RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11588
(459 letters)
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 42.8 bits (101), Expect = 1e-06
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 339 HMRIHTGEKKYVCETCGASFVQWGSLNQHNLVHTAV 374
R TG K + C C SF + L H H V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 34.7 bits (80), Expect = 9e-04
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 423 HMAVHTTDRPFVCDMCPSAFKLKKHLQQHYKVHL 456
T +PF C C +F HL H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 30.9 bits (70), Expect = 0.020
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 314 VHEKVRDHQCSVCGKAFADITNMKVHMRIHTG 345
++ QC C ++F+ ++ +H + H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 27.8 bits (62), Expect = 0.24
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 282 HLDIHSGEKDHCCHICKKVFLRYRNLVCHIK 312
+G K C C + F R +L H K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 24.3 bits (53), Expect = 5.0
Identities = 7/30 (23%), Positives = 9/30 (30%)
Query: 399 HTIRQKSICDVCGKEFKMKKRLKEHMAVHT 428
T + C C + F L H H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 42.7 bits (101), Expect = 1e-06
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 321 HQCSVCGKAFADITNMKVHMR-IHTGEKKYVCE 352
+ C CGK F+ ++ H++ +HT E+ + C+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 33.8 bits (78), Expect = 0.002
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 407 CDVCGKEFKMKKRLKEHM-AVHTTDRPFVCDM 437
C CGK F L H+ VHT++RP C +
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 28.0 bits (63), Expect = 0.23
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 344 TGEKKYVCETCGASFVQWGSLNQHN-LVHT 372
+ K Y+C++CG F + LN H VHT
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHT 30
Score = 27.7 bits (62), Expect = 0.31
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 428 TTDRPFVCDMCPSAFKLKKHLQQHYK 453
+ +P++C C F HL H K
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIK 26
Score = 26.1 bits (58), Expect = 1.1
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 91 FVCKMCGHRLFMRLSDLRRHMQDYH 115
++C+ CG F R L H++ H
Sbjct: 6 YICQSCGKG-FSRPDHLNGHIKQVH 29
Score = 23.8 bits (52), Expect = 7.1
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 378 CSYCGNTYKNPKSLESHIRYAHTIRQKSICDV 409
C CG + P L HI+ HT + C V
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 23.8 bits (52), Expect = 7.3
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 264 YKCPDCSAILLSYGGFTSHL-DIHSGEKDHCCHI 296
Y C C H+ +H+ E+ H C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 42.2 bits (100), Expect = 2e-06
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIHTGEK 347
R C VC +AFA ++K H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.1 bits (66), Expect = 0.058
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 347 KKYVCETCGASFVQWGSLNQHNLVHT 372
+ +VCE C +F + L +H HT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHT 26
Score = 28.7 bits (65), Expect = 0.098
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 431 RPFVCDMCPSAFKLKKHLQQHYKVH 455
R FVC++C AF ++HL++HY+ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 28.4 bits (64), Expect = 0.13
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C+VC + F ++ LK H HT
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHT 26
Score = 23.0 bits (50), Expect = 9.3
Identities = 6/27 (22%), Positives = 9/27 (33%)
Query: 264 YKCPDCSAILLSYGGFTSHLDIHSGEK 290
+ C C+ H H+ EK
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 42.1 bits (99), Expect = 2e-06
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 339 HMRIHTGEKKYVCETCGASFVQWGSLNQHNLVHT 372
++Y C+ CG SF L++H HT
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
Score = 35.1 bits (81), Expect = 7e-04
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 312 KAVHEKVRDHQCSVCGKAFADITNMKVHMRIHTGE 346
+ + R ++C CGK+F+ +++ H R HTGE
Sbjct: 4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 34.8 bits (80), Expect = 8e-04
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 423 HMAVHTTDRPFVCDMCPSAFKLKKHLQQHYKVH 455
R + CD C +F L +H + H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 24.4 bits (53), Expect = 3.7
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 399 HTIRQKSICDVCGKEFKMKKRLKEHMAVHT 428
R++ CD CGK F L +H HT
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 41.8 bits (99), Expect = 2e-06
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 314 VHEKVRDHQCSVCGKAFADITNMKVHMRIHTGE 346
+H + + C CGKAF+ + + H R+HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 41.5 bits (98), Expect = 3e-06
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 342 IHTGEKKYVCETCGASFVQWGSLNQHNLVHT 372
IH+GEK Y C CG +F + L QH VHT
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 33.7 bits (78), Expect = 0.002
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 426 VHTTDRPFVCDMCPSAFKLKKHLQQHYKVH 455
+H+ ++P+ C C AF L QH +VH
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 28.7 bits (65), Expect = 0.10
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C CGK F L +H VHT
Sbjct: 10 CVECGKAFSRSSILVQHQRVHT 31
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 41.6 bits (98), Expect = 3e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 323 CSVCGKAFADITNMKVHMRIHTGEKKYVCE 352
CGK+F ++K HM++H+ + Y+CE
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 32.4 bits (74), Expect = 0.005
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHTTDRPFVCD 436
CGK F KK LKEHM +H+ R ++C+
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.4 bits (95), Expect = 7e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 341 RIHTGEKKYVCETCGASFVQWGSLNQHNLVHTAVN 375
R HTGEK Y C C +F Q L+ H + N
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 37.3 bits (87), Expect = 9e-05
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 314 VHEKVRDHQCSVCGKAFADITNMKVHMRIHTGEK 347
H + + CS C K F + +H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 32.7 bits (75), Expect = 0.005
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 426 VHTTDRPFVCDMCPSAFKLKKHLQQHYKVH 455
HT ++P+ C C F+ K+ L H+K +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 26.9 bits (60), Expect = 0.49
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 399 HTIRQKSICDVCGKEFKMKKRLKEHMAVHT 428
HT + C C K F+ K+ L H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.4 bits (95), Expect = 9e-06
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 341 RIHTGEKKYVCETCGASFVQWGSLNQHNLVHT 372
R H+GEK Y C C A F Q G++ H L
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 32.6 bits (75), Expect = 0.004
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 314 VHEKVRDHQCSVCGKAFADITNMKVH-MRIHTGE 346
H + ++C +C F MK+H ++ HT
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 31.9 bits (73), Expect = 0.009
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 285 IHSGEKDHCCHICKKVFLRYRNLVCHIKAVH 315
HSGEK + C+IC F + + HI H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 30.0 bits (68), Expect = 0.043
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 426 VHTTDRPFVCDMCPSAFKLKKHLQQHYKVH 455
H+ ++P+ C +C + F ++ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 26.5 bits (59), Expect = 0.78
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 399 HTIRQKSICDVCGKEFKMKKRLKEHMAVHTTD 430
H+ + C +C F +K H+ T+
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 24.2 bits (53), Expect = 4.6
Identities = 7/27 (25%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 91 FVCKMCGHRLFMRLSDLRRHMQDYHCE 117
+ C +C R F + ++ H+ H E
Sbjct: 9 YECYICHAR-FTQSGTMKMHILQKHTE 34
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 39.9 bits (93), Expect = 2e-05
Identities = 9/46 (19%), Positives = 22/46 (47%)
Query: 302 LRYRNLVCHIKAVHEKVRDHQCSVCGKAFADITNMKVHMRIHTGEK 347
L ++ ++K + +K + C K F N++ H++ H ++
Sbjct: 2 LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 30.3 bits (68), Expect = 0.039
Identities = 6/36 (16%), Positives = 12/36 (33%), Gaps = 2/36 (5%)
Query: 339 HMRIHTGEKKYVCETCGA--SFVQWGSLNQHNLVHT 372
+K + C G +F + ++ H H
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL 44
Score = 25.7 bits (56), Expect = 1.9
Identities = 9/44 (20%), Positives = 20/44 (45%)
Query: 388 PKSLESHIRYAHTIRQKSICDVCGKEFKMKKRLKEHMAVHTTDR 431
S++ +++ + + C K FK + ++ H+ H DR
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 23.7 bits (51), Expect = 9.3
Identities = 7/42 (16%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 416 MKKRLKEHMAVHTTDRPFVCDMCPS--AFKLKKHLQQHYKVH 455
+ + + D+ F C FK + +++ H + H
Sbjct: 2 LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 38.9 bits (91), Expect = 2e-05
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 321 HQCSVCGKAFADITNMKVHMRIHTGEK 347
C C K F ++ H++ H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 28.5 bits (64), Expect = 0.13
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 347 KKYVCETCGASFVQWGSLNQHNLVHT 372
KK+ C C F++ L++H H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQ 26
Score = 26.9 bits (60), Expect = 0.38
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C C K F L +H+ H
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQ 26
Score = 25.8 bits (57), Expect = 1.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 431 RPFVCDMCPSAFKLKKHLQQHYKVH 455
+ F C CP F HL +H K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
Score = 23.1 bits (50), Expect = 8.8
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 264 YKCPDCSAILLSYGGFTSHLDIHSGEK 290
+ CP+C + + H+ H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 38.0 bits (89), Expect = 5e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 321 HQCSVCGKAFADITNMKVHMRIHTG 345
QC +C + F+ ++ H+R HTG
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 31.0 bits (71), Expect = 0.013
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 346 EKKYVCETCGASFVQWGSLNQHNLVHT 372
+K + C C +F + L H HT
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 27.6 bits (62), Expect = 0.26
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C +C + F L H+ HT
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHT 27
Score = 27.2 bits (61), Expect = 0.29
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 431 RPFVCDMCPSAFKLKKHLQQHYKVH 455
+PF C +C F HL H + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 37.7 bits (88), Expect = 6e-05
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 319 RDHQCSV--CGKAFADITNMKVHMRIHTGEK 347
R C+ CGK F ++ H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 24.6 bits (54), Expect = 3.4
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 347 KKYVC--ETCGASFVQWGSLNQHNLVHT 372
+ ++C CG F + L +H HT
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHT 28
Score = 24.2 bits (53), Expect = 3.7
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 410 CGKEFKMKKRLKEHMAVHT 428
CGK F L+ H HT
Sbjct: 10 CGKRFTRSDELQRHKRTHT 28
Score = 24.2 bits (53), Expect = 4.0
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 431 RPFVCDM--CPSAFKLKKHLQQHYKVH 455
RPF+C C F LQ+H + H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 36.2 bits (84), Expect = 2e-04
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 319 RDHQCSV--CGKAFADITNMKVHMRIHTGE 346
+ H+C+ C K+++ + N+K H+R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 24.6 bits (54), Expect = 2.6
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 347 KKYVC--ETCGASFVQWGSLNQHNLVHT 372
K + C E C S+ + +L H HT
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
Score = 24.6 bits (54), Expect = 3.3
Identities = 6/27 (22%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 431 RPFVCD--MCPSAFKLKKHLQQHYKVH 455
+P C C ++ ++L+ H + H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 24.2 bits (53), Expect = 3.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 410 CGKEFKMKKRLKEHMAVHT 428
C K + + LK H+ HT
Sbjct: 10 CRKSYSRLENLKTHLRSHT 28
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 35.5 bits (82), Expect = 5e-04
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 343 HTGEKKYVCETCGASFVQWGSLNQHNLVHT 372
+G++ +VC C ++F + +H VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 34.0 bits (78), Expect = 0.001
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIHTGE 346
R C +C AF N H+++HT
Sbjct: 6 RPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 29.7 bits (67), Expect = 0.044
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 427 HTTDRPFVCDMCPSAFKLKKHLQQHYKVH 455
+ RPFVC +C SAF K + +H KVH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 27.0 bits (60), Expect = 0.41
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C +C F K H+ VHT
Sbjct: 10 CRICLSAFTTKANCARHLKVHT 31
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 35.8 bits (82), Expect = 5e-04
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 326 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFVQWGSLNQHNLVH 371
CGK+F + HM +H G + Y C CG F L H +H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 35.4 bits (81), Expect = 7e-04
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 410 CGKEFKMKKRLKEHMAVHTTDRPFVCDMCPSAFKLKKHLQQHYKVH 455
CGK F K + HM++H RP+ C +C FK+K HL H K+H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 34.3 bits (78), Expect = 0.002
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 289 EKDHCCHICKKVFLRYRNLVCHIKAVHEKVRDHQCSVCGKAFADITNMKVHMRIH 343
+K + C C K F H+ +H +R + C VCGK F ++ HM+IH
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.5 bits (63), Expect = 0.18
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 381 CGNTYKNPKSLESHIRYAHTIRQKSICDVCGKEFKMKKRLKEHMAVH 427
CG ++ + + H+ H + C VCGK+FKMK L HM +H
Sbjct: 8 CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 32.7 bits (74), Expect = 0.004
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIHTGE 346
R H C+ CGKAF + + +K H +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 26.5 bits (58), Expect = 0.53
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 347 KKYVCETCGASFVQWGSLNQHNLVHTA 373
+ +VC CG +FV+ L +H LVHT
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTG 27
Score = 25.0 bits (54), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 406 ICDVCGKEFKMKKRLKEHMAVHT 428
+C CGK F +LK H VHT
Sbjct: 4 VCAECGKAFVESSKLKRHQLVHT 26
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 32.3 bits (74), Expect = 0.004
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 319 RDHQCSV--CGKAFADITNMKVHMRIHTG 345
R + C V C + F+ ++ H+RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 25.0 bits (55), Expect = 1.9
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 431 RPFVCD--MCPSAFKLKKHLQQHYKVH 455
RP+ C C F L +H ++H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 24.6 bits (54), Expect = 3.0
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 347 KKYVC--ETCGASFVQWGSLNQHNLVHT 372
+ Y C E+C F + L +H +HT
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 32.3 bits (74), Expect = 0.005
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 319 RDHQCSV--CGKAFADITNMKVHMRIHTGE 346
+ QC+ CGK F+ N++ H+RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 23.5 bits (51), Expect = 6.7
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 347 KKYVC--ETCGASFVQWGSLNQHNLVHT 372
K + C E CG F +L H +HT
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28
Score = 23.1 bits (50), Expect = 9.4
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 431 RPFVCD--MCPSAFKLKKHLQQHYKVH 455
+PF C C F L +L+ H ++H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 32.3 bits (74), Expect = 0.006
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 319 RDHQCSV--CGKAFADITNMKVHMRIHTGE 346
R + C C KAF ++ H + H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 27.7 bits (62), Expect = 0.21
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 430 DRPFVCD--MCPSAFKLKKHLQQHYKVHLKK 458
DRP+ CD C AF L +H K H +K
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 26.5 bits (59), Expect = 0.61
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 346 EKKYVC--ETCGASFVQWGSLNQHNLVHT 372
++ Y C C +FV+ L +H H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 31.8 bits (73), Expect = 0.006
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 321 HQCSVCGKAFADITNMKVHMRIHT 344
++C CGKAF+ + + H RIHT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 27.2 bits (61), Expect = 0.31
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 347 KKYVCETCGASFVQWGSLNQHNLVHT 372
K Y C CG +F Q L H +HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 26.0 bits (58), Expect = 0.88
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 431 RPFVCDMCPSAFKLKKHLQQHYKVH 455
+P+ C C AF L H ++H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 24.9 bits (55), Expect = 2.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C CGK F L H +HT
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 32.0 bits (72), Expect = 0.008
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIHTGEKKY 349
+ C +CGK F D+ ++ H H+GEK Y
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.6 bits (58), Expect = 0.78
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 401 IRQKSICDVCGKEFKMKKRLKEHMAVHTTDRPF 433
R++ C++CGK F+ L H H+ ++P+
Sbjct: 2 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.6 bits (67), Expect = 0.051
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 319 RDHQCSV--CGKAFADITNMKVHMRIHT 344
R + C C K FA TN+K H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 23.5 bits (51), Expect = 6.6
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 431 RPFVCD--MCPSAFKLKKHLQQHYKVH 455
RP+VC C F +L+ H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.9 bits (64), Expect = 0.083
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 321 HQCSVCGKAFADITNMKVHMRIHTG 345
H+C VCGK F+ +K HMR HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.6 bits (53), Expect = 3.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHT 428
C+VCGK F K +LK HM HT
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHT 25
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 27.6 bits (61), Expect = 0.40
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHTT 429
C +CGK F RL++H A H
Sbjct: 9 CGLCGKVFTDANRLRQHEAQHGV 31
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 26.7 bits (59), Expect = 0.56
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 430 DRPFVCDMCPSAFKLKKHLQQHYKVHLK 457
++PF CD+C F ++H K+HL+
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHLR 28
Score = 24.0 bits (52), Expect = 4.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIH 343
+ C +CG+ FA K H +IH
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 23.2 bits (50), Expect = 8.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 406 ICDVCGKEFKMKKRLKEHMAVH 427
CD+CG++F K H +H
Sbjct: 5 ACDICGRKFARSDERKRHTKIH 26
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 26.2 bits (57), Expect = 0.66
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 322 QCSVCGKAFADITNMKVHMRIHTGEK 347
+C C K F +KVH R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 26.2 bits (58), Expect = 0.72
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 323 CSVCGKAFADITNMKVHMRIHTGE 346
CS + F + VHMR HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 26.2 bits (58), Expect = 0.88
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIHTGEK 347
R + CS C + F + HM +H ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 25.8 bits (57), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 407 CDVCGKEFKMKKRLKEHMAVHTTDR 431
C C +EF+ + L HM VH DR
Sbjct: 8 CSFCKREFRSAQALGGHMNVHRRDR 32
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 29.1 bits (65), Expect = 0.99
Identities = 22/119 (18%), Positives = 32/119 (26%), Gaps = 21/119 (17%)
Query: 312 KAVHEKVRDHQCSVCGKAFADITNMKVHMRIHTGEKKYVCETCGASFVQWGSLNQHNLVH 371
AV E C CG + M TG + C C +W + V
Sbjct: 156 GAVVETESRTLCPACGSP--PMAGMIRQGGKETGLRYLSCSLCAC---EW------HYVR 204
Query: 372 TAVNVVCSYCGNT----YKNPKSLESHIRYAHTIRQKSICDVCGKEFKMKKRLKEHMAV 426
CS+C + Y + + A + C C K + A
Sbjct: 205 IK----CSHCEESKHLAYLSLEHDGQPAEKAV--LRAETCPSCQGYLKQFYLEFDRHAD 257
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 367
Score = 28.8 bits (63), Expect = 1.6
Identities = 20/204 (9%), Positives = 48/204 (23%), Gaps = 14/204 (6%)
Query: 174 HSNLIPKCHSCQKCEESFDNCNNLWSHMFIKHENSDFVCNLCPSHSKVLVRYVHSAVRHM 233
S + + + Q+ + K++ S +VL V ++
Sbjct: 125 LSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNV 184
Query: 234 KKHHKLQLSIPKAHNYFRKKTVIHVNKKVNYKCPDCSAILLSYGGFTSHLDIHSGEKDHC 293
+ L + R+ + ++ + A+L+ + D
Sbjct: 185 SSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVK 244
Query: 294 CHICKKVFLRYRNLVCHIKAVHEKVRDHQCSVCGKAFADITNMKVHMR------------ 341
+ + + + T M
Sbjct: 245 ELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGV 304
Query: 342 --IHTGEKKYVCETCGASFVQWGS 363
+ +G+ GAS VQ +
Sbjct: 305 GGVSSGQDALEKIRAGASLVQLYT 328
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 256
Score = 28.0 bits (62), Expect = 2.5
Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 11/113 (9%)
Query: 51 LYTKDVYHCADCEQVFLDKFVL--------ELHLKIEHKDNMFPKSHWFVCKMCGHRLFM 102
LY + V+ + E + + +L L + + K + K +L
Sbjct: 72 LYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIE 131
Query: 103 RLSDLRRHMQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVLSKYCIKHQD 155
+++ + + F +L +L K D
Sbjct: 132 AFNEIAEDSEQF---EKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVD 181
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.0 bits (54), Expect = 2.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 319 RDHQCSVCGKAFADITNMKVHMRIHTGE 346
R +C +C A + + + VH+R HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 24.7 bits (53), Expect = 2.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 323 CSVCGKAFADITNMKVHMRIHTGE 346
CSVC + F +++HM HTGE
Sbjct: 7 CSVCQETFRRRMELRLHMVSHTGE 30
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG,
N-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 119
Score = 26.5 bits (58), Expect = 3.1
Identities = 9/49 (18%), Positives = 18/49 (36%)
Query: 411 GKEFKMKKRLKEHMAVHTTDRPFVCDMCPSAFKLKKHLQQHYKVHLKKD 459
G+E K K L++ + + P+ ++ +V KK
Sbjct: 12 GQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKL 60
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 26.0 bits (57), Expect = 4.6
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 184 CQKCEESFDNCNNLWSHMFIKH 205
C C+ F + +SH ++H
Sbjct: 18 CLFCDRLFASAEETFSHCKLEH 39
>d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 415
Score = 26.8 bits (58), Expect = 5.4
Identities = 18/221 (8%), Positives = 47/221 (21%), Gaps = 10/221 (4%)
Query: 47 FHSALYTKDVYHCADCEQVFLDKFVLELHLKIEHKDNMFPKSHWFVCKMCGHRLFMRLSD 106
+ + + +++ + + + +
Sbjct: 128 IYKKKAKNPNNSEEQKLLYDVVQRAMKVFINATYGVFGAETFPLY-APRVAESVTALGRY 186
Query: 107 LRRHMQDYHCEFHFDVESCAVSRLQDITFPCEECKELCVL-SKYCIKHQDCSKAMSTPAP 165
+ E V L + P + + + K A
Sbjct: 187 VITSTVKKAREEGLTVLYGDTDSLFLLNPPKNSLENIIKWVKTTFNLDLEVDKTYKFVAF 246
Query: 166 SSESVCIKHSNLIPKCHSCQKCEESFDNCN------NLWSHMFIKHENSDFVCNLCPSHS 219
S K + + N + I + + V +
Sbjct: 247 SGLKKNYFGVYQDGKVDIKGMLVKKRNTPEFVKKVFNEVKELMISINSPNDVKEIKRKIV 306
Query: 220 KVLVRYVHSAVRHMKKHHKL--QLSIPKAHNYFRKKTVIHV 258
V+ +L ++ + K + ++K T HV
Sbjct: 307 DVVKGSYEKLKNKGYNLDELAFKVMLSKPLDAYKKNTPQHV 347
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.6 bits (50), Expect = 6.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 318 VRDHQCSVCGKAFADITNMKVHMRIHT 344
V+ ++C C A AD +++ H+RIH+
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIHS 27
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 26.4 bits (58), Expect = 6.3
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 321 HQCSVCGKAFADITNMKVHMRIHTGEK 347
++C CGK + DI N++ H+R H G K
Sbjct: 147 YKCEECGK-YVDIENLEAHLREH-GIK 171
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 24.7 bits (54), Expect = 7.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 321 HQCSVCGKAFADITNMKVHMR 341
H+C C + F D TN+K H R
Sbjct: 16 HRCLACARYFIDSTNLKTHFR 36
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 23.3 bits (50), Expect = 8.3
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 377 VCSYCGNTYKNPKSLESHIRYAHT 400
+C CG K P L+ HIR HT
Sbjct: 3 ICEECGIRAKKPSMLKKHIR-THT 25
>d1m1nb_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta
chain {Azotobacter vinelandii [TaxId: 354]}
Length = 522
Score = 26.6 bits (58), Expect = 8.7
Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 10/96 (10%)
Query: 349 YVCETCGASFVQWGSLNQHNLVHTAVNVVCSYCGNTYKNPKSLESHIRYAHTIRQKSICD 408
C+ GA G VH + C +Y H R + S+ +
Sbjct: 67 KACQPLGAVLCALGFEKTMPYVHGSQG--CVAYFRSY-----FNRHFREPVSCVSDSMTE 119
Query: 409 ---VCGKEFKMKKRLKEHMAVHTTDRPFVCDMCPSA 441
V G + MK L+ A + D V C +
Sbjct: 120 DAAVFGGQQNMKDGLQNCKATYKPDMIAVSTTCMAE 155
>d1oqca_ a.24.15.1 (A:) Augmenter of liver regeneration {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 112
Score = 25.4 bits (55), Expect = 9.0
Identities = 10/85 (11%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 192 DNCNNLWSHMFIKHENSDFVCNLCPSHSKVLVRYVHSAVRHMKKHHKLQLSIPKAHNYFR 251
D + + C ++ + + + + + + HN
Sbjct: 27 DMPTPEQQQDMAQFIHIFSKFYPCEECAEDIRKRIDRSQPDTSTRVSFSQWLCRLHN--- 83
Query: 252 KKTVIHVNKKVNYKCPDCSAILLSY 276
VN+K+ DCS + +
Sbjct: 84 -----EVNRKLGKPDFDCSRVDERW 103
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.1 bits (49), Expect = 9.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 294 CHICKKVFLRYRNLVCHIKAVHE 316
C C K F R N+ H+K +H+
Sbjct: 4 CPFCFKEFTRKDNMTAHVKIIHK 26
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.135 0.454
Gapped
Lambda K H
0.267 0.0571 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,823,141
Number of extensions: 91917
Number of successful extensions: 1008
Number of sequences better than 10.0: 1
Number of HSP's gapped: 972
Number of HSP's successfully gapped: 285
Length of query: 459
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 371
Effective length of database: 1,199,356
Effective search space: 444961076
Effective search space used: 444961076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 54 (24.9 bits)