RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11589
(262 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 42.7 bits (101), Expect = 7e-07
Identities = 10/33 (30%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 124 HQCSVCGKAFADITNMKVHMR-IHTGEKKYVCE 155
+ C CGK F+ ++ H++ +HT E+ + C+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 33.4 bits (77), Expect = 0.001
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 210 CDVCGKEFRMKRQLKEHM-AVHTTDRPFVCNM 240
C CGK F L H+ VHT++RP C +
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 32.7 bits (75), Expect = 0.003
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 91 VEKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSV 128
V K Y C C K F R +L HIK VH + R H+C V
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 27.3 bits (61), Expect = 0.22
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 231 TTDRPFVCNMCPSTFKLKKHLRQHYK 256
+ +P++C C F HL H K
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIK 26
Score = 26.1 bits (58), Expect = 0.53
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 147 TGEKKYVCETCGASFALWGSLNVH 170
+ K Y+C++CG F+ LN H
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGH 24
Score = 26.1 bits (58), Expect = 0.57
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 179 FVCSYCGNTYKNPKALTSHIRNSHTIHQKSICDV 212
++C CG + P L HI+ HT + C V
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 42.2 bits (100), Expect = 9e-07
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEK 150
R C VC +AFA ++K H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.1 bits (66), Expect = 0.035
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C+VC + F + LK H HT
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHT 26
Score = 28.0 bits (63), Expect = 0.088
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 234 RPFVCNMCPSTFKLKKHLRQHYKVH 258
R FVC +C F ++HL++HY+ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 26.8 bits (60), Expect = 0.29
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 150 KKYVCETCGASFALWGSLNVHSYSHT 175
+ +VCE C +FA L H SHT
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHT 26
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 42.0 bits (99), Expect = 1e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 126 CSVCGKAFADITNMKVHMRIHTGEKKYVCE 155
CGK+F ++K HM++H+ + Y+CE
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 32.4 bits (74), Expect = 0.003
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPFVC 238
CGK F K+ LKEHM +H+ R ++C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 41.8 bits (99), Expect = 1e-06
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
+H + + C CGKAF+ + + H R+HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 38.4 bits (90), Expect = 2e-05
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 145 IHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
IH+GEK Y C CG +F+ L H HT
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 33.4 bits (77), Expect = 0.001
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
+H+ ++P+ C C F L QH +VH
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 29.5 bits (67), Expect = 0.027
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C CGK F L +H VHT
Sbjct: 10 CVECGKAFSRSSILVQHQRVHT 31
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.0 bits (94), Expect = 7e-06
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQF 179
R HTGEK Y C C +F L++H + + F
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 36.6 bits (85), Expect = 1e-04
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
H + + CS C K F + +H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 31.6 bits (72), Expect = 0.005
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
HT ++P+ C+ C TF+ K+ L H+K +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 27.7 bits (62), Expect = 0.13
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
HT + C C K FR K+ L H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 26.9 bits (60), Expect = 0.30
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 88 IHNVEKEYCCHICKKVFLRNRNLVCHIKAVHE 119
H EK Y C C K F + + L H K H+
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 38.5 bits (90), Expect = 2e-05
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEK 150
C C K F ++ H++ H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 28.1 bits (63), Expect = 0.11
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C C K F L +H+ H
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQ 26
Score = 25.8 bits (57), Expect = 0.59
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 150 KKYVCETCGASFALWGSLNVHSYSHT 175
KK+ C C F L+ H +H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQ 26
Score = 25.8 bits (57), Expect = 0.68
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 234 RPFVCNMCPSTFKLKKHLRQHYKVH 258
+ F C CP F HL +H K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 39.0 bits (91), Expect = 2e-05
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
++Y C+ CG SF+ L+ H +HT
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
Score = 34.0 bits (78), Expect = 8e-04
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
R + C+ C +F L +H + H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 34.0 bits (78), Expect = 0.001
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 115 KAVHENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
+ R ++C CGK+F+ +++ H R HTGE
Sbjct: 4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 25.1 bits (55), Expect = 1.5
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 201 SHTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
++ CD CGK F L +H HT
Sbjct: 6 QQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 38.0 bits (89), Expect = 3e-05
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 124 HQCSVCGKAFADITNMKVHMRIHTG 148
QC +C + F+ ++ H+R HTG
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 29.1 bits (66), Expect = 0.045
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C +C + F L H+ HT
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHT 27
Score = 28.3 bits (64), Expect = 0.072
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 149 EKKYVCETCGASFALWGSLNVHSYSHT 175
+K + C C +F+ L H +HT
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 27.2 bits (61), Expect = 0.17
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 234 RPFVCNMCPSTFKLKKHLRQHYKVH 258
+PF C +C F HL H + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 37.7 bits (88), Expect = 4e-05
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 144 RIHTGEKKYVCETCGASFALWGSLNVHSYSHT 175
R H+GEK Y C C A F G++ +H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 32.6 bits (75), Expect = 0.003
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 117 VHENVREHQCSVCGKAFADITNMKVH-MRIHTGE 149
H + ++C +C F MK+H ++ HT
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 29.6 bits (67), Expect = 0.034
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 88 IHNVEKEYCCHICKKVFLRNRNLVCHIKAVH 118
H+ EK Y C+IC F ++ + HI H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 29.2 bits (66), Expect = 0.047
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 229 VHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
H+ ++P+ C +C + F ++ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 27.6 bits (62), Expect = 0.18
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHTTD 233
H+ + C +C F +K H+ T+
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 37.7 bits (88), Expect = 4e-05
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGEK 150
R C+ CGK F ++ H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.4 bits (56), Expect = 0.93
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 213 CGKEFRMKRQLKEHMAVHT 231
CGK F +L+ H HT
Sbjct: 10 CGKRFTRSDELQRHKRTHT 28
Score = 23.8 bits (52), Expect = 3.2
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 234 RPFVCNM--CPSTFKLKKHLRQHYKVH 258
RPF+C C F L++H + H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 37.8 bits (88), Expect = 4e-05
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 142 HMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTN 176
R TG K + C C SF+ L +H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 35.5 bits (82), Expect = 2e-04
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 226 HMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKM 261
T +PF C C +F HL H K H+ +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 29.7 bits (67), Expect = 0.028
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 117 VHENVREHQCSVCGKAFADITNMKVHMRIHTG 148
++ QC C ++F+ ++ +H + H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 25.1 bits (55), Expect = 1.3
Identities = 8/35 (22%), Positives = 10/35 (28%), Gaps = 1/35 (2%)
Query: 197 HIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
R T + C C + F L H H
Sbjct: 2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 25.1 bits (55), Expect = 1.4
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 85 HLDIHNVEKEYCCHICKKVFLRNRNLVCHIK 115
K + C C + F R+ +L H K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 37.2 bits (86), Expect = 7e-05
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 105 LRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIHTGEK 150
L ++ ++K + + E C K F N++ H++ H ++
Sbjct: 2 LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.7 bits (64), Expect = 0.089
Identities = 6/36 (16%), Positives = 12/36 (33%), Gaps = 2/36 (5%)
Query: 142 HMRIHTGEKKYVCETCGA--SFALWGSLNVHSYSHT 175
+K + C G +F ++ H +H
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL 44
Score = 24.5 bits (53), Expect = 2.6
Identities = 7/44 (15%), Positives = 19/44 (43%)
Query: 191 PKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVHTTDR 234
++ +++ + + C K F+ + ++ H+ H DR
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 37.4 bits (86), Expect = 9e-05
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 92 EKEYCCHICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNMKVHMRIH 146
+K Y C C K F H+ +H +R + C VCGK F ++ HM+IH
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 36.6 bits (84), Expect = 1e-04
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 213 CGKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
CGK F K Q HM++H RP+ C +C FK+K HL H K+H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 34.3 bits (78), Expect = 0.001
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 129 CGKAFADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSH 174
CGK+F + HM +H G + Y C CG F + L H H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 30.4 bits (68), Expect = 0.026
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 184 CGNTYKNPKALTSHIRNSHTIHQKSICDVCGKEFRMKRQLKEHMAVH 230
CG ++ + H+ + C VCGK+F+MK L HM +H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPY-GCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.9 bits (64), Expect = 0.081
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 149 EKKYVCETCGASFALWGSLNVH-SYSHTNTQFVCSYCGNTYKNPKALTSHIR 199
+K Y C+ CG SF + H S + C CG +K L H++
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 25.0 bits (54), Expect = 2.2
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 67 YKCPDCSVIVVSYSGFKSHLDIHNVEKEYCCHICKKVFLRNRNLVCHIK 115
Y C C S H+ +H + Y C +C K F +LV H+K
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 36.2 bits (84), Expect = 1e-04
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGE 149
+ H+C+ C K+++ + N+K H+R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 25.4 bits (56), Expect = 0.95
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 213 CGKEFRMKRQLKEHMAVHT 231
C K + LK H+ HT
Sbjct: 10 CRKSYSRLENLKTHLRSHT 28
Score = 24.2 bits (53), Expect = 2.0
Identities = 6/27 (22%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 234 RPFVCN--MCPSTFKLKKHLRQHYKVH 258
+P C C ++ ++L+ H + H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 34.3 bits (79), Expect = 5e-04
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 146 HTGEKKYVCETCGASFALWGSLNVHSYSHTNT 177
+G++ +VC C ++F + H HT+T
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 34.0 bits (78), Expect = 0.001
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 118 HENVREHQCSVCGKAFADITNMKVHMRIHTGE 149
R C +C AF N H+++HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 29.3 bits (66), Expect = 0.040
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 230 HTTDRPFVCNMCPSTFKLKKHLRQHYKVH 258
+ RPFVC +C S F K + +H KVH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 27.8 bits (62), Expect = 0.14
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 202 HTIHQKSICDVCGKEFRMKRQLKEHMAVHT 231
+ + +C +C F K H+ VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 23.9 bits (52), Expect = 3.0
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 89 HNVEKEYCCHICKKVFLRNRNLVCHIK 115
+ ++ + C IC F N H+K
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 32.7 bits (75), Expect = 0.002
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGE 149
+ QC+ CGK F+ N++ H+RIHTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 23.5 bits (51), Expect = 4.5
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 234 RPFVCN--MCPSTFKLKKHLRQHYKVH 258
+PF C C F L +LR H ++H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
Score = 23.1 bits (50), Expect = 5.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 213 CGKEFRMKRQLKEHMAVHT 231
CGK F + L+ H+ +HT
Sbjct: 10 CGKRFSLDFNLRTHVRIHT 28
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 32.3 bits (73), Expect = 0.003
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGE 149
R H C+ CGKAF + + +K H +HTGE
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 24.2 bits (52), Expect = 2.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 209 ICDVCGKEFRMKRQLKEHMAVHT 231
+C CGK F +LK H VHT
Sbjct: 4 VCAECGKAFVESSKLKRHQLVHT 26
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 32.3 bits (74), Expect = 0.003
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTG 148
R + C V C + F+ ++ H+RIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 24.6 bits (54), Expect = 1.6
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 234 RPFVCN--MCPSTFKLKKHLRQHYKVH 258
RP+ C C F L +H ++H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 23.8 bits (52), Expect = 3.4
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 213 CGKEFRMKRQLKEHMAVHT 231
C + F L H+ +HT
Sbjct: 10 CDRRFSRSADLTRHIRIHT 28
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 32.3 bits (74), Expect = 0.003
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHTGE 149
R + C C KAF ++ H + H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 25.4 bits (56), Expect = 0.99
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 233 DRPFVCN--MCPSTFKLKKHLRQHYKVHLK 260
DRP+ C+ C F L +H K H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 23.4 bits (51), Expect = 4.4
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 2/29 (6%)
Query: 149 EKKYVC--ETCGASFALWGSLNVHSYSHT 175
++ Y C C +F L H SH
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 22.7 bits (49), Expect = 9.0
Identities = 6/19 (31%), Positives = 6/19 (31%)
Query: 213 CGKEFRMKRQLKEHMAVHT 231
C K F L H H
Sbjct: 11 CDKAFVRNHDLIRHKKSHQ 29
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 31.8 bits (73), Expect = 0.004
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 124 HQCSVCGKAFADITNMKVHMRIHT 147
++C CGKAF+ + + H RIHT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 26.4 bits (59), Expect = 0.34
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 234 RPFVCNMCPSTFKLKKHLRQHYKVH 258
+P+ C C F L H ++H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 26.4 bits (59), Expect = 0.39
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C CGK F L H +HT
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
Score = 23.3 bits (51), Expect = 4.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 150 KKYVCETCGASFALWGSLNVHSYSHT 175
K Y C CG +F+ L H HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 31.6 bits (71), Expect = 0.005
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEKKY 152
++ C +CGK F D+ ++ H H+GEK Y
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.2 bits (57), Expect = 0.57
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDRPF 236
C++CGK FR L H H+ ++P+
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 29.3 bits (65), Expect = 0.032
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 124 HQCSVCGKAFADITNMKVHMRIHTG 148
H+C VCGK F+ +K HMR HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.3 bits (52), Expect = 2.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C+VCGK F K +LK HM HT
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHT 25
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.2 bits (66), Expect = 0.037
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 122 REHQCSV--CGKAFADITNMKVHMRIHT 147
R + C C K FA TN+K H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 22.7 bits (49), Expect = 6.7
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 234 RPFVCN--MCPSTFKLKKHLRQHYKVH 258
RP+VC C F +L+ H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 30.1 bits (68), Expect = 0.039
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Query: 139 MKVHMRIHTGEKKYVCETCGASFALWGSLNV-HSYSHTNTQFVCSYCG 185
++ R T + C C ++F L + F C++C
Sbjct: 2 IETDERDSTNRASFKCPVCSSTFT---DLEANQLFDPMTGTFRCTFCH 46
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.4 bits (61), Expect = 0.22
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHTTDR 234
C C +EFR + L HM VH DR
Sbjct: 8 CSFCKREFRSAQALGGHMNVHRRDR 32
Score = 26.2 bits (58), Expect = 0.50
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGEK 150
R + CS C + F + HM +H ++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 22.7 bits (49), Expect = 8.0
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 178 QFVCSYCGNTYKNPKALTSHIRNSH 202
+ CS+C +++ +AL H N H
Sbjct: 5 SYTCSFCKREFRSAQALGGH-MNVH 28
>d1m1nb_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta
chain {Azotobacter vinelandii [TaxId: 354]}
Length = 522
Score = 29.7 bits (66), Expect = 0.44
Identities = 19/96 (19%), Positives = 29/96 (30%), Gaps = 10/96 (10%)
Query: 152 YVCETCGASFALWGSLNVHSYSHTN---TQFVCSYCGNTYKNPKALTSHIRNSHTIHQKS 208
C+ GA G Y H + + SY ++ P + S
Sbjct: 67 KACQPLGAVLCALGFEKTMPYVHGSQGCVAYFRSYFNRHFREPVSCVSDSMTEDAA---- 122
Query: 209 ICDVCGKEFRMKRQLKEHMAVHTTDRPFVCNMCPST 244
V G + MK L+ A + D V C +
Sbjct: 123 ---VFGGQQNMKDGLQNCKATYKPDMIAVSTTCMAE 155
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 26.2 bits (58), Expect = 0.44
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 126 CSVCGKAFADITNMKVHMRIHTGE 149
CS + F + VHMR HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 26.5 bits (58), Expect = 0.51
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHTT 232
C +CGK F +L++H A H
Sbjct: 9 CGLCGKVFTDANRLRQHEAQHGV 31
Score = 25.3 bits (55), Expect = 1.7
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 126 CSVCGKAFADITNMKVHMRIH 146
C +CGK F D ++ H H
Sbjct: 9 CGLCGKVFTDANRLRQHEAQH 29
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 25.9 bits (57), Expect = 0.60
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 233 DRPFVCNMCPSTFKLKKHLRQHYKVHLK 260
++PF C++C F ++H K+HL+
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHLR 28
Score = 24.4 bits (53), Expect = 1.9
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIH 146
+ C +CG+ FA K H +IH
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 23.6 bits (51), Expect = 3.7
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 209 ICDVCGKEFRMKRQLKEHMAVH 230
CD+CG++F + K H +H
Sbjct: 5 ACDICGRKFARSDERKRHTKIH 26
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.8 bits (56), Expect = 0.63
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 125 QCSVCGKAFADITNMKVHMRIHTGEK 150
+C C K F +KVH R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2fiya1 e.59.1.1 (A:19-308) FdhE homolog PA4809 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 290
Score = 28.3 bits (63), Expect = 0.80
Identities = 19/123 (15%), Positives = 29/123 (23%), Gaps = 29/123 (23%)
Query: 115 KAVHENVREHQCSVCGKA--FADITNMKVHMRIHTGEKKYVCETCGASFALWGSLNVHSY 172
AV E C CG I TG + C C +
Sbjct: 156 GAVVETESRTLCPACGSPPMAGMIRQGGKE----TGLRYLSCSLCA-----------CEW 200
Query: 173 SHTNTQFVCSYCGNTYKNPKALTSHI------RNSHTIHQKSICDVCGKEFRMKRQLKEH 226
+ + CS+C + K L + + C C + +
Sbjct: 201 HYVRIK--CSHCEES----KHLAYLSLEHDGQPAEKAVLRAETCPSCQGYLKQFYLEFDR 254
Query: 227 MAV 229
A
Sbjct: 255 HAD 257
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.4 bits (55), Expect = 0.83
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 122 REHQCSVCGKAFADITNMKVHMRIHTGE 149
R +C +C A + + + VH+R HTG+
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 24.7 bits (53), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 126 CSVCGKAFADITNMKVHMRIHTGE 149
CSVC + F +++HM HTGE
Sbjct: 7 CSVCQETFRRRMELRLHMVSHTGE 30
Score = 23.9 bits (51), Expect = 2.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 232 TDRPFVCNMCPSTFKLKKHLRQHYKVH 258
+++ F C++C TF+ + LR H H
Sbjct: 1 SEQVFTCSVCQETFRRRMELRLHMVSH 27
Score = 23.2 bits (49), Expect = 5.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 210 CDVCGKEFRMKRQLKEHMAVHT 231
C VC + FR + +L+ HM HT
Sbjct: 7 CSVCQETFRRRMELRLHMVSHT 28
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 24.6 bits (53), Expect = 1.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 95 YCCHICKKVFLRNRNLVCHIKAVHE 119
Y C C K F R N+ H+K +H+
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIHK 26
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.4 bits (56), Expect = 2.0
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 178 QFVCSYCGNTYKNPKALTSHIR 199
C C + + L +H R
Sbjct: 15 LHRCLACARYFIDSTNLKTHFR 36
Score = 25.0 bits (55), Expect = 3.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 123 EHQCSVCGKAFADITNMKVHMR 144
H+C C + F D TN+K H R
Sbjct: 15 LHRCLACARYFIDSTNLKTHFR 36
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.0 bits (51), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 121 VREHQCSVCGKAFADITNMKVHMRIHT 147
V+ ++C C A AD +++ H+RIH+
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIHS 27
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 24.1 bits (52), Expect = 2.6
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 178 QFVCSYCGNTYKNPKALTSHIRNSHT 203
+++C CG K P L HIR +HT
Sbjct: 1 KYICEECGIRAKKPSMLKKHIR-THT 25
>d2p41a1 c.66.1.25 (A:8-264) An RNA cap
(nucleoside-2'-O-)-methyltransferase domain of RNA
polymerase NS5 {Dengue virus 2 [TaxId: 11060]}
Length = 257
Score = 26.4 bits (58), Expect = 3.7
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Query: 3 IKHENSDFVCN-LCPPGSKVVVKYVHYLERHVRKHHTMFLRLP 44
N+ F L P S V+ +E RKH +R P
Sbjct: 164 WLSNNTQFCVKVLNPYMSSVI----EKMEALQRKHGGALVRNP 202
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 26.0 bits (57), Expect = 4.0
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 124 HQCSVCGKAFADITNMKVHMRIHTGEK 150
++C CGK + DI N++ H+R H G K
Sbjct: 147 YKCEECGK-YVDIENLEAHLREH-GIK 171
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 23.9 bits (51), Expect = 4.1
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 177 TQFVCSYCGNTYKNPKALTSHIRN 200
FVCS CG T+ + H N
Sbjct: 3 AAFVCSKCGKTFTRRNTMARHADN 26
>d1nz8a_ d.58.42.1 (A:) N-utilization substance G protein NusG,
N-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 119
Score = 25.4 bits (55), Expect = 4.3
Identities = 7/49 (14%), Positives = 17/49 (34%)
Query: 214 GKEFRMKRQLKEHMAVHTTDRPFVCNMCPSTFKLKKHLRQHYKVHLKME 262
G+E + K L++ + + P+ ++ +V K
Sbjct: 12 GQEEKAKANLEKRIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKL 60
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 23.7 bits (51), Expect = 4.6
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 233 DRPFVCNM--CPSTFKLKKHLRQHYKVH 258
D+PF+C C F + HL H H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga
maritima [TaxId: 2336]}
Length = 171
Score = 25.5 bits (55), Expect = 5.1
Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 4/77 (5%)
Query: 6 ENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFR----KKNAIHVNNI 61
++DFV N G ++ V + + + + + S + + +I
Sbjct: 75 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDI 134
Query: 62 NKKVSYKCPDCSVIVVS 78
+K+ P + +
Sbjct: 135 ARKIEKLSPKAWYLQAA 151
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 23.0 bits (49), Expect = 5.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 179 FVCSYCGNTYKNPKALTSHIRNSH 202
F C+YC K P L+ H++ H
Sbjct: 3 FKCNYCSFDTKQPSNLSKHMKKFH 26
>d1qypa_ g.41.3.1 (A:) RBP9 subunit of RNA polymerase II {Archaeon
Thermococcus celer [TaxId: 2264]}
Length = 57
Score = 23.6 bits (51), Expect = 6.2
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 151 KYVCETCGASFALWGSLNVHSYSHTNTQF-VCSYCGNTYKN 190
K C CG A W + + +T F C+ CG+T+++
Sbjct: 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS 55
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga
maritima [TaxId: 2336]}
Length = 162
Score = 25.0 bits (54), Expect = 7.2
Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 6 ENSDFVCNLCPPGSKVVVKYVHYLERHVRKHHTMFLRLPKVHSHFRKKNAIHVNNINKKV 65
++ +V PG K E K+ + V A +
Sbjct: 70 VDAKYVIFQFRPGGL---KGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDT 126
Query: 66 SYKCPDCSVIVVS 78
K + +++ +
Sbjct: 127 VRKTSNATIVNFT 139
>d2ghfa1 g.37.1.1 (A:45-102) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 23.7 bits (51), Expect = 7.4
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 176 NTQFVCSYCGNTYKNPKALTSHIRNSH 202
N+ +VC C K AL+ H H
Sbjct: 4 NSSYVCVECNFLTKRYDALSEHNLKYH 30
>d1hk8a_ c.7.1.3 (A:) Class III anaerobic ribonucleotide reductase
NRDD subunit {Bacteriophage T4 [TaxId: 10665]}
Length = 561
Score = 25.3 bits (55), Expect = 8.5
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 9/35 (25%)
Query: 153 VCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNT 187
C TCG + H + T FVCS CG T
Sbjct: 517 KCFTCG---------STHEMTPTENGFVCSICGET 542
>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 182
Score = 24.8 bits (53), Expect = 9.8
Identities = 15/116 (12%), Positives = 34/116 (29%), Gaps = 3/116 (2%)
Query: 82 FKSHLDIHNVEKEYCC--HICKKVFLRNRNLVCHIKAVHENVREHQCSVCGKAFADITNM 139
FK L ++ C K+ + + L + V + + + +
Sbjct: 22 FKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIV-RGDFDENLNYPEQKVVTVGQF 80
Query: 140 KVHMRIHTGEKKYVCETCGASFALWGSLNVHSYSHTNTQFVCSYCGNTYKNPKALT 195
K+ + + A +++ HT+ + Y NP + T
Sbjct: 81 KIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSAT 136
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.135 0.445
Gapped
Lambda K H
0.267 0.0426 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,041,899
Number of extensions: 50079
Number of successful extensions: 686
Number of sequences better than 10.0: 1
Number of HSP's gapped: 669
Number of HSP's successfully gapped: 263
Length of query: 262
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 178
Effective length of database: 1,254,276
Effective search space: 223261128
Effective search space used: 223261128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 52 (24.6 bits)