RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11590
(555 letters)
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 39.3 bits (92), Expect = 2e-05
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKF 439
HT EK Y C C F K L H + + F
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 35.0 bits (81), Expect = 8e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKF 231
HT EK Y C C +F L+ H + D F
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 31.6 bits (72), Expect = 0.013
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 490 VHSTERPFVCKLCGIAYKWRKNLVRHQK 517
H+ E+P+ C C ++ ++ L H K
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFK 29
Score = 27.7 bits (62), Expect = 0.28
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 7/33 (21%)
Query: 175 IHSGEKDFSCHI-------NSNLSEHIRMHHTE 200
H+GEK ++C L H + +H
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 24.6 bits (54), Expect = 3.7
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 433 THSNVK-FKCDFCEKVYSHRNRLRYHISTVHENKW 466
TH+ K + C C+K + + L H H+ +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36
Score = 23.5 bits (51), Expect = 8.9
Identities = 4/24 (16%), Positives = 8/24 (33%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTE 494
C C + F + + H +
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDP 34
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 38.4 bits (90), Expect = 4e-05
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
IH+ EK Y C CG F S LV H H+
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 33.7 bits (78), Expect = 0.002
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
H+ EK Y C CG +F S L H+ H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 33.4 bits (77), Expect = 0.003
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 490 VHSTERPFVCKLCGIAYKWRKNLVRHQK 517
+HS E+P+ C CG A+ LV+HQ+
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQR 28
Score = 26.4 bits (59), Expect = 0.88
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 7/33 (21%)
Query: 175 IHSGEKDFSCHI-------NSNLSEHIRMHHTE 200
IHSGEK + C +S L +H R+H E
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 24.1 bits (53), Expect = 4.7
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGE 179
Y C +C L H +H+GE
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 23.7 bits (52), Expect = 6.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTE 494
C CG+ F S + +H VH+ E
Sbjct: 10 CVECGKAFSRSSILVQHQRVHTGE 33
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 35.9 bits (83), Expect = 4e-04
Identities = 9/36 (25%), Positives = 10/36 (27%)
Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNV 437
T K + C C F L H H V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 31.2 bits (71), Expect = 0.018
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 193 HIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
R T K + C C SF L H+ H
Sbjct: 2 STRGS-TGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.9 bits (70), Expect = 0.022
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 487 HAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
+ +PF C C ++ +L H+K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 25.5 bits (56), Expect = 1.8
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 7/33 (21%)
Query: 172 HLDIHSGEKDFSCHI-------NSNLSEHIRMH 197
+G K F C + +L+ H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.1 bits (55), Expect = 2.4
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 430 HTTTHSNVK-FKCDFCEKVYSHRNRLRYHIST 460
T + +K F+C C++ +S + L H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 35.9 bits (83), Expect = 4e-04
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 402 HFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHS 435
++Y C+ CG F H S L H TH+
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36
Score = 32.4 bits (74), Expect = 0.007
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 486 KHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
+ R + C CG ++ +L +H++
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33
Score = 30.9 bits (70), Expect = 0.022
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
E ++Y C+ CG SF S L+ H+ +H
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 26.3 bits (58), Expect = 1.2
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 7/36 (19%)
Query: 172 HLDIHSGEKDFSCHI-------NSNLSEHIRMHHTE 200
+ + C +S+LS+H R H E
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 34.2 bits (79), Expect = 0.001
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 405 IHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
H+ EK Y C +C A F ++ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 32.3 bits (74), Expect = 0.007
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
H+ EK Y C +C F ++ H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 30.3 bits (69), Expect = 0.039
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 7/34 (20%)
Query: 175 IHSGEKDFSCHI-------NSNLSEHIRMHHTEE 201
HSGEK + C+I + + HI HTE
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 29.6 bits (67), Expect = 0.068
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 490 VHSTERPFVCKLCGIAYKWRKNLVRHQK 517
HS E+P+ C +C + + H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHIL 29
Score = 26.9 bits (60), Expect = 0.61
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 433 THSNVK-FKCDFCEKVYSHRNRLRYHISTVH 462
THS K ++C C ++ ++ HI H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 24.6 bits (54), Expect = 4.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTE 494
C IC F S MK H TE
Sbjct: 11 CYICHARFTQSGTMKMHILQKHTE 34
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 33.1 bits (75), Expect = 0.004
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 467 KSAACDICGRVFLDSKNMKKHAAVHSTERPF 497
K AC+ICG++F D ++ +H HS E+P+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.2 bits (57), Expect = 1.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 202 KKYICEVCGTSFLTWSSLNSHKYSHDDRK 230
K+ CE+CG F LN HK SH K
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEK 32
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 31.9 bits (73), Expect = 0.009
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 407 TSEKKYVCELCGAYFIHKSSLVAHT-TTHSNVK-FKCD 442
+ K Y+C+ CG F L H H++ + KC
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 31.9 bits (73), Expect = 0.011
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
Query: 177 SGEKDFSCHI-------NSNLSEHIRMHHTEEKKYICEV 208
S K + C +L+ HI+ HT E+ + C+V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 30.0 bits (68), Expect = 0.054
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 471 CDICGRVFLDSKNMKKHA-AVHSTERPFVCKL 501
C CG+ F ++ H VH++ERP C++
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 29.2 bits (66), Expect = 0.097
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 492 STERPFVCKLCGIAYKWRKNLVRHQK 517
S +P++C+ CG + +L H K
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIK 26
Score = 27.7 bits (62), Expect = 0.34
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 384 YQCPHCPSLLKTFWTLKEHF-NIHTSEKKYVCEL 416
Y C C L H +HTSE+ + C++
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 27.3 bits (61), Expect = 0.53
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 154 YKCPDCPAILQTFKNLKCHL-DIHSGEKDFSCHI 186
Y C C +L H+ +H+ E+ C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 26.5 bits (59), Expect = 0.89
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 199 TEEKKYICEVCGTSFLTWSSLNSH 222
+ K YIC+ CG F LN H
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGH 24
Score = 25.0 bits (55), Expect = 3.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 439 FKCDFCEKVYSHRNRLRYHISTVH 462
+ C C K +S + L HI VH
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVH 29
Score = 25.0 bits (55), Expect = 3.1
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 228 DRKFSCSHCGNSYKNPIFLKRHFRESH 254
+ + C CG + P L H ++ H
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVH 29
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 30.7 bits (70), Expect = 0.020
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 409 EKKYVCELCGAYFIHKSSLVAHTTTHS 435
+K + C +C F L H TH+
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHT 27
Score = 29.5 bits (67), Expect = 0.061
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 494 ERPFVCKLCGIAYKWRKNLVRHQK 517
++PF C++C + +L H +
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIR 24
Score = 28.3 bits (64), Expect = 0.15
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 201 EKKYICEVCGTSFLTWSSLNSHKYSH 226
+K + C +C +F L +H +H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 30.9 bits (70), Expect = 0.022
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 406 HTSEKKYVCELCGAYFIHKSSLVAHTTTHSN 436
+ ++ +VC +C + F K++ H H++
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 29.7 bits (67), Expect = 0.062
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 491 HSTERPFVCKLCGIAYKWRKNLVRHQK 517
S +RPFVC++C A+ + N RH K
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
Score = 28.6 bits (64), Expect = 0.17
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 198 HTEEKKYICEVCGTSFLTWSSLNSHKYSHDD 228
+ ++ ++C +C ++F T ++ H H D
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 30.8 bits (69), Expect = 0.039
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 409 EKKYVCELCGAYFIHKSSLVAH-TTTHSNVKFKCDFCEKVYSHRNRLRYHIST 460
+K Y C+ CG F HKS H + + C C K + ++ L H+
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52
Score = 30.4 bits (68), Expect = 0.057
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 474 CGRVFLDSKNMKKHAAVHSTERPFVCKLCGIAYKWRKNLVRHQK 517
CG+ F +H ++H RP+ C +CG +K + +LV H K
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 30.0 bits (67), Expect = 0.074
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 201 EKKYICEVCGTSFLTWSSLNSH-KYSHDDRKFSCSHCGNSYKNPIFLKRHFR 251
+K Y C+ CG SF S + H R + C CG +K L H +
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 27.3 bits (60), Expect = 0.59
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 439 FKCDFCEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMKKHAAVH 491
+ C C K ++H+++ H+S + C +CG+ F ++ H +H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG--CGVCGKKFKMKHHLVGHMKIH 53
Score = 27.3 bits (60), Expect = 0.64
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTH 434
Y C C H ++H + Y C +CG F K LV H H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 25.0 bits (54), Expect = 4.8
Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 181 DFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSH 226
S S H+ MH + Y C VCG F L H H
Sbjct: 9 GKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIH 53
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 30.3 bits (68), Expect = 0.050
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 471 CDICGRVFLDSKNMKKHAAVHST 493
C +CG+VF D+ +++H A H
Sbjct: 9 CGLCGKVFTDANRLRQHEAQHGV 31
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 29.2 bits (66), Expect = 0.073
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 410 KKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
KK+ C C F+ L H TH N K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 26.2 bits (58), Expect = 1.0
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 202 KKYICEVCGTSFLTWSSLNSHKYSH 226
KK+ C C F+ L+ H +H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
Score = 25.4 bits (56), Expect = 1.8
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 495 RPFVCKLCGIAYKWRKNLVRHQK 517
+ F C C + +L +H K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK 23
Score = 25.4 bits (56), Expect = 2.0
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEK 180
+ CP+CP +L H+ H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 24.2 bits (53), Expect = 5.1
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEK 410
+ CP CP L +H H ++K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 29.1 bits (66), Expect = 0.085
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 410 KKYVCELCGAYFIHKSSLVAHTTTHSNVK 438
+ +VCE+C F + L H +H+N K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 27.2 bits (61), Expect = 0.35
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 495 RPFVCKLCGIAYKWRKNLVRHQK 517
R FVC++C A+ +++L RH +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
Score = 26.4 bits (59), Expect = 0.70
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 202 KKYICEVCGTSFLTWSSLNSHKYSH 226
+ ++CEVC +F L H SH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 25.7 bits (57), Expect = 1.5
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEK 180
+ C C ++LK H H+ EK
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 24.1 bits (53), Expect = 4.5
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEK 410
+ C C LK H+ HT+EK
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 23.4 bits (51), Expect = 9.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTER 495
C++C R F +++K+H H+ E+
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEK 29
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 28.9 bits (65), Expect = 0.099
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTERPFVCK 500
CG+ F K++K+H +HS R ++C+
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 26.6 bits (59), Expect = 0.69
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 412 YVCE--LCGAYFIHKSSLVAHTTTHSNVK-FKCDF 443
+ C CG F K L H HS+ + + C+F
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 26.2 bits (58), Expect = 1.2
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 384 YQCPH--CPSLLKTFWTLKEHFNIHTSEKKYVCE 415
+ CP C LKEH +H+ + Y+CE
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 24.7 bits (54), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 154 YKC--PDCPAILQTFKNLKCHLDIHSGEKDFSC 184
+ C P C K+LK H+ +HS +D+ C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 232
Score = 32.0 bits (72), Expect = 0.13
Identities = 13/115 (11%), Positives = 36/115 (31%), Gaps = 5/115 (4%)
Query: 312 CDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKP----DDSENKISKVAEKQYW 367
D+ + D ++ + +++ + P D++ + +
Sbjct: 114 IDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNAHANTFNIMKWAVD 173
Query: 368 KDVEEKCRIIVEDTMRYQCPHCPSLLKTFW-TLKEHFNIHTSEKKYVCELCGAYF 421
+EE I+ED + Y + P L + ++ ++ +L
Sbjct: 174 HLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDMLYANASSQLDRGVL 228
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 27.6 bits (62), Expect = 0.27
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 410 KKYVCELCGAYFIHKSSLVAHTTTHS 435
K Y C CG F S L+ H H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 27.6 bits (62), Expect = 0.31
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 495 RPFVCKLCGIAYKWRKNLVRHQK 517
+P+ C CG A+ L+ HQ+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQR 23
Score = 24.5 bits (54), Expect = 3.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 202 KKYICEVCGTSFLTWSSLNSHKYSH 226
K Y C CG +F S L +H+ H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 27.6 bits (61), Expect = 0.53
Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 188 SNLSEHIRMHHTEEKKYICEVC--GTSFLTWSSLNSHKYSH 226
++ ++++ +K + C +F ++ SH +H
Sbjct: 5 GSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 26.0 bits (57), Expect = 1.7
Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 401 EHFNIHTSEKKYVCELCGA--YFIHKSSLVAHTTTHSNVK 438
+ + +K + C G F + ++ +H TH +
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 26.7 bits (59), Expect = 0.59
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 467 KSAACDICGRVFLDSKNMKKHAAVH 491
K ACDICGR F S K+H +H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 27.7 bits (61), Expect = 0.68
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 380 DTMRYQCPHCPSLLKTFWTLKEHFNIHTSE 409
YQC HC S L++ L H NIH E
Sbjct: 15 QNSTYQCKHCDSKLQSTAELTSHLNIHNEE 44
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 27.0 bits (59), Expect = 0.69
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 495 RPFVCKLCGIAYKWRKNLVRHQKNCKASAKCS 526
+P+ C +C + WR + RH +C S + +
Sbjct: 4 KPYECNICAKRFMWRDSFHRHVTSCTKSYEAA 35
>d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus
thermophilus [TaxId: 274]}
Length = 174
Score = 29.1 bits (65), Expect = 0.95
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 7/79 (8%)
Query: 310 NECDQHMECHTCNECDSKHNDCQSLWD---HVFSEHKNMLAFSKPDDSENKISKVAEKQY 366
D + D + + Q + D V E ++ K E K K +
Sbjct: 99 KGGDAKVIG--VVAEDQRLDHIQDIGDVPEGVKQEIQHFFETYK--ALEAKKGKWVKVTG 154
Query: 367 WKDVEEKCRIIVEDTMRYQ 385
W+D + + RY+
Sbjct: 155 WRDRKAALEEVRACIARYK 173
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 26.1 bits (58), Expect = 1.2
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 494 ERPFVCK--LCGIAYKWRKNLVRHQK 517
+RP+ C C A+ +L+RH+K
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKK 26
Score = 24.2 bits (53), Expect = 4.6
Identities = 7/29 (24%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 409 EKKYVC--ELCGAYFIHKSSLVAHTTTHS 435
++ Y C C F+ L+ H +H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>d2z5da1 d.20.1.1 (A:23-174) Ubiquitin conjugating enzyme, UBC
{Human (Homo sapiens), E2 H [TaxId: 9606]}
Length = 152
Score = 28.1 bits (62), Expect = 1.4
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Query: 292 IHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDHVFSEHKNMLAFSKP 351
+ + K+ +E + N+ L + S +LA+ P
Sbjct: 59 PFKSPSIGFMNKIFHPNIDEASGTVCLDVINQT---WTALYDLTNIFESFLPQLLAYPNP 115
Query: 352 DDSENKISKVAEKQYWKDVEEKCRIIVEDTMRY 384
D N A Y EE + I E +Y
Sbjct: 116 IDPLNG---DAAAMYLHRPEEYKQKIKEYIQKY 145
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 25.8 bits (56), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 497 FVCKLCGIAYKWRKNLVRHQKNC 519
FVC CG + R + RH NC
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNC 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 25.4 bits (56), Expect = 1.8
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 200 EEKKYICEVCGTSFLTWSSLNSHKYSH 226
+ Y C C F + +L H H
Sbjct: 2 PPRSYTCSFCKREFRSAQALGGHMNVH 28
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.4 bits (55), Expect = 1.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 471 CDICGRVFLDSKNMKKHAAVHSTE 494
C CG+ F++S +K+H VH+ E
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA
{Escherichia coli [TaxId: 562]}
Length = 247
Score = 28.6 bits (62), Expect = 1.9
Identities = 15/226 (6%), Positives = 38/226 (16%), Gaps = 10/226 (4%)
Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSF 213
K IL+ + +D S I L+ +
Sbjct: 22 QKACSNIHILRLMREQGVKVDSVSLG-----EIERALAAGYNPQTHPDDIVFTADVIDQA 76
Query: 214 LTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDI 273
+ G R HS+
Sbjct: 77 TLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIW 136
Query: 274 MYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQS 333
+ + + + + +
Sbjct: 137 YTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGG 196
Query: 334 LWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVE 379
L + + + + A +Q + + ++ +E
Sbjct: 197 LSVPYQQGEEAV-----DTEHYYGLWNAAREQIARHLGHPVKLEIE 237
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 28.1 bits (61), Expect = 2.0
Identities = 15/91 (16%), Positives = 21/91 (23%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDF 443
+ CPHC + LK+ +K G S T V+ K
Sbjct: 28 FYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVP 87
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDIC 474
H R + D
Sbjct: 88 VMFNRIHTLRKPPKDEQELRQIFLDEGIDAA 118
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 27.9 bits (62), Expect = 2.8
Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 12/75 (16%)
Query: 412 YVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFC----EKVYSHRNRLRYHISTVHENKWK 467
Y+ + YF K + KC ++Y + I + W
Sbjct: 35 YIDDFTLQYFGSKKQYERYRK-------KCTLRHPPGNEIYRDDYVSFFEIDGRKQRTWC 87
Query: 468 SAACDICGRVFLDSK 482
C + ++FLD K
Sbjct: 88 RNLCLL-SKLFLDHK 101
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 25.5 bits (55), Expect = 3.1
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 451 RNRLRYHISTVHENKWKS-----AACDICGRVFLDSKNMKKHAAVHSTERPFV 498
+ + H + + +S A C IC V S+N+++H + +P V
Sbjct: 2 KAKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV 54
>d1hynp_ d.112.1.2 (P:) Erythrocite membrane Band 3 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 293
Score = 27.9 bits (62), Expect = 3.4
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 11/64 (17%)
Query: 338 VFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVEDTMRYQCPHCPSLLKTFW 397
V+ E + ++ K + E W +EE + + + PH L TFW
Sbjct: 2 VYVELQELVMDEKNQELRWM-----EAARWVQLEEN----LGENGAWGRPHLSHL--TFW 50
Query: 398 TLKE 401
+L E
Sbjct: 51 SLLE 54
>d1ka1a_ e.7.1.1 (A:) 3';5'-adenosine bisphosphatase, PAP
phosphatase {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 354
Score = 27.4 bits (59), Expect = 4.4
Identities = 18/165 (10%), Positives = 42/165 (25%), Gaps = 10/165 (6%)
Query: 173 LDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLNSHKYSHDDRKFS 232
LD G K F + + + ++ + + + F
Sbjct: 140 LDPIDGTKGFLRGEQFAVCL-ALIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGYIFR 198
Query: 233 CSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVCSQRCYLSATCSI 292
++ +P + + H++H +K +D++ V +I
Sbjct: 199 AVRGLGAFYSPSSDAESWTKIHVRH---------LKDTKDMITLEGVEKGHSSHDEQTAI 249
Query: 293 HRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLWDH 337
N + K + + +WDH
Sbjct: 250 KNKLNISKSLHLDSQAKYCLLALGLADVYLRLPIKLSYQEKIWDH 294
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 24.2 bits (53), Expect = 5.2
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 410 KKYVC--ELCGAYFIHKSSLVAHTTTHSNVK 438
+ ++C CG F L H TH+ K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase
{Trypanosoma brucei [TaxId: 5691]}
Length = 240
Score = 27.0 bits (58), Expect = 5.5
Identities = 25/226 (11%), Positives = 56/226 (24%), Gaps = 19/226 (8%)
Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSF 213
KC D +L T L D S + E I + ++
Sbjct: 25 VKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIGVPPEKIIYANPCKQIS--------H 76
Query: 214 LTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDI 273
+ ++ + D ++ + R + L + + + A
Sbjct: 77 IRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRISTDDSLARCRLSVKFGAKVEDCRF 136
Query: 274 MYWCNVCSQRCYLSATCSIHRPSNCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQS 333
+ + + S + + + ++
Sbjct: 137 ILEQAKKLNIDVTGVSFHVGSGSTDASTFA---------QAISDSRFVFDMGTELGFNMH 187
Query: 334 LWDHVFSEHKNMLAFSKPDDSENKISKVAEKQYWKDVEEKCRIIVE 379
+ D A K ++ I+ EK + D+ K I+ E
Sbjct: 188 ILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDL--KLTIVAE 231
>d1hk8a_ c.7.1.3 (A:) Class III anaerobic ribonucleotide reductase
NRDD subunit {Bacteriophage T4 [TaxId: 10665]}
Length = 561
Score = 27.2 bits (60), Expect = 6.2
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 9/40 (22%)
Query: 205 ICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPI 244
C CG++ H+ + + F CS CG + +
Sbjct: 517 KCFTCGST---------HEMTPTENGFVCSICGETDPKKM 547
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 26.7 bits (59), Expect = 6.3
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 412 YVCELCGAYFIHKSSLVAHTTTHSNVKFKCDFCEKVYSHRNRLRYHISTVHENKWKSAAC 471
++CE C Y ++ S H +++ +++Y N + V K
Sbjct: 32 WLCEYCLKYMKYEKSYRFHL---GQCQWRQPPGKEIYRKSN---ISVHEVDGKDHKIYCQ 85
Query: 472 DIC--GRVFLDSK 482
++C ++FLD K
Sbjct: 86 NLCLLAKLFLDHK 98
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 24.0 bits (52), Expect = 6.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 496 PFVCKLCGIAYKWRKNLVRHQKN 518
P+ C LC A+ R L+RH +
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQK 23
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 121
Score = 26.0 bits (57), Expect = 6.9
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 74 CQKCEESFDNCNNLWSHMFIKH 95
C C+ F + +SH ++H
Sbjct: 18 CLFCDRLFASAEETFSHCKLEH 39
>d1fgja_ a.138.1.3 (A:) Hydroxylamine oxidoreductase, HAO
{Nitrosomonas europaea [TaxId: 915]}
Length = 499
Score = 26.9 bits (58), Expect = 7.0
Identities = 24/196 (12%), Positives = 58/196 (29%), Gaps = 5/196 (2%)
Query: 161 AILQTFKNLKCHLDIHSGEKDFSCHINSNLSEHIRMHHTEEKKYICEVCGTSFLTWSSLN 220
A L +NLK ++ + N+ S K+ C C +
Sbjct: 100 ANLDKIRNLKSDDPLYYKKGKLEEVENNLRSMGKLGEKETLKEVGCIDCHVDVNKKDKAD 159
Query: 221 SHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNPEQYAVKSLQDIMYWCNVC 280
K +C C +R + +A+ +I
Sbjct: 160 HTKDIRMPTADTCGTCHLREFAERESERDTMVWPNGQWPAGRPSHALDYTANIETTVWAT 219
Query: 281 SQRCYLSATCSIHRPS-----NCKDQYKMSVSISNECDQHMECHTCNECDSKHNDCQSLW 335
+ ++ C++ + NC +++ S + S + + CH+ + ++ S
Sbjct: 220 MPQREVAEGCTMCHTNQNKCDNCHTRHEFSAAESRKPEACATCHSGVDHNNWEAYTMSKH 279
Query: 336 DHVFSEHKNMLAFSKP 351
+ +++ +
Sbjct: 280 GKLAEMNRDKWNWEVR 295
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 23.8 bits (52), Expect = 7.3
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 495 RPFVCK--LCGIAYKWRKNLVRHQK 517
RP+ C C + +L RH +
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIR 25
Score = 23.8 bits (52), Expect = 7.5
Identities = 8/28 (28%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 410 KKYVC--ELCGAYFIHKSSLVAHTTTHS 435
+ Y C E C F + L H H+
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHT 28
>d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 264
Score = 26.7 bits (57), Expect = 7.4
Identities = 20/162 (12%), Positives = 44/162 (27%), Gaps = 11/162 (6%)
Query: 154 YKCPDCPAILQTFKNLKCHLDIHSGE-----------KDFSCHINSNLSEHIRMHHTEEK 202
YK AI + L C D+ SG + ++ + E
Sbjct: 33 YKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEAN 92
Query: 203 KYICEVCGTSFLTWSSLNSHKYSHDDRKFSCSHCGNSYKNPIFLKRHFRESHLKHSKSNP 262
V S L + + + + + K + +++ +
Sbjct: 93 IRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESG 152
Query: 263 EQYAVKSLQDIMYWCNVCSQRCYLSATCSIHRPSNCKDQYKM 304
+ M + NV C++ + + P + + M
Sbjct: 153 IAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVM 194
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 23.4 bits (51), Expect = 7.8
Identities = 7/28 (25%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 410 KKYVC--ELCGAYFIHKSSLVAHTTTHS 435
K + C E C + +L H +H+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHT 28
Score = 23.4 bits (51), Expect = 8.6
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 495 RPFVCK--LCGIAYKWRKNLVRHQK 517
+P C C +Y +NL H +
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLR 25
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 24.7 bits (54), Expect = 8.5
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 411 KYVCELCGAYFIHKSSLVAHTTT 433
+ C C YFI ++L H +
Sbjct: 15 LHRCLACARYFIDSTNLKTHFRS 37
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 26.1 bits (56), Expect = 8.8
Identities = 8/102 (7%), Positives = 17/102 (16%), Gaps = 6/102 (5%)
Query: 384 YQCPHCPSLLKTFWTLKEHFNIHTSEKKYVCELCGAYFIHKSSLVAHTTTHSNVKFKCDF 443
+ CPHC + K + +
Sbjct: 28 FFCPHCYQFEEVLHISDNVKKKLPEGVKMT------KYHVNFMGGDLGKDLTQAWAVAMA 81
Query: 444 CEKVYSHRNRLRYHISTVHENKWKSAACDICGRVFLDSKNMK 485
L + + S D+ + +
Sbjct: 82 LGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYD 123
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.131 0.438
Gapped
Lambda K H
0.267 0.0376 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,152,796
Number of extensions: 106524
Number of successful extensions: 1100
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1061
Number of HSP's successfully gapped: 321
Length of query: 555
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 465
Effective length of database: 1,171,896
Effective search space: 544931640
Effective search space used: 544931640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.9 bits)