R + C S
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 39.9 bits (94), Expect = 3e-04
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHM-IVHSTLRPFLCEFCNAGF 1816
+ S K +IC+ CGK F + D L H+ VH++ RP C+ +G
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 39.1 bits (92), Expect = 5e-04
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHL-AVHTGEKHFVCSVCQRGF 281
K + C C + + L H+ VHT E+ C V G
Sbjct: 9 VGK-PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 1187 YKCSDCDKTYTRFYELKCHL-MVHRGERTMSCTMCDKSF 1224
Y C C K ++R L H+ VH ER C +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 37.2 bits (87), Expect = 0.002
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYH-KFSHSETRNQKCEE 1698
+ K Y+CQ CG F++ L H K H+ R KC+
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 46
Score = 36.8 bits (86), Expect = 0.003
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 769 CDTCGSEFNTRKNMLRHTK-VHSTERPYICEYCNVSF 804
C +CG F+ ++ H K VH++ERP+ C+
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 36.0 bits (84), Expect = 0.006
Identities = 14/78 (17%), Positives = 23/78 (29%), Gaps = 27/78 (34%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSFCGNTYKNPKSLDSHIRNS 2054
+ K Y+C++CG F P L+ HI+
Sbjct: 3 SGSSGSVGKPYICQSCGKGF---------------------------SRPDHLNGHIKQV 35
Query: 2055 HTNRKKSICDDCTKAMST 2072
HT+ + C S+
Sbjct: 36 HTSERPHKCQVWVSGPSS 53
Score = 35.2 bits (82), Expect = 0.010
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYH 1560
+ K Y+CQ CG F++ L H
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGH 31
Score = 34.9 bits (81), Expect = 0.014
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 549 YKCPLCDRIYTSFSETKRHFE-VHSGERKYTCSICSKCF 586
Y C C + ++ H + VH+ ER + C +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 34.9 bits (81), Expect = 0.014
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYK-IHKG 819
S +PYIC+ C F L H K +H
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 38
Score = 34.1 bits (79), Expect = 0.026
Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 22/64 (34%)
Query: 97 NHSGET-FSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKC 155
+ S + C C K F+ L H K++HT +KC
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT---------------------SERPHKC 44
Query: 156 PECG 159
Sbjct: 45 QVWV 48
Score = 34.1 bits (79), Expect = 0.030
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 28/77 (36%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMK 1423
+ S + + C C F P L H K +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIK----------------------------Q 34
Query: 1424 IHSTGRPHQCDVCNAKF 1440
+H++ RPH+C V +
Sbjct: 35 VHTSERPHKCQVWVSGP 51
Score = 31.8 bits (73), Expect = 0.17
Identities = 13/39 (33%), Positives = 15/39 (38%)
Query: 153 YKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAF 191
Y C CG R L HI VH + H C V +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 31.8 bits (73), Expect = 0.17
Identities = 10/45 (22%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 1746 HTMQQRCVCSYCGNSYANPGNLRTHM-VVHSN-KNHICEICGKSF 1788
++ + +C CG ++ P +L H+ VH++ + H C++
Sbjct: 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 31.8 bits (73), Expect = 0.17
Identities = 7/45 (15%), Positives = 14/45 (31%), Gaps = 1/45 (2%)
Query: 71 GEIKFQCPDCHTMMKNFAYLKKHVRDNHSGE-TFSCDECSKSFTT 114
+ C C +L H++ H+ E C ++
Sbjct: 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 31.8 bits (73), Expect = 0.20
Identities = 11/51 (21%), Positives = 19/51 (37%)
Query: 728 HKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNT 778
S S + + C C K + P L H + + + H C S ++
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 29.5 bits (67), Expect = 1.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 1800 VHSTLRPFLCEFCNAGFKCRKHLLQHY-RTHT--KP 1832
S +P++C+ C GF HL H + HT +P
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP 41
Score = 27.9 bits (63), Expect = 4.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 465 CQTCGSEFHTRKNLLTHI-RTHNTDRTHVCELC 496
CQ+CG F +L HI + H ++R H C++
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation, hydrophobic
core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Length = 85
Score = 61.9 bits (151), Expect = 8e-12
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 1318 YQCNV--CGRVLTDSSNLKVHMRNHTGEKKYVC--EICGKGFTQWASHYYHKFTHSEERS 1373
Y C+ CG+ + LKVH +HT + Y C E C K F+ + H+ H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 1374 FKCSYCAMTFRCPRTLTEH-KKTH 1396
K C+ + +H + H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 59.9 bits (146), Expect = 4e-11
Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 32/107 (29%)
Query: 1262 YKCPL--CPSITSRYDSLQQHMRLHTGEKPFSC--QVCGKSFAAREHLKRHFNNIHMKVG 1317
Y C C +++ L+ H HT + P+ C + C K F+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFS----------------- 44
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYH 1364
S LK H + H G + C W + H
Sbjct: 45 -----------LPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 80
Score = 57.6 bits (140), Expect = 3e-10
Identities = 25/112 (22%), Positives = 34/112 (30%), Gaps = 31/112 (27%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC--EACGKSFPLKRRLNAHYNKWHLGKG 377
Y C C +F++ N L+ H SHT + PY C E C K F
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF------------------ 43
Query: 378 YRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLY-HHRFTH 428
S + K H H G ++C + H H
Sbjct: 44 ----------SLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 57.2 bits (139), Expect = 4e-10
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 1948 YACHI--CNKVFVRHSTLENHMKAVHEKIRDFQCKV--CDRAFFDVYNLKLHMRIHTGEK 2003
Y CH C K F +H+ L+ H H + ++C CD+ F LK H ++H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 2004 KYVCETCGASFVHWGSLNIH 2023
++C W H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
Score = 52.6 bits (127), Expect = 2e-08
Identities = 24/112 (21%), Positives = 33/112 (29%), Gaps = 33/112 (29%)
Query: 626 YKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFG 681
Y CH C F +++ L++H +HT PY C C K F L RH
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE-------- 53
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSL-HHHKFSH 732
+V H G + C + H H
Sbjct: 54 -------KV-------------HAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 51.9 bits (125), Expect = 3e-08
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Query: 1484 IYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTGE 1539
+Y C C K + HQ S H PYEC C S L H ++H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59
Query: 1540 KKYVCQQCGASFTQWASLFYH 1560
C W H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKH 80
Score = 51.9 bits (125), Expect = 3e-08
Identities = 21/81 (25%), Positives = 25/81 (30%), Gaps = 5/81 (6%)
Query: 1608 IYECDI--CKKQVTNRKNMIDHQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTGE 1663
+Y C C K + HQ S H PYEC C S L H ++H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFS-HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59
Query: 1664 KKYVCQQCGASFTQWASLFYH 1684
C W H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKH 80
Score = 51.9 bits (125), Expect = 3e-08
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 21/100 (21%)
Query: 1216 SCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKC--PLCPSITSR 1273
C K+F + ++L H + SH + Y+C C S
Sbjct: 5 HFENCGKAFKKHNQLKVH-QFSHT------------------QQLPYECPHEGCDKRFSL 45
Query: 1274 YDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
L++H ++H G C +H H
Sbjct: 46 PSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 48.4 bits (116), Expect = 6e-07
Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 1751 RCVCSYCGNSYANPGNLRTHMVVHSN-KNHIC--EICGKSFKKKDLLREHMIVHSTLRPF 1807
C CG ++ L+ H H+ + C E C K F L+ H VH+
Sbjct: 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCK 62
Query: 1808 LCEFCNAGFKCRKHLLQHY-RTH 1829
+ C+ K L+H H
Sbjct: 63 KDDSCSFVGKTWTLYLKHVAECH 85
Score = 46.5 bits (111), Expect = 2e-06
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWH 373
Y+CPH GC F + L+ H H G ++C H + H
Sbjct: 28 QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 43.8 bits (104), Expect = 2e-05
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 1638 YECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQ--CGASFTQWASLFYHKFSHSETRN 1693
Y C CG L H HT + Y C C F+ + L H+ H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 1694 QKCEE 1698
+K +
Sbjct: 62 KKDDS 66
Score = 41.8 bits (99), Expect = 9e-05
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 737 MFQCSF--CEKKYMSPKTLKEHEQTHRSGDIKHICD--TCGSEFNTRKNMLRHTKVHSTE 792
M+ C F C K + LK H+ +H + + + C C F+ + RH KVH+
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSH-TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 59
Query: 793 RPYICEYCNVSFKEKKSLVRHYK 815
+ C+ K ++H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKHVA 82
Score = 41.8 bits (99), Expect = 1e-04
Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 682 YQCNI--CGRVMSDSTNFKDHLDNHKGEKKYTC--EICGTGFMYKSSLHHHKFSHSKERM 737
Y C+ CG+ K H +H + Y C E C F S L H+ H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 738 FQCSFCEKKYMSPKTLKEH 756
+ C + +H
Sbjct: 62 KKDDSCSFVGKTWTLYLKH 80
Score = 41.5 bits (98), Expect = 1e-04
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 549 YKC--PLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
Y+C CD+ ++ S KRH +VH+G CS +H H
Sbjct: 32 YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 39.9 bits (94), Expect = 5e-04
Identities = 20/81 (24%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 378 YRCHI--CGSTMSNAANFKDHLDSHRGEKKYTC--ETCGTGFAYKSSLYHHRFTHIKDRT 433
Y CH CG K H SH + Y C E C F+ S L H H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 434 YPCTYCERKYQSPKTLKEHLK 454
C ++ +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 39.5 bits (93), Expect = 7e-04
Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
Y+C CDK ++ LK H VH G C + +H H
Sbjct: 32 YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 39.1 bits (92), Expect = 9e-04
Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 1514 YECDT--CGHGLSSKKSLDDHYRIHTGEKKYVCQQ--CGASFTQWASLFYHKFSHSETRN 1569
Y C CG L H HT + Y C C F+ + L H+ H+
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 1570 QK 1571
+K
Sbjct: 62 KK 63
Score = 38.4 bits (90), Expect = 0.002
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ ++C C + + S LK+H VH G C +H H
Sbjct: 28 QQL-PYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 38.0 bits (89), Expect = 0.002
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSFKEKKSLVRHYKIHKG 819
+ CG F + H H+ + PY C + C+ F L RH K+H G
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58
Score = 36.1 bits (84), Expect = 0.011
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH 1971
LK H +H+G C+ V + H+ H
Sbjct: 49 LKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 35.3 bits (82), Expect = 0.024
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
Query: 434 YPCTY--CERKYQSPKTLKEHLKVHTSGDVRHIC--QTCGSEFHTRKNLLTHIRTHNTDR 489
Y C + C + ++ LK H HT + + C + C F L H + H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT-QQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 490 THVCELCNANLKTRRSLLRH 509
+ C+ KT L+H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKH 80
Score = 32.2 bits (74), Expect = 0.25
Identities = 21/103 (20%), Positives = 32/103 (31%), Gaps = 26/103 (25%)
Query: 77 CPDCHTMMKNFAYLKKHVRDNHSGET-FSCDE--CSKSFTTKKCLREHYKKLHTIRIRSS 133
+C K LK H +H+ + + C C K F+ L+ H K H
Sbjct: 6 FENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HA------ 57
Query: 134 REENDMKKKTMVYVEGVVKYKCPECGFMVKRFQGLREHIVSVH 176
G K C F+ K + +H+ H
Sbjct: 58 ---------------GYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 30.7 bits (70), Expect = 1.0
Identities = 19/125 (15%), Positives = 28/125 (22%), Gaps = 54/125 (43%)
Query: 1979 CKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSFCG 2038
+ C +AF LK+H HT + Y C G C
Sbjct: 6 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG-------------------------CD 40
Query: 2039 NTYKNPKSLDSHIRNSHTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIPKCHSCQKCE 2098
+ P L H + H K SC
Sbjct: 41 KRFSLPSRLKRHEK-VHAGYPCK----------------------------KDDSCSFVG 71
Query: 2099 ESFDN 2103
+++
Sbjct: 72 KTWTL 76
Score = 28.7 bits (65), Expect = 4.9
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 11/57 (19%)
Query: 896 CEESFSDSKFLDAHVNIEHGKRVH-GDDEFECYQCNQCGVELYLGREAFLNHMRHIH 951
C++ FS L H ++VH G + C+ G +L H+ H
Sbjct: 39 CDKRFSLPSRLKRH------EKVHAGYPCKKDDSCSFVGKT----WTLYLKHVAECH 85
Score = 28.4 bits (64), Expect = 7.3
Identities = 20/73 (27%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Query: 2005 YVC--ETCGASFVHWGSLNIHNYSHINAQ-FVCSF--CGNTYKNPKSLDSHIRNSHTNRK 2059
YVC E CG +F L +H +SH + C C + P L H + H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60
Query: 2060 KSICDDCTKAMST 2072
D C+ T
Sbjct: 61 CKKDDSCSFVGKT 73
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 69.9 bits (170), Expect = 9e-12
Identities = 98/722 (13%), Positives = 202/722 (27%), Gaps = 190/722 (26%)
Query: 1067 QEHEEHLNKSTIIVDGVVKFQCPHCNINHDDLVSLKQHIVEAHVPSISCSHCEMKFKNL- 1125
H H++ T G ++Q D++ +A V + C + K++
Sbjct: 1 HHHHHHMDFET----GEHQYQY-------KDIL---SVFEDAFVDNFDCKDVQDMPKSIL 46
Query: 1126 --KDFKEHMTSVHLNKRNLRDDTMYCELTEEEITLNIDDMHAPNRTVESDREKYKLVEGD 1183
++ + S LR EE + ++++ N YK +
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---------YKFLM-S 96
Query: 1184 QVRYKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYK-RSHRMKV 1242
++ + + E ++ + + K Y VSRL + K R
Sbjct: 97 PIKTEQRQPSMMTRMYIE--QRDRLYNDNQVFA-----K--YNVSRLQPYLKLRQA---- 143
Query: 1243 TRVNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSF--- 1299
+ +L+ + I+G + G GK++
Sbjct: 144 --LLELRPAKNVLIDG----------------------V---LG--------SGKTWVAL 168
Query: 1300 -AAREH-LKRHF-NNIH-MKVGYQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGF 1355
+ ++ I + + CN VL L + +
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLK-NCNSPETVLEMLQKLLYQID--------------PNW 213
Query: 1356 TQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTR 1415
T + H + + + L VL +V++
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL------VLLNVQN------------ 255
Query: 1416 KNLLSHMKIHS----TGRPHQ-CDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKAL 1470
+ + T R Q D +A L H S + +V KS+ K+ L
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV--KSLLLKY--L 311
Query: 1471 FTERSESSESSKKI--YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKS 1528
+ I + + + D+ K CD + + S
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN-------WKHVNCDKLTTII--ESS 362
Query: 1529 LDDHYRIHTGEKKYVCQQCGASF-------TQWASLFYHKFSHSETRNQKHVSASSCHQK 1581
L+ + E + + + + F T SL + S+ V + H
Sbjct: 363 LNV---LEPAEYRKMFDRL-SVFPPSAHIPTILLSLIWFDVIKSDVM----VVVNKLH-- 412
Query: 1582 VPNKSVTAKFKALFTERSESSESSKKIYECDI-CKKQVTNRKNMIDHQRSV--HELLKPY 1638
S+ K + ES+ I + K ++ N + H+ V + + K +
Sbjct: 413 --KYSLVEK---------QPKESTISIPSIYLELKVKLENEYAL--HRSIVDHYNIPKTF 459
Query: 1639 ECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFY------HKFSHSETR 1692
+ D LD ++ H G + T + +F K H T
Sbjct: 460 DSDDL-----IPPYLDQYFYSHIGHHLKNIEH-PERMTLFRMVFLDFRFLEQKIRHDSTA 513
Query: 1693 NQKCEESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRC 1752
+ L ++ ++C+ P ++V L + + + + +
Sbjct: 514 WNASGSILNTLQQL-----KFYKP--YICDNDPKYERLVNAILDFLPKI--EENLICSKY 564
Query: 1753 VC 1754
Sbjct: 565 TD 566
Score = 63.7 bits (154), Expect = 7e-10
Identities = 92/630 (14%), Positives = 186/630 (29%), Gaps = 187/630 (29%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKV 455
H+D GE +Y YK L + + + C + PK+ +
Sbjct: 6 HMDFETGEHQYQ---------YKDILSVFEDAFVDN--FDCKDVQ---DMPKS------I 45
Query: 456 HTSGDVRHICQTCGSEFHTR-----------------------KN---LLTHIRTHNTDR 489
+ ++ HI + + T N L++ I+T
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105
Query: 490 THVCE--------LCNAN--------------LKTRRSL--LRHY---TTHG------TQ 516
+ + L N N LK R++L LR G T
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165
Query: 517 LAAIAFNNSQSSSSDHRLVKSEVQILEGDRI------KYKCP---------LCDRIYTSF 561
+A + +VQ +I P L +I ++
Sbjct: 166 VALDVCLS------------YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 562 SETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVD 621
+ H + +I + I+ L + + +V ++A+ +
Sbjct: 214 TSRSDH----------SSNIKLRIHSIQAELRRLLKS-KPYENCLLVLLNV-QNAKA-WN 260
Query: 622 GVTKYKCHICDSIFTRYDSL--------RLHVRTHTGDRPYTCDVCGKSFVAKKHLN--- 670
C I + TR+ + H+ T D KS + K L+
Sbjct: 261 AF-NLSCKIL--LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSLLLKY-LDCRP 315
Query: 671 ---RHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHH 727
+ + +I + D DN K C+ T + +SSL+
Sbjct: 316 QDLPREVLTTNPR--RLSIIAESIRD---GLATWDNW---KHVNCDKLTT--IIESSLNV 365
Query: 728 HKFSHSKERMFQCS-FCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNML-RH 785
+ + ++ + S F ++ L D+ + + + +++ +
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL-----HKYSLVEKQ 420
Query: 786 TK-----VHSTERPYICEYCNVSFKEKKSLVRHYKIHKGVNTNTL--PSND------IIK 832
K + S + N + +V HY I K +++ L P D I
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRS-IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479
Query: 833 HMRNAHQYDIIQA-----QDY------LIQSTQEIDLPCEMCGELNLFSKYCKEHGIVCE 881
H++N + + D+ + + + + L Y K + +C+
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFY-KPY--ICD 536
Query: 882 ESDTYKKKTHSCIY----CEESFSDSKFLD 907
Y++ ++ + EE+ SK+ D
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICSKYTD 566
Score = 62.2 bits (150), Expect = 2e-09
Identities = 92/670 (13%), Positives = 182/670 (27%), Gaps = 211/670 (31%)
Query: 813 HYKIHKGVNTNTLPSNDIIKHMRNA--HQYDIIQAQDYL--IQSTQEID----LPCEMCG 864
H+ + + DI+ +A +D QD I S +EID + G
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 865 ELNLFSKYC-KEHGIVCEESDTYKKKTHSCIYCEESFSD---SKFLDAHVNIEHGKRVHG 920
L LF K+ +V + + + + + + + IE R++
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM--SPIKTEQRQPSMMTRMYIEQRDRLYN 121
Query: 921 DDE-FECYQCNQCGVELYLGREAFLNHMRHIHSDDTTHDMLDNYVVKH----------VA 969
D++ F Y ++ ++ YL L +R V+
Sbjct: 122 DNQVFAKYNVSR--LQPYLKLRQALLELRP-----------AKNVLIDGVLGSGKTWVAL 168
Query: 970 DITTPCILCKDPSLFSMFCVKHDARI---SIHHCDSHNDRHHKCTLCDAVFTNCENVWKH 1026
D+ C + D +I ++ +C+S + V + +
Sbjct: 169 DV------CLSYKVQCKM----DFKIFWLNLKNCNSP----------ETVLEMLQKLLYQ 208
Query: 1027 KFLVHSDENLACNLCEEED-PITIKSPSALMKHWRQWHWRLQEHEEHLNKSTIIVDGV-- 1083
+ N D IK ++ + + + +E L +++ V
Sbjct: 209 ---------IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL----LVLLNVQN 255
Query: 1084 ------VKFQCP--------------------HCNINHD----------DLVSLKQHIVE 1107
C H +++H L+
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315
Query: 1108 AHVPSISCS----HCEMKFKNLKDFKEHMTSV-HLNKRNLRD--DTMYCELTEEEI---- 1156
+P + + ++++D + H+N L ++ L E
Sbjct: 316 QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 1157 -TLNI--DDMHAPNRT--------VESDRE-------KYKLVEGDQVRYKCSDCDKTYTR 1198
L++ H P ++SD KY LVE S +
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI----PSI 431
Query: 1199 FYELKCHLM----VHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEI 1254
+ ELK L +HR + +HY + +
Sbjct: 432 YLELKVKLENEYALHR------------------SIVDHY------NIPKTFDSDDLIPP 467
Query: 1255 CIEGETKYKCPLCPSITSRYDSLQQHMR-LHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
++ Y Y + H++ + E+ + F +
Sbjct: 468 YLDQ---YF----------YSHIGHHLKNIEHPER----------MTLFRMVFLDFRFLE 504
Query: 1314 MKV---GYQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHS- 1369
K+ N G +L LK + K Y+C+ K + + + F
Sbjct: 505 QKIRHDSTAWNASGSILNTLQQLKFY-------KPYICDNDPK-YERLVNAILD-FLPKI 555
Query: 1370 EERSFKCSYC 1379
EE Y
Sbjct: 556 EENLICSKYT 565
Score = 47.2 bits (111), Expect = 7e-05
Identities = 96/681 (14%), Positives = 185/681 (27%), Gaps = 190/681 (27%)
Query: 1596 TERSESSESSKKI---YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKS 1652
E E K I +E + K++ D +S+ L E D H + SK +
Sbjct: 9 FETGEHQYQYKDILSVFEDAFVDN--FDCKDVQDMPKSI---LSKEEID---HIIMSKDA 60
Query: 1653 LDDHYRI-----HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEESFDNCNNLW 1707
+ R+ E+ F + +KF S + ++ + S
Sbjct: 61 VSGTLRLFWTLLSKQEEMV------QKFVEEVLRINYKFLMSPIKTEQRQPSMM------ 108
Query: 1708 SHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNL 1767
+ M+I+ D + N D+++ KY + R + + ++Q + L
Sbjct: 109 TRMYIEQRDR--LYN----DNQVFAKYN--VSRL-QPYLKLRQ-ALL-----------EL 147
Query: 1768 RTH--MVVHSNKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGF-----KCRK 1820
R +++ GK++ D+ + C+ F C
Sbjct: 148 RPAKNVLIDGVLG-----SGKTWVALDVCLSY--------KVQCKMDFKIFWLNLKNCNS 194
Query: 1821 HLLQHYRTHTKPKATNSFSSSKCEESFDNCNNLWSHMFIK-HENSDFVCNLCPPDSKIVI 1879
E + L + SD N I
Sbjct: 195 P----------------------ETVLEMLQKLLYQIDPNWTSRSDHSSN--IKLRIHSI 230
Query: 1880 KYAHLLVRHM--KKHHTMQLSISSV--SKHIKSKTQIFVDGAIRFKCPDCPTILQTFRGL 1935
+ L R + K + L + +V +K A C IL T R
Sbjct: 231 QAE--LRRLLKSKPYENCLLVLLNVQNAKAWN---------AFNLSC----KILLTTRF- 274
Query: 1936 KAHLDIHSGEKDYACHIC----NKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYN 1991
K D S HI + +K + + +D +V +
Sbjct: 275 KQVTDFLSAAT--TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332
Query: 1992 LKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSFCGNTYKN-------- 2043
+ +R W +N + I + Y+
Sbjct: 333 IAESIRDGLATWDN-----------WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 2044 PKSLDSHI---------RNSHTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNL----IPK 2090
P +HI + + + + K S+ + IP
Sbjct: 382 PP--SAHIPTILLSLIWFDVIKSDVMVVVNKLHK---------YSLVEKQPKESTISIPS 430
Query: 2091 CH--SCQKCEESFDNCNNLWSHMFI--KHENSDFVCNLCPPDSKIVIKYVHLLVRHMKKH 2146
+ K E + ++ H I ++ D + D Y H+ H+K
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP--YLDQYF---YSHI-GHHLKN- 483
Query: 2147 HTMQLRISSVSKHIKSKTQIFVD-----GAIHHSCQKCEESFDNCNNLWSHMFIKHENRD 2201
+ + +F+D I H S N L + +
Sbjct: 484 -------IEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL--QQLKFY--KP 532
Query: 2202 FVCNLCPPDSKIMIKYVHFVL 2222
++C+ P +++ + F+
Sbjct: 533 YICDNDPKYERLVNAILDFLP 553
Score = 44.8 bits (105), Expect = 4e-04
Identities = 94/685 (13%), Positives = 193/685 (28%), Gaps = 196/685 (28%)
Query: 48 HKSAGVDL-LTEEELREKSAVEI--DGEIK-FQCPDCHTMMKNFAYLKK----HV----- 94
H +D E + + K + + D + F C D M K+ L K H+
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSI--LSKEEIDHIIMSKD 59
Query: 95 RDNHSGETFSC-----DECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEG 149
+ + F +E + F ++ LR +YK L + I++ E+ T +Y+E
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFV-EEVLRINYKFLMS-PIKT--EQRQPSMMTRMYIEQ 115
Query: 150 V----------VKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCG-AAFGLARRLK 198
KY ++ + LR+ ++ + + +V ++ G G K
Sbjct: 116 RDRLYNDNQVFAKYNVSR----LQPYLKLRQALLEL--RPAKNV-LIDGVLGSG-----K 163
Query: 199 THYIRRHTVNILTQANHDNEDKLDVTKIF-----NVNKEDCQIMQGEKVKFKCPECPRSY 253
T V + ++ + K+D KIF N N + + +K+ +
Sbjct: 164 T------WVALDVCLSYKVQCKMD-FKIFWLNLKNCNSPETVLEMLQKL------LYQID 210
Query: 254 GNFSELKKH-----LAVHTGEKHFVCSVCQRGFFMKNRLNE---------HYKRVHHMNF 299
N++ H L +H+ + R + K + N
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAEL------RRLLKSKPYENCLLVLLNVQNAKAWNAFNL 264
Query: 300 ------TSRDHDLRRETETN-VDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
T+R + T+ + + +L + +P
Sbjct: 265 SCKILLTTRFKQV-----TDFLSAATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDL 318
Query: 353 --EACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCET 410
E + P + I + +D L + K C+
Sbjct: 319 PREVLTTN-PRR-----------------LSIIA------ESIRDGLATWDNWKHVNCD- 353
Query: 411 CGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLK--------VHTSGDVR 462
+ T I + + P ++ H +
Sbjct: 354 --------------KLTTIIESSL-------NVLEPAEYRKMFDRLSVFPPSAHIPTIL- 391
Query: 463 HICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAF 522
+ L+ + V +L +L ++ + L
Sbjct: 392 -LS------------LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKV- 437
Query: 523 NNSQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSIC 582
++ + HR + I + P Y +S H + + ++
Sbjct: 438 -KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY-FYSHIGHHLKNIEHPERM--TLF 493
Query: 583 SKCF----FIKNRLSEHYRRVHKMRVSMART-NDVKKSAEISVDGVTKYKCHICDS--IF 635
F F++ ++ H S+ T +K YK +ICD+ +
Sbjct: 494 RMVFLDFRFLEQKI-RHDSTAWNASGSILNTLQQLK-----------FYKPYICDNDPKY 541
Query: 636 TRYDSLRLH----VRTHTGDRPYTC 656
R + L + + YT
Sbjct: 542 ERLVNAILDFLPKIEENLICSKYTD 566
Score = 41.4 bits (96), Expect = 0.004
Identities = 57/421 (13%), Positives = 124/421 (29%), Gaps = 117/421 (27%)
Query: 9 WIHMFSQHIDETL--------------YCNLCEKSS------ESTIRAPSMLMKHWRRVH 48
W+++ + + ET+ + + + SS S L+K +
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP--Y 243
Query: 49 KSAGVDLLTEEELREKSAVEIDGEIKFQCPDCHTMM-----KNFAYLK----KHVRDNHS 99
++ LL ++ A F C ++ + +L H+ +H
Sbjct: 244 ENC---LLVLLNVQNAKAWN-----AFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 100 GETFSCDE----CSKSFTTK-KCLREHYKKLH---------TIRIRSSREEN----DMKK 141
T + DE K + + L + +IR + +N + K
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 142 KTMVYVEGVVKYKCPECGFMVKRFQGL---REHIVSVHAQVKDHVCIV------------ 186
T + +E + P K F L + + + ++
Sbjct: 355 LTTI-IESSLNVLEPA--EYRKMFDRLSVFPPS-AHIPTIL---LSLIWFDVIKSDVMVV 407
Query: 187 ---CGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKI--FNVNKEDCQIMQGEK 241
+ ++ K I ++ + + +NE L + + +N+ K
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS------ 461
Query: 242 VKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGF----FMKNRLNEHYKRVHHM 297
P Y +S + HL E ++ + F F++ ++ H +
Sbjct: 462 -DDLIPPYLDQY-FYSHIGHHLK--NIEHPERMTLFRMVFLDFRFLEQKI-RHDSTAWNA 516
Query: 298 NFTSRD--HDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEK----PYT 351
+ + + L+ + Y C + P + NA+ L E YT
Sbjct: 517 SGSILNTLQQLKF--------YKPYICDN--DPKYERLVNAI-LDFLPKIEENLICSKYT 565
Query: 352 C 352
Sbjct: 566 D 566
Score = 40.2 bits (93), Expect = 0.009
Identities = 60/433 (13%), Positives = 122/433 (28%), Gaps = 154/433 (35%)
Query: 1892 HHTMQLSISSVSKHIKSKTQIFVDGAIRFKCPDCPTILQTFRGL--KAHLDIHSGEKD-- 1947
HH M K +F D + DC + + + K +D KD
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFV--DNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 1948 ------YACHICNK------VFVRHSTLENH---MKAVHEKIRD-------FQCKVCDRA 1985
+ + +K FV N+ M + + R + + DR
Sbjct: 62 SGTLRLFWT-LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRL 119
Query: 1986 FFDV-----YN---LKLHMRIHTG-----EKKYVC--------------ETC-------G 2011
+ D YN L+ ++++ K V + C
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 2012 ASF-VHWGSLNIHNYSHINA----------QFVCSFCG------NTYKNPKSLDSHIRN- 2053
F + W LN+ N + Q ++ N S+ + +R
Sbjct: 180 MDFKIFW--LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 2054 -SHTNRKKS--ICDDCTKAMSTPAPSSKSVCIEHSNLIPKCHSCQKCEESFD-NC----- 2104
+ + + ++++ +F+ +C
Sbjct: 238 LKSKPYENCLLVLLN----------------VQNAKAW----------NAFNLSCKILLT 271
Query: 2105 -----------NNLWSHMFIKHENSDFVCNLCPPDSK-IVIKYVHL----LVRHMKKHHT 2148
+H+ + H + P + K +++KY+ L R + +
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLT----PDEVKSLLLKYLDCRPQDLPREVLTTNP 327
Query: 2149 MQLRISSVSKHIKSKTQIFVDGAIHHSCQKCEESFDNC-NNL----WSHMFIKHENRDFV 2203
R+S +++ I+ + D H +C K ++ N L + MF
Sbjct: 328 --RRLSIIAESIRDGLATW-DNWKHVNCDKLTTIIESSLNVLEPAEYRKMF-----DRLS 379
Query: 2204 CNLCPPDSKIMIK 2216
+ PP + I
Sbjct: 380 --VFPPSAHIPTI 390
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 60.1 bits (145), Expect = 3e-11
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKV 1335
S + ++H G++ C CG F R L R C C + + L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNK 57
Query: 1336 HMRNHTGEKKY 1346
N +G+K
Sbjct: 58 DEGNESGKKTS 68
Score = 50.8 bits (121), Expect = 6e-08
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 7/67 (10%)
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTL 1389
S + + H G++ C CG F + ++ S ++ C C L
Sbjct: 3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAAL 55
Query: 1390 TEHKKTH 1396
+ +
Sbjct: 56 NKDEGNE 62
Score = 50.0 bits (119), Expect = 1e-07
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
Query: 1934 GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLK 1993
IH G++ C C +F+R STL + C+ C + L
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALN 56
Query: 1994 LHMRIHTGEKKY 2005
+G+K
Sbjct: 57 KDEGNESGKKTS 68
Score = 48.5 bits (115), Expect = 4e-07
Identities = 16/71 (22%), Positives = 22/71 (30%), Gaps = 7/71 (9%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKD 699
S + H GDR C CG F+ + L+R C C +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALNK 57
Query: 700 HLDNHKGEKKY 710
N G+K
Sbjct: 58 DEGNESGKKTS 68
Score = 44.7 bits (105), Expect = 1e-05
Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Query: 336 ALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKD 395
+ + H G++ C CG F + L+ K C C A
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57
Query: 396 HLDSHRGEKKY 406
+ G+K
Sbjct: 58 DEGNESGKKTS 68
Score = 42.7 bits (100), Expect = 4e-05
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Query: 694 STNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTL 753
S + H G++ C CG F+ +S + S+ + C C K L
Sbjct: 3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRS-------TLSRRKTPMCEKCRKDSCQEAAL 55
Query: 754 KEHEQTH 760
+ E
Sbjct: 56 NKDEGNE 62
Score = 40.4 bits (94), Expect = 3e-04
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
Query: 1991 NLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSFCGNTYKNPKSLDSH 2050
+ +IH G++ C CG F+ +L+ +C C +L+
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKD 58
Query: 2051 IRNSHTNRKKS 2061
+ + +K S
Sbjct: 59 EG-NESGKKTS 68
Score = 40.0 bits (93), Expect = 3e-04
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Query: 1649 SKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEESFDNCNNLWS 1708
S S +IH G++ C +CG F + ++L K E KC + L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCE----KCRKDSCQEAALNK 57
Query: 1709 HM 1710
Sbjct: 58 DE 59
Score = 39.6 bits (92), Expect = 5e-04
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Query: 389 NAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKT 448
++ + H G++ C CG F +S+ + +T C C +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAA 54
Query: 449 LKEHLKVHT 457
L + +
Sbjct: 55 LNKDEGNES 63
Score = 39.3 bits (91), Expect = 8e-04
Identities = 9/63 (14%), Positives = 18/63 (28%), Gaps = 8/63 (12%)
Query: 1480 SSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE 1539
+ +C C R + K C+ C + +L+ +G+
Sbjct: 14 LGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALNKDEGNESGK 65
Query: 1540 KKY 1542
K
Sbjct: 66 KTS 68
Score = 39.3 bits (91), Expect = 8e-04
Identities = 9/63 (14%), Positives = 18/63 (28%), Gaps = 8/63 (12%)
Query: 1604 SSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGE 1663
+ +C C R + K C+ C + +L+ +G+
Sbjct: 14 LGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALNKDEGNESGK 65
Query: 1664 KKY 1666
K
Sbjct: 66 KTS 68
Score = 38.9 bits (90), Expect = 0.001
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 1499 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1558
+ Q+ +H + +C CG + + + K +C++C Q A+L
Sbjct: 5 SSGKRQK-IHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALN 56
Query: 1559 YHKFSHSE 1566
+ + S
Sbjct: 57 KDEGNESG 64
Score = 38.9 bits (90), Expect = 0.001
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 8/68 (11%)
Query: 1623 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1682
+ Q+ +H + +C CG + + + K +C++C Q A+L
Sbjct: 5 SSGKRQK-IHLGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALN 56
Query: 1683 YHKFSHSE 1690
+ + S
Sbjct: 57 KDEGNESG 64
Score = 38.5 bits (89), Expect = 0.001
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 1525 SKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHK 1561
S S +IH G++ C +CG F + ++L K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK 38
Score = 37.7 bits (87), Expect = 0.002
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 749 SPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKK 808
S + + ++ H GD C CG F R S + +CE C ++
Sbjct: 2 SSGSSGKRQKIH-LGDRSQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEA 53
Query: 809 SLVRHYKIHKGVNT 822
+L + G T
Sbjct: 54 ALNKDEGNESGKKT 67
Score = 36.9 bits (85), Expect = 0.005
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 1762 ANPGNLRTHMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRK 1820
+ G+ +H +++ C CG F ++ L + +CE C
Sbjct: 1 GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEA 53
Query: 1821 HLLQHYRTHTKPKATNSFS 1839
L + + K + S
Sbjct: 54 ALNKDEGNESGKKTSGPSS 72
Score = 36.6 bits (84), Expect = 0.006
Identities = 13/90 (14%), Positives = 25/90 (27%), Gaps = 26/90 (28%)
Query: 1201 ELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGET 1260
+H G+R+ C+ C F + S L+
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------------------------K 38
Query: 1261 KYKCPLCPSITSRYDSLQQHMRLHTGEKPF 1290
C C + + +L + +G+K
Sbjct: 39 TPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 35.0 bits (80), Expect = 0.019
Identities = 14/95 (14%), Positives = 25/95 (26%), Gaps = 28/95 (29%)
Query: 560 SFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEIS 619
S + + ++H G+R CS C F ++ LS
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR------------------------ 37
Query: 620 VDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPY 654
C C + +L +G +
Sbjct: 38 ----KTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 34.6 bits (79), Expect = 0.031
Identities = 11/73 (15%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 723 SSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNM 782
S + H +R +CS C ++ TL + +C+ C + +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK--------TPMCEKCRKDSCQEAAL 55
Query: 783 LRHTKVHSTERPY 795
+ S ++
Sbjct: 56 NKDEGNESGKKTS 68
Score = 34.6 bits (79), Expect = 0.033
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 29/97 (29%)
Query: 254 GNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETN 313
G+ K +H G++ CS C F ++ L+
Sbjct: 1 GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR----------------------- 37
Query: 314 VDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPY 350
+ C C + AL + + +G+K
Sbjct: 38 ----KTPMCEK--CRKDSCQEAALNKDEGNESGKKTS 68
Score = 33.1 bits (75), Expect = 0.11
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 8/69 (11%)
Query: 445 SPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRR 504
S + + K+H GD C CG F T + +T +CE C +
Sbjct: 2 SSGSSGKRQKIHL-GDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEA 53
Query: 505 SLLRHYTTH 513
+L +
Sbjct: 54 ALNKDEGNE 62
Score = 29.6 bits (66), Expect = 2.1
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 8/52 (15%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
KCS C + R L +T C C K Q + L + + +
Sbjct: 19 QKCSKCGIIFIRRSTLS-------RRKTPMCEKCRKDSCQEAALNKD-EGNE 62
Score = 28.1 bits (62), Expect = 7.1
Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 9/61 (14%)
Query: 235 QIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRV 294
+I G++ KC +C + S + K +C C++ + LN+ +
Sbjct: 11 KIHLGDR-SQKCSKCGIIFIRRST-------LSRRKTPMCEKCRKDSCQEAALNKD-EGN 61
Query: 295 H 295
Sbjct: 62 E 62
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 61.3 bits (148), Expect = 4e-11
Identities = 22/113 (19%), Positives = 32/113 (28%), Gaps = 7/113 (6%)
Query: 1272 SRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH-----MKVGYQCNVCGRV 1326
S S + + + TG F C+ C ++ L H N N
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 1327 LTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYH--KFTHSEERSFKCS 1377
+L +K C CG F H K H ++ S S
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114
Score = 59.8 bits (144), Expect = 1e-10
Identities = 20/109 (18%), Positives = 31/109 (28%), Gaps = 7/109 (6%)
Query: 640 SLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSH-----AGFGYQCNICGRVMSDS 694
S +L+ TG + C C ++ L H N + N
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 695 TNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHH--KFSHSKERMFQCS 741
+ + +K C CG F L H K H ++ S
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114
Score = 57.5 bits (138), Expect = 9e-10
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 16/114 (14%)
Query: 559 TSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEI 618
+S S K + + +G K+ C CS + L+ H M + +D +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH------MNETGHYRDDNHE---- 51
Query: 619 SVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ R SL + C CG SF + + L+ H
Sbjct: 52 ------TDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 55.5 bits (133), Expect = 3e-09
Identities = 24/115 (20%), Positives = 34/115 (29%), Gaps = 17/115 (14%)
Query: 257 SELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDG 316
S K + ++ TG F C C + L H H + + D
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNP------- 57
Query: 317 VRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNK 371
S R +L E +K C CG SF + L+ H K
Sbjct: 58 ----------KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102
Score = 54.8 bits (131), Expect = 7e-09
Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Query: 337 LQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWH-----LGKGYRCHICGSTMSNAA 391
+ + TG + C+ C ++ L H N+ + + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 392 NFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHH 424
+ + +K C CG F L H
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 54.4 bits (130), Expect = 1e-08
Identities = 18/109 (16%), Positives = 29/109 (26%), Gaps = 14/109 (12%)
Query: 1200 YELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGE 1259
K + + G C C ++ + LT H + +
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDD--------------NH 50
Query: 1260 TKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
R SL + +K C CG SF + + L H
Sbjct: 51 ETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 54.4 bits (130), Expect = 1e-08
Identities = 18/93 (19%), Positives = 28/93 (30%), Gaps = 4/93 (4%)
Query: 1935 LKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRD----FQCKVCDRAFFDVY 1990
K + I +G + C C+ + L HM D +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 1991 NLKLHMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+L +K C CG SF L++H
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 53.6 bits (128), Expect = 2e-08
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 6/109 (5%)
Query: 1524 SSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVP 1583
SS S + I TG K+ C+ C A++ L H R+ P
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRD----DNHETDNNNP 57
Query: 1584 NKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVH 1632
+ + ++L E E ++K+ +C C + +++ H
Sbjct: 58 KRWSKPRKRSLL--EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 52.5 bits (125), Expect = 5e-08
Identities = 22/111 (19%), Positives = 32/111 (28%), Gaps = 12/111 (10%)
Query: 1648 SSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRN--------QKCEES 1699
SS S + I TG K+ C+ C A++ L H R+ S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 1700 FDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQ 1750
+L + C C + L HM K Q+
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGH----SFESLQDLSVHMIKTKHYQK 108
Score = 50.9 bits (121), Expect = 2e-07
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Query: 723 SSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQ-THRSGDIKHICDTCG---SEFNT 778
SS + + F+C C Y + L H T D H D
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 779 RKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRH 813
++++L ++ C YC SF+ + L H
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 48.6 bits (115), Expect = 1e-06
Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 26/122 (21%)
Query: 1990 YNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSFCGNTYKNPKSLDS 2049
+ KL+ I TG K+ C+ C A++ L +H
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET---------------------- 42
Query: 2050 HIRNSHTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIPKCHSCQKCEESFDNCNNLWS 2109
H D+ + + +E K C C SF++ +L
Sbjct: 43 ----GHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSV 98
Query: 2110 HM 2111
HM
Sbjct: 99 HM 100
Score = 48.2 bits (114), Expect = 2e-06
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 25/134 (18%)
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTL 1389
S+ K++ TG K+ C+ C + H
Sbjct: 4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE---------------------- 41
Query: 1390 TEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLK-H 1448
T H + + N +++LL + +C C F+ + L H
Sbjct: 42 TGHYRD--DNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Query: 1449 VSASSCHQKVPNKS 1462
+ + +QKV S
Sbjct: 100 MIKTKHYQKVSGPS 113
Score = 47.1 bits (111), Expect = 4e-06
Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 8/111 (7%)
Query: 692 SDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHH-----KFSHSKERMFQCSFCEKK 746
S ++ K + G K+ C+ C + L H + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 747 YMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRH--TKVHSTERPY 795
++L E E + + C CG F + +++ H H +
Sbjct: 62 KPRKRSLLEMEGKEDAQKV-LKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 45.5 bits (107), Expect = 1e-05
Identities = 15/98 (15%), Positives = 23/98 (23%), Gaps = 4/98 (4%)
Query: 1606 KKIYECDICKKQVTNRKNMIDHQRSVHEL----LKPYECDTCGHGLSSKKSLDDHYRIHT 1661
+ C C + H + + K+SL +
Sbjct: 17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76
Query: 1662 GEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEES 1699
+K C CG SF L H + S
Sbjct: 77 AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114
Score = 45.1 bits (106), Expect = 2e-05
Identities = 14/92 (15%), Positives = 22/92 (23%), Gaps = 4/92 (4%)
Query: 1482 KKIYECDICKKQVTNRKNMIDHQRSVHEL----LKPYECDTCGHGLSSKKSLDDHYRIHT 1537
+ C C + H + + K+SL +
Sbjct: 17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76
Query: 1538 GEKKYVCQQCGASFTQWASLFYHKFSHSETRN 1569
+K C CG SF L H +
Sbjct: 77 AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108
Score = 44.4 bits (104), Expect = 3e-05
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Query: 388 SNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFT--HIKDRTYPCTYCERKYQS 445
S+ ++ K + G K+ C+ C + L H H +D + K S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 446 PKTLKEHLKVHTSGDVRHI--CQTCGSEFHTRKNLLTHIRTHN 486
+ L++ D + + C CG F + ++L H+
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 41.7 bits (97), Expect = 3e-04
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 9/96 (9%)
Query: 1968 KAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
++ F+CK C A+ + L +HM TG + + S
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 2028 INAQ-------FVCSFCGNTYKNPKSLDSH-IRNSH 2055
C +CG+++++ + L H I+ H
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105
Score = 41.3 bits (96), Expect = 3e-04
Identities = 15/86 (17%), Positives = 24/86 (27%), Gaps = 6/86 (6%)
Query: 1746 HTMQQRCVCSYCGNSYANPGNLRTHMVVHSNKNHICEICGKSFKKKDL------LREHMI 1799
T + C C +Y L HM + + K+ L E
Sbjct: 14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEG 73
Query: 1800 VHSTLRPFLCEFCNAGFKCRKHLLQH 1825
+ C +C F+ + L H
Sbjct: 74 KEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 39.4 bits (91), Expect = 0.002
Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 6/105 (5%)
Query: 1794 LREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRT--HTKPKATNSFSSSKCEESFDNCN 1851
+ + + + F C+ C+A + L H H + + +++ S
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 1852 NLWSHMFIKHENSDFVCNLCPPDSKIVIKYAHLLVRHMKKHHTMQ 1896
+L + C C + L HM K Q
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGH----SFESLQDLSVHMIKTKHYQ 107
Score = 39.4 bits (91), Expect = 0.002
Identities = 16/136 (11%), Positives = 42/136 (30%), Gaps = 22/136 (16%)
Query: 1413 NTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFT 1472
++ + + I + +C C+A + + + H
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAY------DTLVELTVHMN--------------- 40
Query: 1473 ERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDH 1532
E + + + + + ++++++ + + K +C CGH S + L H
Sbjct: 41 ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK-EDAQKVLKCMYCGHSFESLQDLSVH 99
Query: 1533 YRIHTGEKKYVCQQCG 1548
+K G
Sbjct: 100 MIKTKHYQKVSGPSSG 115
Score = 38.6 bits (89), Expect = 0.003
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 1901 SVSKHIKSKTQIFVDGAIRFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRH 1960
S K IF GA +F+C DC T L H++ +G H + +
Sbjct: 2 SSGSSGKLYGSIFT-GASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKR 59
Query: 1961 STLENH-----MKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+ M+ + + +C C +F + +L +HM
Sbjct: 60 WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 36.7 bits (84), Expect = 0.016
Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 8/90 (8%)
Query: 1629 RSVHELLKPYECDTCGHGLSSKKSLDDHYRI-----HTGEKKYVCQQCGASFTQWASLFY 1683
S+ + C C + L H + S + SL
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLE 70
Query: 1684 HKFSHSETRNQKCE---ESFDNCNNLWSHM 1710
+ + KC SF++ +L HM
Sbjct: 71 MEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Score = 35.5 bits (81), Expect = 0.042
Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 19/124 (15%)
Query: 90 LKKHVRDNHSGETFSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEG 149
K + F C +CS ++ T L H M + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVH-----------------MNETGHYRDDN 49
Query: 150 VVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRR-HTVN 208
+ R + L E AQ K C+ CG +F + L H I+ H
Sbjct: 50 HETDNNNPKRWSKPRKRSLLEMEGKEDAQ-KVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108
Query: 209 ILTQ 212
+
Sbjct: 109 VSGP 112
Score = 34.7 bits (79), Expect = 0.074
Identities = 11/71 (15%), Positives = 17/71 (23%)
Query: 1898 SISSVSKHIKSKTQIFVDGAIRFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVF 1957
++ ++ H+ D R L +K C C F
Sbjct: 31 TLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF 90
Query: 1958 VRHSTLENHMK 1968
L HM
Sbjct: 91 ESLQDLSVHMI 101
Score = 32.0 bits (72), Expect = 0.54
Identities = 9/57 (15%), Positives = 13/57 (22%)
Query: 241 KVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHM 297
S L + +K C C F L+ H + H
Sbjct: 50 HETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY 106
Score = 30.5 bits (68), Expect = 2.0
Identities = 9/57 (15%), Positives = 14/57 (24%)
Query: 70 DGEIKFQCPDCHTMMKNFAYLKKHVRDNHSGETFSCDECSKSFTTKKCLREHYKKLH 126
D L + + + C C SF + + L H K
Sbjct: 48 DNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 30.1 bits (67), Expect = 3.0
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 6/62 (9%)
Query: 1186 RYKCSDCDKTYTRFYELKCHLMVHRGERT------MSCTMCDKSFYQVSRLTEHYKRSHR 1239
R + D + + + E + C C SF + L+ H ++
Sbjct: 46 RDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105
Query: 1240 MK 1241
+
Sbjct: 106 YQ 107
Score = 29.7 bits (66), Expect = 4.2
Identities = 15/134 (11%), Positives = 32/134 (23%), Gaps = 37/134 (27%)
Query: 777 NTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKGVNTNTLPSNDIIKHMRN 836
++ + + + + + C+ C+ ++ L H
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVH----------------------- 38
Query: 837 AHQYDIIQAQDYLIQSTQEIDLPCEMCGELNLFSKYCKEHG-IVCEESDTYKKKTHSCIY 895
+ T N ++ E +K C+Y
Sbjct: 39 -------------MNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY 85
Query: 896 CEESFSDSKFLDAH 909
C SF + L H
Sbjct: 86 CGHSFESLQDLSVH 99
Score = 29.0 bits (64), Expect = 6.2
Identities = 6/57 (10%), Positives = 10/57 (17%)
Query: 547 IKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMR 603
++ C C F LS H + +
Sbjct: 51 ETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ 107
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger,
dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 58.5 bits (142), Expect = 1e-10
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 1258 GETKYKCPL--CPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
Y CP+ C SR D L +H+R+HTG+KPF C++C ++F+ +HL H
Sbjct: 16 KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68
Score = 55.8 bits (135), Expect = 9e-10
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 32/101 (31%)
Query: 1271 TSRYDSLQQHMRLHTGEKPFSCQV--CGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLT 1328
++L ++ +P++C V C + F+ + L RH
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRH-------------------- 40
Query: 1329 DSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHS 1369
+R HTG+K + C IC + F++ H TH+
Sbjct: 41 --------IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 55.0 bits (133), Expect = 2e-09
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 626 YKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
Y C + CD F+R D L H+R HTG +P+ C +C ++F HL H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTH 68
Score = 55.0 bits (133), Expect = 2e-09
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Query: 300 TSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSF 359
++L +R Y CP C F R + L H+ HTG+KP+ C C ++F
Sbjct: 3 PHPMNNLLNYVVP---KMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 360 PLKRRLNAH 368
L H
Sbjct: 60 SRSDHLTTH 68
Score = 50.0 bits (120), Expect = 1e-07
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 1934 GLKAHLDIHSGEKDYACHI--CNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYN 1991
L + + + YAC + C++ F R L H++ +H + FQC++C R F +
Sbjct: 8 NLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDH 64
Query: 1992 LKLHMRIHT 2000
L H+R HT
Sbjct: 65 LTTHIRTHT 73
Score = 48.5 bits (116), Expect = 4e-07
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 1765 GNLRTHMVVHSNKNHIC--EICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHL 1822
NL ++V + + C E C + F + D L H+ +H+ +PF C C F HL
Sbjct: 7 NNLLNYVVPKM-RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65
Query: 1823 LQHYRTHT 1830
H RTHT
Sbjct: 66 TTHIRTHT 73
Score = 48.1 bits (115), Expect = 5e-07
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 1959 RHSTLENHMKAVHEKIRDFQCKV--CDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVH 2016
+ L N++ + + C V CDR F L H+RIHTG+K + C C +F
Sbjct: 5 PMNNLLNYVV-PKMR--PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61
Query: 2017 WGSLNIHNYSH 2027
L H +H
Sbjct: 62 SDHLTTHIRTH 72
Score = 46.1 bits (110), Expect = 2e-06
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 1330 SSNLKVHMRNHTGEKKYVC--EICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPR 1387
+NL ++ + Y C E C + F++ H H+ ++ F+C C F
Sbjct: 6 MNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63
Query: 1388 TLTEHKKTH 1396
LT H +TH
Sbjct: 64 HLTTHIRTH 72
Score = 43.8 bits (104), Expect = 2e-05
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 549 YKCPL--CDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRR 598
Y CP+ CDR ++ E RH +H+G++ + C IC + F + L+ H R
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71
Score = 43.4 bits (103), Expect = 2e-05
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 1512 KPYECD--TCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+PY C +C S L H RIHTG+K + C+ C +F++ L H +H+
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 43.4 bits (103), Expect = 2e-05
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 1636 KPYECD--TCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
+PY C +C S L H RIHTG+K + C+ C +F++ L H +H+
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 43.1 bits (102), Expect = 3e-05
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 244 FKCP--ECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKR 293
+ CP C R + EL +H+ +HTG+K F C +C R F + L H +
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71
Score = 42.3 bits (100), Expect = 6e-05
Identities = 21/93 (22%), Positives = 26/93 (27%), Gaps = 30/93 (32%)
Query: 643 LHVRTHTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDH 700
L RPY C V C + F L RH
Sbjct: 9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI------------------------- 43
Query: 701 LDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHS 733
H G+K + C IC F L H +H+
Sbjct: 44 ---HTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 41.9 bits (99), Expect = 8e-05
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 692 SDSTNFKDHLDNHKGEKKYTC--EICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMS 749
N +++ + Y C E C F L H H+ ++ FQC C + +
Sbjct: 4 HPMNNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR 61
Query: 750 PKTLKEHEQTH 760
L H +TH
Sbjct: 62 SDHLTTHIRTH 72
Score = 40.8 bits (96), Expect = 2e-04
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Query: 396 HLDSHR--GEKKYTC--ETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKE 451
+L ++ + Y C E+C F+ L H H + + C C R + L
Sbjct: 8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67
Query: 452 HLKVHT 457
H++ HT
Sbjct: 68 HIRTHT 73
Score = 40.4 bits (95), Expect = 2e-04
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKR 1236
Y C CD+ ++R EL H+ +H G++ C +C ++F + LT H +
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 71
Score = 40.0 bits (94), Expect = 4e-04
Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 23/86 (26%)
Query: 566 RHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGV 623
V R Y C + C + F + L+ H R H G
Sbjct: 9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI-HT--------------------GQ 47
Query: 624 TKYKCHICDSIFTRYDSLRLHVRTHT 649
++C IC F+R D L H+RTHT
Sbjct: 48 KPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 38.8 bits (91), Expect = 0.001
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 21/80 (26%)
Query: 1208 VHRGERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCP 1265
V R +C + CD+ F + LT H R H G+ ++C
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHI-RIH------------------TGQKPFQCR 53
Query: 1266 LCPSITSRYDSLQQHMRLHT 1285
+C SR D L H+R HT
Sbjct: 54 ICMRNFSRSDHLTTHIRTHT 73
Score = 38.4 bits (90), Expect = 0.001
Identities = 20/100 (20%), Positives = 30/100 (30%), Gaps = 32/100 (32%)
Query: 331 FQRFNALQEHMLSHTGEKPYTC--EACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMS 388
N L ++ +PY C E+C + F S
Sbjct: 3 PHPMNNLLNYV--VPKMRPYACPVESCDRRF----------------------------S 32
Query: 389 NAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
+ H+ H G+K + C C F+ L H TH
Sbjct: 33 RSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 37.7 bits (88), Expect = 0.003
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 1751 RCVCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHS 1802
C C ++ L H+ +H+ K C IC ++F + D L H+ H+
Sbjct: 21 ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 35.4 bits (82), Expect = 0.014
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 772 CGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIH 817
C F+ + RH ++H+ ++P+ C C +F L H + H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 33.4 bits (77), Expect = 0.090
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 26/91 (28%)
Query: 257 SELKKHLAVHTGEKHFVCSV--CQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNV 314
+ L + V + + C V C R F + L H R+H
Sbjct: 7 NNLLNY--VVPKMRPYACPVESCDRRFSRSDELTRHI-RIH------------------- 44
Query: 315 DGVRKYKCPHPGCPSSFQRFNALQEHMLSHT 345
G + ++C C +F R + L H+ +HT
Sbjct: 45 TGQKPFQCRI--CMRNFSRSDHLTTHIRTHT 73
Score = 33.0 bits (76), Expect = 0.12
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 723 SSLHHHKFSHSKERMFQCS--FCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRK 780
++L ++ K R + C C++++ L H + H +G C C F+
Sbjct: 7 NNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIH-TGQKPFQCRICMRNFSRSD 63
Query: 781 NMLRHTKVHS 790
++ H + H+
Sbjct: 64 HLTTHIRTHT 73
Score = 29.6 bits (67), Expect = 2.0
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 784 RHTKVHSTERPYIC--EYCNVSFKEKKSLVRHYKIHKGV 820
V RPY C E C+ F L RH +IH G
Sbjct: 9 LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQ 47
Score = 29.6 bits (67), Expect = 2.0
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 1788 FKKKDLLREHMIVHSTLRPFLC--EFCNAGFKCRKHLLQHYRTHTKPKATNSFSSSKCEE 1845
+ L +++ RP+ C E C+ F L +H R HT K F C
Sbjct: 3 PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQK---PFQCRICMR 57
Query: 1846 SFDNCNNLWSHM 1857
+F ++L +H+
Sbjct: 58 NFSRSDHLTTHI 69
Score = 29.2 bits (66), Expect = 2.9
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 1738 LERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHS 1775
L RH++ H T Q+ C C +++ +L TH+ H+
Sbjct: 37 LTRHIRIH-TGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 28.8 bits (65), Expect = 2.9
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHT 267
G+K F+C C R++ L H+ HT
Sbjct: 46 GQK-PFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 28.4 bits (64), Expect = 4.3
Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 1647 LSSKKSLDDHYRIHTGEKKYVC--QQCGASFTQWASLFYHKFSHSETRNQKCEE---SFD 1701
+ + + + Y C + C F++ L H H+ + +C +F
Sbjct: 1 MEPHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 1702 NCNNLWSHM 1710
++L +H+
Sbjct: 61 RSDHLTTHI 69
Score = 28.4 bits (64), Expect = 5.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 90 LKKHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
L +H+R H+G+ F C C ++F+ L H + HT
Sbjct: 37 LTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTH-IRTHT 73
Score = 27.7 bits (62), Expect = 7.7
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Query: 1381 MTFRCPRTLTEHKKTHVLSDVKHVCN--TCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNA 1438
M L + + C +C ++ L H++IH+ +P QC +C
Sbjct: 1 MEPHPMNNLLNYVVPK---MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 57
Query: 1439 KF 1440
F
Sbjct: 58 NF 59
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 57.1 bits (139), Expect = 2e-10
Identities = 15/67 (22%), Positives = 19/67 (28%), Gaps = 28/67 (41%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
GEKP+ C++CG F LK H+R
Sbjct: 2 SSGSSGGEKPYPCEICGTRF----------------------------RHLQTLKSHLRI 33
Query: 1340 HTGEKKY 1346
HTG
Sbjct: 34 HTGSGPS 40
Score = 47.1 bits (113), Expect = 5e-07
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G++PY C++CG F + L H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S GEKPY CE CG F + L +H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 45.2 bits (108), Expect = 2e-06
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKY 2005
+ C++C F + LK H+RIHTG
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 44.8 bits (107), Expect = 3e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
GEK Y CE CG F H +L H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH 30
Score = 44.8 bits (107), Expect = 3e-06
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
KPY C+ CG ++L H RIHTG
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 44.8 bits (107), Expect = 3e-06
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
KPY C+ CG ++L H RIHTG
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 44.4 bits (106), Expect = 4e-06
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
+ GEK Y CEICG F + H H+
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 41.3 bits (98), Expect = 5e-05
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYT 655
Y C IC + F +L+ H+R HTG P +
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 41.3 bits (98), Expect = 5e-05
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GEK Y C+ CG F +L H H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 41.3 bits (98), Expect = 5e-05
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GEK Y C+ CG F +L H H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFS 1291
GE Y C +C + +L+ H+R+HTG P S
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTY 434
S GEK Y CE CGT F + +L H H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY CE C F+ ++L H +IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 38.6 bits (91), Expect = 5e-04
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
+ GEK Y CEICGT F + +L H H+
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 36.7 bits (86), Expect = 0.002
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYT 351
Y C C + F+ L+ H+ HTG P +
Sbjct: 12 YPCEI--CGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 34.0 bits (79), Expect = 0.022
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK + C C + + LK HL +HTG
Sbjct: 8 GEK-PYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 33.6 bits (78), Expect = 0.033
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ E+ + C C FR +TL H + H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 32.1 bits (74), Expect = 0.090
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GE+ Y C IC F L H R+H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH-LRIH 34
Score = 31.7 bits (73), Expect = 0.14
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
GEK + C +C F L H R+H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSH-LRIH 34
Score = 31.3 bits (72), Expect = 0.20
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
Y C C + LK HL +H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 31.3 bits (72), Expect = 0.22
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+P+ CE C F+ + L H R HT P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39
Score = 30.9 bits (71), Expect = 0.25
Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPY 795
+ G+ + C+ CG+ F + + H ++H+ P
Sbjct: 2 SSGSS-GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 30.2 bits (69), Expect = 0.59
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
GE + C+ C F + L+ H ++HT
Sbjct: 6 SGGEKPYPCEICGTRFRHLQTLKSH-LRIHT 35
Score = 29.8 bits (68), Expect = 0.73
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPF 1807
CEICG F+ L+ H+ +H+ P
Sbjct: 14 CEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 28.2 bits (64), Expect = 2.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 465 CQTCGSEFHTRKNLLTHIRTH 485
C+ CG+ F + L +H+R H
Sbjct: 14 CEICGTRFRHLQTLKSHLRIH 34
Score = 27.1 bits (61), Expect = 6.7
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPH 1431
C CG + + L SH++IH+ P
Sbjct: 14 CEICGTRFRHLQTLKSHLRIHTGSGPS 40
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 19/71 (26%), Positives = 24/71 (33%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+SC VCGK+F S++L H+R
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAF----------------------------VLSAHLNQHLR 33
Query: 1339 NHTGEKKYVCE 1349
HT E
Sbjct: 34 VHTQETLSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY+C+VCGK+FV HLN+H S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45
Score = 47.5 bits (114), Expect = 4e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C +CGK F A H H++E S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 47.1 bits (113), Expect = 6e-07
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY C+ CG L+ H R+HT E
Sbjct: 3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 47.1 bits (113), Expect = 6e-07
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY C+ CG L+ H R+HT E
Sbjct: 3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 43.7 bits (104), Expect = 9e-06
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y+C++C K FV + +L H+R
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSA-----------------------------HLNQHLR 33
Query: 1998 IHTGEKKYVCET 2009
+HT E +
Sbjct: 34 VHTQETLSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 339 EHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY+C CGK+F L LN H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C CG +F A L H H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C CG +F A L H H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 40.2 bits (95), Expect = 2e-04
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C +C L QH+R+HT E
Sbjct: 9 GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG +FV LN H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQH 31
Score = 38.3 bits (90), Expect = 8e-04
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y+C +CG F+ + L+ H H++E + S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 36.7 bits (86), Expect = 0.003
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCD 657
Y C++C F L H+R HT +
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y+C CG F + L H H ++ +
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F L +H ++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37
Score = 34.4 bits (80), Expect = 0.016
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+VC + F + LN+H RVH
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVH 35
Score = 34.4 bits (80), Expect = 0.016
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y C C +F L +H+ HT E +
Sbjct: 13 YSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS 45
Score = 34.0 bits (79), Expect = 0.021
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C C +++ + L +HL VHT E S
Sbjct: 9 GEK-PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 33.6 bits (78), Expect = 0.031
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 1796 EHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F HL QH R HT
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETL 40
Score = 31.7 bits (73), Expect = 0.15
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F ++ +H +VH+ E
Sbjct: 2 SSGSSG-TGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 30.9 bits (71), Expect = 0.26
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y+C++C K F + L++H RVH
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQH-LRVH 35
Score = 30.6 bits (70), Expect = 0.44
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + C+ C F L +H + H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 29.8 bits (68), Expect = 0.74
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y C++C K ++ H R VH +
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPSS 45
Score = 29.8 bits (68), Expect = 0.74
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y C++C K ++ H R VH +
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLR-VHTQETLSGPSS 45
Score = 28.6 bits (65), Expect = 2.0
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCD 1434
CN CG + +L H+++H+
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 27.5 bits (62), Expect = 5.2
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1770 HMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ K + C +CGK+F L +H+ VH+
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 27.5 bits (62), Expect = 5.9
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y C+ C K + L HL VH E +
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 57.3 bits (138), Expect = 5e-10
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 9/75 (12%)
Query: 1283 LHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQ---------CNVCGRVLTDSSNL 1333
+ + + C ++F+ L H H+ Q C G+ L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1334 KVHMRNHTGEKKYVC 1348
H+R HTGEK
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 55.0 bits (132), Expect = 3e-09
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 8/75 (10%)
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVC--------DRAFFDVYNL 1992
I + C++ F L H+ H + VC ++F Y L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1993 KLHMRIHTGEKKYVC 2007
H+R+HTGEK
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 52.3 bits (125), Expect = 4e-08
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 11/92 (11%)
Query: 1201 ELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGET 1260
EL C + + + CD++F + L H H V ++ + +C E
Sbjct: 13 ELSCK-WIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH------VGGPEQNNHVCYWEE- 64
Query: 1261 KYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
CP L H+R+HTGEK
Sbjct: 65 ---CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 51.1 bits (122), Expect = 7e-08
Identities = 18/91 (19%), Positives = 24/91 (26%), Gaps = 19/91 (20%)
Query: 265 VHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPH 324
+ + C R F + L H H + C
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEH----------------VGGPEQNNHVCYW 62
Query: 325 PGCPSSFQRFNA---LQEHMLSHTGEKPYTC 352
CP + F A L H+ HTGEK
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 46.9 bits (111), Expect = 3e-06
Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 21/95 (22%)
Query: 344 HTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCHICGSTMSNAANFKDHLDSHRG 402
+ ++C ++F L H H+G H+C
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC------------------- 60
Query: 403 EKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
C G F K L +H H +++ P +
Sbjct: 61 -YWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 43.8 bits (103), Expect = 3e-05
Identities = 13/92 (14%), Positives = 23/92 (25%), Gaps = 22/92 (23%)
Query: 570 VHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCH 629
+ + C + F + L H H + + C+
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEH-----------------VGGPEQNNHVCY 61
Query: 630 -----ICDSIFTRYDSLRLHVRTHTGDRPYTC 656
F L H+R HTG++
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 42.6 bits (100), Expect = 7e-05
Identities = 15/100 (15%), Positives = 22/100 (22%), Gaps = 29/100 (29%)
Query: 647 THTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKG 706
C ++F L H H G
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG------------------------GPE 54
Query: 707 EKKYTCE-----ICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ + C G F K L +H H+ E+ S
Sbjct: 55 QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 42.6 bits (100), Expect = 8e-05
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 8/74 (10%)
Query: 1479 ESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY--------ECDTCGHGLSSKKSLD 1530
+ ++ C + + ++ H H EC G +K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1531 DHYRIHTGEKKYVC 1544
+H R+HTGEK
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 42.6 bits (100), Expect = 8e-05
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 8/74 (10%)
Query: 1603 ESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY--------ECDTCGHGLSSKKSLD 1654
+ ++ C + + ++ H H EC G +K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1655 DHYRIHTGEKKYVC 1668
+H R+HTGEK
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 41.5 bits (97), Expect = 2e-04
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 10/74 (13%)
Query: 1746 HTMQQRCVCSYCGNSYANPGNLRTHMVVH-----SNKNHICE-----ICGKSFKKKDLLR 1795
Q C +++ L TH+ + NH+C GKSFK K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1796 EHMIVHSTLRPFLC 1809
H+ VH+ +
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 41.5 bits (97), Expect = 2e-04
Identities = 14/95 (14%), Positives = 25/95 (26%), Gaps = 22/95 (23%)
Query: 400 HRGEKKYTCETCGTGFAYKSSLYHH-RFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTS 458
+ ++C F+ L H H+ C +
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE---------------- 63
Query: 459 GDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
C G F + L+ HIR H +++
Sbjct: 64 -----ECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 40.7 bits (95), Expect = 4e-04
Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 8/80 (10%)
Query: 726 HHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTC--------GSEFN 777
K+ + C++ + + L H G + C G F
Sbjct: 14 LSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFK 73
Query: 778 TRKNMLRHTKVHSTERPYIC 797
+ ++ H +VH+ E+
Sbjct: 74 AKYKLVNHIRVHTGEKSGPS 93
Score = 38.8 bits (90), Expect = 0.002
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 8/75 (10%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEH-KKTHVLSDVKHV-------CNTCGNEYNTRKNL 1418
+ S C TF L H HV ++ C G + + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1419 LSHMKIHSTGRPHQC 1433
++H+++H+ +
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 38.8 bits (90), Expect = 0.002
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 9/69 (13%)
Query: 1774 HSNKNHICEICGKSFKKKDLLREHM----IVHSTLRPFLCEF-----CNAGFKCRKHLLQ 1824
+ + + C ++F L H+ + +C + FK + L+
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80
Query: 1825 HYRTHTKPK 1833
H R HT K
Sbjct: 81 HIRVHTGEK 89
Score = 35.7 bits (82), Expect = 0.018
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 9/60 (15%)
Query: 622 GVTKYKCHICDSIFTRYDSLRLHV-RTHTGDRPYTCDVC--------GKSFVAKKHLNRH 672
CD F+ L HV H G VC GKSF AK L H
Sbjct: 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
Score = 34.2 bits (78), Expect = 0.074
Identities = 22/106 (20%), Positives = 26/106 (24%), Gaps = 35/106 (33%)
Query: 175 VHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKIFNVNKEDC 234
+ C F L TH H
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVG--------------------------- 51
Query: 235 QIMQGEKVKFKC--PECPRSYGNFSE---LKKHLAVHTGEKHFVCS 275
E+ C ECPR +F L H+ VHTGEK S
Sbjct: 52 ---GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 33.0 bits (75), Expect = 0.18
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 21/95 (22%)
Query: 1970 VHEKIRDFQCKVCDRAFFDVYNLKLHM-RIHTGEKKYVCETCGASFVHWGSLNIHNYSHI 2028
+ E K CDR F ++ L H+ H G + C +W
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----YWEE--------- 64
Query: 2029 NAQFVCSFCGNTYKNPKSLDSHIRNSHTNRKKSIC 2063
C G ++K L +HIR HT K
Sbjct: 65 -----CPREGKSFKAKYKLVNHIR-VHTGEKSGPS 93
Score = 32.2 bits (73), Expect = 0.35
Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 9/68 (13%)
Query: 1507 VHELLKPYECDTCGHGLSSKKSLDDHY-RIHTGEKKYV--------CQQCGASFTQWASL 1557
+ E +C S+ L H H G + C + G SF L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1558 FYHKFSHS 1565
H H+
Sbjct: 79 VNHIRVHT 86
Score = 32.2 bits (73), Expect = 0.35
Identities = 14/68 (20%), Positives = 20/68 (29%), Gaps = 9/68 (13%)
Query: 1631 VHELLKPYECDTCGHGLSSKKSLDDHY-RIHTGEKKYV--------CQQCGASFTQWASL 1681
+ E +C S+ L H H G + C + G SF L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1682 FYHKFSHS 1689
H H+
Sbjct: 79 VNHIRVHT 86
Score = 31.5 bits (71), Expect = 0.75
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 762 SGDIKHICDTCGSEFNTRKNMLRH-TKVH---STERPYICEY-----CNVSFKEKKSLVR 812
+ +C F+T ++ H T H + ++C + SFK K LV
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80
Query: 813 HYKIHKG 819
H ++H G
Sbjct: 81 HIRVHTG 87
Score = 28.0 bits (62), Expect = 9.6
Identities = 16/106 (15%), Positives = 26/106 (24%), Gaps = 31/106 (29%)
Query: 1535 IHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKAL 1594
I + + C +F+ L H +HV
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTH-------VTMEHV--------------------- 50
Query: 1595 FTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
E + EC K + +++H R VH K
Sbjct: 51 --GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPS 93
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 9e-10
Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGE+P+ C VCGK+F TD SNL H +
Sbjct: 2 SSGSSGTGERPYICTVCGKAF----------------------------TDRSNLIKHQK 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ 1545
+PY C CG + + +L H +IHTGEK
Sbjct: 3 SGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 1e-07
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ 1669
+PY C CG + + +L H +IHTGEK
Sbjct: 3 SGS-SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG+RPY C VCGK+F + +L +H S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45
Score = 46.3 bits (111), Expect = 9e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGE+ Y+C +CGK FT ++ H+ H+ E+ S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGE+ Y+C CG +FT ++L H+ H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGE+ Y+C CG +FT ++L H+ H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 40.9 bits (97), Expect = 8e-05
Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GE+ Y C +C K F S NL H
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRS-----------------------------NLIKHQ 32
Query: 1997 RIHTGEKKYVC 2007
+IHTGEK
Sbjct: 33 KIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGE+PY C CGK+F + L H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH 31
Score = 40.2 bits (95), Expect = 2e-04
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGE+ Y+C CG +F +L H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH 31
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ERPYIC C +F ++ +L++H KIH G
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37
Score = 38.6 bits (91), Expect = 5e-04
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQ 1293
GE Y C +C + +L +H ++HTGEKP
Sbjct: 9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 38.2 bits (90), Expect = 6e-04
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GE+ Y C CG F +S+L H+ H ++
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 8e-04
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GE+ Y C +CG F +S+L H+ H+ E+ S
Sbjct: 7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 9e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C +C FT +L H + HTG++P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.020
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ + C C +++ + S L KH +HTGEK S
Sbjct: 9 GER-PYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.039
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GER Y C++C K F ++ L +H +++H
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35
Score = 33.2 bits (77), Expect = 0.049
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ Y C +C K T+R N+I HQ+ +H KP
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.049
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ Y C +C K T+R N+I HQ+ +H KP
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQK-IHTGEKPSGP 43
Score = 32.8 bits (76), Expect = 0.062
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y C C +F + L +H HTGEKP
Sbjct: 13 YICTV--CGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.073
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ +IC CG F R N+++H K+H+ E+P
Sbjct: 3 SGSSG-TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.084
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE+ ++C+VC + F ++ L +H +++H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35
Score = 31.3 bits (72), Expect = 0.24
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ RP++C C F R +L++H + HT KP
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP 40
Score = 29.0 bits (66), Expect = 1.3
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ER + C+ C F L +H+K H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
++C CG + R NL+ H KIH+ +P
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GER CT+C K+F S L +H ++ H
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIH 35
Score = 27.8 bits (63), Expect = 4.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y C +C + +T S +H ++H+GE+ S
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.6
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y C+ C K +T L H +H GE+
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.0
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G+ +IC CG F R NL+ H + H ++
Sbjct: 3 SGSSGT-GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.3
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C C K+FT + L +H +K+HT
Sbjct: 7 GTGERPYICTVCGKAFTDRSNLIKH-QKIHT 36
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK+F T S L +H +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAF----------------------------TRKSGLHIHQQ 33
Query: 1339 NHTGEKKYVC 1348
+HTGE+
Sbjct: 34 SHTGERHSGP 43
Score = 49.8 bits (120), Expect = 7e-08
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C CG + K L H + HTGE+
Sbjct: 3 SGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 49.8 bits (120), Expect = 7e-08
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C CG + K L H + HTGE+
Sbjct: 3 SGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FT+ + + H+ +H+ ER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C CG +FT+ + L H+ SH
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C CG +FT+ + L H+ SH
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 44.0 bits (105), Expect = 6e-06
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 9/42 (21%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCS 676
+ TG++PY C CGK+F K L+ H S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 42.9 bits (102), Expect = 2e-05
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C FTR L +H ++HTG+R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK+F K L+ H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSHTGERHSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/70 (22%), Positives = 20/70 (28%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C C K F R S L +H +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKS-----------------------------GLHIHQQ 33
Query: 1998 IHTGEKKYVC 2007
HTGE+
Sbjct: 34 SHTGERHSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG +F L+IH SH
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F KS L+ H+ +H +R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 38.3 bits (90), Expect = 7e-04
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F KS LH H+ SH+ ER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C +R L H + HTGE+
Sbjct: 9 GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 35.6 bits (83), Expect = 0.007
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F K L H + H G
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37
Score = 35.2 bits (82), Expect = 0.009
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC +C +++ S L H HTGE+H S
Sbjct: 9 GEK-PYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 34.8 bits (81), Expect = 0.015
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + CS C + F K+ L+ H ++ H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35
Score = 33.6 bits (78), Expect = 0.028
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C +F R + L H SHTGE+ +
Sbjct: 13 YKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPSS 45
Score = 32.9 bits (76), Expect = 0.052
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y CS C K F K+ L H ++ H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35
Score = 32.5 bits (75), Expect = 0.071
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKCSDC K +TR L H H GER +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 30.9 bits (71), Expect = 0.29
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C C K T + + HQ+ H +
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGP 43
Score = 30.9 bits (71), Expect = 0.29
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C C K T + + HQ+ H +
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQ-SHTGERHSGP 43
Score = 30.6 bits (70), Expect = 0.38
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + + H + H+ ER
Sbjct: 3 SGSSG-TGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 30.2 bits (69), Expect = 0.54
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C K+F + S L H ++SH
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSH 35
Score = 29.8 bits (68), Expect = 0.71
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KCS C F L H+++H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C +C K+FT K L H ++ HT
Sbjct: 7 GTGEKPYKCSDCGKAFTRKSGLHIH-QQSHT 36
Score = 28.2 bits (64), Expect = 2.9
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + L H ++HT +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERH 40
Score = 27.9 bits (63), Expect = 4.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + +T S H + H+GER S
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 27.1 bits (61), Expect = 7.4
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG + + L H + H+ R
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 26.7 bits (60), Expect = 9.6
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G+ + C CG F + L H ++H +R
Sbjct: 3 SGSSGT-GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-09
Identities = 21/70 (30%), Positives = 23/70 (32%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C VC KSF S+L VH R
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSF----------------------------RYGSSLTVHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 8e-08
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ 1545
KPY+CD C SL H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 8e-08
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ 1669
KPY+CD C SL H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 1e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C++C K F +S H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY CDVC KSF L H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31
Score = 44.0 bits (105), Expect = 7e-06
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
TGEK Y C C SF +SL H+ H+ +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C C SF +SL H+ H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C +C+K F S +L +H
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGS-----------------------------SLTVHQ 32
Query: 1997 RIHTGEKKYVC 2007
RIHTGEK
Sbjct: 33 RIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 6e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C+ C SF + SL +H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31
Score = 41.3 bits (98), Expect = 6e-05
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C+ C KSF L H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 16/36 (44%), Positives = 18/36 (50%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQ 1293
GE YKC +C SL H R+HTGEKP
Sbjct: 9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C++C F Y SSL H+ H+ E+ S
Sbjct: 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC +C F SL +H R HTG++P
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ C F Y SSL H+ H ++ +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C+ SF+ SL H +IH G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 33.3 bits (77), Expect = 0.040
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC C +S+ S L H +HTGEK S
Sbjct: 9 GEK-PYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.093
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
YKC C SF+ ++L H HTGEKP
Sbjct: 13 YKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC C +FR +LT H++ H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 30.6 bits (70), Expect = 0.37
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C +C K F + L+ H +R+H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIH 35
Score = 30.6 bits (70), Expect = 0.38
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+CD+C K ++ HQR +H KP
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.38
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+CD+C K ++ HQR +H KP
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQR-IHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.41
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + CD C F ++ H ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.58
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C VC + F + L H +R+H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIH 35
Score = 29.8 bits (68), Expect = 0.79
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C+ C+ F+ L H R HT KP
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP 40
Score = 29.8 bits (68), Expect = 0.80
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C +C KSF S LT H +R H
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVH-QRIH 35
Score = 27.9 bits (63), Expect = 3.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + CD C KSF L H +++HT
Sbjct: 7 GTGEKPYKCDVCHKSFRYGSSLTVH-QRIHT 36
Score = 27.5 bits (62), Expect = 4.7
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC C K++ L H +H GE+ +
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.1
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ C + +L H +IH+ +P
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 2e-09
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C +CGKSF T S L VH +
Sbjct: 2 SSGSSGTGEKPYECSICGKSF----------------------------TKKSQLHVHQQ 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 4e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC CG + K L H +IHTGEK
Sbjct: 3 SGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 4e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC CG + K L H +IHTGEK
Sbjct: 3 SGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C ICGK FT+ + + H+ H+ E+ S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C +CGKSF K L+ H S
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45
Score = 45.2 bits (108), Expect = 2e-06
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C CG SFT+ + L H+ H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 45.2 bits (108), Expect = 2e-06
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C CG SFT+ + L H+ H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 42.1 bits (100), Expect = 4e-05
Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C IC K F + S L +H +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKS-----------------------------QLHVHQQ 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 41.8 bits (99), Expect = 5e-05
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGKSF K +L+ H + H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG SF L++H H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C IC FT+ L +H + HTG++P
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C +C ++ L H ++HTGEKP
Sbjct: 9 GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 9e-04
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F KS L+ H+ H ++ +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C ICG F KS LH H+ H+ E+ S
Sbjct: 7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 36.4 bits (85), Expect = 0.003
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C SF +K L H +IH G
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37
Score = 32.5 bits (75), Expect = 0.078
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC IC K T + + HQ+ +H KP
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.078
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC IC K T + + HQ+ +H KP
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQ-IHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.081
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y+C C SF + + L H HTGEKP
Sbjct: 13 YECSI--CGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.092
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y CSIC K F K++L H +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ 33
Score = 32.1 bits (74), Expect = 0.13
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C C +S+ S+L H +HTGEK S
Sbjct: 9 GEK-PYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.21
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + CS+C + F K++L+ H +++H
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIH 35
Score = 30.6 bits (70), Expect = 0.40
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + L H + HT KP
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP 40
Score = 30.2 bits (69), Expect = 0.63
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + + H ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.93
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+CS C K++T+ +L H +H GE+ +
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.95
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++CS C +F L H++ H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 28.3 bits (64), Expect = 2.6
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C++C KSF + S+L H ++ H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIH 35
Score = 26.7 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C C KSFT K L H +++HT
Sbjct: 7 GTGEKPYECSICGKSFTKKSQLHVH-QQIHT 36
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 3e-09
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK+F TD SNL H +
Sbjct: 2 SSGSSGTGEKPYRCAECGKAF----------------------------TDRSNLFTHQK 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 2e-07
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY C CG + + +L H +IHTGEK
Sbjct: 2 SSGS-SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY C CG + + +L H +IHTGEK
Sbjct: 2 SSGS-SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 9e-07
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FT ++ + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 1e-06
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C CGK+F + +L H S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45
Score = 44.8 bits (107), Expect = 4e-06
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG +FT ++LF H+ H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 44.8 bits (107), Expect = 4e-06
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG +FT ++LF H+ H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 18/73 (24%), Positives = 22/73 (30%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F S NL H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRS-----------------------------NLFTHQ 32
Query: 1997 RIHTGEKKYVCET 2009
+IHTGEK +
Sbjct: 33 KIHTGEKPSGPSS 45
Score = 41.0 bits (97), Expect = 8e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK+F + L H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG +F +L H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTH 31
Score = 38.6 bits (91), Expect = 5e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C FT +L H + HTG++P
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F +S+L H+ H+ E+ S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C + +L H ++HTGEKP
Sbjct: 9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GEK Y C CG F +S+L+ H+ H ++
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F ++ +L H KIH G
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 34.4 bits (80), Expect = 0.016
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C EC +++ + S L H +HTGEK S
Sbjct: 9 GEK-PYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.020
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y+C C +F + L H HTGEKP +
Sbjct: 13 YRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSS 45
Score = 33.6 bits (78), Expect = 0.036
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C CG F R N+ H K+H+ E+P
Sbjct: 3 SGSSG-TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C C K T+R N+ HQ+ +H KP
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.13
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C C K T+R N+ HQ+ +H KP
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQK-IHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.21
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F ++ L H +++H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIH 35
Score = 31.3 bits (72), Expect = 0.23
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F ++ L H +++H
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIH 35
Score = 30.2 bits (69), Expect = 0.53
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F R +L H + HT KP
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP 40
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + R NL +H KIH+ +P
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++C+ C F L H+K H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 28.2 bits (64), Expect = 2.4
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S L H ++ H
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIH 35
Score = 27.9 bits (63), Expect = 4.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y+C C + +T S H ++H+GE+ S
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.7
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
T G+ + C CG F R NL TH + H
Sbjct: 3 SGSSGT-GEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 27.5 bits (62), Expect = 4.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C EC K+FT + L H +K+HT
Sbjct: 7 GTGEKPYRCAECGKAFTDRSNLFTH-QKIHT 36
Score = 27.5 bits (62), Expect = 5.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+C++C K +T L H +H GE+
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGKSF S L VH R
Sbjct: 2 SSGSSGTGEKPYECSDCGKSF----------------------------IKKSQLHVHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGE
Sbjct: 34 IHTGENPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC CG K L H RIHTGE
Sbjct: 3 SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC CG K L H RIHTGE
Sbjct: 3 SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 47.2 bits (113), Expect = 6e-07
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C CGKSF+ K L+ H S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45
Score = 46.8 bits (112), Expect = 8e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F + + + H+ H+ E S
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 44.1 bits (105), Expect = 6e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C CG SF + + L H+ H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 44.1 bits (105), Expect = 6e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C CG SF + + L H+ H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGKSF K +L+ H + H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG SF+ L++H H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 41.0 bits (97), Expect = 7e-05
Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F++ S L +H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKS-----------------------------QLHVHQ 32
Query: 1997 RIHTGEKKYVCET 2009
RIHTGE +
Sbjct: 33 RIHTGENPSGPSS 45
Score = 39.1 bits (92), Expect = 4e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F + L +H R HTG+ P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F+ KS LH H+ H+ E S
Sbjct: 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GEK Y C CG F KS L+ H+ H +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C + L H R+HTGE P
Sbjct: 9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C SF +K L H +IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37
Score = 32.9 bits (76), Expect = 0.056
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C +C +S+ S+L H +HTGE S
Sbjct: 9 GEK-PYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 32.9 bits (76), Expect = 0.067
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + Y+C C SF + + L H HTGE P +
Sbjct: 9 GEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS 45
Score = 32.5 bits (75), Expect = 0.070
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y CS C K F K++L H R
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR 33
Score = 31.7 bits (73), Expect = 0.15
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC C K + + HQR +H P
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC C K + + HQR +H P
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQR-IHTGENPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + CS C + F K++L+ H +R+H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIH 35
Score = 31.4 bits (72), Expect = 0.23
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + + H ++H+ E P
Sbjct: 3 SGSSG-TGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 31.0 bits (71), Expect = 0.29
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + L H R HT P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENP 40
Score = 29.8 bits (68), Expect = 0.71
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C KSF + S+L H +R H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIH 35
Score = 29.8 bits (68), Expect = 0.81
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+CSDC K++ + +L H +H GE
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 29.4 bits (67), Expect = 1.2
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++CS C +F L H++ H
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 27.5 bits (62), Expect = 4.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y+C C + + S+ H +H+GE S
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 27.5 bits (62), Expect = 4.5
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ + K + C CGKSF KK L H +H+ P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 27.1 bits (61), Expect = 7.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C +C KSF K L H +++HT
Sbjct: 7 GTGEKPYECSDCGKSFIKKSQLHVH-QRIHT 36
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 53.3 bits (129), Expect = 3e-09
Identities = 13/67 (19%), Positives = 19/67 (28%), Gaps = 28/67 (41%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
GEKP+ C+ CG F ++L+ H+
Sbjct: 2 SSGSSGGEKPYKCETCGARF----------------------------VQVAHLRAHVLI 33
Query: 1340 HTGEKKY 1346
HTG
Sbjct: 34 HTGSGPS 40
Score = 47.1 bits (113), Expect = 5e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G++PY C+ CG FV HL H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH 30
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
KPY+C+TCG L H IHTG
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
KPY+C+TCG L H IHTG
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
+ GEK Y CE CG F Q A H H+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S GEKPY CE CG F L AH
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH 30
Score = 42.9 bits (102), Expect = 1e-05
Identities = 14/68 (20%), Positives = 19/68 (27%), Gaps = 29/68 (42%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
GEK Y C C FV+ + +L+ H+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVA-----------------------------HLRAHVL 32
Query: 1998 IHTGEKKY 2005
IHTG
Sbjct: 33 IHTGSGPS 40
Score = 42.9 bits (102), Expect = 1e-05
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GEK Y C+ CGA F Q A L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 42.9 bits (102), Expect = 1e-05
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GEK Y C+ CGA F Q A L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 42.5 bits (101), Expect = 2e-05
Identities = 15/33 (45%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GEK Y CETCGA FV L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 41.4 bits (98), Expect = 5e-05
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYT 655
YKC C + F + LR HV HTG P +
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFS 1291
GE YKC C + + L+ H+ +HTG P S
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
S GEK Y CETCG F + L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 36.7 bits (86), Expect = 0.003
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY CE C F + L H IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYT 351
YKC C + F + L+ H+L HTG P +
Sbjct: 12 YKCET--CGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 35.6 bits (83), Expect = 0.006
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
+ GEK Y CE CG F+ + L H H+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+P+ CE C A F HL H HT P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39
Score = 34.0 bits (79), Expect = 0.020
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK +KC C + + L+ H+ +HTG
Sbjct: 8 GEK-PYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 31.7 bits (73), Expect = 0.14
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C F QV+ L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH-VLIH 34
Score = 31.7 bits (73), Expect = 0.16
Identities = 9/34 (26%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
GEK + C C F L H +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH-VLIH 34
Score = 31.0 bits (71), Expect = 0.24
Identities = 8/31 (25%), Positives = 9/31 (29%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
GE+ Y C C F L H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32
Score = 30.6 bits (70), Expect = 0.35
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPY 795
+ G+ + C+TCG+ F ++ H +H+ P
Sbjct: 2 SSGSS-GGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 30.6 bits (70), Expect = 0.40
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
YKC C + + L+ H+++H G
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 29.8 bits (68), Expect = 0.64
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ E+ +KC C F L H H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 29.4 bits (67), Expect = 0.96
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
GE + C+ C F LR H +HT
Sbjct: 6 SGGEKPYKCETCGARFVQVAHLRAH-VLIHT 35
Score = 28.3 bits (64), Expect = 2.8
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYT 578
YKC C + + + H +H+G +
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 27.9 bits (63), Expect = 3.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1781 CEICGKSFKKKDLLREHMIVH 1801
CE CG F + LR H+++H
Sbjct: 14 CETCGARFVQVAHLRAHVLIH 34
Score = 27.1 bits (61), Expect = 6.5
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
G+ + C+TCG+ F +L H+ H
Sbjct: 2 SSGSSG-GEKPYKCETCGARFVQVAHLRAHVLIH 34
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKPF C +CGKSF S L H
Sbjct: 3 SGSSGTGEKPFKCDICGKSF----------------------------CGRSRLNRHSMV 34
Query: 1340 HTGEKKYVCE 1349
HT EK
Sbjct: 35 HTAEKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C+ICGK F + H H+ E+ S
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++CD CG + L+ H +HT EK
Sbjct: 3 SGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++CD CG + L+ H +HT EK
Sbjct: 3 SGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++P+ CD+CGKSF + LNRH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH 31
Score = 43.6 bits (104), Expect = 9e-06
Identities = 15/73 (20%), Positives = 20/73 (27%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK + C IC K F S L H
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRS-----------------------------RLNRHS 32
Query: 1997 RIHTGEKKYVCET 2009
+HT EK +
Sbjct: 33 MVHTAEKPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C CG SF + L H H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C CG SF + L H H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP+ C+ CGKSF + RLN H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH 31
Score = 41.3 bits (98), Expect = 6e-05
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C+ CG SF LN H+ H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC +C L +H +HT EKP
Sbjct: 9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C+ICG F +S L+ H H+ E+ S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCD 657
+KC IC F L H HT ++P
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C+ CG F +S L H H ++ +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.003
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C+ C SF + L RH +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37
Score = 35.2 bits (82), Expect = 0.009
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK FKC C +S+ S L +H VHT EK S
Sbjct: 9 GEK-PFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.013
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C SF + L H + HT EKP +
Sbjct: 13 FKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSS 45
Score = 34.0 bits (79), Expect = 0.021
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ CD CG F R + RH+ VH+ E+P
Sbjct: 3 SGSSG-TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.044
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F C +C + F ++RLN H VH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35
Score = 32.1 bits (74), Expect = 0.10
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K ++CDIC K R + H VH KP +
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.10
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K ++CDIC K R + H VH KP +
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSM-VHTAEKPSGPSS 45
Score = 31.3 bits (72), Expect = 0.20
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ + C IC K F ++RL+ H VH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35
Score = 31.3 bits (72), Expect = 0.22
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C+ C F R L +H HT KP
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP 40
Score = 30.9 bits (71), Expect = 0.32
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ FKC C +F L H H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 30.5 bits (70), Expect = 0.40
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C +C KSF SRL H H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRH-SMVH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K C+ICGKSF + L H +VH+ +P
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCD 1434
C+ CG + R L H +H+ +P
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE F CD C KSF + L H +HT
Sbjct: 7 GTGEKPFKCDICGKSFCGRSRLNRH-SMVHT 36
Score = 28.2 bits (64), Expect = 2.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC C K++ L H MVH E+ +
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 27.5 bits (62), Expect = 5.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+KC +C + + S RH VH+ E+ S
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 26.7 bits (60), Expect = 8.5
Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 1/43 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCE 494
T G+ C CG F R L H H ++
Sbjct: 3 SGSSGT-GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 3e-09
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKPF C CGK+F +D L H R
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAF----------------------------SDHIGLNQHRR 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++C CG S L+ H RIHTGEK
Sbjct: 3 SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++C CG S L+ H RIHTGEK
Sbjct: 3 SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 1e-06
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++P+ C CGK+F LN+H S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C CGK F+ H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 7e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C CG +F+ L H+ H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 44.0 bits (105), Expect = 7e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C CG +F+ L H+ H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 17/73 (23%), Positives = 21/73 (28%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK + C C K F H L H
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHI-----------------------------GLNQHR 32
Query: 1997 RIHTGEKKYVCET 2009
RIHTGEK +
Sbjct: 33 RIHTGEKPSGPSS 45
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP+ C CGK+F LN H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQH 31
Score = 39.8 bits (94), Expect = 2e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE + C C S + L QH R+HTGEKP
Sbjct: 9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C CG +F LN H H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+ C C F+ + L H R HTG++P
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C CG F+ L HR H ++ +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C CG F L+ H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.011
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C C +F + L +H +IH G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37
Score = 34.4 bits (80), Expect = 0.017
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F C +C +++ + L +H +HTGEK S
Sbjct: 9 GEK-PFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.020
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+ C C +F L +H HTGEKP +
Sbjct: 13 FDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.18
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F C C + F LN+H +R+H
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35
Score = 31.3 bits (72), Expect = 0.20
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C C F L QH R HT KP
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP 40
Score = 31.3 bits (72), Expect = 0.23
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ C CG F+ + +H ++H+ E+P
Sbjct: 3 SGSSG-TGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.27
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ F C C F L +H++ H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 30.2 bits (69), Expect = 0.59
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K ++C C K ++ + H+R +H KP
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.59
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K ++C C K ++ + H+R +H KP
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRR-IHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.65
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ + C C K F L++H RR+H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35
Score = 29.4 bits (67), Expect = 1.2
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F L +H +R H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIH 35
Score = 27.5 bits (62), Expect = 4.4
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG ++ L H +IH+ +P
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.9
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 92 KHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ +GE F C +C K+F+ L +H +++HT
Sbjct: 2 SSGS-SGTGEKPFDCIDCGKAFSDHIGLNQH-RRIHT 36
Score = 27.1 bits (61), Expect = 7.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+ C DC K ++ L H +H GE+ +
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Length = 46
Score = 53.3 bits (129), Expect = 4e-09
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKPF C CGKSF + SS L H R
Sbjct: 3 SGSSGTGEKPFECAECGKSF----------------------------SISSQLATHQRI 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 6e-08
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP+EC CG S L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 6e-08
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP+EC CG S L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++P+ C CGKSF L H S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45
Score = 44.0 bits (105), Expect = 6e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C CGK F+ + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C +CG SF+ + L H+ H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C +CG SF+ + L H+ H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/72 (23%), Positives = 20/72 (27%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK + C C K F S L H R
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISS-----------------------------QLATHQR 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP+ C CGKSF + +L H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK + C CG SF L H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATH 31
Score = 38.6 bits (91), Expect = 5e-04
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE ++C C S L H R+HTGEKP
Sbjct: 9 GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C C SF L H +IH G
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C F+ L H R HTG++P
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C CG F+ S L H+ H ++ +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK + C CG F S L H+ H+ E+ S
Sbjct: 7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.015
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F+C EC +S+ S+L H +HTGEK S
Sbjct: 9 GEK-PFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.023
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
++C C SF + L H HTGEKP +
Sbjct: 13 FECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.10
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ + C+ C K F I ++L+ H +R+H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATH-QRIH 35
Score = 30.9 bits (71), Expect = 0.29
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F C+ C + F + ++L H +R+H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATH-QRIH 35
Score = 30.9 bits (71), Expect = 0.30
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C C F L H R HT KP
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKP 40
Score = 30.9 bits (71), Expect = 0.33
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K +EC C K + + HQR +H KP
Sbjct: 11 KPFECAECGKSFSISSQLATHQR-IHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.33
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K +EC C K + + HQR +H KP
Sbjct: 11 KPFECAECGKSFSISSQLATHQR-IHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.57
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ C CG F+ + H ++H+ E+P
Sbjct: 3 SGSSG-TGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.97
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ F+C+ C +F L H++ H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 28.2 bits (64), Expect = 2.6
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C KSF S+L H +R H
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATH-QRIH 35
Score = 27.1 bits (61), Expect = 7.0
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
++C++C K+++ +L H +H GE+ +
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 8.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 92 KHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ +GE F C EC KSF+ L H +++HT
Sbjct: 2 SSGS-SGTGEKPFECAECGKSFSISSQLATH-QRIHT 36
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 53.3 bits (129), Expect = 4e-09
Identities = 18/74 (24%), Positives = 23/74 (31%), Gaps = 29/74 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+GEKPF C+ CGK F +S H R
Sbjct: 2 SSGSSGSGEKPFKCEECGKGF----------------------------YTNSQCYSHQR 33
Query: 1339 NHTGEKKYVCEICG 1352
+H+GEK G
Sbjct: 34 SHSGEKPSGPS-SG 46
Score = 49.9 bits (120), Expect = 5e-08
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCG 1548
KP++C+ CG G + H R H+GEK G
Sbjct: 3 SGS-SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46
Score = 49.9 bits (120), Expect = 5e-08
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCG 1672
KP++C+ CG G + H R H+GEK G
Sbjct: 3 SGS-SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46
Score = 46.4 bits (111), Expect = 1e-06
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK + CE CGKGF + Y H+ +HS E+ S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 43.7 bits (104), Expect = 8e-06
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++P+ C+ CGK F H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GEK + C++CG F + + H+ SHS
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
+GEK + C++CG F + + H+ SHS
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36
Score = 43.3 bits (103), Expect = 1e-05
Identities = 16/75 (21%), Positives = 20/75 (26%), Gaps = 30/75 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SGEK + C C K F +S H
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNS-----------------------------QCYSHQ 32
Query: 1997 RIHTGEKKYVCETCG 2011
R H+GEK G
Sbjct: 33 RSHSGEKPSGPS-SG 46
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GEKP+ CE CGK F + +H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH 31
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK + CE CG F H SH
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 39.5 bits (93), Expect = 2e-04
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + CE CG GF S Y H+ +H ++ +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 39.5 bits (93), Expect = 3e-04
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCG 660
+KC C F H R+H+G++P G
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 39.5 bits (93), Expect = 3e-04
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCG 1296
GE +KC C H R H+GEKP G
Sbjct: 9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 39.1 bits (92), Expect = 3e-04
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK + CE CG GF S + H+ SHS E+ S
Sbjct: 7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.004
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK FKC EC + + S+ H H+GEK S
Sbjct: 9 GEK-PFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C F + H SH+GEKP +
Sbjct: 13 FKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSS 45
Score = 35.2 bits (82), Expect = 0.008
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+P+ CE C F H + H G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 33.3 bits (77), Expect = 0.042
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ SG+ C+ CG F T H + HS E+P
Sbjct: 3 SGSSG-SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.075
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +PF CE C GF H R+H+ KP
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP 40
Score = 31.4 bits (72), Expect = 0.18
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK F C C +GF+ ++ H +R H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35
Score = 31.0 bits (71), Expect = 0.32
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1520
K ++C+ C K HQR H KP + G
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGP-SSG 46
Score = 31.0 bits (71), Expect = 0.32
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1644
K ++C+ C K HQR H KP + G
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQR-SHSGEKPSGP-SSG 46
Score = 30.6 bits (70), Expect = 0.38
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ + C C K F+ ++ H +R H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35
Score = 29.8 bits (68), Expect = 0.74
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ FKC C F H+++H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 29.1 bits (66), Expect = 1.6
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K FY S+ H +RSH
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSH 35
Score = 28.3 bits (64), Expect = 2.4
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCE 494
+ G+ C+ CG F+T +H R+H+ ++
Sbjct: 3 SGSSGS-GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 28.3 bits (64), Expect = 2.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE F C+EC K F T H ++ H+
Sbjct: 7 GSGEKPFKCEECGKGFYTNSQCYSH-QRSHS 36
Score = 27.5 bits (62), Expect = 5.3
Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ S K CE CGK F H HS +P
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 27.5 bits (62), Expect = 5.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+KC C + + + S+ H HSGE+ S
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.1
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCD 1434
C CG + T SH + HS +P
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.9
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC +C K + + H H GE+ +
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.3 bits (129), Expect = 4e-09
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK+F SNL H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAF----------------------------RAHSNLTTHQV 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 5e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + +L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + +L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 5e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F ++ H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 19/72 (26%), Positives = 22/72 (30%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C K F HS NL H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHS-----------------------------NLTTHQ 32
Query: 1997 RIHTGEKKYVCE 2008
IHTGEK
Sbjct: 33 VIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG +F ++L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG +F ++L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ CGK+F A +L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK+F L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG +F +L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + +L H +HTGEKP
Sbjct: 9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S+L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C F + +L H HTG++P
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.004
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F S+L H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F+ +L H IH G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 34.4 bits (80), Expect = 0.015
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C +F+ + L H + HTGEKP +
Sbjct: 13 YKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPSS 45
Score = 34.4 bits (80), Expect = 0.018
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC +++ S L H +HTGEK S
Sbjct: 9 GEK-PYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.15
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F N+ H +H+ E+P
Sbjct: 3 SGSSG-TGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.20
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F+ +L H HT KP
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKP 40
Score = 30.2 bits (69), Expect = 0.59
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F + L H + +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIH 35
Score = 29.8 bits (68), Expect = 0.77
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S LT H + H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K N+ HQ +H KP
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K N+ HQ +H KP
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQV-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + NL +H IH+ +P
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F + L+ H + +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIH 35
Score = 27.1 bits (61), Expect = 6.7
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C+EC K+F L H + +HT
Sbjct: 7 GTGEKPYKCNECGKAFRAHSNLTTH-QVIHT 36
Score = 27.1 bits (61), Expect = 7.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K + L H ++H GE+ +
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 8.4
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K + C CGK+F+ L H ++H+ +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 4e-09
Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C VCGK+F + +L VH R
Sbjct: 2 SSGSSGTGEKPYECSVCGKAF----------------------------SHRQSLSVHQR 33
Query: 1339 NHTGEKKYVCE 1349
H+G+K
Sbjct: 34 IHSGKKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC CG S ++SL H RIH+G+K
Sbjct: 3 SGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC CG S ++SL H RIH+G+K
Sbjct: 3 SGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 47.1 bits (113), Expect = 6e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C +CGK F+ S H+ HS ++ S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
TGEK Y C CG +F+ SL H+ HS
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
TGEK Y C CG +F+ SL H+ HS
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36
Score = 44.8 bits (107), Expect = 4e-06
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 9/44 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSHA 678
+ TG++PY C VCGK+F ++ L+ H S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG 46
Score = 42.1 bits (100), Expect = 3e-05
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG +F H SL++H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVH 31
Score = 41.7 bits (99), Expect = 4e-05
Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C +C K F +L +H R
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQ-----------------------------SLSVHQR 33
Query: 1998 IHTGEKKYVCET 2009
IH+G+K +
Sbjct: 34 IHSGKKPSGPSS 45
Score = 40.6 bits (96), Expect = 1e-04
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK+F ++ L+ H + H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C +C S SL H R+H+G+KP
Sbjct: 9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 38.6 bits (91), Expect = 5e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C +C F+ SL +H R H+G +P
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F+++ SL H+ H + +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C +CG F ++ SL H+ HS ++ S
Sbjct: 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 35.9 bits (84), Expect = 0.006
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F ++SL H +IH G
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37
Score = 33.3 bits (77), Expect = 0.048
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y+C C +F +L H H+G+KP +
Sbjct: 13 YECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSS 45
Score = 32.5 bits (75), Expect = 0.095
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C C +++ + L H +H+G+K S
Sbjct: 9 GEK-PYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC +C K ++R+++ HQR +H KP
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC +C K ++R+++ HQR +H KP
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQR-IHSGKKPSGP 43
Score = 30.9 bits (71), Expect = 0.32
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y CS+C K F + LS H R
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33
Score = 30.6 bits (70), Expect = 0.42
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + CSVC + F + L+ H +R+H
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVH-QRIH 35
Score = 29.8 bits (68), Expect = 0.77
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F R+ L H R H+ KP
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40
Score = 29.8 bits (68), Expect = 0.84
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
C CG F+ R+++ H ++HS ++P
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 28.6 bits (65), Expect = 1.7
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++CS C F ++L+ H++ H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 28.2 bits (64), Expect = 2.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C++C K+F L+ H +R H
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVH-QRIH 35
Score = 28.2 bits (64), Expect = 2.7
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+CS C K ++ L H +H G++ +
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 27.5 bits (62), Expect = 5.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG ++ R++L H +IHS +P
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 52.9 bits (128), Expect = 4e-09
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C C K+F SNL VH R
Sbjct: 3 SGSSGTGEKPYECNECQKAF----------------------------NTKSNLMVHQRT 34
Query: 1340 HTGEKKYVC 1348
HTGE
Sbjct: 35 HTGESGPSS 43
Score = 49.4 bits (119), Expect = 7e-08
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC+ C ++K +L H R HTGE
Sbjct: 3 SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 49.4 bits (119), Expect = 7e-08
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC+ C ++K +L H R HTGE
Sbjct: 3 SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+ TGEK Y C C K F ++ H+ TH+ E
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 44.0 bits (105), Expect = 6e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +C +F ++L H+ +H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 44.0 bits (105), Expect = 6e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +C +F ++L H+ +H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 43.2 bits (103), Expect = 1e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ C K+F K +L H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 17/71 (23%), Positives = 21/71 (29%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C K F S NL +H
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKS-----------------------------NLMVHQ 32
Query: 1997 RIHTGEKKYVC 2007
R HTGE
Sbjct: 33 RTHTGESGPSS 43
Score = 41.3 bits (98), Expect = 6e-05
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C C K+F K L H + H G G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTHTGESGPSS 43
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C C +F +L +H +H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C+ C F +L +H RTHTG+ +
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C + +L H R HTGE S
Sbjct: 9 GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 38.6 bits (91), Expect = 6e-04
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GEK Y C C F KS+L H+ TH +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
+ GEK Y C C F KS+L H+ +H+ E
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 34.8 bits (81), Expect = 0.012
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F K +L+ H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 32.8 bits (76), Expect = 0.064
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y+C C +F + L H +HTGE +
Sbjct: 13 YECNE--CQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 32.5 bits (75), Expect = 0.082
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC+ C+K + N++ HQR H
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQR-THTGESGPSS 43
Score = 32.5 bits (75), Expect = 0.082
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC+ C+K + N++ HQR H
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQR-THTGESGPSS 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++C+ C F L H++TH
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 31.3 bits (72), Expect = 0.18
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVC 274
GEK ++C EC +++ S L H HTGE
Sbjct: 9 GEK-PYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.9 bits (71), Expect = 0.25
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ CQ+ F K+ L H +R H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTH 35
Score = 30.9 bits (71), Expect = 0.27
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C+ C FNT+ N++ H + H+ E
Sbjct: 3 SGSSG-TGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 29.8 bits (68), Expect = 0.69
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + +L+ H RTHT
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG 40
Score = 29.4 bits (67), Expect = 1.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN C +NT+ NL+ H + H+
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F K+ L H +R H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTH 35
Score = 28.6 bits (65), Expect = 1.9
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S L H +R+H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTH 35
Score = 27.4 bits (62), Expect = 5.4
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
T G+ + C C F+T+ NL+ H RTH
Sbjct: 3 SGSSGT-GEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 27.4 bits (62), Expect = 5.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C+EC K+F TK L H ++ HT
Sbjct: 7 GTGEKPYECNECQKAFNTKSNLMVH-QRTHT 36
Score = 26.7 bits (60), Expect = 9.1
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+C++C K + L H H GE S
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 52.9 bits (128), Expect = 5e-09
Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TG++P+ C CGK+F S+L H R
Sbjct: 2 SSGSSGTGQRPYECIECGKAF----------------------------KTKSSLICHRR 33
Query: 1339 NHTGEKKYVC 1348
+HTGEK
Sbjct: 34 SHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+PYEC CG +K SL H R HTGEK
Sbjct: 3 SGS-SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+PYEC CG +K SL H R HTGEK
Sbjct: 3 SGS-SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 6e-07
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG++ Y C CGK F +S H+ +H+ E+ S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 6e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
TG++ Y C +CG +F +SL H+ SH+ +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45
Score = 46.0 bits (110), Expect = 2e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG++ Y C +CG +F +SL H+ SH
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG RPY C CGK+F K L H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICH 31
Score = 41.4 bits (98), Expect = 6e-05
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G++ Y C CG F KSSL HR +H ++ +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 1e-04
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TG++PY C CGK+F K L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG++ Y C CG +F SL H SH
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 40.2 bits (95), Expect = 2e-04
Identities = 15/70 (21%), Positives = 19/70 (27%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+G++ Y C C K F S +L H R
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKS-----------------------------SLICHRR 33
Query: 1998 IHTGEKKYVC 2007
HTGEK
Sbjct: 34 SHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G+ Y+C C SL H R HTGEKP
Sbjct: 9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ +RPY C C +FK K SL+ H + H G
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37
Score = 39.1 bits (92), Expect = 4e-04
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ G++ Y C CG F KSSL H+ SH+ E+ S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F SL H R+HTG++P
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.028
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G++ ++C EC +++ S L H HTGEK S
Sbjct: 9 GQR-PYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.032
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
G R Y+C C +F+ ++L H SHTGEKP
Sbjct: 9 GQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.064
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G+R Y C C K F K+ L H RR H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35
Score = 32.1 bits (74), Expect = 0.12
Identities = 7/33 (21%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + +R ++C C F+ +L H+++H
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 32.1 bits (74), Expect = 0.12
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ RP+ C C FK + L+ H R+HT KP
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKP 40
Score = 31.7 bits (73), Expect = 0.13
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG++ + C C + F K+ L H +R H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35
Score = 31.4 bits (72), Expect = 0.23
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G + C CG F T+ +++ H + H+ E+P
Sbjct: 3 SGSSG-TGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.30
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ YEC C K + ++I H+R H KP
Sbjct: 11 RPYECIECGKAFKTKSSLICHRR-SHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.30
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ YEC C K + ++I H+R H KP
Sbjct: 11 RPYECIECGKAFKTKSSLICHRR-SHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.55
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G+R C C K+F S L H +RSH
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICH-RRSH 35
Score = 28.3 bits (64), Expect = 2.7
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+C +C K + L CH H GE+ +
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.3
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + T+ +L+ H + H+ +P
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.3
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G + C CG F T+ +L+ H R+H ++
Sbjct: 3 SGSSGT-GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 8.0
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G+ + C EC K+F TK L H ++ HT
Sbjct: 7 GTGQRPYECIECGKAFKTKSSLICH-RRSHT 36
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 52.9 bits (128), Expect = 5e-09
Identities = 17/69 (24%), Positives = 20/69 (28%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TG KP+ C CGK+F S L +H R
Sbjct: 3 SGSSGTGMKPYVCNECGKAF----------------------------RSKSYLIIHTRT 34
Query: 1340 HTGEKKYVC 1348
HTGE
Sbjct: 35 HTGESGPSS 43
Score = 50.2 bits (121), Expect = 5e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S +KPY C+ CG SK L H R HTGE
Sbjct: 3 SGSS-GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 50.2 bits (121), Expect = 5e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S +KPY C+ CG SK L H R HTGE
Sbjct: 3 SGSS-GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+ TG K YVC CGK F + H TH+ E
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 44.4 bits (106), Expect = 5e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG K YVC +CG +F + L H +H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 44.4 bits (106), Expect = 5e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TG K YVC +CG +F + L H +H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 43.6 bits (104), Expect = 9e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG +PY C+ CGK+F +K +L H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIH 31
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/71 (21%), Positives = 19/71 (26%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G K Y C+ C K F S L +H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKS-----------------------------YLIIHT 32
Query: 1997 RIHTGEKKYVC 2007
R HTGE
Sbjct: 33 RTHTGESGPSS 43
Score = 41.7 bits (99), Expect = 5e-05
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TG KPY C CGK+F K L H + H G G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTHTGESGPSS 43
Score = 40.5 bits (96), Expect = 1e-04
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG K YVC CG +F L IH +H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 38.2 bits (90), Expect = 7e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C+ C F L +H RTHTG+ +
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 38.2 bits (90), Expect = 8e-04
Identities = 12/35 (34%), Positives = 12/35 (34%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G Y C C L H R HTGE S
Sbjct: 9 GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/41 (34%), Positives = 15/41 (36%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S G K Y C CG F KS L H TH +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.5 bits (83), Expect = 0.006
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
+ G K Y C CG F KS L H +H+ E
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 35.5 bits (83), Expect = 0.006
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ +PY+C C +F+ K L+ H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 33.6 bits (78), Expect = 0.035
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y C C +F+ + L H +HTGE +
Sbjct: 13 YVCNE--CGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 32.8 bits (76), Expect = 0.053
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG K +VC+ C + F K+ L H R H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTH 35
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVC 274
G K + C EC +++ + S L H HTGE
Sbjct: 9 GMK-PYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 30.9 bits (71), Expect = 0.30
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G ++C+ CG F ++ ++ HT+ H+ E
Sbjct: 3 SGSSG-TGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 30.5 bits (70), Expect = 0.44
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + + + C+ C FR L H +TH
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 30.5 bits (70), Expect = 0.45
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ ++P++C C F+ + +L+ H RTHT
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG 40
Score = 29.8 bits (68), Expect = 0.71
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+G + Y C+ C K F K+ L H R
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR 33
Score = 29.4 bits (67), Expect = 0.91
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C+ C K ++ +I H R H
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS 43
Score = 29.4 bits (67), Expect = 0.91
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C+ C K ++ +I H R H
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTR-THTGESGPSS 43
Score = 28.2 bits (64), Expect = 2.7
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G + C C K+F S L H R+H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIH-TRTH 35
Score = 27.4 bits (62), Expect = 4.4
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G ++C CG F ++ L+ H RTH +
Sbjct: 3 SGSSGT-GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 27.4 bits (62), Expect = 5.4
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
+VCN CG + ++ L+ H + H+
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 27.4 bits (62), Expect = 5.4
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 92 KHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ +G + C+EC K+F +K L H + HT
Sbjct: 2 SSGS-SGTGMKPYVCNECGKAFRSKSYLIIH-TRTHT 36
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.9 bits (128), Expect = 6e-09
Identities = 15/70 (21%), Positives = 20/70 (28%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+ EKP+ C+ CGK + NL +H R
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGY----------------------------NRRLNLDMHQR 33
Query: 1339 NHTGEKKYVC 1348
H GEK
Sbjct: 34 VHMGEKTSGP 43
Score = 49.4 bits (119), Expect = 8e-08
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+ KPY+C+ CG G + + +LD H R+H GEK
Sbjct: 3 SGS-SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 49.4 bits (119), Expect = 8e-08
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+ KPY+C+ CG G + + +LD H R+H GEK
Sbjct: 3 SGS-SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ + EK Y CE CGKG+ + + H+ H E++ S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 44.0 bits (105), Expect = 6e-06
Identities = 16/73 (21%), Positives = 21/73 (28%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ S EK Y C C K + R NL +H
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRL-----------------------------NLDMHQ 32
Query: 1997 RIHTGEKKYVCET 2009
R+H GEK +
Sbjct: 33 RVHMGEKTSGPSS 45
Score = 43.6 bits (104), Expect = 8e-06
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ + ++PY C+ CGK + + +L+ H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31
Score = 42.5 bits (101), Expect = 2e-05
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+ EK Y C+ CG + + +L H+ H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+ EK Y C+ CG + + +L H+ H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 41.7 bits (99), Expect = 5e-05
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S + EKPY CE CGK + + L+ H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31
Score = 40.2 bits (95), Expect = 2e-04
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+ EK Y CE CG + +L++H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C + R +L +H R H G++
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
EK Y CE CG G+ + +L H+ H E+ S
Sbjct: 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 39.0 bits (92), Expect = 5e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
E YKC C +R +L H R+H GEK
Sbjct: 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 38.6 bits (91), Expect = 6e-04
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S EK Y CE CG G+ + +L H+ H+ ++T +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 38.2 bits (90), Expect = 7e-04
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY CE C + + +L H ++H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 36.3 bits (85), Expect = 0.004
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
EK +KC +C + Y L H VH GEK S
Sbjct: 9 VEK-PYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 34.4 bits (80), Expect = 0.019
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ + EK + C C +G+ + L+ H +RVH
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35
Score = 34.0 bits (79), Expect = 0.023
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ S + + C+ CG +N R N+ H +VH E+
Sbjct: 3 SGSSG-SVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 33.6 bits (78), Expect = 0.029
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C + R L H H GEK +
Sbjct: 13 YKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSS 45
Score = 33.2 bits (77), Expect = 0.051
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P+ CE C G+ R +L H R H K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT 40
Score = 32.1 bits (74), Expect = 0.13
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
S E+ Y C C K + + L H +RVH
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35
Score = 31.7 bits (73), Expect = 0.18
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ +KC C + L H++ H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 31.3 bits (72), Expect = 0.19
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC DC K Y R L H VH GE+T +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 30.9 bits (71), Expect = 0.33
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K R N+ HQR VH K
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGP 43
Score = 30.9 bits (71), Expect = 0.33
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K R N+ HQR VH K
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQR-VHMGEKTSGP 43
Score = 29.4 bits (67), Expect = 0.95
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG YN R NL H ++H +
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 29.4 bits (67), Expect = 0.98
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
S E + C++C K + + L H +++H
Sbjct: 7 GSVEKPYKCEDCGKGYNRRLNLDMH-QRVHM 36
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ S K + CE CGK + ++ L H VH +
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
E+ C C K + + L H +R H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVH 35
Score = 27.8 bits (63), Expect = 3.5
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
+ + + C+ CG ++ R NL H R H
Sbjct: 3 SGSSGS-VEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 27.1 bits (61), Expect = 7.8
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + Y H VH GE+ S
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-09
Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C VC K+F + ++L H R
Sbjct: 2 SSGSSGTGEKPYECDVCRKAF----------------------------SHHASLTQHQR 33
Query: 1339 NHTGEKKYVCE 1349
H+GEK
Sbjct: 34 VHSGEKPSGPS 44
Score = 49.8 bits (120), Expect = 5e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYECD C S SL H R+H+GEK
Sbjct: 3 SGS-SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 49.8 bits (120), Expect = 5e-08
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYECD C S SL H R+H+GEK
Sbjct: 3 SGS-SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C++C K F+ AS H+ HS E+ S
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY CDVC K+F L +H S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45
Score = 44.0 bits (105), Expect = 6e-06
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
TGEK Y C C +F+ ASL H+ HS
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36
Score = 44.0 bits (105), Expect = 6e-06
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
TGEK Y C C +F+ ASL H+ HS
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36
Score = 43.3 bits (103), Expect = 1e-05
Identities = 16/71 (22%), Positives = 22/71 (30%), Gaps = 29/71 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C +C K F H+ +L H R
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHA-----------------------------SLTQHQR 33
Query: 1998 IHTGEKKYVCE 2008
+H+GEK
Sbjct: 34 VHSGEKPSGPS 44
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C+ C +F H SL H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH 31
Score = 40.2 bits (95), Expect = 1e-04
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C +C S + SL QH R+H+GEKP
Sbjct: 9 GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C+ C K+F L H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH 31
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C++C F + +SL H+ HS E+ S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ C F++ +SL H+ H ++ +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C +C F+ + SL H R H+G++P
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C +F SL +H ++H G
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 33.6 bits (78), Expect = 0.030
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y+C C +F +L +H H+GEKP +
Sbjct: 13 YECDV--CRKAFSHHASLTQHQRVHSGEKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.053
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C C +++ + + L +H VH+GEK S
Sbjct: 9 GEK-PYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.17
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YECD+C+K ++ ++ HQR VH KP
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.17
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YECD+C+K ++ ++ HQR VH KP
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQR-VHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.44
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C+ C F L QH R H+ KP
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40
Score = 30.6 bits (70), Expect = 0.44
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
CD C F+ ++ +H +VHS E+P
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.59
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C +C K+F + LT+H +R H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH-QRVH 35
Score = 30.2 bits (69), Expect = 0.60
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C VC++ F L +H +RVH
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQH-QRVH 35
Score = 29.4 bits (67), Expect = 1.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y C +C K F L++H R
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33
Score = 27.1 bits (61), Expect = 7.0
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ C ++ +L H ++HS +P
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-09
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ CQVCGK+F SS+L H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAF----------------------------RVSSHLVQHHS 33
Query: 1339 NHTGEKKYVC 1348
H+GE+
Sbjct: 34 VHSGERPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C CG L H+ +H+GE+
Sbjct: 3 SGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C CG L H+ +H+GE+
Sbjct: 3 SGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C++CGK F + H HS ER S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 43.7 bits (104), Expect = 8e-06
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C VCGK+F HL +H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 15/41 (36%), Positives = 17/41 (41%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKC 1696
TGEK Y CQ CG +F + L H HS R
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
TGEK Y CQ CG +F + L H HS
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C +C K F S +L H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSS-----------------------------HLVQHHS 33
Query: 1998 IHTGEKKYVCET 2009
+H+GE+ +
Sbjct: 34 VHSGERPSGPSS 45
Score = 39.0 bits (92), Expect = 4e-04
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC +C L QH +H+GE+P
Sbjct: 9 GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 339 EHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C+ CGK+F + L H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH 31
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C+ CG +F L H+ H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C +F+ LV+H+ +H G
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37
Score = 36.7 bits (86), Expect = 0.003
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC +C F L H H+G+RP
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C++CG F S L H HS ER S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ CG F S L H H +R +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 33.3 bits (77), Expect = 0.040
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC C +++ S L +H +VH+GE+ S
Sbjct: 9 GEK-PYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 33.3 bits (77), Expect = 0.047
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C +F+ + L +H H+GE+P +
Sbjct: 13 YKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS 45
Score = 32.1 bits (74), Expect = 0.12
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 1796 EHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C+ C F+ HL+QH+ H+ +P
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERP 40
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C VC + F + + L +H VH
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVH 35
Score = 31.3 bits (72), Expect = 0.22
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F ++++H VHS ERP
Sbjct: 2 SSGSSG-TGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 30.2 bits (69), Expect = 0.64
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y+C +C K +++ H VH +P +
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGPSS 45
Score = 30.2 bits (69), Expect = 0.64
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y+C +C K +++ H VH +P +
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHS-VHSGERPSGPSS 45
Score = 29.8 bits (68), Expect = 0.72
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC C FR L +H H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 29.8 bits (68), Expect = 0.82
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C +C K F + + L +H VH
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C +C K+F S L +H H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVH 35
Score = 27.9 bits (63), Expect = 3.7
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + +L+ H +HS RP
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 27.5 bits (62), Expect = 5.5
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC C K + L H VH GER +
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 27.1 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC +C + + S +H VHSGER S
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 6e-09
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK+F T SNL H +
Sbjct: 3 SGSSGTGEKPYICAECGKAF----------------------------TIRSNLIKHQKI 34
Query: 1340 HTGEKKYVCE 1349
HT +K
Sbjct: 35 HTKQKPSGPS 44
Score = 49.4 bits (119), Expect = 9e-08
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY C CG + + +L H +IHT +K
Sbjct: 3 SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 49.4 bits (119), Expect = 9e-08
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY C CG + + +L H +IHT +K
Sbjct: 3 SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 46.4 bits (111), Expect = 1e-06
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y+C CGK FT ++ H+ H++++ S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C CGK+F + +L +H S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45
Score = 45.2 bits (108), Expect = 3e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y+C +CG +FT ++L H+ H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 45.2 bits (108), Expect = 3e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y+C +CG +FT ++L H+ H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 16/73 (21%), Positives = 21/73 (28%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F S NL H
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRS-----------------------------NLIKHQ 32
Query: 1997 RIHTGEKKYVCET 2009
+IHT +K +
Sbjct: 33 KIHTKQKPSGPSS 45
Score = 41.7 bits (99), Expect = 4e-05
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK+F ++ L H K H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y+C CG +F +L H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH 31
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PYIC C +F + +L++H KIH
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37
Score = 38.6 bits (91), Expect = 5e-04
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F +S+L H+ H K + +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C + +L +H ++HT +KP
Sbjct: 9 GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C FT +L H + HT +P
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F +S+L H+ H+K++ S
Sbjct: 7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 33.6 bits (78), Expect = 0.031
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +++ S L KH +HT +K S
Sbjct: 9 GEK-PYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 33.3 bits (77), Expect = 0.038
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ +IC CG F R N+++H K+H+ ++P
Sbjct: 3 SGSSG-TGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 33.3 bits (77), Expect = 0.038
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + Y C C +F + L +H HT +KP +
Sbjct: 9 GEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.12
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P++C C F R +L++H + HT KP
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP 40
Score = 32.1 bits (74), Expect = 0.13
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y C C K T R N+I HQ+ +H KP +
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.13
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y C C K T R N+I HQ+ +H KP +
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQK-IHTKQKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.14
Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK ++C+ C + F +++ L +H +++H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH-QKIH 35
Score = 30.9 bits (71), Expect = 0.30
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y C+ C K F I++ L +H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33
Score = 29.4 bits (67), Expect = 0.99
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
++C CG + R NL+ H KIH+ +P
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + C+ C F L +H+K H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 28.2 bits (64), Expect = 2.6
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCE 494
T G+ +IC CG F R NL+ H + H +
Sbjct: 3 SGSSGT-GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 27.9 bits (63), Expect = 3.3
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYK 1235
GE+ C C K+F S L +H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33
Score = 27.5 bits (62), Expect = 5.4
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y C++C K +T L H +H ++ +
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 26.7 bits (60), Expect = 8.4
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y C C + +T S +H ++H+ ++ S
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 7e-09
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+GEKP+ C CGK+F S+ L H R
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAF----------------------------GLSAELVRHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
KPY CD CG L H RIHTGEK
Sbjct: 3 SGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
KPY CD CG L H RIHTGEK
Sbjct: 3 SGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45
Score = 46.7 bits (112), Expect = 8e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK YVC+ CGK F A H+ H+ E+ S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ +G++PY CD CGK+F L RH S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK YVC CG +F A L H+ H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK YVC CG +F A L H+ H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 18/70 (25%), Positives = 19/70 (27%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGEK Y C C K F + L H R
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSA-----------------------------ELVRHQR 33
Query: 1998 IHTGEKKYVC 2007
IHTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY+C+YC +F LVRH +IH G
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GEKPY C+ CGK+F L L H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRH 31
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK YVC+ CG +F L H H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C L +H R+HTGEKP
Sbjct: 9 GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ CG F + L H+ H ++ +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C+ CG F + L H+ H+ E+ S
Sbjct: 7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.004
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F L H R HTG++P
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.012
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C C +++G +EL +H +HTGEK S
Sbjct: 9 GEK-PYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.042
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y C + C +F L H HTGEKP +
Sbjct: 13 YVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.057
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ ++CD CG F ++RH ++H+ E+P
Sbjct: 3 SGSSG-SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.076
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P++C++C F L++H R HT KP
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40
Score = 31.3 bits (72), Expect = 0.21
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ Y C C K F + L H +R+H
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIH 35
Score = 30.9 bits (71), Expect = 0.26
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y CD C K ++ HQR +H KP
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.26
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y CD C K ++ HQR +H KP
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQR-IHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.28
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK +VC C + F + L H +R+H
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIH 35
Score = 30.9 bits (71), Expect = 0.34
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ + C YC F L H++ H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 28.6 bits (65), Expect = 2.2
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG + L+ H +IH+ +P
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.3
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F + L H +R H
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIH 35
Score = 27.1 bits (61), Expect = 6.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y C C + + +E RH +H+GE+ S
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 8.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + CD C K+F L H +++HT
Sbjct: 7 GSGEKPYVCDYCGKAFGLSAELVRH-QRIHT 36
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 7e-09
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGKSF T S L++H +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSF----------------------------TWKSRLRIHQKC 34
Query: 1340 HTGEKKYVC 1348
HTGE+
Sbjct: 35 HTGERHSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C CG + K L H + HTGE+
Sbjct: 3 SGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C CG + K L H + HTGE+
Sbjct: 3 SGS-SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FT + H+ H+ ER S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 44.1 bits (105), Expect = 6e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C CGKSF K L H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH 31
Score = 44.1 bits (105), Expect = 6e-06
Identities = 20/42 (47%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGKSF K RL H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGP 43
Score = 43.7 bits (104), Expect = 1e-05
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C CG SFT + L H+ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 43.7 bits (104), Expect = 1e-05
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C CG SFT + L H+ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/33 (42%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG SF L IH H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 41.4 bits (98), Expect = 6e-05
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C FT LR+H + HTG+R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F S L++H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKS-----------------------------RLRIHQ 32
Query: 1997 RIHTGEKKYVC 2007
+ HTGE+
Sbjct: 33 KCHTGERHSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F +KS L H+ H +R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 39.1 bits (92), Expect = 4e-04
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F +KS L H+ H+ ER S
Sbjct: 7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C SF K L H K H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37
Score = 36.4 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + L+ H + HTGE+
Sbjct: 9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC +C +S+ S L+ H HTGE+H S
Sbjct: 9 GEK-PYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 33.3 bits (77), Expect = 0.041
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y CS C K F K+RL H +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33
Score = 32.9 bits (76), Expect = 0.053
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
YKC C SF + L+ H HTGE+
Sbjct: 13 YKCSD--CGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 32.1 bits (74), Expect = 0.12
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKCSDC K++T L+ H H GER +
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 31.7 bits (73), Expect = 0.16
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + CS C + F K+RL H ++ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCH 35
Score = 31.0 bits (71), Expect = 0.29
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + + H K H+ ER
Sbjct: 3 SGSSG-TGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 30.6 bits (70), Expect = 0.36
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C KSF SRL H ++ H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCH 35
Score = 30.6 bits (70), Expect = 0.39
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KCS C +F L H+K H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 30.2 bits (69), Expect = 0.52
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C C K T + + HQ+ H +
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGP 43
Score = 30.2 bits (69), Expect = 0.52
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C C K T + + HQ+ H +
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQK-CHTGERHSGP 43
Score = 29.8 bits (68), Expect = 0.69
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + L H + HT +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH 40
Score = 29.4 bits (67), Expect = 0.97
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C +C KSFT K LR H +K HT
Sbjct: 7 GTGEKPYKCSDCGKSFTWKSRLRIH-QKCHT 36
Score = 29.0 bits (66), Expect = 1.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + +T S + H + H+GER S
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 28.7 bits (65), Expect = 1.8
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ + K + C CGKSF K LR H H+ R
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 27.5 bits (62), Expect = 5.7
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG + + L H K H+ R
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB:
2ena_A 2en4_A
Length = 46
Score = 52.5 bits (127), Expect = 7e-09
Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKPF C CGK F + S L VH +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGF----------------------------SRRSALNVHHK 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 LHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++C CG G S + +L+ H+++HTGEK
Sbjct: 2 SSGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++C CG G S + +L+ H+++HTGEK
Sbjct: 2 SSGS-SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C CGKGF++ ++ H H+ E+ S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 1e-06
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++P+ C CGK F + LN H S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C +CG F++ ++L H H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C +CG F++ ++L H H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKP+ C CGK F + LN H+ K H G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C CG F +LN+H+ H
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK + C C K F R S L +H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRS-----------------------------ALNVHH 32
Query: 1997 RIHTGEKKYVCET 2009
++HTGEK +
Sbjct: 33 KLHTGEKPSGPSS 45
Score = 40.2 bits (95), Expect = 2e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C SR +L H +LHTGEKP
Sbjct: 9 GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC C F+R +L +H + HTG++P
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C CG GF+ +S+L H H ++ +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C CG GF +S+L+ H H+ E+ S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.005
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK FKC EC + + S L H +HTGEK S
Sbjct: 9 GEK-PFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C C F + +L H+K+H G
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 34.0 bits (79), Expect = 0.020
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C F R +AL H HTGEKP +
Sbjct: 13 FKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F C C +GF ++ LN H ++H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLH 35
Score = 31.7 bits (73), Expect = 0.17
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C C GF R L H++ HT KP
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP 40
Score = 30.6 bits (70), Expect = 0.40
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ + C C K F ++ L+ H++
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33
Score = 30.6 bits (70), Expect = 0.41
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ C CG F+ R + H K+H+ E+P
Sbjct: 3 SGSSG-TGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.78
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K ++C C K + R + H + +H KP
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.78
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K ++C C K + R + H + +H KP
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHK-LHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.81
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F + S L H + H
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLH 35
Score = 29.0 bits (66), Expect = 1.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC +C K ++R L H +H GE+ +
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.8
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ FKC C F L H K H
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 28.6 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE F C EC K F+ + L H KLHT
Sbjct: 7 GTGEKPFKCVECGKGFSRRSALNVH-HKLHT 36
Score = 27.5 bits (62), Expect = 5.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG ++ R L H K+H+ +P
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+KC C + ++ S H ++H+GE+ S
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.5 bits (127), Expect = 8e-09
Identities = 21/70 (30%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKPF C C K+F SNL VH R
Sbjct: 3 SGSSGTGEKPFECSECQKAF----------------------------NTKSNLIVHQRT 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP+EC C ++K +L H R HTGEK
Sbjct: 3 SGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP+EC C ++K +L H R HTGEK
Sbjct: 3 SGS-SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C C K F ++ H+ TH+ E+ S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C +C +F ++L H+ +H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 44.4 bits (106), Expect = 5e-06
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C +C +F ++L H+ +H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 43.6 bits (104), Expect = 8e-06
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 9/42 (21%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCS 676
+ TG++P+ C C K+F K +L H S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 4e-05
Identities = 17/73 (23%), Positives = 22/73 (30%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK + C C K F S NL +H
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKS-----------------------------NLIVHQ 32
Query: 1997 RIHTGEKKYVCET 2009
R HTGEK +
Sbjct: 33 RTHTGEKPSGPSS 45
Score = 40.9 bits (97), Expect = 7e-05
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C C F KS+L H+ TH ++ +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 8e-05
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP+ C C K+F K L H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH 31
Score = 40.2 bits (95), Expect = 1e-04
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C C +F +L +H +H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C C F KS+L H+ +H+ E+ S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 6e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C F +L +H RTHTG++P
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE ++C C + +L H R HTGEKP
Sbjct: 9 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C C +F K +L+ H + H G
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37
Score = 34.8 bits (81), Expect = 0.015
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F+C EC +++ S L H HTGEK S
Sbjct: 9 GEK-PFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.034
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
++C C +F + L H +HTGEKP +
Sbjct: 13 FECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.12
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F CS CQ+ F K+ L H +R H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTH 35
Score = 32.1 bits (74), Expect = 0.13
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ C C FNT+ N++ H + H+ E+P
Sbjct: 3 SGSSG-TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.14
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ + CS C K F K+ L H R
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR 33
Score = 31.3 bits (72), Expect = 0.19
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K +EC C+K + N+I HQR H KP +
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPSS 45
Score = 31.3 bits (72), Expect = 0.19
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K +EC C+K + N+I HQR H KP +
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQR-THTGEKPSGPSS 45
Score = 30.5 bits (70), Expect = 0.35
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C C F + +L+ H RTHT KP
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKP 40
Score = 30.5 bits (70), Expect = 0.42
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ F+CS C F L H++TH
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 28.6 bits (65), Expect = 1.8
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C K+F S L H +R+H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTH 35
Score = 28.6 bits (65), Expect = 2.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
++CS+C K + L H H GE+ +
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 27.8 bits (63), Expect = 4.1
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
+GE F C EC K+F TK L H ++ HT
Sbjct: 7 GTGEKPFECSECQKAFNTKSNLIVH-QRTHT 36
Score = 27.8 bits (63), Expect = 4.4
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ C +NT+ NL+ H + H+ +P
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 8.4
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
T G+ C C F+T+ NL+ H RTH
Sbjct: 3 SGSSGT-GEKPFECSECQKAFNTKSNLIVHQRTH 35
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 8e-09
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GEKPF C+ CGK F T +S L H R
Sbjct: 3 SGSSGSGEKPFKCEECGKRF----------------------------TQNSQLHSHQRV 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKPSGP 43
Score = 49.4 bits (119), Expect = 7e-08
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
KP++C+ CG + L H R+HTGEK
Sbjct: 2 SSGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45
Score = 49.4 bits (119), Expect = 7e-08
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
KP++C+ CG + L H R+HTGEK
Sbjct: 2 SSGS-SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 9e-07
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK + CE CGK FTQ + + H+ H+ E+ S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK + C++CG FTQ + L H+ H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 44.4 bits (106), Expect = 5e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK + C++CG FTQ + L H+ H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 44.1 bits (105), Expect = 7e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++P+ C+ CGK F L+ H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31
Score = 41.7 bits (99), Expect = 4e-05
Identities = 17/70 (24%), Positives = 21/70 (30%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGEK + C C K F ++S L H R
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNS-----------------------------QLHSHQR 33
Query: 1998 IHTGEKKYVC 2007
+HTGEK
Sbjct: 34 VHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GEKP+ CE CGK F +L++H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+GEK + CE CG F L+ H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC C FT+ L H R HTG++P
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 6e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C ++ L H R+HTGEKP
Sbjct: 9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+P+ CE C F + L H ++H G
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + CE CG F S LH H+ H+ E+ S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + CE CG F S L+ H+ H ++ +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.015
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK FKC EC + + S+L H VHTGEK S
Sbjct: 9 GEK-PFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.051
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ + C C K F ++L H +RVH
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35
Score = 32.9 bits (76), Expect = 0.056
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C F + + L H HTGEKP +
Sbjct: 13 FKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.12
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK F C C + F ++L+ H +RVH
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35
Score = 31.7 bits (73), Expect = 0.15
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +PF CE C F L H R HT KP
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP 40
Score = 30.6 bits (70), Expect = 0.41
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K ++C+ C K+ T + HQR VH KP
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.41
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K ++C+ C K+ T + HQR VH KP
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQR-VHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.62
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F Q S+L H +R H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVH 35
Score = 29.8 bits (68), Expect = 0.79
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ C+ CG F + H +VH+ E+P
Sbjct: 3 SGSSG-SGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ FKC C F L H++ H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 28.3 bits (64), Expect = 2.6
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE F C+EC K FT L H +++HT
Sbjct: 7 GSGEKPFKCEECGKRFTQNSQLHSH-QRVHT 36
Score = 28.3 bits (64), Expect = 2.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC +C K +T+ +L H VH GE+ +
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+KC C + +T S+ H VH+GE+ S
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 8e-09
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK+F +NL H R
Sbjct: 2 SSGSSGTGEKPYRCGECGKAF----------------------------AQKANLTQHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY C CG + K +L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY C CG + K +L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C CGK+F K +L +H S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 5e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F Q A+ H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG +F Q A+L H+ H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG +F Q A+L H+ H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/71 (25%), Positives = 22/71 (30%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F + + NL H
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKA-----------------------------NLTQHQ 32
Query: 1997 RIHTGEKKYVC 2007
RIHTGEK
Sbjct: 33 RIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK+F K L H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG +F +L H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH 31
Score = 38.6 bits (91), Expect = 5e-04
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C ++ +L QH R+HTGEKP
Sbjct: 9 GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F +K +L +H +IH G
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F + +L H R HTG++P
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG FA K++L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F K++L H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.044
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C EC +++ + L +H +HTGEK S
Sbjct: 9 GEK-PYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.11
Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + N+ +H ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F K L +H +R+H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIH 35
Score = 32.1 bits (74), Expect = 0.13
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y+C C +F + L +H HTGEKP
Sbjct: 13 YRCGE--CGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F K L++H +R+H
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIH 35
Score = 30.6 bits (70), Expect = 0.45
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C C K + N+ HQR +H KP
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.45
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C C K + N+ HQR +H KP
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQR-IHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.47
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + +L QH R HT KP
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKP 40
Score = 30.2 bits (69), Expect = 0.59
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F Q + LT+H +R H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++C C F LT+H++ H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 28.2 bits (64), Expect = 2.5
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + + NL H +IH+ +P
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C EC K+F K L +H +++HT
Sbjct: 7 GTGEKPYRCGECGKAFAQKANLTQH-QRIHT 36
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-09
Identities = 16/69 (23%), Positives = 22/69 (31%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C+ CGK + NL +H +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGY----------------------------NSKFNLDMHQKV 34
Query: 1340 HTGEKKYVC 1348
HTGE+
Sbjct: 35 HTGERPSGP 43
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG G +SK +LD H ++HTGE+
Sbjct: 3 SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG G +SK +LD H ++HTGE+
Sbjct: 3 SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y CE CGKG+ + H+ H+ ER S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 44.1 bits (105), Expect = 6e-06
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 9/42 (21%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCS 676
+ TG++PY C+ CGK + +K +L+ H S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C++CG + +L H+ H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C++CG + +L H+ H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCH 381
S TGEKPY CE CGK + K L+ H K H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPS 44
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K + NL +H
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKF-----------------------------NLDMHQ 32
Query: 1997 RIHTGEKKYVC 2007
++HTGE+
Sbjct: 33 KVHTGERPSGP 43
Score = 41.0 bits (97), Expect = 9e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y CE CG + +L++H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C + +L +H + HTG+RP
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y CE CG G+ K +L H+ H+ ER S
Sbjct: 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 38.3 bits (90), Expect = 6e-04
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y CE CG G+ K +L H+ H +R +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + +L H ++HTGE+P
Sbjct: 9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY CE C + K +L H K+H G
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37
Score = 33.3 bits (77), Expect = 0.040
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC +C + Y + L H VHTGE+ S
Sbjct: 9 GEK-PYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 33.3 bits (77), Expect = 0.044
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C +G+ K L+ H ++VH
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVH 35
Score = 32.9 bits (76), Expect = 0.052
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C+ CG +N++ N+ H KVH+ ERP
Sbjct: 3 SGSSG-TGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 32.9 bits (76), Expect = 0.062
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ CE C G+ + +L H + HT +P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP 40
Score = 31.7 bits (73), Expect = 0.18
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
G + YKC C + L H HTGE+P
Sbjct: 9 GEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 31.3 bits (72), Expect = 0.19
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K ++ N+ HQ+ VH +P
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGP 43
Score = 31.3 bits (72), Expect = 0.19
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K ++ N+ HQ+ VH +P
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQK-VHTGERPSGP 43
Score = 31.0 bits (71), Expect = 0.34
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K + K L H ++VH
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVH 35
Score = 30.2 bits (69), Expect = 0.51
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC C + L H+K H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 29.8 bits (68), Expect = 0.75
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG YN++ NL H K+H+ RP
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 29.8 bits (68), Expect = 0.76
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC C K Y + L H VH GER +
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 29.4 bits (67), Expect = 1.1
Identities = 8/34 (23%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K + L H ++ H
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVH 35
Score = 27.5 bits (62), Expect = 4.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + Y S H +VH+GER S
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 27.1 bits (61), Expect = 6.5
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C++C K + +K L H +K+HT
Sbjct: 7 GTGEKPYKCEKCGKGYNSKFNLDMH-QKVHT 36
Score = 27.1 bits (61), Expect = 8.1
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ + K + CE CGK + K L H VH+ RP
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 26.7 bits (60), Expect = 8.3
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
T G+ + C+ CG ++++ NL H + H
Sbjct: 3 SGSSGT-GEKPYKCEKCGKGYNSKFNLDMHQKVH 35
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 52.2 bits (126), Expect = 9e-09
Identities = 17/70 (24%), Positives = 20/70 (28%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C+ CGK F +L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGF----------------------------ICRRDLYTHHMV 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 6e-08
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG G ++ L H+ +HTGEK
Sbjct: 2 SSGS-SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 6e-08
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG G ++ L H+ +HTGEK
Sbjct: 2 SSGS-SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y CE CGKGF Y H H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 44.1 bits (105), Expect = 6e-06
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C++CG F L+ H H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 44.1 bits (105), Expect = 6e-06
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C++CG F L+ H H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 43.7 bits (104), Expect = 8e-06
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ CGK F+ ++ L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F+ +L H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRR-----------------------------DLYTHH 32
Query: 1997 RIHTGEKKYVCET 2009
+HTGEK +
Sbjct: 33 MVHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 2e-05
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY CE CGK F +R L H+ H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y CE CG F+ L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y CE CG GF + LY H H ++ +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 4e-04
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y CE CG GF+ + L+ H H+ E+ S
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C L H +HTGEKP
Sbjct: 9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C F L H HTG++P
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 36.8 bits (86), Expect = 0.003
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY CE C F ++ L H+ +H G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37
Score = 35.6 bits (83), Expect = 0.007
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + +L H VHTGEK S
Sbjct: 9 GEK-PYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.007
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F L H + HTGEKP +
Sbjct: 13 YKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.054
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ CE C GF CR+ L H+ HT KP
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP 40
Score = 31.7 bits (73), Expect = 0.16
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F R+++ H VH+ E+P
Sbjct: 3 SGSSG-TGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.20
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC C F C R L H H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 31.0 bits (71), Expect = 0.25
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C +GF + L H VH
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35
Score = 30.2 bits (69), Expect = 0.48
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F + L H VH
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35
Score = 30.2 bits (69), Expect = 0.55
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y+C+ C K R+++ H VH KP +
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGPSS 45
Score = 30.2 bits (69), Expect = 0.55
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y+C+ C K R+++ H VH KP +
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHM-VHTGEKPSGPSS 45
Score = 29.8 bits (68), Expect = 0.84
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC +C K + +L H MVH GE+ +
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 1.3
Identities = 9/34 (26%), Positives = 10/34 (29%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F L H H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVH 35
Score = 28.3 bits (64), Expect = 2.5
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + + + H VH+GE+ S
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.5
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K + CE CGK F + L H +VH+ +P
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.4
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C+EC K F ++ L H +HT
Sbjct: 7 GTGEKPYKCEECGKGFICRRDLYTH-HMVHT 36
Score = 26.7 bits (60), Expect = 8.9
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + R++L +H +H+ +P
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGP 43
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 52.1 bits (126), Expect = 9e-09
Identities = 17/70 (24%), Positives = 21/70 (30%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGE+ + C CGK+F S L +H R
Sbjct: 2 SSGSSGTGERHYECSECGKAF----------------------------ARKSTLIMHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 48.6 bits (117), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+ YEC CG + K +L H RIHTGEK
Sbjct: 3 SGS-SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 48.6 bits (117), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+ YEC CG + K +L H RIHTGEK
Sbjct: 3 SGS-SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 9e-07
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGE+ Y C CGK F + ++ H+ H+ E+ S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG+R Y C CGK+F K L H S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 8e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGE+ Y C +CG +F + ++L H+ H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 43.6 bits (104), Expect = 8e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGE+ Y C +CG +F + ++L H+ H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GE+ Y C C K F R S L +H R
Sbjct: 3 SGSSGTGERHYECSECGKAFARKS-----------------------------TLIMHQR 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 41.3 bits (98), Expect = 6e-05
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 339 EHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGE+ Y C CGK+F K L H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH 31
Score = 39.0 bits (92), Expect = 3e-04
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGE+ Y C CG +F +L +H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C +R +L H R+HTGEKP
Sbjct: 9 GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ER Y C C +F K +L+ H +IH G
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37
Score = 38.6 bits (91), Expect = 6e-04
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE+ Y C CG FA KS+L H+ H ++ +
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 9e-04
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F R +L +H R HTG++P
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GE+ Y C CG F KS+L H+ H+ E+ S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.040
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE+H+ CS C + F K+ L H +R+H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH-QRIH 35
Score = 33.2 bits (77), Expect = 0.041
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GER Y CS C K F K+ L H +R+H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH-QRIH 35
Score = 32.9 bits (76), Expect = 0.071
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ ++C EC +++ S L H +HTGEK S
Sbjct: 9 GER-HYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.097
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G R Y+C C +F R + L H HTGEKP +
Sbjct: 9 GERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.16
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 1796 EHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ R + C C F + L+ H R HT KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKP 40
Score = 31.7 bits (73), Expect = 0.18
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + ++ H ++H+ E+P
Sbjct: 2 SSGSSG-TGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.21
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ YEC C K + +I HQR +H KP
Sbjct: 11 RHYECSECGKAFARKSTLIMHQR-IHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.21
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ YEC C K + +I HQR +H KP
Sbjct: 11 RHYECSECGKAFARKSTLIMHQR-IHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.49
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ER ++CS C F TL H++ H
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 28.2 bits (64), Expect = 2.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+CS+C K + R L H +H GE+ +
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.2
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 451 EHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G+ + C CG F + L+ H R H ++
Sbjct: 2 SSGSSGT-GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.6
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG + + L+ H +IH+ +P
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.6
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ + +++ C CGK+F +K L H +H+ +P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C EC K+F K L H +++HT
Sbjct: 7 GTGERHYECSECGKAFARKSTLIMH-QRIHT 36
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 17/71 (23%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEK + C CGK F + +S L H +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVF----------------------------SRNSQLSQHQK 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
K Y+C+ CG S L H +IHTGEK
Sbjct: 3 SGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
K Y+C+ CG S L H +IHTGEK
Sbjct: 3 SGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 7e-06
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK+Y C CGK F++ + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 8e-06
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++ Y C+ CGK F L++H S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 2e-05
Identities = 19/72 (26%), Positives = 24/72 (33%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C+ C KVF R+S L H +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNS-----------------------------QLSQHQK 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 42.1 bits (100), Expect = 3e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK+Y C +CG F++ + L H+ H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK+Y C +CG F++ + L H+ H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCH 381
S TGEK Y C CGK F +L+ H K H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 1e-04
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +YKC C + SR L QH ++HTGEKP
Sbjct: 9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK+Y C CG F L+ H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQH 31
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+ Y C C F L +H KIH G
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37
Score = 36.7 bits (86), Expect = 0.003
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +F+R L H + HTG++P
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.004
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK+Y C CG F+ S L H+ H ++ +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.007
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK+Y C CG F S L H+ H+ E+ S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.046
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F R + L +H HTGEKP +
Sbjct: 13 YKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSS 45
Score = 33.3 bits (77), Expect = 0.050
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++KC EC + + S+L +H +HTGEK S
Sbjct: 9 GEK-RYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.20
Identities = 10/35 (28%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F ++L++H +++H
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIH 35
Score = 31.3 bits (72), Expect = 0.23
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + + C C F L QH + HT KP
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP 40
Score = 31.0 bits (71), Expect = 0.31
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE++Y C+ C K F ++LS+H +++H
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIH 35
Score = 30.6 bits (70), Expect = 0.38
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ ++ C+ CG F+ + +H K+H+ E+P
Sbjct: 3 SGSSG-TGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.68
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C F L++H+K H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 29.0 bits (66), Expect = 1.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K + + HQ+ +H KP
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K + + HQ+ +H KP
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQK-IHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.6
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG ++ L H KIH+ +P
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K ++R +L H +H GE+ +
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 60.1 bits (145), Expect = 1e-08
Identities = 103/676 (15%), Positives = 182/676 (26%), Gaps = 233/676 (34%)
Query: 1410 NEYNTRKNLLSHMKI-HSTGRPHQ----CDVCNAKFKLRKYLKHVSASSCHQKVPNKSV- 1463
+ Y+TR LSH + H P +F K L + P
Sbjct: 2 DAYSTRPLTLSHGSLEHVLLVPTASFFIASQLQEQFN--KILPEPTEGFAADDEPTTPAE 59
Query: 1464 -TAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECD-TCG- 1520
KF + E S+ + ++ L +E G
Sbjct: 60 LVGKFLGYVSSLVEPSKVG--------------------QFDQVLNLCLTEFENCYLEGN 99
Query: 1521 --HGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSC 1578
H L++ L + K + + Y R S S+
Sbjct: 100 DIHALAA--KLLQENDTTLVKTKELIKN------------YITARIMAKRPFDKKSNSAL 145
Query: 1579 HQKVPNKSVTAKFKALF-----TER--SESSESSKKIYECDICKKQVTNRKNMIDHQRSV 1631
+ V + A+ A+F T+ E + +Y+ + V
Sbjct: 146 FRAVGEGN--AQLVAIFGGQGNTDDYFEELRD----LYQ---------------TYHVLV 184
Query: 1632 HELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSET 1691
+L+K S ++L + R +K Q G + +W +
Sbjct: 185 GDLIK-----------FSAETLSELIRTTLDAEKVFTQ--GLNILEW-------LENPSN 224
Query: 1692 RNQKCEESFDNCNNLWSHMFIKHEDSDFVCNL---CPPDSKI-VIKYAHLLERHMKKHHT 1747
D D++ ++ CP I VI+ AH +
Sbjct: 225 T----------------------PDKDYLLSIPISCPL---IGVIQLAHYV--------- 250
Query: 1748 MQQRCVCSYCGNSYANPGNLRTHMVVHSNKNHICEICGKSFKKKDLLREHMIVHSTLRPF 1807
G PG LR++ + G + + L+ I +
Sbjct: 251 ----VTAKLLG---FTPGELRSY------------LKGATGHSQGLVTAVAIAETDSWE- 290
Query: 1808 LCEFCNAGFKCRKHLLQH-YRTH-TKPKATNSFSSSKCEESFDNCNNLWSHMFIKHENSD 1865
F + K L R + P S S E+S +N + S M
Sbjct: 291 --SFFVSVRKAITVLFFIGVRCYEAYPNT--SLPPSILEDSLENNEGVPSPM-------- 338
Query: 1866 FVCNLCPPDSKIVIKYAHLLVRHMKKHHTMQLSISSVSKHIKSKTQIF---VDGAIRFKC 1922
L + ++ + +Q ++ + H+ + Q+ V+GA
Sbjct: 339 ------------------LSISNLTQEQ-VQDYVNKTNSHLPAGKQVEISLVNGAKNLVV 379
Query: 1923 --PDCPTILQTF----RGLKA--HLDI----HSGEKDYACHICNKVFVR---------HS 1961
P P L R KA LD S K F HS
Sbjct: 380 SGP--PQSLYGLNLTLRKAKAPSGLDQSRIPFSERK--------LKFSNRFLPVASPFHS 429
Query: 1962 TLENHMKAVHEKI------RDFQCKVCDRAF--FDVYNLKLHMRIHTGE-KKYVCETCGA 2012
L + + I + D +D ++ +R+ +G + + +
Sbjct: 430 HL---LVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGS-DLRVLSGSISERIVDCIIR 485
Query: 2013 SFVHWGSLNIHNYSHI 2028
V W + +HI
Sbjct: 486 LPVKWETTTQFKATHI 501
Score = 47.7 bits (113), Expect = 5e-05
Identities = 93/606 (15%), Positives = 157/606 (25%), Gaps = 217/606 (35%)
Query: 906 LDAH----VNIEHGKRVHGDDEFEC---------YQCNQCGVELYLGREAFLNHMRHIHS 952
+DA+ + + HG E + +Q L +E F I
Sbjct: 1 MDAYSTRPLTLSHG-------SLEHVLLVPTASFFIASQ------L-QEQFN----KILP 42
Query: 953 DDTTHDMLDNYVVKHVADITTPCILCKDPSLFSMFCVKHDARISIHHCDSHNDRHHKCTL 1012
+ T D+ + TTP L F + + S +
Sbjct: 43 EPTEGFAADD-------EPTTP------AELVGKF---------LGYVSSLVEPSKVGQF 80
Query: 1013 CDAVFTNCENVWKHKFL----VHSDENLACNLCEEED----------------------P 1046
D V C +++ +L +H+ LA L +E D P
Sbjct: 81 -DQVLNLCLTEFENCYLEGNDIHA---LAAKLLQENDTTLVKTKELIKNYITARIMAKRP 136
Query: 1047 ITIKSPSALMKHWRQWHWRL------QEHEEHLNKSTIIVDGVVKFQCPHCNINH--DDL 1098
KS SAL + + + +L Q G N + ++L
Sbjct: 137 FDKKSNSALFRAVGEGNAQLVAIFGGQ--------------G---------NTDDYFEEL 173
Query: 1099 VSLKQHIVEAHVPSISCSHCEMKFKNLKDFKEHMTSV--HLNKRNLRDDTMYCE------ 1150
+ + + + + D + L + L + ++ +
Sbjct: 174 ----RDLYQTYHVLV------------GDLIKFSAETLSELIRTTLDAEKVFTQGLNILE 217
Query: 1151 -LTEEEITLNIDDM-HAPNRTVESDREKYKLVEGDQ-VRYK--CSDCDKTYTRFYELKCH 1205
L T + D + P + S L+ Q Y T
Sbjct: 218 WLENPSNTPDKDYLLSIP---I-S----CPLIGVIQLAHYVVTAKLLGFTPGELRSYLKG 269
Query: 1206 LMVHRGE----RTMSCTMCDKSFYQVSRLTEHY-----KRSHRMKVTRVNQLK-KKSEIC 1255
H ++ T +SF+ R R + L E
Sbjct: 270 ATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYE--AYPNTSLPPSILEDS 327
Query: 1256 IE-GETKYKCPLCP--SITS-RYDSLQQHMRLHTGEKPFSCQ-------------VCG-- 1296
+E E P P SI++ + +Q ++ P Q V G
Sbjct: 328 LENNEGV---P-SPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPP 383
Query: 1297 KSFAAREHLKRHFNNIHMKVGY-QCNVCGRVLTDSSNLKVHMRN-------HT----GEK 1344
+S L G Q R+ LK R H+
Sbjct: 384 QSL---YGLNLTLRKAKAPSGLDQS----RIPFSERKLKFSNRFLPVASPFHSHLLVPAS 436
Query: 1345 KYVCEICGKGFTQWASHY-----YHKFTHSEERSFKCSY----CAMTFRCP---RTLTEH 1392
+ + K + + Y F S+ R S R P T T+
Sbjct: 437 DLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQF 496
Query: 1393 KKTHVL 1398
K TH+L
Sbjct: 497 KATHIL 502
Score = 47.4 bits (112), Expect = 7e-05
Identities = 67/450 (14%), Positives = 114/450 (25%), Gaps = 173/450 (38%)
Query: 175 VHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTVNILTQANHDNEDKLDVTKIFN-VNKED 233
+HA + +K + R ++ +F V + +
Sbjct: 101 IHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNS-------ALFRAVGEGN 153
Query: 234 CQIM-----QGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLN 288
Q++ QG Y F EL+ L
Sbjct: 154 AQLVAIFGGQGN---------TDDY--FEELRD-------------------------LY 177
Query: 289 EHYK-RVHHMNFTSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQR-FNALQEHMLSHTG 346
+ Y V + S + L T +D F + N L+ L +
Sbjct: 178 QTYHVLVGDLIKFSAET-LSELIRTTLD-----------AEKVFTQGLNILE--WLENPS 223
Query: 347 EKP---YTCEACGKSFPLKRRLN----AHYNKWHLGKGYRCHICGSTMSNAANFKDHLDS 399
P Y + S PL + AHY + G T + +L
Sbjct: 224 NTPDKDYLL-SIPISCPL---IGVIQLAHYV-------VTAKLLGFTP---GELRSYL-- 267
Query: 400 HRGEKKYTCETCGTG---------------FAYKSSLYHHRFTHIKDR---TYPCTYCER 441
+G G F I R YP T
Sbjct: 268 -KG-----ATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLP- 320
Query: 442 KYQSPKTLKEHLKVHTSGD------VRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCEL 495
P L++ L+ + G + ++ T++ + ++
Sbjct: 321 ----PSILEDSLE-NNEGVPSPMLSISNL---------TQEQVQDYVNK----------- 355
Query: 496 CNANLKTRRSLLRHYTTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRI---KYKCP 552
N++L + + I+ N + + +V Q L G + K K P
Sbjct: 356 TNSHLPAGKQV------------EISLVN----GAKNLVVSGPPQSLYGLNLTLRKAKAP 399
Query: 553 L-CDRIYTSFSETKRHFEV---------HS 572
D+ FSE K F HS
Sbjct: 400 SGLDQSRIPFSERKLKFSNRFLPVASPFHS 429
Score = 45.4 bits (107), Expect = 3e-04
Identities = 58/382 (15%), Positives = 112/382 (29%), Gaps = 112/382 (29%)
Query: 783 LRHTKVHSTERPYICEYCNVSFKEKKSLVRH----YKIH-KGVNTNTLPSNDIIKHMRNA 837
LR ++ T + + S + L+R K+ +G+ +I++ + N
Sbjct: 173 LR--DLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGL--------NILEWLENP 222
Query: 838 HQYDIIQAQDYLIQSTQEIDLPCEMCGELNLFSKY---CKEHGIVCEESDTYKKKTHSCI 894
+DYL+ I P + G + + Y K G E +
Sbjct: 223 ---SNTPDKDYLLSIP--ISCP--LIG-VIQLAHYVVTAKLLGFTPGE---LRSYLKGAT 271
Query: 895 YCEE--------SFSDS--KFLDAHVNIEH-----GKRVHGDDEFECYQCNQCGVELYLG 939
+ + +DS F + G R + E Y + +
Sbjct: 272 GHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCY-----EAYP--NTSLPPSIL 324
Query: 940 REAFLN------HMRHIHSDDTTHDMLDNYVVK-----------HVADITTP--CILCKD 980
++ N M I + T + + +YV K ++ + ++
Sbjct: 325 EDSLENNEGVPSPMLSIS--NLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGP 382
Query: 981 P-SLFSMFCVKHDARISIHHCDSHNDRHHKCTLCDAVFTNCENVWKHKFLVHSDENLACN 1039
P SL+ + + S D+ F+ + + ++FL
Sbjct: 383 PQSLYGL--NLTLRKA---KAPSGLDQSR------IPFSERKLKFSNRFL---------- 421
Query: 1040 LCEEEDPITIKSP--SALMKHWRQWHWRLQEHEEHLNKSTIIVDGVVKFQCP-HCNINHD 1096
P+ SP S L+ + L K+ + + Q P + +
Sbjct: 422 ------PVA--SPFHSHLLVP------ASDLINKDLVKNNVSFNAK-DIQIPVYDTFDGS 466
Query: 1097 DLVSLKQHIVEAHVPSISCSHC 1118
DL L I E V I
Sbjct: 467 DLRVLSGSISERIVDCIIRLPV 488
Score = 39.6 bits (92), Expect = 0.013
Identities = 58/368 (15%), Positives = 110/368 (29%), Gaps = 126/368 (34%)
Query: 1318 YQCNVCGRVLTDSSN-LKVHMRNHTGEKKYVCEICGKGF--TQWASHYYHKFTHSEERSF 1374
Y V G ++ S+ L +R +K +G +W + +
Sbjct: 180 YHVLV-GDLIKFSAETLSELIRTTLDAEKV----FTQGLNILEWLEN--------PSNTP 226
Query: 1375 KCSY-CAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
Y ++ CP + + H T T L S++K +TG H
Sbjct: 227 DKDYLLSIPISCP--------LIGVIQLAHYVVTAKLLGFTPGELRSYLK-GATG--HSQ 275
Query: 1434 DVCNAKFKLRKYLKHVSASS----------------------CHQKVPNKSVTAKFKALF 1471
+ A ++ + C++ PN S+
Sbjct: 276 GLVTAVA--------IAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDS 327
Query: 1472 TERSESSES--------SKKIYECDICK--------KQV----TN-RKNMIDHQRSVHEL 1510
E +E S +++ + + K KQV N KN++ V
Sbjct: 328 LENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLV-----V--- 379
Query: 1511 LKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQ----QCGASFTQWASLFYHKF---S 1563
G +SL Y ++ +K Q F++ F ++F +
Sbjct: 380 --------SGP----PQSL---YGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVA 424
Query: 1564 ---HSETRNQKHVSASSCHQKVPNKSVTAKFKAL-----FTE-----RSESSESSKKIYE 1610
HS ++ ++ + +V+ K + T R S S++I +
Sbjct: 425 SPFHSHLLVP---ASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVD 481
Query: 1611 CDICKKQV 1618
C I + V
Sbjct: 482 C-IIRLPV 488
Score = 32.7 bits (74), Expect = 1.7
Identities = 20/151 (13%), Positives = 39/151 (25%), Gaps = 47/151 (31%)
Query: 2082 IEHSNLIPKCHSCQKCEESFDNCNNLWSHMFIK--HENSDFVCNLCPPDSKIVIKYVHLL 2139
+EH L+P SF + L F K E ++ P + L+
Sbjct: 16 LEHVLLVP--------TASFFIASQLQEQ-FNKILPEPTEGFAADDEPTTP-----AELV 61
Query: 2140 VRHMKKHHTMQLRISSVSKH----IKSKTQIFVDGAIHHSCQKCEESFDNCNNLWSHMFI 2195
+ + + L S + F E + N++ H
Sbjct: 62 GKFL--GYVSSLVEPSKVGQFDQVLNLCLTEF------------ENCYLEGNDI--HA-- 103
Query: 2196 KHENRDFVCNLCPPDSKIMIKYVHFVL--YF 2224
L ++ + ++ Y
Sbjct: 104 ------LAAKL-LQENDTTLVKTKELIKNYI 127
Score = 32.7 bits (74), Expect = 2.2
Identities = 43/275 (15%), Positives = 70/275 (25%), Gaps = 85/275 (30%)
Query: 328 PSS----FQRFNALQEHMLSHTGEKPYTCEACGKSFP--LKRRLNAHYNKWHLGKGYRCH 381
P++ +F L + + F L L + +L +G H
Sbjct: 54 PTTPAELVGKF-------LGYVSSL--VEPSKVGQFDQVLNLCLT-EFENCYL-EGNDIH 102
Query: 382 ICGSTMSNAANFKDHLDSHRGEKK-----Y--TCETCGTGF--AYKSSLYHHRFTHIKD- 431
+ AA D+ + K Y F S+L F + +
Sbjct: 103 ------ALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSAL----FRAVGEG 152
Query: 432 --RTYPC--------TYCE--RK-YQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNL 478
+ Y E R YQ+ L L + S + + +
Sbjct: 153 NAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDL-IKFSAET---LSELIRTTLDAEKV 208
Query: 479 LTH---IRT--HNTDRTH-------------------------VCELCNANLKTRRSLLR 508
T I N T +L RS L+
Sbjct: 209 FTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLK 268
Query: 509 HYTTHGTQL-AAIAFNNSQSSSSDHRLVKSEVQIL 542
T H L A+A + S S V+ + +L
Sbjct: 269 GATGHSQGLVTAVAIAETDSWESFFVSVRKAITVL 303
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Length = 46
Score = 51.7 bits (125), Expect = 1e-08
Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C+ CGK+F + +++L H R
Sbjct: 2 SSGSSGTGEKPYECKECGKAF----------------------------SQTTHLIQHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 VHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC CG S L H R+HTGEK
Sbjct: 3 SGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC CG S L H R+HTGEK
Sbjct: 3 SGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C CGK+F HL +H S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45
Score = 44.0 bits (105), Expect = 8e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C+ CGK F+Q H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C++CG +F+Q L H+ H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C++CG +F+Q L H+ H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C C K F + + +L H R
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTT-----------------------------HLIQHQR 33
Query: 1998 IHTGEKKYVC 2007
+HTGEK
Sbjct: 34 VHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C S+ L QH R+HTGEKP
Sbjct: 9 GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C+ CG +F L H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQH 31
Score = 38.6 bits (91), Expect = 5e-04
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C+ CGK+F L H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQH 31
Score = 36.3 bits (85), Expect = 0.003
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C +F + L++H ++H G
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 35.9 bits (84), Expect = 0.004
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F++ L H R HTG++P
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.005
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ CG F+ + L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.023
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C+ CG F + L H+ H+ E+ S
Sbjct: 7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.046
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C EC +++ + L +H VHTGEK S
Sbjct: 9 GEK-PYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.054
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y+C C +F + L +H HTGEKP +
Sbjct: 13 YECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSS 45
Score = 30.9 bits (71), Expect = 0.29
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C+ C F HL+QH R HT KP
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40
Score = 30.6 bits (70), Expect = 0.37
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC C K + ++I HQR VH KP
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.37
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC C K + ++I HQR VH KP
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQR-VHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F+ ++++H +VH+ E+P
Sbjct: 3 SGSSG-TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.50
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F L +H +RVH
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVH 35
Score = 29.8 bits (68), Expect = 0.81
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F L +H +RVH
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVH 35
Score = 27.9 bits (63), Expect = 4.3
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++C C F L +H++ H
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 27.1 bits (61), Expect = 6.2
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG ++ +L+ H ++H+ +P
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+C +C K +++ L H VH GE+ +
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 18/71 (25%), Positives = 23/71 (32%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
GEKP+ C CGK+F + S L +HMR
Sbjct: 2 SSGSSGAGEKPYGCSECGKAF----------------------------SSKSYLIIHMR 33
Query: 1339 NHTGEKKYVCE 1349
H+GEK
Sbjct: 34 THSGEKPSGPS 44
Score = 49.1 bits (118), Expect = 1e-07
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S KPY C CG SSK L H R H+GEK
Sbjct: 3 SGSS-GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S KPY C CG SSK L H R H+GEK
Sbjct: 3 SGSS-GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 47.2 bits (113), Expect = 4e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ GEK Y C CGK F+ + H THS E+ S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
GEK Y C +CG +F+ + L H +HS
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
GEK Y C +CG +F+ + L H +HS
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36
Score = 43.7 bits (104), Expect = 8e-06
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 9/42 (21%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCS 676
+ G++PY C CGK+F +K +L H S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 42.2 bits (100), Expect = 3e-05
Identities = 17/73 (23%), Positives = 22/73 (30%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F S L +HM
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKS-----------------------------YLIIHM 32
Query: 1997 RIHTGEKKYVCET 2009
R H+GEK +
Sbjct: 33 RTHSGEKPSGPSS 45
Score = 41.0 bits (97), Expect = 7e-05
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S GEKPY C CGK+F K L H + H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTHSGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F+ KS L H TH ++ +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GEK Y C CG +F L IH +H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 38.3 bits (90), Expect = 6e-04
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F KS L H +HS E+ S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F+ L +H+RTH+G++P
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C S L HMR H+GEKP
Sbjct: 9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F K L+ H + H G
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37
Score = 33.7 bits (78), Expect = 0.031
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y C C +F + L HM +H+GEKP +
Sbjct: 13 YGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.068
Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C CG F+++ ++ H + HS E+P
Sbjct: 3 SGSSG-AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.069
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +++ + S L H+ H+GEK S
Sbjct: 9 GEK-PYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.081
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y CS C K F K+ L H R
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR 33
Score = 32.1 bits (74), Expect = 0.097
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F + +L+ H RTH+ KP
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40
Score = 31.8 bits (73), Expect = 0.14
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + CS C F L H +TH
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 30.6 bits (70), Expect = 0.35
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ GEK + CS C + F K+ L H R H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTH 35
Score = 30.2 bits (69), Expect = 0.58
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C C K +++ +I H R H KP
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.58
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C C K +++ +I H R H KP
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMR-THSGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.86
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C K+F S L H R+H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIH-MRTH 35
Score = 27.9 bits (63), Expect = 3.3
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C EC K+F++K L H + H+
Sbjct: 7 GAGEKPYGCSECGKAFSSKSYLIIH-MRTHS 36
Score = 27.5 bits (62), Expect = 5.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y CS+C K ++ L H+ H GE+ +
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG ++++ L+ HM+ HS +P
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.2
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCE 494
G+ + C CG F ++ L+ H+RTH+ ++
Sbjct: 3 SGSSGA-GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.8
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K + C CGK+F K L HM HS +P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C+VC K+F T ++L H +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAF----------------------------TQKAHLAQHQK 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 THTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC C + K L H + HTGEK
Sbjct: 3 SGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC C + K L H + HTGEK
Sbjct: 3 SGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
TGEK Y C+ C +FTQ A L H+ +H+ +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45
Score = 45.2 bits (108), Expect = 3e-06
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C++C K FTQ A H+ TH+ E+ S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 3e-06
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C VC K+F K HL +H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQH 31
Score = 44.4 bits (106), Expect = 5e-06
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C+ C +FTQ A L H+ +H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 41.7 bits (99), Expect = 5e-05
Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C +C+K F + + +L H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKA-----------------------------HLAQHQ 32
Query: 1997 RIHTGEKKYVCE 2008
+ HTGEK
Sbjct: 33 KTHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C+ C K+F K L H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C+ C +F L H +H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C +C ++ L QH + HTGEKP
Sbjct: 9 GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C +C FT+ L H +THTG++P
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ C F K+ L H+ TH ++ +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.010
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C+ +F +K L +H K H G
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 34.8 bits (81), Expect = 0.014
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C++C F K+ L H+ +H+ E+ S
Sbjct: 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.029
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
G + Y+C C +F + L +H +HTGEKP
Sbjct: 9 GEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.070
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C C +++ + L +H HTGEK S
Sbjct: 9 GEK-PYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.11
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C VC + F K L +H ++ H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTH 35
Score = 31.3 bits (72), Expect = 0.19
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC +C K T + ++ HQ+ H KP
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.19
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC +C K T + ++ HQ+ H KP
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQK-THTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.29
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C+ C+ F + HL QH +THT KP
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40
Score = 31.0 bits (71), Expect = 0.31
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C +CSK F K L++H ++ H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTH 35
Score = 31.0 bits (71), Expect = 0.33
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C C F + ++ +H K H+ E+P
Sbjct: 3 SGSSG-TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.42
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ ++C C+ F L +H+KTH
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 29.0 bits (66), Expect = 1.2
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C +C K+F Q + L +H +++H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTH 35
Score = 27.5 bits (62), Expect = 5.0
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C C + + +L H K H+ +P
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C CSK+FT K L +H +K HT
Sbjct: 7 GTGEKPYECKVCSKAFTQKAHLAQH-QKTHT 36
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 1e-08
Identities = 18/69 (26%), Positives = 22/69 (31%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGE PF C CGK F T +NL +H +
Sbjct: 3 SGSSGTGENPFICSECGKVF----------------------------THKTNLIIHQKI 34
Query: 1340 HTGEKKYVC 1348
HTGE+
Sbjct: 35 HTGERPSGP 43
Score = 48.6 bits (117), Expect = 2e-07
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
P+ C CG + K +L H +IHTGE+
Sbjct: 3 SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 48.6 bits (117), Expect = 2e-07
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
P+ C CG + K +L H +IHTGE+
Sbjct: 3 SGS-SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGE ++C CGK FT + H+ H+ ER S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 9/42 (21%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCS 676
+ TG+ P+ C CGK F K +L H S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 43.6 bits (104), Expect = 8e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGE ++C +CG FT +L H+ H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 43.6 bits (104), Expect = 8e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGE ++C +CG FT +L H+ H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/71 (21%), Positives = 22/71 (30%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GE + C C KVF + NL +H
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKT-----------------------------NLIIHQ 32
Query: 1997 RIHTGEKKYVC 2007
+IHTGE+
Sbjct: 33 KIHTGERPSGP 43
Score = 41.3 bits (98), Expect = 7e-05
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGE ++C CG F H +L IH H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGE P+ C CGK F K L H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE + C CG F +K++L H+ H +R +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GE + C CG F +K++L H+ H+ ER S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+ C C +FT +L +H + HTG+RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE + C C + + +L H ++HTGE+P
Sbjct: 9 GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E P+IC C F K +L+ H KIH G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37
Score = 34.4 bits (80), Expect = 0.019
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE F C EC + + + + L H +HTGE+ S
Sbjct: 9 GEN-PFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 34.4 bits (80), Expect = 0.020
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ IC CG F + N++ H K+H+ ERP
Sbjct: 3 SGSSG-TGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.9 bits (76), Expect = 0.052
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE F+CS C + F K L H +++H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIH 35
Score = 32.5 bits (75), Expect = 0.075
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE + CS C K F K L H +++H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIH 35
Score = 32.1 bits (74), Expect = 0.10
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ C C K T++ N+I HQ+ +H +P
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQK-IHTGERPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ C C K T++ N+I HQ+ +H +P
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQK-IHTGERPSGP 43
Score = 31.3 bits (72), Expect = 0.19
Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
+ C C F L H HTGE+P
Sbjct: 13 FICSE--CGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 30.9 bits (71), Expect = 0.31
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ PF+C C F + +L+ H + HT +P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERP 40
Score = 29.8 bits (68), Expect = 0.81
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E F CS C F L H+K H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 29.4 bits (67), Expect = 0.92
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+ CS+C K +T L H +H GER +
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
+C+ CG + + NL+ H KIH+ RP
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G+ IC CG F + NL+ H + H +R
Sbjct: 3 SGSSGT-GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 28.6 bits (65), Expect = 2.3
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE C+ C K F + L H ++ H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIH 35
Score = 27.8 bits (63), Expect = 3.2
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
+GE F C EC K FT K L H +K+HT
Sbjct: 7 GTGENPFICSECGKVFTHKTNLIIH-QKIHT 36
Score = 27.5 bits (62), Expect = 5.9
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ + IC CGK F K L H +H+ RP
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 27.1 bits (61), Expect = 6.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+ C C +++T + H ++H+GER S
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 52.8 bits (127), Expect = 1e-08
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 307 RRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC--EACGKSF 359
+ + +R + C HPGC ++ + + L+ H +HTGEKP++C + C + F
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF 59
Score = 48.2 bits (115), Expect = 5e-07
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 621 DGVTKYKCHI--CDSIFTRYDSLRLHVRTHTGDRPYTCDV--CGKSFVAKKHLNRHY 673
+ + C C + + L+ H RTHTG++P++C C + F L+RH
Sbjct: 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69
Score = 46.2 bits (110), Expect = 2e-06
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 1257 EGETKYKC--PLCPSITSRYDSLQQHMRLHTGEKPFSCQV--CGKSFAAREHLKRHF 1309
+ C P C + L+ H R HTGEKPFSC C + FA + L RH
Sbjct: 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69
Score = 45.1 bits (107), Expect = 6e-06
Identities = 18/83 (21%), Positives = 25/83 (30%), Gaps = 28/83 (33%)
Query: 1276 SLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKV 1335
+ + C G CG+ SS+LK
Sbjct: 4 GSSGPQIDSSRIRSHICSHPG--------------------------CGKTYFKSSHLKA 37
Query: 1336 HMRNHTGEKKYVC--EICGKGFT 1356
H R HTGEK + C + C + F
Sbjct: 38 HTRTHTGEKPFSCSWKGCERRFA 60
Score = 44.7 bits (106), Expect = 7e-06
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 1971 HEKIRDFQCKV--CDRAFFDVYNLKLHMRIHTGEKKYVC--ETCGASFVHWGSLNIHNYS 2026
+IR C C + +F +LK H R HTGEK + C + C F L+ H +
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Query: 2027 H 2027
H
Sbjct: 72 H 72
Score = 43.1 bits (102), Expect = 3e-05
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 1777 KNHICEI--CGKSFKKKDLLREHMIVHSTLRPFLCEF--CNAGFKCRKHLLQHYRTH 1829
++HIC CGK++ K L+ H H+ +PF C + C F L +H RTH
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 40.1 bits (94), Expect = 3e-04
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 418 KSSLYHHRFTHIKDRTYPCTY--CERKYQSPKTLKEHLKVHTSGDVRHICQ--TCGSEFH 473
S + + R++ C++ C + Y LK H + HT G+ C C F
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-GEKPFSCSWKGCERRFA 60
Query: 474 TRKNLLTHIRTH 485
L H RTH
Sbjct: 61 RSDELSRHRRTH 72
Score = 39.7 bits (93), Expect = 5e-04
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 694 STNFKDHLDNHKGEKKYTCEI--CGTGFMYKSSLHHHKFSHSKERMFQCSF--CEKKYMS 749
S+ + + + C CG + S L H +H+ E+ F CS+ CE+++
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 750 PKTLKEHEQTH 760
L H +TH
Sbjct: 62 SDELSRHRRTH 72
Score = 38.9 bits (91), Expect = 0.001
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
Query: 751 KTLKEHEQTHRSGDIKHICD--TCGSEFNTRKNMLRHTKVHSTERPYICEY--CNVSFKE 806
+ S HIC CG + ++ HT+ H+ E+P+ C + C F
Sbjct: 3 SGSSGPQIDS-SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 807 KKSLVRHYKIH 817
L RH + H
Sbjct: 62 SDELSRHRRTH 72
Score = 38.5 bits (90), Expect = 0.001
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 243 KFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCSV--CQRGFFMKNRLNEHYKRVH 295
C P C ++Y S LK H HTGEK F CS C+R F + L+ H R H
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR-RTH 72
Score = 37.4 bits (87), Expect = 0.003
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCTM--CDKSFYQVSRLTEHYKRSH 1238
+ CS C KTY + LK H H GE+ SC+ C++ F + L+ H R+H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR-RTH 72
Score = 37.0 bits (86), Expect = 0.004
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 548 KYKC--PLCDRIYTSFSETKRHFEVHSGERKYTCSI--CSKCFFIKNRLSEHYRR 598
+ C P C + Y S K H H+GE+ ++CS C + F + LS H R
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Score = 37.0 bits (86), Expect = 0.005
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 1505 RSVHELLKPYECDTCGHGLSSKKS--LDDHYRIHTGEKKYVCQQ--CGASFTQWASLFYH 1560
+ ++ + C G G + KS L H R HTGEK + C C F + L H
Sbjct: 9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68
Query: 1561 KFSH 1564
+ +H
Sbjct: 69 RRTH 72
Score = 37.0 bits (86), Expect = 0.005
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 1629 RSVHELLKPYECDTCGHGLSSKKS--LDDHYRIHTGEKKYVCQQ--CGASFTQWASLFYH 1684
+ ++ + C G G + KS L H R HTGEK + C C F + L H
Sbjct: 9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68
Query: 1685 KFSH 1688
+ +H
Sbjct: 69 RRTH 72
Score = 33.9 bits (78), Expect = 0.049
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 1935 LKAHLDIHSGEKDYACHI--CNKVFVRHSTLENHMK 1968
LKAH H+GEK ++C C + F R L H +
Sbjct: 35 LKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70
Score = 33.5 bits (77), Expect = 0.081
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 376 KGYRCHI--CGSTMSNAANFKDHLDSHRGEKKYTC--ETCGTGFAYKSSLYHHRFTH 428
+ + C CG T +++ K H +H GEK ++C + C FA L HR TH
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 33.1 bits (76), Expect = 0.088
Identities = 19/97 (19%), Positives = 28/97 (28%), Gaps = 32/97 (32%)
Query: 640 SLRLHVRTHTGDRPYTCDV--CGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNF 697
+ R + C CGK++ HL
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHL---------------------------- 35
Query: 698 KDHLDNHKGEKKYTC--EICGTGFMYKSSLHHHKFSH 732
K H H GEK ++C + C F L H+ +H
Sbjct: 36 KAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 33.1 bits (76), Expect = 0.11
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 394 KDHLDSHRGEKKYTC--ETCGTGFAYKSSLYHHRFTHIKDRTYPCTY--CERKYQSPKTL 449
+ + C CG + S L H TH ++ + C++ CER++ L
Sbjct: 6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65
Query: 450 KEHLKVH 456
H + H
Sbjct: 66 SRHRRTH 72
Score = 32.7 bits (75), Expect = 0.14
Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 23/87 (26%)
Query: 1202 LKCHLMVHRGERTMSCTM--CDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGE 1259
+ R+ C+ C K++++ S L H R+H GE
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAH-TRTHT------------------GE 45
Query: 1260 TKYKC--PLCPSITSRYDSLQQHMRLH 1284
+ C C +R D L +H R H
Sbjct: 46 KPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 32.0 bits (73), Expect = 0.22
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 457 TSGDVRHIC--QTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRS--LLRHYTT 512
+S HIC CG + +L H RTH ++ C + RS L RH T
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Query: 513 H 513
H
Sbjct: 72 H 72
Score = 31.2 bits (71), Expect = 0.54
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 1743 KKHHTMQQRCVCSY--CGNSYANPGNLRTHMVVHSN-KNHIC--EICGKSFKKKDLLREH 1797
+ + + +CS+ CG +Y +L+ H H+ K C + C + F + D L H
Sbjct: 9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRH 68
Query: 1798 MIVH 1801
H
Sbjct: 69 RRTH 72
Score = 29.3 bits (66), Expect = 2.1
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 1794 LREHMIVHSTLRPFLCEF--CNAGFKCRKHLLQHYRTHT 1830
I S +R +C C + HL H RTHT
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT 43
Score = 28.5 bits (64), Expect = 3.8
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 1402 KHVCN--TCGNEYNTRKNLLSHMKIHSTGRPHQCDV--CNAKF 1440
H+C+ CG Y +L +H + H+ +P C C +F
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF 59
Score = 27.7 bits (62), Expect = 9.1
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 784 RHTKVHSTERPYICEY--CNVSFKEKKSLVRHYKIHKG 819
S R +IC + C ++ + L H + H G
Sbjct: 7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG 44
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.7 bits (125), Expect = 1e-08
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
G+K F C C K+F T SS+L VH R
Sbjct: 3 SGSSGAGKKLFKCNECKKTF----------------------------TQSSSLTVHQRI 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
K ++C+ C + SL H RIHTGEK
Sbjct: 3 SGS-SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
K ++C+ C + SL H RIHTGEK
Sbjct: 3 SGS-SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ G+K + C C K FTQ +S H+ H+ E+ S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
G+K + C +C +FTQ +SL H+ H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
G+K + C +C +FTQ +SL H+ H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G+K + C+ C K F + S +L +H
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSS-----------------------------SLTVHQ 32
Query: 1997 RIHTGEKKYVC 2007
RIHTGEK
Sbjct: 33 RIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G + + C+ C K+F L H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31
Score = 39.8 bits (94), Expect = 2e-04
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S G+K + C C K+F L H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
G+K + C C +F SL +H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G+ +KC C ++ SL H R+HTGEKP
Sbjct: 9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC+ C FT+ SL +H R HTG++P
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G+K + C C F SSL H+ H ++ +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 35.9 bits (84), Expect = 0.005
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ++ + C C +F + SL H +IH G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 35.9 bits (84), Expect = 0.005
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
G+K + C C F SSL H+ H+ E+ S
Sbjct: 7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.038
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G+K FKC EC +++ S L H +HTGEK S
Sbjct: 9 GKK-LFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.14
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C +F + ++L H HTGEKP +
Sbjct: 13 FKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.18
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ++ FKC+ C TF +LT H++ H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 30.9 bits (71), Expect = 0.26
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G++ + C+ C K F + L+ H +R+H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIH 35
Score = 30.9 bits (71), Expect = 0.28
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K+++C+ CKK T ++ HQR +H KP +
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGPSS 45
Score = 30.9 bits (71), Expect = 0.28
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K+++C+ CKK T ++ HQR +H KP +
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQR-IHTGEKPSGPSS 45
Score = 30.6 bits (70), Expect = 0.47
Identities = 11/38 (28%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + F C C F L H R HT KP
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKP 40
Score = 30.2 bits (69), Expect = 0.48
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ G+K F C+ C++ F + L H +R+H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIH 35
Score = 29.8 bits (68), Expect = 0.72
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G C+ C F ++ H ++H+ E+P
Sbjct: 3 SGSSG-AGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.73
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G++ C C K+F Q S LT H +R H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC++C KT+T+ L H +H GE+ +
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 2.2
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G+ F C+EC K+FT L H +++HT
Sbjct: 7 GAGKKLFKCNECKKTFTQSSSLTVH-QRIHT 36
Score = 27.9 bits (63), Expect = 4.1
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN C + +L H +IH+ +P
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP++C+ CGK+F S L+ H R
Sbjct: 3 SGSSGTGEKPYNCEECGKAF----------------------------IHDSQLQEHQRI 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 1e-07
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY C+ CG L +H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY C+ CG L +H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y CE CGK F + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 8e-06
Identities = 18/73 (24%), Positives = 23/73 (31%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F+ S L+ H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDS-----------------------------QLQEHQ 32
Query: 1997 RIHTGEKKYVCET 2009
RIHTGEK +
Sbjct: 33 RIHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ CGK+F+ L H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C++CG +F + L H+ H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C++CG +F + L H+ H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 41.7 bits (99), Expect = 5e-05
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y CE CG +F+H L H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEH 31
Score = 41.4 bits (98), Expect = 6e-05
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY CE CGK+F +L H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C LQ+H R+HTGEKP
Sbjct: 9 GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY CE C +F L H +IH G
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y CE CG F + S L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F L+ H R HTG++P
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y CE CG F++ S L H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.013
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y C C +F + LQEH HTGEKP +
Sbjct: 13 YNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS 45
Score = 34.8 bits (81), Expect = 0.014
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +++ + S+L++H +HTGEK S
Sbjct: 9 GEK-PYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.18
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F ++L EH +R+H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIH 35
Score = 31.0 bits (71), Expect = 0.26
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ CE C F L +H R HT KP
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40
Score = 31.0 bits (71), Expect = 0.28
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F + H ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.28
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F ++L EH +R+H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIH 35
Score = 29.8 bits (68), Expect = 0.66
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y C+ C K + + +HQR +H KP +
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGPSS 45
Score = 29.8 bits (68), Expect = 0.66
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y C+ C K + + +HQR +H KP +
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQR-IHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 0.96
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ +C C K+F S+L EH +R H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEH-QRIH 35
Score = 29.4 bits (67), Expect = 1.2
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + C C F L EH++ H
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 27.5 bits (62), Expect = 5.4
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE ++C+EC K+F L+EH +++HT
Sbjct: 7 GTGEKPYNCEECGKAFIHDSQLQEH-QRIHT 36
Score = 27.1 bits (61), Expect = 7.9
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K + CE CGK+F L+EH +H+ +P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 10.0
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + L H +IH+ +P
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 51.8 bits (125), Expect = 1e-08
Identities = 20/69 (28%), Positives = 21/69 (30%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TG+KPF C CGKSF NL H R
Sbjct: 3 SGSSGTGQKPFECTHCGKSF----------------------------RAKGNLVTHQRI 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKSGPS 43
Score = 49.8 bits (120), Expect = 6e-08
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP+EC CG +K +L H RIHTGEK
Sbjct: 3 SGS-SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 49.8 bits (120), Expect = 6e-08
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP+EC CG +K +L H RIHTGEK
Sbjct: 3 SGS-SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG+K + C CGK F + H+ H+ E+S S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 44.5 bits (106), Expect = 4e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG +P+ C CGKSF AK +L H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31
Score = 43.7 bits (104), Expect = 9e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG+K + C CG SF +L H+ H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 43.7 bits (104), Expect = 9e-06
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TG+K + C CG SF +L H+ H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/71 (22%), Positives = 20/71 (28%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G+K + C C K F NL H
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKG-----------------------------NLVTHQ 32
Query: 1997 RIHTGEKKYVC 2007
RIHTGEK
Sbjct: 33 RIHTGEKSGPS 43
Score = 40.6 bits (96), Expect = 9e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TG+KP+ C CGKSF K L H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG+K + C CG SF G+L H H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G+K + C CG F K +L H+ H +++ P +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G+ ++C C +L H R+HTGEK
Sbjct: 9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C F +L H R HTG++
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 36.8 bits (86), Expect = 0.003
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ++P+ C +C SF+ K +LV H +IH G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 36.4 bits (85), Expect = 0.004
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
G+K + C CG F K +L H+ H+ E+ S
Sbjct: 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 33.7 bits (78), Expect = 0.028
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + ++C H C SF+ L H HTGEK
Sbjct: 9 GQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSSG 45
Score = 33.3 bits (77), Expect = 0.044
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G+K F+C C +S+ L H +HTGEK S
Sbjct: 9 GQK-PFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 32.5 bits (75), Expect = 0.068
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K +EC C K + N++ HQR +H K
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPS 43
Score = 32.5 bits (75), Expect = 0.068
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K +EC C K + N++ HQR +H K
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQR-IHTGEKSGPS 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G C CG F + N++ H ++H+ E+
Sbjct: 3 SGSSG-TGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 31.4 bits (72), Expect = 0.22
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C C F+ + +L+ H R HT K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS 40
Score = 31.0 bits (71), Expect = 0.30
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG+K F C+ C + F K L H +R+H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIH 35
Score = 30.6 bits (70), Expect = 0.36
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ++ F+C++C +FR L H++ H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 29.8 bits (68), Expect = 0.68
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G++ + C+ C K F K L H +R+H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIH 35
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + + NL++H +IH+ +
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 28.7 bits (65), Expect = 1.7
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G++ CT C KSF L H +R H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIH 35
Score = 27.5 bits (62), Expect = 4.2
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
++C+ C K++ L H +H GE++ +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 27.5 bits (62), Expect = 5.5
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
T G C CG F + NL+TH R H
Sbjct: 3 SGSSGT-GQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 26.7 bits (60), Expect = 9.7
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G+ F C C KSF K L H +++HT
Sbjct: 7 GTGQKPFECTHCGKSFRAKGNLVTH-QRIHT 36
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 18/71 (25%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TG K F C CGK+F T S L +H +
Sbjct: 2 SSGSSGTGGKHFECTECGKAF----------------------------TRKSTLSMHQK 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 6e-08
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
K +EC CG + K +L H +IHTGEK
Sbjct: 3 SGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45
Score = 49.8 bits (120), Expect = 6e-08
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
K +EC CG + K +L H +IHTGEK
Sbjct: 3 SGS-SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45
Score = 44.8 bits (107), Expect = 3e-06
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 9/44 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSHA 678
+ TG + + C CGK+F K L+ H S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG 46
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG K + C CGK FT+ ++ H+ H+ E+ S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG K + C +CG +FT+ ++L H+ H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TG K + C +CG +FT+ ++L H+ H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 16/72 (22%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G K + C C K F R S L +H
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKS-----------------------------TLSMHQ 32
Query: 1997 RIHTGEKKYVCE 2008
+IHTGEK
Sbjct: 33 KIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TG K + C CGK+F K L+ H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH 31
Score = 39.0 bits (92), Expect = 3e-04
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TG K + C CG +F +L++H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH 31
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C FTR +L +H + HTG++P
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G ++C C +R +L H ++HTGEKP
Sbjct: 9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G K + C CG F KS+L H+ H ++ +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.005
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ + + C C +F K +L H KIH G
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
G K + C CG F KS+L H+ H+ E+ S
Sbjct: 7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.050
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G K F+C EC +++ S L H +HTGEK S
Sbjct: 9 GGK-HFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.056
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG KHF C+ C + F K+ L+ H +++H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH-QKIH 35
Score = 32.1 bits (74), Expect = 0.11
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
++C C +F R + L H HTGEKP
Sbjct: 13 FECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.12
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+G + + C+ C K F K+ LS H +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33
Score = 31.0 bits (71), Expect = 0.30
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K +EC C K T + + HQ+ +H KP
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.30
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K +EC C K T + + HQ+ +H KP
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQK-IHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.36
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G C CG F + + H K+H+ E+P
Sbjct: 3 SGSSG-TGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.48
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + + F+C+ C F TL+ H+K H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 29.8 bits (68), Expect = 0.81
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + F C C F + L H + HT KP
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP 40
Score = 29.4 bits (67), Expect = 0.98
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEH 1233
G + CT C K+F + S L+ H
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH 31
Score = 28.6 bits (65), Expect = 1.7
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
++C++C K +TR L H +H GE+ +
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 2.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G F C EC K+FT K L H +K+HT
Sbjct: 7 GTGGKHFECTECGKAFTRKSTLSMH-QKIHT 36
Score = 27.1 bits (61), Expect = 7.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + + L H KIH+ +P
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 17/70 (24%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK+F S+L +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAF----------------------------RARSSLAIHQA 33
Query: 1339 NHTGEKKYVC 1348
H+GEK
Sbjct: 34 THSGEKPSGP 43
Score = 49.5 bits (119), Expect = 8e-08
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG ++ SL H H+GEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 49.5 bits (119), Expect = 8e-08
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG ++ SL H H+GEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F +S H+ THS E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 43.7 bits (104), Expect = 9e-06
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG +F +SL H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 43.7 bits (104), Expect = 9e-06
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG +F +SL H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ CGK+F A+ L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/70 (21%), Positives = 20/70 (28%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C+ C K F S +L +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARS-----------------------------SLAIHQA 33
Query: 1998 IHTGEKKYVC 2007
H+GEK
Sbjct: 34 THSGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG +F SL IH +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK+F + L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIH 31
Score = 39.1 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C SL H H+GEKP
Sbjct: 9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F +SSL H+ TH ++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C F SL +H TH+G++P
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F +SSL H+ +HS E+ S
Sbjct: 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.005
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F+ + SL H H G
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37
Score = 32.9 bits (76), Expect = 0.053
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
YKC C +F+ ++L H +H+GEKP
Sbjct: 13 YKCNE--CGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.060
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC +++ S L H A H+GEK S
Sbjct: 9 GEK-PYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.100
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C FR +L H+ TH
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 30.6 bits (70), Expect = 0.35
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F ++ L+ H + H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIH-QATH 35
Score = 30.6 bits (70), Expect = 0.38
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C+ CG F R ++ H HS E+P
Sbjct: 3 SGSSG-TGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K R ++ HQ H KP
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQA-THSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K R ++ HQ H KP
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQA-THSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.56
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F ++ L H + H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIH-QATH 35
Score = 29.8 bits (68), Expect = 0.68
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F+ R L H TH+ KP
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKP 40
Score = 28.3 bits (64), Expect = 2.9
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S L H + +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIH-QATH 35
Score = 28.3 bits (64), Expect = 3.1
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + R +L H HS +P
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K + L H H GE+ +
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.0
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C+EC K+F + L H + H+
Sbjct: 7 GTGEKPYKCNECGKAFRARSSLAIH-QATHS 36
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.8 bits (125), Expect = 1e-08
Identities = 16/70 (22%), Positives = 20/70 (28%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGE+ + C CGK+F S L +H R
Sbjct: 2 SSGSSGTGERHYECSECGKAF----------------------------IQKSTLSMHQR 33
Query: 1339 NHTGEKKYVC 1348
H GEK
Sbjct: 34 IHRGEKPSGP 43
Score = 49.4 bits (119), Expect = 8e-08
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+ YEC CG K +L H RIH GEK
Sbjct: 3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 49.4 bits (119), Expect = 8e-08
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+ YEC CG K +L H RIH GEK
Sbjct: 3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGE+ Y C CGK F Q ++ H+ H E+ S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 45.2 bits (108), Expect = 3e-06
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 9/44 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSHA 678
+ TG+R Y C CGK+F+ K L+ H S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSSG 46
Score = 43.7 bits (104), Expect = 9e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGE+ Y C +CG +F Q ++L H+ H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 43.7 bits (104), Expect = 9e-06
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGE+ Y C +CG +F Q ++L H+ H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 41.4 bits (98), Expect = 7e-05
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 339 EHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGE+ Y C CGK+F K L+ H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 41.0 bits (97), Expect = 9e-05
Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GE+ Y C C K F++ S L +H R
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKS-----------------------------TLSMHQR 33
Query: 1998 IHTGEKKYVC 2007
IH GEK
Sbjct: 34 IHRGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGE+ Y C CG +F+ +L++H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMH 31
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE+ Y C CG F KS+L H+ H ++ +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C + +L H R+H GEKP
Sbjct: 9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F + +L +H R H G++P
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ER Y C C +F +K +L H +IH+G
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37
Score = 36.0 bits (84), Expect = 0.005
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GE+ Y C CG F+ KS+L H+ H E+ S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.040
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE+H+ CS C + F K+ L+ H +R+H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH-QRIH 35
Score = 32.5 bits (75), Expect = 0.079
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ ++C EC +++ S L H +H GEK S
Sbjct: 9 GER-HYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.11
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F + + H ++H E+P
Sbjct: 2 SSGSSG-TGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.17
Identities = 10/39 (25%), Positives = 13/39 (33%), Gaps = 2/39 (5%)
Query: 1796 EHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ R + C C F + L H R H KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKP 40
Score = 31.3 bits (72), Expect = 0.22
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GER Y CS C K F K+ LS H R
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQR 33
Score = 31.3 bits (72), Expect = 0.23
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y+C C +F + + L H H GEKP +
Sbjct: 13 YECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPSS 45
Score = 31.0 bits (71), Expect = 0.33
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ YEC C K + + HQR +H KP
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.33
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ YEC C K + + HQR +H KP
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQR-IHRGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.78
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GER C+ C K+F Q S L+ H +R H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMH-QRIH 35
Score = 29.4 bits (67), Expect = 0.96
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ER ++CS C F TL+ H++ H
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 28.3 bits (64), Expect = 2.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+CS+C K + + L H +HRGE+ +
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.3
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C EC K+F K L H +++H
Sbjct: 7 GTGERHYECSECGKAFIQKSTLSMH-QRIHR 36
Score = 26.7 bits (60), Expect = 8.2
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 451 EHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G+ + C CG F + L H R H ++
Sbjct: 2 SSGSSGT-GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.8
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG + + L H +IH +P
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 1e-08
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKPF C+ CG +F + S +L H+R
Sbjct: 2 SSGSSGTGEKPFQCKECGMNF----------------------------SWSCSLFKHLR 33
Query: 1339 NHTGEKKYVC 1348
+H
Sbjct: 34 SHERTDPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C+ CG F+ S + H +H S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 45.7 bits (109), Expect = 2e-06
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKC 1696
TGEK + C++CG +F+ SLF H SH T
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 45.7 bits (109), Expect = 2e-06
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETR 1568
TGEK + C++CG +F+ SLF H SH T
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 43.7 bits (104), Expect = 8e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++P+ C CG +F L +H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH 31
Score = 43.0 bits (102), Expect = 2e-05
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++C CG S SL H R H
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 43.0 bits (102), Expect = 2e-05
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++C CG S SL H R H
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 42.6 bits (101), Expect = 2e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP+ C+ CG +F L H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH 31
Score = 41.0 bits (97), Expect = 7e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C+ CG F + SL H SH + S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 41.0 bits (97), Expect = 8e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GEK + C+ CG F++ SL+ H +H +
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 40.3 bits (95), Expect = 1e-04
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C+ CG +F SL H SH
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 39.1 bits (92), Expect = 4e-04
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE ++C C S SL +H+R H P
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCD 657
++C C F+ SL H+R+H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 37.6 bits (88), Expect = 0.001
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCET 2009
FQCK C F +L H+R H +
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 36.4 bits (85), Expect = 0.004
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C+ C ++F SL +H + H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 35.6 bits (83), Expect = 0.007
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ F+C C M F +L +H ++H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 34.5 bits (80), Expect = 0.016
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F+C EC ++ L KHL H S
Sbjct: 9 GEK-PFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 34.1 bits (79), Expect = 0.021
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
++C C +F +L +H+ SH P
Sbjct: 13 FQCKE--CGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 32.9 bits (76), Expect = 0.053
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPKATNSFS 1839
+ +PF C+ C F L +H R+H + + S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 32.6 bits (75), Expect = 0.086
Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ C CG F+ ++ +H + H P
Sbjct: 3 SGSSG-TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 30.2 bits (69), Expect = 0.58
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE F C EC +F+ L +H + H
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKH-LRSHE 36
Score = 29.9 bits (68), Expect = 0.65
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ + C C F L +H R
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33
Score = 29.5 bits (67), Expect = 0.96
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F C C F L +H R H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH-LRSH 35
Score = 28.7 bits (65), Expect = 2.2
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCD 1434
C CG ++ +L H++ H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 28.3 bits (64), Expect = 2.6
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
C+ CG +F L +H+ H P
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 28.3 bits (64), Expect = 2.9
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 728 HKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
S + E+ FQC C + +L +H ++H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 27.5 bits (62), Expect = 4.7
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C +F L +H RSH
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH-LRSH 35
Score = 27.5 bits (62), Expect = 5.3
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
T G+ C+ CG F +L H+R+H
Sbjct: 3 SGSSGT-GEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 27.5 bits (62), Expect = 5.5
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
++C +C ++ L HL H
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 27.2 bits (61), Expect = 7.2
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K ++C C + ++ H RS HE P +
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGPSS 45
Score = 27.2 bits (61), Expect = 7.2
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K ++C C + ++ H RS HE P +
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRS-HERTDPSGPSS 45
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 1e-08
Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK F +S L H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKVF----------------------------RHNSYLSRHQR 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 8e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 9e-06
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C+ CGK F +L+RH S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45
Score = 43.7 bits (104), Expect = 1e-05
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
TGEK Y C +CG F + L H+ H+ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45
Score = 42.1 bits (100), Expect = 3e-05
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG F + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 29/71 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C+ C KVF +S L H R
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNS-----------------------------YLSRHQR 33
Query: 1998 IHTGEKKYVCE 2008
IHTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK F L+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + L +H R+HTGEKP
Sbjct: 9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG F H L+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRH 31
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +F L H R HTG++P
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C F+ L RH +IH G
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 36.7 bits (86), Expect = 0.003
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F + S L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.004
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F + S L H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.013
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + + S L +H +HTGEK S
Sbjct: 9 GEK-PYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.076
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
YKC C F+ + L H HTGEKP
Sbjct: 13 YKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.18
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 10/51 (19%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEE 1845
+ +P+ C C F+ +L +H R HT KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP--------SGPSS 45
Score = 31.3 bits (72), Expect = 0.22
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F + RH ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.29
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C FR L+ H++ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 30.2 bits (69), Expect = 0.54
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F + LS H +R+H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F + L+ H +R+H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K + + HQR +H KP
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K + + HQR +H KP
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQR-IHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 2.3
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F S L+ H +R H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRH-QRIH 35
Score = 27.9 bits (63), Expect = 3.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + L H +IH+ +P
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.5
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C+EC K F L H +++HT
Sbjct: 7 GTGEKPYKCNECGKVFRHNSYLSRH-QRIHT 36
Score = 27.1 bits (61), Expect = 7.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C +++ S RH +H+GE+ S
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 8.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K + L H +H GE+ +
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 1e-08
Identities = 16/70 (22%), Positives = 19/70 (27%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGE P+ C CGK+F + L H R
Sbjct: 2 SSGSSGTGENPYECHECGKAF----------------------------SRKYQLISHQR 33
Query: 1339 NHTGEKKYVC 1348
H GEK
Sbjct: 34 THAGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
PYEC CG S K L H R H GEK
Sbjct: 3 SGS-SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
PYEC CG S K L H R H GEK
Sbjct: 3 SGS-SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGE Y C CGK F++ H+ TH+ E+ S
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 44.8 bits (107), Expect = 4e-06
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG+ PY C CGK+F K L H S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45
Score = 43.7 bits (104), Expect = 1e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGE Y C +CG +F++ L H+ +H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 43.7 bits (104), Expect = 1e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGE Y C +CG +F++ L H+ +H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 40.2 bits (95), Expect = 1e-04
Identities = 16/70 (22%), Positives = 17/70 (24%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GE Y CH C K F R L H R
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKY-----------------------------QLISHQR 33
Query: 1998 IHTGEKKYVC 2007
H GEK
Sbjct: 34 THAGEKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGE PY C CGK+F K +L +H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISH 31
Score = 38.6 bits (91), Expect = 5e-04
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C SR L H R H GEKP
Sbjct: 9 GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+CH C F+R L H RTH G++P
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE Y C CG F+ K L H+ TH ++ +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGE Y C CG +F L H +H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E PY C C +F K L+ H + H G
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37
Score = 35.6 bits (83), Expect = 0.008
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GE Y C CG F K L H+ +H+ E+ S
Sbjct: 7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.039
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G Y+C C +F R L H +H GEKP +
Sbjct: 9 GENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSS 45
Score = 32.5 bits (75), Expect = 0.074
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE ++C EC +++ +L H H GEK S
Sbjct: 9 GEN-PYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.26
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
YEC C K + + +I HQR H KP
Sbjct: 11 NPYECHECGKAFSRKYQLISHQR-THAGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.26
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
YEC C K + + +I HQR H KP
Sbjct: 11 NPYECHECGKAFSRKYQLISHQR-THAGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.32
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ P+ C C F + L+ H RTH KP
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP 40
Score = 30.9 bits (71), Expect = 0.34
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE + C C + F K +L H +R H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISH-QRTH 35
Score = 30.2 bits (69), Expect = 0.54
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE Y C C K F K +L H +R H
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISH-QRTH 35
Score = 30.2 bits (69), Expect = 0.65
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E ++C C F L H++TH
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 29.8 bits (68), Expect = 0.89
Identities = 9/42 (21%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F+ + ++ H + H+ E+P
Sbjct: 3 SGSSG-TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+C +C K ++R Y+L H H GE+ +
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 29.0 bits (66), Expect = 1.5
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE C C K+F + +L H +R+H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISH-QRTH 35
Score = 26.7 bits (60), Expect = 9.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG ++ + L+SH + H+ +P
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 17/71 (23%), Positives = 22/71 (30%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK+F + S+L H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAF----------------------------SVRSSLTTHQA 33
Query: 1339 NHTGEKKYVCE 1349
HTG+K
Sbjct: 34 IHTGKKPSGPS 44
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPYEC+ CG S + SL H IHTG+K
Sbjct: 3 SGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPYEC+ CG S + SL H IHTG+K
Sbjct: 3 SGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F+ +S H+ H+ ++ S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C QCG +F+ +SL H+ H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C QCG +F+ +SL H+ H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C+ CGK+F + L H S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45
Score = 41.0 bits (97), Expect = 8e-05
Identities = 16/71 (22%), Positives = 20/71 (28%), Gaps = 29/71 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C+ C K F S +L H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRS-----------------------------SLTTHQA 33
Query: 1998 IHTGEKKYVCE 2008
IHTG+K
Sbjct: 34 IHTGKKPSGPS 44
Score = 40.2 bits (95), Expect = 2e-04
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG +F SL H H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK+F ++ L H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTH 31
Score = 39.1 bits (92), Expect = 3e-04
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C S SL H +HTG+KP
Sbjct: 9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F+ +SSL H+ H + +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C+ C F+ SL H HTG +P
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F + SL H IH G
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F +SSL H+ H+ ++ S
Sbjct: 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 32.5 bits (75), Expect = 0.076
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + Y+C C +F ++L H HTG+KP +
Sbjct: 9 GEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC+ C K + R ++ HQ +H KP
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC+ C K + R ++ HQ +H KP
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQA-IHTGKKPSGP 43
Score = 31.7 bits (73), Expect = 0.16
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C +C +++ S L H A+HTG+K S
Sbjct: 9 GEK-PYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 30.2 bits (69), Expect = 0.48
Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F+ R ++ H +H+ ++P
Sbjct: 3 SGSSG-TGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 29.8 bits (68), Expect = 0.66
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ Y C+ C K F +++ L+ H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33
Score = 29.8 bits (68), Expect = 0.84
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F R L H HT KP
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40
Score = 29.4 bits (67), Expect = 1.0
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F +++ L H + +H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIH 35
Score = 28.3 bits (64), Expect = 2.5
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S LT H + H
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIH 35
Score = 27.5 bits (62), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG ++ R +L +H IH+ +P
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 17/69 (24%), Positives = 21/69 (30%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TG KP+ C C K+F + S L VH R+
Sbjct: 3 SGSSGTGVKPYGCSQCAKTF----------------------------SLKSQLIVHQRS 34
Query: 1340 HTGEKKYVC 1348
HTG K
Sbjct: 35 HTGVKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+KPY C C S K L H R HTG K
Sbjct: 3 SGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+KPY C C S K L H R HTG K
Sbjct: 3 SGS-SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG K Y C C K F+ + H+ +H+ + S
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG K Y C QC +F+ + L H+ SH
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TG K Y C QC +F+ + L H+ SH
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG +PY C C K+F K L H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TG KPY C C K+F LK +L H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVH 31
Score = 41.4 bits (98), Expect = 6e-05
Identities = 15/73 (20%), Positives = 19/73 (26%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G K Y C C K F S L +H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKS-----------------------------QLIVHQ 32
Query: 1997 RIHTGEKKYVCET 2009
R HTG K +
Sbjct: 33 RSHTGVKPSGPSS 45
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG K Y C C +F L +H SH
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 39.1 bits (92), Expect = 4e-04
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G K Y C C F+ KS L H+ +H + +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 38.7 bits (91), Expect = 6e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F+ L +H R+HTG +P
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/35 (37%), Positives = 13/35 (37%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G Y C C S L H R HTG KP
Sbjct: 9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ +PY C C +F K L+ H + H G
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37
Score = 36.7 bits (86), Expect = 0.003
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
G K Y C C F KS L H+ SH+ + S
Sbjct: 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 33.7 bits (78), Expect = 0.033
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
GV+ Y C C +F + L H SHTG KP +
Sbjct: 9 GVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.059
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G K + C +C +++ S+L H HTG K S
Sbjct: 9 GVK-PYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 32.5 bits (75), Expect = 0.088
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG K + CS C + F +K++L H +R H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSH 35
Score = 32.1 bits (74), Expect = 0.12
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G + Y CS C+K F +K++L H +R H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSH 35
Score = 31.7 bits (73), Expect = 0.17
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ ++P+ C C F + L+ H R+HT KP
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP 40
Score = 31.3 bits (72), Expect = 0.22
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1520
K Y C C K + + +I HQR H +KP + G
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGP-SSG 46
Score = 31.3 bits (72), Expect = 0.22
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCG 1644
K Y C C K + + +I HQR H +KP + G
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQR-SHTGVKPSGP-SSG 46
Score = 31.0 bits (71), Expect = 0.26
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + + + CS CA TF L H+++H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 31.0 bits (71), Expect = 0.27
Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G + C C F+ + ++ H + H+ +P
Sbjct: 3 SGSSG-TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.4 bits (67), Expect = 0.98
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G + C+ C K+F S+L H +RSH
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSH 35
Score = 27.9 bits (63), Expect = 3.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y CS C KT++ +L H H G + +
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 27.5 bits (62), Expect = 5.0
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
+G + C +C+K+F+ K L H ++ HT
Sbjct: 7 GTGVKPYGCSQCAKTFSLKSQLIVH-QRSHT 36
Score = 27.5 bits (62), Expect = 5.0
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
T G + C C F + L+ H R+H +
Sbjct: 3 SGSSGT-GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
GEK + C VCGK F + SS+L+ H R
Sbjct: 3 SGSSGMGEKCYKCDVCGKEF----------------------------SQSSHLQTHQRV 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKPSGP 43
Score = 49.4 bits (119), Expect = 7e-08
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
K Y+CD CG S L H R+HTGEK
Sbjct: 3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 7e-08
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
K Y+CD CG S L H R+HTGEK
Sbjct: 3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ GEK Y C++CGK F+Q + H+ H+ E+ S
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 2e-06
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G++ Y CDVCGK F HL H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31
Score = 43.7 bits (104), Expect = 8e-06
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GEK Y C CG F+Q + L H+ H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 43.7 bits (104), Expect = 8e-06
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GEK Y C CG F+Q + L H+ H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
GEK Y C +C K F + S +L+ H R
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSS-----------------------------HLQTHQR 33
Query: 1998 IHTGEKKYVCET 2009
+HTGEK +
Sbjct: 34 VHTGEKPSGPSS 45
Score = 40.2 bits (95), Expect = 2e-04
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S GEK Y C+ CGK F L H + H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC +C S+ LQ H R+HTGEKP
Sbjct: 9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GEK Y C+ CG F L H H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC +C F++ L+ H R HTG++P
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C++CG F S L H+ H+ E+ S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ CG F+ S L H+ H ++ +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
E+ Y C+ C F + L H ++H G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 33.7 bits (78), Expect = 0.030
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F + + LQ H HTGEKP +
Sbjct: 13 YKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS 45
Score = 33.3 bits (77), Expect = 0.044
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC C + + S L+ H VHTGEK S
Sbjct: 9 GEK-CYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.11
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + C+ C F HL H R HT KP
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKP 40
Score = 31.7 bits (73), Expect = 0.13
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y+CD+C K+ + ++ HQR VH KP +
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.13
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y+CD+C K+ + ++ HQR VH KP +
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQR-VHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.14
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ GEK + C VC + F + L H +RVH
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35
Score = 31.3 bits (72), Expect = 0.24
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ G+ + CD CG EF+ ++ H +VH+ E+P
Sbjct: 3 SGSSG-MGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.25
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GE+ Y C +C K F + L H +RVH
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35
Score = 30.2 bits (69), Expect = 0.48
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C +C K F Q S L H +R H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTH-QRVH 35
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ E+ +KC C F L H++ H
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 28.3 bits (64), Expect = 2.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC C K +++ L+ H VH GE+ +
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 4.4
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG E++ +L +H ++H+ +P
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.3
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
GE + CD C K F+ L+ H +++HT
Sbjct: 7 GMGEKCYKCDVCGKEFSQSSHLQTH-QRVHT 36
Score = 26.7 bits (60), Expect = 9.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC +C + ++ S + H VH+GE+ S
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.3 bits (124), Expect = 2e-08
Identities = 18/71 (25%), Positives = 24/71 (33%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+GEKPF C+ CGK+F + +L H+R
Sbjct: 2 SSGSSGSGEKPFKCKECGKAF----------------------------RQNIHLASHLR 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 4e-07
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++C CG L H RIHTGEK
Sbjct: 3 SGS-SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++C CG L H RIHTGEK
Sbjct: 3 SGS-SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 43.6 bits (104), Expect = 9e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK + C+ CGK F Q H H+ E+ S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 9e-06
Identities = 17/73 (23%), Positives = 24/73 (32%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SGEK + C C K F ++ +L H+
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNI-----------------------------HLASHL 32
Query: 1997 RIHTGEKKYVCET 2009
RIHTGEK +
Sbjct: 33 RIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 1e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++P+ C CGK+F HL H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK + C++CG +F Q L H H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK + C++CG +F Q L H H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCH 381
S +GEKP+ C+ CGK+F L +H + H G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C + L H+R+HTGEKP
Sbjct: 9 GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC C F + L H+R HTG++P
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+GEK + C+ CG +F L H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASH 31
Score = 36.7 bits (86), Expect = 0.002
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+P+ C+ C +F++ L H +IH G
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
Score = 35.2 bits (82), Expect = 0.010
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C +F++ L H+ HTGEKP +
Sbjct: 13 FKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSS 45
Score = 34.8 bits (81), Expect = 0.014
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK + C+ CG F L H H+ E+ S
Sbjct: 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.022
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C+ CG F L H H ++ +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.029
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK FKC EC +++ L HL +HTGEK S
Sbjct: 9 GEK-PFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.086
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +PF C+ C F+ HL H R HT KP
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP 40
Score = 30.9 bits (71), Expect = 0.31
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ + C C K F L+ H R+H
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASH-LRIH 35
Score = 30.9 bits (71), Expect = 0.32
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ SG+ C CG F ++ H ++H+ E+P
Sbjct: 3 SGSSG-SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.42
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK F C C + F L H R+H
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASH-LRIH 35
Score = 29.8 bits (68), Expect = 0.72
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ FKC C FR L H + H
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 29.4 bits (67), Expect = 0.96
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K ++C C K ++ H R +H KP +
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 0.96
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K ++C C K ++ H R +H KP +
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLR-IHTGEKPSGPSS 45
Score = 27.5 bits (62), Expect = 5.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + +L SH++IH+ +P
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.7
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE F C EC K+F L H ++HT
Sbjct: 7 GSGEKPFKCKECGKAFRQNIHLASH-LRIHT 36
Score = 27.5 bits (62), Expect = 5.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC +C K + + L HL +H GE+ +
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 17/69 (24%), Positives = 23/69 (33%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEK ++C+ CGKSF + + L H R
Sbjct: 3 SGSSGTGEKLYNCKECGKSF----------------------------SRAPCLLKHERL 34
Query: 1340 HTGEKKYVC 1348
H+GEK
Sbjct: 35 HSGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
K Y C CG S L H R+H+GEK
Sbjct: 3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
K Y C CG S L H R+H+GEK
Sbjct: 3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C+ CGK F++ H+ HS E+ S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 44.1 bits (105), Expect = 7e-06
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
TGEK Y C++CG SF++ L H+ HS
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36
Score = 44.1 bits (105), Expect = 7e-06
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
TGEK Y C++CG SF++ L H+ HS
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36
Score = 43.7 bits (104), Expect = 1e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++ Y C CGKSF L +H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 16/71 (22%), Positives = 20/71 (28%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F R L H
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAP-----------------------------CLLKHE 32
Query: 1997 RIHTGEKKYVC 2007
R+H+GEK
Sbjct: 33 RLHSGEKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEK Y C+ CGKSF L H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C SR L +H RLH+GEKP
Sbjct: 9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C+ CG SF L H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH 31
Score = 37.9 bits (89), Expect = 9e-04
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ CG F+ L H H ++ +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F+R L H R H+G++P
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C+ CG F L H+ HS E+ S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+ Y C+ C SF L++H ++H G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 34.8 bits (81), Expect = 0.013
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +S+ L KH +H+GEK S
Sbjct: 9 GEK-LYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.019
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y C C SF R L +H H+GEKP +
Sbjct: 13 YNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.15
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + + C+ C F LL+H R H+ KP
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP 40
Score = 31.3 bits (72), Expect = 0.24
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F+ +L+H ++HS E+P
Sbjct: 3 SGSSG-TGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.31
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F L +H R+H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLH 35
Score = 30.2 bits (69), Expect = 0.60
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ +C C KSF + L +H +R H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLH 35
Score = 29.8 bits (68), Expect = 0.73
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F L +H +R+H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKH-ERLH 35
Score = 29.8 bits (68), Expect = 0.87
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K+Y C C K + ++ H+R +H KP
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.87
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K+Y C C K + ++ H+R +H KP
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHER-LHSGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.6
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + C C +F L +H++ H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 28.6 bits (65), Expect = 2.1
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE ++C EC KSF+ CL +H ++LH+
Sbjct: 7 GTGEKLYNCKECGKSFSRAPCLLKH-ERLHS 36
Score = 27.5 bits (62), Expect = 4.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG ++ LL H ++HS +P
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y C +C K+++R L H +H GE+ +
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.2
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ + K + C+ CGKSF + L +H +HS +P
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 17/71 (23%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TG KP+ C CGK+F + S+L H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAF----------------------------SVYSSLTTHQV 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+KPY C+ CG S SL H IHTGEK
Sbjct: 3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+KPY C+ CG S SL H IHTGEK
Sbjct: 3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG K Y+C CGK F+ ++S H+ H+ E+ S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 1e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG K Y+C +CG +F+ ++SL H+ H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 43.7 bits (104), Expect = 1e-05
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TG K Y+C +CG +F+ ++SL H+ H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 43.7 bits (104), Expect = 1e-05
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG +PY C+ CGK+F L H S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45
Score = 41.7 bits (99), Expect = 4e-05
Identities = 16/72 (22%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G K Y C+ C K F +S +L H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYS-----------------------------SLTTHQ 32
Query: 1997 RIHTGEKKYVCE 2008
IHTGEK
Sbjct: 33 VIHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 8e-05
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TG KPY C CGK+F + L H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTH 31
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TG K Y+C CG +F + SL H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G Y C C S Y SL H +HTGEKP
Sbjct: 9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ +PY+C C +F SL H IH G
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S G K Y C CG F+ SSL H+ H ++
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C+ C F+ Y SL H HTG++P
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ G K Y C CG F SSL H+ H+ E+ S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.015
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G K + C EC +++ +S L H +HTGEK S
Sbjct: 9 GVK-PYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.033
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
GV+ Y C C +F +++L H + HTGEKP
Sbjct: 9 GVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.30
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G + Y C+ C K F + + L+ H + +H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIH 35
Score = 30.6 bits (70), Expect = 0.37
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G ++C+ CG F+ ++ H +H+ E+P
Sbjct: 3 SGSSG-TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.76
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ ++P++C C F L H HT KP
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP 40
Score = 29.4 bits (67), Expect = 0.91
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG K ++C+ C + F + + L H + +H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C+ C K + ++ HQ +H KP
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C+ C K + ++ HQ +H KP
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQV-IHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.7
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G + C C K+F S LT H + H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIH 35
Score = 27.9 bits (63), Expect = 3.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG ++ +L +H IH+ +P
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G + C+EC K+F+ L H + +HT
Sbjct: 7 GTGVKPYMCNECGKAFSVYSSLTTH-QVIHT 36
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+GEKPF C+ CGK F T +S+L H R
Sbjct: 2 SSGSSGSGEKPFQCEECGKRF----------------------------TQNSHLHSHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 VHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++C+ CG + L H R+HTGEK
Sbjct: 2 SSGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++C+ CG + L H R+HTGEK
Sbjct: 2 SSGS-SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK + CE CGK FTQ + + H+ H+ E+ S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 44.5 bits (106), Expect = 5e-06
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++P+ C+ CGK F HL+ H
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSH 31
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK + C++CG FTQ + L H+ H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 44.1 bits (105), Expect = 7e-06
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK + C++CG FTQ + L H+ H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 41.0 bits (97), Expect = 9e-05
Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGEK + C C K F ++S +L H R
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNS-----------------------------HLHSHQR 33
Query: 1998 IHTGEKKYVCET 2009
+HTGEK +
Sbjct: 34 VHTGEKPSGPSS 45
Score = 40.6 bits (96), Expect = 1e-04
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 339 EHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCH 381
S +GEKP+ CE CGK F L++H + H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE ++C C ++ L H R+HTGEKP
Sbjct: 9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK + CE CG F L+ H H
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C FT+ L H R HTG++P
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + CE CG F S L+ H+ H ++ +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 36.8 bits (86), Expect = 0.003
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + CE CG F S LH H+ H+ E+ S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 36.0 bits (84), Expect = 0.004
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+P+ CE C F + L H ++H G
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 34.1 bits (79), Expect = 0.020
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F+C EC + + S L H VHTGEK S
Sbjct: 9 GEK-PFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.042
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
++C C F + + L H HTGEKP +
Sbjct: 13 FQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.067
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 1796 EHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +PF CE C F HL H R HT KP
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKP 40
Score = 32.1 bits (74), Expect = 0.12
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK F C C + F + L+ H +RVH
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVH 35
Score = 31.7 bits (73), Expect = 0.14
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ + C C K F + L H +RVH
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVH 35
Score = 31.4 bits (72), Expect = 0.21
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ C+ CG F ++ H +VH+ E+P
Sbjct: 2 SSGSSG-SGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.26
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K ++C+ C K+ T ++ HQR VH KP +
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGPSS 45
Score = 31.0 bits (71), Expect = 0.26
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K ++C+ C K+ T ++ HQR VH KP +
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQR-VHTGEKPSGPSS 45
Score = 29.1 bits (66), Expect = 1.4
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ F+C C F L H++ H
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 28.3 bits (64), Expect = 2.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
++C +C K +T+ L H VH GE+ +
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.9
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE F C+EC K FT L H +++HT
Sbjct: 7 GSGEKPFQCEECGKRFTQNSHLHSH-QRVHT 36
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GEKP+ C CGK+F + S L H R
Sbjct: 3 SGSSGSGEKPYGCNECGKTF----------------------------SQKSILSAHQRT 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 5e-08
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S KPY C+ CG S K L H R HTGEK
Sbjct: 3 SGSS-GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 5e-08
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S KPY C+ CG S K L H R HTGEK
Sbjct: 3 SGSS-GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK Y C CGK F+Q + H+ TH+ E+ S
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 3e-06
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
+GEK Y C +CG +F+Q + L H+ +H+ +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 5e-06
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++PY C+ CGK+F K L+ H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH 31
Score = 44.1 bits (105), Expect = 6e-06
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK Y C +CG +F+Q + L H+ +H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SGEK Y C+ C K F + S L H
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKS-----------------------------ILSAHQ 32
Query: 1997 RIHTGEKKYVCE 2008
R HTGEK
Sbjct: 33 RTHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 7e-05
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S +GEKPY C CGK+F K L+AH + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK Y C CG +F L+ H +H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F+ KS L H+ TH ++ +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 6e-04
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C+ C F++ L H RTHTG++P
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C S+ L H R HTGEKP
Sbjct: 9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F KS L H+ +H+ E+ S
Sbjct: 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY C C +F +K L H + H G
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37
Score = 33.3 bits (77), Expect = 0.038
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +++ S L H HTGEK S
Sbjct: 9 GEK-PYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.063
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
Y C C +F + + L H +HTGEKP
Sbjct: 13 YGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.12
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ + C+ C TF L+ H++TH
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 31.3 bits (72), Expect = 0.19
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ SG+ + C+ CG F+ + + H + H+ E+P
Sbjct: 3 SGSSG-SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.35
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ Y C+ C K F K+ LS H +R H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTH 35
Score = 30.6 bits (70), Expect = 0.46
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK + C+ C + F K+ L+ H +R H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTH 35
Score = 30.2 bits (69), Expect = 0.53
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P+ C C F + L H RTHT KP
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40
Score = 30.2 bits (69), Expect = 0.62
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C+ C K + + + HQR H KP
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQR-THTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.62
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C+ C K + + + HQR H KP
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQR-THTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.97
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F Q S L+ H +R+H
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTH 35
Score = 28.3 bits (64), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C+EC K+F+ K L H ++ HT
Sbjct: 7 GSGEKPYGCNECGKTFSQKSILSAH-QRTHT 36
Score = 26.7 bits (60), Expect = 9.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y C++C KT+++ L H H GE+ +
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.4 bits (124), Expect = 2e-08
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGKSF S+L H R
Sbjct: 2 SSGSSGTGEKPYICNECGKSF----------------------------IQKSHLNRHRR 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 2e-07
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S KPY C+ CG K L+ H RIHTGEK
Sbjct: 3 SGSS-GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 2e-07
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S KPY C+ CG K L+ H RIHTGEK
Sbjct: 3 SGSS-GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y+C CGK F Q + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ CGKSF+ K HLNRH
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH 31
Score = 45.2 bits (108), Expect = 2e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
TGEK Y+C +CG SF Q + L H+ H+ +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45
Score = 43.7 bits (104), Expect = 8e-06
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y+C +CG SF Q + L H+ H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C K F++ S +L H
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKS-----------------------------HLNRHR 32
Query: 1997 RIHTGEKKYVCE 2008
RIHTGEK
Sbjct: 33 RIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 6e-05
Identities = 17/29 (58%), Positives = 17/29 (58%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGKSF K LN H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y+C CG SF+ LN H H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C + L +H R+HTGEKP
Sbjct: 9 GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F KS L HR H ++ +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 0.002
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C+ C F + L H R HTG++P
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F+ KS L+ H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.004
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PYIC C SF +K L RH +IH G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 34.0 bits (79), Expect = 0.022
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +S+ S L +H +HTGEK S
Sbjct: 9 GEK-PYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.035
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK ++C+ C + F K+ LN H +R+H
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIH 35
Score = 33.3 bits (77), Expect = 0.050
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
Y C C SF + + L H HTGEKP
Sbjct: 13 YICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.22
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 10/51 (19%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNSFSSSKCEE 1845
+ +P++C C F + HL +H R HT KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKP--------SGPSS 45
Score = 30.9 bits (71), Expect = 0.28
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ +IC+ CG F + ++ RH ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.40
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F K+ L+ H RR+H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIH 35
Score = 30.2 bits (69), Expect = 0.59
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + C+ C +F L H++ H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 29.8 bits (68), Expect = 0.74
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C KSF Q S L H +R H
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIH 35
Score = 29.0 bits (66), Expect = 1.6
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C+ C K + ++ H+R +H KP
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.6
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C+ C K + ++ H+R +H KP
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRR-IHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 3.0
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 92 KHVRDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ +GE + C+EC KSF K L H +++HT
Sbjct: 2 SSGS-SGTGEKPYICNECGKSFIQKSHLNRH-RRIHT 36
Score = 27.5 bits (62), Expect = 5.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y C++C K++ + L H +H GE+ +
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 8.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + + +L H +IH+ +P
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 51.0 bits (123), Expect = 2e-08
Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
KPY C CG L H R+H+GEK
Sbjct: 3 SGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 51.0 bits (123), Expect = 2e-08
Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
KPY C CG L H R+H+GEK
Sbjct: 3 SGS-SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 51.0 bits (123), Expect = 2e-08
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP++C+ CGKSF +S L H R
Sbjct: 3 SGSSGTGEKPYNCKECGKSF----------------------------RWASCLLKHQRV 34
Query: 1340 HTGEKKYVCE 1349
H+GEK
Sbjct: 35 HSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 6e-07
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
TGEK Y C++CG SF + L H+ HS +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 46.0 bits (110), Expect = 1e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C+ CGK F + H+ HS E+ S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 45.3 bits (108), Expect = 2e-06
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
TGEK Y C++CG SF + L H+ HS
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36
Score = 42.2 bits (100), Expect = 3e-05
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C CGKSF L +H
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH 31
Score = 41.4 bits (98), Expect = 7e-05
Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F S L H
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWAS-----------------------------CLLKHQ 32
Query: 1997 RIHTGEKKYVCE 2008
R+H+GEK
Sbjct: 33 RVHSGEKPSGPS 44
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C+ CG SF L H
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C+ CGKSF L H + H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVHSGEKPSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C SF+ L++H ++H G
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37
Score = 38.7 bits (91), Expect = 4e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C L +H R+H+GEKP
Sbjct: 9 GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C+ CG F + S L H+ HS E+ S
Sbjct: 7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 38.7 bits (91), Expect = 6e-04
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C+ CG F + S L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F L H R H+G++P
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.034
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
Y C C SF+ + L +H H+GEKP
Sbjct: 13 YNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.036
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK + C EC +S+ S L KH VH+GEK S
Sbjct: 9 GEK-PYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 32.2 bits (74), Expect = 0.10
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F + L +H +RVH
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVH 35
Score = 31.8 bits (73), Expect = 0.16
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C CG F +L+H +VHS E+P
Sbjct: 3 SGSSG-TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.34
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C+ C F+ LL+H R H+ KP
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP 40
Score = 30.6 bits (70), Expect = 0.35
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y C C K ++ HQR VH KP
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.35
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y C C K ++ HQR VH KP
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQR-VHSGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.44
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ + C C +FR L +H++ H
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 29.8 bits (68), Expect = 0.67
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F + L +H +RVH
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVH 35
Score = 29.5 bits (67), Expect = 1.1
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ +C C KSF S L +H +R H
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKH-QRVH 35
Score = 27.5 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE ++C EC KSF CL +H +++H+
Sbjct: 7 GTGEKPYNCKECGKSFRWASCLLKH-QRVHS 36
Score = 27.1 bits (61), Expect = 6.8
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + LL H ++HS +P
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y C C + + S +H VHSGE+ S
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.7
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K + C+ CGKSF+ L +H VHS +P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 2e-08
Identities = 16/69 (23%), Positives = 20/69 (28%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GEKP+ C CGK + +L H R
Sbjct: 3 SGSSGSGEKPYKCVECGKGY----------------------------KRRLDLDFHQRV 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKLSGP 43
Score = 49.5 bits (119), Expect = 7e-08
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C CG G + LD H R+HTGEK
Sbjct: 2 SSGS-SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 49.5 bits (119), Expect = 7e-08
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C CG G + LD H R+HTGEK
Sbjct: 2 SSGS-SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 46.4 bits (111), Expect = 1e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK Y C CGKG+ + +H+ H+ E+ S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++PY C CGK + + L+ H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK Y C +CG + + L +H+ H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK Y C +CG + + L +H+ H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GEKPY C CGK + + L+ H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH 31
Score = 41.7 bits (99), Expect = 5e-05
Identities = 17/71 (23%), Positives = 21/71 (29%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SGEK Y C C K + R +L H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRL-----------------------------DLDFHQ 32
Query: 1997 RIHTGEKKYVC 2007
R+HTGEK
Sbjct: 33 RVHTGEKLSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK Y C CG + L+ H H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCD 657
YKC C + R L H R HTG++
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 38.7 bits (91), Expect = 6e-04
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C R L H R+HTGEK
Sbjct: 9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG G+ + L H+ H ++ +
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG G+ + L H+ H+ E++ S
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 36.0 bits (84), Expect = 0.005
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY C C +K + L H ++H G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37
Score = 34.0 bits (79), Expect = 0.020
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C ++R L H HTGEK +
Sbjct: 13 YKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSS 45
Score = 34.0 bits (79), Expect = 0.022
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + Y +L H VHTGEK S
Sbjct: 9 GEK-PYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 33.7 bits (78), Expect = 0.034
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK + C C +G+ + L+ H +RVH
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P+ C C G+K R L H R HT K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL 40
Score = 31.3 bits (72), Expect = 0.19
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ + C CG + R ++ H +VH+ E+
Sbjct: 3 SGSSG-SGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 31.0 bits (71), Expect = 0.25
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ Y C C K + + L H +RVH
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35
Score = 30.6 bits (70), Expect = 0.43
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECD 1517
K Y+C C K R ++ HQR VH K
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPS 44
Score = 30.6 bits (70), Expect = 0.43
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECD 1641
K Y+C C K R ++ HQR VH K
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQR-VHTGEKLSGPS 44
Score = 29.4 bits (67), Expect = 1.1
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K + + L H +R H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVH 35
Score = 29.0 bits (66), Expect = 1.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC +C K Y R +L H VH GE+ +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 28.7 bits (65), Expect = 1.7
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ +KC C ++ L H++ H
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 28.7 bits (65), Expect = 2.1
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQCD 1434
C CG Y R +L H ++H+ +
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 27.9 bits (63), Expect = 4.2
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C EC K + + L H +++HT
Sbjct: 7 GSGEKPYKCVECGKGYKRRLDLDFH-QRVHT 36
Score = 27.1 bits (61), Expect = 7.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + Y + H VH+GE+ S
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 51.1 bits (123), Expect = 2e-08
Identities = 17/70 (24%), Positives = 21/70 (30%), Gaps = 26/70 (37%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKPF+C G CG + S L H R+
Sbjct: 3 SGSSGTGEKPFACTWPG--------------------------CGWRFSRSDELSRHRRS 36
Query: 1340 HTGEKKYVCE 1349
H+G K
Sbjct: 37 HSGVKPSGPS 46
Score = 45.0 bits (107), Expect = 3e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + + C PGC F R + L H SH+G KP +
Sbjct: 9 GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47
Score = 41.5 bits (98), Expect = 5e-05
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 1336 HMRNHTGEKKYVC--EICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C CG F++ H+ +HS + S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 41.5 bits (98), Expect = 6e-05
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 644 HVRTHTGDRPYTCDV--CGKSFVAKKHLNRHY 673
+ TG++P+ C CG F L+RH
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHR 34
Score = 40.7 bits (96), Expect = 1e-04
Identities = 14/75 (18%), Positives = 19/75 (25%), Gaps = 31/75 (41%)
Query: 1937 AHLDIHSGEKDYACH--ICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKL 1994
+ +GEK +AC C F R L
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSD-----------------------------ELSR 32
Query: 1995 HMRIHTGEKKYVCET 2009
H R H+G K +
Sbjct: 33 HRRSHSGVKPSGPSS 47
Score = 40.7 bits (96), Expect = 1e-04
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 1258 GETKYKC--PLCPSITSRYDSLQQHMRLHTGEKPFSCQ 1293
GE + C P C SR D L +H R H+G KP
Sbjct: 9 GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 39.2 bits (92), Expect = 4e-04
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 626 YKCH--ICDSIFTRYDSLRLHVRTHTGDRPYTCD 657
+ C C F+R D L H R+H+G +P
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 36.9 bits (86), Expect = 0.003
Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 1503 HQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTGEKKYVCQ 1545
S KP+ C CG S L H R H+G K
Sbjct: 3 SGSS-GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 36.9 bits (86), Expect = 0.003
Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 1627 HQRSVHELLKPYECD--TCGHGLSSKKSLDDHYRIHTGEKKYVCQ 1669
S KP+ C CG S L H R H+G K
Sbjct: 3 SGSS-GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 35.7 bits (83), Expect = 0.006
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 1656 HYRIHTGEKKYVCQQ--CGASFTQWASLFYHKFSHSETRNQKCE 1697
TGEK + C CG F++ L H+ SHS +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 35.7 bits (83), Expect = 0.007
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 785 HTKVHSTERPYICEY--CNVSFKEKKSLVRHYKIHKGV 820
+ E+P+ C + C F L RH + H GV
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGV 40
Score = 35.4 bits (82), Expect = 0.007
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 340 HMLSHTGEKPYTC--EACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKP+ C CG F L+ H H G K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS-HSGVKPSGP 45
Score = 34.6 bits (80), Expect = 0.017
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1532 HYRIHTGEKKYVCQQ--CGASFTQWASLFYHKFSHS 1565
TGEK + C CG F++ L H+ SHS
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38
Score = 33.8 bits (78), Expect = 0.028
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 396 HLDSHRGEKKYTC--ETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C CG F+ L HR +H + +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.8 bits (78), Expect = 0.028
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 700 HLDNHKGEKKYTC--EICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C CG F L H+ SHS + S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.4 bits (77), Expect = 0.036
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F C P C + EL +H H+G K S
Sbjct: 9 GEK-PFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 31.9 bits (73), Expect = 0.14
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 549 YKC--PLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+ C P C ++ E RH HSG + S
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.0 bits (68), Expect = 0.63
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 3/45 (6%)
Query: 1769 THMVVHSN-KNHIC--EICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ + K C CG F + D L H HS ++P
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 30.0 bits (68), Expect = 0.64
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 1797 HMIVHSTLRPFLCEF--CNAGFKCRKHLLQHYRTHTKPK 1833
+ +PF C + C F L +H R+H+ K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 29.6 bits (67), Expect = 1.1
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 728 HKFSHSKERMFQCSF--CEKKYMSPKTLKEHEQTHRSGDIKHICDT 771
S + E+ F C++ C ++ L H ++H SG +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH-SGVKPSGPSS 47
Score = 28.8 bits (65), Expect = 1.7
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 756 HEQTHRSGDIKHICD--TCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ C CG F+ + RH + HS +P
Sbjct: 3 SGSSG-TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 28.8 bits (65), Expect = 1.7
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 1187 YKCS--DCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+ C+ C ++R EL H H G + +
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 27.3 bits (61), Expect = 5.6
Identities = 10/45 (22%), Positives = 14/45 (31%), Gaps = 3/45 (6%)
Query: 452 HLKVHTSGDVRHICQ--TCGSEFHTRKNLLTHIRTHNTDRTHVCE 494
T G+ C CG F L H R+H+ +
Sbjct: 3 SGSSGT-GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 26.9 bits (60), Expect = 9.5
Identities = 7/46 (15%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Query: 424 HRFTHIKDRTYPCTY--CERKYQSPKTLKEHLKVHTSGDVRHICQT 467
+ ++ + CT+ C ++ L H + H+ G +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS-GVKPSGPSS 47
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.9 bits (123), Expect = 2e-08
Identities = 18/71 (25%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGEKP+ C CGK F +S+L H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVF----------------------------RRNSHLARHQL 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 1e-06
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C CG L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 1e-06
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C CG L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F + + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 1e-05
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C CGK F HL RH
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARH 31
Score = 43.2 bits (103), Expect = 1e-05
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y CH C KVF R+S +L H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNS-----------------------------HLARHQ 32
Query: 1997 RIHTGEKKYVCET 2009
IHTGEK +
Sbjct: 33 LIHTGEKPSGPSS 45
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG F + + L H+ H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG F + + L H+ H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCH 381
S TGEKPY C CGK F L H H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + R L +H +HTGEKP
Sbjct: 9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C F+ L RH IH G
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/29 (37%), Positives = 11/29 (37%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG F L H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARH 31
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKCH C +F R L H HTG++P
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.020
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F S L H+ H+ E+ S
Sbjct: 7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.021
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.034
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F+R + L H L HTGEKP +
Sbjct: 13 YKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSS 45
Score = 33.2 bits (77), Expect = 0.043
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + S L +H +HTGEK S
Sbjct: 9 GEK-PYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.19
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F+ HL +H HT KP
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP 40
Score = 30.1 bits (69), Expect = 0.55
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F + L H + +H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIH 35
Score = 30.1 bits (69), Expect = 0.58
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F + L+ H + +H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIH 35
Score = 29.8 bits (68), Expect = 0.71
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C CG F ++ RH +H+ E+P
Sbjct: 3 SGSSG-TGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.74
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC C FR L H+ H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 28.6 bits (65), Expect = 1.8
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F + S L H + H
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARH-QLIH 35
Score = 28.6 bits (65), Expect = 2.1
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C C K ++ HQ +H KP
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.1
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C C K ++ HQ +H KP
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQL-IHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.3
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG + +L H IH+ +P
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC +C K + R L H ++H GE+ +
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 51.0 bits (123), Expect = 2e-08
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP C+ CGKSF + +S L VH R
Sbjct: 3 SGSSGTGEKPHECRECGKSF----------------------------SFNSQLIVHQRI 34
Query: 1340 HTGEKKYVC 1348
HTGE
Sbjct: 35 HTGENPSGP 43
Score = 49.5 bits (119), Expect = 7e-08
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP+EC CG S L H RIHTGE
Sbjct: 3 SGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 49.5 bits (119), Expect = 7e-08
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP+EC CG S L H RIHTGE
Sbjct: 3 SGS-SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C CGK F+ + H+ H+ E S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 43.7 bits (104), Expect = 1e-05
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++P+ C CGKSF L H S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C++CG SF+ + L H+ H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C++CG SF+ + L H+ H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 40.6 bits (96), Expect = 9e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKP+ C CGKSF +L H + H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 16/70 (22%), Positives = 20/70 (28%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK + C C K F +S L +H R
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNS-----------------------------QLIVHQR 33
Query: 1998 IHTGEKKYVC 2007
IHTGE
Sbjct: 34 IHTGENPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C CG SF L +H H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE ++C C S L H R+HTGE P
Sbjct: 9 GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 37.9 bits (89), Expect = 9e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C CG F++ S L H+ H + +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C C SF L+ H +IH G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C CG F + S L H+ H+ E S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 36.4 bits (85), Expect = 0.003
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C F+ L +H R HTG+ P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 33.3 bits (77), Expect = 0.039
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +C EC +S+ S+L H +HTGE S
Sbjct: 9 GEK-PHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 32.1 bits (74), Expect = 0.12
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
++C C SF + L H HTGE P +
Sbjct: 13 HECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSS 45
Score = 31.4 bits (72), Expect = 0.21
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
+GE+ + C C K F ++L H R
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33
Score = 31.0 bits (71), Expect = 0.28
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P C C F L+ H R HT P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP 40
Score = 30.6 bits (70), Expect = 0.41
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K +EC C K + +I HQR +H P
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQR-IHTGENPSGP 43
Score = 30.6 bits (70), Expect = 0.41
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K +EC C K + +I HQR +H P
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQR-IHTGENPSGP 43
Score = 29.8 bits (68), Expect = 0.77
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK C C + F ++L H +R+H
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVH-QRIH 35
Score = 29.8 bits (68), Expect = 0.81
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ H C CG F+ ++ H ++H+ E P
Sbjct: 3 SGSSG-TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 29.0 bits (66), Expect = 1.6
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +C C +F L H++ H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 27.5 bits (62), Expect = 4.5
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C KSF S+L H +R H
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVH-QRIH 35
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 50.6 bits (122), Expect = 3e-08
Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 28/67 (41%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
GEKP+ C CGK+F + +L VH+R
Sbjct: 2 SSGSSGGEKPYRCDQCGKAF----------------------------SQKGSLIVHIRV 33
Query: 1340 HTGEKKY 1346
HTG
Sbjct: 34 HTGSGPS 40
Score = 49.1 bits (118), Expect = 1e-07
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
KPY CD CG S K SL H R+HTG
Sbjct: 2 SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 49.1 bits (118), Expect = 1e-07
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
KPY CD CG S K SL H R+HTG
Sbjct: 2 SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 47.2 bits (113), Expect = 4e-07
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GEK Y C QCG +F+Q SL H H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 47.2 bits (113), Expect = 4e-07
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GEK Y C QCG +F+Q SL H H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 44.5 bits (106), Expect = 4e-06
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G++PY CD CGK+F K L H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30
Score = 43.3 bits (103), Expect = 9e-06
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
+ GEK Y C+ CGK F+Q S H H+
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 42.9 bits (102), Expect = 1e-05
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GEK Y C+ CG +F GSL +H H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S GEKPY C+ CGK+F K L H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH 30
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/69 (20%), Positives = 19/69 (27%), Gaps = 29/69 (42%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
GEK Y C C K F + +L +H+
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKG-----------------------------SLIVHI 31
Query: 1997 RIHTGEKKY 2005
R+HTG
Sbjct: 32 RVHTGSGPS 40
Score = 39.1 bits (92), Expect = 4e-04
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFS 1291
GE Y+C C S+ SL H+R+HTG P S
Sbjct: 8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYT 655
Y+C C F++ SL +H+R HTG P +
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 37.2 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C+ C +F +K SL+ H ++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 36.4 bits (85), Expect = 0.003
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
S GEK Y C+ CG F+ K SL H H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 34.5 bits (80), Expect = 0.016
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
+ GEK Y C+ CG F K SL H H+
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 31.8 bits (73), Expect = 0.14
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYT 351
G + Y+C C +F + +L H+ HTG P +
Sbjct: 8 GEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 31.4 bits (72), Expect = 0.22
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GE+ Y C C K F K L H RVH
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVH 34
Score = 31.0 bits (71), Expect = 0.25
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
GEK + C C + F K L H RVH
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVH 34
Score = 31.0 bits (71), Expect = 0.29
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+P+ C+ C F + L+ H R HT P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39
Score = 30.6 bits (70), Expect = 0.34
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F Q L H R H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVH-IRVH 34
Score = 30.6 bits (70), Expect = 0.39
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPY 795
+ G+ + CD CG F+ + +++ H +VH+ P
Sbjct: 2 SSGSS-GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 30.2 bits (69), Expect = 0.42
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK ++C +C +++ L H+ VHTG
Sbjct: 8 GEK-PYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 29.1 bits (66), Expect = 1.1
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ E+ ++C C F +L H + H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 28.7 bits (65), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
GE + CD+C K+F+ K L H ++HT
Sbjct: 6 SGGEKPYRCDQCGKAFSQKGSLIVH-IRVHT 35
Score = 28.3 bits (64), Expect = 2.6
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1514
K Y CD C K + + ++I H R VH P
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPS 40
Score = 28.3 bits (64), Expect = 2.6
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1638
K Y CD C K + + ++I H R VH P
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIR-VHTGSGPS 40
Score = 27.5 bits (62), Expect = 4.0
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
G+ + C CG F + +L+ HIR H
Sbjct: 2 SSGSSG-GEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 27.1 bits (61), Expect = 6.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
Y+C C K +++ L H+ VH G
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSG 38
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.6 bits (122), Expect = 3e-08
Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+GEKP+ C CGK+F ++L H R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAF----------------------------HRHTHLNEHRR 33
Query: 1339 NHTGEKKYVCE 1349
HTG +
Sbjct: 34 IHTGYRPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
KPY+C CG L++H RIHTG +
Sbjct: 3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
KPY+C CG L++H RIHTG +
Sbjct: 3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45
Score = 44.8 bits (107), Expect = 3e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK Y C CGK F + H+ H+ R S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++PY C CGK+F HLN H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 18/71 (25%), Positives = 21/71 (29%), Gaps = 29/71 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGEK Y C C K F RH+ +L H R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHT-----------------------------HLNEHRR 33
Query: 1998 IHTGEKKYVCE 2008
IHTG +
Sbjct: 34 IHTGYRPSGPS 44
Score = 41.7 bits (99), Expect = 4e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK Y C +CG +F + L H+ H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK Y C +CG +F + L H+ H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 40.2 bits (95), Expect = 1e-04
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S +GEKPY C CGK+F LN H + H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIHTGYRPSGP 43
Score = 39.0 bits (92), Expect = 3e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C R+ L +H R+HTG +P
Sbjct: 9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK Y C CG +F LN H H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 36.7 bits (86), Expect = 0.003
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C F R+ L H R HTG RP
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY C C +F L H +IH G
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37
Score = 35.9 bits (84), Expect = 0.005
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F + L HR H R +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F + L+ H+ H+ R S
Sbjct: 7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 33.2 bits (77), Expect = 0.049
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C +F R L EH HTG +P +
Sbjct: 13 YKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSS 45
Score = 32.5 bits (75), Expect = 0.073
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC +++ + L +H +HTG + S
Sbjct: 9 GEK-PYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 32.1 bits (74), Expect = 0.12
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK + CS C + F LNEH +R+H
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIH 35
Score = 32.1 bits (74), Expect = 0.13
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ Y CS C K F L+EH RR+H
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIH 35
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P+ C C F HL +H R HT +P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP 40
Score = 30.9 bits (71), Expect = 0.29
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C K+F++ + L EH +R H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIH 35
Score = 30.5 bits (70), Expect = 0.36
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ SG+ + C CG F+ ++ H ++H+ RP
Sbjct: 3 SGSSG-SGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 30.5 bits (70), Expect = 0.36
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ +KCS C F L EH++ H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 28.2 bits (64), Expect = 2.4
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C C K ++ +H+R +H +P
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGP 43
Score = 28.2 bits (64), Expect = 2.4
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C C K ++ +H+R +H +P
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRR-IHTGYRPSGP 43
Score = 28.2 bits (64), Expect = 3.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG ++ +L H +IH+ RP
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 27.5 bits (62), Expect = 5.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKCS+C K + R L H +H G R +
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 26.7 bits (60), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C EC K+F L EH +++HT
Sbjct: 7 GSGEKPYKCSECGKAFHRHTHLNEH-RRIHT 36
Score = 26.7 bits (60), Expect = 9.5
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLCE 1810
+ S K + C CGK+F + L EH +H+ RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 50.2 bits (121), Expect = 4e-08
Identities = 16/69 (23%), Positives = 19/69 (27%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GEKP+ C CGK+F S L VH R
Sbjct: 3 SGSSGSGEKPYECNECGKAF----------------------------IWKSLLIVHERT 34
Query: 1340 HTGEKKYVC 1348
H G
Sbjct: 35 HAGVSGPSS 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S KPYEC+ CG K L H R H G
Sbjct: 3 SGSS-GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S KPYEC+ CG K L H R H G
Sbjct: 3 SGSS-GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+ +GEK Y C CGK F + H+ TH+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 44.1 bits (105), Expect = 5e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK Y C +CG +F + L H+ +H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 44.1 bits (105), Expect = 5e-06
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+GEK Y C +CG +F + L H+ +H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++PY C+ CGK+F+ K L H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH 31
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GEKPY C CGK+F K L H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH 31
Score = 40.6 bits (96), Expect = 9e-05
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK Y C CG +F+ L +H +H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 39.4 bits (93), Expect = 2e-04
Identities = 15/71 (21%), Positives = 19/71 (26%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SGEK Y C+ C K F+ S L +H
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKS-----------------------------LLIVHE 32
Query: 1997 RIHTGEKKYVC 2007
R H G
Sbjct: 33 RTHAGVSGPSS 43
Score = 37.9 bits (89), Expect = 9e-04
Identities = 15/41 (36%), Positives = 16/41 (39%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GEK Y C CG F +KS L H TH
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/35 (31%), Positives = 12/35 (34%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C L H R H G S
Sbjct: 9 GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C+ C F L +H RTH G +
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
+ GEK Y C CG F++KS L H+ +H+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 35.2 bits (82), Expect = 0.008
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY C C +F K L+ H + H G
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 31.0 bits (71), Expect = 0.24
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y+C C +F + L H +H G +
Sbjct: 13 YECNE--CGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 31.0 bits (71), Expect = 0.26
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
SGE+ Y C+ C K F K+ L H R
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER 33
Score = 31.0 bits (71), Expect = 0.31
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
S +P+ C C F + L+ H RTH
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36
Score = 31.0 bits (71), Expect = 0.32
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK + C+ C + F K+ L H +R H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTH 35
Score = 30.2 bits (69), Expect = 0.60
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVC 274
GEK ++C EC +++ S L H H G
Sbjct: 9 GEK-PYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.4 bits (67), Expect = 1.00
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ + C+ CG F + ++ H + H+
Sbjct: 3 SGSSG-SGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S L H +R+H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTH 35
Score = 28.3 bits (64), Expect = 2.2
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC+ C K + +I H+R H +
Sbjct: 11 KPYECNECGKAFIWKSLLIVHER-THAGVSGPSS 43
Score = 28.3 bits (64), Expect = 2.2
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC+ C K + +I H+R H +
Sbjct: 11 KPYECNECGKAFIWKSLLIVHER-THAGVSGPSS 43
Score = 28.3 bits (64), Expect = 2.3
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + + L+ H + H+
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 27.5 bits (62), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C+EC K+F K L H ++ H
Sbjct: 7 GSGEKPYECNECGKAFIWKSLLIVH-ERTHA 36
Score = 27.1 bits (61), Expect = 6.7
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVC 493
+ G+ + C CG F + L+ H RTH
Sbjct: 3 SGSSGS-GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 26.7 bits (60), Expect = 9.7
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+C++C K + L H H G S
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 4e-08
Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+GE+P+ C CGK+F HL H++
Sbjct: 2 SSGSSGSGERPYGCNECGKNFGRHSHLIE----------------------------HLK 33
Query: 1339 NHTGEKKYVC 1348
H EK
Sbjct: 34 RHFREKSSGP 43
Score = 46.4 bits (111), Expect = 1e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GE+ Y C CGK F + + H H E+S S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 45.2 bits (108), Expect = 3e-06
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G+RPY C+ CGK+F HL H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH 31
Score = 44.0 bits (105), Expect = 6e-06
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+PY C+ CG L +H + H EK
Sbjct: 3 SGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 44.0 bits (105), Expect = 6e-06
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+PY C+ CG L +H + H EK
Sbjct: 3 SGS-SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 44.0 bits (105), Expect = 7e-06
Identities = 16/72 (22%), Positives = 22/72 (30%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGE+ Y C+ C K F RHS +L H++
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHS-----------------------------HLIEHLK 33
Query: 1998 IHTGEKKYVCET 2009
H EK +
Sbjct: 34 RHFREKSSGPSS 45
Score = 42.9 bits (102), Expect = 2e-05
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKC 1696
+GE+ Y C +CG +F + + L H H ++
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GE+ Y C +CG +F + + L H H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36
Score = 41.3 bits (98), Expect = 5e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C R+ L +H++ H EK
Sbjct: 9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S +GE+PY C CGK+F L H K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE+ Y C CG F S L H H ++++ +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 39.4 bits (93), Expect = 3e-04
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ + C EC +++G S L +HL H EK S
Sbjct: 9 GER-PYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GE+ Y C CG F S L H H +E+ S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S ERPY C C +F L+ H K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37
Score = 37.9 bits (89), Expect = 0.001
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C+ C F R+ L H++ H ++
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GE+ Y C CG +F L H H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G R Y C C +F R + L EH+ H EK +
Sbjct: 9 GERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSS 45
Score = 33.3 bits (77), Expect = 0.047
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
S RP+ C C F HL++H + H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36
Score = 32.9 bits (76), Expect = 0.059
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ + C+ CG F +++ H K H E+
Sbjct: 3 SGSSG-SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.1 bits (74), Expect = 0.099
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S ER + C+ C F L EH K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 31.7 bits (73), Expect = 0.16
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y C++C K + R L HL H E++ +
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 31.3 bits (72), Expect = 0.19
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GER C C K+F + S L EH + H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRH 35
Score = 31.3 bits (72), Expect = 0.23
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GE+ + C+ C + F + L EH + H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRH 35
Score = 31.3 bits (72), Expect = 0.24
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGER Y C+ C K F + L EH + H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRH 35
Score = 30.9 bits (71), Expect = 0.29
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L+ H+K H +
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 98 HSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C+EC K+F L EH K H
Sbjct: 7 GSGERPYGCNECGKNFGRHSHLIEH-LKRHF 36
Score = 28.3 bits (64), Expect = 2.6
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 1770 HMVVHS-NKNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
S + + C CGK+F + L EH+ H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 28.3 bits (64), Expect = 2.6
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y C C + + S H + H E+ S
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 27.1 bits (61), Expect = 6.0
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
+ Y C+ C K ++I+H + H K +
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGPSS 45
Score = 27.1 bits (61), Expect = 6.0
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
+ Y C+ C K ++I+H + H K +
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLK-RHFREKSSGPSS 45
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.3 bits (121), Expect = 5e-08
Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK+F D+S+ H R
Sbjct: 3 SGSSGTGEKPYKCMECGKAF----------------------------GDNSSCTQHQRL 34
Query: 1340 HTGEKKYVCE 1349
HTG++
Sbjct: 35 HTGQRPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C CG S H R+HTG++
Sbjct: 3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C CG S H R+HTG++
Sbjct: 3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 44.9 bits (107), Expect = 4e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F +S H+ H+ +R S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 43.0 bits (102), Expect = 1e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCE 1697
TGEK Y C +CG +F +S H+ H+ R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 43.0 bits (102), Expect = 2e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG +F +S H+ H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 42.6 bits (101), Expect = 2e-05
Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 9/44 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSHA 678
+ TG++PY C CGK+F +H S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG 46
Score = 42.2 bits (100), Expect = 3e-05
Identities = 14/72 (19%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C C K F +S + H
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNS-----------------------------SCTQHQ 32
Query: 1997 RIHTGEKKYVCE 2008
R+HTG++
Sbjct: 33 RLHTGQRPSGPS 44
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C S QH RLHTG++P
Sbjct: 9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK+F H + H G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLHTGQRPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 12/33 (36%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG +F S H H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 37.9 bits (89), Expect = 9e-04
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F SS H+ H R +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 37.6 bits (88), Expect = 0.002
Identities = 13/31 (41%), Positives = 13/31 (41%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C F S H R HTG RP
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 37.2 bits (87), Expect = 0.002
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F SS H+ H+ +R S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F + S +H ++H G
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37
Score = 34.9 bits (81), Expect = 0.012
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + YKC C +F ++ +H HTG++P +
Sbjct: 9 GEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSS 45
Score = 34.9 bits (81), Expect = 0.014
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC +++G+ S +H +HTG++ S
Sbjct: 9 GEK-PYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 31.0 bits (71), Expect = 0.24
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C CG F + +H ++H+ +RP
Sbjct: 3 SGSSG-TGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 30.6 bits (70), Expect = 0.42
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F QH R HT +P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP 40
Score = 29.9 bits (68), Expect = 0.65
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC C F + T+H++ H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 29.9 bits (68), Expect = 0.73
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C C K + + HQR +H +P
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGP 43
Score = 29.9 bits (68), Expect = 0.73
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C C K + + HQR +H +P
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQR-LHTGQRPSGP 43
Score = 29.5 bits (67), Expect = 0.91
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F S T+H +R H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35
Score = 29.5 bits (67), Expect = 1.0
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C C + F + +H +R+H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35
Score = 29.5 bits (67), Expect = 1.0
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C C K F + ++H +R+H
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLH 35
Score = 27.9 bits (63), Expect = 3.4
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + + H ++H+ RP
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 26.8 bits (60), Expect = 8.1
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C + + S +H +H+G+R S
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 50.2 bits (121), Expect = 5e-08
Identities = 19/71 (26%), Positives = 22/71 (30%), Gaps = 28/71 (39%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGE+P C CGKSF S++L H R
Sbjct: 2 SSGSSGTGERPHKCNECGKSF----------------------------IQSAHLIQHQR 33
Query: 1339 NHTGEKKYVCE 1349
HTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
+P++C+ CG L H RIHTGEK
Sbjct: 3 SGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
+P++C+ CG L H RIHTGEK
Sbjct: 3 SGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG+RP+ C+ CGKSF+ HL +H S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGE+ + C CGK F Q A H+ H+ E+ S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGE+ + C +CG SF Q A L H+ H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGE+ + C +CG SF Q A L H+ H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 40.2 bits (95), Expect = 1e-04
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 29/71 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GE+ + C+ C K F++ + +L H R
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSA-----------------------------HLIQHQR 33
Query: 1998 IHTGEKKYVCE 2008
IHTGEK
Sbjct: 34 IHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGE+P+ C CGKSF L H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 38.3 bits (90), Expect = 6e-04
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C + L QH R+HTGEKP
Sbjct: 9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGE+ + C CG SF+ L H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQH 31
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ERP+ C C SF + L++H +IH G
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE+ + C CG F + L H+ H ++ +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC+ C F + L H R HTG++P
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GE+ + C CG F+ + L H+ H+ E+ S
Sbjct: 7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.044
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ KC EC +S+ + L +H +HTGEK S
Sbjct: 9 GER-PHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.070
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G R +KC C SF + L +H HTGEKP +
Sbjct: 9 GERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.14
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ RP C C F HL+QH R HT KP
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40
Score = 31.3 bits (72), Expect = 0.21
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GER + C+ C K F L +H +R+H
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQH-QRIH 35
Score = 31.3 bits (72), Expect = 0.24
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ H C+ CG F ++++H ++H+ E+P
Sbjct: 3 SGSSG-TGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.69
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE+ C+ C + F L +H +R+H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQH-QRIH 35
Score = 29.8 bits (68), Expect = 0.72
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ ++C+ C K ++I HQR +H KP
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.72
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ ++C+ C K ++I HQR +H KP
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQR-IHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 2.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ER KC+ C +F L +H++ H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 27.1 bits (61), Expect = 6.9
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC++C K++ + L H +H GE+ +
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.0
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L+ H +IH+ +P
Sbjct: 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 5e-08
Identities = 19/70 (27%), Positives = 23/70 (32%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK+F + +S L H R
Sbjct: 3 SGSSGTGEKPYKCNECGKAF----------------------------SQTSKLARHQRI 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 1e-07
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG S L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG S L H RIHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK F+Q + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 4e-06
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C+ CGK+F L RH S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG +F+Q + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG +F+Q + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK Y C+ C K F + S L H R
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTS-----------------------------KLARHQR 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKPY C CGK+F +L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARH 31
Score = 39.0 bits (92), Expect = 3e-04
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG +F L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARH 31
Score = 39.0 bits (92), Expect = 3e-04
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C S+ L +H R+HTGEKP
Sbjct: 9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F+ S L H+ H ++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C +F + L RH +IH G
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C F++ L H R HTG++P
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F S L H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.053
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + YKC C +F + + L H HTGEKP +
Sbjct: 9 GEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.066
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC +++ S+L +H +HTGEK S
Sbjct: 9 GEK-PYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.29
Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F+ + RH ++H+ E+P
Sbjct: 3 SGSSG-TGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.38
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F ++L+ H +R+H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIH 35
Score = 30.6 bits (70), Expect = 0.40
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F ++L H +R+H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIH 35
Score = 30.2 bits (69), Expect = 0.59
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F L +H R HT KP
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40
Score = 29.4 bits (67), Expect = 0.93
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K + + HQR +H KP
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.93
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K + + HQR +H KP
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQR-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C F L H++ H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 28.6 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K+F Q S+L H +R H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIH 35
Score = 27.5 bits (62), Expect = 5.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG ++ L H +IH+ +P
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGP 43
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 49.8 bits (120), Expect = 5e-08
Identities = 16/70 (22%), Positives = 18/70 (25%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
GE+ C CGK F +SN H R
Sbjct: 2 SSGSSGHGERGHRCSDCGKFF----------------------------LQASNFIQHRR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 1e-06
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S + + C CG + H RIHTGEK
Sbjct: 3 SGSS-GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 1e-06
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S + + C CG + H RIHTGEK
Sbjct: 3 SGSS-GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 6e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ GE+ + C CGK F Q ++ H+ H+ E+ S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 44.1 bits (105), Expect = 7e-06
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G+R + C CGK F+ + +H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH 31
Score = 41.0 bits (97), Expect = 7e-05
Identities = 16/72 (22%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
GE+ + C C K F++ S N H R
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQAS-----------------------------NFIQHRR 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 40.6 bits (96), Expect = 1e-04
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GE+ + C CG F Q ++ H+ H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GE+ + C CG F Q ++ H+ H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S GE+ + C CGK F H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH 31
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE ++C C + + QH R+HTGEKP
Sbjct: 9 GERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
ER + C C F + + ++H +IH G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GE+ + C CG F+ S+ H+ H+ E+ S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE+ + C CG F S+ HR H ++ +
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
GE+ + C CG F+ + H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH 31
Score = 36.0 bits (84), Expect = 0.004
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++C C F + + H R HTG++P
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.016
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ G+ H C CG F N ++H ++H+ E+P
Sbjct: 3 SGSSG-HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.016
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ +C +C + + S +H +HTGEK S
Sbjct: 9 GER-GHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.035
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ GE+ CS C + F + +H +R+H
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35
Score = 32.1 bits (74), Expect = 0.12
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GER + CS C K F + +H RR+H
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35
Score = 31.4 bits (72), Expect = 0.24
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
++C C F + + +H HTGEKP +
Sbjct: 13 HRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPSS 45
Score = 31.0 bits (71), Expect = 0.27
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ ER +CS C F +H++ H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 31.0 bits (71), Expect = 0.28
Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KPKATNS 1837
R C C F + +QH R HT KP +S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 0.97
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GER C+ C K F Q S +H +R H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
+ + C C K N I H+R +H KP
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
+ + C C K N I H+R +H KP
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRR-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.5
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 95 RDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ GE C +C K F +H +++HT
Sbjct: 4 GSSGHGERGHRCSDCGKFFLQASNFIQH-RRIHT 36
Score = 28.7 bits (65), Expect = 1.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
++CSDC K + + H +H GE+
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 27.5 bits (62), Expect = 4.5
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
G+ H C CG F N + H R H
Sbjct: 3 SGSSGH-GERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 27.5 bits (62), Expect = 4.6
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 1392 HKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
+ + H C+ CG + N + H +IH+ +P
Sbjct: 3 SGSSG--HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 5e-08
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK F T +S+L H R
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----------------------------TQNSHLANHQRI 34
Query: 1340 HTGEKKYVCE 1349
HTG K
Sbjct: 35 HTGVKPSGPS 44
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + L +H RIHTG K
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + L +H RIHTG K
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 44.4 bits (106), Expect = 5e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FTQ + H+ H+ + S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 44.0 bits (105), Expect = 7e-06
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++PY C+ CGK F HL H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C KVF ++S +L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLANHQ 32
Query: 1997 RIHTGEKKYVCET 2009
RIHTG K +
Sbjct: 33 RIHTGVKPSGPSS 45
Score = 39.4 bits (93), Expect = 3e-04
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRCH 381
S TGEKPY C CGK F L H + H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + ++ L H R+HTG KP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/29 (37%), Positives = 11/29 (37%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TGEK Y C CG F L H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANH 31
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +FT+ L H R HTG +P
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C F + L H +IH G
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37
Score = 36.0 bits (84), Expect = 0.005
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S L +H+ H + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F S L +H+ H+ + S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 32.9 bits (76), Expect = 0.051
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F + + L H HTG KP +
Sbjct: 13 YKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.052
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + S L H +HTG K S
Sbjct: 9 GEK-PYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 31.3 bits (72), Expect = 0.22
Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F ++ H ++H+ +P
Sbjct: 3 SGSSG-TGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 31.0 bits (71), Expect = 0.26
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F + L+ H +R+H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIH 35
Score = 31.0 bits (71), Expect = 0.29
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F + L H +R+H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIH 35
Score = 30.6 bits (70), Expect = 0.37
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F HL H R HT KP
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP 40
Score = 30.6 bits (70), Expect = 0.40
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y+C+ C K T ++ +HQR +H +KP +
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGPSS 45
Score = 30.6 bits (70), Expect = 0.40
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y+C+ C K T ++ +HQR +H +KP +
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQR-IHTGVKPSGPSS 45
Score = 29.0 bits (66), Expect = 1.3
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C F L H++ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 28.6 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F Q S L H +R H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIH 35
Score = 27.9 bits (63), Expect = 4.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L +H +IH+ +P
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 27.1 bits (61), Expect = 6.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K +T+ L H +H G + +
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 26.7 bits (60), Expect = 9.8
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C+EC K FT L H +++HT
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLANH-QRIHT 36
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 49.9 bits (120), Expect = 5e-08
Identities = 16/69 (23%), Positives = 19/69 (27%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP C CGK+F S L +H R
Sbjct: 3 SGSSGTGEKPCKCTECGKAF----------------------------CWKSQLIMHQRT 34
Query: 1340 HTGEKKYVC 1348
H +K
Sbjct: 35 HVDDKHSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK C CGK F + H+ TH +++ S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 46.0 bits (110), Expect = 2e-06
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S KP +C CG K L H R H +K
Sbjct: 3 SGSS-GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 46.0 bits (110), Expect = 2e-06
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S KP +C CG K L H R H +K
Sbjct: 3 SGSS-GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 42.9 bits (102), Expect = 2e-05
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG++P C CGK+F K L H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31
Score = 41.4 bits (98), Expect = 6e-05
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP C CGK+F K +L H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMH 31
Score = 41.0 bits (97), Expect = 9e-05
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK C CG F +KS L H+ TH+ D+ +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK C CG F +KS L H+ +H ++ S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK C +CG +F + L H+ +H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK C +CG +F + L H+ +H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/71 (18%), Positives = 17/71 (23%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK C C K F S L +H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKS-----------------------------QLIMHQ 32
Query: 1997 RIHTGEKKYVC 2007
R H +K
Sbjct: 33 RTHVDDKHSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
KC C F L +H RTH D+
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK C CG +F L +H +H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK KC EC +++ S+L H H +KH S
Sbjct: 9 GEK-PCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 37.2 bits (87), Expect = 0.002
Identities = 10/35 (28%), Positives = 11/35 (31%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE KC C L H R H +K
Sbjct: 9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 34.5 bits (80), Expect = 0.015
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P C C +F K L+ H + H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD 37
Score = 33.7 bits (78), Expect = 0.030
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
KC C +F + L H +H +K +
Sbjct: 13 CKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSS 45
Score = 33.7 bits (78), Expect = 0.036
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK C+ C + F K++L H +R H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTH 35
Score = 32.5 bits (75), Expect = 0.071
Identities = 7/42 (16%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ C CG F + ++ H + H ++
Sbjct: 3 SGSSG-TGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.4 bits (72), Expect = 0.24
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ C+ C K F K++L H +R H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTH 35
Score = 31.0 bits (71), Expect = 0.26
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1474 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S SS + +K +C C K + +I HQR H K
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGP 43
Score = 31.0 bits (71), Expect = 0.26
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S SS + +K +C C K + +I HQR H K
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVDDKHSGP 43
Score = 30.2 bits (69), Expect = 0.49
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ KC+ C F L H++TH
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 29.1 bits (66), Expect = 1.2
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
KC++C K + +L H H ++ +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 29.1 bits (66), Expect = 1.3
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ CT C K+F S+L H +R+H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTH 35
Score = 29.1 bits (66), Expect = 1.6
Identities = 10/38 (26%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P C C F + L+ H RTH K
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH 40
Score = 28.7 bits (65), Expect = 1.9
Identities = 6/31 (19%), Positives = 11/31 (35%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG + + L+ H + H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 28.7 bits (65), Expect = 2.1
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE C EC K+F K L H ++ H
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMH-QRTHV 36
Score = 27.1 bits (61), Expect = 6.8
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
K C CGK+F K L H H +
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 27.1 bits (61), Expect = 8.0
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
KC C + + S+ H H ++ S
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 5e-08
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TG KP+ C CGK+F + +S L H R
Sbjct: 3 SGSSGTGGKPYQCNECGKAF----------------------------SQTSKLARHQRV 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 2e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG S L H R+HTGEK
Sbjct: 3 SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG S L H R+HTGEK
Sbjct: 3 SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG K Y C CGK F+Q + H+ H+ E+ S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 44.1 bits (105), Expect = 5e-06
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG +PY C+ CGK+F L RH S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45
Score = 43.7 bits (104), Expect = 1e-05
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCE 1697
TG K Y C +CG +F+Q + L H+ H+ +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG K Y C +CG +F+Q + L H+ H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G K Y C+ C K F + S L H
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTS-----------------------------KLARHQ 32
Query: 1997 RIHTGEKKYVCET 2009
R+HTGEK +
Sbjct: 33 RVHTGEKPSGPSS 45
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TG KPY C CGK+F +L H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH 31
Score = 39.1 bits (92), Expect = 4e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G Y+C C S+ L +H R+HTGEKP
Sbjct: 9 GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG K Y C CG +F L H H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G K Y C CG F+ S L H+ H ++ +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C+ C F++ L H R HTG++P
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.007
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ +PY C C +F + L RH ++H G
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37
Score = 35.6 bits (83), Expect = 0.007
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
G K Y C CG F S L H+ H+ E+ S
Sbjct: 7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.042
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + Y+C C +F + + L H HTGEKP +
Sbjct: 9 GGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.10
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G K ++C EC +++ S+L +H VHTGEK S
Sbjct: 9 GGK-PYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.16
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G + C+ CG F+ + RH +VH+ E+P
Sbjct: 3 SGSSG-TGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 31.0 bits (71), Expect = 0.29
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG K + C+ C + F ++L H +RVH
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVH 35
Score = 30.2 bits (69), Expect = 0.48
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K + + HQR VH KP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.48
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K + + HQR VH KP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQR-VHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.90
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F L +H R HT KP
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP 40
Score = 29.4 bits (67), Expect = 1.2
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G + C C K+F Q S+L H +R H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVH 35
Score = 29.0 bits (66), Expect = 1.6
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G + Y C+ C K F ++L+ H +RVH
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVH 35
Score = 28.7 bits (65), Expect = 1.8
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + + ++C+ C F L H++ H
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 27.5 bits (62), Expect = 4.9
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG ++ L H ++H+ +P
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGP 43
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens}
Length = 46
Score = 49.8 bits (120), Expect = 6e-08
Identities = 13/69 (18%), Positives = 20/69 (28%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
GEK + C+ C F + +S+L++H
Sbjct: 3 SGSSGMGEKTWKCRECDMCF----------------------------SQASSLRLHQNV 34
Query: 1340 HTGEKKYVC 1348
H GEK
Sbjct: 35 HVGEKPSGP 43
Score = 47.2 bits (113), Expect = 5e-07
Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
S K ++C C S SL H +H GEK
Sbjct: 3 SGSS-GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45
Score = 47.2 bits (113), Expect = 5e-07
Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
S K ++C C S SL H +H GEK
Sbjct: 3 SGSS-GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45
Score = 46.8 bits (112), Expect = 8e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ GEK + C C F+Q +S H+ H E+ S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC CD F++ SLRLH H G++P
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G++ + C C F L H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH 31
Score = 40.6 bits (96), Expect = 9e-05
Identities = 9/29 (31%), Positives = 10/29 (34%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S GEK + C C F L H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ GEK + C C+ F + S +L+LH
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQAS-----------------------------SLRLHQ 32
Query: 1997 RIHTGEKKYVC 2007
+H GEK
Sbjct: 33 NVHVGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GEK + C++C F+Q +SL H+ H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GEK + C++C F+Q +SL H+ H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 39.1 bits (92), Expect = 3e-04
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK + C C F SSL H+ H E+ S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 38.7 bits (91), Expect = 5e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C S+ SL+ H +H GEKP
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C C F+ SSL H+ H+ ++ +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GEK + C C F SL +H H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
E+ + C C++ F + SL H +H G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + S L+ H VH GEK S
Sbjct: 9 GEK-TWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.018
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
+KC C F + ++L+ H H GEKP
Sbjct: 13 WKCRE--CDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.053
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GE+ + C C CF + L H + VH
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVH 35
Score = 32.9 bits (76), Expect = 0.068
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC +CD +++ L+ H VH GE+ +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.076
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ E+++KC C M F +L H+ H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 32.1 bits (74), Expect = 0.11
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ GEK + C C F + L H + VH
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVH 35
Score = 31.4 bits (72), Expect = 0.20
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 97 NHSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
+ GE T+ C EC F+ LR H + +H
Sbjct: 6 SGMGEKTWKCRECDMCFSQASSLRLH-QNVHV 36
Score = 31.0 bits (71), Expect = 0.25
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ G+ C C F+ ++ H VH E+P
Sbjct: 3 SGSSG-MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.39
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+T C CD F Q S L H + H
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVH 35
Score = 30.6 bits (70), Expect = 0.41
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+KC CD ++ S + H VH GE+ S
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.69
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1475 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S SS +K ++C C + ++ HQ VH KP
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.69
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1599 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S SS +K ++C C + ++ HQ VH KP
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQN-VHVGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.5
Identities = 8/38 (21%), Positives = 11/38 (28%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + C C+ F L H H KP
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP 40
Score = 27.1 bits (61), Expect = 6.1
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
K C C F + LR H VH +P
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.5
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C C ++ +L H +H +P
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 6e-08
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKPF C CGKS+ +L H R
Sbjct: 3 SGSSGTGEKPFKCGECGKSY----------------------------NQRVHLTQHQRV 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KP++C CG + + L H R+HTGEK
Sbjct: 3 SGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KP++C CG + + L H R+HTGEK
Sbjct: 3 SGS-SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 2e-06
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++P+ C CGKS+ + HL +H S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45
Score = 43.7 bits (104), Expect = 8e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK + C CGK + Q H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 4e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK + C +CG S+ Q L H+ H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 42.1 bits (100), Expect = 4e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK + C +CG S+ Q L H+ H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 41.0 bits (97), Expect = 7e-05
Identities = 14/70 (20%), Positives = 20/70 (28%), Gaps = 29/70 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+GEK + C C K + + +L H R
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRV-----------------------------HLTQHQR 33
Query: 1998 IHTGEKKYVC 2007
+HTGEK
Sbjct: 34 VHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 3e-04
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S TGEKP+ C CGKS+ + L H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQH 31
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C ++ L QH R+HTGEKP
Sbjct: 9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC C + + L H R HTG++P
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK + C CG S+ L H H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 36.3 bits (85), Expect = 0.003
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+P+ C C S+ ++ L +H ++H G
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 35.6 bits (83), Expect = 0.006
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK + C CG + + L H+ H ++ +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK FKC EC +SY L +H VHTGEK S
Sbjct: 9 GEK-PFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.012
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK + C CG + + L H+ H+ E+ S
Sbjct: 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.054
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
G + +KC C S+ + L +H HTGEKP +
Sbjct: 9 GEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSS 45
Score = 32.1 bits (74), Expect = 0.10
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +PF C C + R HL QH R HT KP
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP 40
Score = 31.3 bits (72), Expect = 0.19
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK F C C + + + L +H +RVH
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVH 35
Score = 31.3 bits (72), Expect = 0.20
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ + C C K + + L++H +RVH
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVH 35
Score = 31.3 bits (72), Expect = 0.21
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ C CG +N R ++ +H +VH+ E+P
Sbjct: 3 SGSSG-TGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.50
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ FKC C ++ LT+H++ H
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 30.2 bits (69), Expect = 0.59
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K ++C C K R ++ HQR VH KP
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.59
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K ++C C K R ++ HQR VH KP
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQR-VHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG YN R +L H ++H+ +P
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC +C K+Y + L H VH GE+ +
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 5.6
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE F C EC KS+ + L +H +++HT
Sbjct: 7 GTGEKPFKCGECGKSYNQRVHLTQH-QRVHT 36
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.8 bits (120), Expect = 6e-08
Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GEKP+ C CGK F T +S+L H R
Sbjct: 3 SGSSGSGEKPYKCNECGKVF----------------------------TQNSHLTNHWRI 34
Query: 1340 HTGEKKYVC 1348
HTGEK
Sbjct: 35 HTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + L +H+RIHTGEK
Sbjct: 3 SGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + L +H+RIHTGEK
Sbjct: 3 SGS-SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 3e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK Y C CGK FTQ + H H+ E+ S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
+GEK Y C +CG FTQ + L H H+ +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 8e-06
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ +G++PY C+ CGK F HL H S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 9e-06
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+GEK Y C +CG FTQ + L H H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SGEK Y C+ C KVF ++S +L H
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNS-----------------------------HLTNHW 32
Query: 1997 RIHTGEKKYVC 2007
RIHTGEK
Sbjct: 33 RIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S +GEKPY C CGK F L H + H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + ++ L H R+HTGEKP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 8e-04
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+GEK Y C CG F L H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH 31
Score = 37.9 bits (89), Expect = 9e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+PY C C F + L H++IH G
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +FT+ L H R HTG++P
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S L +H H ++ +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.003
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK Y C CG F S L +H H+ E+ S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.037
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + S L H +HTGEK S
Sbjct: 9 GEK-PYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
YKC C F + + L H HTGEKP
Sbjct: 13 YKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.22
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ Y C+ C K F + L+ H R+H
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIH 35
Score = 30.9 bits (71), Expect = 0.28
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P+ C C F HL H+R HT KP
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40
Score = 30.5 bits (70), Expect = 0.45
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+ +KC+ C F LT H + H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 30.5 bits (70), Expect = 0.47
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ + C+ CG F ++ H ++H+ E+P
Sbjct: 3 SGSSG-SGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.79
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK + C+ C + F + L H R+H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K T ++ +H R +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K T ++ +H R +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWR-IHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F Q S LT H R H
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIH 35
Score = 28.2 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C+EC K FT L H ++HT
Sbjct: 7 GSGEKPYKCNECGKVFTQNSHLTNH-WRIHT 36
Score = 27.5 bits (62), Expect = 4.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L +H +IH+ +P
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K +T+ L H +H GE+ +
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C +++T S H+ +H+GE+ S
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.5 bits (119), Expect = 7e-08
Identities = 17/70 (24%), Positives = 19/70 (27%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
GEKP+ C CGKSF + S L H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSF----------------------------SGSYRLTQHWI 33
Query: 1339 NHTGEKKYVC 1348
HT EK
Sbjct: 34 THTREKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 15/40 (37%), Positives = 17/40 (42%)
Query: 1505 RSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S E KPY+C CG S L H+ HT EK
Sbjct: 4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 15/40 (37%), Positives = 17/40 (42%)
Query: 1629 RSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S E KPY+C CG S L H+ HT EK
Sbjct: 4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 44.5 bits (106), Expect = 4e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ GEK Y C CGK F+ H TH+ E+ S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 44.1 bits (105), Expect = 7e-06
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G++PY C CGKSF L +H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH 31
Score = 41.8 bits (99), Expect = 4e-05
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S GEKPY C CGKSF RL H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH 31
Score = 40.2 bits (95), Expect = 2e-04
Identities = 14/71 (19%), Positives = 15/71 (21%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ GEK Y C C K F L H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSY-----------------------------RLTQHW 32
Query: 1997 RIHTGEKKYVC 2007
HT EK
Sbjct: 33 ITHTREKPSGP 43
Score = 40.2 bits (95), Expect = 2e-04
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
GEK Y C +CG SF+ L H +H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 40.2 bits (95), Expect = 2e-04
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
GEK Y C +CG SF+ L H +H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C S L QH HT EKP
Sbjct: 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ +GEK Y C CG F L H +H++E+ S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F+ L H TH +++ +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
E+PY C C SF L +H+ H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F+ L H THT ++P
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 36.8 bits (86), Expect = 0.003
Identities = 12/33 (36%), Positives = 13/33 (39%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GEK Y C CG SF L H +H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 34.1 bits (79), Expect = 0.020
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK ++C EC +S+ L +H HT EK S
Sbjct: 9 GEK-PYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 34.1 bits (79), Expect = 0.021
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ GEK + CS C + F RL +H H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITH 35
Score = 33.7 bits (78), Expect = 0.035
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
Y+C C SF L +H ++HT EKP +
Sbjct: 13 YQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSS 45
Score = 32.9 bits (76), Expect = 0.053
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GE+ Y CS C K F RL++H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITH 35
Score = 32.1 bits (74), Expect = 0.095
Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ G+ + C CG F+ + +H H+ E+P
Sbjct: 3 SGSSG-EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.13
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ E+ ++CS C +F LT+H TH
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 31.7 bits (73), Expect = 0.14
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+P+ C C F L QH+ THT KP
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP 40
Score = 30.6 bits (70), Expect = 0.44
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
Y+CS+C K+++ Y L H + H E+ +
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 30.2 bits (69), Expect = 0.50
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C KSF RLT+H +H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITH 35
Score = 30.2 bits (69), Expect = 0.51
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C C K + + H H KP
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWI-THTREKPSGP 43
Score = 30.2 bits (69), Expect = 0.51
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C C K + + H H KP
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWI-THTREKPSGP 43
Score = 27.9 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
GE + C EC KSF+ L +H HT
Sbjct: 7 GEGEKPYQCSECGKSFSGSYRLTQH-WITHT 36
Score = 27.5 bits (62), Expect = 4.5
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ K + C CGKSF L +H I H+ +P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 27.5 bits (62), Expect = 4.8
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
Y+C C + ++ +H+ H+ E+ S
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 27.1 bits (61), Expect = 6.1
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG ++ L H H+ +P
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.4 bits (119), Expect = 8e-08
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK F T +S+L H
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----------------------------TQNSHLARHRGI 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 7e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 4e-06
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C+ CGK F HL RH S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 43.6 bits (104), Expect = 8e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FTQ + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 2e-05
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C KVF ++S +L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLARHR 32
Query: 1997 RIHTGEKKYVCET 2009
IHTGEK +
Sbjct: 33 GIHTGEKPSGPSS 45
Score = 38.6 bits (91), Expect = 5e-04
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK F L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + ++ L +H +HTGEKP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 12/33 (36%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG F L H H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +FT+ L H HTG++P
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.008
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S L HR H ++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C F + L RH IH G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 34.4 bits (80), Expect = 0.017
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F S L H+ H+ E+ S
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.020
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + S L +H +HTGEK S
Sbjct: 9 GEK-PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.044
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F + + L H HTGEKP +
Sbjct: 13 YKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 30.5 bits (70), Expect = 0.36
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F HL +H HT KP
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40
Score = 30.5 bits (70), Expect = 0.38
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
C+ CG F ++ RH +H+ E+P
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.47
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F + L H + +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 29.4 bits (67), Expect = 0.96
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C F L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 29.0 bits (66), Expect = 1.5
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K T ++ H+ +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.5
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K T ++ H+ +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 2.7
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F Q S L H + H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 28.2 bits (64), Expect = 3.2
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F + L+ H R +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 27.1 bits (61), Expect = 6.9
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L H IH+ +P
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K +T+ L H +H GE+ +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.5 bits (119), Expect = 8e-08
Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GE+PF C CGK F S+L H+R
Sbjct: 3 SGSSGSGERPFKCNECGKGF----------------------------GRRSHLAGHLRL 34
Query: 1340 HTGEKKYVC 1348
H+ EK
Sbjct: 35 HSREKSSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 1505 RSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S +P++C+ CG G + L H R+H+ EK
Sbjct: 4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 1629 RSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S +P++C+ CG G + L H R+H+ EK
Sbjct: 4 GSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GE+ + C CGKGF + + H HS E+S S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G+RP+ C+ CGK F + HL H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGH 31
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGE+ + C+ C K F R S +L H+R
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRS-----------------------------HLAGHLR 33
Query: 1998 IHTGEKKYVCET 2009
+H+ EK +
Sbjct: 34 LHSREKSSGPSS 45
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GE+P+ C CGK F + L H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGH 31
Score = 39.1 bits (92), Expect = 3e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GE+ + C +CG F + + L H HS
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36
Score = 39.1 bits (92), Expect = 3e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
+GE+ + C +CG F + + L H HS
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36
Score = 38.7 bits (91), Expect = 5e-04
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GE+ + C CG GF +S L H HS+E+ S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 38.7 bits (91), Expect = 6e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE +KC C R L H+RLH+ EK
Sbjct: 9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+KC+ C F R L H+R H+ ++
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GE+ + C CG GF +S L H H ++++ +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GE+ FKC EC + +G S L HL +H+ EK S
Sbjct: 9 GER-PFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 37.5 bits (88), Expect = 0.002
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S ERP+ C C F + L H ++H
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 34.8 bits (81), Expect = 0.012
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GE+ + C CG F L H H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 33.7 bits (78), Expect = 0.028
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GE+ F C+ C +GF ++ L H R+H
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLH 35
Score = 33.7 bits (78), Expect = 0.036
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGER + C+ C K F ++ L+ H R+H
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLH 35
Score = 33.3 bits (77), Expect = 0.048
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+KC C F R + L H+ H+ EK +
Sbjct: 13 FKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPSS 45
Score = 31.7 bits (73), Expect = 0.13
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S RPF C C GF R HL H R H+ K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKS 40
Score = 31.4 bits (72), Expect = 0.18
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ SG+ C+ CG F R ++ H ++HS E+
Sbjct: 3 SGSSG-SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 30.6 bits (70), Expect = 0.45
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1474 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S SS S ++ ++C+ C K R ++ H R +H K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGP 43
Score = 30.6 bits (70), Expect = 0.45
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S SS S ++ ++C+ C K R ++ H R +H K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLR-LHSREKSSGP 43
Score = 30.2 bits (69), Expect = 0.59
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+KC++C K + R L HL +H E++ +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 30.2 bits (69), Expect = 0.59
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S ER FKC+ C F L H + H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 29.0 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE F C+EC K F + L H +LH+
Sbjct: 7 GSGERPFKCNECGKGFGRRSHLAGH-LRLHS 36
Score = 28.7 bits (65), Expect = 2.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + R +L H+++HS +
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 26.7 bits (60), Expect = 8.6
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+KC C + + S H +HS E+ S
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.4 bits (119), Expect = 8e-08
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK F T +S+L H
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----------------------------TQNSHLVRHRGI 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 6e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 6e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + L H IHTGEK
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 5e-06
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C+ CGK F HL RH S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45
Score = 44.4 bits (106), Expect = 5e-06
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FTQ + H+ H+ E+ S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 9e-06
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 43.6 bits (104), Expect = 9e-06
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 42.9 bits (102), Expect = 2e-05
Identities = 18/73 (24%), Positives = 25/73 (34%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C KVF ++S +L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLVRHR 32
Query: 1997 RIHTGEKKYVCET 2009
IHTGEK +
Sbjct: 33 GIHTGEKPSGPSS 45
Score = 38.6 bits (91), Expect = 5e-04
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK F L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIHTGEKPSGP 43
Score = 38.2 bits (90), Expect = 7e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + ++ L +H +HTGEKP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.002
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C F + LVRH IH G
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/33 (36%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG F L H H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +FT+ L H HTG++P
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.005
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S L HR H ++ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 35.5 bits (83), Expect = 0.007
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F S L H+ H+ E+ S
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.044
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + S L +H +HTGEK S
Sbjct: 9 GEK-PYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 32.8 bits (76), Expect = 0.062
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F + + L H HTGEKP +
Sbjct: 13 YKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS 45
Score = 30.9 bits (71), Expect = 0.29
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
C+ CG F +++RH +H+ E+P
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 30.5 bits (70), Expect = 0.45
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F HL++H HT KP
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKP 40
Score = 30.1 bits (69), Expect = 0.57
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F + L H R +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIH 35
Score = 29.4 bits (67), Expect = 1.2
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F + L H + +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIH 35
Score = 29.0 bits (66), Expect = 1.6
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C F L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K T +++ H+ +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K T +++ H+ +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRG-IHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 3.2
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F Q S L H + H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIH 35
Score = 27.8 bits (63), Expect = 4.3
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L+ H IH+ +P
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.5 bits (119), Expect = 9e-08
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+G+KP+ C+ C K+F +L H R
Sbjct: 3 SGSSGSGKKPYECKECRKTF----------------------------IQIGHLNQHKRV 34
Query: 1340 HTGEKKYVCE 1349
HTGE+
Sbjct: 35 HTGERSSGPS 44
Score = 46.4 bits (111), Expect = 8e-07
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
KPYEC C L+ H R+HTGE+
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 46.4 bits (111), Expect = 8e-07
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
KPYEC C L+ H R+HTGE+
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 46.4 bits (111), Expect = 1e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +G+K Y C+ C K F Q HK H+ ERS S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 45.6 bits (109), Expect = 2e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G +PY C C K+F+ HLN+H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQH 31
Score = 41.4 bits (98), Expect = 5e-05
Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ SG+K Y C C K F++ +L H
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIG-----------------------------HLNQHK 32
Query: 1997 RIHTGEKKYVCE 2008
R+HTGE+
Sbjct: 33 RVHTGERSSGPS 44
Score = 41.4 bits (98), Expect = 6e-05
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE 1698
+G+K Y C++C +F Q L HK H+ R+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +G+KPY C+ C K+F LN H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQH 31
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+G+K Y C++C +F Q L HK H+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36
Score = 38.3 bits (90), Expect = 7e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G+ Y+C C + L QH R+HTGE+
Sbjct: 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F + L H R HTG+R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S G+K Y C+ C F L H+ H +R+
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ G+K Y C+ C F+ L+ HK H+ ER S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 35.6 bits (83), Expect = 0.006
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+G+K Y C+ C +F+ G LN H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQH 31
Score = 35.2 bits (82), Expect = 0.010
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S ++PY C+ C +F + L +H ++H G
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG 37
Score = 34.8 bits (81), Expect = 0.011
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G+K ++C EC +++ L +H VHTGE+ S
Sbjct: 9 GKK-PYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 32.1 bits (74), Expect = 0.11
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S ++ ++C C TF L +HK+ H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 32.1 bits (74), Expect = 0.13
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +G+K + C C++ F LN+H KRVH
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVH 35
Score = 31.7 bits (73), Expect = 0.13
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SG++ Y C C K F L++H +RVH
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVH 35
Score = 31.7 bits (73), Expect = 0.13
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCE 353
Y+C C +F + L +H HTGE+
Sbjct: 13 YECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 31.7 bits (73), Expect = 0.16
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ SG + C C F ++ +H +VH+ ER
Sbjct: 3 SGSSG-SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 31.4 bits (72), Expect = 0.21
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1474 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S SS S KK YEC C+K ++ H+R VH +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGP 43
Score = 31.4 bits (72), Expect = 0.21
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S SS S KK YEC C+K ++ H+R VH +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR-VHTGERSSGP 43
Score = 30.6 bits (70), Expect = 0.36
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +P+ C+ C F HL QH R HT +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERS 40
Score = 29.4 bits (67), Expect = 1.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+C +C KT+ + L H VH GER+
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 28.3 bits (64), Expect = 2.3
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G++ C C K+F Q+ L +H KR H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVH 35
Score = 28.3 bits (64), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SG+ + C EC K+F L +H K++HT
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQH-KRVHT 36
Score = 26.7 bits (60), Expect = 8.9
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C C + +L H ++H+ R
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGP 43
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.4 bits (119), Expect = 9e-08
Identities = 18/70 (25%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TG+KP+ C CGK F T +S+L H
Sbjct: 3 SGSSGTGKKPYKCNECGKVF----------------------------TQNSHLARHRGI 34
Query: 1340 HTGEKKYVCE 1349
HTGEK
Sbjct: 35 HTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + L H IHTGEK
Sbjct: 3 SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + L H IHTGEK
Sbjct: 3 SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 1335 VHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TG+K Y C CGK FTQ + H+ H+ E+ S
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 5e-06
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG +PY C+ CGK F HL RH S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKCE 1697
TG+K Y C +CG FTQ + L H+ H+ +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TG+K Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 29/72 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G+K Y C+ C KVF ++S +L H
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNS-----------------------------HLARHR 32
Query: 1997 RIHTGEKKYVCE 2008
IHTGEK
Sbjct: 33 GIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 4e-04
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TG+KPY C CGK F L H H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G+ YKC C + ++ L +H +HTGEKP
Sbjct: 9 GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TG+K Y C CG F L H H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 35.9 bits (84), Expect = 0.006
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +FT+ L H HTG++P
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ ++PY C C F + L RH IH G
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 35.2 bits (82), Expect = 0.008
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G+K Y C CG F S L HR H ++ +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.011
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
G+K Y C CG F S L H+ H+ E+ S
Sbjct: 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.032
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G+K +KC EC + + S L +H +HTGEK S
Sbjct: 9 GKK-PYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.061
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F + + L H HTGEKP +
Sbjct: 13 YKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSS 45
Score = 30.9 bits (71), Expect = 0.26
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
C+ CG F ++ RH +H+ E+P
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.51
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F HL +H HT KP
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40
Score = 29.0 bits (66), Expect = 1.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K Y+C+ C K T ++ H+ +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K Y+C+ C K T ++ H+ +H KP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRG-IHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.7
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + ++ +KC+ C F L H+ H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 29.0 bits (66), Expect = 1.7
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G++ C C K F Q S L H + H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 28.6 bits (65), Expect = 1.9
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG+K + C+ C + F + L H + +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 27.9 bits (63), Expect = 4.0
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G++ Y C+ C K F + L+ H R +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIH 35
Score = 27.5 bits (62), Expect = 5.8
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L H IH+ +P
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K +T+ L H +H GE+ +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 49.1 bits (118), Expect = 1e-07
Identities = 16/70 (22%), Positives = 21/70 (30%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
+GEK +C CGK+F S L++H R
Sbjct: 3 SGSSGSGEKSHTCDECGKNF----------------------------CYISALRIHQRV 34
Query: 1340 HTGEKKYVCE 1349
H GEK
Sbjct: 35 HMGEKCSGPS 44
Score = 45.7 bits (109), Expect = 2e-06
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
K + CD CG +L H R+H GEK
Sbjct: 3 SGS-SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 45.7 bits (109), Expect = 2e-06
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
K + CD CG +L H R+H GEK
Sbjct: 3 SGS-SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ +GEK + C+ CGK F ++ H+ H E+ S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 42.2 bits (100), Expect = 3e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ +G++ +TCD CGK+F L H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH 31
Score = 41.8 bits (99), Expect = 4e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK + C+ CG +F + +L IH H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 41.8 bits (99), Expect = 4e-05
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S +GEK +TC+ CGK+F L H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH 31
Score = 41.8 bits (99), Expect = 5e-05
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ GEK +TC+ CG F Y S+L H+ H E+ S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 41.0 bits (97), Expect = 9e-05
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GEK + C +CG +F ++L H+ H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
Score = 41.0 bits (97), Expect = 9e-05
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
+GEK + C +CG +F ++L H+ H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
Score = 40.3 bits (95), Expect = 1e-04
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK +TC+ CG F Y S+L H+ H+ ++ +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 39.9 bits (94), Expect = 2e-04
Identities = 16/72 (22%), Positives = 21/72 (29%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
SGEK + C C K F S L++H R
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYIS-----------------------------ALRIHQR 33
Query: 1998 IHTGEKKYVCET 2009
+H GEK +
Sbjct: 34 VHMGEKCSGPSS 45
Score = 37.2 bits (87), Expect = 0.002
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+ + C+ C +F +L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 34.5 bits (80), Expect = 0.017
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE + C C +L+ H R+H GEK
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 33.7 bits (78), Expect = 0.035
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTCD 657
+ C C F +LR+H R H G++
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 33.3 bits (77), Expect = 0.036
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 235 QIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK C EC +++ S L+ H VH GEK S
Sbjct: 5 SSGSGEK-SHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 32.2 bits (74), Expect = 0.10
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ +TC C K F + L H +RVH
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVH 35
Score = 31.8 bits (73), Expect = 0.13
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK C C + F + L H +RVH
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVH 35
Score = 31.4 bits (72), Expect = 0.20
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ SG+ H CD CG F + H +VH E+
Sbjct: 3 SGSSG-SGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 31.4 bits (72), Expect = 0.22
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S E+S C C F L H++ H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 30.3 bits (69), Expect = 0.50
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE +CDEC K+F LR H +++H
Sbjct: 7 GSGEKSHTCDECGKNFCYISALRIH-QRVHM 36
Score = 29.9 bits (68), Expect = 0.83
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE++ +C C K+F +S L H +R H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIH-QRVH 35
Score = 29.1 bits (66), Expect = 1.5
Identities = 8/34 (23%), Positives = 10/34 (29%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
S + C+ C F L H R H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
Score = 28.7 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 1770 HMVVHSN-KNHICEICGKSFKKKDLLREHMIVHS 1802
S K+H C+ CGK+F LR H VH
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36
Score = 28.3 bits (64), Expect = 2.3
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+ C C +F +AL+ H H GEK +
Sbjct: 13 HTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSS 45
Score = 27.6 bits (62), Expect = 5.5
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 452 HLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
+ G+ H C CG F L H R H
Sbjct: 3 SGSSGS-GEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 27.2 bits (61), Expect = 5.7
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+ C +C K + L+ H VH GE+ +
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 49.1 bits (118), Expect = 1e-07
Identities = 16/65 (24%), Positives = 20/65 (30%), Gaps = 28/65 (43%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGE 1343
+GEKPF C C K+F + S L VH + H E
Sbjct: 5 SSGEKPFGCSCCEKAF----------------------------SSKSYLLVHQQTHAEE 36
Query: 1344 KKYVC 1348
K
Sbjct: 37 KPSGP 41
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/39 (33%), Positives = 15/39 (38%)
Query: 1506 SVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S KP+ C C SSK L H + H EK
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 47.5 bits (114), Expect = 3e-07
Identities = 13/39 (33%), Positives = 15/39 (38%)
Query: 1630 SVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S KP+ C C SSK L H + H EK
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+GEK + C C K F+ + H+ TH+EE+ S
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAH 368
+GEKP+ C C K+F K L H
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVH 29
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/69 (20%), Positives = 18/69 (26%), Gaps = 29/69 (42%)
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHT 2000
SGEK + C C K F S L +H + H
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKS-----------------------------YLLVHQQTHA 34
Query: 2001 GEKKYVCET 2009
EK +
Sbjct: 35 EEKPSGPSS 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
+ C C+ F+ L +H +TH ++P
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK + C C F KS L H+ +H++E+ S
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 39.4 bits (93), Expect = 3e-04
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 9/40 (22%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCS 676
+G++P+ C C K+F +K +L H S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE + C C S L H + H EKP
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
GEK + C C F+ KS L H+ TH +++ +
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 36.7 bits (86), Expect = 0.003
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKC 1696
+GEK + C C +F+ + L H+ +H+E +
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 36.7 bits (86), Expect = 0.003
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GEK + C C +F+ + L H+ +H+
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34
Score = 36.0 bits (84), Expect = 0.005
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK F C C +++ + S L H H EK S
Sbjct: 7 GEK-PFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 34.0 bits (79), Expect = 0.021
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
+ C C +F + L H +H EKP +
Sbjct: 11 FGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSS 43
Score = 33.7 bits (78), Expect = 0.032
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 786 TKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ S E+P+ C C +F K L+ H + H
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 33.3 bits (77), Expect = 0.039
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 570 VHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ + CS C K F K+ L H ++ H
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVH-QQTH 33
Score = 32.9 bits (76), Expect = 0.064
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK + C C +F L +H +H
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 32.5 bits (75), Expect = 0.082
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 1476 ESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
S S +K + C C+K +++ ++ HQ+ H KP +
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPSS 43
Score = 32.5 bits (75), Expect = 0.082
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 1600 ESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
S S +K + C C+K +++ ++ HQ+ H KP +
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEKPSGPSS 43
Score = 32.1 bits (74), Expect = 0.12
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 264 AVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK F CS C++ F K+ L H ++ H
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVH-QQTH 33
Score = 31.0 bits (71), Expect = 0.26
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
+ CS C+K ++ L H H E+ +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 31.0 bits (71), Expect = 0.32
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 1208 VHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C+ C+K+F S L H +++H
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVH-QQTH 33
Score = 30.6 bits (70), Expect = 0.38
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1800 VHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S +PF C C F + +LL H +TH KP
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP 38
Score = 30.6 bits (70), Expect = 0.44
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTC 712
+ C+ C + S + H H EK
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 30.2 bits (69), Expect = 0.48
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGE-TFSCDECSKSFTTKKCLREHYKKLHT 127
SGE F C C K+F++K L H ++ H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVH-QQTHA 34
Score = 30.2 bits (69), Expect = 0.55
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
C C F+++ +L H + H+ E+P
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 28.7 bits (65), Expect = 1.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
S E+ F CS C F L H++TH
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 28.7 bits (65), Expect = 1.8
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
K C C K+F K L H H+ +P
Sbjct: 9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 28.3 bits (64), Expect = 2.9
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
+ C C++ ++S S H + H+ E+ S
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 27.1 bits (61), Expect = 7.2
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ C ++++ LL H + H+ +P
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 49.1 bits (118), Expect = 1e-07
Identities = 19/70 (27%), Positives = 22/70 (31%), Gaps = 28/70 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
TGEKP+ C CGK F T +S+L H R
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----------------------------TQNSHLARHRRV 34
Query: 1340 HTGEKKYVCE 1349
HTG K
Sbjct: 35 HTGGKPSGPS 44
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY+C+ CG + L H R+HTG K
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY+C+ CG + L H R+HTG K
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH---------YNCSH 677
+ TG++PY C+ CGK F HL RH S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45
Score = 44.0 bits (105), Expect = 7e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ TGEK Y C CGK FTQ + H+ H+ + S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
TGEK Y C +CG FTQ + L H+ H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 29/73 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GEK Y C+ C KVF ++S +L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNS-----------------------------HLARHR 32
Query: 1997 RIHTGEKKYVCET 2009
R+HTG K +
Sbjct: 33 RVHTGGKPSGPSS 45
Score = 38.3 bits (90), Expect = 6e-04
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE YKC C + ++ L +H R+HTG KP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 38.3 bits (90), Expect = 8e-04
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGEKPY C CGK F L H + H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVHTGGKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC+ C +FT+ L H R HTG +P
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 36.3 bits (85), Expect = 0.004
Identities = 12/33 (36%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGEK Y C CG F L H H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S GEK Y C CG F S L HR H + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 34.4 bits (80), Expect = 0.015
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E+PY C C F + L RH ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 34.4 bits (80), Expect = 0.017
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
GEK Y C CG F S L H+ H+ + S
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 34.0 bits (79), Expect = 0.022
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
GEK +KC EC + + S L +H VHTG K S
Sbjct: 9 GEK-PYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 32.9 bits (76), Expect = 0.052
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEA 354
YKC C F + + L H HTG KP +
Sbjct: 13 YKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSS 45
Score = 30.6 bits (70), Expect = 0.42
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICE 798
+ +G+ + C+ CG F ++ RH +VH+ +P
Sbjct: 3 SGSSG-TGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 30.2 bits (69), Expect = 0.53
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 1363 YHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E+ +KC+ C F L H++ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 30.2 bits (69), Expect = 0.55
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGEK + C+ C + F + L H +RVH
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVH 35
Score = 30.2 bits (69), Expect = 0.57
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ +P+ C C F HL +H R HT KP
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP 40
Score = 29.4 bits (67), Expect = 1.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
K Y+C+ C K T ++ H+R VH KP +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGPSS 45
Score = 29.4 bits (67), Expect = 1.2
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
K Y+C+ C K T ++ H+R VH KP +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRR-VHTGGKPSGPSS 45
Score = 28.3 bits (64), Expect = 2.5
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ C C K F Q S L H +R H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVH 35
Score = 28.3 bits (64), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE+ Y C+ C K F + L+ H RRVH
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVH 35
Score = 27.9 bits (63), Expect = 4.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKC++C K +T+ L H VH G + +
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 27.1 bits (61), Expect = 7.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
CN CG + +L H ++H+ G+P
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGP 43
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 47
Score = 49.1 bits (118), Expect = 1e-07
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
TG+KP+ C CGK+F L RH+ H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 47.2 bits (113), Expect = 5e-07
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFG-YQCN 685
+ TG +PY C CGK+F+ L RH+ H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 45.3 bits (108), Expect = 3e-06
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYR-IHTGEKKYVC 1544
KPYEC CG SL H+R HTGEK
Sbjct: 3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 45.3 bits (108), Expect = 3e-06
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYR-IHTGEKKYVC 1668
KPYEC CG SL H+R HTGEK
Sbjct: 3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 43.7 bits (104), Expect = 9e-06
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TG+KPY C CGK+F L H+ +H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYH 1560
TG+K Y C +CG +F Q SL H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYH 1684
TG+K Y C +CG +F Q SL H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYH-KFTHSEERSFKCS 1377
+ TG+K Y C CGK F Q S H ++ H+ E+ S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 39.5 bits (93), Expect = 2e-04
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 28/71 (39%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G+K Y C C K F+++++L H +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWR---------------------------- 33
Query: 1997 RIHTGEKKYVC 2007
HTGEK
Sbjct: 34 YYHTGEKPSGP 44
Score = 39.5 bits (93), Expect = 3e-04
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
TG+K Y C CG +F+ SL H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSL-YHHRFTHIKDRTYPCT 437
S G+K Y C CG F +SL H R+ H ++ +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 35.2 bits (82), Expect = 0.008
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSL-HHHKFSHSKERMFQCS 741
+ G+K Y C CG F+ +SL H ++ H+ E+ S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 35.2 bits (82), Expect = 0.009
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 1483 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
K YEC C K ++I H R H KP
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 35.2 bits (82), Expect = 0.009
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 1607 KIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
K YEC C K ++I H R H KP
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 34.8 bits (81), Expect = 0.013
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G++ Y C C K F L H+R H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 33.3 bits (77), Expect = 0.042
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHY-KIHKG 819
+ ++PY C C +F + SL+RH+ H G
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG 38
Score = 33.3 bits (77), Expect = 0.044
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 626 YKCHICDSIFTRYDSLRLHVR-THTGDRPYTC 656
Y+C C F + SL H R HTG++P
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 31.4 bits (72), Expect = 0.23
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G++ C C K+F Q + L H++ H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 31.4 bits (72), Expect = 0.24
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TG+K + C C + F L H++ H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 31.4 bits (72), Expect = 0.24
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHL-AVHTGEKHFVCS 275
G+K ++C EC +++ + L +H HTGEK S
Sbjct: 9 GKK-PYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 30.6 bits (70), Expect = 0.37
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Query: 320 YKCPHPGCPSSFQRFNALQEHM-LSHTGEKPYTCEA 354
Y+C C +F + +L H HTGEKP +
Sbjct: 13 YECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46
Score = 30.6 bits (70), Expect = 0.42
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G+ + C EC K+F L H++ HT
Sbjct: 7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37
Score = 27.5 bits (62), Expect = 5.0
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYR-THT--KP 1832
+ +P+ C C F L++H+R HT KP
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP 41
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 1503 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1546
S + PY+C C S K L H R+HT EK
Sbjct: 3 SGSS-GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45
Score = 48.7 bits (117), Expect = 1e-07
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 1627 HQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQ 1670
S + PY+C C S K L H R+HT EK
Sbjct: 3 SGSS-GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45
Score = 48.7 bits (117), Expect = 1e-07
Identities = 15/69 (21%), Positives = 17/69 (24%), Gaps = 28/69 (40%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
G P+ C C KSF + L VH R
Sbjct: 3 SGSSGAGVNPYKCSQCEKSF----------------------------SGKLRLLVHQRM 34
Query: 1340 HTGEKKYVC 1348
HT EK
Sbjct: 35 HTREKPSGP 43
Score = 44.8 bits (107), Expect = 4e-06
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ G Y C C K F+ H+ H+ E+ S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 42.5 bits (101), Expect = 2e-05
Identities = 11/29 (37%), Positives = 12/29 (41%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G PY C C KSF K L H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31
Score = 41.4 bits (98), Expect = 6e-05
Identities = 13/29 (44%), Positives = 13/29 (44%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S G PY C C KSF K RL H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31
Score = 40.6 bits (96), Expect = 1e-04
Identities = 13/71 (18%), Positives = 17/71 (23%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +G Y C C K F L +H
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKL-----------------------------RLLVHQ 32
Query: 1997 RIHTGEKKYVC 2007
R+HT EK
Sbjct: 33 RMHTREKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
YKC C+ F+ L +H R HT ++P
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
G Y C QC SF+ L H+ H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
G Y C QC SF+ L H+ H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 39.1 bits (92), Expect = 4e-04
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ G Y C C F K L H+ H++E+ S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 14/35 (40%), Positives = 15/35 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
G YKC C S L H R+HT EKP
Sbjct: 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S G Y C C F+ K L H+ H +++ +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 36.7 bits (86), Expect = 0.003
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ PY C C SF K L+ H ++H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 36.4 bits (85), Expect = 0.003
Identities = 8/29 (27%), Positives = 9/29 (31%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
G Y C C SF L +H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH 31
Score = 36.4 bits (85), Expect = 0.004
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
G +KC +C +S+ L H +HT EK S
Sbjct: 9 GVN-PYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 33.3 bits (77), Expect = 0.039
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+G Y CS C K F K RL H +R+H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMH 35
Score = 33.3 bits (77), Expect = 0.049
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ G + CS C++ F K RL H +R+H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMH 35
Score = 33.3 bits (77), Expect = 0.050
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
GV YKC C SF L H HT EKP
Sbjct: 9 GVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1475 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S SS + Y+C C+K + + ++ HQR +H KP
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 1599 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S SS + Y+C C+K + + ++ HQR +H KP
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
YKCS C+K+++ L H +H E+ +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 31.7 bits (73), Expect = 0.17
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G + C C F+ + +L H ++H+ E+P
Sbjct: 3 SGSSG-AGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 29.8 bits (68), Expect = 0.73
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + +KCS C +F L H++ H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 29.4 bits (67), Expect = 0.92
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+G + C +C KSF+ K L H +++HT
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVH-QRMHT 36
Score = 29.4 bits (67), Expect = 0.95
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
+ + P+ C C F + LL H R HT KP
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP 40
Score = 28.7 bits (65), Expect = 1.8
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G C+ C+KSF RL H +R H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMH 35
Score = 28.3 bits (64), Expect = 2.6
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGERKYTCS 580
YKC C++ ++ H +H+ E+ S
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 27.1 bits (61), Expect = 6.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ C C KSF K L H +H+ +P
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.1 bits (61), Expect = 7.5
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ C ++ + LL H ++H+ +P
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA;
NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A
4znf_A
Length = 57
Score = 48.9 bits (116), Expect = 1e-07
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 1485 YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKK 1541
Y C+ C + + H R+ H ++PY C C +K +L H + KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 48.9 bits (116), Expect = 1e-07
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 1609 YECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKK 1665
Y C+ C + + H R+ H ++PY C C +K +L H + KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRT-HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 48.9 bits (116), Expect = 2e-07
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
Y C CG S LK H+R HT + Y C C F + H + + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 47.4 bits (112), Expect = 5e-07
Identities = 15/54 (27%), Positives = 19/54 (35%)
Query: 1292 CQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGEKK 1345
C+ CG LK+H Y C C NL HM++ KK
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 47.0 bits (111), Expect = 9e-07
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 1514 YECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
Y C+ CG L H R HT + Y C C SF +L H S +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 47.0 bits (111), Expect = 9e-07
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 1638 YECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
Y C+ CG L H R HT + Y C C SF +L H S +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 46.2 bits (109), Expect = 2e-06
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 625 KYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
KY C C + L+ H+RTHT RPY C C SF K +L +H
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48
Score = 45.1 bits (106), Expect = 4e-06
Identities = 15/55 (27%), Positives = 21/55 (38%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
Y C CG + K H+ H + Y C C F K +L H S + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 45.1 bits (106), Expect = 4e-06
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 1779 HICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPK 1833
+ICE CG KK +L++H+ H+ +RP+ C +CN FK + +L +H ++ K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 44.7 bits (105), Expect = 5e-06
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 1261 KYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
KY C C + L++H+R HT +P+ C C SF + +L +H
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48
Score = 44.3 bits (104), Expect = 8e-06
Identities = 13/56 (23%), Positives = 17/56 (30%)
Query: 654 YTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKK 709
Y C+ CG L +H Y C C N H+ + KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 44.3 bits (104), Expect = 8e-06
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 1948 YACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEKK 2004
Y C C + S L+ H++ H +R + C C+ +F NL HM+ KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 43.9 bits (103), Expect = 1e-05
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 378 YRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
Y C CG + K H+ +H + Y C C F K +L H +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 42.8 bits (100), Expect = 2e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 766 KHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
K+IC+ CG + +H + H+ RPY C YCN SFK K +L +H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 42.0 bits (98), Expect = 5e-05
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 1345 KYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
KY+CE CG + + H TH++ R + C+YC +F+ LT+H K+
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 42.0 bits (98), Expect = 5e-05
Identities = 15/56 (26%), Positives = 18/56 (32%)
Query: 350 YTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEKK 405
Y CE CG L H + Y C C + N H+ S KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 41.6 bits (97), Expect = 6e-05
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+ C+ C LK H+R HT + Y C C SF G+L H S
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 41.6 bits (97), Expect = 8e-05
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 1186 RYKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMK 1241
+Y C +C + LK H+ H R CT C+ SF LT+H K K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 41.2 bits (96), Expect = 9e-05
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 405 KYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHT 457
KY CE CG S L H TH R Y CTYC +++ L +H+K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 39.3 bits (91), Expect = 4e-04
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 243 KFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYK 292
K+ C EC S LKKH+ HT + + C+ C F K L +H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 38.9 bits (90), Expect = 5e-04
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 319 KYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
KY C C ++ + L++H+ +HT +PY C C SF K L H
Sbjct: 1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKH 48
Score = 38.9 bits (90), Expect = 6e-04
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 709 KYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
KY CE CG S L H +H+ R + C++C + + L +H ++
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 36.2 bits (83), Expect = 0.005
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 548 KYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYR 597
KY C C S K+H H+ R Y C+ C+ F K L++H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 35.8 bits (82), Expect = 0.007
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 462 RHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTH 513
++IC+ CG L HIRTH R + C CN + KT+ +L +H +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 35.5 bits (81), Expect = 0.011
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 1753 VCSYCGNSYANPGNLRTHMVVHSN-KNHICEICGKSFKKKDLLREHMIVHS 1802
+C CG P L+ H+ H++ + + C C SFK K L +HM +
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Score = 34.7 bits (79), Expect = 0.017
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 434 YPCTYCERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
Y C C + + P LK+H++ HT + C C F T+ NL H+++
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHT-DVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 34.7 bits (79), Expect = 0.019
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 1919 RFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKA-VHEK 1973
++ C +C + LK H+ H+ + Y C CN F L HMK+ H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 34.3 bits (78), Expect = 0.027
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 738 FQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTER 793
+ C C + P LK+H +TH + + C C F T+ N+ +H K + +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTH-TDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 33.5 bits (76), Expect = 0.053
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 2004 KYVCETCGASFVHWGSLNIHNYSHINAQ-FVCSFCGNTYKNPKSLDSHIRNSHTNRKK 2060
KY+CE CG L H +H + + + C++C ++K +L H++ S + KK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSKK 57
Score = 33.5 bits (76), Expect = 0.056
Identities = 18/56 (32%), Positives = 25/56 (44%)
Query: 1402 KHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQK 1457
K++C CG L H++ H+ RP+ C CN FK + L S H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 31.2 bits (70), Expect = 0.37
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 152 KYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHT 206
KY C ECG K+ L++HI H V+ + C C +F L H ++
Sbjct: 1 KYICEECGIRXKKPSMLKKHI-RTHTDVRPYHCTYCNFSFKTKGNLTKH-MKSKA 53
Score = 30.5 bits (68), Expect = 0.69
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 74 KFQCPDCHTMMKNFAYLKKHVRDNHSGETFSCDECSKSFTTKKCLREHYKK 124
K+ C +C K + LKKH+R + + C C+ SF TK L +H K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51
Score = 29.7 bits (66), Expect = 1.3
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEK 270
+ C C S+ L KH+ K
Sbjct: 30 YHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 28.9 bits (64), Expect = 2.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 1665 KYVCQQCGASFTQWASLFYHKFSHSETRNQKCEE---SFDNCNNLWSHM 1710
KY+C++CG + + L H +H++ R C SF NL HM
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49
Score = 28.9 bits (64), Expect = 2.6
Identities = 14/77 (18%), Positives = 23/77 (29%), Gaps = 21/77 (27%)
Query: 576 KYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHICDSIF 635
KY C C + L +H R + V Y C C+ F
Sbjct: 1 KYICEECGIRXKKPSMLKKHIR---------------------THTDVRPYHCTYCNFSF 39
Query: 636 TRYDSLRLHVRTHTGDR 652
+L H+++ +
Sbjct: 40 KTKGNLTKHMKSKAHSK 56
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 48.4 bits (116), Expect = 2e-07
Identities = 14/67 (20%), Positives = 18/67 (26%), Gaps = 28/67 (41%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN 1339
GE P+ C CGKSF T +L VH R+
Sbjct: 2 SSGSSGGETPYLCGQCGKSF----------------------------TQRGSLAVHQRS 33
Query: 1340 HTGEKKY 1346
+
Sbjct: 34 CSQSGPS 40
Score = 45.3 bits (108), Expect = 2e-06
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
GE Y+C QCG SFTQ SL H+ S S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35
Score = 45.3 bits (108), Expect = 2e-06
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
GE Y+C QCG SFTQ SL H+ S S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35
Score = 45.0 bits (107), Expect = 3e-06
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
+ GE Y+C CGK FTQ S H+ + S+
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 44.2 bits (105), Expect = 5e-06
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
PY C CG + + SL H R +
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 44.2 bits (105), Expect = 5e-06
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
PY C CG + + SL H R +
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 41.5 bits (98), Expect = 5e-05
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAH 368
S GE PY C CGKSF + L H
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVH 30
Score = 40.0 bits (94), Expect = 2e-04
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G+ PY C CGKSF + L H
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30
Score = 40.0 bits (94), Expect = 2e-04
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GE Y+C CG SF GSL +H S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 38.4 bits (90), Expect = 5e-04
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKY 2005
+ C C ++F +L +H R +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 38.4 bits (90), Expect = 6e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFS 1291
GET Y C C ++ SL H R + P S
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 36.9 bits (86), Expect = 0.002
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E PY+C C SF ++ SL H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 36.9 bits (86), Expect = 0.002
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
S GE Y C CG F + SL H+ +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 36.5 bits (85), Expect = 0.003
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
+ GE Y C CG F + SL H+ S S+
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 36.1 bits (84), Expect = 0.004
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYT 655
Y C C FT+ SL +H R+ + P +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 32.3 bits (74), Expect = 0.10
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
GE Y C C K F + L+ H +R
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVH-QRSC 34
Score = 31.1 bits (71), Expect = 0.24
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
GE ++C C + F + L H +R
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVH-QRSC 34
Score = 31.1 bits (71), Expect = 0.26
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYT 351
Y C C SF + +L H S + P +
Sbjct: 12 YLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 30.7 bits (70), Expect = 0.29
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GE + C +C +S+ L H +
Sbjct: 8 GET-PYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 30.7 bits (70), Expect = 0.30
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 97 NHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ GET + C +C KSFT + L H ++ +
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVH-QRSCS 35
Score = 30.7 bits (70), Expect = 0.32
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE C C KSF Q L H +RS
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVH-QRSC 34
Score = 29.9 bits (68), Expect = 0.62
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPY 795
+ G+ ++C CG F R ++ H + S P
Sbjct: 2 SSGSS-GGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 29.6 bits (67), Expect = 0.86
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 1403 HVCNTCGNEYNTRKNLLSHMKIHSTGRPH 1431
++C CG + R +L H + S P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 29.6 bits (67), Expect = 0.93
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
Y C C K++T+ L H
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 28.8 bits (65), Expect = 1.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1777 KNHICEICGKSFKKKDLLREHMIVHSTLRPF 1807
++C CGKSF ++ L H S P
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 28.4 bits (64), Expect = 2.4
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
P+LC C F R L H R+ + P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39
Score = 27.6 bits (62), Expect = 4.7
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 1475 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1514
S S + Y C C K T R ++ HQR P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPS 40
Score = 27.6 bits (62), Expect = 4.7
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 1599 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1638
S S + Y C C K T R ++ HQR P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCSQSGPS 40
Score = 27.2 bits (61), Expect = 6.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 463 HICQTCGSEFHTRKNLLTHIRTHN 486
++C CG F R +L H R+ +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCS 35
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 48.0 bits (115), Expect = 2e-07
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
T K ++C CGK+F HL RH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
Score = 43.7 bits (104), Expect = 9e-06
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ T + Y C+ CGK+F HL RH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
Score = 41.8 bits (99), Expect = 4e-05
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+ T K Y C CGK FT+ H+ H+ +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 1531 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
T K Y C +CG +FT+ L H+ H+
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
Score = 41.4 bits (98), Expect = 5e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 1655 DHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
T K Y C +CG +FT+ L H+ H+
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
Score = 39.9 bits (94), Expect = 2e-04
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 1502 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
K Y C+ CG + L H +IHT +
Sbjct: 2 SSGS-SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 39.9 bits (94), Expect = 2e-04
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 1626 DHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
K Y C+ CG + L H +IHT +
Sbjct: 2 SSGS-SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 39.5 bits (93), Expect = 2e-04
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 339 EHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S T K Y C CGK+F L H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
Score = 37.2 bits (87), Expect = 0.002
Identities = 9/29 (31%), Positives = 10/29 (34%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
T K Y C CG +F L H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
Score = 36.8 bits (86), Expect = 0.003
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ + Y C C +F L RH KIH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.9 bits (81), Expect = 0.010
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Query: 1969 AVHEKI----RDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVC 2007
+ + C C +AF +++L H +IHT +
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 33.3 bits (77), Expect = 0.038
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
Y C C +R L +H ++HT + S
Sbjct: 9 DSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 32.2 bits (74), Expect = 0.091
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ ++ +S+ C+ C F LT H+K H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 31.8 bits (73), Expect = 0.13
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 1796 EHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
+ + + C C F HL +H + HT
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
Score = 31.8 bits (73), Expect = 0.15
Identities = 10/42 (23%), Positives = 12/42 (28%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S K Y C CG F L H+ H +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 31.4 bits (72), Expect = 0.19
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C+ C FTR L H + HT +
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 31.4 bits (72), Expect = 0.20
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYK 1235
++ +C C K+F ++ LT H K
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 31.4 bits (72), Expect = 0.21
Identities = 9/37 (24%), Positives = 13/37 (35%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
K Y C CG F L H+ H+++
Sbjct: 7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 30.2 bits (69), Expect = 0.46
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y C++C K +TR + L H +H + S
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 29.1 bits (66), Expect = 1.2
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ T K + C+ C + F L H +++H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIH 35
Score = 29.1 bits (66), Expect = 1.3
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+ + Y C+ C K F L+ H +++H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIH 35
Score = 28.7 bits (65), Expect = 1.9
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVC 274
K + C EC +++ L +H +HT +
Sbjct: 9 DSK-SYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 28.3 bits (64), Expect = 2.9
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ + + C+ CG F ++ RH K+H+ +
Sbjct: 2 SSGSSG-TDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 27.2 bits (61), Expect = 5.8
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
+ Y C C +F R L H HT + +
Sbjct: 9 DSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 26.8 bits (60), Expect = 7.9
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ ++C+EC K+FT L H +K+HT
Sbjct: 7 GTDSKSYNCNECGKAFTRIFHLTRH-QKIHT 36
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 47.9 bits (115), Expect = 2e-07
Identities = 15/70 (21%), Positives = 18/70 (25%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
+ K C CG+ F T S+L H R
Sbjct: 2 SSGSSGSSTKSHQCHECGRGF----------------------------TLKSHLNQHQR 33
Query: 1339 NHTGEKKYVC 1348
HTGEK
Sbjct: 34 IHTGEKPSGP 43
Score = 47.2 bits (113), Expect = 5e-07
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 1504 QRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S K ++C CG G + K L+ H RIHTGEK
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 47.2 bits (113), Expect = 5e-07
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 1628 QRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S K ++C CG G + K L+ H RIHTGEK
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ + + + C CG+ F K HLN+H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ + K + C CG+GFT + H+ H+ E+ S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 1e-05
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
S + K + C CG+ F LK LN H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31
Score = 41.4 bits (98), Expect = 6e-05
Identities = 16/72 (22%), Positives = 20/72 (27%), Gaps = 29/72 (40%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
S K + CH C + F S +L H R
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKS-----------------------------HLNQHQR 33
Query: 1998 IHTGEKKYVCET 2009
IHTGEK +
Sbjct: 34 IHTGEKPSGPSS 45
Score = 39.8 bits (94), Expect = 2e-04
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+ K + C +CG FT + L H+ H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+ K + C +CG FT + L H+ H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCT 437
S K + C CG GF KS L H+ H ++ +
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCS 741
+ K + C CG GF KS L+ H+ H+ E+ S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 8e-04
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
++C C + L QH R+HTGEKP
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIH 2023
+ K + C CG F LN H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQH 31
Score = 36.8 bits (86), Expect = 0.003
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S+ + + C C F K L +H +IH G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 36.4 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ + K C C RGF +K+ LN+H +R+H
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIH 35
Score = 35.2 bits (82), Expect = 0.009
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
++CH C FT L H R HTG++P
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.031
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCS 275
K +C EC R + S L +H +HTGEK S
Sbjct: 9 STK-SHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.032
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
S+ + C C GF + HL QH R HT KP
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP 40
Score = 33.3 bits (77), Expect = 0.047
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ S H C CG F + ++ +H ++H+ E+P
Sbjct: 3 SGSSG-SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.087
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
S + + C C + F +K+ L++H +R+H
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIH 35
Score = 30.6 bits (70), Expect = 0.37
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ S +S +C C F L +H++ H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 29.8 bits (68), Expect = 0.87
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTC 712
+QC+ CGR + ++ H H GEK
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 1474 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1518
S SS SS K ++C C + T + ++ HQR +H KP +
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 1.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDT 1642
S SS SS K ++C C + T + ++ HQR +H KP +
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTGEKPSGPSS 45
Score = 29.1 bits (66), Expect = 1.3
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
S C EC + FT K L +H +++HT
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQH-QRIHT 36
Score = 29.1 bits (66), Expect = 1.4
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 1392 HKKTHVLSDVK-HVCNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
+ S K H C+ CG + + +L H +IH+ +P
Sbjct: 3 SGSSG--SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 2.4
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSCT 1218
++C +C + +T L H +H GE+ +
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 7.1
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1769 THMVVHSN-KNHICEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
+ S+ K+H C CG+ F K L +H +H+ +P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 47.1 bits (113), Expect = 5e-07
Identities = 14/40 (35%), Positives = 15/40 (37%)
Query: 1505 RSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S PYEC CG + K L H R H GE
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 47.1 bits (113), Expect = 5e-07
Identities = 14/40 (35%), Positives = 15/40 (37%)
Query: 1629 RSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S PYEC CG + K L H R H GE
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 46.0 bits (110), Expect = 1e-06
Identities = 14/67 (20%), Positives = 17/67 (25%), Gaps = 28/67 (41%)
Query: 1282 RLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHT 1341
+GE P+ C CGK+F L H R H
Sbjct: 3 SGSSGENPYECSECGKAF----------------------------NRKDQLISHQRTHA 34
Query: 1342 GEKKYVC 1348
GE
Sbjct: 35 GESGPSS 41
Score = 41.3 bits (98), Expect = 5e-05
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 1338 RNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+GE Y C CGK F + H+ TH+ E
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 41.3 bits (98), Expect = 6e-05
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
+GE PY C CGK+F K +L +H + H G G
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISH-QRTHAGESGPSS 41
Score = 40.2 bits (95), Expect = 1e-04
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+G+ PY C CGK+F K L H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISH 29
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C +R D L H R H GE S
Sbjct: 7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.0 bits (92), Expect = 3e-04
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C F R D L H RTH G+ +
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.0 bits (92), Expect = 4e-04
Identities = 15/67 (22%), Positives = 15/67 (22%), Gaps = 29/67 (43%)
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHT 2000
SGE Y C C K F R L H R H
Sbjct: 4 GSSGENPYECSECGKAFNRKD-----------------------------QLISHQRTHA 34
Query: 2001 GEKKYVC 2007
GE
Sbjct: 35 GESGPSS 41
Score = 38.6 bits (91), Expect = 4e-04
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GE Y C +CG +F + L H+ +H+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34
Score = 38.6 bits (91), Expect = 4e-04
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
+GE Y C +CG +F + L H+ +H+
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/38 (31%), Positives = 14/38 (36%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
GE Y C CG F K L H+ TH +
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 35.2 bits (82), Expect = 0.009
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
GE Y C CG F K L H+ +H+ E
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 34.8 bits (81), Expect = 0.010
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 787 KVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E PY C C +F K L+ H + H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAG 35
Score = 33.3 bits (77), Expect = 0.043
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GE Y C CG +F L H +H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 32.1 bits (74), Expect = 0.089
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 1476 ESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S S + YEC C K + +I HQR H
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS 41
Score = 32.1 bits (74), Expect = 0.089
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 1600 ESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S S + YEC C K + +I HQR H
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQR-THAGESGPSS 41
Score = 31.7 bits (73), Expect = 0.12
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVC 274
GE ++C EC +++ +L H H GE
Sbjct: 7 GEN-PYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 31.7 bits (73), Expect = 0.13
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 757 EQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
SG+ + C CG FN + ++ H + H+ E
Sbjct: 2 SSGS-SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 31.3 bits (72), Expect = 0.17
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 316 GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
G Y+C C +F R + L H +H GE +
Sbjct: 7 GENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 30.6 bits (70), Expect = 0.34
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE Y CS C K F K++L H +R H
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISH-QRTH 33
Score = 30.2 bits (69), Expect = 0.51
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYTC 712
Y+C+ CG+ + H H GE +
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.8 bits (68), Expect = 0.67
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+GE + CS C + F K++L H +R H
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISH-QRTH 33
Score = 29.0 bits (66), Expect = 1.2
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C+ CG +N + L+SH + H+
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 28.6 bits (65), Expect = 1.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
S P+ C C F + L+ H RTH
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISHQRTHA 34
Score = 28.2 bits (64), Expect = 2.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
S E ++CS C F L H++TH
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 28.2 bits (64), Expect = 2.8
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE C+ C K+F + +L H +R+H
Sbjct: 5 SSGENPYECSECGKAFNRKDQLISH-QRTH 33
Score = 27.5 bits (62), Expect = 4.9
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 95 RDNHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE + C EC K+F K L H ++ H
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISH-QRTHA 34
Score = 27.5 bits (62), Expect = 5.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+CS+C K + R +L H H GE S
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 26.7 bits (60), Expect = 9.5
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 1781 CEICGKSFKKKDLLREHMIVHSTLRPFLC 1809
C CGK+F +KD L H H+
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 46.3 bits (111), Expect = 1e-06
Identities = 13/70 (18%), Positives = 18/70 (25%), Gaps = 28/70 (40%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMR 1338
TGE P+ C CGK F + L H +
Sbjct: 2 SSGSSGTGENPYECCECGKVF----------------------------SRKDQLVSHQK 33
Query: 1339 NHTGEKKYVC 1348
H+G+
Sbjct: 34 THSGQSGPSS 43
Score = 45.2 bits (108), Expect = 3e-06
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 1504 QRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
S PYEC CG S K L H + H+G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 45.2 bits (108), Expect = 3e-06
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 1628 QRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
S PYEC CG S K L H + H+G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ TG+ PY C CGK F K L H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH 31
Score = 41.7 bits (99), Expect = 4e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+ TGE Y C CGK F++ H+ THS +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLG-KGYRC 380
S TGE PY C CGK F K +L +H K H G G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH-QKTHSGQSGPSS 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
TGE Y C +CG F++ L H+ +HS
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36
Score = 39.4 bits (93), Expect = 3e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
TGE Y C +CG F++ L H+ +HS
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y+C C + SR D L H + H+G+ S
Sbjct: 9 GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 38.2 bits (90), Expect = 7e-04
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y+C C +F+R D L H +TH+G +
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/71 (18%), Positives = 18/71 (25%), Gaps = 29/71 (40%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHM 1996
+ +GE Y C C KVF R L H
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKD-----------------------------QLVSHQ 32
Query: 1997 RIHTGEKKYVC 2007
+ H+G+
Sbjct: 33 KTHSGQSGPSS 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
S GE Y C CG F+ K L H+ TH
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 35.6 bits (83), Expect = 0.007
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
+ GE Y C CG F K L H+ +HS +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 35.6 bits (83), Expect = 0.007
Identities = 13/35 (37%), Positives = 14/35 (40%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E PY C C F K LV H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 34.0 bits (79), Expect = 0.022
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
TGE Y C CG F L H +H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 32.1 bits (74), Expect = 0.12
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE Y C C K F K++L H ++ H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH-QKTH 35
Score = 31.3 bits (72), Expect = 0.19
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ TGE + C C + F K++L H ++ H
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSH-QKTH 35
Score = 29.8 bits (68), Expect = 0.62
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1475 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1516
S SS + + YEC C K + + ++ HQ+ H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.62
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 1599 SESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYEC 1640
S SS + + YEC C K + + ++ HQ+ H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK-THSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.70
Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 756 HEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYIC 797
+ +G+ + C CG F+ + ++ H K HS +
Sbjct: 3 SGSSG-TGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.83
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTC 352
Y+C C F R + L H +H+G+ +
Sbjct: 13 YECCE--CGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVC 274
GE ++C EC + + +L H H+G+
Sbjct: 9 GEN-PYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 28.6 bits (65), Expect = 1.9
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E ++C C F L H+KTH
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 28.2 bits (64), Expect = 2.6
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE C C K F + +L H +++H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH-QKTH 35
Score = 27.8 bits (63), Expect = 3.4
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y+C +C K ++R +L H H G+ S
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 27.8 bits (63), Expect = 4.2
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 1405 CNTCGNEYNTRKNLLSHMKIHSTGRPHQC 1433
C CG ++ + L+SH K HS
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 27.1 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+GE + C EC K F+ K L H +K H+
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSH-QKTHS 36
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 46.0 bits (110), Expect = 1e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1542
+ YEC CG K SL H RIHTG
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 46.0 bits (110), Expect = 1e-06
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKY 1666
+ YEC CG K SL H RIHTG
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 28/63 (44%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGE 1343
+G++ + CQ CGKSF +L +H R HTG
Sbjct: 5 SSGQRVYECQECGKSF----------------------------RQKGSLTLHERIHTGS 36
Query: 1344 KKY 1346
Sbjct: 37 GPS 39
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+G R Y C CGKSF K L H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLH 29
Score = 39.9 bits (94), Expect = 2e-04
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAH 368
+G++ Y C+ CGKSF K L H
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLH 29
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
+G++ Y CQ+CG SF Q SL H+ H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
+G++ Y CQ+CG SF Q SL H+ H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 37.2 bits (87), Expect = 0.002
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKY 2005
++C+ C ++F +L LH RIHTG
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.8 bits (86), Expect = 0.002
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFS 1291
G+ Y+C C + SL H R+HTG P S
Sbjct: 7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 36.8 bits (86), Expect = 0.002
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYT 655
Y+C C F + SL LH R HTG P +
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 36.0 bits (84), Expect = 0.004
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1338 RNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEER 1372
+G++ Y C+ CGK F Q S H+ H+
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 34.1 bits (79), Expect = 0.022
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 786 TKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ S +R Y C+ C SF++K SL H +IH G
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTG 35
Score = 33.7 bits (78), Expect = 0.030
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIH 2023
+G++ Y C+ CG SF GSL +H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLH 29
Score = 32.9 bits (76), Expect = 0.053
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
G++ Y C+ CG F K SL H H
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 32.2 bits (74), Expect = 0.095
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 703 NHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
G++ Y C+ CG F K SL H+ H+
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 30.6 bits (70), Expect = 0.36
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
G++V ++C EC +S+ L H +HTG
Sbjct: 7 GQRV-YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 30.6 bits (70), Expect = 0.37
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 320 YKCPHPGCPSSFQRFNALQEHMLSHTGEKPYT 351
Y+C C SF++ +L H HTG P +
Sbjct: 11 YECQE--CGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 29.5 bits (67), Expect = 0.88
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SG+R Y C C K F K L+ H R+H
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLH-ERIH 33
Score = 28.7 bits (65), Expect = 1.6
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
G+R C C KSF Q LT H +R H
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLH-ERIH 33
Score = 28.7 bits (65), Expect = 1.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 769 CDTCGSEFNTRKNMLRHTKVHSTERPY 795
C CG F + ++ H ++H+ P
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 28.7 bits (65), Expect = 1.8
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 1805 RPFLCEFCNAGFKCRKHLLQHYRTHT--KP 1832
R + C+ C F+ + L H R HT P
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSGP 38
Score = 28.7 bits (65), Expect = 1.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 1476 ESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1514
S S +++YEC C K + ++ H+R +H P
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGPS 39
Score = 28.7 bits (65), Expect = 1.8
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 1600 ESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1638
S S +++YEC C K + ++ H+R +H P
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHER-IHTGSGPS 39
Score = 28.3 bits (64), Expect = 2.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
S +R ++C C +FR +LT H++ H
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 28.3 bits (64), Expect = 2.4
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+G++ + C C + F K L H +R+H
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLH-ERIH 33
Score = 27.9 bits (63), Expect = 3.1
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 97 NHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SG+ + C EC KSF K L H +++HT
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLH-ERIHT 34
Score = 27.5 bits (62), Expect = 4.5
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 682 YQCNICGRVMSDSTNFKDHLDNHKGEKKYT 711
Y+C CG+ + H H G +
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 26.8 bits (60), Expect = 8.5
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
Y+C +C K++ + L H +H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR {Homo
sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 47.6 bits (112), Expect = 2e-06
Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 1975 RDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVC 2034
+QC++C+ + H R+ VC C F H + C
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTC 72
Query: 2035 SFCGNTYKNPKSLDSHIRNSHTNRKKSICDDCT 2067
C T+K+ S+ H H + +
Sbjct: 73 LECMRTFKSSFSIWRHQVEVHNQNNMAPTSGPS 105
Score = 46.0 bits (108), Expect = 7e-06
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 4/81 (4%)
Query: 705 KGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGD 764
+ ++ Y C +C H+ C +C ++ SP+ +EHE
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYK- 68
Query: 765 IKHICDTCGSEFNTRKNMLRH 785
K C C F + ++ RH
Sbjct: 69 -KLTCLECMRTFKSSFSIWRH 88
Score = 45.3 bits (106), Expect = 1e-05
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 735 ERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERP 794
+ ++QC C K S HE+ R+ +C C F + + + + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFS-PELKQEHESKCEYKK 69
Query: 795 YICEYCNVSFKEKKSLVRH 813
C C +FK S+ RH
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 42.6 bits (99), Expect = 1e-04
Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Query: 1944 GEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
++ Y C +CN +H + C C FF + H K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEHES-KCEYK 68
Query: 2004 KYVCETCGASFVHWGSLNIH 2023
K C C +F S+ H
Sbjct: 69 KLTCLECMRTFKSSFSIWRH 88
Score = 42.2 bits (98), Expect = 1e-04
Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 2/83 (2%)
Query: 1743 KKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSNKNHICEICGKSFKKKDLLREHMIVHS 1802
++ C C ++ +H + N +C C F +L +EH
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE-SKC 65
Query: 1803 TLRPFLCEFCNAGFKCRKHLLQH 1825
+ C C FK + +H
Sbjct: 66 EYKKLTCLECMRTFKSSFSIWRH 88
Score = 41.4 bits (96), Expect = 2e-04
Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 1306 KRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHK 1365
+ + K YQC +C L+ H R VC C F H+
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE 62
Query: 1366 FTHSEERSFKCSYCAMTFRCPRTLTEHKKT 1395
+ E + C C TF+ ++ H+
Sbjct: 63 -SKCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 41.4 bits (96), Expect = 2e-04
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 346 GEKPYTCEACGKSFPLKRRLNAHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEKK 405
++ Y C C +H C C + ++H +S KK
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 406 YTCETCGTGFAYKSSLYHHRFT 427
TC C F S++ H+
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVE 91
Score = 40.7 bits (94), Expect = 5e-04
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 1481 SKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
+K++Y+C +C ++++ H+R C C S + +H K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEH-ESKCEYK 68
Query: 1541 KYVCQQCGASFTQWASLFYHK 1561
K C +C +F S++ H+
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQ 89
Score = 40.7 bits (94), Expect = 5e-04
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 1605 SKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
+K++Y+C +C ++++ H+R C C S + +H K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEH-ESKCEYK 68
Query: 1665 KYVCQQCGASFTQWASLFYHK 1685
K C +C +F S++ H+
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQ 89
Score = 40.7 bits (94), Expect = 5e-04
Identities = 15/80 (18%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Query: 650 GDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDNHKGEKK 709
Y C +C + H C C ++H ++ KK
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNAA--VCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 710 YTCEICGTGFMYKSSLHHHK 729
TC C F S+ H+
Sbjct: 70 LTCLECMRTFKSSFSIWRHQ 89
Score = 40.3 bits (93), Expect = 8e-04
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 1256 IEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMK 1315
+E + Y+C LC + S H RL C C F + E + H + K
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYK 68
Query: 1316 VGYQCNVCGRVLTDSSNLKVH 1336
C C R S ++ H
Sbjct: 69 K-LTCLECMRTFKSSFSIWRH 88
Score = 39.9 bits (92), Expect = 8e-04
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 367 AHYNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRF 426
+ + + Y+C +C + +S+ H R C C F H
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHE- 62
Query: 427 THIKDRTYPCTYCERKYQSPKTLKEH 452
+ + + C C R ++S ++ H
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRH 88
Score = 39.1 bits (90), Expect = 0.002
Identities = 16/79 (20%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 431 DRTYPCTYCERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRT 490
Y C C K S H ++ +C C F + + H + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC---RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 491 HVCELCNANLKTRRSLLRH 509
C C K+ S+ RH
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 38.7 bits (89), Expect = 0.003
Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 3/87 (3%)
Query: 614 KSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHY 673
S V+ Y+C +C++ + H R C C F + + H
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH- 61
Query: 674 NCSHAGFGYQCNICGRVMSDSTNFKDH 700
C C R S + H
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRH 88
Score = 38.7 bits (89), Expect = 0.003
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Query: 1286 GEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGEKK 1345
++ + C++C ++ H C C + H KK
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHES-KCEYKK 69
Query: 1346 YVCEICGKGFTQWASHYYHKFT 1367
C C + F S + H+
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVE 91
Score = 38.0 bits (87), Expect = 0.005
Identities = 16/105 (15%), Positives = 27/105 (25%), Gaps = 24/105 (22%)
Query: 573 GERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHICD 632
+ Y C +C+ H R C C
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCR-----------------------NAAVCPYCS 49
Query: 633 SIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSH 677
F + + H + + TC C ++F + + RH H
Sbjct: 50 LRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 36.8 bits (84), Expect = 0.012
Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Query: 1714 HEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVV 1773
+ C LC + H + VC YC + +P + H
Sbjct: 12 ENKEVYQCRLCNAK----LSSLLEQGSHERLCRN---AAVCPYCSLRFFSPELKQEHESK 64
Query: 1774 HSNKNHICEICGKSFKKKDLLREH 1797
K C C ++FK + H
Sbjct: 65 CEYKKLTCLECMRTFKSSFSIWRH 88
Score = 36.0 bits (82), Expect = 0.022
Identities = 23/118 (19%), Positives = 34/118 (28%), Gaps = 25/118 (21%)
Query: 61 LREKSAVEIDGEIKFQCPDCHTMMKNFAYLKKHVRDNHSGETFSCDECSKSFTTKKCLRE 120
A ++ + +QC C+ + + H R C CS F + + +E
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQE 60
Query: 121 HYKKLHTIRIRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRFQGLREHIVSVHAQ 178
H K K C EC K + H V VH Q
Sbjct: 61 HESK-----------------------CEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95
Score = 36.0 bits (82), Expect = 0.023
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 6/96 (6%)
Query: 1766 NLRTHMVVHSNKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQH 1825
V + + + C +C H + +C +C+ F + +H
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEH 61
Query: 1826 YRTHTKPKATNSFSSSKCEESFDNCNNLWSHMFIKH 1861
K + +C +F + ++W H H
Sbjct: 62 ESKCEYKK----LTCLECMRTFKSSFSIWRHQVEVH 93
Score = 35.6 bits (81), Expect = 0.026
Identities = 15/104 (14%), Positives = 28/104 (26%), Gaps = 22/104 (21%)
Query: 1210 RGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKCPLCPS 1269
+ C +C+ + H + CP C
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR---------------------NAAVCPYCSL 50
Query: 1270 ITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
+ Q+H K +C C ++F + + RH +H
Sbjct: 51 RFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 35.6 bits (81), Expect = 0.029
Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 4/82 (4%)
Query: 1342 GEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDV 1401
++ Y C +C + H+ + C YC++ F P EH+
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKC--EYK 68
Query: 1402 KHVCNTCGNEYNTRKNLLSHMK 1423
K C C + + ++ H
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQV 90
Score = 34.9 bits (79), Expect = 0.051
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQ- 1694
+ Y+C C LSS H R+ VC C F H+ +
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTC 72
Query: 1695 -KCEESFDNCNNLWSHMFIKH 1714
+C +F + ++W H H
Sbjct: 73 LECMRTFKSSFSIWRHQVEVH 93
Score = 34.5 bits (78), Expect = 0.071
Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 546 RIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
R CP C + S + H E +K TC C + F + H VH
Sbjct: 40 RNAAVCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 34.5 bits (78), Expect = 0.080
Identities = 18/106 (16%), Positives = 29/106 (27%), Gaps = 25/106 (23%)
Query: 268 GEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNVDGVRKYKCPHPGC 327
++ + C +C H + + CP+ C
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRN----------------------AAVCPY--C 48
Query: 328 PSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWH 373
F QEH S K TC C ++F + H + H
Sbjct: 49 SLRFFSPELKQEHE-SKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 34.5 bits (78), Expect = 0.083
Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Query: 225 KIFNVNKEDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMK 284
+ E + + CP C + + ++H + K C C R F
Sbjct: 24 AKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSS 82
Query: 285 NRLNEHYKRVHHMN 298
+ H VH+ N
Sbjct: 83 FSIWRHQVEVHNQN 96
Score = 31.0 bits (69), Expect = 1.3
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 1085 KFQCPHCNINHDDLVSLKQHIVEAHVPSISCSHCEMKFKNLKDFKEHMTSVH 1136
CP+C++ ++H + ++C C FK+ H VH
Sbjct: 42 AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 30.6 bits (68), Expect = 1.9
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Query: 1914 VDGAIRFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEK 1973
V+ ++C C L + +H + C C+ F + H +
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE--SKCE 66
Query: 1974 IRDFQCKVCDRAFFDVYNLKLH 1995
+ C C R F +++ H
Sbjct: 67 YKKLTCLECMRTFKSSFSIWRH 88
Score = 30.3 bits (67), Expect = 2.4
Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 1/90 (1%)
Query: 1419 LSHMKIHSTGRPHQCDVCNAKFKLRKYLKHVSASSCHQKVPNKSVTAKFKALFTERSESS 1478
S +QC +CNAK C + +F + ++ S
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGS-HERLCRNAAVCPYCSLRFFSPELKQEHES 63
Query: 1479 ESSKKIYECDICKKQVTNRKNMIDHQRSVH 1508
+ K C C + + ++ HQ VH
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 29.9 bits (66), Expect = 3.5
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFT 300
++C C + E H + VC C FF EH + + T
Sbjct: 17 YQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLT 71
Score = 29.5 bits (65), Expect = 3.6
Identities = 11/76 (14%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 1371 ERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEYNTRKNLLSHMKIHSTGRP 1430
+ ++C C H++ VC C + + + H + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC---RNAAVCPYCSLRFFSPELKQEH-ESKCEYKK 69
Query: 1431 HQCDVCNAKFKLRKYL 1446
C C FK +
Sbjct: 70 LTCLECMRTFKSSFSI 85
Score = 29.1 bits (64), Expect = 5.0
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 1086 FQCPHCNINHDDLVSLKQHIVEAHVPSISCSHCEMKFKNLKDFKEHMTSVHLNK 1139
+QC CN L+ H + C +C ++F + + +EH + K
Sbjct: 17 YQCRLCNAKLSSLLEQGSH-ERLCRNAAVCPYCSLRFFSPELKQEHESKCEYKK 69
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 47.6 bits (112), Expect = 3e-06
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 10/112 (8%)
Query: 1210 RGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSE--------ICIEGETK 1261
+ + + + + +LT KR R V + + + + + ++
Sbjct: 15 SNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQ 74
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
+ CPLC S SL+QH+R E C VC K F + + H H
Sbjct: 75 FVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 43.8 bits (102), Expect = 7e-05
Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 27/146 (18%)
Query: 310 TETNVD-GVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
TE++VD G +KY H G + H L+ ++
Sbjct: 2 TESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIV-------------- 47
Query: 369 YNKWHLGKGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
+ I + + +++ L + + ++ C C F+ SL H
Sbjct: 48 ----------KTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT 97
Query: 429 IKDRTYPCTYCERKYQSPKTLKEHLK 454
+ T C C++++ S + +H+
Sbjct: 98 --EHTKVCPVCKKEFTSTDSALDHVC 121
Score = 42.2 bits (98), Expect = 2e-04
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 618 ISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSH 677
++ ++++ C +C F+ SL+ H+R C VC K F + H H
Sbjct: 67 LASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKH 124
Query: 678 AG 679
Sbjct: 125 NI 126
Score = 42.2 bits (98), Expect = 3e-04
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 6/123 (4%)
Query: 1934 GLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLK 1993
G K +L H G H+ + R+ L K + I + + + D +
Sbjct: 9 GSKKYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAI--VKTLIHNPQLLDESSYL 63
Query: 1994 LHMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHINAQFVCSFCGNTYKNPKSLDSHIRN 2053
+ ++VC C F SL H + VC C + + S H+
Sbjct: 64 YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT-KVCPVCKKEFTSTDSALDHVCK 122
Query: 2054 SHT 2056
H
Sbjct: 123 KHN 125
Score = 41.8 bits (97), Expect = 3e-04
Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 13/119 (10%)
Query: 698 KDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC---SFCEKKYMSPKTLK 754
K +L NHKG + +H+ + ++R+ + + + ++
Sbjct: 11 KKYLSNHKG--------IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSY 62
Query: 755 EHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRH 813
+ + +C C F++ ++ +H + TE +C C F S + H
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDH 119
Score = 41.1 bits (95), Expect = 6e-04
Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 7/121 (5%)
Query: 1277 LQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVH 1336
++++ H G V + R H ++ + + L D S+
Sbjct: 10 SKKYLSNHKG---IFIHVTLEELK-RYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYR 65
Query: 1337 MRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEH-KKT 1395
+ ++VC +C F+ S H E + C C F + +H K
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQH--IRYTEHTKVCPVCKKEFTSTDSALDHVCKK 123
Query: 1396 H 1396
H
Sbjct: 124 H 124
Score = 41.1 bits (95), Expect = 6e-04
Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 5/124 (4%)
Query: 1738 LERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSNKNHICEICGKSFKKKDLLREH 1797
++ KK+ + + L I +
Sbjct: 6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYR 65
Query: 1798 MIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPKATNSFSSSKCEESFDNCNNLWSHM 1857
++ + F+C C F L QH R K C++ F + ++ H+
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-----VCPVCKKEFTSTDSALDHV 120
Query: 1858 FIKH 1861
KH
Sbjct: 121 CKKH 124
Score = 40.3 bits (93), Expect = 0.001
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 548 KYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVS 605
++ CPLC ++S K+H E C +C K F + +H + H + VS
Sbjct: 74 QFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNICVS 129
Score = 39.9 bits (92), Expect = 0.001
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 691 MSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSP 750
+ D +++ L K ++ C +C F SL H ++ C C+K++ S
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTST 113
Query: 751 KTLKEHEQTHRSG 763
+ +H +
Sbjct: 114 DSALDHVCKKHNI 126
Score = 39.1 bits (90), Expect = 0.003
Identities = 26/126 (20%), Positives = 43/126 (34%), Gaps = 14/126 (11%)
Query: 257 SELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVHHMNFTSRDHDLRRETETNV-- 314
S KK+L+ H G V ++L KR+ + H+ + E++
Sbjct: 8 SGSKKYLSNHKG---IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64
Query: 315 -----DGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHY 369
+ ++ CP C F +L++H+ E C C K F H
Sbjct: 65 RLLASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHV 120
Query: 370 NKWHLG 375
K H
Sbjct: 121 CKKHNI 126
Score = 38.8 bits (89), Expect = 0.004
Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYP 435
KG H+ + T +SS + +
Sbjct: 18 KGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSYLYRLLASKAISQFV 76
Query: 436 CTYCERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHI-RTHN 486
C C + S +LK+H++ +C C EF + + L H+ + HN
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTEH---TKVCPVCKKEFTSTDSALDHVCKKHN 125
Score = 38.0 bits (87), Expect = 0.006
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Query: 1163 MHAPNRTVESDREKYKLVEGDQVRYKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMCDK 1222
+H P ES L ++ C C ++ LK H+ E T C +C K
Sbjct: 51 IHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKK 108
Query: 1223 SFYQVSRLTEHYKRSHRMKVT 1243
F +H + H + V+
Sbjct: 109 EFTSTDSALDHVCKKHNICVS 129
Score = 36.8 bits (84), Expect = 0.015
Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 1563 SHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRK 1622
S ++ ++K++S ++ L E+ + K I Q+ +
Sbjct: 4 SDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTL---IHNPQLLDES 60
Query: 1623 NMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLF 1682
+ + + + + + C C SS SL H R E VC C FT S
Sbjct: 61 SYLYRLLA-SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSAL 117
Query: 1683 YH 1684
H
Sbjct: 118 DH 119
Score = 36.8 bits (84), Expect = 0.016
Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 3/106 (2%)
Query: 1455 HQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPY 1514
H+ + + K E + I + I Q+ + + + + + + +
Sbjct: 17 HKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA-SKAISQF 75
Query: 1515 ECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYH 1560
C C SS SL H R E VC C FT S H
Sbjct: 76 VCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119
Score = 36.5 bits (83), Expect = 0.023
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 7/117 (5%)
Query: 398 DSHRGEKKYTCETCGTGFAY--KSSLYHHRFTHIKDRTYPC---TYCERKYQSPKTLKEH 452
D G KKY G + +H+ T + R T ++ +
Sbjct: 5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64
Query: 453 LKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRH 509
+ + + +C C F + +L HIR + T VC +C + S L H
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDH 119
Score = 36.1 bits (82), Expect = 0.033
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 56 LTEEELREKSAVEIDGEIKFQCPDCHTMMKNFAYLKKHVRDNHSGETFSCDECSKSFTTK 115
L +E + +F CP C + LK+H+R T C C K FT+
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTST 113
Query: 116 KCLREHYKKLHTI 128
+H K H I
Sbjct: 114 DSALDHVCKKHNI 126
Score = 35.7 bits (81), Expect = 0.049
Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 8/124 (6%)
Query: 1535 IHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSASSCHQKVPNKSVTAKFKAL 1594
+ +G KKY+ G +L K H T QK + + + N + + L
Sbjct: 6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63
Query: 1595 FTERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLD 1654
+ + + + C +C ++ ++ H R C C +S S
Sbjct: 64 YRLLASKAI---SQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSAL 117
Query: 1655 DHYR 1658
DH
Sbjct: 118 DHVC 121
Score = 35.3 bits (80), Expect = 0.052
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 243 KFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+F CP C + + LK+H+ K VC VC++ F + +H + H
Sbjct: 74 QFVCPLCLMPFSSSVSLKQHIRYTEHTK--VCPVCKKEFTSTDSALDHVCKKH 124
Score = 33.8 bits (76), Expect = 0.17
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 1069 HEEHLNKSTIIVDGVVKFQCPHCNINHDDLVSLKQHIVEAHVPSISCSHCEMKFKNLKDF 1128
E + + +F CP C + VSLKQHI + C C+ +F +
Sbjct: 58 DESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV-CPVCKKEFTSTDSA 116
Query: 1129 KEHMTSVH 1136
+H+ H
Sbjct: 117 LDHVCKKH 124
Score = 33.4 bits (75), Expect = 0.26
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 1919 RFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH 1971
+F CP C + LK H+ E C +C K F + +H+ H
Sbjct: 74 QFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH 124
Score = 33.0 bits (74), Expect = 0.33
Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 7/117 (5%)
Query: 1884 LLVRHMKKHHTMQLSISS---VSKHIKSKTQIFVDGAIRFKCPDCPTILQTFRGLKAHLD 1940
+++ H + + ++ H + Q + AI P +L L L
Sbjct: 9 GSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA 68
Query: 1941 IHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMR 1997
+ + + C +C F +L+ H+ C VC + F + H+
Sbjct: 69 SKAISQ-FVCPLCLMPFSSSVSLKQHI---RYTEHTKVCPVCKKEFTSTDSALDHVC 121
Score = 33.0 bits (74), Expect = 0.36
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 1647 LSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRN-QKCEESFDNCNN 1705
L + S ++VC C F+ SL H T+ C++ F + ++
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDS 115
Query: 1706 LWSHMFIKH 1714
H+ KH
Sbjct: 116 ALDHVCKKH 124
Score = 31.1 bits (69), Expect = 1.8
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 148 EGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGAAFGLARRLKTHYIRRHTV 207
+ + ++ CP C L++HI VC VC F H ++H +
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 30.3 bits (67), Expect = 2.6
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 1478 SESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYR 1534
+ + + C +C ++ ++ H R C C +S S DH
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDHVC 121
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 44.6 bits (106), Expect = 3e-06
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 1280 HMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
R TG KPF C C +SF+ +HL H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALH 30
Score = 41.6 bits (98), Expect = 5e-05
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
R TG +P+ C C +SF HL H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALH 30
Score = 35.8 bits (83), Expect = 0.005
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSHI 2028
R TG K + C C SF L +H H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 35.4 bits (82), Expect = 0.007
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1564
R TG K + C C SF++ L H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.4 bits (82), Expect = 0.007
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSH 1688
R TG K + C C SF++ L H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.0 bits (81), Expect = 0.009
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTH 1368
R TG K + C C + F++ H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 34.2 bits (79), Expect = 0.017
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMK 1968
+G K + C C++ F R L H K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 33.8 bits (78), Expect = 0.022
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 622 GVTKYKCHICDSIFTRYDSLRLHVRTH 648
G+ ++C CD F+R D L LH + H
Sbjct: 8 GIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.8 bits (78), Expect = 0.026
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAH 368
TG KP+ C C +SF L H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALH 30
Score = 32.3 bits (74), Expect = 0.080
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 262 HLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKR 293
TG K F C C R F + L H KR
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 31.5 bits (72), Expect = 0.14
Identities = 9/34 (26%), Positives = 12/34 (35%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHI 429
G K + C C F+ L HR H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 31.5 bits (72), Expect = 0.15
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 567 HFEVHSGERKYTCSICSKCFFIKNRLSEHYRR 598
+G + + C C + F + L+ H +R
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 31.2 bits (71), Expect = 0.19
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 785 HTKVHSTERPYICEYCNVSFKEKKSLVRHYKIH 817
T+ + +P+ C C+ SF L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.8 bits (70), Expect = 0.29
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLH 1284
G ++CP C SR D L H + H
Sbjct: 8 GIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.0 bits (68), Expect = 0.58
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1971 HEKIRDFQCKVCDRAFFDVYNLKLHMRIH 1999
I+ FQC CDR+F +L LH + H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.2 bits (66), Expect = 1.1
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTH 1829
+ ++PF C C+ F HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.8 bits (65), Expect = 1.4
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSH 732
G K + C C F L H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 28.5 bits (64), Expect = 1.7
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKR 1236
G + C CD+SF + L H KR
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
Score = 28.1 bits (63), Expect = 2.8
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 728 HKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
+ + FQC C++ + L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 27.7 bits (62), Expect = 3.4
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVL 1398
+ + F+C C +F L H+K H+L
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 42.6 bits (100), Expect = 2e-05
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 1975 RDFQCKVCDRAFFDVYNLKLHMRIHTGEKKYVCETC 2010
+ C++C + F DVY+L H H+GEK Y
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 41.5 bits (97), Expect = 7e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEIC 1351
C +CG++ D +L H +H+GEK Y
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 41.1 bits (96), Expect = 7e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 625 KYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVC 659
+ C IC IF L H +H+G++PY+
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.7 bits (95), Expect = 1e-04
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 703 NHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFC 743
+ + K+ CEICG F L+ HK SHS E+ +
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.7 bits (95), Expect = 1e-04
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQC 1547
K C+ CG L+ H H+GEK Y
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.7 bits (95), Expect = 1e-04
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQC 1671
K C+ CG L+ H H+GEK Y
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.7 bits (95), Expect = 1e-04
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1775 SNKNHICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNA 1814
+ K CEICGK F+ L H + HS +P+ +
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48
Score = 39.9 bits (93), Expect = 2e-04
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 1338 RNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYCA 1380
+ K+ CEICGK F HK +HS E+ + +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 38.4 bits (89), Expect = 8e-04
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEAC 355
++ C C F+ L H LSH+GEKPY+
Sbjct: 11 KQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.0 bits (88), Expect = 0.001
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 758 QTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCN 801
+ + C+ CG F ++ RH HS E+PY +
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 37.6 bits (87), Expect = 0.001
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYC 439
S R K+ CE CG F L H+ +H ++ Y
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 37.6 bits (87), Expect = 0.001
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVC 1295
+ C +C I L +H H+GEKP+S
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.1 bits (83), Expect = 0.005
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 545 DRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICS 583
R + C +C +I+ RH HSGE+ Y+ S
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 35.7 bits (82), Expect = 0.007
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ + C++CGK F HLNRH
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRH 31
Score = 34.9 bits (80), Expect = 0.013
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 1186 RYKCSDCDKTYTRFYELKCHLMVHRGERTMSCTMC 1220
+ C C K + Y L H + H GE+ S
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 34.1 bits (78), Expect = 0.023
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 376 KGYRCHICGSTMSNAANFKDHLDSHRGEKKYTCETC 411
K C ICG + + H SH GEK Y+
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.8 bits (77), Expect = 0.029
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 240 EKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVC 277
+ + C C + + + L +H H+GEK +
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.083
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPK 1833
T + CE C F+ HL +H +H+ K
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 32.2 bits (73), Expect = 0.13
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 789 HSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
T + CE C F++ L RH H G
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSG 37
Score = 31.8 bits (72), Expect = 0.17
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 1402 KHVCNTCGNEYNTRKNLLSHMKIHSTGRPHQCDVCNA 1438
+ C CG + +L H HS +P+ +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48
Score = 31.4 bits (71), Expect = 0.25
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 1474 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTC 1519
S SS ++K C+IC K + ++ H+ S H KPY
Sbjct: 2 SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPS 46
Score = 31.4 bits (71), Expect = 0.25
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQRSVHELLKPYECDTC 1643
S SS ++K C+IC K + ++ H+ S H KPY
Sbjct: 2 SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPS 46
Score = 31.1 bits (70), Expect = 0.30
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 462 RHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNA 498
+ C+ CG F +L H +H+ ++ + +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48
Score = 31.1 bits (70), Expect = 0.32
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETR 1568
K+ C+ CG F L HK SHS +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 31.1 bits (70), Expect = 0.32
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETR 1692
K+ C+ CG F L HK SHS +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.1 bits (65), Expect = 1.4
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + C C FR L HK +H
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSH 35
Score = 29.1 bits (65), Expect = 1.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
K+ CE CG F LN H SH
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSH 35
Score = 27.6 bits (61), Expect = 5.3
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
R + ++C +C K F V L H K SH
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRH-KLSH 35
Score = 26.8 bits (59), Expect = 9.3
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 1919 RFKCPDCPTILQTFRGLKAHLDIHSGEKDYACHICN 1954
+ C C I + L H HSGEK Y+ +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 42.3 bits (100), Expect = 3e-05
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRH 1308
+GEKP+SC C ++F+ L +H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH 29
Score = 41.5 bits (98), Expect = 5e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 646 RTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+G++PY+C C ++F L +H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQH 29
Score = 40.0 bits (94), Expect = 2e-04
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAH 368
+GEKPY+C C ++F RL H
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQH 29
Score = 38.5 bits (90), Expect = 5e-04
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1544
KPY C C S L H ++HT +
Sbjct: 9 KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 38.5 bits (90), Expect = 5e-04
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVC 1668
KPY C C S L H ++HT +
Sbjct: 9 KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 36.5 bits (85), Expect = 0.002
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1534 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
+GEK Y C +C +F+ L H+ H+
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHT 34
Score = 36.5 bits (85), Expect = 0.002
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1658 RIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
+GEK Y C +C +F+ L H+ H+
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHT 34
Score = 36.5 bits (85), Expect = 0.003
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 1340 HTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKC 1376
+GEK Y C C + F+ H+ H+ +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 36.1 bits (84), Expect = 0.003
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 786 TKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ S E+PY C C +F + LV+H K+H
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 35.4 bits (82), Expect = 0.007
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 399 SHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPC 436
GEK Y+C C F+ + L H+ H
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 34.2 bits (79), Expect = 0.020
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSC 1292
GE Y C C S + L QH ++HT + S
Sbjct: 7 GEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 33.8 bits (78), Expect = 0.029
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQC 740
GEK Y+C C F + L H+ H+ +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 33.5 bits (77), Expect = 0.034
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEKKYVC 2007
+ C C F D L H ++HT +
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 33.5 bits (77), Expect = 0.038
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 1997 RIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
+GEK Y C C +F L H H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 33.1 bits (76), Expect = 0.049
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTHT 1830
S +P+ C C F L+QH + HT
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHT 34
Score = 32.3 bits (74), Expect = 0.095
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMK 1968
SGEK Y+C C + F ++ L H K
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQK 31
Score = 31.9 bits (73), Expect = 0.11
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
S E+ + C+ C TF L +H+K H
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 31.5 bits (72), Expect = 0.16
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SGE+ Y+C+ C + F NRL +H +++H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMH 33
Score = 31.1 bits (71), Expect = 0.23
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 264 AVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ +GEK + C+ C+ F NRL +H +++H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQH-QKMH 33
Score = 30.8 bits (70), Expect = 0.28
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GEK + C EC ++ + + L +H +HT +
Sbjct: 7 GEK-PYSCAECKETFSDNNRLVQHQKMHTVKS 37
Score = 30.4 bits (69), Expect = 0.50
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRPYTC 656
Y C C F+ + L H + HT +
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 29.6 bits (67), Expect = 0.86
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1209 HRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE+ SC C ++F +RL +H ++ H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMH 33
Score = 29.2 bits (66), Expect = 0.98
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGERTMSC 1217
Y C++C +T++ L H +H + S
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 28.8 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 98 HSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
SGE +SC EC ++F+ L +H +K+HT
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH-QKMHT 34
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 45.8 bits (108), Expect = 4e-05
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 8/55 (14%)
Query: 55 LLTEEELREKSA-VEIDGEIKFQCPDCHTMMKNFAYLKKHVRDNHSGETFSCDEC 108
++T E + +++ + I CP+C V G+ C C
Sbjct: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKI------VERFSEGDVV-CALC 48
Score = 34.3 bits (78), Expect = 0.29
Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 13/57 (22%)
Query: 132 SSREENDMKKKTMVYVEGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCG 188
S + + + + CPEC IV ++ D VC +CG
Sbjct: 6 SIDKRAGRRGPNLN-----IVLTCPECK-------VYPPKIVERFSE-GDVVCALCG 49
Score = 33.9 bits (77), Expect = 0.33
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 9/46 (19%)
Query: 242 VKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRL 287
+ CPEC E G+ VC++C G + ++L
Sbjct: 20 IVLTCPECKVYPPKIVERFSE-----GD--VVCALC--GLVLSDKL 56
Score = 32.7 bits (74), Expect = 0.79
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 23/80 (28%)
Query: 1242 VTRVNQLKKKSEICIEGETKYKCPLC----PSITSRYDSLQQHMRLHTGEKPFSCQVCGK 1297
+TR + K+ CP C P I R+ G+ C +CG
Sbjct: 2 MTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSE---------GD--VVCALCGL 50
Query: 1298 SFAAR------EHLKRHFNN 1311
+ + E R F+N
Sbjct: 51 VLSDKLVDTRSEW--RTFSN 68
Score = 32.3 bits (73), Expect = 1.3
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 7/55 (12%)
Query: 606 MARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDRPYTCDVCG 660
M R + K++ + C C ++ R GD C +CG
Sbjct: 2 MTRESIDKRAGRRGPNLNIVLTCPECKV-----YPPKIVERFSEGD--VVCALCG 49
Score = 31.9 bits (72), Expect = 1.5
Identities = 6/35 (17%), Positives = 7/35 (20%), Gaps = 7/35 (20%)
Query: 379 RCHICGSTMSNAANFKDHLDSHRGEKKYTCETCGT 413
C C G+ C CG
Sbjct: 23 TCPECKVYPPKIVE-----RFSEGD--VVCALCGL 50
Score = 31.6 bits (71), Expect = 2.0
Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 13/67 (19%)
Query: 530 SDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEVHSGERKYTCSICSKCFFIK 589
+ + K + I CP C E G+ +C+ C +
Sbjct: 3 TRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVE-----RFSEGDV-----VCALCGLV- 51
Query: 590 NRLSEHY 596
LS+
Sbjct: 52 --LSDKL 56
Score = 31.6 bits (71), Expect = 2.2
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 12/61 (19%)
Query: 1739 ERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMVVHSNKNHICEICGKSFKKKDLLREHM 1798
+R ++ + C C P + S + +C +CG +L + +
Sbjct: 9 KRAGRRGPNLNIVLTCPECKV---YPPKIVER---FSEGDVVCALCGL------VLSDKL 56
Query: 1799 I 1799
+
Sbjct: 57 V 57
Score = 31.2 bits (70), Expect = 2.5
Identities = 8/44 (18%), Positives = 14/44 (31%), Gaps = 11/44 (25%)
Query: 1915 DGAIRFKCPDCPTILQTFRGLKAHL--DIHSGEKDYACHICNKV 1956
+ I CP+C + + G+ C +C V
Sbjct: 17 NLNIVLTCPEC-------KVYPPKIVERFSEGD--VVCALCGLV 51
Score = 30.8 bits (69), Expect = 3.7
Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 12/55 (21%)
Query: 1320 CNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSF 1374
C C K+ R G+ VC +CG + T SE R+F
Sbjct: 24 CPECK-----VYPPKIVERFSEGD--VVCALCGLVLSD---KLVD--TRSEWRTF 66
Score = 30.4 bits (68), Expect = 4.8
Identities = 7/55 (12%), Positives = 15/55 (27%), Gaps = 10/55 (18%)
Query: 748 MSPKTLKEHEQTHRS-GDIKHICDTCGSEFNTRKNMLRHTKVHSTERP-YICEYC 800
M+ +++ + +I C C + V +C C
Sbjct: 2 MTRESIDKRAGRRGPNLNIVLTCPECKVY---PPKI-----VERFSEGDVVCALC 48
Score = 30.4 bits (68), Expect = 4.9
Identities = 6/34 (17%), Positives = 9/34 (26%), Gaps = 7/34 (20%)
Query: 684 CNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGT 717
C C +G+ C +CG
Sbjct: 24 CPECK---VYPPKI--VERFSEGD--VVCALCGL 50
Score = 30.0 bits (67), Expect = 6.0
Identities = 13/56 (23%), Positives = 15/56 (26%), Gaps = 8/56 (14%)
Query: 2070 MSTPAPSSKSVCIEHSNLIPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLC 2125
M T K NL C E C + + D VC LC
Sbjct: 1 MMTRESIDKRAGRRGPNLNIV----LTCPE----CKVYPPKIVERFSEGDVVCALC 48
Score = 30.0 bits (67), Expect = 6.0
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 7/33 (21%)
Query: 1516 CDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCG 1548
C C K ++ G+ VC CG
Sbjct: 24 CPECKV--YPPKIVERFSE---GD--VVCALCG 49
Score = 30.0 bits (67), Expect = 6.0
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 7/33 (21%)
Query: 1640 CDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCG 1672
C C K ++ G+ VC CG
Sbjct: 24 CPECKV--YPPKIVERFSE---GD--VVCALCG 49
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB:
2cse_V
Length = 1275
Score = 44.5 bits (104), Expect = 5e-04
Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 1/119 (0%)
Query: 1459 PNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNMIDHQ-RSVHELLKPYECD 1517
K + + ++ S++ + I +R +D++ S + + +
Sbjct: 97 EAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAE 156
Query: 1518 TCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSAS 1576
+S + + Y C C A L H SH N S+
Sbjct: 157 ATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSE 215
Score = 43.3 bits (101), Expect = 0.001
Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 1/130 (0%)
Query: 1565 SETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTNRKNM 1624
+ + + H + +++ A K + +S +++ N+
Sbjct: 81 PDKKGNTRGDLVNEHSEAKDEADEATQKQ-AKDTDKSKAQVTYSDTGINNANELSRSGNV 139
Query: 1625 IDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYH 1684
+ S + + + +S + + Y C C A L H
Sbjct: 140 DNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH 199
Query: 1685 KFSHSETRNQ 1694
SH N
Sbjct: 200 VASHGLHGNM 209
Score = 42.1 bits (98), Expect = 0.002
Identities = 10/54 (18%), Positives = 14/54 (25%)
Query: 711 TCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGD 764
E + + S +QC C SP L H +H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207
Score = 40.2 bits (93), Expect = 0.010
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 768 ICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKGVNTNTLPS 827
I + + + + S+ Y C C+ L H H TL S
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTS 213
Query: 828 NDIIKHMR 835
++I +H+
Sbjct: 214 SEIQRHIT 221
Score = 39.5 bits (91), Expect = 0.016
Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 11/100 (11%)
Query: 454 KVHTSGDVRH------ICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLL 507
V G I + + + T ++ + C +C+A L + L
Sbjct: 138 NVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLD 197
Query: 508 RHYTTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRI 547
H +HG + +SS R + + + I
Sbjct: 198 AHVASHGLHGNM-----TLTSSEIQRHITEFISSWQNHPI 232
Score = 39.1 bits (90), Expect = 0.021
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 22/96 (22%)
Query: 1245 VNQLKKKSEICIEGETKYKCPLCPSITSRYDSLQQHMRLHTGEKPFSCQVCGKSFAAREH 1304
N+L + + EG + + P+ I ++ G P
Sbjct: 130 ANELSRSGNVDNEGGSN-QKPMSTRIAEATSAIVSKHPARVGLPP-------------TA 175
Query: 1305 LKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNH 1340
H GYQC+VC VL +L H+ +H
Sbjct: 176 SSGH--------GYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.9 bits (87), Expect = 0.043
Identities = 7/49 (14%), Positives = 11/49 (22%)
Query: 380 CHICGSTMSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
+ +S + Y C C L H +H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.080
Identities = 12/70 (17%), Positives = 17/70 (24%), Gaps = 2/70 (2%)
Query: 1780 ICEICGKSFKKKDLLREHMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPKAT--NS 1837
I E K S+ + C C+A L H +H S
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTS 213
Query: 1838 FSSSKCEESF 1847
+ F
Sbjct: 214 SEIQRHITEF 223
Score = 37.1 bits (85), Expect = 0.092
Identities = 6/32 (18%), Positives = 9/32 (28%)
Query: 1772 VVHSNKNHICEICGKSFKKKDLLREHMIVHST 1803
S + C +C L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASHGL 205
Score = 37.1 bits (85), Expect = 0.094
Identities = 14/102 (13%), Positives = 29/102 (28%), Gaps = 7/102 (6%)
Query: 26 CEKSSESTIRAPSMLMKHWRRVHKSAGVDLLTEEELREKSAVEIDGEIKFQ------CPD 79
+++ E+T + K + + + EL V+ +G +
Sbjct: 99 KDEADEATQKQAKDTDKS-KAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEA 157
Query: 80 CHTMMKNFAYLKKHVRDNHSGETFSCDECSKSFTTKKCLREH 121
++ SG + C CS + L H
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH 199
Score = 36.8 bits (84), Expect = 0.10
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 445 SPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTH 485
S + L S + C C + + +L H+ +H
Sbjct: 163 SKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.4 bits (83), Expect = 0.15
Identities = 8/53 (15%), Positives = 11/53 (20%)
Query: 683 QCNICGRVMSDSTNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKE 735
++S Y C +C L H SH
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 36.4 bits (83), Expect = 0.16
Identities = 8/65 (12%), Positives = 12/65 (18%), Gaps = 1/65 (1%)
Query: 232 EDCQIMQGEKVKFKCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHY 291
+ Q + + C VC F L+ H
Sbjct: 141 NEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH- 199
Query: 292 KRVHH 296
H
Sbjct: 200 VASHG 204
Score = 36.0 bits (82), Expect = 0.17
Identities = 5/55 (9%), Positives = 12/55 (21%)
Query: 1319 QCNVCGRVLTDSSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERS 1373
+++ + Y C +C H +H +
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208
Score = 35.2 bits (80), Expect = 0.29
Identities = 9/46 (19%), Positives = 13/46 (28%)
Query: 1954 NKVFVRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRIH 1999
V + +QC VC F +L H+ H
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 34.8 bits (79), Expect = 0.39
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 8/87 (9%)
Query: 593 SEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRLHVRTHTGDR 652
+ +V + N++ +S + +G + + + I ++ G
Sbjct: 114 DKSKAQVTYSDTGINNANELSRSGNVDNEGGSN-QKPMSTRIAEATSAIVSKHPARVGLP 172
Query: 653 P-------YTCDVCGKSFVAKKHLNRH 672
P Y C VC + L+ H
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAH 199
Score = 34.8 bits (79), Expect = 0.41
Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 10/116 (8%)
Query: 511 TTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYKCPLCDRIYTSFSETKRHFEV 570
+ A + ++ + L +S EG + P+ RI + S
Sbjct: 110 AKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQ--KPMSTRIAEATSAIVSKHPA 167
Query: 571 HSG-------ERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEIS 619
G Y C +CS F L H H + +M T+ +
Sbjct: 168 RVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH-VASHGLHGNMTLTSSEIQRHITE 222
Score = 34.8 bits (79), Expect = 0.47
Identities = 17/133 (12%), Positives = 31/133 (23%), Gaps = 13/133 (9%)
Query: 1561 KFSHSETRNQKHVSASSCHQKVPNKSVTAKFKALFTERSESSESSKKIYECDICKKQVTN 1620
K E ++ +V RS + ++ + + +
Sbjct: 99 KDEADEATQKQAKDTDKSKAQVTYSDTGINNANE-LSRSGNVDNEGGSNQKPMSTRIAEA 157
Query: 1621 RKNMIDHQR------SVHELLKPYECDTCGHGLSSKKSLDDHYRIH-----TGEKKYVCQ 1669
++ Y+C C L S LD H H Q
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSEIQ 217
Query: 1670 QCGASFTQ-WASL 1681
+ F W +
Sbjct: 218 RHITEFISSWQNH 230
Score = 34.4 bits (78), Expect = 0.55
Identities = 14/88 (15%), Positives = 25/88 (28%), Gaps = 7/88 (7%)
Query: 1890 KKHHTMQLSISSVSKHIKSKTQIFVDGAIR------FKCPDCPTILQTFRGLKAHLDIHS 1943
K T + + + + + +G I+ S
Sbjct: 117 KAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTAS 176
Query: 1944 GEKDYACHICNKVFVRHSTLENHMKAVH 1971
Y CH+C+ V L+ H+ A H
Sbjct: 177 SGHGYQCHVCSAVLFSPLDLDAHV-ASH 203
Score = 34.1 bits (77), Expect = 0.69
Identities = 10/64 (15%), Positives = 20/64 (31%)
Query: 1348 CEICGKGFTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKHVCNT 1407
E ++ + T S ++C C+ P L H +H L + ++
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSS 214
Query: 1408 CGNE 1411
Sbjct: 215 EIQR 218
Score = 34.1 bits (77), Expect = 0.72
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 619 SVDGVTKYKCHICDSIFTRYDSLRLHVRTH 648
+ Y+CH+C ++ L HV +H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 1.0
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 1402 KHVCNTCGNEYNTRKNLLSHMKIHSTG 1428
+ C+ C + +L +H+ H
Sbjct: 180 GYQCHVCSAVLFSPLDLDAHVASHGLH 206
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 38.3 bits (89), Expect = 6e-04
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 1279 QHMRLHTGEKPFSCQVCGKSFAAREHLKRH 1308
GE PF C C + F R +L +H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQH 31
Score = 37.5 bits (87), Expect = 0.001
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 784 RHTKVHSTERPYICEYCNVSFKEKKSLVRHYKIHKG 819
+ E P+ C C+ F ++ LV+H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 37.1 bits (86), Expect = 0.002
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRH 672
+ G+ P+ C C + F + +L +H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQH 31
Score = 35.6 bits (82), Expect = 0.007
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 340 HMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWHLGK 376
S GE P+ C C + F + L H + H K
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTHARK 38
Score = 34.8 bits (80), Expect = 0.011
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
P++C C + + L H R H +
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 34.8 bits (80), Expect = 0.011
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
P++C C + + L H R H +
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 33.7 bits (77), Expect = 0.029
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 1797 HMIVHSTLRPFLCEFCNAGFKCRKHLLQHYRTHTKPKATNS 1837
+ PF C C+ F R +L+QH RTH + +S
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS 43
Score = 33.7 bits (77), Expect = 0.030
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1532 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1565
GE + C +C FTQ L H+ +H+
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
Score = 33.7 bits (77), Expect = 0.030
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1656 HYRIHTGEKKYVCQQCGASFTQWASLFYHKFSHS 1689
GE + C +C FTQ L H+ +H+
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
Score = 33.7 bits (77), Expect = 0.030
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 1336 HMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERS 1373
+ GE + C C + FTQ H+ TH+ +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 32.9 bits (75), Expect = 0.064
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 396 HLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH 428
S GE + C C F ++ L H TH
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 32.1 bits (73), Expect = 0.11
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 1977 FQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
F+C CDR F L H R H +
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 32.1 bits (73), Expect = 0.12
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVH 600
+GE + CS C + F +N L +H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTH 35
Score = 32.1 bits (73), Expect = 0.12
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1364 HKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ + E FKCS C F L +H++TH
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 31.8 bits (72), Expect = 0.15
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDRP 653
+KC CD +FT+ + L H RTH
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 31.8 bits (72), Expect = 0.17
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSH 1238
GE C+ CD+ F Q + L +H +R+H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTH 35
Score = 31.8 bits (72), Expect = 0.18
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1258 GETKYKCPLCPSITSRYDSLQQHMRLHTGEKP 1289
GE +KC C + ++ + L QH R H +
Sbjct: 9 GENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 31.4 bits (71), Expect = 0.20
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 261 KHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+ GE F CS C R F +N L +H +R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQH-ERTH 35
Score = 31.0 bits (70), Expect = 0.27
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 700 HLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKER 736
+ GE + C C F ++ L H+ +H+++
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 31.0 bits (70), Expect = 0.30
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 1187 YKCSDCDKTYTRFYELKCHLMVHRGER 1213
+KCS CD+ +T+ L H H +
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 31.0 bits (70), Expect = 0.33
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 1937 AHLDIHSGEKDYACHICNKVFVRHSTLENHMK 1968
+ +GE + C C++VF + + L H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 30.6 bits (69), Expect = 0.41
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 239 GEKVKFKCPECPRSYGNFSELKKHLAVHTGEK 270
GE FKC +C R + + L +H H +
Sbjct: 9 GEN-PFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 30.2 bits (68), Expect = 0.49
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 728 HKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTH 760
S + E F+CS C++ + L +HE+TH
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 30.2 bits (68), Expect = 0.56
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 97 NHSGET-FSCDECSKSFTTKKCLREHYKKLHT 127
+ +GE F C +C + FT + L +H ++ H
Sbjct: 6 SGAGENPFKCSKCDRVFTQRNYLVQH-ERTHA 36
Score = 28.7 bits (64), Expect = 1.9
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1474 RSESSESSKKIYECDICKKQVTNRKNMIDHQR 1505
S SS + + ++C C + T R ++ H+R
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 28.7 bits (64), Expect = 1.9
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1598 RSESSESSKKIYECDICKKQVTNRKNMIDHQR 1629
S SS + + ++C C + T R ++ H+R
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 28.7 bits (64), Expect = 2.2
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 1995 HMRIHTGEKKYVCETCGASFVHWGSLNIHNYSH 2027
GE + C C F L H +H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 26.7 bits (59), Expect = 8.4
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 758 QTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERP 794
+ +G+ C C F R +++H + H+ +
Sbjct: 4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 26.7 bits (59), Expect = 9.5
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 549 YKCPLCDRIYTSFSETKRHFEVHSGER 575
+KC CDR++T + +H H+ +
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKS 39
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 37.6 bits (86), Expect = 0.001
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 789 HSTERPYICEYCNVSFKEKKSLVRHYKIHKGVNTNTLPSN 828
S E+PY C C + FK K + H + H G + PS+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS 44
Score = 33.7 bits (76), Expect = 0.033
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHF 1309
+GEKP+SC VCG F ++ + H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHV 30
Score = 32.2 bits (72), Expect = 0.10
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 648 HTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAG 679
+G++PY+C VCG F K ++ H SH G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDG 35
Score = 31.4 bits (70), Expect = 0.21
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 571 HSGERKYTCSICSKCFFIKNRLSEHYR 597
SGE+ Y+C +C F K+R+S H R
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVR 31
Score = 29.9 bits (66), Expect = 0.77
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 344 HTGEKPYTCEACGKSFPLKRRLNAHY 369
+GEKPY+C CG F K R++ H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHV 30
Score = 28.7 bits (63), Expect = 2.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 266 HTGEKHFVCSVCQRGFFMKNRLNEHYK 292
+GEK + C VC F K+R++ H +
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVR 31
Score = 28.0 bits (61), Expect = 3.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1942 HSGEKDYACHICNKVFVRHSTLENHMKA 1969
SGEK Y+C +C F R + H+++
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRS 32
Score = 28.0 bits (61), Expect = 3.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTH 1829
S +P+ C C FK + + H R+H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 28.0 bits (61), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTG 650
Y C +C F R D + HVR+H G
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.2 bits (59), Expect = 7.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTG 1538
KPY C CG K + H R H G
Sbjct: 9 KPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.2 bits (59), Expect = 7.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTG 1662
KPY C CG K + H R H G
Sbjct: 9 KPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 26.8 bits (58), Expect = 9.6
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1368 HSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
S E+ + C C + F+ ++ H ++H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 36.8 bits (86), Expect = 0.002
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEK 348
R + C C F R + LQ H +HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 33.0 bits (76), Expect = 0.042
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1318 YQCNV--CGRVLTDSSNLKVHMRNHTGEK 1344
+ C CG+ T S L+ H R HTGEK
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.4 bits (72), Expect = 0.13
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 626 YKCHI--CDSIFTRYDSLRLHVRTHTGDR 652
+ C C FTR D L+ H RTHTG++
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.4 bits (72), Expect = 0.16
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 1975 RDFQCKV--CDRAFFDVYNLKLHMRIHTGEK 2003
R F C C + F L+ H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.3 bits (69), Expect = 0.38
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1262 YKC--PLCPSITSRYDSLQQHMRLHTGEK 1288
+ C C +R D LQ+H R HTGEK
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.9 bits (68), Expect = 0.46
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 1512 KPYECD--TCGHGLSSKKSLDDHYRIHTGEK 1540
+P+ C CG + L H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.9 bits (68), Expect = 0.46
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 1636 KPYECD--TCGHGLSSKKSLDDHYRIHTGEK 1664
+P+ C CG + L H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 28.3 bits (64), Expect = 1.7
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 1288 KPFSCQV--CGKSFAAREHLKRHF 1309
+PF C CGK F + L+RH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHK 24
Score = 28.0 bits (63), Expect = 2.4
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 1805 RPFLC--EFCNAGFKCRKHLLQHYRTHTKPK 1833
RPF+C +C F L +H RTHT K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.8 bits (60), Expect = 6.2
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 793 RPYIC--EYCNVSFKEKKSLVRHYKIHKGV 820
RP++C YC F L RH + H G
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 26.8 bits (60), Expect = 6.9
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 244 FKC--PECPRSYGNFSELKKHLAVHTGEK 270
F C C + + EL++H HTGEK
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.4 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 652 RPYTCDV--CGKSFVAKKHLNRHY 673
RP+ C CGK F L RH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHK 24
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 36.1 bits (84), Expect = 0.003
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 1805 RPFLCEFCNAGFKCRKHLLQHYRTHTKPK 1833
R F+CE C F ++HL +HYR+HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.0 bits (81), Expect = 0.008
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 1288 KPFSCQVCGKSFAAREHLKRHF 1309
+ F C+VC ++FA +EHLKRH+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY 22
Score = 33.8 bits (78), Expect = 0.019
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 1975 RDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
R F C+VC RAF +LK H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 32.7 bits (75), Expect = 0.044
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 625 KYKCHICDSIFTRYDSLRLHVRTHTGDR 652
+ C +C F R + L+ H R+HT ++
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.0 bits (68), Expect = 0.42
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1261 KYKCPLCPSITSRYDSLQQHMRLHTGEK 1288
+ C +C +R + L++H R HT EK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.6 bits (67), Expect = 0.58
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
+ + C+ C + ++ L HYR HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.6 bits (67), Expect = 0.58
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
+ + C+ C + ++ L HYR HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.6 bits (67), Expect = 0.64
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 652 RPYTCDVCGKSFVAKKHLNRHY 673
R + C+VC ++F ++HL RHY
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY 22
Score = 28.4 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 793 RPYICEYCNVSFKEKKSLVRHYKIHKG 819
R ++CE C +F ++ L RHY+ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEK 348
R + C C +F R L+ H SHT EK
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 28.1 bits (63), Expect = 2.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 243 KFKCPECPRSYGNFSELKKHLAVHTGEK 270
F C C R++ LK+H HT EK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 96
Score = 37.2 bits (85), Expect = 0.008
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 1256 IEGETKYKCPLCPSITSRY-DSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIH 1313
I + CP C ++ + + L++HM + ++ F+C CGK + +K H H
Sbjct: 29 IVDKGSVSCPTCQAVGRKTIEGLKKHME-NCKQEMFTCHHCGKQLRSLAGMKYHVMANH 86
Score = 35.2 bits (80), Expect = 0.037
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 61 LREKSAVEIDGEIKFQCPDCHTMM-KNFAYLKKHVRDNHSGETFSCDECSKSFTTKKCLR 119
L E+ +EI + CP C + K LKKH+ N E F+C C K + ++
Sbjct: 21 LEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME-NCKQEMFTCHHCGKQLRSLAGMK 79
Query: 120 EHYKKLHT 127
H H
Sbjct: 80 YHVMANHN 87
Score = 34.8 bits (79), Expect = 0.040
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 1085 KFQCPHCN-INHDDLVSLKQHIVEAHVPSISCSHCEMKFKNLKDFKEHMTSVHLNK 1139
CP C + + LK+H+ +C HC + ++L K H+ + H +
Sbjct: 34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSL 89
Score = 32.9 bits (74), Expect = 0.21
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 1919 RFKCPDCPTIL-QTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVH 1971
CP C + +T GLK H++ E + CH C K + ++ H+ A H
Sbjct: 34 SVSCPTCQAVGRKTIEGLKKHMENCKQEM-FTCHHCGKQLRSLAGMKYHVMANH 86
Score = 31.4 bits (70), Expect = 0.77
Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 1165 APNRTVESDREKYKLVEGDQVRYKCSDCDK-TYTRFYELKCHLMVHRGERTMSCTMCDKS 1223
P S E++ L D+ C C LK H+ + +C C K
Sbjct: 13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQ 71
Query: 1224 FYQVSRLTEHYKRSH 1238
++ + H +H
Sbjct: 72 LRSLAGMKYHVMANH 86
Score = 31.0 bits (69), Expect = 1.2
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 545 DRIKYKCPLCDRI-YTSFSETKRHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMR 603
D+ CP C + + K+H E + +TC C K + H H
Sbjct: 31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL 89
Query: 604 VSMART 609
S +
Sbjct: 90 PSGPSS 95
Score = 29.8 bits (66), Expect = 2.9
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 625 KYKCHICDSIFTRY-DSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHA 678
C C ++ + + L+ H+ +TC CGK + + H +H
Sbjct: 34 SVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87
Score = 28.7 bits (63), Expect = 6.1
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 240 EKVKFKCPECPR-SYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+K CP C LKKH+ ++ F C C + + H H
Sbjct: 31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANH 86
Score = 28.3 bits (62), Expect = 9.0
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 1312 IHMKVGYQCNVCGRVLTDS-SNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYH 1364
I K C C V + LK HM N ++ + C CGK A YH
Sbjct: 29 IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH 81
Score = 28.3 bits (62), Expect = 9.6
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 1751 RCVCSYCGN-SYANPGNLRTHMVVHSNKNHICEICGKSFKKKDLLREH-MIVHSTLRPF 1807
C C L+ HM + C CGK + ++ H M H++L
Sbjct: 34 SVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG 92
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 35.0 bits (81), Expect = 0.008
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEK 348
+++ C GC + + + L+ H+ HTGE+
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 33.9 bits (78), Expect = 0.022
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 1323 CGRVLTDSSNLKVHMRNHTGEK 1344
CG+V +S+L+ H+R HTGE+
Sbjct: 16 CGKVYGKTSHLRAHLRWHTGER 37
Score = 30.0 bits (68), Expect = 0.50
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 625 KYKCHI--CDSIFTRYDSLRLHVRTHTGDR 652
++ CHI C ++ + LR H+R HTG+R
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 29.6 bits (67), Expect = 0.64
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 239 GEKVKFKC--PECPRSYGNFSELKKHLAVHTGEK 270
G+K + C C + YG S L+ HL HTGE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 29.6 bits (67), Expect = 0.64
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 1972 EKIRDFQCKV--CDRAFFDVYNLKLHMRIHTGEK 2003
K + C + C + + +L+ H+R HTGE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.9 bits (60), Expect = 6.2
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 1186 RYKCS--DCDKTYTRFYELKCHLMVHRGER 1213
++ C C K Y + L+ HL H GER
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.5 bits (59), Expect = 9.3
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 1777 KNHICEI--CGKSFKKKDLLREHMIVHS 1802
K HIC I CGK + K LR H+ H+
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHT 34
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet, structural
genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 102
Score = 36.3 bits (83), Expect = 0.015
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Query: 1274 YDSLQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKV----GYQCNVCGRVLTD 1329
+ + + E + C+ C H ++ H V Y C C +
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 1330 SSNLKVH-MRNHTGEKKYVCEI 1350
L H ++ H GE+ + +
Sbjct: 63 YDALSEHNLKYHPGEENFKLTM 84
Score = 35.1 bits (80), Expect = 0.043
Identities = 17/76 (22%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 304 HDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLS-HTG---EKPYTCEACGKSF 359
H + N Y+C + C N H+ S H Y C C
Sbjct: 3 HHHHHHNQQNKKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 360 PLKRRLNAHYNKWHLG 375
L+ H K+H G
Sbjct: 61 KRYDALSEHNLKYHPG 76
Score = 34.0 bits (77), Expect = 0.097
Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 16/91 (17%)
Query: 1205 HLMVHRGERTMSCTMCDKSFYQVSRLTEHYKRSHRMKVTRVNQLKKKSEICIEGETKYKC 1264
+ + E C C ++ T H H + + Y C
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEH---------------PNVVLNSSYVC 53
Query: 1265 PLCPSITSRYDSLQQH-MRLHTGEKPFSCQV 1294
C +T RYD+L +H ++ H GE+ F +
Sbjct: 54 VECNFLTKRYDALSEHNLKYHPGEENFKLTM 84
Score = 34.0 bits (77), Expect = 0.10
Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 4/74 (5%)
Query: 694 STNFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSH----SKERMFQCSFCEKKYMS 749
+ + N K E Y C+ C + H S + C C
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 750 PKTLKEHEQTHRSG 763
L EH + G
Sbjct: 63 YDALSEHNLKYHPG 76
Score = 33.2 bits (75), Expect = 0.19
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 1473 ERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVH---ELLKPYECDTCGHGLSSKKSL 1529
++ ++ + YEC C Q + H S H L Y C C +L
Sbjct: 7 HHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDAL 66
Query: 1530 DDH-YRIHTGEKKYVCQ 1545
+H + H GE+ +
Sbjct: 67 SEHNLKYHPGEENFKLT 83
Score = 33.2 bits (75), Expect = 0.19
Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 1597 ERSESSESSKKIYECDICKKQVTNRKNMIDHQRSVH---ELLKPYECDTCGHGLSSKKSL 1653
++ ++ + YEC C Q + H S H L Y C C +L
Sbjct: 7 HHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDAL 66
Query: 1654 DDH-YRIHTGEKKYVCQ 1669
+H + H GE+ +
Sbjct: 67 SEHNLKYHPGEENFKLT 83
Score = 33.2 bits (75), Expect = 0.20
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 1735 AHLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTHMV-----VHSNKNHICEICGKSFK 1789
AH H +++ ++ C YC + H+ V N +++C C K
Sbjct: 2 AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61
Query: 1790 KKDLLREH 1797
+ D L EH
Sbjct: 62 RYDALSEH 69
Score = 33.2 bits (75), Expect = 0.20
Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 74 KFQCPDCHTMMKNFAYLKKHVRDNHSG----ETFSCDECSKSFTTKKCLREHYKKLHT 127
++C C + HV H ++ C EC+ L EH K H
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP 75
Score = 32.4 bits (73), Expect = 0.31
Identities = 13/82 (15%), Positives = 23/82 (28%), Gaps = 5/82 (6%)
Query: 638 YDSLRLHVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGF----GYQCNICGRVMSD 693
+ + + + Y C C H + H Y C C +
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 694 STNFKDH-LDNHKGEKKYTCEI 714
+H L H GE+ + +
Sbjct: 63 YDALSEHNLKYHPGEENFKLTM 84
Score = 32.4 bits (73), Expect = 0.32
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 152 KYKCPECGFMVKRFQGLREHIVSVHAQVK---DHVCIVCGAAFGLARRLKTHYIRRHTVN 208
Y+C C F H+ S H V +VC+ C L H ++ H
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE 77
Query: 209 ---ILTQANHDNEDKLD 222
LT +N+ +
Sbjct: 78 ENFKLTMVKRNNQTIFE 94
Score = 32.1 bits (72), Expect = 0.49
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 4/87 (4%)
Query: 392 NFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTH----IKDRTYPCTYCERKYQSPK 447
+ + + + E Y C+ C + H + + + +Y C C +
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 448 TLKEHLKVHTSGDVRHICQTCGSEFHT 474
L EH + G+ T
Sbjct: 65 ALSEHNLKYHPGEENFKLTMVKRNNQT 91
Score = 32.1 bits (72), Expect = 0.50
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Query: 1938 HLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIR---DFQCKVCDRAFFDVYNLKL 1994
+ E Y C C + H+ + H + + C C+ L
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSE 68
Query: 1995 H-MRIHTGEKKYVC 2007
H ++ H GE+ +
Sbjct: 69 HNLKYHPGEENFKL 82
Score = 31.7 bits (71), Expect = 0.59
Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 18/97 (18%)
Query: 90 LKKHVRDNHSGETFSCDECSKSFTTKKCLREHYKKLHTIRIRSSREENDMKKKTMVYVEG 149
+ ++ + C C+ H H + +S
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNS---------------- 49
Query: 150 VVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIV 186
Y C EC F+ KR+ L EH + H ++ +
Sbjct: 50 --SYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM 84
Score = 31.7 bits (71), Expect = 0.60
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Query: 1958 VRHSTLENHMKAVHEKIRDFQCKVCDRAFFDVYNLKLHMRI-HTGEKK---YVCETCGAS 2013
+ H ++ + + ++CK C D+ H+ H YVC C
Sbjct: 1 MAHHHHHHNQQN-KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFL 59
Query: 2014 FVHWGSLNIHNYSH 2027
+ +L+ HN +
Sbjct: 60 TKRYDALSEHNLKY 73
Score = 31.3 bits (70), Expect = 0.91
Identities = 14/63 (22%), Positives = 19/63 (30%), Gaps = 5/63 (7%)
Query: 1085 KFQCPHCNINHDDLVSLKQHIVEAHV-----PSISCSHCEMKFKNLKDFKEHMTSVHLNK 1139
++C +C DL H+ H S C C K EH H +
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE 77
Query: 1140 RNL 1142
N
Sbjct: 78 ENF 80
Score = 30.9 bits (69), Expect = 1.1
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 1301 AREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRN-HTGEKK---YVCEICGKGFT 1356
A H + N ++ GY+C C D + H+ + H YVC C
Sbjct: 2 AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61
Query: 1357 QWASHYYH-KFTHSEERSFKCS 1377
++ + H H E +FK +
Sbjct: 62 RYDALSEHNLKYHPGEENFKLT 83
Score = 30.9 bits (69), Expect = 1.2
Identities = 12/71 (16%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTH----SEERSFKCSYCAMTFRC 1385
+ + +N E Y C+ C +H + S+ C C +
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 1386 PRTLTEHKKTH 1396
L+EH +
Sbjct: 63 YDALSEHNLKY 73
Score = 30.9 bits (69), Expect = 1.3
Identities = 10/75 (13%), Positives = 22/75 (29%), Gaps = 3/75 (4%)
Query: 419 SSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLK---VHTSGDVRHICQTCGSEFHTR 475
+H++ + Y C YC + H+ + + ++C C
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 476 KNLLTHIRTHNTDRT 490
L H ++
Sbjct: 64 DALSEHNLKYHPGEE 78
Score = 30.9 bits (69), Expect = 1.4
Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 5/79 (6%)
Query: 335 NALQEHMLSHTGEKPYTCEACGKSFPLKRRLNAHYNKWH----LGKGYRCHICGSTMSNA 390
+ + + E Y C+ C P H + H L Y C C
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 391 ANFKDH-LDSHRGEKKYTC 408
+H L H GE+ +
Sbjct: 64 DALSEHNLKYHPGEENFKL 82
Score = 30.5 bits (68), Expect = 1.8
Identities = 14/71 (19%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Query: 1991 NLKLHMRIHTGEKKYVCETCGASFVHWGSLNIHNYS-----HINAQFVCSFCGNTYKNPK 2045
+ + + E Y C+ C H S +N+ +VC C K
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 2046 SLDSHIRNSHT 2056
+L H H
Sbjct: 65 ALSEHNLKYHP 75
Score = 29.7 bits (66), Expect = 2.8
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 1919 RFKCPDCPTILQTFRGLKAHLDI-HSG---EKDYACHICNKVFVRHSTLENHMKAVHEKI 1974
++C C H+D H Y C CN + R+ L H H
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE 77
Query: 1975 RDFQCKVCDR 1984
+F+ + R
Sbjct: 78 ENFKLTMVKR 87
Score = 29.0 bits (64), Expect = 5.6
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 1360 SHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEH---KKTHVLSDVKHVCNTCGNEYNTRK 1416
H++++ E ++C YC T H + +V+ + +VC C
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 1417 NLLSHMKIHSTG 1428
L H + G
Sbjct: 65 ALSEHNLKYHPG 76
Score = 29.0 bits (64), Expect = 6.5
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 664 VAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLD----NHKGEKKYTCEICGTGF 719
+A H + + GY+C C D F H+D N Y C C
Sbjct: 1 MAHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 720 MYKSSLH-HHKFSHSKERMFQCS 741
+L H+ H E F+ +
Sbjct: 61 KRYDALSEHNLKYHPGEENFKLT 83
Score = 28.6 bits (63), Expect = 8.4
Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 18/94 (19%)
Query: 566 RHFEVHSGERKYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTK 625
+ + E Y C C+ N + H H +V + +
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEH---------PNVVLN--------SS 50
Query: 626 YKCHICDSIFTRYDSLRLHV-RTHTGDRPYTCDV 658
Y C C+ + RYD+L H + H G+ + +
Sbjct: 51 YVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM 84
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 36.1 bits (82), Expect = 0.016
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 1255 CIEGETKYKCPLCPSITSR-YDSLQQHMRL-HTGEKPFSCQVCGKSFAAREHLKRHFNNI 1312
I + CP C +T + L++HM + + CQ C K F ++ L H
Sbjct: 18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAE 77
Query: 1313 H 1313
H
Sbjct: 78 H 78
Score = 34.9 bits (79), Expect = 0.039
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 1919 RFKCPDCPTIL-QTFRGLKAHLDI-HSGEKDYACHICNKVFVRHSTLENHMKAVHE 1972
CP C + +T GLK H+++ + C C K F + L H A H
Sbjct: 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79
Score = 34.5 bits (78), Expect = 0.066
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 68 EIDGEIKFQCPDCHTMM-KNFAYLKKHVRDNHSG-ETFSCDECSKSFTTKKCLREHYKKL 125
I + CP C+ + K LKKH+ + C C K F +K L H
Sbjct: 18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAE 77
Query: 126 HTIR 129
H+ +
Sbjct: 78 HSAK 81
Score = 33.4 bits (75), Expect = 0.14
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 1085 KFQCPHCN-INHDDLVSLKQHIVEAH--VPSISCSHCEMKFKNLKDFKEHMTSVHLNK 1139
+ CP CN + LV LK+H+ ++ C HC +FK+ H + H K
Sbjct: 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK 81
Score = 32.2 bits (72), Expect = 0.41
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 545 DRIKYKCPLCDRI-YTSFSETKRHFEV-HSGERKYTCSICSKCFFIKNRLSEHYRRVHKM 602
+R + CP C+ + + K+H EV + C C K F K L+ H H
Sbjct: 21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80
Query: 603 RVSMARTNDVKKS 615
+ S A ++ +S
Sbjct: 81 KPSDAEASEGGES 93
Score = 30.7 bits (68), Expect = 1.2
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 1724 CPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSYCGNSYANPGNLRTH-MVVHSNK 1777
CP + + K L++HM+ +Q C +C + + L H M HS K
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK 81
Score = 30.7 bits (68), Expect = 1.3
Identities = 16/57 (28%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 1310 NNIHMKVGYQCNVCGRVLTDS-SNLKVHMRN-HTGEKKYVCEICGKGFTQWASHYYH 1364
IH + C C V + LK HM + C+ C K F A YH
Sbjct: 17 RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYH 73
Score = 29.5 bits (65), Expect = 3.9
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
Query: 231 KEDCQIMQGEKVKFKCPECPR-SYGNFSELKKHLAV-HTGEKHFVCSVCQRGFFMKNRLN 288
+E Q E+ + CP C + LKKH+ V + C C++ F K LN
Sbjct: 12 EEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLN 71
Query: 289 EHYKRVH 295
H H
Sbjct: 72 YHTMAEH 78
Score = 29.1 bits (64), Expect = 4.7
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 625 KYKCHICDSIFTR-YDSLRLHVRT-HTGDRPYTCDVCGKSFVAKKHLNRHYNCSHA 678
+ C C+ + + L+ H+ C C K F +K LN H H+
Sbjct: 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79
Score = 29.1 bits (64), Expect = 5.1
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 1/56 (1%)
Query: 1480 SSKKIYECDICKKQVTNR-KNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYR 1534
+ C C + H +L +C C SK L+ H
Sbjct: 20 HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 29.1 bits (64), Expect = 5.1
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 1/56 (1%)
Query: 1604 SSKKIYECDICKKQVTNR-KNMIDHQRSVHELLKPYECDTCGHGLSSKKSLDDHYR 1658
+ C C + H +L +C C SK L+ H
Sbjct: 20 HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 28.8 bits (63), Expect = 5.9
Identities = 9/54 (16%), Positives = 15/54 (27%), Gaps = 2/54 (3%)
Query: 404 KKYTCETCGTGFAYKSS--LYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKV 455
+ C TC H C +C ++++S L H
Sbjct: 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMA 76
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 34.1 bits (78), Expect = 0.021
Identities = 8/31 (25%), Positives = 19/31 (61%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHTGEK 348
+ ++C PGC +F+R ++ H+ +H ++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 32.1 bits (73), Expect = 0.11
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 625 KYKCHI--CDSIFTRYDSLRLHVRTHTGDR 652
++C C F R ++R H++TH DR
Sbjct: 18 TFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.3 bits (63), Expect = 3.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 468 CGSEFHTRKNLLTHIRTHNTDR 489
C F R N+ +HI+TH DR
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.5 bits (61), Expect = 4.7
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 1975 RDFQCKV--CDRAFFDVYNLKLHMRIHTGEK 2003
+ F+C C + F YN++ H++ H ++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.7 bits (59), Expect = 9.6
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1181 EGDQVRYKC--SDCDKTYTRFYELKCHLMVHRGER 1213
E ++C C KT+ R Y ++ H+ H +R
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 33.7 bits (76), Expect = 0.031
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
KPY+C C + + K +L+ H R HTGEK
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 33.7 bits (76), Expect = 0.031
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
KPY+C C + + K +L+ H R HTGEK
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 30.6 bits (68), Expect = 0.40
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEK 1344
Y+C C +NL VH+R HTGEK
Sbjct: 10 YKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.4 bits (65), Expect = 0.93
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEK 1288
YKCP C ++ +L H+R HTGEK
Sbjct: 10 YKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 27.5 bits (60), Expect = 4.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 1975 RDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
+ ++C C A NL +H+R HTGEK
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 26.7 bits (58), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEK 270
+KCP+C + + L HL HTGEK
Sbjct: 10 YKCPQCSYASAIKANLNVHLRKHTGEK 36
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 33.2 bits (75), Expect = 0.033
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 1974 IRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
++ + C C R F D L+ H+RIHTGEK
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 32.0 bits (72), Expect = 0.090
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 1511 LKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
+KPY C C + +L H RIHTGEK
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 32.0 bits (72), Expect = 0.090
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 1635 LKPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
+KPY C C + +L H RIHTGEK
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 30.9 bits (69), Expect = 0.26
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 793 RPYICEYCNVSFKEKKSLVRHYKIHKG 819
+PY+C +C F + +L RH +IH G
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 30.1 bits (67), Expect = 0.47
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEK 1344
Y C C R D L+ H+R HTGEK
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 29.7 bits (66), Expect = 0.56
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 432 RTYPCTYCERKYQSPKTLKEHLKVHT 457
+ Y C +C+R++ P L+ H+++HT
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHT 27
Score = 28.2 bits (62), Expect = 2.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 1753 VCSYCGNSYANPGNLRTHMVVHSNK 1777
VC +C +A+PG L+ H+ +H+ +
Sbjct: 5 VCIHCQRQFADPGALQRHVRIHTGE 29
Score = 27.8 bits (61), Expect = 3.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 244 FKCPECPRSYGNFSELKKHLAVHTGEK 270
+ C C R + + L++H+ +HTGEK
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 26.6 bits (58), Expect = 7.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 626 YKCHICDSIFTRYDSLRLHVRTHTGDR 652
Y C C F +L+ HVR HTG++
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 26.3 bits (57), Expect = 9.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHTGEK 1288
Y C C + +LQ+H+R+HTGEK
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 33.3 bits (76), Expect = 0.036
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 1288 KPFSCQVCGKSFAAREHLKRHFNNIH 1313
K ++C +C ++F R+ L RH IH
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIH 26
Score = 27.9 bits (62), Expect = 2.9
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 652 RPYTCDVCGKSFVAKKHLNRHYNCSHAG 679
+ Y C +C ++F + L RH H+G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 26.7 bits (59), Expect = 7.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 348 KPYTCEACGKSFPLKRRLNAHYNKWHLG 375
K Y C C ++F + L H K H G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 32.5 bits (73), Expect = 0.059
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1511 LKPYECDTCGHGLSSKKSLDDHYRIHTG 1538
++PY C CG S K ++ HYR+HTG
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 32.5 bits (73), Expect = 0.059
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1635 LKPYECDTCGHGLSSKKSLDDHYRIHTG 1662
++PY C CG S K ++ HYR+HTG
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 28.2 bits (62), Expect = 2.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 652 RPYTCDVCGKSFVAKKHLNRHY 673
RPY+C VCGK F K + HY
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHY 23
Score = 28.2 bits (62), Expect = 2.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 348 KPYTCEACGKSFPLKRRLNAHY 369
+PY+C CGK F LK ++ HY
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHY 23
Score = 27.1 bits (59), Expect = 4.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 793 RPYICEYCNVSFKEKKSLVRHYKIHKG 819
RPY C C F K + HY++H G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 31.7 bits (71), Expect = 0.12
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 1319 QCNVCGRVLTDSSNLKVHMRNHTGEK 1344
QC +CG+ T +S+L H+R HTGEK
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 28.6 bits (63), Expect = 1.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1540
KP +C CG + SL H R HTGEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 28.6 bits (63), Expect = 1.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEK 1664
KP +C CG + SL H R HTGEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 27.0 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 628 CHICDSIFTRYDSLRLHVRTHTGDR 652
C +C FT+ SL HVR HTG++
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 26.7 bits (58), Expect = 6.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 1978 QCKVCDRAFFDVYNLKLHMRIHTGEK 2003
QC +C +AF +L H+R HTGEK
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 31.7 bits (71), Expect = 0.16
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 1537 TGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQKHVSA 1575
+ EK + C++CG F Q+ SL H+ H +N S
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG 46
Score = 31.3 bits (70), Expect = 0.27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 1661 TGEKKYVCQQCGASFTQWASLFYHKFSHSETRNQK 1695
+ EK + C++CG F Q+ SL H+ H +N
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
Score = 28.2 bits (62), Expect = 2.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHTGEKK 1541
K ++C CG SL +H +H G+K
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKN 40
Score = 28.2 bits (62), Expect = 2.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHTGEKK 1665
K ++C CG SL +H +H G+K
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKN 40
Score = 27.9 bits (61), Expect = 3.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 1341 TGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCS 1377
+ EK + C CG+ F Q+ S H+ H +++ S
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS 44
Score = 27.9 bits (61), Expect = 4.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 790 STERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S E+ + C C F + SL+ H +H G
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMG 37
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 31.3 bits (70), Expect = 0.18
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 789 HSTERPYICEYCNVSFKEKKSLVRHYKIH 817
S +RP++C C +F K + RH K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.3 bits (65), Expect = 0.85
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 648 HTGDRPYTCDVCGKSFVAKKHLNRH 672
+G RP+ C +C +F K + RH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARH 26
Score = 28.6 bits (63), Expect = 1.6
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRHF 1309
+G++PF C++C +F + + RH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHL 27
Score = 27.0 bits (59), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 762 SGDIKHICDTCGSEFNTRKNMLRHTKVHS 790
SG +C C S F T+ N RH KVH+
Sbjct: 3 SGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 26.6 bits (58), Expect = 8.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 1536 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRN 1569
+G++ +VC+ C ++FT A+ H H++T +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35
Score = 26.6 bits (58), Expect = 8.3
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 1660 HTGEKKYVCQQCGASFTQWASLFYHKFSHSETRN 1693
+G++ +VC+ C ++FT A+ H H++T +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS 35
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 36.2 bits (83), Expect = 0.18
Identities = 20/140 (14%), Positives = 35/140 (25%), Gaps = 22/140 (15%)
Query: 1979 CKVCDRAFFDVYNLK------LHMRIHTGEKKYVCETCGASFV----HWG-------SLN 2021
K+ D + R+ + ++ C+TC H+G +
Sbjct: 33 AKIRFPETMDETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHFGHIDLAKPVFH 92
Query: 2022 IHNYSHINA--QFVCSFCGN---TYKNPKSLDSHIRNSHTNRKKSICDDCTKAMSTPAPS 2076
+ + I + VC CG N + R +I C M
Sbjct: 93 VGFIAKIKKVCECVCMHCGKLLLDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDV 152
Query: 2077 SKSVCIEHSNLIPKCHSCQK 2096
C + Q
Sbjct: 153 PSEDDPTQLVSRGGCGNTQP 172
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.4 bits (70), Expect = 0.21
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 1802 STLRPFLCEFCNAGFKCRKHLLQHYRTHTKPK 1833
S+ + F CE+CN FK + L H R HT K
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 28.7 bits (63), Expect = 1.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 790 STERPYICEYCNVSFKEKKSLVRHYKIHKG 819
S+ + + CEYCN FK K SL H +IH
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 28.3 bits (62), Expect = 2.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1974 IRDFQCKVCDRAFFDVYNLKLHMRIHTGEK 2003
+ F C+ C++ F ++L+ H+RIHT EK
Sbjct: 7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 30.9 bits (69), Expect = 0.27
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 1774 HSNKNHICEICGKSFKKKDLLREHMIVHS 1802
S K H+C++CGK FK K L+ H ++H+
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHT 33
Score = 27.1 bits (59), Expect = 6.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 707 EKKYTCEICGTGFMYKSSLHHHKFSHSKE 735
K + C++CG F K +L HK H+ +
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 30.9 bits (69), Expect = 0.28
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1367 THSEERSFKCSYCAMTFRCPRTLTEHKKTH 1396
+ +E+ FKC+ C TF C + LT+H++ H
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 29.4 bits (65), Expect = 1.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 731 SHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSG 763
S KE+ F+C+ CEK + K L +HE+ H G
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRG 38
Score = 29.4 bits (65), Expect = 1.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1801 HSTLRPFLCEFCNAGFKCRKHLLQHYRTHTK 1831
+ F C C F C K+L QH R HT+
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTR 37
Score = 28.6 bits (63), Expect = 2.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 427 THIKDRTYPCTYCERKYQSPKTLKEHLKVHTSG 459
+ K++ + C CE+ + K L +H ++HT G
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRG 38
Score = 27.5 bits (60), Expect = 6.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 1284 HTGEKPFSCQVCGKSFAAREHLKRH 1308
EK F C C K+F+ ++L +H
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQH 31
Score = 27.1 bits (59), Expect = 7.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 343 SHTGEKPYTCEACGKSFPLKRRLNAH 368
S EK + C C K+F + L H
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQH 31
Score = 27.1 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1512 KPYECDTCGHGLSSKKSLDDHYRIHT 1537
K ++C+ C S K L H RIHT
Sbjct: 11 KCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.1 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 1636 KPYECDTCGHGLSSKKSLDDHYRIHT 1661
K ++C+ C S K L H RIHT
Sbjct: 11 KCFKCNKCEKTFSCSKYLTQHERIHT 36
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 35.2 bits (80), Expect = 0.29
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 576 KYTCSICSKCFFIKNRLSEHYRRVHKMRVSMARTN 610
Y C++C+ F + LSEH R H+ S
Sbjct: 116 SYVCNVCNARFSTMSALSEHLRSDHRDDASTLLAT 150
Score = 32.9 bits (74), Expect = 1.6
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 738 FQCSFCEKKYMSPKTLKEHEQT-HRSGD 764
+ C+ C ++ + L EH ++ HR
Sbjct: 117 YVCNVCNARFSTMSALSEHLRSDHRDDA 144
Score = 32.5 bits (73), Expect = 2.1
Identities = 16/79 (20%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Query: 130 IRSSREENDMKKKTMVYVEGVVKYKCPECGFMVKRFQGLREHIVSVHAQVKDHVCIVCGA 189
SS ND T + + V + V+ +VC VC A
Sbjct: 67 APSSSVNNDGDIITRPTSDSIAAVANATKPAAVVSDPQSMKVTPIVNP--SSYVCNVCNA 124
Query: 190 AFGLARRLKTHYIRRHTVN 208
F L H H +
Sbjct: 125 RFSTMSALSEHLRSDHRDD 143
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 33.0 bits (74), Expect = 0.31
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 493 CELCNANLKTRRSLLRHY--TTHGTQLAAIAFNNSQSSSSDHRLVKSEVQILEGDRIKYK 550
C++C+A L + L HY H ++ N S + K+ + + K
Sbjct: 35 CKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSK 94
Query: 551 -CPLCDRIYTSFSETKRHFE 569
CP+C+ ++S + H+
Sbjct: 95 CCPVCNMTFSSPVVAESHYI 114
Score = 31.9 bits (71), Expect = 0.91
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 7/92 (7%)
Query: 373 HLGKGYRCHICGSTMSNAANFKDHLDSHRGEKK----YTCETCGTGFAYKSSLYHHR-FT 427
H+ +C +C + + + + H S + K K +
Sbjct: 28 HIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEIS 87
Query: 428 HIKDRTYPCTYCERKYQSPKTLKEHL--KVHT 457
+DR+ C C + SP + H K H
Sbjct: 88 DGEDRSKCCPVCNMTFSSPVVAESHYIGKTHI 119
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 34.4 bits (78), Expect = 0.32
Identities = 7/51 (13%), Positives = 15/51 (29%)
Query: 408 CETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSPKTLKEHLKVHTS 458
E S HR ++ E+ +P+ L+ + +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVL 233
Score = 32.5 bits (73), Expect = 1.3
Identities = 8/41 (19%), Positives = 14/41 (34%)
Query: 1277 LQQHMRLHTGEKPFSCQVCGKSFAAREHLKRHFNNIHMKVG 1317
H L GEK + + E L+ + ++ G
Sbjct: 196 ETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQG 236
Score = 30.2 bits (67), Expect = 7.2
Identities = 7/53 (13%), Positives = 16/53 (30%)
Query: 1292 CQVCGKSFAAREHLKRHFNNIHMKVGYQCNVCGRVLTDSSNLKVHMRNHTGEK 1344
+ K + H N + Q +VL + +L+ + +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 30.2 bits (67), Expect = 7.3
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Query: 234 CQIMQGEKVKF-KCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQRGFFMKNRLNEHYK 292
I GE ++ + + + S+ H + GEK ++ L
Sbjct: 170 RDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229
Score = 29.8 bits (66), Expect = 7.9
Identities = 10/59 (16%), Positives = 15/59 (25%), Gaps = 2/59 (3%)
Query: 1509 ELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYH-KFSHSE 1566
L Y + L S H + GEK+ ++ L S
Sbjct: 177 WLRVWY-SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLR 234
Score = 29.8 bits (66), Expect = 7.9
Identities = 10/59 (16%), Positives = 15/59 (25%), Gaps = 2/59 (3%)
Query: 1633 ELLKPYECDTCGHGLSSKKSLDDHYRIHTGEKKYVCQQCGASFTQWASLFYH-KFSHSE 1690
L Y + L S H + GEK+ ++ L S
Sbjct: 177 WLRVWY-SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLR 234
Score = 29.8 bits (66), Expect = 9.4
Identities = 8/47 (17%), Positives = 13/47 (27%)
Query: 1922 CPDCPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMK 1968
D L + H ++ GEK +V L +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein
structure initiative, midwest center for structural
genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP:
e.59.1.1
Length = 309
Score = 34.8 bits (79), Expect = 0.33
Identities = 21/119 (17%), Positives = 30/119 (25%), Gaps = 20/119 (16%)
Query: 387 MSNAANFKDHLDSHRGEKKYTCETCGTGFAYKSSLYHHRFTHIKDRTYPCTYCERKYQSP 446
S+ + E + C CG+ + + R C+ C ++
Sbjct: 164 WSHWLLGLEEGAVVETESRTLCPACGS--PPMAGMIRQGGKETGLRYLSCSLCACEW--- 218
Query: 447 KTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTD---RTHVCELCNANLKT 502
H VR C C H L H R C C LK
Sbjct: 219 -----HY-------VRIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQ 265
Score = 32.9 bits (74), Expect = 1.2
Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 18/96 (18%)
Query: 699 DHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFCE-------------- 744
+ + E + C CG+ + + + R CS C
Sbjct: 172 EEGAVVETESRTLCPACGS--PPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCE 229
Query: 745 -KKYMSPKTLKEHEQTHRSGDIK-HICDTCGSEFNT 778
K+++ +L+ Q ++ C +C
Sbjct: 230 ESKHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQ 265
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 35.1 bits (80), Expect = 0.41
Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 22/144 (15%)
Query: 1979 CKVCDRAFFDVYNLK------LHMRIHTGEKKYVCETCGASFV----HWGSL-------N 2021
K+ D + L R+ T ++++ C+TCG + H+G + +
Sbjct: 35 AKIEFPETMDESGQRPRVGGLLDPRLGTIDRQFKCQTCGETMADCPGHFGHIELAKPVFH 94
Query: 2022 IHNYSHINA--QFVCSFCGNTYKNPKSLDSHIRNSHTNRKK---SICDDCTKAMSTPAPS 2076
I S I + VC CG + + + + + K ++ + C M
Sbjct: 95 IGFLSKIKKILECVCWNCGKLKIDSSNPKFNDTQRYRDPKNRLNAVWNVCKTKMVCDTGL 154
Query: 2077 SKSVCIEHSNLIPKCHSCQKCEES 2100
S + C +
Sbjct: 155 SAGSDNFDLSNPSANMGHGGCGAA 178
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 31.5 bits (71), Expect = 0.41
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 723 SSLHHHKFSHSKERMFQCSFCEKKYMSPKTLKEHEQTHRSGDIKHICDTCGSEFNTRKNM 782
S H+ + R+ C C+ + +S LKEHE G +C CG K++
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLE-LSILKLKEHEDY--CGARTELCGNCGRNV-LVKDL 58
Query: 783 LRHTKVHSTE 792
H +V E
Sbjct: 59 KTHPEVCGRE 68
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 30.5 bits (68), Expect = 0.55
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 651 DRPYTCDVCGKSFVAKKHLNRHYNCSH 677
D+PY CD+CGK + + L+ HY SH
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSH 31
Score = 29.4 bits (65), Expect = 1.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 1287 EKPFSCQVCGKSFAAREHLKRHFNNIHM 1314
+KP++C +CGK + R L H+ + H+
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSHL 32
Score = 27.8 bits (61), Expect = 4.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 347 EKPYTCEACGKSFPLKRRLNAHYNKWHL 374
+KPY C+ CGK + + L+ HY HL
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSHL 32
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain,
PRMT3, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: g.37.1.5
Length = 121
Score = 32.3 bits (73), Expect = 0.55
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 435 PCTYCERKYQSPKTLKEHLKVHTSGDVRHICQTCGSEFHTRKNLLTHIRTHNTDRTHVCE 494
PC +C+R + S + H K+ ++ + G EF+ L+ IR N ++
Sbjct: 17 PCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLKNPTVEYMNS 76
Query: 495 LCNA 498
+ N
Sbjct: 77 IYNP 80
>4ayb_A DNA-directed RNA polymerase; transferase, multi-subunit,
transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_A
2y0s_A 2waq_A 4b1o_A 4b1p_W 2pmz_A 3hkz_A
Length = 880
Score = 33.7 bits (77), Expect = 0.92
Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 25/117 (21%)
Query: 1997 RIHTGEKKYVCETCGASFV----HWGSL-------NIHNYSHINA--QFVCSFCGNTYKN 2043
R+ E C TCG + H+G + ++ H+ + C CG +
Sbjct: 48 RLGVIEPGQKCPTCGNTLGNCPGHFGHIELVRPVIHVGFVKHVYEFLKATCRRCGRVKIS 107
Query: 2044 PKSLDSHIRNSHTNRKKSICDDCTKAMSTPAPSSKSVCIEHSNLIPKCHSCQKCEES 2100
++ + R + +K+ +++ + K C C E
Sbjct: 108 EDEIEKYSRIYNAIKKRWPS------------AARRLTEYVKKTAMKAQVCPHCGEK 152
Score = 32.9 bits (75), Expect = 1.5
Identities = 17/110 (15%), Positives = 33/110 (30%), Gaps = 20/110 (18%)
Query: 1282 RLHTGEKPFSCQVCGKSFAA----REHLK--------RHFNNIHMKVGYQCNVCGRVLTD 1329
RL E C CG + H++ +++ + C CGRV
Sbjct: 48 RLGVIEPGQKCPTCGNTLGNCPGHFGHIELVRPVIHVGFVKHVYEFLKATCRRCGRVKIS 107
Query: 1330 SSNLKVHMRNHTGEKKYVCEICGKGFTQWASHYYHKFTHSEERSFKCSYC 1379
++ + R + K + A + ++ C +C
Sbjct: 108 EDEIEKYSRIY--------NAIKKRWPSAARRLTEYVKKTAMKAQVCPHC 149
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 29.3 bits (66), Expect = 1.1
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 432 RTYPCTYCERKYQSPKTLKEHLKVH 456
R+Y C++C+R+++S + L H+ VH
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
Score = 28.2 bits (63), Expect = 2.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 736 RMFQCSFCEKKYMSPKTLKEHEQTHR 761
R + CSFC++++ S + L H HR
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHR 30
Score = 26.6 bits (59), Expect = 9.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1372 RSFKCSYCAMTFRCPRTLTEHKKTH 1396
RS+ CS+C FR + L H H
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle;
NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Length = 192
Score = 32.3 bits (73), Expect = 1.2
Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 9/150 (6%)
Query: 245 KCPECPRSYGNFSELKKHLAVHTGEKHFVCSVCQR-----GFFMKNRLNEHYKRVHHMNF 299
KC C ++ F+E + + F+C VC++ + +E Y + +
Sbjct: 9 KCGVCQKAVY-FAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHG--DEIYCKSCYGKK 65
Query: 300 TSRDHDLRRETETNVDGVRKYKCPHPGCPSSFQRFNALQEHMLSHTGEKPYTCEACGKSF 359
+ + + R ++ C CG++
Sbjct: 66 YGPKGKGKGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQKVGGSDGCPRCGQAV 125
Query: 360 PLKRRLNAHYNKWHLGKGYRCHICGSTMSN 389
++ WH +RC CG ++ +
Sbjct: 126 YAAEKVIGAGKSWHKS-CFRCAKCGKSLES 154
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 29.1 bits (64), Expect = 1.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 241 KVKFKCPECPRSYGNFSELKKHLAVHTGE 269
K +C EC + + + S L +H A+H GE
Sbjct: 10 KTTSECQECGKIFRHSSLLIEHQALHAGE 38
>3ov0_A Cytochrome C family protein; multiheme cytochrome C, electron
transfer, Fe reduction, GEO sulfurreducens; HET: HEM;
3.20A {Geobacter sulfurreducens}
Length = 318
Score = 32.3 bits (71), Expect = 1.5
Identities = 33/280 (11%), Positives = 69/280 (24%), Gaps = 12/280 (4%)
Query: 465 CQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLKTRRSLLRHYTTHGTQLAAIAFNN 524
C+ C + + ++ C C+ +K +A
Sbjct: 31 CRICHIALFDLRKP-KRYTMLDMEKGKSCGACHTGMKAFSVADDSQCVRCHSGSARPVAY 89
Query: 525 SQSSSSDHRLVKSEVQILEGDRIKYKCPLC-DRIYTSFSETKRHFEVHSGERKYTCSICS 583
+ + + ++ KC C + ++ G+ C
Sbjct: 90 RMKGAGEAVFSHE----VHVPMLEGKCRTCHSNREITGGRNVTMAQMEKGKSCGACHNDK 145
Query: 584 KCFFIKNRLSEHYRRVHKMRVSMARTNDVKKSAEISVDGVTKYKCHICDSIFTRYDSLRL 643
F + + ++ + + + V +A + YKC+ C + Y +
Sbjct: 146 MAFTVAGNCGKCHKGMTPPKTVNFKMKGVADAAFSHEFHLGMYKCNECHTKLFAYKAGAK 205
Query: 644 HVRTHTGDRPYTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDHLDN 703
D+ +C C A + C + V + HL
Sbjct: 206 RFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTYKTSVGEAYFDHDIHLSM 265
Query: 704 HKGEKKYTCEICGTGFMYKSSLHHHKFSHSKERMFQCSFC 743
+ C C T E+ C C
Sbjct: 266 ------FKCADCHTKVFKYRKGSAPATMADMEKGKSCGVC 299
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 31.7 bits (71), Expect = 2.0
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 14/80 (17%)
Query: 29 SSESTIRAPSMLMKHWR-----RVHKSAGVDLLTEEELREKSAVEIDGEIKFQCPDCHTM 83
+ + ++ WR R+ + + E+E REK+ +++ + Q +
Sbjct: 75 AQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSE---QV 131
Query: 84 MKNFAYLKKHVRDNHSGETF 103
KN K + R + F
Sbjct: 132 EKN----KINNRIAD--KAF 145
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 402
Score = 32.1 bits (72), Expect = 2.0
Identities = 11/73 (15%), Positives = 25/73 (34%)
Query: 1925 CPTILQTFRGLKAHLDIHSGEKDYACHICNKVFVRHSTLENHMKAVHEKIRDFQCKVCDR 1984
I F + S K C C++ F S E+H+ K + + +
Sbjct: 270 ENLIKSDFEHSYCRGSLRSEAKGIYCPFCSRWFKTSSVFESHLVGKIHKKNESKRRNFVY 329
Query: 1985 AFFDVYNLKLHMR 1997
+ + ++ ++
Sbjct: 330 SEYKLHRYLKYLN 342
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 37
Score = 27.9 bits (61), Expect = 2.9
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 889 KTHSCIYCEESFSDSKFLDAHVNIEH 914
+++SC CE+SFS+ + + +H+ H
Sbjct: 8 RSYSCPVCEKSFSEDRLIKSHIKTNH 33
Score = 27.1 bits (59), Expect = 6.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 99 SGETFSCDECSKSFTTKKCLREHYKKLH 126
SG ++SC C KSF+ + ++ H K H
Sbjct: 6 SGRSYSCPVCEKSFSEDRLIKSHIKTNH 33
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR complex
function; HET: ADP; 2.31A {Pyrococcus furiosus} PDB:
3ur3_C 4doz_A
Length = 693
Score = 31.6 bits (70), Expect = 3.5
Identities = 14/118 (11%), Positives = 35/118 (29%), Gaps = 3/118 (2%)
Query: 1297 KSFAAREHLKRHFNNIHMKVGYQCNVCGR--VLTDSSNLKVHMRNHTGEKKYVCEICGKG 1354
S R+ + F G++C+VCG + ++++ +++ +C +C
Sbjct: 247 DSLGERKVTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPMCLIK 306
Query: 1355 FTQWASHYYHKFTHSEERSFKCSYCAMTFRCPRTLTEHKKTHVLSDVKHVCNTCGNEY 1412
K + + E ++S + V +
Sbjct: 307 RYYP-VWIRSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLVSKAREVSEDFVKDN 363
Score = 30.4 bits (67), Expect = 8.2
Identities = 15/137 (10%), Positives = 36/137 (26%), Gaps = 2/137 (1%)
Query: 696 NFKDHLDNHKGEKKYTCEICGTGFMYKSSLHHHKFSHS--KERMFQCSFCEKKYMSPKTL 753
++ + + K + C +CG ++ H S + C C K P +
Sbjct: 254 VTEERFEKSEQLKGWKCHVCGENLAIFGDMYDHDNLKSLWLDEEPLCPMCLIKRYYPVWI 313
Query: 754 KEHEQTHRSGDIKHICDTCGSEFNTRKNMLRHTKVHSTERPYICEYCNVSFKEKKSLVRH 813
+ + + + + S R ++ + L
Sbjct: 314 RSKTGQKIRFESVVDVALLYKNWRKIFDEKYGKDLVSKAREVSEDFVKDNMLVDSDLYYS 373
Query: 814 YKIHKGVNTNTLPSNDI 830
G++ +I
Sbjct: 374 STWESGLSKKLKNKKEI 390
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 35
Score = 27.9 bits (61), Expect = 3.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 1943 SGEKDYACHICNKVFVRHSTLENHMKAVHE 1972
SG Y C +C K FV L +H++ VH
Sbjct: 3 SGSSGYVCALCLKKFVSSIRLRSHIREVHG 32
Score = 27.5 bits (60), Expect = 4.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 572 SGERKYTCSICSKCFFIKNRLSEHYRRVH 600
SG Y C++C K F RL H R VH
Sbjct: 3 SGSSGYVCALCLKKFVSSIRLRSHIREVH 31
Score = 27.1 bits (59), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 267 TGEKHFVCSVCQRGFFMKNRLNEHYKRVH 295
+G +VC++C + F RL H + VH
Sbjct: 3 SGSSGYVCALCLKKFVSSIRLRSHIREVH 31
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 27.9 bits (61), Expect = 3.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1803 TLRPFLCEFCNAGFKCRKHLLQHYRTHTKPKATNS 1837
T + + C C A F RKHL+QH +TH +S
Sbjct: 9 TRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS 43
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 27.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 792 ERPYICEY--CNVSFKEKKSLVRHYKIH 817
+RPY C++ C+ +F L+RH K H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 27.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 318 RKYKCPHPGCPSSFQRFNALQEHMLSHT 345
R Y C HPGC +F R + L H SH
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 26.8 bits (59), Expect = 6.1
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 625 KYKCHICDSIFTRYDSLRLHVRTHTGDRP 653
K+ C C F R D L H+ H
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGE 30
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex,
restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE;
1.50A {Helicobacter pylori} PDB: 3fc3_A*
Length = 200
Score = 30.2 bits (67), Expect = 6.3
Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 14/118 (11%)
Query: 395 DHLDSHRGEKKYTCETCGTGFAYKS-SLYHHRFTHIKDRTYPCTYC---------ERKYQ 444
D + +G K C C K+ + T K R C +
Sbjct: 65 DIYRTGKGYDKKICNICH---ILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSS 121
Query: 445 SPKTLKEHLKVHTSGDVR-HICQTCGSEFHTRKNLLTHIRTHNTDRTHVCELCNANLK 501
+ K + + IC+ T + H R +C+ CN L
Sbjct: 122 TEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTGLG 179
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A
{Xylella fastidiosa}
Length = 291
Score = 30.6 bits (69), Expect = 6.4
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 9/102 (8%)
Query: 829 DIIKHMRNAHQYDIIQAQDYLIQSTQEIDLPCEMCGELNLFSKYCKEHGIVCEESDTYKK 888
H + + ++ + Y + E + + + K + G+ E+ Y
Sbjct: 89 FERIHDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKLGVCPEKEWPYGD 148
Query: 889 KTHSCIYCEESF--------SDSKFLDA-HVNIEHGKRVHGD 921
E SD + DA + I RV D
Sbjct: 149 TPADPRTEEFPPGAPASKKPSDQCYKDAQNYKITEYSRVAQD 190
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding
protein, DNA deadenylas hydrolase; 1.80A
{Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Length = 204
Score = 30.1 bits (67), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 244 FKCPECPRSYGN-FSELKKHLAVH 266
KC C ++G F++LK HL
Sbjct: 170 LKCWRCGETFGRHFTKLKAHLQEE 193
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 27.9 bits (62), Expect = 7.4
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 654 YTCDVCGKSFVAKKHLNRHYNCSHAGFGYQCNICGRVMSDSTNFKDH 700
+TC+ CG+S V K + +H + C CG ++K H
Sbjct: 11 FTCNACGES-VKKIQVEKHVSNCRNCECLSCIDCG-KDFWGDDYKSH 55
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of
[NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET:
APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB:
3vti_A
Length = 761
Score = 30.5 bits (69), Expect = 7.5
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 17/89 (19%)
Query: 1697 EESFDNCNNLWSHMFIKHEDSDFVCNLCPPDSKIVIKYAHLLERHMKKHHTMQQRCVCSY 1756
E D + + + FI C C P I+ + +R +M+ +C
Sbjct: 119 RELKDPKDRRYRYPFIN-------CTNCGPRFSIIEDIPY--DR---AKTSMKVFPMCEK 166
Query: 1757 CGNSYANPGNLRTHMVVHSNKNHICEICG 1785
C Y +P + R H + C CG
Sbjct: 167 CSREYHDPHDRRFHAQPVA-----CFDCG 190
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 26.4 bits (58), Expect = 7.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 625 KYKCHICDSIFTRYDSLRLHVRTHTGDR 652
K+ C C F R D L LH+ H +
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 27
Score = 26.3 bits (57), Expect = 8.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 1262 YKCPLCPSITSRYDSLQQHMRLHT 1285
Y+CPLC + S+Q HMR H+
Sbjct: 4 YRCPLCRAGCPSLASMQAHMRGHS 27
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.8 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 1318 YQCNVCGRVLTDSSNLKVHMRNHTGEK 1344
++C++C SNLK HM H+ EK
Sbjct: 10 FKCSLCEYATRSKSNLKAHMNRHSTEK 36
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.133 0.432
Gapped
Lambda K H
0.267 0.0472 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 33,605,043
Number of extensions: 2000141
Number of successful extensions: 17150
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14401
Number of HSP's successfully gapped: 5367
Length of query: 2227
Length of database: 6,701,793
Length adjustment: 109
Effective length of query: 2118
Effective length of database: 3,658,404
Effective search space: 7748499672
Effective search space used: 7748499672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.4 bits)