Query psy11593
Match_columns 400
No_of_seqs 227 out of 1631
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 22:39:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11593.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11593hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234|consensus 100.0 3.8E-51 8.2E-56 390.6 33.5 311 78-389 15-326 (345)
2 PF04142 Nuc_sug_transp: Nucle 100.0 2.4E-39 5.1E-44 304.8 24.6 233 144-376 5-244 (244)
3 PF06027 DUF914: Eukaryotic pr 99.9 4.6E-24 1E-28 208.2 31.2 230 154-390 77-310 (334)
4 PLN00411 nodulin MtN21 family 99.9 1.7E-23 3.7E-28 207.7 31.8 294 78-389 13-332 (358)
5 TIGR00817 tpt Tpt phosphate/ph 99.9 5.5E-23 1.2E-27 200.1 27.7 280 89-393 13-301 (302)
6 PRK11272 putative DMT superfam 99.9 4.2E-22 9.1E-27 193.1 31.9 278 79-388 9-288 (292)
7 PRK11453 O-acetylserine/cystei 99.9 8.1E-22 1.8E-26 191.7 33.2 282 81-394 7-296 (299)
8 PRK15430 putative chlorampheni 99.9 6.5E-22 1.4E-26 192.1 31.8 277 76-384 6-284 (296)
9 PF08449 UAA: UAA transporter 99.9 1E-21 2.2E-26 191.4 31.3 267 111-390 32-302 (303)
10 KOG3912|consensus 99.9 4E-22 8.6E-27 184.1 23.7 305 80-386 5-335 (372)
11 PTZ00343 triose or hexose phos 99.9 6.1E-21 1.3E-25 189.5 33.3 269 94-386 65-349 (350)
12 PRK11689 aromatic amino acid e 99.9 2.5E-21 5.4E-26 188.0 29.1 277 79-388 5-290 (295)
13 PRK10532 threonine and homoser 99.9 1.9E-20 4.1E-25 181.6 32.5 277 73-389 7-285 (293)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 7.9E-21 1.7E-25 180.3 29.2 256 90-380 1-259 (260)
15 TIGR00803 nst UDP-galactose tr 99.9 2.3E-22 5E-27 187.3 17.0 221 159-383 2-222 (222)
16 TIGR03340 phn_DUF6 phosphonate 99.8 1.9E-18 4E-23 166.6 25.1 271 80-382 3-280 (281)
17 COG0697 RhaT Permeases of the 99.8 5.8E-17 1.3E-21 154.9 33.8 283 75-386 4-288 (292)
18 TIGR00688 rarD rarD protein. T 99.8 2.7E-17 5.8E-22 156.3 28.0 250 79-360 3-255 (256)
19 KOG4510|consensus 99.8 1E-19 2.2E-24 167.4 4.0 281 76-382 36-322 (346)
20 KOG1581|consensus 99.8 2.8E-16 6.1E-21 147.5 26.6 270 105-389 44-317 (327)
21 KOG1580|consensus 99.8 8.7E-18 1.9E-22 152.0 15.2 262 106-384 47-312 (337)
22 COG2962 RarD Predicted permeas 99.7 1.6E-13 3.4E-18 129.0 27.6 274 77-387 6-285 (293)
23 TIGR00776 RhaT RhaT L-rhamnose 99.6 1.1E-12 2.4E-17 127.1 27.9 270 79-384 2-287 (290)
24 KOG1441|consensus 99.6 9.1E-15 2E-19 141.5 11.5 225 156-391 83-313 (316)
25 KOG1443|consensus 99.5 3.4E-12 7.4E-17 120.2 20.7 294 71-386 8-316 (349)
26 KOG2765|consensus 99.5 4E-12 8.6E-17 122.8 18.3 221 161-387 164-392 (416)
27 KOG1582|consensus 99.5 3.5E-12 7.6E-17 118.1 17.2 225 156-387 106-334 (367)
28 KOG1583|consensus 99.5 1.8E-13 4E-18 126.9 8.5 220 158-384 66-313 (330)
29 KOG1444|consensus 99.4 2.5E-11 5.4E-16 115.7 22.5 283 88-395 22-310 (314)
30 KOG2766|consensus 99.3 8.6E-13 1.9E-17 121.2 3.0 215 159-385 81-299 (336)
31 COG5006 rhtA Threonine/homoser 99.3 3.9E-09 8.5E-14 97.4 26.8 213 154-389 69-286 (292)
32 COG2510 Predicted membrane pro 99.0 3.7E-09 8.1E-14 87.8 12.1 134 81-228 6-139 (140)
33 KOG1442|consensus 99.0 2.1E-10 4.5E-15 106.7 4.3 218 161-386 107-328 (347)
34 PF13536 EmrE: Multidrug resis 99.0 5.5E-09 1.2E-13 86.9 12.5 76 156-232 34-110 (113)
35 PF03151 TPT: Triose-phosphate 99.0 1.4E-08 3E-13 88.5 15.5 139 247-385 1-153 (153)
36 COG5070 VRG4 Nucleotide-sugar 99.0 1.2E-08 2.7E-13 92.4 15.2 235 155-395 67-306 (309)
37 PF00892 EamA: EamA-like trans 98.9 4.9E-09 1.1E-13 87.3 9.8 122 89-226 2-124 (126)
38 KOG4314|consensus 98.9 5.5E-08 1.2E-12 86.7 13.5 207 163-386 60-277 (290)
39 PF06800 Sugar_transport: Suga 98.7 1.1E-06 2.4E-11 83.5 17.8 217 154-382 43-268 (269)
40 TIGR00950 2A78 Carboxylate/Ami 98.5 2.9E-06 6.3E-11 80.3 16.0 133 77-224 127-260 (260)
41 PF03151 TPT: Triose-phosphate 98.5 3.7E-06 8.1E-11 73.1 15.5 147 80-226 2-151 (153)
42 PF00892 EamA: EamA-like trans 98.5 1.3E-06 2.7E-11 72.6 11.1 125 256-384 1-125 (126)
43 COG2510 Predicted membrane pro 98.4 2.1E-06 4.6E-11 71.6 10.5 127 248-384 5-138 (140)
44 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.8E-06 3.9E-11 71.7 8.5 68 160-227 41-108 (111)
45 PRK13499 rhamnose-proton sympo 98.3 0.00054 1.2E-08 67.7 26.4 176 74-262 3-190 (345)
46 PF05653 Mg_trans_NIPA: Magnes 98.3 9.7E-06 2.1E-10 78.9 13.2 66 164-229 58-123 (300)
47 PTZ00343 triose or hexose phos 98.2 5E-05 1.1E-09 75.7 16.4 151 77-227 193-347 (350)
48 TIGR00817 tpt Tpt phosphate/ph 98.2 1.9E-05 4.1E-10 76.8 13.0 148 77-229 144-294 (302)
49 PRK10532 threonine and homoser 98.2 5.2E-05 1.1E-09 73.6 15.2 135 77-229 147-282 (293)
50 PRK11689 aromatic amino acid e 98.2 4.5E-05 9.8E-10 74.1 14.6 134 77-229 155-288 (295)
51 TIGR03340 phn_DUF6 phosphonate 98.1 7.5E-05 1.6E-09 71.9 15.2 130 248-385 3-135 (281)
52 PLN00411 nodulin MtN21 family 98.1 8.1E-05 1.8E-09 74.3 15.3 65 166-230 266-330 (358)
53 PRK02971 4-amino-4-deoxy-L-ara 98.1 0.00024 5.3E-09 60.5 15.7 121 246-388 2-125 (129)
54 PRK11272 putative DMT superfam 98.1 8.3E-05 1.8E-09 72.1 14.5 136 77-228 149-285 (292)
55 PRK11453 O-acetylserine/cystei 97.9 0.00035 7.7E-09 67.9 16.1 147 77-230 142-289 (299)
56 PRK15430 putative chlorampheni 97.9 0.00051 1.1E-08 66.7 17.1 137 243-384 5-144 (296)
57 PRK10452 multidrug efflux syst 97.8 0.00032 7E-09 58.8 11.1 69 322-390 39-108 (120)
58 TIGR00688 rarD rarD protein. T 97.8 0.0013 2.8E-08 62.4 16.8 134 247-383 3-140 (256)
59 PRK02971 4-amino-4-deoxy-L-ara 97.8 0.00014 3E-09 62.0 8.9 71 160-230 52-124 (129)
60 PRK10452 multidrug efflux syst 97.7 0.0002 4.3E-09 60.1 8.9 72 159-230 33-105 (120)
61 PRK09541 emrE multidrug efflux 97.6 0.00036 7.9E-09 57.7 8.9 71 159-229 33-104 (110)
62 PRK11431 multidrug efflux syst 97.6 0.00046 1E-08 56.5 9.4 70 159-228 32-102 (105)
63 COG2076 EmrE Membrane transpor 97.6 0.00045 9.7E-09 56.3 8.6 70 159-228 33-103 (106)
64 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.0007 1.5E-08 65.7 11.7 131 78-227 152-287 (290)
65 PRK15051 4-amino-4-deoxy-L-ara 97.5 0.00087 1.9E-08 55.5 10.1 61 324-384 48-108 (111)
66 PRK10650 multidrug efflux syst 97.5 0.00064 1.4E-08 56.1 9.0 69 158-226 37-106 (109)
67 PF08449 UAA: UAA transporter 97.5 0.0022 4.8E-08 62.5 13.9 142 79-229 155-298 (303)
68 PF05653 Mg_trans_NIPA: Magnes 97.4 0.0014 3E-08 64.0 10.6 117 243-383 4-120 (300)
69 PF13536 EmrE: Multidrug resis 97.4 0.0048 1.1E-07 51.0 12.5 61 325-386 47-107 (113)
70 COG5006 rhtA Threonine/homoser 97.3 0.0053 1.1E-07 57.4 12.9 58 167-224 221-278 (292)
71 PRK09541 emrE multidrug efflux 97.3 0.004 8.7E-08 51.5 10.8 64 324-387 41-105 (110)
72 COG0697 RhaT Permeases of the 97.3 0.0098 2.1E-07 56.4 15.2 74 156-229 214-288 (292)
73 PF06800 Sugar_transport: Suga 97.2 0.0046 1E-07 59.0 12.3 121 76-217 136-256 (269)
74 PF00893 Multi_Drug_Res: Small 97.0 0.0031 6.7E-08 50.5 7.0 59 160-218 33-92 (93)
75 KOG2922|consensus 96.9 0.0088 1.9E-07 57.8 10.4 70 161-230 69-138 (335)
76 PF10639 UPF0546: Uncharacteri 96.8 0.0035 7.5E-08 51.9 6.4 69 158-226 43-112 (113)
77 PRK11431 multidrug efflux syst 96.7 0.021 4.5E-07 46.8 10.2 61 324-384 40-101 (105)
78 COG2076 EmrE Membrane transpor 96.7 0.019 4.1E-07 46.9 9.7 62 324-385 41-103 (106)
79 PRK10650 multidrug efflux syst 96.7 0.024 5.1E-07 46.8 10.1 61 324-384 46-107 (109)
80 COG4975 GlcU Putative glucose 96.6 0.00025 5.4E-09 65.8 -1.9 270 79-382 3-282 (288)
81 PF06027 DUF914: Eukaryotic pr 96.5 0.11 2.4E-06 51.4 15.6 63 324-386 90-152 (334)
82 PRK13499 rhamnose-proton sympo 96.1 0.15 3.3E-06 50.6 13.8 141 243-390 4-158 (345)
83 KOG1441|consensus 96.0 0.014 3.1E-07 57.0 6.5 145 76-227 161-306 (316)
84 PF04657 DUF606: Protein of un 95.9 0.53 1.1E-05 40.5 15.1 131 248-382 3-138 (138)
85 COG2962 RarD Predicted permeas 95.8 0.3 6.5E-06 46.9 14.0 79 152-230 207-285 (293)
86 PF06379 RhaT: L-rhamnose-prot 95.8 0.15 3.2E-06 50.1 12.0 143 243-394 4-162 (344)
87 PF04657 DUF606: Protein of un 95.5 1.1 2.5E-05 38.4 15.4 67 159-225 67-138 (138)
88 PF00893 Multi_Drug_Res: Small 95.3 0.092 2E-06 41.9 7.6 53 324-376 40-93 (93)
89 PF04142 Nuc_sug_transp: Nucle 95.1 0.19 4.2E-06 47.5 10.2 67 324-390 28-94 (244)
90 PF10639 UPF0546: Uncharacteri 95.1 0.068 1.5E-06 44.3 6.2 63 320-382 48-111 (113)
91 TIGR00803 nst UDP-galactose tr 94.6 0.041 8.8E-07 51.0 4.4 67 159-225 155-221 (222)
92 KOG1581|consensus 94.3 0.4 8.8E-06 46.2 10.1 138 75-225 169-310 (327)
93 KOG1580|consensus 94.2 0.064 1.4E-06 49.8 4.5 74 153-226 238-311 (337)
94 KOG2922|consensus 92.7 0.072 1.6E-06 51.6 2.3 125 242-390 17-142 (335)
95 COG3238 Uncharacterized protei 92.5 6.7 0.00014 34.2 15.2 136 246-387 5-148 (150)
96 PF07857 DUF1632: CEO family ( 92.1 0.68 1.5E-05 44.0 8.0 128 247-386 1-135 (254)
97 KOG1444|consensus 92.0 1 2.2E-05 43.8 9.2 145 78-229 157-301 (314)
98 COG5070 VRG4 Nucleotide-sugar 91.5 0.62 1.3E-05 43.1 6.8 69 158-226 226-294 (309)
99 KOG4510|consensus 91.5 0.11 2.5E-06 49.1 2.1 59 330-388 114-172 (346)
100 KOG2765|consensus 91.0 4.6 9.9E-05 40.3 12.6 148 75-232 244-394 (416)
101 PF06379 RhaT: L-rhamnose-prot 90.3 20 0.00043 35.5 24.5 179 75-266 4-193 (344)
102 COG4975 GlcU Putative glucose 88.5 0.21 4.6E-06 46.8 1.2 63 156-218 209-271 (288)
103 KOG1583|consensus 87.2 2.7 5.9E-05 40.2 7.7 163 53-227 133-313 (330)
104 PF07857 DUF1632: CEO family ( 87.1 13 0.00028 35.4 12.3 168 80-270 2-207 (254)
105 PF04342 DUF486: Protein of un 86.5 1.3 2.7E-05 36.1 4.4 41 342-382 65-105 (108)
106 COG3238 Uncharacterized protei 86.3 22 0.00047 31.0 12.9 127 84-228 15-146 (150)
107 COG3169 Uncharacterized protei 81.5 26 0.00057 28.2 11.5 41 343-383 73-113 (116)
108 PRK02237 hypothetical protein; 74.2 21 0.00046 29.2 7.6 49 340-388 58-108 (109)
109 PF05297 Herpes_LMP1: Herpesvi 72.7 1.2 2.5E-05 42.6 0.0 107 164-279 30-139 (381)
110 KOG2234|consensus 72.0 1.1E+02 0.0024 30.5 15.4 61 324-384 103-163 (345)
111 KOG4831|consensus 71.2 6 0.00013 32.2 3.7 62 321-382 60-122 (125)
112 PF02694 UPF0060: Uncharacteri 70.5 7.4 0.00016 31.8 4.1 51 338-388 54-106 (107)
113 KOG3912|consensus 65.8 20 0.00044 34.6 6.7 60 325-384 98-157 (372)
114 KOG4831|consensus 62.4 11 0.00025 30.7 3.7 69 157-226 53-123 (125)
115 TIGR02865 spore_II_E stage II 61.2 2.7E+02 0.0058 31.0 16.2 44 183-226 11-54 (764)
116 COG1742 Uncharacterized conser 60.2 32 0.00069 28.0 5.9 52 337-388 54-107 (109)
117 PF04342 DUF486: Protein of un 59.9 26 0.00056 28.6 5.4 33 194-226 74-106 (108)
118 PF06570 DUF1129: Protein of u 55.9 1.6E+02 0.0035 26.8 10.9 30 155-184 145-174 (206)
119 PRK02237 hypothetical protein; 51.1 25 0.00054 28.8 4.0 39 191-229 68-106 (109)
120 KOG1443|consensus 49.8 2E+02 0.0043 28.3 10.5 68 159-226 246-313 (349)
121 PF02694 UPF0060: Uncharacteri 47.5 47 0.001 27.2 5.0 41 190-230 65-105 (107)
122 PF06609 TRI12: Fungal trichot 39.9 4.9E+02 0.011 28.1 12.8 22 208-229 236-257 (599)
123 COG1742 Uncharacterized conser 39.6 2E+02 0.0043 23.5 7.4 41 190-230 66-106 (109)
124 PF03023 MVIN: MviN-like prote 38.8 4.5E+02 0.0097 26.9 12.8 35 175-209 371-405 (451)
125 COG3169 Uncharacterized protei 37.7 1.7E+02 0.0036 23.7 6.6 31 197-227 84-114 (116)
126 KOG1582|consensus 36.1 1.2E+02 0.0027 29.3 6.6 54 178-231 282-335 (367)
127 PF06645 SPC12: Microsomal sig 35.4 1.8E+02 0.0038 22.2 6.4 16 382-397 58-73 (76)
128 PF06123 CreD: Inner membrane 34.1 4.3E+02 0.0094 27.2 10.8 60 203-274 318-379 (430)
129 TIGR00891 2A0112 putative sial 27.0 5.7E+02 0.012 24.5 11.6 18 207-224 5-22 (405)
130 KOG1442|consensus 26.8 47 0.001 32.1 2.3 137 76-222 183-321 (347)
131 PRK11715 inner membrane protei 26.3 6.8E+02 0.015 25.9 10.7 58 205-274 326-385 (436)
132 KOG1619|consensus 26.3 5.6E+02 0.012 24.2 9.9 17 369-385 207-223 (245)
133 PF07444 Ycf66_N: Ycf66 protei 25.9 45 0.00098 26.1 1.7 33 364-396 4-36 (84)
134 PF09656 PGPGW: Putative trans 24.4 2.6E+02 0.0057 19.9 5.1 44 212-270 5-48 (53)
135 PF07822 Toxin_13: Neurotoxin 24.2 18 0.00039 24.8 -0.7 13 47-59 8-20 (55)
136 PF06570 DUF1129: Protein of u 23.8 5.5E+02 0.012 23.2 9.5 24 247-270 112-135 (206)
137 KOG4314|consensus 22.0 1.3E+02 0.0028 27.7 4.0 53 332-384 72-124 (290)
138 TIGR01167 LPXTG_anchor LPXTG-m 20.6 1.5E+02 0.0032 18.3 3.1 21 365-385 10-30 (34)
No 1
>KOG2234|consensus
Probab=100.00 E-value=3.8e-51 Score=390.64 Aligned_cols=311 Identities=49% Similarity=0.823 Sum_probs=284.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccch
Q psy11593 78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTL 157 (400)
Q Consensus 78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 157 (400)
+++++++++++++++..+.+||++.++ +++|.++++|++.|++|+++|+.+.+++.++..++..+.+.+++..+|++..
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~-~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l 93 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTRE-KPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETL 93 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHH
Confidence 999999999999999999999999875 8899999999999999999999999988642113334456677777888999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC-C
Q psy11593 158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA-R 236 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~-~ 236 (400)
+..+||++|++||++.|+++.++|++++++.+|+++++||++++++|+||++++||.+++++++|+.++|.+...+.+ +
T Consensus 94 k~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~ 173 (345)
T KOG2234|consen 94 KVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAK 173 (345)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999954332221 1
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHH
Q psy11593 237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFI 316 (400)
Q Consensus 237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~ 316 (400)
+..+..+...|..+++.+|++||++++|+||++|+.+.+.|+||+|++++|++++++.++..|++++...++|+||+..+
T Consensus 174 ~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~v 253 (345)
T KOG2234|consen 174 SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIV 253 (345)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHH
Confidence 23456788999999999999999999999999999999999999999999999999999888998887788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593 317 VFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 317 ~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~ 389 (400)
|++++.+++||+++++++||+|++.|.++++++++++.+.|+.+||.+||..+++|+.+|+.++++|+..|.+
T Consensus 254 w~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 254 WLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999977665
No 2
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=100.00 E-value=2.4e-39 Score=304.83 Aligned_cols=233 Identities=47% Similarity=0.781 Sum_probs=212.9
Q ss_pred HhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhh
Q psy11593 144 LVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGV 223 (400)
Q Consensus 144 ~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GV 223 (400)
+++++...++|+.+++++||++|+++|++.|++++++|++++|+++|+++++||++++++||||++++||+|+++.++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv 84 (244)
T PF04142_consen 5 SLKDEVWKSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGV 84 (244)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHH
Confidence 45566667789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred heeecccccccCC--CC-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHH
Q psy11593 224 ALVQLSSVVEKAR--PA-----DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF 296 (400)
Q Consensus 224 viv~~~~~~~~~~--~~-----~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~ 296 (400)
++++.++....+. +. ....+...|+++++++++++|+++||.||++|+.+.++|.+|+|++++|++++++...
T Consensus 85 ~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~ 164 (244)
T PF04142_consen 85 VLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALL 164 (244)
T ss_pred heeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9998876543111 11 1234568999999999999999999999999999899999999999999999998877
Q ss_pred hhcCchhhhccccccchHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHH
Q psy11593 297 ISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV 376 (400)
Q Consensus 297 ~~~~~~i~~~~~~~~~~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lV 376 (400)
+.+++++.+.++|+||+.++|..++.++++|+++++++||+|++.|++++.++++++.++++++||.++|..+++|.++|
T Consensus 165 ~~~~~~~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 165 LSDGSAISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred cccccccccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 78888888889999999999999999999999999999999999999999999999999999999999999999998764
No 3
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=4.6e-24 Score=208.20 Aligned_cols=230 Identities=18% Similarity=0.211 Sum_probs=185.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccc
Q psy11593 154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE 233 (400)
Q Consensus 154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~ 233 (400)
+++++|.+.|++++.+|.+...|++|++.+.++++.++.+++++++++++||+|+++.||+|+++.++|++++...|...
T Consensus 77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~ 156 (334)
T PF06027_consen 77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS 156 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999988776543
Q ss_pred cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccch
Q psy11593 234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYT 313 (400)
Q Consensus 234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~ 313 (400)
++ ++....+...|++++++||+++|+++|+.|++.|+.+. .....+++++|.+++.+...+.+.+.++.. .|+
T Consensus 157 ~~-~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~--~~~lg~~Glfg~ii~~iq~~ile~~~i~~~----~w~ 229 (334)
T PF06027_consen 157 GS-DSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPR--VEFLGMLGLFGFIISGIQLAILERSGIESI----HWT 229 (334)
T ss_pred cc-cCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCH--HHHHHHHHHHHHHHHHHHHHheehhhhhcc----CCC
Confidence 21 11234577899999999999999999999999987653 333456778888887776655555544321 123
Q ss_pred HHHHHHHH----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593 314 WFIVFLVL----LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 314 ~~~~l~i~----~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~ 389 (400)
+..+...+ ...+...++..+++..++..-+....++.+++.++++++||+++++..++|.++|++|..+|+..+++
T Consensus 230 ~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 230 SQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 33222222 12223345567789999988888888899999999999999999999999999999999999876655
Q ss_pred C
Q psy11593 390 K 390 (400)
Q Consensus 390 ~ 390 (400)
.
T Consensus 310 ~ 310 (334)
T PF06027_consen 310 E 310 (334)
T ss_pred c
Confidence 4
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.93 E-value=1.7e-23 Score=207.68 Aligned_cols=294 Identities=11% Similarity=0.091 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcC-CchhhhHHHhhhhcccCcccc
Q psy11593 78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEG-FHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~ 156 (400)
..++.+++.=+.++.+.++.|.+-+.+ .++...++.|..+..++.+++.+..++ +..++ .+++++
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G----~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~----------~~~~~~ 78 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKG----LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPP----------LSVSIL 78 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCC----CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCc----------chHHHH
Confidence 346677777777888889999987542 355557788877776665555443322 11110 012445
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHH------hcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIIL------LKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~------L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
..+++.+++.++.+.+.++|+++++++.++++.++.|++++++++++ +|||++++||+|++++++|++++...+
T Consensus 79 ~~l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~ 158 (358)
T PLN00411 79 SKIGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH 158 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 55677777666677899999999999999999999999999999999 699999999999999999998875432
Q ss_pred cccc---C----------C--CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHH
Q psy11593 231 VVEK---A----------R--PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTC 295 (400)
Q Consensus 231 ~~~~---~----------~--~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~ 295 (400)
.... + . ......+...|++++++++++||++.++.++..++++........+..+.+..+.++..
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l 238 (358)
T PLN00411 159 GPRVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGL 238 (358)
T ss_pred CcccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHH
Confidence 2100 0 0 00111223569999999999999999999998877654322222233333333333333
Q ss_pred HhhcCchhhhccccccchHHHHHHHHHH----HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHH
Q psy11593 296 FISDWDKIFQHGFFYNYTWFIVFLVLLN----ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIV 371 (400)
Q Consensus 296 ~~~~~~~i~~~~~~~~~~~~~~l~i~~~----al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~li 371 (400)
..++.+ ... ....++...+. +++. +++..+..+.+++.++...+...++.|++++++|++++||++++.+++
T Consensus 239 ~~~~~~-~~~--~~~~~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i 314 (358)
T PLN00411 239 VVEKNN-PSV--WIIHFDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI 314 (358)
T ss_pred HHccCC-ccc--ceeccchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 222111 110 01112222111 2222 234444556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCC
Q psy11593 372 GAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 372 G~~lVi~gv~ly~~~~~~ 389 (400)
|+++|+.|+++..+.+++
T Consensus 315 G~~LIl~Gv~l~~~~~~~ 332 (358)
T PLN00411 315 GGILITLGFYAVMWGKAN 332 (358)
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 999999999998765443
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.92 E-value=5.5e-23 Score=200.08 Aligned_cols=280 Identities=17% Similarity=0.207 Sum_probs=188.0
Q ss_pred HhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHH
Q psy11593 89 QNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVI 168 (400)
Q Consensus 89 ~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~ 168 (400)
...+..+.-|+.-+. .+ .|....+.+.+...+.+... ++...++.++ .+++++......|++.++
T Consensus 13 ~~~~~~~~NK~~l~~---~~-~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 13 LNVYFNIYNKKLLNV---FP-YPYFKTLISLAVGSLYCLLS-WSSGLPKRLK----------ISSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHhh---CC-hhHHHHHHHHHHHHHHHHHH-HHhCCCCCCC----------CCHHHHHHHHHHHHHHHH
Confidence 334445667776642 11 35556677666654443333 2211111111 123455567778888889
Q ss_pred HHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHH
Q psy11593 169 QNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGF 248 (400)
Q Consensus 169 ~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~ 248 (400)
+..+.++++++++++.++++.++.|+++++++++++|||+++++|.+++++++|+++...++. .....|+
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~----------~~~~~G~ 147 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL----------SFNWAGF 147 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc----------cccHHHH
Confidence 999999999999999999999999999999999999999999999999999999987632211 2345799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccc---cch-HHHHHHHHHHH
Q psy11593 249 AATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFY---NYT-WFIVFLVLLNA 324 (400)
Q Consensus 249 l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~---~~~-~~~~l~i~~~a 324 (400)
+++++++++++++.++.||..++++.+...........+.++.++.....++......+..+ ..+ ...+...+..+
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA 227 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence 99999999999999999998873222222233333444555544444333322111100000 001 11222122222
Q ss_pred HH-----HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCCCCC
Q psy11593 325 SG-----GLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPKP 393 (400)
Q Consensus 325 l~-----g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~~~~ 393 (400)
++ .......+++.++.+.+...++.+++++++|++++||++|..+++|+++++.|+++|++.+.++++|
T Consensus 228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~~ 301 (302)
T TIGR00817 228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPKP 301 (302)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcCC
Confidence 11 1122346789999999999999999999999999999999999999999999999999766544443
No 6
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.92 E-value=4.2e-22 Score=193.08 Aligned_cols=278 Identities=11% Similarity=0.072 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593 79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK 158 (400)
Q Consensus 79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 158 (400)
-.+.+++.++.|+++.+.+|+..+ +.+|.+.++.|.+...++.+++...+++ +.. .++++..
T Consensus 9 ~~~~~~~~~~iWg~~~~~~K~~~~-----~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~~~------------~~~~~~~ 70 (292)
T PRK11272 9 LFGALFALYIIWGSTYLVIRIGVE-----SWPPLMMAGVRFLIAGILLLAFLLLRGH-PLP------------TLRQWLN 70 (292)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHHHHhCC-CCC------------cHHHHHH
Confidence 456677889999999999998764 3588999999998877665555444332 111 1123333
Q ss_pred hHHHHHH-HHHHHHHHHHHh-hcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCC
Q psy11593 159 VGVPALL-YVIQNNLLYISA-SNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKAR 236 (400)
Q Consensus 159 ~~i~a~l-~~~~~~l~~~al-~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~ 236 (400)
....+.+ ...++.+.+++. ++++++..+++.++.|+++++++++ +|||++++||+|++++++|+.++..++..
T Consensus 71 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~---- 145 (292)
T PRK11272 71 AALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL---- 145 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc----
Confidence 4555554 457788899999 9999999999999999999999986 69999999999999999999887543221
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHH
Q psy11593 237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFI 316 (400)
Q Consensus 237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~ 316 (400)
+....|+++.+++++++|+++++.||..+++ +......++...+.+.. +.....+.. .........+-...
T Consensus 146 -----~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~i~ 216 (292)
T PRK11272 146 -----SGNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLL-IASLLSGER-LTALPTLSGFLALG 216 (292)
T ss_pred -----ccchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHH-HHHHHcCCc-ccccCCHHHHHHHH
Confidence 1335799999999999999999999865432 23333333333333322 222221111 00000001111222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 317 VFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 317 ~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
++.++..+++..+..+.+|+.++...+...+++|+++.+++++++||++|..+++|+++|+.|+++.++.++
T Consensus 217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 233334445555666778999999999999999999999999999999999999999999999988766544
No 7
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.92 E-value=8.1e-22 Score=191.71 Aligned_cols=282 Identities=12% Similarity=0.053 Sum_probs=189.1
Q ss_pred HHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhH
Q psy11593 81 TSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVG 160 (400)
Q Consensus 81 l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (400)
+..++.++.|+++.+.+|..-+ +.+|...+++|.++..++.+++..+ ++ .+ ++ ...
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~-----~~~p~~~~~~R~~~a~~~l~~~~~~-~~--~~-------------~~---~~~ 62 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH-----NMPPLMLAGLRFMLVAFPAIFFVAR-PK--VP-------------LN---LLL 62 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHHhcC-CC--Cc-------------hH---HHH
Confidence 4566778999999999998764 3688999999887754333322211 11 00 01 122
Q ss_pred HHHHH-HHHHHHHHHHHhhc-CChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCC
Q psy11593 161 VPALL-YVIQNNLLYISASN-LDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPA 238 (400)
Q Consensus 161 i~a~l-~~~~~~l~~~al~~-l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~ 238 (400)
..+++ ...+..+.|.++++ .|++.+.++.++.|+++++++++++|||++++||++++++++|+.++..++.+.
T Consensus 63 ~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~----- 137 (299)
T PRK11453 63 GYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG----- 137 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC-----
Confidence 22332 34566677889987 799999999999999999999999999999999999999999999886543221
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCch-HHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH
Q psy11593 239 DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVS-IWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV 317 (400)
Q Consensus 239 ~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~-~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 317 (400)
......|++++++++++++++.++.||..++.+.. ...........+.+.........+++.... ..+..++...|
T Consensus 138 --~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 214 (299)
T PRK11453 138 --QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTI 214 (299)
T ss_pred --cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHH
Confidence 12235799999999999999999999976543221 111112212222221111111222221100 00112233333
Q ss_pred HHHH-----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCCCC
Q psy11593 318 FLVL-----LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPK 392 (400)
Q Consensus 318 l~i~-----~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~~~ 392 (400)
..++ ..+++..+....+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+++..+..+.+.+
T Consensus 215 ~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~~~~~ 294 (299)
T PRK11453 215 LSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLRWRKA 294 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchhhhcc
Confidence 3333 33444445555668888989999999999999999999999999999999999999999887665543433
Q ss_pred CC
Q psy11593 393 PP 394 (400)
Q Consensus 393 ~~ 394 (400)
++
T Consensus 295 ~~ 296 (299)
T PRK11453 295 VK 296 (299)
T ss_pred cc
Confidence 33
No 8
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.92 E-value=6.5e-22 Score=192.15 Aligned_cols=277 Identities=10% Similarity=0.089 Sum_probs=190.8
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc
Q psy11593 76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD 155 (400)
Q Consensus 76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 155 (400)
+..+++..++.++.|+.+.+.+|... ++++.++++.|.++..++.+++....++ .++.. +.. .++++
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~~------~~~~~~~~~~R~~~a~~~l~~~~~~~~~--~~~~~----~~~-~~~~~ 72 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLIY------YVPADEILTHRVIWSFFFMVVLMSICRQ--WSYLK----TLI-QTPQK 72 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHHHHcc--HHHHH----HHH-cCHHH
Confidence 34567788888899999999999853 2588999999999877655544433221 11110 100 12344
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593 156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA 235 (400)
Q Consensus 156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~ 235 (400)
+......+++..+++.++|+|++++|++.++++.++.|+++++++++++|||++++||.+++++++|++++..++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~--- 149 (296)
T PRK15430 73 IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS--- 149 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC---
Confidence 33345666778899999999999999999999999999999999999999999999999999999999988643211
Q ss_pred CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHH
Q psy11593 236 RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315 (400)
Q Consensus 236 ~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 315 (400)
.. .+.+++++++|++.++.||..++........+.+...++.+.... ..+... ... .......+
T Consensus 150 -------~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~-~~~~~~~~ 213 (296)
T PRK15430 150 -------LP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSST-SHM-GQNPMSLN 213 (296)
T ss_pred -------cc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCCc-ccc-cCCcHHHH
Confidence 11 346788999999999888864322222222222222222221111 111110 000 01111111
Q ss_pred HHHH--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 316 IVFL--VLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 316 ~~l~--i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
.+.. .+..+++..+....+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+.+..
T Consensus 214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1111 12344566777888999999999999999999999999999999999999999999988765443
No 9
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.91 E-value=1e-21 Score=191.45 Aligned_cols=267 Identities=19% Similarity=0.259 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhh
Q psy11593 111 SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQ 190 (400)
Q Consensus 111 ~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~ 190 (400)
+..+.+++.+...+++.......++... +...+..+.+.++++.+.+.+.+.|++++|.++.+++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks 98 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKFPKS-------------RKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKS 98 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccCC-------------CcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhh
Confidence 5566777777777766665554431111 113345689999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11593 191 LKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILK 270 (400)
Q Consensus 191 ~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk 270 (400)
++|+++++++++++|||++++||+++++.++|+++....+..++++++........|+++++++.++.|+.++++||+++
T Consensus 99 ~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~ 178 (303)
T PF08449_consen 99 SKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFK 178 (303)
T ss_pred hHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987765433222222222334999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHhHHHHHHHHHHhh-cCchhhhccccccchHHHH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy11593 271 GSDVSIWMRNVQLSLLSLPCAACTCFIS-DWDKIFQHGFFYNYTWFIV---FLVLLNASGGLIVAVVVKYADNILKGFAT 346 (400)
Q Consensus 271 ~~~~~~~~~~~~l~~~g~~~~l~~~~~~-~~~~i~~~~~~~~~~~~~~---l~i~~~al~g~~~~~~~k~~~ai~~~~~~ 346 (400)
+++.+.+........++.+..++..... .++......+...++...+ +..+.++++...+....+..++...+..+
T Consensus 179 ~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~ 258 (303)
T PF08449_consen 179 KYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT 258 (303)
T ss_pred HhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence 8876666555556677777665554431 1221111112222222111 22234556666677788999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCC
Q psy11593 347 SLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK 390 (400)
Q Consensus 347 ~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~ 390 (400)
+++.++++++|+++||+++++.+|+|.++++.|+.+|.+.++++
T Consensus 259 t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 259 TLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999998877664
No 10
>KOG3912|consensus
Probab=99.90 E-value=4e-22 Score=184.15 Aligned_cols=305 Identities=17% Similarity=0.206 Sum_probs=216.3
Q ss_pred HHHHHHHHHHhhHHHHHHHHcccc--C--C--CCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCc
Q psy11593 80 TTSLITLTLQNAIVSLSMRYARMK--N--K--DELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNP 153 (400)
Q Consensus 80 ~l~l~ll~~~~~~~~l~~k~s~~~--~--~--~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~ 153 (400)
.++-+++++..+.++++.||+.+. + + ++++..+..+|+.|+.++.+-..+-.+..++........+-.+. .+|
T Consensus 5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~-~~p 83 (372)
T KOG3912|consen 5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQD-SSP 83 (372)
T ss_pred hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccc-cCC
Confidence 445566778889999999999764 1 2 46788999999999998876555544443322221111111111 124
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccc
Q psy11593 154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE 233 (400)
Q Consensus 154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~ 233 (400)
-+...+..|++|+..+..+.|.|+.+++++.+|+++...++||++|+..|||++++.+||+|+....+|++++...+...
T Consensus 84 f~p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~ 163 (372)
T KOG3912|consen 84 FNPVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHL 163 (372)
T ss_pred CCcceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccc
Confidence 44455778999999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHH-HHHHH---HhhcCchhh--hcc
Q psy11593 234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPC-AACTC---FISDWDKIF--QHG 307 (400)
Q Consensus 234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~-~l~~~---~~~~~~~i~--~~~ 307 (400)
.+++.....+...|+++++.+.+.-|.+.|+.||.+|++++.+....-+-+.+|.++ .++.+ +...+...+ +.+
T Consensus 164 ~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g 243 (372)
T KOG3912|consen 164 VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG 243 (372)
T ss_pred ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence 222222335678999999999999999999999999988765544434446666433 33222 222221110 111
Q ss_pred ccccchHHHHH-----HHHHHHHHH---------HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHH
Q psy11593 308 FFYNYTWFIVF-----LVLLNASGG---------LIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGA 373 (400)
Q Consensus 308 ~~~~~~~~~~l-----~i~~~al~g---------~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~ 373 (400)
-+..|.. .|. ..+..++++ ..--.+.|+.++..+...+.++..+.++++..+.+|.+...|+.|.
T Consensus 244 ~~eD~~~-~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGF 322 (372)
T KOG3912|consen 244 VLEDWGD-AFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGF 322 (372)
T ss_pred chhhHHH-HHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 1111100 000 001112222 2222467999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccC
Q psy11593 374 FFVMCSVFLYSRT 386 (400)
Q Consensus 374 ~lVi~gv~ly~~~ 386 (400)
++.+.|+++|+..
T Consensus 323 liLi~Gi~lY~~i 335 (372)
T KOG3912|consen 323 LILIMGIILYNQI 335 (372)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999843
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.90 E-value=6.1e-21 Score=189.47 Aligned_cols=269 Identities=18% Similarity=0.165 Sum_probs=187.6
Q ss_pred HHHHHHccccCCCCcch-HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHH
Q psy11593 94 SLSMRYARMKNKDELFI-SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNL 172 (400)
Q Consensus 94 ~l~~k~s~~~~~~~~~~-~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l 172 (400)
.+..|+.-+. ++ |.++..+|-++..+++..+. ..+.++.++. . ..++++......|+++...+..
T Consensus 65 ~~~nK~vl~~-----~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~----~----~~~~~~~~llp~gl~~~~~~~~ 130 (350)
T PTZ00343 65 VVDNKLALNM-----LPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRI----K----SLKLFLKNFLPQGLCHLFVHFG 130 (350)
T ss_pred HHHHHHHHHh-----CChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCC----C----CHHHHHHHHHHHHHHHHHHHHH
Confidence 4556766542 45 88888998888776655442 2211111110 0 0012344567788888777777
Q ss_pred HHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHH
Q psy11593 173 LYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATI 252 (400)
Q Consensus 173 ~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l 252 (400)
.+.|+++.+++.++++.++.|+++++++++++|||+++++|+++++.++||.+...++. .....|+++++
T Consensus 131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~----------~~~~~G~~~~l 200 (350)
T PTZ00343 131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL----------HFTWLAFWCAM 200 (350)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc----------hhHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999864322 13467999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc---hHHHHHHHH--HHhHHHHHHHHHHhhcCchhhh-c----cccccchH-HHHHHHH
Q psy11593 253 LACLLSGLAGVYFEMILKGSDV---SIWMRNVQL--SLLSLPCAACTCFISDWDKIFQ-H----GFFYNYTW-FIVFLVL 321 (400)
Q Consensus 253 ~aa~~~al~~V~~ekllk~~~~---~~~~~~~~l--~~~g~~~~l~~~~~~~~~~i~~-~----~~~~~~~~-~~~l~i~ 321 (400)
+|++++|+.+++.||.+++.+. +....+.+. ...|.++.++.....++..... . ..+..+.. ..+..++
T Consensus 201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 280 (350)
T PTZ00343 201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF 280 (350)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence 9999999999999999876431 111122222 3455555555444333221100 0 00111111 1112233
Q ss_pred HHHHHHHHHH----HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593 322 LNASGGLIVA----VVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 322 ~~al~g~~~~----~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
..++.+.+.. +.++..+++..+.+.++.+++++++|+++|||++|..+++|.+++++|+++|++-
T Consensus 281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 3344444433 4778899999999999999999999999999999999999999999999999865
No 12
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.90 E-value=2.5e-21 Score=187.97 Aligned_cols=277 Identities=16% Similarity=0.081 Sum_probs=188.7
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593 79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK 158 (400)
Q Consensus 79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 158 (400)
.++++++.++.|+++.+.+|.+.+ .++|....++|..+..++.+++. .+++.++ .+...
T Consensus 5 ~~l~~l~a~~~Wg~~~~~~k~~~~-----~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~-------------~~~~~ 63 (295)
T PRK11689 5 ATLIGLIAILLWSTMVGLIRGVSE-----SLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQ-------------FPKRY 63 (295)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc-----cCChHHHHHHHHHHHHHHHHHHc---ccccccc-------------ccHHH
Confidence 456677788999999999999764 36888899998766554433321 1101110 11112
Q ss_pred hHHHHHHHHHHHHHHHHHhh----cCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccccc
Q psy11593 159 VGVPALLYVIQNNLLYISAS----NLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEK 234 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~----~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~ 234 (400)
....++.+++++.+.+.+++ +++++...++.++.|+++++++++++|||++++||.+++++++|++++..++.+.+
T Consensus 64 ~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~ 143 (295)
T PRK11689 64 LLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLS 143 (295)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccch
Confidence 34445556777788887775 46888899999999999999999999999999999999999999998876543110
Q ss_pred CCC-CcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccch
Q psy11593 235 ARP-ADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYT 313 (400)
Q Consensus 235 ~~~-~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~ 313 (400)
..+ +....+...|+++++++++++|++.++.||..++.+. .. ......+..+ .+.... +++.. ...+
T Consensus 144 ~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~---~~~~~~~~~l-~~~~~~-~~~~~------~~~~ 211 (295)
T PRK11689 144 LAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-IT---LFFILTALAL-WIKYFL-SPQPA------MVFS 211 (295)
T ss_pred hhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hh---HHHHHHHHHH-HHHHHH-hcCcc------ccCC
Confidence 000 0011133569999999999999999999998655432 11 1111122222 221122 21111 0112
Q ss_pred HHHHHHHH----HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 314 WFIVFLVL----LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 314 ~~~~l~i~----~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
...|..+. ..+++..+..+.+|+.++...+...++.|+++.+++++++||+++..+++|+++|+.|+++.....+
T Consensus 212 ~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 212 LPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 22222222 2334455567788999999999999999999999999999999999999999999999876654443
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.89 E-value=1.9e-20 Score=181.65 Aligned_cols=277 Identities=10% Similarity=-0.047 Sum_probs=196.4
Q ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccC
Q psy11593 73 SRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQN 152 (400)
Q Consensus 73 ~~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~ 152 (400)
|.++.++++.+++.++.|+++...+|+..+ ++++...+++|.++..++.+++..+.+. +. +
T Consensus 7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~~-----~~~~~~~~~~R~~~a~l~l~~~~~~~~~-~~-------------~ 67 (293)
T PRK10532 7 KLPVWLPILLLLIAMASIQSGASLAKSLFP-----LVGAPGVTALRLALGTLILIAIFKPWRL-RF-------------A 67 (293)
T ss_pred ccccchHHHHHHHHHHHHHhhHHHHHHHHH-----HcCHHHHHHHHHHHHHHHHHHHHhHHhc-cC-------------C
Confidence 345677789999999999999999999875 2588889999988876665544322211 11 1
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccc
Q psy11593 153 PLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVV 232 (400)
Q Consensus 153 ~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~ 232 (400)
++++......|+++...+.+.++|++++|++.+.++.++.|+++++++. ||.++.+ ++.++++|+.++..++.+
T Consensus 68 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~--~~~i~~~Gv~li~~~~~~ 141 (293)
T PRK10532 68 KEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFV--WVVLAVLGLWFLLPLGQD 141 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHH--HHHHHHHHHheeeecCCC
Confidence 2333345566777888889999999999999999999999999998863 5555544 466789999887644322
Q ss_pred ccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhcccccc-
Q psy11593 233 EKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYN- 311 (400)
Q Consensus 233 ~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~- 311 (400)
. ......|+++.+++++++|++.++.||..++.+. .....+. ..+.+...+.....++. ..++.
T Consensus 142 ~-------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~--~~~~~~~-~~~~~~l~~~~~~~~~~-----~~~~~~ 206 (293)
T PRK10532 142 V-------SHVDLTGAALALGAGACWAIYILSGQRAGAEHGP--ATVAIGS-LIAALIFVPIGALQAGE-----ALWHWS 206 (293)
T ss_pred c-------ccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc--hHHHHHH-HHHHHHHHHHHHHccCc-----ccCCHH
Confidence 1 1234579999999999999999999998765532 2222322 33333333322222111 00111
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593 312 -YTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 312 -~~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~ 389 (400)
+....++.++.+.++..+..+.+++.++...+...+++|+++.++|++++||+++..+++|+++|++|+..+.+..++
T Consensus 207 ~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 207 ILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 111234444555566667778889999999999999999999999999999999999999999999999887655433
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.89 E-value=7.9e-21 Score=180.31 Aligned_cols=256 Identities=11% Similarity=0.097 Sum_probs=183.2
Q ss_pred hhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhh-HHHHHHHHH
Q psy11593 90 NAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKV-GVPALLYVI 168 (400)
Q Consensus 90 ~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~i~a~l~~~ 168 (400)
|+.+.+.+|++-+. ..++..+.+.|-+...++..+...++ . + + +++..+ ...+++..+
T Consensus 1 Wg~~~~~~k~~~~~----~~~~~~~~~~r~~~~~l~l~~~~~~~-~-~-~--------------~~~~~~~~~~~~~~~l 59 (260)
T TIGR00950 1 WGTTGVVIGQYLEG----QVPLYFAVFRRLIFALLLLLPLLRRR-P-P-L--------------KRLLRLLLLGALQIGV 59 (260)
T ss_pred CcchHHHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHHhc-c-C-H--------------hHHHHHHHHHHHHHHH
Confidence 67888889997642 23666677777666555444433222 1 1 1 222233 444456789
Q ss_pred HHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHH
Q psy11593 169 QNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGF 248 (400)
Q Consensus 169 ~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~ 248 (400)
++.+.++|++++|+++.+++.++.|+++++++++++|||++++||.++.++++|++++..++.. .....|+
T Consensus 60 ~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~---------~~~~~G~ 130 (260)
T TIGR00950 60 FYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL---------SINPAGL 130 (260)
T ss_pred HHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc---------cccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988654321 2346799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchH--HHHHHHHHHHHH
Q psy11593 249 AATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTW--FIVFLVLLNASG 326 (400)
Q Consensus 249 l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~--~~~l~i~~~al~ 326 (400)
.++++++++++.+.++.|+..++.+.+....+......+.++..+.....+.+. ..+..++ ..+..++...++
T Consensus 131 ~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 205 (260)
T TIGR00950 131 LLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-----QALSLQWGALLYLGLIGTALA 205 (260)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987765433222222223344444433332222111 0111111 122223334556
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHH
Q psy11593 327 GLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSV 380 (400)
Q Consensus 327 g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv 380 (400)
..+..+.+|+.++...+...+++|+++.+++++++||+++..+++|.++++.|+
T Consensus 206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 666777889999999999999999999999999999999999999999999885
No 15
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.89 E-value=2.3e-22 Score=187.28 Aligned_cols=221 Identities=42% Similarity=0.603 Sum_probs=195.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCC
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPA 238 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~ 238 (400)
+.+|+..|+.+|.+.++++.+.++...+.. +.+.+.++++.+..++++++..||.++.....|+..++.++..+ ..
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~---~~ 77 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA---KT 77 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc---cc
Confidence 478999999999999999999999999999 99999999999999999999999999999999999887654321 01
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHH
Q psy11593 239 DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVF 318 (400)
Q Consensus 239 ~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l 318 (400)
...++...|..+++.++++++++++|.|+..|+++...+.+++++.+++.+.........+++.....+++++++...|.
T Consensus 78 ~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (222)
T TIGR00803 78 LMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI 157 (222)
T ss_pred cccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH
Confidence 12246678999999999999999999999988877788999999999998876555555555555566777888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593 319 LVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY 383 (400)
Q Consensus 319 ~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly 383 (400)
.++.+++++.++++++|+.|++.++++..++++++.++|+++|||+++..+++|+.+|+.|+++|
T Consensus 158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 99999999999999999999999999999999999999999999999999999999999998876
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.83 E-value=1.9e-18 Score=166.63 Aligned_cols=271 Identities=13% Similarity=0.074 Sum_probs=173.5
Q ss_pred HHHHHHHHHHhhHHHHHHH-HccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHh-cCCchhhhHHHhhhhcccCcccch
Q psy11593 80 TTSLITLTLQNAIVSLSMR-YARMKNKDELFISSTGVLMAEVVKLVVCLGLVFAD-EGFHVGRFINLVRAHTIQNPLDTL 157 (400)
Q Consensus 80 ~l~l~ll~~~~~~~~l~~k-~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~-~~~~~~~~~~~l~~~~~~~~~~~~ 157 (400)
.++-++.++.++...++.| .++++ ++.+ +.......++.+++.... .+...+. .+++++
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~------~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~ 63 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE------PDFL--WWALLAHSVLLTPYGLWYLAQVGWSR-----------LPATFW 63 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch------hHHH--HHHHHHHHHHHHHHHHHhcccCCCCC-----------cchhhH
Confidence 3455667788888888888 44432 2222 222233322233322221 1111110 112223
Q ss_pred -hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCC
Q psy11593 158 -KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKAR 236 (400)
Q Consensus 158 -~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~ 236 (400)
.....++....+..+.+.|+++.|++..+.+.++.|+++++++++++|||+++++|+|+++++.|++++..++..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---- 139 (281)
T TIGR03340 64 LLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA---- 139 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc----
Confidence 345566678899999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHH-HHHHH---hhcCchhhhccccccc
Q psy11593 237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCA-ACTCF---ISDWDKIFQHGFFYNY 312 (400)
Q Consensus 237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~-l~~~~---~~~~~~i~~~~~~~~~ 312 (400)
.....|+.+.++++++++++.++.|+..++.+.. ........++.... .+... ..++...... ...+
T Consensus 140 -----~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 210 (281)
T TIGR03340 140 -----QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAF--YSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPY--ARQI 210 (281)
T ss_pred -----ccchhHHHHHHHHHHHHHHhhhhccccccchhcc--cccHHHHHHHHHHHHHHHHHHHHHHhccchhhh--HHHH
Confidence 1223577788999999999999877654332211 01111111221111 11111 1111110000 0000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593 313 TWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL 382 (400)
Q Consensus 313 ~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l 382 (400)
-...+...+..+++..+..+.+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+++
T Consensus 211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 0112233334445556666778888888888888999999999999999999999999999999999875
No 17
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.82 E-value=5.8e-17 Score=154.95 Aligned_cols=283 Identities=18% Similarity=0.179 Sum_probs=191.0
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcc
Q psy11593 75 AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPL 154 (400)
Q Consensus 75 ~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~ 154 (400)
.........++..+.|+......|...+. ..+.....+.+.+....+..+...+... ... +..+
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~ 67 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVES----LDPFLFAAALRFLIAALLLLPLLLLEPR-GLR-----------PALR 67 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcc----cCChHHHHHHHHHHHHHHHHHHHHhhcc-ccc-----------cccc
Confidence 34556666777778899998888876642 2244555555666555542222222110 000 0111
Q ss_pred c-chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHH-HHhcCCccHHHHHHHHHHHHhhheeeccccc
Q psy11593 155 D-TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAI-ILLKKKISKIQWISLVILVVGVALVQLSSVV 232 (400)
Q Consensus 155 ~-~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~-~~L~erls~~qwlal~l~~~GVviv~~~~~~ 232 (400)
+ ++.....++.....+.+.+.++++++++..+++.++.|++++++++ +++|||+++++|.+++++++|++++..++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 68 PWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 2 2335666677889999999999999999999999999999999997 7779999999999999999999999887664
Q ss_pred ccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccc
Q psy11593 233 EKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNY 312 (400)
Q Consensus 233 ~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~ 312 (400)
.. .. ...|+++.+++++++|++.++.|+.. +.+........++ .+...........+.. .......+
T Consensus 148 ~~------~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 214 (292)
T COG0697 148 GG------IL-SLLGLLLALAAALLWALYTALVKRLS-RLGPVTLALLLQL--LLALLLLLLFFLSGFG---APILSRAW 214 (292)
T ss_pred ch------hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHH--HHHHHHHHHHHhcccc---ccCCHHHH
Confidence 21 01 57899999999999999999999887 3221111110111 1111111111111111 00001111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593 313 TWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 313 ~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
....+..++..+++..+..+.++..++...+...+..++++.+++++++||+++..+++|+++++.|+.+...+
T Consensus 215 ~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 215 LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 12223333333455666677888999988888889999999999999999999999999999999999888766
No 18
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.81 E-value=2.7e-17 Score=156.31 Aligned_cols=250 Identities=12% Similarity=0.106 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc-ch
Q psy11593 79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD-TL 157 (400)
Q Consensus 79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~-~~ 157 (400)
++++.++.++.|+.+.+.+|+..+ +++.++++.|.++..++-+++....++ .++..++.++ .++++ +.
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~~~~------~~~~~i~~~R~~~a~~~l~~~~~~~~~--~~~~~~~~~~---~~~~~~~~ 71 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKLLKP------LPATDILGHRMIWSFPFMLLSVTLFRQ--WAALIERLKR---IQKRPLIL 71 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHHcc--hHHHHHHHhC---cccchHHH
Confidence 567788888999999999998432 588999999999876554443333222 1110111111 01122 33
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCC
Q psy11593 158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARP 237 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~ 237 (400)
.....+++..+++.+.++|++++++++++++.++.|+++++++++++|||++++||++++++++|++++..++.+
T Consensus 72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~----- 146 (256)
T TIGR00688 72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS----- 146 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC-----
Confidence 467778888999999999999999999999999999999999999999999999999999999999987543211
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH
Q psy11593 238 ADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV 317 (400)
Q Consensus 238 ~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 317 (400)
.. .+++++++++|++.++.||..++ +.. +.........++........++..... ......+.+
T Consensus 147 -----~~----~~~l~aa~~~a~~~i~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 210 (256)
T TIGR00688 147 -----LP----WEALVLAFSFTAYGLIRKALKNT-DLA---GFCLETLSLMPVAIYYLLQTDFATVQQ---TNPFPIWLL 210 (256)
T ss_pred -----ch----HHHHHHHHHHHHHHHHHhhcCCC-Ccc---hHHHHHHHHHHHHHHHHHHhccCcccc---cCchhHHHH
Confidence 11 24678999999999998886432 211 111101111122221111112211000 011112222
Q ss_pred HH--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy11593 318 FL--VLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYL 360 (400)
Q Consensus 318 l~--i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~ll 360 (400)
+. .+..+++..+....+|+.++...+...+++|+++.++++++
T Consensus 211 l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 211 LVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 22 12345566777788999999999999999999999999764
No 19
>KOG4510|consensus
Probab=99.78 E-value=1e-19 Score=167.39 Aligned_cols=281 Identities=16% Similarity=0.142 Sum_probs=188.2
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc
Q psy11593 76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD 155 (400)
Q Consensus 76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 155 (400)
.-.+.+++.+.-++.+++++..|..... |-.....|-++.+++..++....+..-..+ ...|.
T Consensus 36 p~~gl~l~~vs~ff~~~~vv~t~~~e~~-------p~e~a~~r~l~~mlit~pcliy~~~~v~gp----------~g~R~ 98 (346)
T KOG4510|consen 36 PNLGLLLLTVSYFFNSCMVVSTKVLEND-------PMELASFRLLVRMLITYPCLIYYMQPVIGP----------EGKRK 98 (346)
T ss_pred CccCceehhhHHHHhhHHHhhhhhhccC-------hhHhhhhhhhhehhhhheEEEEEeeeeecC----------CCcEE
Confidence 3445556666667788888888776653 333444455566666666543322100000 00122
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593 156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA 235 (400)
Q Consensus 156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~ 235 (400)
+ +..+++..+.+..+.|+|++|++.+++.++..+.|.+|++++|.+|||+.|+..-++..+.+.||+++..|+..-++
T Consensus 99 ~--LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~ 176 (346)
T KOG4510|consen 99 W--LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGD 176 (346)
T ss_pred E--EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCC
Confidence 2 46778888888899999999999999999999999999999999999999999999999999999999888642211
Q ss_pred ---CCCccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHh-hcCchhhhccccc
Q psy11593 236 ---RPADFV-ENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFI-SDWDKIFQHGFFY 310 (400)
Q Consensus 236 ---~~~~~~-~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~-~~~~~i~~~~~~~ 310 (400)
+.+.+. ....+|.+..+.++++.|-..++.|++.|+-+...-+.+ +...+.+.+++.... .+++ +...
T Consensus 177 ~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsy--f~~i~lV~s~I~~~~ig~~~-lP~c---- 249 (346)
T KOG4510|consen 177 TTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSY--FSLITLVVSLIGCASIGAVQ-LPHC---- 249 (346)
T ss_pred CccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehH--HHHHHHHHHHHHHhhcccee-cCcc----
Confidence 111111 345678888899999988888889988787653221111 223344444443321 1111 1001
Q ss_pred cchHHHHHHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593 311 NYTWFIVFLVL-LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL 382 (400)
Q Consensus 311 ~~~~~~~l~i~-~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l 382 (400)
+-+++.+..+. ...++++++...+..-.+-..++..+..++++.++.+++|+|.|++|.|+|+++|+.++..
T Consensus 250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~ 322 (346)
T KOG4510|consen 250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW 322 (346)
T ss_pred ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence 11222111222 2345667776666555555667889999999999999999999999999999999998643
No 20
>KOG1581|consensus
Probab=99.77 E-value=2.8e-16 Score=147.53 Aligned_cols=270 Identities=13% Similarity=0.136 Sum_probs=208.2
Q ss_pred CCCcch-HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChH
Q psy11593 105 KDELFI-SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAA 183 (400)
Q Consensus 105 ~~~~~~-~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s 183 (400)
++++|- +.-.+|.+.+..++.+..++...+. .. ..+..++.|...++...+...+.|.|++|++-+
T Consensus 44 ~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~-~~------------~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyP 110 (327)
T KOG1581|consen 44 DGERFEHSLFLVFCQRLVALLVSYAMLKWWKK-EL------------SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYP 110 (327)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhcccc-cC------------CCCCchhHHhHHHHHhhcchHHHHHHHHhccch
Confidence 456775 4445788888888888555543322 11 123456678889999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy11593 184 TSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGV 263 (400)
Q Consensus 184 ~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V 263 (400)
+..+..++|.+.++++..++.|+|+++.++++.++..+||.+....+.+++ ..+..+.+..+|+.++...-++.|+.+.
T Consensus 111 tq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s-~~~~g~~ns~~G~~Ll~~~L~fDgfTn~ 189 (327)
T KOG1581|consen 111 TQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDS-SSKSGRENSPIGILLLFGYLLFDGFTNA 189 (327)
T ss_pred HHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCC-ccccCCCCchHhHHHHHHHHHHHhhHHh
Confidence 999999999999999999999999999999999999999998876544331 2223345788999999999999999999
Q ss_pred HHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH---HHHHHHHHHHHHHHHHHHhhhhH
Q psy11593 264 YFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV---FLVLLNASGGLIVAVVVKYADNI 340 (400)
Q Consensus 264 ~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~---l~i~~~al~g~~~~~~~k~~~ai 340 (400)
.++++.|....+.+.....+..++.+.+.... +..+.....-.|...++...+ +.-.+.++|+..+.+.++..+++
T Consensus 190 tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~l-i~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGsl 268 (327)
T KOG1581|consen 190 TQDSLFKKYKVSSLHMMFGVNLFSAILNGTYL-ILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSL 268 (327)
T ss_pred HHHHHhccCCccHhHHHHHHHHHHHHHHHHhh-hcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccH
Confidence 99999998877776666666677777666553 233321111122222233333 23345677888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593 341 LKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 341 ~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~ 389 (400)
+-....+.+-++++++|.+.||+++++.|++|..+|..|+++-...+++
T Consensus 269 t~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 269 TFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999876655554
No 21
>KOG1580|consensus
Probab=99.77 E-value=8.7e-18 Score=152.04 Aligned_cols=262 Identities=14% Similarity=0.077 Sum_probs=191.9
Q ss_pred CCcch-HHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHHHHHHHHHHHHhhcCChHH
Q psy11593 106 DELFI-SSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLYVIQNNLLYISASNLDAAT 184 (400)
Q Consensus 106 ~~~~~-~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~ 184 (400)
+++|. .-+.||++....-+.+-.++...++.+. +..+.+.|+..++.|.+++.....|++++|.++
T Consensus 47 ~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~-------------D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPT 113 (337)
T KOG1580|consen 47 IEKFTFALALVFFQCTANTVFAKVLFLIRKKTEI-------------DNTPTKMYAACSASYLLAMVSSNQALQYVPYPT 113 (337)
T ss_pred hheehHHHHHHHHHHHHHHHHHHhheeecccccc-------------cCCcchHHHHHHHHHHHHHHhccchhcccCCcH
Confidence 35565 3455677666655555433322221111 123445689999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHH
Q psy11593 185 SQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVY 264 (400)
Q Consensus 185 ~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~ 264 (400)
..+-.+++|+.+.++.+++.+++++|+++.++++.++||++....+...+ +..+.....|.++.+++-.+.|+.++.
T Consensus 114 qVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~---g~e~~t~g~GElLL~lSL~mDGlTg~~ 190 (337)
T KOG1580|consen 114 QVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG---GAEDKTFGFGELLLILSLAMDGLTGSI 190 (337)
T ss_pred HHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC---CCcccccchHHHHHHHHHHhcccchhH
Confidence 99999999999999999999999999999999999999999987754211 112345678999999999999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHH---HHHHHHHHHHHHHHHHHHhhhhHH
Q psy11593 265 FEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIV---FLVLLNASGGLIVAVVVKYADNIL 341 (400)
Q Consensus 265 ~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~---l~i~~~al~g~~~~~~~k~~~ai~ 341 (400)
++|+-+.+.....-....+.+|+.+....+++ ..|+..+-..|-+.++...| +..+..++|+.++...+.+.++..
T Consensus 191 Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~l-fTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLt 269 (337)
T KOG1580|consen 191 QDRIRASYQRTGTSMMFYTNLWSTLYLGAGLL-FTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLT 269 (337)
T ss_pred HHHHHHhhccCchhhHHHHHHHHHHHhhhhhe-ehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCee
Confidence 99987765433333334456677766555443 23332211112222333223 223456778888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 342 KGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 342 ~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
.++.++.+..|+++.|+++|+++++..||+|..+|..|...=.
T Consensus 270 CSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 270 CSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred EEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999999999999999999999876433
No 22
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.66 E-value=1.6e-13 Score=129.05 Aligned_cols=274 Identities=18% Similarity=0.215 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
.-+++..+..-+.|+..+...|+.... ++.++.--|-+-.+.+.+.++...++ .+. +++ ..++||.+
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~~------~~~eIlahRviwS~~~~l~ll~~~r~--~~~----~~~-~~~~p~~~ 72 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEPL------PATEILAHRVIWSFPFMLALLFLLRQ--WRE----LKQ-LLKQPKTL 72 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHccC------CHHHHHHHHHHHHHHHHHHHHHHHhh--hHH----HHH-HHhCcHHH
Confidence 345677777788899999999997753 55566655555555444444443332 121 122 33577888
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCC
Q psy11593 157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKAR 236 (400)
Q Consensus 157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~ 236 (400)
..+.+.+++...++.++.+|..+-..-++++-+...|++..+++.+|+|||+++.||++++++.+||..-.....+
T Consensus 73 ~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~---- 148 (293)
T COG2962 73 LMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS---- 148 (293)
T ss_pred HHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC----
Confidence 8788888999999999999999999999999999999999999999999999999999999999999877554332
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHhHHHHHHHHHH-hhcCchhhhccccc-cch
Q psy11593 237 PADFVENRMLGFAATILACLLSGLAGVYFEMILKGSD-VSIWMRNVQLSLLSLPCAACTCF-ISDWDKIFQHGFFY-NYT 313 (400)
Q Consensus 237 ~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~-~~~~~~~~~l~~~g~~~~l~~~~-~~~~~~i~~~~~~~-~~~ 313 (400)
-.... +.=|+.+++++. .||.+|-.+ .+.....+.+ . +.+++..+ ..+... +.. ..+
T Consensus 149 ------lpwva----l~la~sf~~Ygl-~RK~~~v~a~~g~~lE~l~l---~-p~al~yl~~l~~~~~-----~~~~~~~ 208 (293)
T COG2962 149 ------LPWVA----LALALSFGLYGL-LRKKLKVDALTGLTLETLLL---L-PVALIYLLFLADSGQ-----FLQQNAN 208 (293)
T ss_pred ------CcHHH----HHHHHHHHHHHH-HHHhcCCchHHhHHHHHHHH---h-HHHHHHHHHHhcCch-----hhhcCCc
Confidence 22333 344577888776 555555432 2222222222 2 22222222 222221 111 112
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593 314 WFIVFLVLL---NASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP 387 (400)
Q Consensus 314 ~~~~l~i~~---~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~ 387 (400)
...++.+.. .++.-.+.+..-|..+-.+.++..|.+|..-.+++++++||+++..++++.+.|-.|+.+|..+.
T Consensus 209 ~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 209 SLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred hHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222 23333344455577888888999999999999999999999999999999999999999887654
No 23
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.60 E-value=1.1e-12 Score=127.08 Aligned_cols=270 Identities=9% Similarity=0.018 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593 79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK 158 (400)
Q Consensus 79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 158 (400)
.++..++.++.|++..+..|.... .++.+.+ +..+..++...+....+..+ .. .++-+..
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~g------~~~~~~~--~~~~g~l~~~~~~~~~~~~~-~~-----------~~~~~~~ 61 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIGG------GPYSQTL--GTTFGALILSIAIAIFVLPE-FW-----------ALSIFLV 61 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccCC------CHHHHHH--HHHHHHHHHHHHHHHHhCCc-cc-----------ccHHHHH
Confidence 456677788999999999998652 1333333 22223222222222211100 00 1111112
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhh-hhHHHHHHHHHHHhcCCccHHH----HHHHHHHHHhhheeecccccc
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQ-LKILTTAIFAIILLKKKISKIQ----WISLVILVVGVALVQLSSVVE 233 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~-~~pl~tal~s~~~L~erls~~q----wlal~l~~~GVviv~~~~~~~ 233 (400)
-.+.+++....|.+++.+.++++.+.+..+.+ +.+++.++++.+++|||.++++ ++|+++.++|++++...+.++
T Consensus 62 g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~ 141 (290)
T TIGR00776 62 GLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKS 141 (290)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccc
Confidence 34556678999999999999999999999999 9999999999999999999999 999999999999986654321
Q ss_pred cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHH---HHHHHHHhHHHHHHHHHHhhcCchhhhccccc
Q psy11593 234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWM---RNVQLSLLSLPCAACTCFISDWDKIFQHGFFY 310 (400)
Q Consensus 234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~---~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~ 310 (400)
. +++...+...|+++.++++++++++.+..|+. + .+ +... +..-+...+.++..+. .+.+ . +.
T Consensus 142 ~--~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~---~~~~-----~-~~ 207 (290)
T TIGR00776 142 A--GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGH---ILAK-----P-LK 207 (290)
T ss_pred c--ccccccchhhHHHHHHHHHHHHHHHHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHH---hccc-----c-hH
Confidence 1 00000233569999999999999999988865 2 22 1111 2111222222222211 0000 0 11
Q ss_pred cchHHHHHHHH---HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHH----HHHHHHHHHHHH
Q psy11593 311 NYTWFIVFLVL---LNASGGLIVAVVVK-YADNILKGFATSLAIVLACVFQVYLFAFVITFQFI----VGAFFVMCSVFL 382 (400)
Q Consensus 311 ~~~~~~~l~i~---~~al~g~~~~~~~k-~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~l----iG~~lVi~gv~l 382 (400)
+...|..++ ..+++..++....+ +.++......++.+++.++++++++++|..+..++ +|.++|+.|+.+
T Consensus 208 --~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l 285 (290)
T TIGR00776 208 --KYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI 285 (290)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence 112221111 12334444444456 78888888999999999999999999999999999 999999999876
Q ss_pred hc
Q psy11593 383 YS 384 (400)
Q Consensus 383 y~ 384 (400)
-.
T Consensus 286 ~~ 287 (290)
T TIGR00776 286 LG 287 (290)
T ss_pred Hh
Confidence 43
No 24
>KOG1441|consensus
Probab=99.58 E-value=9.1e-15 Score=141.49 Aligned_cols=225 Identities=20% Similarity=0.214 Sum_probs=167.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593 156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA 235 (400)
Q Consensus 156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~ 235 (400)
+......|+.+++...+...++++.|.+.+|++..+.|+++.++++++.+|+.++.-|+++.....||.+....+.
T Consensus 83 ~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---- 158 (316)
T KOG1441|consen 83 LRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---- 158 (316)
T ss_pred hHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc----
Confidence 3446778999999999999999999999999999999999999999999999999999999999999999876443
Q ss_pred CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHH--HHHHhHHHHHH-HHHHhhcCchhhhccccccc
Q psy11593 236 RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNV--QLSLLSLPCAA-CTCFISDWDKIFQHGFFYNY 312 (400)
Q Consensus 236 ~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~--~l~~~g~~~~l-~~~~~~~~~~i~~~~~~~~~ 312 (400)
.....|++.++.+.+..++..++.++++++++.+..-.+. .+...+..+.+ +.....+++.. .......+
T Consensus 159 ------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~ 231 (316)
T KOG1441|consen 159 ------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPW 231 (316)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeecccc
Confidence 2567999999999999999999999999654333222222 12223333333 32223333322 00011122
Q ss_pred hHHHHHHHHHH---HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593 313 TWFIVFLVLLN---ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 313 ~~~~~l~i~~~---al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~ 389 (400)
+...+..++.+ -..+.....++...++++-+.+..+..++.++.||++|+++.|+.+.+|.++.++|+++|++.+.+
T Consensus 232 ~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~ 311 (316)
T KOG1441|consen 232 FVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK 311 (316)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 22222222222 123344456778888888888888888899999999999999999999999999999999987765
Q ss_pred CC
Q psy11593 390 KP 391 (400)
Q Consensus 390 ~~ 391 (400)
..
T Consensus 312 ~~ 313 (316)
T KOG1441|consen 312 EK 313 (316)
T ss_pred hh
Confidence 44
No 25
>KOG1443|consensus
Probab=99.50 E-value=3.4e-12 Score=120.22 Aligned_cols=294 Identities=16% Similarity=0.116 Sum_probs=190.5
Q ss_pred hHhhhhHHHHHHHHHHHHHhhHHHHHHHHccccC-CCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhc
Q psy11593 71 AQSRAFMLKTTSLITLTLQNAIVSLSMRYARMKN-KDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHT 149 (400)
Q Consensus 71 ~~~~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~-~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~ 149 (400)
++.+......+.++ +.|=.-++..++..+.. .+.+|| --++-+..+++++.+.......+.+..+.. .
T Consensus 8 ~~~~~~rV~~L~lV---l~yY~~Si~Ltf~~~~~~~~f~fP-Lf~ts~h~~v~flfa~~~~~l~~~~~~r~r-------~ 76 (349)
T KOG1443|consen 8 NQFLMNRVLTLALV---LLYYFLSIGLTFYFKWLTKNFHFP-LFVTSLHLAVKFLFAALSRRLYQCSVPRAR-------V 76 (349)
T ss_pred hHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhhhcCcCCc-hHHHHHHHHHHHHHHHHHHHHHhccCCccc-------c
Confidence 44444443333333 44444444447766542 133444 335566777888887765543332122210 1
Q ss_pred ccCcccchh-hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593 150 IQNPLDTLK-VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL 228 (400)
Q Consensus 150 ~~~~~~~~~-~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~ 228 (400)
..+|++.++ +++-|+.-+..-.+..++++|++.+.|++..++.|+|+.+|+.+|-=||.+|.-...+++..+|+.+...
T Consensus 77 ~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~ 156 (349)
T KOG1443|consen 77 VLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTY 156 (349)
T ss_pred CCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEe
Confidence 124445444 4566777888899999999999999999999999999999999997799999999999999999999987
Q ss_pred ccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCC---chHHHHHHHHHHhHHHHHHHHHHhhcCchhh-
Q psy11593 229 SSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSD---VSIWMRNVQLSLLSLPCAACTCFISDWDKIF- 304 (400)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~---~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~- 304 (400)
++.+ ....|+.+++++++++|+...+.++++++.+ ..+.....++..+..+..++..+..+|....
T Consensus 157 KsTq----------f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~ 226 (349)
T KOG1443|consen 157 KSTQ----------FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT 226 (349)
T ss_pred cccc----------eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch
Confidence 7543 5678999999999999999999999998754 1111111222222222223322333443221
Q ss_pred hccccccchH-HHHHHHHHHHHHHHHHHHHH--------HhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHH
Q psy11593 305 QHGFFYNYTW-FIVFLVLLNASGGLIVAVVV--------KYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFF 375 (400)
Q Consensus 305 ~~~~~~~~~~-~~~l~i~~~al~g~~~~~~~--------k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~l 375 (400)
....|+..+. ..+.++...+++|.+ ++++ ...+.+..+++.-+.-+.+.+++..+.+++++..-++|..+
T Consensus 227 ~s~~f~~~d~~~~~rv~g~i~l~g~l-aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i 305 (349)
T KOG1443|consen 227 SSSIFRFQDTGLILRVIGLISLGGLL-AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAI 305 (349)
T ss_pred hhhHHHhcCccHHHHHHHHHHHHHHH-HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHH
Confidence 2222222221 234444444445533 2222 23455555666667778899999999999999999999999
Q ss_pred HHHHHHHhccC
Q psy11593 376 VMCSVFLYSRT 386 (400)
Q Consensus 376 Vi~gv~ly~~~ 386 (400)
...|+.+|..+
T Consensus 306 ~~agi~~~~~~ 316 (349)
T KOG1443|consen 306 CLAGILLHRNE 316 (349)
T ss_pred HHHHHHHhccC
Confidence 99999999554
No 26
>KOG2765|consensus
Probab=99.46 E-value=4e-12 Score=122.77 Aligned_cols=221 Identities=15% Similarity=0.152 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcc
Q psy11593 161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF 240 (400)
Q Consensus 161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~ 240 (400)
.-+.+-+++|+....|+.+.+++..+++.++.-+||..++.+|.+||+++.+.+++++.+.||+++...+..++ ++..
T Consensus 164 ~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~--~~~~ 241 (416)
T KOG2765|consen 164 FFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN--SDLP 241 (416)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc--ccCC
Confidence 33556789999999999999999999999999999999999999999999999999999999999987765321 1123
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHH---HHHhhcCchhhhccccccchHHHH
Q psy11593 241 VENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAAC---TCFISDWDKIFQHGFFYNYTWFIV 317 (400)
Q Consensus 241 ~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~---~~~~~~~~~i~~~~~~~~~~~~~~ 317 (400)
......|.++.+++|+++|++.+..+|-..+++....++ +.+++.|..-.++ ..++.+.-..+. |.-.+....
T Consensus 242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~-lffGfvGLfnllllwP~l~iL~~~~~e~---F~lP~~~q~ 317 (416)
T KOG2765|consen 242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQ-LFFGFVGLFNLLLLWPPLIILDFFGEER---FELPSSTQF 317 (416)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHH-HHHHHHHHHHHHHHhHHHHHHHHhccCc---ccCCCCcee
Confidence 345689999999999999999999998766654222222 3334444332222 222111100011 111111111
Q ss_pred HHHHHHHHHH-----HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593 318 FLVLLNASGG-----LIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP 387 (400)
Q Consensus 318 l~i~~~al~g-----~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~ 387 (400)
..++...+-+ .+.+..+-..++.+....-+++++++.+...++-|.++|+.+++|.+.|++|.++.+...
T Consensus 318 ~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 318 SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 1222222222 333344455677777777778899999999999999999999999999999988877653
No 27
>KOG1582|consensus
Probab=99.46 E-value=3.5e-12 Score=118.11 Aligned_cols=225 Identities=15% Similarity=0.094 Sum_probs=169.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccC
Q psy11593 156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKA 235 (400)
Q Consensus 156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~ 235 (400)
|.-|.+.+++....+.+..-++.|++.++..+...++.+.+.+.+.++=|+|+.+.++.+..+..+|++.....|...
T Consensus 106 ~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~-- 183 (367)
T KOG1582|consen 106 WRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT-- 183 (367)
T ss_pred hhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc--
Confidence 334899999999999999999999999999999999999999999999999999999999999999999998876643
Q ss_pred CCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHH
Q psy11593 236 RPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWF 315 (400)
Q Consensus 236 ~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 315 (400)
+......|..++-+|-++.|+-+-.+||.+|..+.+.....+.-+..|.++.+..+.. .++-.+...+...++..
T Consensus 184 ----sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvl-Tge~f~a~~fcaehp~~ 258 (367)
T KOG1582|consen 184 ----SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVL-TGELFSAWTFCAEHPVR 258 (367)
T ss_pred ----CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHh-cccchhhhHHHHhCcHh
Confidence 2345678999999999999999999999999765432111111223344444444432 33322223333333443
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593 316 IVFLVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP 387 (400)
Q Consensus 316 ~~l~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~ 387 (400)
++...+..++ |...+-..+|..++......++.+..+++++|+++|..++|..+.-|..+|+.|+++-.+++
T Consensus 259 tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 259 TYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 4444433332 33333345688889899999999999999999999999999999999999999999755544
No 28
>KOG1583|consensus
Probab=99.45 E-value=1.8e-13 Score=126.94 Aligned_cols=220 Identities=18% Similarity=0.243 Sum_probs=152.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc-CChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccccc-C
Q psy11593 158 KVGVPALLYVIQNNLLYISASN-LDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEK-A 235 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~-l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~-~ 235 (400)
.|++...+++..|.+..+|+.+ +|.+...++++..++.+.+++|+++|+|++.+|+.++++..+|+++.......+. +
T Consensus 66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 3777778888899999999988 9999999999999999999999999999999999999999999999865433211 0
Q ss_pred -----CCC---cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhc------C-
Q psy11593 236 -----RPA---DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISD------W- 300 (400)
Q Consensus 236 -----~~~---~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~------~- 300 (400)
+.+ .+.....+|+.+...+.+.+|..++|+|..+|+++. .|..++ ++.=.+.++..+... +
T Consensus 146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK-h~~Eal---FytH~LsLP~Flf~~~div~~~~ 221 (330)
T KOG1583|consen 146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGK-HWKEAL---FYTHFLSLPLFLFMGDDIVSHWR 221 (330)
T ss_pred hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHH---HHHHHhccchHHHhcchHHHHHH
Confidence 011 112234689999999999999999999999998753 222332 222222222222111 1
Q ss_pred -----ch--hhhccccccchHHHHHHHHHHHHHH-HHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhH
Q psy11593 301 -----DK--IFQHGFFYNYTWFIVFLVLLNASGG-LIVAVVV---KYADNILKGFATSLAIVLACVFQVYLFAFVITFQF 369 (400)
Q Consensus 301 -----~~--i~~~~~~~~~~~~~~l~i~~~al~g-~~~~~~~---k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~ 369 (400)
+. +...++. -+..|..++...+.+ .|+-.++ ...++...+...+++..++.++|+..|++++++++
T Consensus 222 ~~~~se~~~~p~~g~~---vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h 298 (330)
T KOG1583|consen 222 LAFKSESYLIPLLGFK---VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH 298 (330)
T ss_pred HHhcCcceeccccCcc---ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH
Confidence 10 0011111 123444444444433 2222222 12344555556677889999999999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q psy11593 370 IVGAFFVMCSVFLYS 384 (400)
Q Consensus 370 liG~~lVi~gv~ly~ 384 (400)
|+|+++|.+|..+|.
T Consensus 299 ~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 299 WLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998886
No 29
>KOG1444|consensus
Probab=99.44 E-value=2.5e-11 Score=115.71 Aligned_cols=283 Identities=17% Similarity=0.172 Sum_probs=182.6
Q ss_pred HHhhHHHHHHHHccccCCCCcchHHHHH-HHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHHH
Q psy11593 88 LQNAIVSLSMRYARMKNKDELFISSTGV-LMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALLY 166 (400)
Q Consensus 88 ~~~~~~~l~~k~s~~~~~~~~~~~~~~v-f~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l~ 166 (400)
+.-..+.+.-|+.-+ .++|+..-.+ +.+.+...++ +.+..+.+-.+.+++ +++..+++.+++++|
T Consensus 22 ~sS~lm~vvNK~vls---~y~f~~~l~l~~~Q~l~s~~~-v~~lk~~~lv~~~~l----------~~~~~kk~~P~~~lf 87 (314)
T KOG1444|consen 22 LSSILMTVVNKIVLS---SYNFPMGLLLMLLQSLASVLV-VLVLKRLGLVNFRPL----------DLRTAKKWFPVSLLF 87 (314)
T ss_pred HHHHHHHHHHHHHHh---cCCCcHHHHHHHHHHHHHHHH-HHHHHHhceeecCCc----------ChHHHHHHccHHHHH
Confidence 444556677788776 3566654443 4554443222 222222221112211 234455678889999
Q ss_pred HHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccccchh
Q psy11593 167 VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVENRML 246 (400)
Q Consensus 167 ~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~ 246 (400)
.+.......++++++.+++.+++...|+.+++....|+|.|.++.-|.+++...+|......++.. ....
T Consensus 88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s----------f~~~ 157 (314)
T KOG1444|consen 88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS----------FNLR 157 (314)
T ss_pred HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce----------ecch
Confidence 999999999999999999999999999999999999999999999999999999999887665543 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHH-hhcCchhhhccccccchHHHHHHHHHHHH
Q psy11593 247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCF-ISDWDKIFQHGFFYNYTWFIVFLVLLNAS 325 (400)
Q Consensus 247 G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~-~~~~~~i~~~~~~~~~~~~~~l~i~~~al 325 (400)
|..+++..+++.+...++.|+..+..+..-+-....-.+.+.+...+..+ ..|++++.. .+-...+...+..+..+.+
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~-~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL-NFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh-hcccccchhHHHHHHHHHH
Confidence 89999999999999999999988764321111111112234444444332 334332211 1111112334444445455
Q ss_pred HHHHHH----HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCCCCCCC
Q psy11593 326 GGLIVA----VVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSKPKPPR 395 (400)
Q Consensus 326 ~g~~~~----~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~~~~~~ 395 (400)
.|..+. ++.++.++..-..........+.+...+++|++.++.-++|..+-++|..+|+....++.+.+|
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~~ 310 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQPP 310 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCCC
Confidence 454443 3445556655555554444556666677779999999999999999999899887755544443
No 30
>KOG2766|consensus
Probab=99.31 E-value=8.6e-13 Score=121.20 Aligned_cols=215 Identities=14% Similarity=0.136 Sum_probs=159.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCC
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPA 238 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~ 238 (400)
|.+.|+.+.-+|++..-|.||++....+++-.-.+..+.+++|+|||.|+.+-|..|++++.+||+++..+|...++ .
T Consensus 81 Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd--~ 158 (336)
T KOG2766|consen 81 YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGD--R 158 (336)
T ss_pred hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccc--c
Confidence 78889999999999999999999999999999999999999999999999999999999999999999887654321 1
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHH
Q psy11593 239 DFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVF 318 (400)
Q Consensus 239 ~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l 318 (400)
....+...|+.+++++|-++|++++..|.+.|+-+. ....-+++++|.+++.+-.+. +..++.. -+|++....
T Consensus 159 aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~--~elm~~lgLfGaIIsaIQ~i~-~~~~~~t----l~w~~~i~~ 231 (336)
T KOG2766|consen 159 AGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR--VELMGFLGLFGAIISAIQFIF-ERHHVST----LHWDSAIFL 231 (336)
T ss_pred cCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH--HHHHHHHHHHHHHHHHHHHhh-hccceee----EeehHHHHH
Confidence 123467889999999999999999999999887653 222335678888888776433 3222211 123333322
Q ss_pred HHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593 319 LVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR 385 (400)
Q Consensus 319 ~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~ 385 (400)
.+. .++ ...+...++|..++..-+.....+-.++.++ ..||-+.+|...+..+.+..|.++|.-
T Consensus 232 yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 232 YLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred HHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 222 122 1222233445555555555555566677766 678888999999999999999999853
No 31
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.30 E-value=3.9e-09 Score=97.38 Aligned_cols=213 Identities=15% Similarity=0.041 Sum_probs=138.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccc
Q psy11593 154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVE 233 (400)
Q Consensus 154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~ 233 (400)
+++....+-|+.....|.++|.+++.+|.+++..+-++.|+.++++ ..||..-.-|+++. +.|+.++...+.+
T Consensus 69 ~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~----~sRr~~d~vwvaLA--vlGi~lL~p~~~~- 141 (292)
T COG5006 69 PQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALL----SSRRLRDFVWVALA--VLGIWLLLPLGQS- 141 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHH----hccchhhHHHHHHH--HHHHHhheeccCC-
Confidence 4455567778888899999999999999999999999999999875 57777777776665 4555554332221
Q ss_pred cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccch
Q psy11593 234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYT 313 (400)
Q Consensus 234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~ 313 (400)
.......|..+.+.++.||+.+-+.-+|.-+..+ .......-| ..+.++.++.-....+. .++ +
T Consensus 142 ------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm-~vAaviv~Pig~~~ag~-----~l~---~ 205 (292)
T COG5006 142 ------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGM-LVAALIVLPIGAAQAGP-----ALF---S 205 (292)
T ss_pred ------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHH-HHHHHHHhhhhhhhcch-----hhc---C
Confidence 1234568999999999999999888888764322 111111111 11222222211111111 122 1
Q ss_pred HHHHHHHHHHHH-----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 314 WFIVFLVLLNAS-----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 314 ~~~~l~i~~~al-----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
+......+..++ ...+=...++..+...-+...+++|.++.+.|++++||.+|..||+|.+.|+.+..-.+...+
T Consensus 206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 222222222222 222223355667766666777889999999999999999999999999999998765444444
Q ss_pred C
Q psy11593 389 S 389 (400)
Q Consensus 389 ~ 389 (400)
|
T Consensus 286 ~ 286 (292)
T COG5006 286 K 286 (292)
T ss_pred C
Confidence 3
No 32
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.04 E-value=3.7e-09 Score=87.81 Aligned_cols=134 Identities=16% Similarity=0.235 Sum_probs=107.8
Q ss_pred HHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhH
Q psy11593 81 TSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVG 160 (400)
Q Consensus 81 l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 160 (400)
++-++.+++++..+++.|.--+. .+|...-++|.++.+.++..+.+..++.... .+ -++|.+.-..
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~-----vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-------~~--~~~k~~lfli 71 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEG-----VDPDFATTIRTIVILIFLLIVLLVTGNWQAG-------GE--IGPKSWLFLI 71 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-----cCccHHHHHHHHHHHHHHHHHHHhcCceecc-------cc--cCcceehhhh
Confidence 44556678888899999986542 3666677888888888877777766541111 01 1456666567
Q ss_pred HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593 161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL 228 (400)
Q Consensus 161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~ 228 (400)
+.|+...+.+.++|.|++.-+++...-+..+.|+++++++++|||||++..+|+|+++..+|++++..
T Consensus 72 lSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 72 LSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 77788899999999999999999999999999999999999999999999999999999999998753
No 33
>KOG1442|consensus
Probab=99.02 E-value=2.1e-10 Score=106.70 Aligned_cols=218 Identities=15% Similarity=0.146 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcc
Q psy11593 161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADF 240 (400)
Q Consensus 161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~ 240 (400)
..++.+.+......+.++|.+.+.+++-+++.-+|+.++++++||+|-+..-..+.++.++|--+= .+.++ ..
T Consensus 107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG---vdqE~----~~ 179 (347)
T KOG1442|consen 107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG---VDQEG----ST 179 (347)
T ss_pred chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheec---ccccc----cc
Confidence 335556666677788999999999999999999999999999999999988776665555554321 11110 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Q psy11593 241 VENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLV 320 (400)
Q Consensus 241 ~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i 320 (400)
+.-...|.++.+.|++.-|+-.+|.+|.+...+...|...+....++.++.++.+.+ .|+--.-.+|.+.++.+.|...
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~l-nge~~~v~~~~~l~a~~Fw~~m 258 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLIL-NGEFQAVVGFPHLPAIKFWILM 258 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHH-cchHHHHcCcccchHHHHHHHH
Confidence 234568999999999999999999998776666678888888888887777665543 2321111334444567788888
Q ss_pred HHHHHHHHHHHHHH----HhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593 321 LLNASGGLIVAVVV----KYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 321 ~~~al~g~~~~~~~----k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
...++.|..+.++. |..++++.++..+..-..-.++++.+++|.-+..-|-|-.+|+.|...|++.
T Consensus 259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~v 328 (347)
T KOG1442|consen 259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLV 328 (347)
T ss_pred HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHH
Confidence 88888887777654 7778888888888888888999999999999999999999999999888754
No 34
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.02 E-value=5.5e-09 Score=86.90 Aligned_cols=76 Identities=21% Similarity=0.403 Sum_probs=66.0
Q ss_pred chhhHHHHHHH-HHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccc
Q psy11593 156 TLKVGVPALLY-VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVV 232 (400)
Q Consensus 156 ~~~~~i~a~l~-~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~ 232 (400)
+......+++. ..++.++++|+++.| +...++.++.|+++++++++++|||+++++|.++++.++|++++..++.+
T Consensus 34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 34 WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 33344445555 489999999999999 58889999999999999999999999999999999999999999877654
No 35
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.01 E-value=1.4e-08 Score=88.50 Aligned_cols=139 Identities=20% Similarity=0.250 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-----CchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhc--cccc-cc--hHHH
Q psy11593 247 GFAATILACLLSGLAGVYFEMILKGS-----DVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQH--GFFY-NY--TWFI 316 (400)
Q Consensus 247 G~l~~l~aa~~~al~~V~~ekllk~~-----~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~--~~~~-~~--~~~~ 316 (400)
|.++++.+.++.|+..++.|+++++. ..+.......+...+.++.++.++..|+....+. .... .. +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67889999999999999999999873 3334434444556666666665554443321111 0111 00 1222
Q ss_pred HHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593 317 VFLVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR 385 (400)
Q Consensus 317 ~l~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~ 385 (400)
+..++..++ .......++++.+++..+....+..++..++|+++|||++|..+++|.++.+.|+++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 333333232 333345678999999999999999999999999999999999999999999999999975
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.01 E-value=1.2e-08 Score=92.36 Aligned_cols=235 Identities=15% Similarity=0.154 Sum_probs=158.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccccccc
Q psy11593 155 DTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEK 234 (400)
Q Consensus 155 ~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~ 234 (400)
+...+.+++++.++..+...-+++|++.+.+++...+.++.+|.....++|.|++.....+.++.++.-++..++|....
T Consensus 67 ~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~ 146 (309)
T COG5070 67 KAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS 146 (309)
T ss_pred hhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH
Confidence 34456788888888888888899999999999999999999999999999999999999999999988887777665321
Q ss_pred CCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHH-HhhcCchhhhccccccc-
Q psy11593 235 ARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTC-FISDWDKIFQHGFFYNY- 312 (400)
Q Consensus 235 ~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~-~~~~~~~i~~~~~~~~~- 312 (400)
.........|.+++..-|+.++..-...||..|-.+..-.-..+.-...+.+..+... +.+||.+. +.-++.
T Consensus 147 ---~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~---n~annl~ 220 (309)
T COG5070 147 ---AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPG---NLANNLS 220 (309)
T ss_pred ---HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcc---hhhcCCC
Confidence 0011244578888899999888877777776653211000011111233444444333 34666532 112222
Q ss_pred -hHHHHHHHHHHHHHH--HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCC
Q psy11593 313 -TWFIVFLVLLNASGG--LIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSS 389 (400)
Q Consensus 313 -~~~~~l~i~~~al~g--~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~ 389 (400)
+...|+.+....-.| .+-+++.+..++..-+...++...-..+.|.++|||+.+...+....+=..+..+|...+.+
T Consensus 221 ~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 221 VDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred hHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234455443322222 22345667777777777777777788899999999999999998888877776777766555
Q ss_pred CCCCCC
Q psy11593 390 KPKPPR 395 (400)
Q Consensus 390 ~~~~~~ 395 (400)
+...||
T Consensus 301 k~q~q~ 306 (309)
T COG5070 301 KQQNQK 306 (309)
T ss_pred HHhcCC
Confidence 444444
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.95 E-value=4.9e-09 Score=87.33 Aligned_cols=122 Identities=18% Similarity=0.157 Sum_probs=93.9
Q ss_pred HhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHHHH-HH
Q psy11593 89 QNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPALL-YV 167 (400)
Q Consensus 89 ~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a~l-~~ 167 (400)
.|+...+..|...++ +++....+.+.+...+ .+.+....++.+... .+++++......+++ ..
T Consensus 2 ~~a~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 65 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK-----ISPLSITFWRFLIAGI-LLILLLILGRKPFKN----------LSPRQWLWLLFLGLLGTA 65 (126)
T ss_pred eeeeHHHHHHHHhcc-----CCHHHHHHHHHHHHHH-HHHHHHhhccccccC----------CChhhhhhhhHhhcccee
Confidence 467777788876642 5788888998888775 444333322211110 123444555666666 58
Q ss_pred HHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 168 IQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 168 ~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
+.+.+.++|+++++++..+++.++.|+++++++++++||++++++|.|+++.+.|++++
T Consensus 66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999875
No 38
>KOG4314|consensus
Probab=98.86 E-value=5.5e-08 Score=86.71 Aligned_cols=207 Identities=13% Similarity=0.228 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccccccCCCCcccc
Q psy11593 163 ALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSVVEKARPADFVE 242 (400)
Q Consensus 163 a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~~~ 242 (400)
+++.++.|+++..|+..++++.++.+..+.-.|+-+++++.||+|+...+.++.++...|++++.+.+.. +.
T Consensus 60 ~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~--------~a 131 (290)
T KOG4314|consen 60 SIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE--------HA 131 (290)
T ss_pred EEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch--------hh
Confidence 4567889999999999999999999999999999999999999999999999999999999999877654 35
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCC---CchHHHHHHHHHHhHHHHH----HHHHHhhcCchhhhccccccchHH
Q psy11593 243 NRMLGFAATILACLLSGLAGVYFEMILKGS---DVSIWMRNVQLSLLSLPCA----ACTCFISDWDKIFQHGFFYNYTWF 315 (400)
Q Consensus 243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~---~~~~~~~~~~l~~~g~~~~----l~~~~~~~~~~i~~~~~~~~~~~~ 315 (400)
...+|+..++.+++.+|++.|..++..... +.+.++.. +.++-..+. ++..+ ..-|+.. .+...
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~--LGF~NL~~~~~~~lIL~~-T~VE~~q------sFA~~ 202 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSC--LGFFNLCFISFPALILAF-TGVEHLQ------SFAAA 202 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHH--HHHHHHHHHhhhHHHHHH-hchHHHH------HHhhC
Confidence 678999999999999999999998877543 22222221 222222211 11111 1111111 01111
Q ss_pred HHHHHHHHHH----HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593 316 IVFLVLLNAS----GGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 316 ~~l~i~~~al----~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
.|.-.+..+. ....+.+-+-...++..+.-..++++..+.+..++-+-..+..++.|.++|..|..+.-.+
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP 277 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIP 277 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecc
Confidence 2222221111 2222223334445555555666667777888888777788889999999999997654433
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.70 E-value=1.1e-06 Score=83.46 Aligned_cols=217 Identities=14% Similarity=0.173 Sum_probs=140.2
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHH----HHHHHHHhhheeec
Q psy11593 154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWI----SLVILVVGVALVQL 228 (400)
Q Consensus 154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwl----al~l~~~GVviv~~ 228 (400)
+.++.-.+.+++..+.+..+|.+.+++..+...=+. ..+.+.++++++++++|--+..+|+ |+++..+|+.+...
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 334456777889999999999999998877666555 6888999999999999998888876 88888999988877
Q ss_pred ccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccc
Q psy11593 229 SSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGF 308 (400)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~ 308 (400)
.+..++ +.+...+.--|+...+++.+.+.++.+..+- .+-.+.+.. -.| ..|.+++.........+ .+
T Consensus 123 ~~~~~~--~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~-~~~~~~~~~--lPq--aiGm~i~a~i~~~~~~~-----~~ 190 (269)
T PF06800_consen 123 QDKKSD--KSSSKSNMKKGILALLISTIGYWIYSVIPKA-FHVSGWSAF--LPQ--AIGMLIGAFIFNLFSKK-----PF 190 (269)
T ss_pred cccccc--ccccccchhhHHHHHHHHHHHHHHHHHHHHh-cCCChhHhH--HHH--HHHHHHHHHHHhhcccc-----cc
Confidence 665432 1112234556888899999999887776553 332221111 111 12333222211111111 12
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccH----hHHHHHHHHHHHHHH
Q psy11593 309 FYNYTWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITF----QFIVGAFFVMCSVFL 382 (400)
Q Consensus 309 ~~~~~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~----~~liG~~lVi~gv~l 382 (400)
++...+...+.-+.-+++.+.+.......+....-..+.+.++++.+.|.++|+|.=+. ..++|.++|+.|..+
T Consensus 191 ~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 191 FEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred cccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 22222222222233355555555555555555555567788999999999999999775 467888888887643
No 40
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.55 E-value=2.9e-06 Score=80.28 Aligned_cols=133 Identities=10% Similarity=-0.022 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
..+.++.++.++.|+...+..|...++. +.++.+....+.++..++.++.....++ +.. .+++++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~-----------~~~~~~ 191 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKE---GPELLQFTGWVLLLGALLLLPFAWFLGP-NPQ-----------ALSLQW 191 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcC---CchHHHHHHHHHHHHHHHHHHHHHhcCC-CCC-----------cchHHH
Confidence 4577888888999999999988876431 1112222223344444444444433222 111 012333
Q ss_pred hhhHHHHHH-HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhh
Q psy11593 157 LKVGVPALL-YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVA 224 (400)
Q Consensus 157 ~~~~i~a~l-~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVv 224 (400)
......+++ ..+...++++++++.+++..+++..+.|+++++++++++||++++.+|.|..+.+.|++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 192 GALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 333444444 57888999999999999999999999999999999999999999999999999999974
No 41
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.54 E-value=3.7e-06 Score=73.05 Aligned_cols=147 Identities=17% Similarity=0.214 Sum_probs=105.6
Q ss_pred HHHHHHHHHHhhHHHHHHHHcccc--CCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhh-hcccCcccc
Q psy11593 80 TTSLITLTLQNAIVSLSMRYARMK--NKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRA-HTIQNPLDT 156 (400)
Q Consensus 80 ~l~l~ll~~~~~~~~l~~k~s~~~--~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~-~~~~~~~~~ 156 (400)
+++.+...+..+...+..|...++ .+++..++.+..+.......++.++.....++.+.........+ +....++.+
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 344555666667777777765543 12456788888888888888777776554443221111111111 000022334
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
......+++....|...|..++++++.+.+++...|.+.+.++++++++|+++..++.|+++.++|+++-
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 4467778888999999999999999999999999999999999999999999999999999999999764
No 42
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.51 E-value=1.3e-06 Score=72.61 Aligned_cols=125 Identities=15% Similarity=0.170 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHHHHHHHHHHHH
Q psy11593 256 LLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGGLIVAVVVK 335 (400)
Q Consensus 256 ~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al~g~~~~~~~k 335 (400)
++||...++.|+..++.+ +.. ........+.+ .++.....+.++..... ...+-......++..+++..+....++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLS-ITFWRFLIAGI-LLILLLILGRKPFKNLS-PRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHH-HHHHHHHHHHH-HHHHHHhhccccccCCC-hhhhhhhhHhhccceehHHHHHHHHHH
Confidence 357788889999888743 222 33333333433 22222222211100000 000111122222234556666778889
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 336 YADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 336 ~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
+.++...+...+++|+++.++++++++|+++..+++|.++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987643
No 43
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.45 E-value=2.1e-06 Score=71.57 Aligned_cols=127 Identities=15% Similarity=0.225 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchH--HHHHHHHHHhHHHHHHHHHHhh-cCchhhhccccccchHHHHHHHHHH-
Q psy11593 248 FAATILACLLSGLAGVYFEMILKGSDVSI--WMRNVQLSLLSLPCAACTCFIS-DWDKIFQHGFFYNYTWFIVFLVLLN- 323 (400)
Q Consensus 248 ~l~~l~aa~~~al~~V~~ekllk~~~~~~--~~~~~~l~~~g~~~~l~~~~~~-~~~~i~~~~~~~~~~~~~~l~i~~~- 323 (400)
..+++++|+++++..++.|--+++.|... .++++. ...+.....+.. .++... ..+...|+.+..+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiV----i~~~l~~v~~~~g~~~~~~------~~~~k~~lflilSG 74 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIV----ILIFLLIVLLVTGNWQAGG------EIGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHH----HHHHHHHHHHhcCceeccc------ccCcceehhhhHHH
Confidence 45679999999999998776666554322 233322 222222222221 111110 1233344443333
Q ss_pred ---HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 324 ---ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 324 ---al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
+++.+++.+.+|.-++....+.+..++++++++|++++||++|..+++|+.+|++|+.+..
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 2333455556677777777888999999999999999999999999999999999986644
No 44
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.37 E-value=1.8e-06 Score=71.67 Aligned_cols=68 Identities=13% Similarity=0.271 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593 160 GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQ 227 (400)
Q Consensus 160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~ 227 (400)
+..-++|.+...++..+++.+|.+.+..+.++.++++++++++++|||++++||+|+.+.++|++++.
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 33336688999999999999999999999999999999999999999999999999999999998774
No 45
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.34 E-value=0.00054 Score=67.69 Aligned_cols=176 Identities=11% Similarity=0.032 Sum_probs=113.3
Q ss_pred hhhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCc
Q psy11593 74 RAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNP 153 (400)
Q Consensus 74 ~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~ 153 (400)
++...+++..++..+.|++..+-.|..++. +-|.|+. ...++.++++....-...-+.+....++ .++
T Consensus 3 ~~~~~G~~~~~i~~~~~GS~~~p~K~~k~w-~wE~~W~-----v~gi~~wl~~~~~~g~~~~~~f~~~~~~------~~~ 70 (345)
T PRK13499 3 NAIILGIIWHLIGGASSGSFYAPFKKVKKW-SWETMWS-----VGGIFSWLILPWLIAALLLPDFWAYYSS------FSG 70 (345)
T ss_pred chhHHHHHHHHHHHHHhhcccccccccCCC-chhHHHH-----HHHHHHHHHHHHHHHHHHhhhHHHHHHh------cCH
Confidence 346788999999999999999999987653 2334432 1222333333321111110122221111 123
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCc-------cHHHHHHHHHHHHhhhe
Q psy11593 154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKI-------SKIQWISLVILVVGVAL 225 (400)
Q Consensus 154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erl-------s~~qwlal~l~~~GVvi 225 (400)
+.+..-.+.+++..+.+..++.+++++..+...-+. .++.+..+++..++++|=- ...-.+|+++.++|+++
T Consensus 71 ~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l 150 (345)
T PRK13499 71 STLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAI 150 (345)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHH
Confidence 344445667888999999999999999988776555 5888999999999987532 34456788888899988
Q ss_pred eec----ccccccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy11593 226 VQL----SSVVEKARPADFVENRMLGFAATILACLLSGLAG 262 (400)
Q Consensus 226 v~~----~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~ 262 (400)
... .+.+.+++ +..+.+.--|++.++++.+.+++.+
T Consensus 151 ~s~Ag~~k~~~~~~~-~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 151 VGRAGQLKERKMGIK-KAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred HHHhhhhcccccccc-cccccchHhHHHHHHHHHHHHHHHH
Confidence 877 33221100 0123456789999999999999877
No 46
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.30 E-value=9.7e-06 Score=78.95 Aligned_cols=66 Identities=18% Similarity=0.313 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 164 LLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 164 ~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
+++.++..+.+.|+.+.|++..+=+.....++.++++.+++|||+++++|.|.++.++|.+++..-
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 457788899999999999999999999999999999999999999999999999999999877543
No 47
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.22 E-value=5e-05 Score=75.69 Aligned_cols=151 Identities=15% Similarity=0.206 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCC--CCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhccc-Cc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNK--DELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQ-NP 153 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~--~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~-~~ 153 (400)
..+.++.++..+.|+...+..|...++.+ ++++++...-...-.+..++++++....+................. ..
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 45788888888999999888887654321 2245555454444455555555554422211111100000000000 00
Q ss_pred cc-chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593 154 LD-TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQ 227 (400)
Q Consensus 154 ~~-~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~ 227 (400)
.. .......++.|.+.|.+.|++++++++.++++....+|+++.++++++++|+++..|++|.++.+.|+.+.+
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 00 112344567788999999999999999999999999999999999999999999999999999999997653
No 48
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.21 E-value=1.9e-05 Score=76.83 Aligned_cols=148 Identities=14% Similarity=0.074 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhc-ccCccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHT-IQNPLD 155 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~-~~~~~~ 155 (400)
..+.+..++..+.|+...+..|...++ +++++.+..+.......+..+++....+...... ....... ...+..
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 218 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTI---KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLP--HGFMQAISGVNVTK 218 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc---CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHH--HHHHHhhcccCchH
Confidence 457777778888898888888765431 2456666666666555555555544332211110 0000000 001111
Q ss_pred chh-hHHHHH-HHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 156 TLK-VGVPAL-LYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 156 ~~~-~~i~a~-l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
.+. ....+. ++...|.+.|.++++++++++++....+|+++++++++++||+++..|++|.++.++|+.+.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 219 IYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV 294 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 111 223333 45666678889999999999999999999999999999999999999999999999999887654
No 49
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.17 E-value=5.2e-05 Score=73.57 Aligned_cols=135 Identities=16% Similarity=0.101 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
..+.++.++.++.|+...+..|...++ +++... ....++..++..+....... ... .++..+
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-----~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~~-----------~~~~~~ 208 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-----HGPATV-AIGSLIAALIFVPIGALQAG-EAL-----------WHWSIL 208 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCchHH-HHHHHHHHHHHHHHHHHccC-ccc-----------CCHHHH
Confidence 357778888889999999888876543 122222 22223322232332222211 000 011111
Q ss_pred hhhHHHHHH-HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 157 LKVGVPALL-YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 157 ~~~~i~a~l-~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
......+++ -.++..++++++++.+++.++++..+.|++.++++++++||++++.||+|.++.++|++.....
T Consensus 209 ~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 209 PLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 112233433 4677889999999999999999999999999999999999999999999999999999887544
No 50
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.17 E-value=4.5e-05 Score=74.07 Aligned_cols=134 Identities=13% Similarity=-0.001 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
..+.++.++.++.|+...+..|...++. ++.+..+.. ... +..+....... .... .++..+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~~-----~~~~~~~~~--~~~-~l~~~~~~~~~-~~~~----------~~~~~~ 215 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARGK-----NGITLFFIL--TAL-ALWIKYFLSPQ-PAMV----------FSLPAI 215 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCC-----CchhHHHHH--HHH-HHHHHHHHhcC-cccc----------CCHHHH
Confidence 4577888888999999999888875431 222222211 111 11111111211 1100 112223
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
......++...+...+++++++++|++..+++..+.|++.++++++++||+++..||+|.++.+.|+++....
T Consensus 216 ~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 216 IKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 3334444556678899999999999999999999999999999999999999999999999999999877543
No 51
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.13 E-value=7.5e-05 Score=71.92 Aligned_cols=130 Identities=8% Similarity=-0.042 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhc-CchhhhccccccchHHHHHH--HHHHH
Q psy11593 248 FAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISD-WDKIFQHGFFYNYTWFIVFL--VLLNA 324 (400)
Q Consensus 248 ~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~-~~~i~~~~~~~~~~~~~~l~--i~~~a 324 (400)
+++.+++++++|...+..|+..++++. . + ......+.+..++...... +..... ....++.+.. ....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~--~-~-~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 74 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPD--F-L-WWALLAHSVLLTPYGLWYLAQVGWSR----LPATFWLLLAISAVANM 74 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhH--H-H-HHHHHHHHHHHHHHHHHhcccCCCCC----cchhhHHHHHHHHHHHH
Confidence 467789999999999999977665422 1 1 2222223333333222210 111000 0111221221 12233
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593 325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR 385 (400)
Q Consensus 325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~ 385 (400)
.+..+....+++.+........+..|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 75 VYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4445556677888888888889999999999999999999999999999999999876543
No 52
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.10 E-value=8.1e-05 Score=74.35 Aligned_cols=65 Identities=12% Similarity=0.112 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 166 YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 166 ~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
-.+...++++++++++++..++...+.|+++++++++++||++++.+++|.++.++|+.++..+.
T Consensus 266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 34567789999999999999999999999999999999999999999999999999999987543
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.09 E-value=0.00024 Score=60.48 Aligned_cols=121 Identities=15% Similarity=0.078 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHH
Q psy11593 246 LGFAATILACLLSGLAGVYFEMILKGSDV-SIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNA 324 (400)
Q Consensus 246 ~G~l~~l~aa~~~al~~V~~ekllk~~~~-~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~a 324 (400)
.|.++++.+.++.+.+-+..|+-.++.+. +... .. . ..... .. . ...+.++.++..+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~-------~~-~-~~~~~-~~-----------~-p~~~i~lgl~~~~ 59 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW-------DF-I-AALLA-FG-----------L-ALRAVLLGLAGYA 59 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh-------HH-H-HHHHH-Hh-----------c-cHHHHHHHHHHHH
Confidence 36788889999999888888877665431 1100 00 0 00000 00 0 0124556666666
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH--HhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVY--LFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~l--lfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
++..+..++++..|........+...++..+.++. +|||++|+.+++|.++|++|+++.++.++
T Consensus 60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 66677788889988877777766666677777775 89999999999999999999999876544
No 54
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.08 E-value=8.3e-05 Score=72.07 Aligned_cols=136 Identities=15% Similarity=0.132 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
..+.+..++..+.|+...+..|..... .+.......-.+...+..++...... .... ..++..+
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~ 212 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPLP------VGMMAGAAEMLAAGVVLLIASLLSGE-RLTA---------LPTLSGF 212 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCC------cchHHHHHHHHHHHHHHHHHHHHcCC-cccc---------cCCHHHH
Confidence 356777777788888888777664421 11112222222222222222222211 1100 0011233
Q ss_pred hhhHHHHHH-HHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593 157 LKVGVPALL-YVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL 228 (400)
Q Consensus 157 ~~~~i~a~l-~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~ 228 (400)
......+++ ..+...++++++++++++..+++..+.|++.++++++++||++++.+|+|.++.+.|+.+...
T Consensus 213 ~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 213 LALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 333444443 457788999999999999999999999999999999999999999999999999999988754
No 55
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.95 E-value=0.00035 Score=67.90 Aligned_cols=147 Identities=10% Similarity=0.046 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccc
Q psy11593 77 MLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 77 ~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
..+.++.++..+.|+...+..|...++. .+.......+....+..+..........+..... . .+.. .++..+
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~--~~~~~~ 214 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHS--TRPAVMSLVVWSALIPIIPFFVASLILDGSATMI--H-SLVT--IDMTTI 214 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc--CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh--h-hhcc--CCHHHH
Confidence 3577788888889999998888754321 1112222222222222221111111112100000 0 0000 122233
Q ss_pred hhhHHHHH-HHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 157 LKVGVPAL-LYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 157 ~~~~i~a~-l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
......++ .-.++..+++.++++++++..+.+..+.|++.++++++++||+++..||+|.++.++|+.+...+.
T Consensus 215 ~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 215 LSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 33333333 345677889999999999999999999999999999999999999999999999999998775543
No 56
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.94 E-value=0.00051 Score=66.73 Aligned_cols=137 Identities=11% Similarity=0.084 Sum_probs=87.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcC-chhhhccccccchHHHH--HH
Q psy11593 243 NRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDW-DKIFQHGFFYNYTWFIV--FL 319 (400)
Q Consensus 243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~-~~i~~~~~~~~~~~~~~--l~ 319 (400)
+...|.+++++++++||...++.|.. .+.+ +....... ..++.++.++....... +.... . +.......+ ..
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R-~~~a~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 79 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHR-VIWSFFFMVVLMSICRQWSYLKT-L-IQTPQKIFMLAVS 79 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHH-HHHHHHHHHHHHHHHccHHHHHH-H-HcCHHHHHHHHHH
Confidence 44579999999999999999999653 3322 22222223 23343333332222211 11000 0 111111112 22
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 320 VLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 320 i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
.+..+....+..+.+++.+....+...++.|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 23334455566677899999999999999999999999999999999999999999999987643
No 57
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.80 E-value=0.00032 Score=58.84 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCC
Q psy11593 322 LNASGGLIVAVVVKYADNILK-GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK 390 (400)
Q Consensus 322 ~~al~g~~~~~~~k~~~ai~~-~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~ 390 (400)
..++.-.+.+.++|+.+-... +..+....+.+.++|+++|+|++|+.+++|.++|+.|+...+...++.
T Consensus 39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 334444556677777663222 233457788999999999999999999999999999998776655433
No 58
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.80 E-value=0.0013 Score=62.35 Aligned_cols=134 Identities=13% Similarity=0.098 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhh-cCchh-hhccccccchHHHHHH--HHH
Q psy11593 247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFIS-DWDKI-FQHGFFYNYTWFIVFL--VLL 322 (400)
Q Consensus 247 G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~-~~~~i-~~~~~~~~~~~~~~l~--i~~ 322 (400)
|..++++++++||...+..|. ..+. +.......=.+++.++.++..... +++.. +.....+......... .+.
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~~~--~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LKPL--PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hccC--CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 788899999999999999886 3332 222222211223333322222111 11110 0000000011111111 112
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593 323 NASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY 383 (400)
Q Consensus 323 ~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly 383 (400)
.+....+..+.+++.+....+...++.|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 3344455666788888888888899999999999999999999999999999999998654
No 59
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.79 E-value=0.00014 Score=61.96 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHH--HhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 160 GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAII--LLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~--~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
...-++|.++..++.++++.+|++.+.-+.+..+..+++.++. ++||++++.||+|+++.++|++++..++
T Consensus 52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 3444678999999999999999999999999888888888885 8999999999999999999999986543
No 60
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.74 E-value=0.0002 Score=60.10 Aligned_cols=72 Identities=15% Similarity=0.333 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
..+..++|.++..+...+++++|.+.+-.+. ....+.+++.+++++||++++.|++++.+.++|++.+...+
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 4556678999999999999999999887775 69999999999999999999999999999999999886544
No 61
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.63 E-value=0.00036 Score=57.68 Aligned_cols=71 Identities=11% Similarity=0.170 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
....-++|.++..+...+++.+|.+.+-.+ .....+.+++.+++++||++++.|++++.+.++|++.+...
T Consensus 33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 345567788999999999999999888777 45899999999999999999999999999999999988543
No 62
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.63 E-value=0.00046 Score=56.55 Aligned_cols=70 Identities=21% Similarity=0.318 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL 228 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~ 228 (400)
..+..++|..+..+...+++.+|.+++-.+- ....+.+++.+++++||++++.|++++.+.++|++.+..
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 4555678899999999999999988766555 499999999999999999999999999999999998743
No 63
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.59 E-value=0.00045 Score=56.29 Aligned_cols=70 Identities=19% Similarity=0.308 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHH-HHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeec
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQ-VTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQL 228 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~-ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~ 228 (400)
...-.++|.++..+.-.|++++|.+++- +-...-.+.+++.+++++||+++..|++++.+.++|++.+..
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 4555677888999999999999987755 455689999999999999999999999999999999987744
No 64
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.58 E-value=0.0007 Score=65.70 Aligned_cols=131 Identities=15% Similarity=0.170 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccch
Q psy11593 78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTL 157 (400)
Q Consensus 78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 157 (400)
.+.+..++..+.++...+..|.... ++.+.++....--++.+..+....++ . ++. .++..+
T Consensus 152 ~Gi~~~l~sg~~y~~~~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~~~-~-~~~----------~~~~~~ 212 (290)
T TIGR00776 152 KGILLLLMSTIGYLVYVVVAKAFGV-------DGLSVLLPQAIGMVIGGIIFNLGHIL-A-KPL----------KKYAIL 212 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCC-------CcceehhHHHHHHHHHHHHHHHHHhc-c-cch----------HHHHHH
Confidence 3777777788889999898887642 22222222222111122222221111 0 110 012223
Q ss_pred hhHHHHHHHHHHHHHHHHHhh-cCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHH----HHHHHHHHhhheee
Q psy11593 158 KVGVPALLYVIQNNLLYISAS-NLDAATSQVTYQLKILTTAIFAIILLKKKISKIQW----ISLVILVVGVALVQ 227 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~-~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qw----lal~l~~~GVviv~ 227 (400)
...+.+++..+++.+++.+.+ +++++++.++.+..|+..++++++++||+.+++|+ +|.++.+.|+.++.
T Consensus 213 ~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 213 LNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 344477778889999999999 99999999999999999999999999999999999 99999999998764
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.55 E-value=0.00087 Score=55.55 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
++...+...+++..+........++.++++.++|+++|||++|..+++|.+++++|+.+..
T Consensus 48 ~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 48 GLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4455556778888887777666778999999999999999999999999999999987643
No 66
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.54 E-value=0.00064 Score=56.06 Aligned_cols=69 Identities=17% Similarity=0.301 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 158 KVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
...+..++|.++..+...+++++|.+++-.+- ....+.+++.+++++||++++.|++++.+.+.|++.+
T Consensus 37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 34555677889999999999999988765554 5889999999999999999999999999999999876
No 67
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.50 E-value=0.0022 Score=62.49 Aligned_cols=142 Identities=16% Similarity=0.219 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHH--hcCCchhhhHHHhhhhcccCcccc
Q psy11593 79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFA--DEGFHVGRFINLVRAHTIQNPLDT 156 (400)
Q Consensus 79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~--~~~~~~~~~~~~l~~~~~~~~~~~ 156 (400)
+++++++..+..+......+...++ ++.++.+.++..+++.+.+.++.... .+ +..+..+.. ...|.-+
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~---~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~--~~~~~~~f~----~~~p~~~ 225 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKK---YGKSPWELMFYTNLFSLPFLLILLFLLPTG--EFRSAIRFI----SAHPSVL 225 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHHHHHHHHHHHHHHHHHHHHHhh--HhhHHHHHH----HHhHHHH
Confidence 7888888888888887777665543 23366888999999988887766655 22 122211111 1233333
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 157 LKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
.....-++..+....+.+.-.+..++.+.+++..++-+++.+++.+++++++++.||.|+++.+.|..+-..+
T Consensus 226 ~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 226 LYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 3345556666666677778889999999999999999999999999999999999999999999999875443
No 68
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.37 E-value=0.0014 Score=63.99 Aligned_cols=117 Identities=13% Similarity=0.127 Sum_probs=84.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHH
Q psy11593 243 NRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLL 322 (400)
Q Consensus 243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~ 322 (400)
+..+|..+++.++++.+.+..++||-.++.+.... .+++. ..+++ -+..+|..++.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~--------------------~~~~~--~~~~l--~~~~W~~G~~~ 59 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSL--------------------RAGSG--GRSYL--RRPLWWIGLLL 59 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------------------cccch--hhHHH--hhHHHHHHHHH
Confidence 56789999999999999999999987665321000 00000 00011 12334444444
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593 323 NASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY 383 (400)
Q Consensus 323 ~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly 383 (400)
.++|...-...+.+++....++...++.+++.+++.++++|+++...++|.++++.|..+.
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 4556555556778899999999999999999999999999999999999999999997543
No 69
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.36 E-value=0.0048 Score=50.99 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593 325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
.+..+..+..++.++ .......+.|+++.++|+++|+|+++...++|.+++++|+.+-..+
T Consensus 47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 445556677888885 5567778899999999999999999999999999999998776544
No 70
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.30 E-value=0.0053 Score=57.40 Aligned_cols=58 Identities=22% Similarity=0.360 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhh
Q psy11593 167 VIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVA 224 (400)
Q Consensus 167 ~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVv 224 (400)
++-..+-.++++.+|..++.++.++.|.+.++..+++|+|++|..||++++....+.+
T Consensus 221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 4556778899999999999999999999999999999999999999999998888775
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.27 E-value=0.004 Score=51.47 Aligned_cols=64 Identities=14% Similarity=0.257 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCC
Q psy11593 324 ASGGLIVAVVVKYADNILK-GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTP 387 (400)
Q Consensus 324 al~g~~~~~~~k~~~ai~~-~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~ 387 (400)
++.-.+.+.++|..+-... +.-+....+.++++|+++|||++|+.+++|.++|++|+...+...
T Consensus 41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3333445566666652221 222446778899999999999999999999999999998876543
No 72
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.27 E-value=0.0098 Score=56.41 Aligned_cols=74 Identities=22% Similarity=0.274 Sum_probs=64.5
Q ss_pred chhhHHHHHHHH-HHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 156 TLKVGVPALLYV-IQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 156 ~~~~~i~a~l~~-~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
+......+++.. +...+++.+++..+++..+.+..+.|++..++++++++|+++.++++|..+.+.|+.+....
T Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 344455555555 58899999999999999999999999999999999999999999999999999999887544
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.24 E-value=0.0046 Score=58.98 Aligned_cols=121 Identities=17% Similarity=0.117 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCccc
Q psy11593 76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLD 155 (400)
Q Consensus 76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 155 (400)
..-.++.+++.++.+...+...|+... ++. .+++-+.+.++++..++....++..+ .+.
T Consensus 136 ~~kgi~~Ll~stigy~~Y~~~~~~~~~-------~~~-~~~lPqaiGm~i~a~i~~~~~~~~~~-------------~k~ 194 (269)
T PF06800_consen 136 MKKGILALLISTIGYWIYSVIPKAFHV-------SGW-SAFLPQAIGMLIGAFIFNLFSKKPFF-------------EKK 194 (269)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCC-------Chh-HhHHHHHHHHHHHHHHHhhccccccc-------------ccc
Confidence 344556677778888888888888543 222 33444555555555444332211111 122
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHH
Q psy11593 156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLV 217 (400)
Q Consensus 156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~ 217 (400)
.++=.+.++++.+.|.+++++.+....++.-.+.|+.++..++.+.++|||+=+++++....
T Consensus 195 ~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~ 256 (269)
T PF06800_consen 195 SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL 256 (269)
T ss_pred hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence 33457889999999999999999999999999999999999999999999999999886443
No 74
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.95 E-value=0.0031 Score=50.50 Aligned_cols=59 Identities=12% Similarity=0.272 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHH
Q psy11593 160 GVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVI 218 (400)
Q Consensus 160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l 218 (400)
.....+|.++..+...+++++|.+++-.+ .....+.+++.+++++||++++.||.++.+
T Consensus 33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 44445789999999999999998887554 569999999999999999999999999876
No 75
>KOG2922|consensus
Probab=96.87 E-value=0.0088 Score=57.79 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 161 VPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 161 i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
..-+.+.++....|.|..+-|++..+-+.++..++.++++..+|+||+++...+|.++.++|-.++....
T Consensus 69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 3345578899999999999999999999999999999999999999999999999999999998876544
No 76
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.82 E-value=0.0035 Score=51.92 Aligned_cols=69 Identities=25% Similarity=0.384 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCChHHHHHH-hhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 158 KVGVPALLYVIQNNLLYISASNLDAATSQVT-YQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll-~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
+|.+|=+++..+...+|+.+...|.+.+.-+ +++.-++|++.++++.+|..+++.|+|+++.++|+.++
T Consensus 43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 4888999999999999999999999988877 58999999999988877888999999999999999765
No 77
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.72 E-value=0.021 Score=46.81 Aligned_cols=61 Identities=10% Similarity=0.036 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 324 ASGGLIVAVVVKYAD-NILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 324 al~g~~~~~~~k~~~-ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
++.-.+.+..+|..+ .+.=+.-+....+.+.+.|+++|+|++|+.+++|.++++.|+..-+
T Consensus 40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 444445566677665 2222344556778999999999999999999999999999987654
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.70 E-value=0.019 Score=46.90 Aligned_cols=62 Identities=15% Similarity=0.186 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhcc
Q psy11593 324 ASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSR 385 (400)
Q Consensus 324 al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~ 385 (400)
.+.-.+.+..+|..+- +.=+.-+-...+.+.+.|+++|+|+++...++|.+++++|+..-+.
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 3444556677787662 2223445567889999999999999999999999999999876554
No 79
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.65 E-value=0.024 Score=46.80 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 324 ASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 324 al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
++...+.+..+|..+- +.=+.-+....+.+.+.|+++|+|++|+.+++|.++|+.|+..-+
T Consensus 46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4444555667777652 222333456778899999999999999999999999999987643
No 80
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.63 E-value=0.00025 Score=65.81 Aligned_cols=270 Identities=13% Similarity=0.173 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchh
Q psy11593 79 KTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLK 158 (400)
Q Consensus 79 ~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 158 (400)
.++..++-++.|++.++...-- ++.++.+.--.-+. .+++++.+++.... ... ++.+..
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~G---ALifaiiv~~~~~p-~~T-------------~~~~iv 61 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTLG---ALIFAIIVFLFVSP-ELT-------------LTIFIV 61 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccHH---HHHHHHHHheeecC-ccc-------------hhhHHH
Confidence 3455566788899998654221 23344443333232 22334433332211 111 122222
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhcCCccHHHH----HHHHHHHHhhheeecccccc
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLKKKISKIQW----ISLVILVVGVALVQLSSVVE 233 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~erls~~qw----lal~l~~~GVviv~~~~~~~ 233 (400)
-.+.+++.......+|-|++++..+.+.=+. .++.+-+.+++++.++|--+..|. .|+++.++|+.+-...+..+
T Consensus 62 ~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n 141 (288)
T COG4975 62 GFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN 141 (288)
T ss_pred HHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence 3566777888888999999998887776554 478889999999999998887775 57888888988877665432
Q ss_pred cCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCch-HHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccc
Q psy11593 234 KARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDVS-IWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNY 312 (400)
Q Consensus 234 ~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~-~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~ 312 (400)
+.++...+.-.|+...+.+.+.+-.+.|..+.. +-++-+ ..-| ..|.+.+.+.+-....+. .++.+
T Consensus 142 --k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f-~v~g~saiLPq-----AiGMv~~ali~~~~~~~~-----~~~K~ 208 (288)
T COG4975 142 --KEEENPSNLKKGIVILLISTLGYVGYVVLFQLF-DVDGLSAILPQ-----AIGMVIGALILGFFKMEK-----RFNKY 208 (288)
T ss_pred --ccccChHhhhhheeeeeeeccceeeeEeeeccc-cccchhhhhHH-----HHHHHHHHHHHhhccccc-----chHHH
Confidence 122223345567777777777776655555432 211111 1111 123333322221111111 11112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHh----HHHHHHHHHHHHHH
Q psy11593 313 TWFIVFLVLLNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQ----FIVGAFFVMCSVFL 382 (400)
Q Consensus 313 ~~~~~l~i~~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~----~liG~~lVi~gv~l 382 (400)
.+.-.+.-+.-++|.+.+.+.-...+..+.-..+.+..+++++-+.++++|+=|.. .++|.++++.|..+
T Consensus 209 t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 209 TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 22222222233555554433333222211112244566899999999999998875 56788888877544
No 81
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.51 E-value=0.11 Score=51.41 Aligned_cols=63 Identities=11% Similarity=0.233 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccC
Q psy11593 324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
..+..++...++|.+-......+..+++++.++|+++++++.++.+++|++++++|+.+....
T Consensus 90 v~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 90 VEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred HHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence 346666667788888888888899999999999999999999999999999999998765443
No 82
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.05 E-value=0.15 Score=50.56 Aligned_cols=141 Identities=15% Similarity=0.206 Sum_probs=82.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHhHHHHHH-HHHHhhcCchhhhccccccchHHHHHHH
Q psy11593 243 NRMLGFAATILACLLSGLAGVYFEMILKGSD-VSIWMRNVQLSLLSLPCAA-CTCFISDWDKIFQHGFFYNYTWFIVFLV 320 (400)
Q Consensus 243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~-~~~~~~~~~l~~~g~~~~l-~~~~~~~~~~i~~~~~~~~~~~~~~l~i 320 (400)
+...|+++++++++|+|.-.+-+|| .|+-+ ...|. .. .+++.++.. ....+..+.-. ...+..+...+...
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~--v~-gi~~wl~~~~~~g~~~~~~f~---~~~~~~~~~~~~~~ 76 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWS--VG-GIFSWLILPWLIAALLLPDFW---AYYSSFSGSTLLPV 76 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCchhHHHH--HH-HHHHHHHHHHHHHHHHhhhHH---HHHHhcCHHHHHHH
Confidence 4678999999999999998887776 56543 22222 11 112222111 10111111100 11111222222221
Q ss_pred ----HHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccc---c----HhHHHHHHHHHHHHHHhccCCC
Q psy11593 321 ----LLNASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVI---T----FQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 321 ----~~~al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~---t----~~~liG~~lVi~gv~ly~~~~~ 388 (400)
..-++|++.....+|+.+- ..-.+..-+..++.++++.+++||-. + ...++|.+++++|+.+..+...
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2335677777888899873 34445566788999999999998654 2 3478899999999988877443
Q ss_pred CC
Q psy11593 389 SK 390 (400)
Q Consensus 389 ~~ 390 (400)
++
T Consensus 157 ~k 158 (345)
T PRK13499 157 LK 158 (345)
T ss_pred hc
Confidence 33
No 83
>KOG1441|consensus
Probab=96.04 E-value=0.014 Score=57.01 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHH-HHHHHhcCCchhhhHHHhhhhcccCcc
Q psy11593 76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCL-GLVFADEGFHVGRFINLVRAHTIQNPL 154 (400)
Q Consensus 76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l-~~l~~~~~~~~~~~~~~l~~~~~~~~~ 154 (400)
...+++......+..+..-++.|...++. ++++++.+..--..-+.+.+.+ |+.....+... .. ...-..+ .
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~-~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~----~~~~~~~-~ 233 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSK-GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VG----FLTAPWF-V 233 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccccCchHHHHHhhhHHHHHHhcchHhhhcccce-ee----eeccccc-h
Confidence 45667777777788888888887766421 3455555554443333333333 54444333111 00 0000001 1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593 155 DTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQ 227 (400)
Q Consensus 155 ~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~ 227 (400)
+...+..-++++...|...|..+.+++|-++++....|=..+.+.+++++++++++.+.+|.++.++|+.+-.
T Consensus 234 ~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 234 TFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 1333455568899999999999999999999999999999999999999999999999999999999998753
No 84
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.94 E-value=0.53 Score=40.49 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHHHH
Q psy11593 248 FAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASGG 327 (400)
Q Consensus 248 ~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al~g 327 (400)
.++.+.+..+.+++...+-++.+..+ +++...+.....|.+...+.....+.... ......++|.|+.-+..++.-
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~---~~~~~~p~w~~lGG~lG~~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSL---ASLSSVPWWAYLGGLLGVFFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccccc---chhccCChHHhccHHHHHHHH
Confidence 45567777777888888887766544 23434444444555555554444333221 112234555555433333333
Q ss_pred HHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHH-Hh---cccccHhHHHHHHHHHHHHHH
Q psy11593 328 LIVAVVVKYADNILKGFA-TSLAIVLACVFQVY-LF---AFVITFQFIVGAFFVMCSVFL 382 (400)
Q Consensus 328 ~~~~~~~k~~~ai~~~~~-~~~~~v~a~lls~l-lf---ge~~t~~~liG~~lVi~gv~l 382 (400)
....+.+...++...... ..-+.+.+.+++.+ +| .++++...++|.++++.|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 334455555554333322 23345566677765 33 578999999999999999864
No 85
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=95.80 E-value=0.3 Score=46.85 Aligned_cols=79 Identities=13% Similarity=0.143 Sum_probs=70.2
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 152 NPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 152 ~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
+++.+..+...|..-++--.++-.|.+++|.++.-++.+..|...-+++++++||.++.-|+.+-++.-+|+++...++
T Consensus 207 ~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 207 ANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred CchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777788888999999999999999999999999999999999999999999999999999999998876543
No 86
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.75 E-value=0.15 Score=50.11 Aligned_cols=143 Identities=18% Similarity=0.254 Sum_probs=79.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhCCC-chHHHHHHHHHHhHHHHHHH--HH-HhhcCchhhhccccccch--HHH
Q psy11593 243 NRMLGFAATILACLLSGLAGVYFEMILKGSD-VSIWMRNVQLSLLSLPCAAC--TC-FISDWDKIFQHGFFYNYT--WFI 316 (400)
Q Consensus 243 ~~~~G~l~~l~aa~~~al~~V~~ekllk~~~-~~~~~~~~~l~~~g~~~~l~--~~-~~~~~~~i~~~~~~~~~~--~~~ 316 (400)
+...|+++..++++++|...+=.||. |+-+ .+.|... .+++.++... .. .+++..++ ....+ .+.
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~---gi~swli~P~~~a~l~ip~~~~i-----~~~~~~~~l~ 74 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQ---GIFSWLIVPWLWALLAIPDFFSI-----YSATPASTLF 74 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHH---HHHHHHHHHHHHHHHhCCcHHHH-----HHhCChhHHH
Confidence 56789999999999999887766654 4322 2223221 2233222211 11 12222221 11111 121
Q ss_pred --HHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHhc-------ccccHhHHHHHHHHHHHHHHhccC
Q psy11593 317 --VFLVLLNASGGLIVAVVVKYAD-NILKGFATSLAIVLACVFQVYLFA-------FVITFQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 317 --~l~i~~~al~g~~~~~~~k~~~-ai~~~~~~~~~~v~a~lls~llfg-------e~~t~~~liG~~lVi~gv~ly~~~ 386 (400)
++.-+.-++|++.....+||++ +...+++.-+..++.+++--++.| ++-....++|.+++++|+.+..+.
T Consensus 75 ~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 75 WTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 2222234678888899999987 344444444455566666444433 233457899999999999887776
Q ss_pred CCCCCCCC
Q psy11593 387 PSSKPKPP 394 (400)
Q Consensus 387 ~~~~~~~~ 394 (400)
...|+++.
T Consensus 155 G~~Ke~~~ 162 (344)
T PF06379_consen 155 GSMKEKEL 162 (344)
T ss_pred HHhhhhhh
Confidence 55554443
No 87
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.47 E-value=1.1 Score=38.41 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhh-hHHHHHHHHHH----HhcCCccHHHHHHHHHHHHhhhe
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQL-KILTTAIFAII----LLKKKISKIQWISLVILVVGVAL 225 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~-~pl~tal~s~~----~L~erls~~qwlal~l~~~GVvi 225 (400)
+...+++....-.+..+....+.++...++.-+ +.+...++-.+ .-++++++.|.+|+++..+|+.+
T Consensus 67 ~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 67 AYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 444788888888888899999998888877664 44444455554 35799999999999999999864
No 88
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.33 E-value=0.092 Score=41.92 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHH
Q psy11593 324 ASGGLIVAVVVKYADNILK-GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFV 376 (400)
Q Consensus 324 al~g~~~~~~~k~~~ai~~-~~~~~~~~v~a~lls~llfge~~t~~~liG~~lV 376 (400)
++.-.+.+..+|+.+-... ...+....+.+.+.|+++|+|++|..+++|..+|
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3344455667777664333 3335577889999999999999999999999876
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=95.08 E-value=0.19 Score=47.51 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCCCC
Q psy11593 324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPSSK 390 (400)
Q Consensus 324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~~~ 390 (400)
++.+.+....+++.|+..-.......+++++++++++++.+++..+|++..+..+|+.+....+...
T Consensus 28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 4556666778899999998899999999999999999999999999999999999998877665443
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.06 E-value=0.068 Score=44.31 Aligned_cols=63 Identities=30% Similarity=0.328 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593 320 VLLNASGGLIVAVVVKYADNILKG-FATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL 382 (400)
Q Consensus 320 i~~~al~g~~~~~~~k~~~ai~~~-~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l 382 (400)
.+....|.+.+.+.+...|-.... .+++++-+++.+.++++.+|..+...++|+++|+.|+.+
T Consensus 48 f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 48 FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 344455666666777777744444 446889999999999999999999999999999999864
No 91
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.64 E-value=0.041 Score=50.97 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhe
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVAL 225 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVvi 225 (400)
.....++.+++..+..+.+++.++.+..+...+.++++++++.++++++++..+|+|..+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3444566777888899999999999999999999999999999999999999999999999988753
No 92
>KOG1581|consensus
Probab=94.28 E-value=0.4 Score=46.23 Aligned_cols=138 Identities=9% Similarity=0.145 Sum_probs=94.0
Q ss_pred hhHHHHHHHHHHHHHh----hHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcc
Q psy11593 75 AFMLKTTSLITLTLQN----AIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTI 150 (400)
Q Consensus 75 ~~~~~~l~l~ll~~~~----~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~ 150 (400)
+.+.++++++...+.- +.+.-+-| ++...+...++-.++...+.+...+..++. .........
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~-------~~k~s~~~mM~~vNLf~~i~~~~~li~qg~--~~~av~F~~---- 235 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFK-------KYKVSSLHMMFGVNLFSAILNGTYLILQGH--LLPAVSFIK---- 235 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhc-------cCCccHhHHHHHHHHHHHHHHHHhhhcCCC--CchHHHHHH----
Confidence 4566666666554432 22222222 223466677888888877777765444332 221111111
Q ss_pred cCcccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhe
Q psy11593 151 QNPLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVAL 225 (400)
Q Consensus 151 ~~~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVvi 225 (400)
++|.-++-+.+.+.+.+++..+.|+-++.-.+-+...+.-++=++..+++.+..+.++++.||+++.+.|.|+..
T Consensus 236 ~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 236 EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 123333346777888888888999999999999999999999999999999999999999999998888877643
No 93
>KOG1580|consensus
Probab=94.24 E-value=0.064 Score=49.78 Aligned_cols=74 Identities=12% Similarity=0.290 Sum_probs=63.8
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 153 PLDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 153 ~~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
|.-++-....|+..+++..+.|.-..+..|-+-+++..+.-+||.+.++++++..++.+||+|..+.|.|...=
T Consensus 238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 43344466677888888888899999999999999999999999999999999999999999999999987543
No 94
>KOG2922|consensus
Probab=92.70 E-value=0.072 Score=51.64 Aligned_cols=125 Identities=11% Similarity=0.181 Sum_probs=89.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHH
Q psy11593 242 ENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVL 321 (400)
Q Consensus 242 ~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~ 321 (400)
.+...|.++.+.++++-+.+.+..+|-+++... .. ...++. ..+++ ..+++|..++
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~--~ra~~g--g~~yl--~~~~Ww~G~l 72 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SG--LRAGEG--GYGYL--KEPLWWAGML 72 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hc--ccccCC--Ccchh--hhHHHHHHHH
Confidence 455678888888888877777777766654311 00 011111 01222 2466777777
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHH-HhccCCCCC
Q psy11593 322 LNASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVF-LYSRTPSSK 390 (400)
Q Consensus 322 ~~al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~-ly~~~~~~~ 390 (400)
..++|-..-...+-+++++..++..+++.+.+++++..++.|.+++.-.+|+++.++|.. +....|+..
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 778888777778888999999999999999999999999999999999999999998854 444444443
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.54 E-value=6.7 Score=34.21 Aligned_cols=136 Identities=12% Similarity=0.106 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHH
Q psy11593 246 LGFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNAS 325 (400)
Q Consensus 246 ~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al 325 (400)
+..+..+.+..+..+++...-++.+..+.+.. -...-...|+...++..+..++.. ....-...++|.|..- .+
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~-As~isf~vGt~~L~~l~l~~~~~~--~~a~~~~~pwW~~~GG---~l 78 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLL-ASLISFLVGTVLLLILLLIKQGHP--GLAAVASAPWWAWIGG---LL 78 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHhcCCC--chhhccCCchHHHHcc---ch
Confidence 45566777888888888888887665543322 222222334443333322222221 1111123345555432 22
Q ss_pred HHHHHHH---HHHhhh-hHHHHHHHHHHHHHHHHHHHHHh-c---ccccHhHHHHHHHHHHHHHHhccCC
Q psy11593 326 GGLIVAV---VVKYAD-NILKGFATSLAIVLACVFQVYLF-A---FVITFQFIVGAFFVMCSVFLYSRTP 387 (400)
Q Consensus 326 ~g~~~~~---~~k~~~-ai~~~~~~~~~~v~a~lls~llf-g---e~~t~~~liG~~lVi~gv~ly~~~~ 387 (400)
|...+.. .....+ +........-+++.+.+++-+=+ | .+++..-++|++++++|+++..+..
T Consensus 79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 3222222 222222 22233333445566666665433 2 6799999999999999977765543
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=92.06 E-value=0.68 Score=43.99 Aligned_cols=128 Identities=16% Similarity=0.153 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHHHHH
Q psy11593 247 GFAATILACLLSGLAGVYFEMILKGSDVSIWMRNVQLSLLSLPCAACTCFISDWDKIFQHGFFYNYTWFIVFLVLLNASG 326 (400)
Q Consensus 247 G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~~~~l~~~g~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~l~i~~~al~ 326 (400)
|.+++++|+++.|-..|=.||.- .. +....|- .+.....+.+.+..++.+.. .+.++..+.-..-+.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~g-Dg~~fQw-~~~~~i~~~g~~v~~~~~~p---------~f~p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TG-DGFFFQW-VMCSGIFLVGLVVNLILGFP---------PFYPWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CC-CcHHHHH-HHHHHHHHHHHHHHHhcCCC---------cceeHHHhhhhhhhcC
Confidence 45666777777776655555432 22 2333332 22222222333332222111 1122222222223445
Q ss_pred HHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHH-Hhccccc-----HhHHHHHHHHHHHHHHhccC
Q psy11593 327 GLIVAVVVKYAD-NILKGFATSLAIVLACVFQVY-LFAFVIT-----FQFIVGAFFVMCSVFLYSRT 386 (400)
Q Consensus 327 g~~~~~~~k~~~-ai~~~~~~~~~~v~a~lls~l-lfge~~t-----~~~liG~~lVi~gv~ly~~~ 386 (400)
+++...++|.++ ++-..+-.+...+..+..|-+ +||++++ +.-.+|++++++|..+|...
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence 555555666655 333334455566666666643 6665443 34789999999998877653
No 97
>KOG1444|consensus
Probab=91.99 E-value=1 Score=43.79 Aligned_cols=145 Identities=11% Similarity=0.027 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccch
Q psy11593 78 LKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTL 157 (400)
Q Consensus 78 ~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 157 (400)
.+|..+..-.+..++..+.+|..-.. ........++-..++.+.+.....+..+. ......+. .-...+.-+.
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~---~~l~~~~lv~yNnl~~L~~l~~~~~~~ge--~~~l~~~~--~~~~~~~~~~ 229 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDS---ANLNKFGLVFYNNLLSLPPLLILSFITGE--LDALSLNF--DNWSDSSVLV 229 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcc---ccccceeEEeehhHHHHHHHHHHHHHhcc--hHHHHhhc--ccccchhHHH
Confidence 35666666666667777777776532 22344557777777777766666555442 22111110 0001112233
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
.+.+.+++..+-+++.++..+..++.+.+++.....+.+.+...++.+++.++....|+.++++|-++-+..
T Consensus 230 ~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~ 301 (314)
T KOG1444|consen 230 VMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA 301 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence 467777888899999999999999999999998888888888888888999999999999999998876544
No 98
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.55 E-value=0.62 Score=43.11 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=61.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 158 KVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 158 ~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
.+++.|++-++-.++.-|-++-++.++++++.++.-+..++-+.+++++..+.....+++++++..++-
T Consensus 226 am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 226 AMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred HHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 467888888888888888999999999999999999999999999999999999999999888776554
No 99
>KOG4510|consensus
Probab=91.49 E-value=0.11 Score=49.09 Aligned_cols=59 Identities=17% Similarity=0.119 Sum_probs=45.7
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 330 VAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 330 ~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
+.|.+.|.+-.-....+..+|+++++++|.+++|+.|.+-.+|..+.+.|+.+..|++-
T Consensus 114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 34455554322223355679999999999999999999999999999999988887753
No 100
>KOG2765|consensus
Probab=91.01 E-value=4.6 Score=40.30 Aligned_cols=148 Identities=14% Similarity=0.057 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCc-
Q psy11593 75 AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNP- 153 (400)
Q Consensus 75 ~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~- 153 (400)
+..++-++..+.++.|+....+.|.=..++ |.+.+....--+..++-+++-.+.++.-.....++ +.-|
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~e-g~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~---------F~lP~ 313 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDE-GERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER---------FELPS 313 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccc-cccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc---------ccCCC
Confidence 367888888888999999988877744332 34555433332333334433332222111000010 0111
Q ss_pred -ccchhh-HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccc
Q psy11593 154 -LDTLKV-GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSV 231 (400)
Q Consensus 154 -~~~~~~-~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~ 231 (400)
.+.... ....+.-++..+++-.|.-..++-+.++-...++...++.-.++-++++|+.+++|-...++|-+++..++.
T Consensus 314 ~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 314 STQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred CceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 111122 333344678999999999999999999999988888888888888999999999999999999999987654
Q ss_pred c
Q psy11593 232 V 232 (400)
Q Consensus 232 ~ 232 (400)
.
T Consensus 394 ~ 394 (416)
T KOG2765|consen 394 N 394 (416)
T ss_pred c
Confidence 3
No 101
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.33 E-value=20 Score=35.48 Aligned_cols=179 Identities=10% Similarity=0.027 Sum_probs=102.5
Q ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcc
Q psy11593 75 AFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPL 154 (400)
Q Consensus 75 ~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~ 154 (400)
+..++.+.-.+-.+..++-.+-.|..+.. +-.+.=++..++.+++.-.+.....-.+..+. +...|.
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W------sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i-------~~~~~~ 70 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGW------SWESYWLVQGIFSWLIVPWLWALLAIPDFFSI-------YSATPA 70 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCc------cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH-------HHhCCh
Confidence 45566666666666666666666666642 21222244556666554443322221122221 112232
Q ss_pred c-chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHhc-------CCccHHHHHHHHHHHHhhhe
Q psy11593 155 D-TLKVGVPALLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILLK-------KKISKIQWISLVILVVGVAL 225 (400)
Q Consensus 155 ~-~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L~-------erls~~qwlal~l~~~GVvi 225 (400)
+ .+....-+++.-+....+=.+++|+..+.-+-+. .+...+-+++-.++.+ ++-...-++++++.++|+.+
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 3 3334556777888888888899998766544333 3444444444444433 34456788999999999999
Q ss_pred eeccccccc-C-CCCcccccchhHHHHHHHHHHHHHHHHHHHH
Q psy11593 226 VQLSSVVEK-A-RPADFVENRMLGFAATILACLLSGLAGVYFE 266 (400)
Q Consensus 226 v~~~~~~~~-~-~~~~~~~~~~~G~l~~l~aa~~~al~~V~~e 266 (400)
+...+...+ + +.+..+.+.-.|++.++++.++||+-+.-.+
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 976553211 0 0111233556899999999999988766443
No 102
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=88.50 E-value=0.21 Score=46.79 Aligned_cols=63 Identities=27% Similarity=0.388 Sum_probs=56.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHH
Q psy11593 156 TLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVI 218 (400)
Q Consensus 156 ~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l 218 (400)
.++-.+|++.....|...++|.+....++.--+.|+..+...+-..++||||=++++|..+..
T Consensus 209 t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~i 271 (288)
T COG4975 209 TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVII 271 (288)
T ss_pred HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhh
Confidence 344588999999999999999999999999999999999999999999999999999875543
No 103
>KOG1583|consensus
Probab=87.19 E-value=2.7 Score=40.22 Aligned_cols=163 Identities=15% Similarity=0.243 Sum_probs=88.6
Q ss_pred ccccccCCCcccccCchhh------HhhhhHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHH
Q psy11593 53 YNCKLATNGEVREVGPEMA------QSRAFMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVC 126 (400)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~ 126 (400)
.=|-|.+.+|.+..+...+ .-.....++..+++..+..+-+++.-....++- |+ .+.+.+|..-++.+
T Consensus 133 iIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ky-GK--h~~EalFytH~LsL--- 206 (330)
T KOG1583|consen 133 IICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKY-GK--HWKEALFYTHFLSL--- 206 (330)
T ss_pred eeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC--ChHHHHHHHHHhcc---
Confidence 4466777776665222222 112345555555555555555555443332221 22 56678888877754
Q ss_pred HHHHHHhcCCchhhhHHHhhhhcccCcc---cchhhHHHH-HHHHHHHHHH-HHHhhc-------CChHHHHHHhhhhHH
Q psy11593 127 LGLVFADEGFHVGRFINLVRAHTIQNPL---DTLKVGVPA-LLYVIQNNLL-YISASN-------LDAATSQVTYQLKIL 194 (400)
Q Consensus 127 l~~l~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~i~a-~l~~~~~~l~-~~al~~-------l~~s~~~ll~~~~pl 194 (400)
+....-++ +.... ++..+.+++ ...-..+|. ..|.+.|.+. |.-.+. .++-+.++...++=+
T Consensus 207 -P~Flf~~~-div~~----~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKF 280 (330)
T KOG1583|consen 207 -PLFLFMGD-DIVSH----WRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKF 280 (330)
T ss_pred -chHHHhcc-hHHHH----HHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHH
Confidence 33322222 22221 111111110 001122343 3465555443 333332 334455566677788
Q ss_pred HHHHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593 195 TTAIFAIILLKKKISKIQWISLVILVVGVALVQ 227 (400)
Q Consensus 195 ~tal~s~~~L~erls~~qwlal~l~~~GVviv~ 227 (400)
+..+++.+.++..+++++|+|..+.|.|.++..
T Consensus 281 vSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 281 VSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999998764
No 104
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=87.07 E-value=13 Score=35.43 Aligned_cols=168 Identities=13% Similarity=0.012 Sum_probs=100.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhh
Q psy11593 80 TTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKV 159 (400)
Q Consensus 80 ~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 159 (400)
++..++.++.++++.+=+|...+. |+ ...+.+. ..-.++.++.+...... ++ =....
T Consensus 2 ~~a~~va~~~fGs~~vPvK~~~~g-Dg---~~fQw~~--~~~i~~~g~~v~~~~~~--p~---------------f~p~a 58 (254)
T PF07857_consen 2 YIACIVAVLFFGSNFVPVKKFDTG-DG---FFFQWVM--CSGIFLVGLVVNLILGF--PP---------------FYPWA 58 (254)
T ss_pred chhHHHHHHHhcccceeeEeccCC-Cc---HHHHHHH--HHHHHHHHHHHHHhcCC--Cc---------------ceeHH
Confidence 456777788889998777765542 22 1111111 12223334433333221 11 01124
Q ss_pred HHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHH-H-HhcC-----CccHHHHHHHHHHHHhhheeeccccc
Q psy11593 160 GVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAI-I-LLKK-----KISKIQWISLVILVVGVALVQLSSVV 232 (400)
Q Consensus 160 ~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~-~-~L~e-----rls~~qwlal~l~~~GVviv~~~~~~ 232 (400)
.+.|++.+.+|.+..-.++.+..+...++..+.-+.+.-..- + +++. +-.+..++|+++.++|..+...-...
T Consensus 59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 566789999999999999999999999999986666654432 2 3332 24567888999999998877531110
Q ss_pred c-------c------C------CC----Cc--------ccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11593 233 E-------K------A------RP----AD--------FVENRMLGFAATILACLLSGLAGVYFEMILK 270 (400)
Q Consensus 233 ~-------~------~------~~----~~--------~~~~~~~G~l~~l~aa~~~al~~V~~ekllk 270 (400)
. + + ++ ++ ...+...|.++++++.+++|...+=.+.+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~ 207 (254)
T PF07857_consen 139 EKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQD 207 (254)
T ss_pred CCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHh
Confidence 0 0 0 00 00 1114678888888888888887765654433
No 105
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=86.51 E-value=1.3 Score=36.08 Aligned_cols=41 Identities=12% Similarity=0.376 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593 342 KGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL 382 (400)
Q Consensus 342 ~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l 382 (400)
|.+-...+..+-+.+++++++|++++.++.|.+++++|++.
T Consensus 65 Ki~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 65 KIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 33344556666677888999999999999999999999875
No 106
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.31 E-value=22 Score=31.04 Aligned_cols=127 Identities=17% Similarity=0.139 Sum_probs=71.8
Q ss_pred HHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHhhhhcccCcccchhhHHHH
Q psy11593 84 ITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFINLVRAHTIQNPLDTLKVGVPA 163 (400)
Q Consensus 84 ~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~a 163 (400)
.++..|.+.|.-+.|+.++ ++..+.+-|....+.+++...+ .++..... . .++..|...++|
T Consensus 15 ~~l~~Q~~iN~qL~~~~~s-----pl~As~isf~vGt~~L~~l~l~--~~~~~~~a-~----------~~~~pwW~~~GG 76 (150)
T COG3238 15 ALLPLQAAINGRLARYLGS-----PLLASLISFLVGTVLLLILLLI--KQGHPGLA-A----------VASAPWWAWIGG 76 (150)
T ss_pred hhhhhHHHHHHHHHHHcCC-----hHHHHHHHHHHHHHHHHHHHHH--hcCCCchh-h----------ccCCchHHHHcc
Confidence 3466777777666666553 3455555566655544433332 33321111 0 012223345556
Q ss_pred HHHHHHHHHHHHHhhcCChHHHHHHh-hhhHHHHHHHHHHHh----cCCccHHHHHHHHHHHHhhheeec
Q psy11593 164 LLYVIQNNLLYISASNLDAATSQVTY-QLKILTTAIFAIILL----KKKISKIQWISLVILVVGVALVQL 228 (400)
Q Consensus 164 ~l~~~~~~l~~~al~~l~~s~~~ll~-~~~pl~tal~s~~~L----~erls~~qwlal~l~~~GVviv~~ 228 (400)
++.+..-.........+.+++...+. ..+.+.-.++-.+=+ ++++++.+++++++.++|+.+++.
T Consensus 77 ~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 77 LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 66555555555666777666655544 445555444444322 488999999999999999776654
No 107
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.52 E-value=26 Score=28.20 Aligned_cols=41 Identities=7% Similarity=0.367 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHh
Q psy11593 343 GFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLY 383 (400)
Q Consensus 343 ~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly 383 (400)
..-...+..+-..+|++.++|++.+.++.|..+++.|+++.
T Consensus 73 ~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 73 TMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 33344455566788999999999999999999999998764
No 108
>PRK02237 hypothetical protein; Provisional
Probab=74.20 E-value=21 Score=29.22 Aligned_cols=49 Identities=8% Similarity=-0.017 Sum_probs=37.4
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 340 ILKGFATSLAI--VLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 340 i~~~~~~~~~~--v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
--+..+.|-.+ +.+.+.+|.+-|++||.+-++|.++++.|+.+....|+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 45566666554 45567788888999999999999999999876655554
No 109
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=72.69 E-value=1.2 Score=42.61 Aligned_cols=107 Identities=21% Similarity=0.411 Sum_probs=0.0
Q ss_pred HHHHHHHHHH-HHHhhcCChHHHHHHhhhhHHHHHHHHHH-HhcCC-ccHHHHHHHHHHHHhhheeecccccccCCCCcc
Q psy11593 164 LLYVIQNNLL-YISASNLDAATSQVTYQLKILTTAIFAII-LLKKK-ISKIQWISLVILVVGVALVQLSSVVEKARPADF 240 (400)
Q Consensus 164 ~l~~~~~~l~-~~al~~l~~s~~~ll~~~~pl~tal~s~~-~L~er-ls~~qwlal~l~~~GVviv~~~~~~~~~~~~~~ 240 (400)
++..++-..+ |+-++-++-+...++++...+.+.++-.+ ++||| +-+.-.+|+++.++-.++...-...
T Consensus 30 llll~ail~w~~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLt-------- 101 (381)
T PF05297_consen 30 LLLLVAILVWFFIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLT-------- 101 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhh--------
Confidence 3333333333 45556677777788887766665554443 34555 4556666776666555544332221
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHH
Q psy11593 241 VENRMLGFAATILACLLSGLAGVYFEMILKGSDVSIWMR 279 (400)
Q Consensus 241 ~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~~~~~~ 279 (400)
....+.|+++.++++++.-....|.+ ++++++.+.|..
T Consensus 102 GQ~LF~Gi~~l~l~~lLaL~vW~Ym~-lLr~~GAs~Wti 139 (381)
T PF05297_consen 102 GQTLFVGIVILFLCCLLALGVWFYMW-LLRELGASFWTI 139 (381)
T ss_dssp ---------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHH
Confidence 23567888777766666555556644 778877777643
No 110
>KOG2234|consensus
Probab=72.04 E-value=1.1e+02 Score=30.45 Aligned_cols=61 Identities=15% Similarity=0.142 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 324 ASGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 324 al~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
++-.-+......+.|+.+-.....+.++.+++++++++++.++..||...++-.+|+.+..
T Consensus 103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 3444445556788898888888889999999999999999999999999999999998877
No 111
>KOG4831|consensus
Probab=71.22 E-value=6 Score=32.23 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHH
Q psy11593 321 LLNASGGLIVAVVVKYADN-ILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFL 382 (400)
Q Consensus 321 ~~~al~g~~~~~~~k~~~a-i~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~l 382 (400)
+..-++..++...+..++- ....+.++++..++++.|..+-.|...-..++|..++++|+++
T Consensus 60 llNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 60 LLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3333444444444444442 2333556778889999999988888888999999999999876
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=70.51 E-value=7.4 Score=31.78 Aligned_cols=51 Identities=12% Similarity=0.038 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHH--HHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 338 DNILKGFATSLAI--VLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 338 ~ai~~~~~~~~~~--v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
++--+..+.|-.+ +.+.+.++.+-+++||.+-++|.++++.|+.+....|+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 4445666666554 46667788888999999999999999999876655554
No 113
>KOG3912|consensus
Probab=65.84 E-value=20 Score=34.56 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 325 SGGLIVAVVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 325 l~g~~~~~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
.|..++...+.+..+..-...--..++|+.++|..+++.+++..+|+|...|+.|+.+..
T Consensus 98 ~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 98 AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 344333333333333333333344568999999999999999999999999999976543
No 114
>KOG4831|consensus
Probab=62.45 E-value=11 Score=30.66 Aligned_cols=69 Identities=23% Similarity=0.316 Sum_probs=53.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCChHHHH-HHhhhhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhhhee
Q psy11593 157 LKVGVPALLYVIQNNLLYISASNLDAATSQ-VTYQLKILTTAIFAIILLKKK-ISKIQWISLVILVVGVALV 226 (400)
Q Consensus 157 ~~~~i~a~l~~~~~~l~~~al~~l~~s~~~-ll~~~~pl~tal~s~~~L~er-ls~~qwlal~l~~~GVviv 226 (400)
+.|.+|-.+.-..+.++|.-+++.|.+.+. +.+++...|++++...+ ||+ ...+-.+|..+.++|+.+.
T Consensus 53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccceeehhhhHHhhhhhhe
Confidence 358888888888889999999998876654 55678999999998876 655 5566677777777777543
No 115
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=61.17 E-value=2.7e+02 Score=30.98 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=33.1
Q ss_pred HHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 183 ATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 183 s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
+-+.++..+.|+-.|.++...+.+|-+..-+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 34467888999999999999887775555566777777787655
No 116
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=60.17 E-value=32 Score=28.02 Aligned_cols=52 Identities=12% Similarity=0.020 Sum_probs=35.8
Q ss_pred hhhHHHHHHHHHHHHH--HHHHHHHHhcccccHhHHHHHHHHHHHHHHhccCCC
Q psy11593 337 ADNILKGFATSLAIVL--ACVFQVYLFAFVITFQFIVGAFFVMCSVFLYSRTPS 388 (400)
Q Consensus 337 ~~ai~~~~~~~~~~v~--a~lls~llfge~~t~~~liG~~lVi~gv~ly~~~~~ 388 (400)
..+--+..+.+-.+.+ +.+..++.=+..||.+-++|.++.++|+.+....|+
T Consensus 54 ~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 54 AAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred chhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 3445566666666544 444455555999999999999999999765555444
No 117
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=59.91 E-value=26 Score=28.61 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 194 LTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 194 l~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
..-++++.+++||++++.+..|-+....+|..+
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred heeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 344578899999999999999998888777654
No 118
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=55.93 E-value=1.6e+02 Score=26.78 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=17.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhcCChHH
Q psy11593 155 DTLKVGVPALLYVIQNNLLYISASNLDAAT 184 (400)
Q Consensus 155 ~~~~~~i~a~l~~~~~~l~~~al~~l~~s~ 184 (400)
.++++...+++..+.....+...+.+|+..
T Consensus 145 ~~~k~~~~~~~~~~~w~~~~~~~~~lp~~i 174 (206)
T PF06570_consen 145 SWWKYILISVLAMVLWIVIFVLTSFLPPVI 174 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 445555555555556666666666666553
No 119
>PRK02237 hypothetical protein; Provisional
Probab=51.10 E-value=25 Score=28.84 Aligned_cols=39 Identities=15% Similarity=0.390 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecc
Q psy11593 191 LKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 191 ~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~ 229 (400)
.-++...+..+..-|+|.++++|+|..+.++|+.++...
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 344445577788889999999999999999999888654
No 120
>KOG1443|consensus
Probab=49.84 E-value=2e+02 Score=28.32 Aligned_cols=68 Identities=25% Similarity=0.411 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhhee
Q psy11593 159 VGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALV 226 (400)
Q Consensus 159 ~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv 226 (400)
...+|.+-++--..-|.=+..++.-+.++..-.+-+.+.+++...++++++...|.|+.+...|+..-
T Consensus 246 i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 246 ISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 44445554555556666777888888888888999999999999999999999999999999999876
No 121
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.47 E-value=47 Score=27.17 Aligned_cols=41 Identities=20% Similarity=0.447 Sum_probs=33.6
Q ss_pred hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 190 QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 190 ~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
..-++...+..+.+=|+|.++.+|+|..+.++|+.++...+
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 34555666677888899999999999999999999987643
No 122
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=39.89 E-value=4.9e+02 Score=28.09 Aligned_cols=22 Identities=27% Similarity=0.833 Sum_probs=17.4
Q ss_pred ccHHHHHHHHHHHHhhheeecc
Q psy11593 208 ISKIQWISLVILVVGVALVQLS 229 (400)
Q Consensus 208 ls~~qwlal~l~~~GVviv~~~ 229 (400)
+...+|+|+++...|+.++..+
T Consensus 236 l~~lD~IG~~L~~~Gl~LfLlg 257 (599)
T PF06609_consen 236 LKELDWIGIFLFIAGLALFLLG 257 (599)
T ss_pred HHHhhHHHHHHHHHHHHHHHHH
Confidence 4455799999999999888544
No 123
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=39.61 E-value=2e+02 Score=23.55 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=32.0
Q ss_pred hhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeeccc
Q psy11593 190 QLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSS 230 (400)
Q Consensus 190 ~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~ 230 (400)
..-+....+..++.=|.|.++++|.|-.+.++|+.++..++
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 34455555556666689999999999999999998887654
No 124
>PF03023 MVIN: MviN-like protein; InterPro: IPR004268 This entry represents MviN, a family of integral membrane proteins predicted to have ten or more transmembrane regions. Although frequently listed as a virulence protein, it is not restricted to pathogens and it is an essential protein in Sinorhizobium meliloti. In a number of species its gene is adjacent to that of the uridylyltransferase GlnD, the signal-transducing enzyme that performs the key modification to the nitrogen regulatory protein PII []. Disruption of the MviN open reading frame results in flagellar structures that contain only the basal body and hook complex that lack the flagellum; suggesting that MviN might be involved in flagellin export or assembly []. Genome comparison studies led to MviN being predicted to be a peptidoglycan lipid II flippase though currently there is no direct evidence to support this annotation [].
Probab=38.85 E-value=4.5e+02 Score=26.93 Aligned_cols=35 Identities=17% Similarity=0.340 Sum_probs=18.7
Q ss_pred HHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCcc
Q psy11593 175 ISASNLDAATSQVTYQLKILTTAIFAIILLKKKIS 209 (400)
Q Consensus 175 ~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls 209 (400)
.-.......-..+-....-...+++.+..++||..
T Consensus 371 ~l~~~~g~~Glala~sl~~~i~~~~l~~~l~r~~~ 405 (451)
T PF03023_consen 371 LLVPFFGVAGLALATSLSAIISALLLYILLRRRLG 405 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33344443333444445555566666777777664
No 125
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.65 E-value=1.7e+02 Score=23.73 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCccHHHHHHHHHHHHhhheee
Q psy11593 197 AIFAIILLKKKISKIQWISLVILVVGVALVQ 227 (400)
Q Consensus 197 al~s~~~L~erls~~qwlal~l~~~GVviv~ 227 (400)
..|+.+++||.+++.++.+-.+...|+..+.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999988888876653
No 126
>KOG1582|consensus
Probab=36.08 E-value=1.2e+02 Score=29.27 Aligned_cols=54 Identities=17% Similarity=0.192 Sum_probs=44.2
Q ss_pred hcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhheeecccc
Q psy11593 178 SNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVGVALVQLSSV 231 (400)
Q Consensus 178 ~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~GVviv~~~~~ 231 (400)
+...+.++..+...+=..|.+++++++.+.++....-+..+.+.|+.+-..+..
T Consensus 282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 334566666666777777889999999999999999999999999988877653
No 127
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=35.39 E-value=1.8e+02 Score=22.22 Aligned_cols=16 Identities=31% Similarity=0.493 Sum_probs=9.6
Q ss_pred HhccCCCCCCCCCCCC
Q psy11593 382 LYSRTPSSKPKPPRAK 397 (400)
Q Consensus 382 ly~~~~~~~~~~~~~~ 397 (400)
.|+++|.+...|++++
T Consensus 58 ~y~r~p~~W~~~~~~~ 73 (76)
T PF06645_consen 58 FYNRHPLKWLPPKPEK 73 (76)
T ss_pred hhcCCcccCCCCCccc
Confidence 5777777765554443
No 128
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=34.09 E-value=4.3e+02 Score=27.23 Aligned_cols=60 Identities=28% Similarity=0.327 Sum_probs=38.6
Q ss_pred HhcCCccHHHHHHHHHHHHh--hheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy11593 203 LLKKKISKIQWISLVILVVG--VALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDV 274 (400)
Q Consensus 203 ~L~erls~~qwlal~l~~~G--Vviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~ 274 (400)
+-|.|+.+.|++=++++.+= ++++..++ +...+....+.|+.+.++.+.|...++|+...
T Consensus 318 ~~~~~iHpiQY~LVGlAl~lFYlLLLSlSE------------hi~F~~AYliAa~a~i~Li~~Y~~~vl~~~k~ 379 (430)
T PF06123_consen 318 LSKLRIHPIQYLLVGLALVLFYLLLLSLSE------------HIGFNLAYLIAALACIGLISLYLSSVLKSWKR 379 (430)
T ss_pred HhcCcccHHHHHHHHHHHHHHHHHHHHHHh------------hhchHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 34788999998654443322 22222222 22345667788888889999999999987643
No 129
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=27.04 E-value=5.7e+02 Score=24.54 Aligned_cols=18 Identities=17% Similarity=0.427 Sum_probs=9.1
Q ss_pred CccHHHHHHHHHHHHhhh
Q psy11593 207 KISKIQWISLVILVVGVA 224 (400)
Q Consensus 207 rls~~qwlal~l~~~GVv 224 (400)
+.++.||......++|-.
T Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (405)
T TIGR00891 5 HLTRAQWNAFSAAWLGWL 22 (405)
T ss_pred cCCcccHHHHHHHHHHHH
Confidence 445555555555544443
No 130
>KOG1442|consensus
Probab=26.80 E-value=47 Score=32.06 Aligned_cols=137 Identities=12% Similarity=0.076 Sum_probs=81.5
Q ss_pred hHHHHHHHHHHHHHhhHHHHHHHHccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhHH--HhhhhcccCc
Q psy11593 76 FMLKTTSLITLTLQNAIVSLSMRYARMKNKDELFISSTGVLMAEVVKLVVCLGLVFADEGFHVGRFIN--LVRAHTIQNP 153 (400)
Q Consensus 76 ~~~~~l~l~ll~~~~~~~~l~~k~s~~~~~~~~~~~~~~vf~~e~~klli~l~~l~~~~~~~~~~~~~--~l~~~~~~~~ 153 (400)
...+.++=++..+.-+.+.+.+|-.-...++ .....-...++..++..++++...+ +++.... +++ +.
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~---~iw~lt~ynnv~a~lLflpll~lng--e~~~v~~~~~l~-----a~ 252 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGD---CIWRLTAYNNVNALLLFLPLLILNG--EFQAVVGFPHLP-----AI 252 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccC---eehhhHHHHHHHHHHHHHHHHHHcc--hHHHHcCcccch-----HH
Confidence 4555555555566666677776632211112 1222335556666666777665543 2332111 111 11
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhcCChHHHHHHhhhhHHHHHHHHHHHhcCCccHHHHHHHHHHHHh
Q psy11593 154 LDTLKVGVPALLYVIQNNLLYISASNLDAATSQVTYQLKILTTAIFAIILLKKKISKIQWISLVILVVG 222 (400)
Q Consensus 154 ~~~~~~~i~a~l~~~~~~l~~~al~~l~~s~~~ll~~~~pl~tal~s~~~L~erls~~qwlal~l~~~G 222 (400)
+=|..+.+.|++.+.-++...+=++-.+|-+..+-...+-..=.+++..+++|-.+...|-+-++.+.|
T Consensus 253 ~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 253 KFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred HHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 223335666777666666666777778888888877788888889999999999999998655444433
No 131
>PRK11715 inner membrane protein; Provisional
Probab=26.28 E-value=6.8e+02 Score=25.89 Aligned_cols=58 Identities=24% Similarity=0.284 Sum_probs=37.0
Q ss_pred cCCccHHHHHHHHHHHH--hhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q psy11593 205 KKKISKIQWISLVILVV--GVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILKGSDV 274 (400)
Q Consensus 205 ~erls~~qwlal~l~~~--GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk~~~~ 274 (400)
|.|+-+.|++=++++.+ =++++..++ +...+...++.|+.|.++-+.|...++|+...
T Consensus 326 ~~~iHpiQYlLVGlAl~lFYLLLLSlSE------------HigF~~AYliAa~a~v~li~~Y~~~vl~~~k~ 385 (436)
T PRK11715 326 KLRIHPVQYLLVGLALVLFYLLLLSLSE------------HIGFTLAYLIAALACVLLIGFYLSAVLRSWKR 385 (436)
T ss_pred CceecHHHHHHHHHHHHHHHHHHHHHHh------------hhchHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 67888888864443332 222222222 23345667788888889999999999887643
No 132
>KOG1619|consensus
Probab=26.27 E-value=5.6e+02 Score=24.20 Aligned_cols=17 Identities=18% Similarity=0.518 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHhcc
Q psy11593 369 FIVGAFFVMCSVFLYSR 385 (400)
Q Consensus 369 ~liG~~lVi~gv~ly~~ 385 (400)
-.+|..+++.|+.+...
T Consensus 207 n~~gv~~il~g~~Vl~~ 223 (245)
T KOG1619|consen 207 NFLGVFIILFGVLVLTL 223 (245)
T ss_pred HHHHHHHHHHHHHheEE
Confidence 46788888888544443
No 133
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=25.87 E-value=45 Score=26.12 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=22.9
Q ss_pred cccHhHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q psy11593 364 VITFQFIVGAFFVMCSVFLYSRTPSSKPKPPRA 396 (400)
Q Consensus 364 ~~t~~~liG~~lVi~gv~ly~~~~~~~~~~~~~ 396 (400)
..++..++|.+++++|..+|..+..+++-..+.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev~Rd~ 36 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPEVSRDY 36 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcchhhhh
Confidence 467788999999998888887555444444433
No 134
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=24.43 E-value=2.6e+02 Score=19.87 Aligned_cols=44 Identities=16% Similarity=0.299 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhhheeecccccccCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11593 212 QWISLVILVVGVALVQLSSVVEKARPADFVENRMLGFAATILACLLSGLAGVYFEMILK 270 (400)
Q Consensus 212 qwlal~l~~~GVviv~~~~~~~~~~~~~~~~~~~~G~l~~l~aa~~~al~~V~~ekllk 270 (400)
..+|..+..+|++++..|+. |.+.++++-...|......++.++
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp---------------G~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP---------------GLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC---------------cHHHHHHHHHHHHHhhHHHHHHHH
Confidence 45678888899998877753 445555555556655556666544
No 135
>PF07822 Toxin_13: Neurotoxin B-IV-like protein; InterPro: IPR012497 The members of this family resemble neurotoxin B-IV (P01525 from SWISSPROT), which is a crustacean-selective neurotoxin produced by the marine worm Cerebratulus lacteus. This highly cationic peptide is approximately 55 residues and is arranged to form two antiparallel helices connected by a well-defined loop in a hairpin structure. The branches of the hairpin are linked by four disulphide bonds. Three residues identified as being important for activity, namely Arg-17, -25 and -34, are found on the same face of the molecule, while another residue important for activity, Trp30, is on the opposite side. The protein's mode of action is not entirely understood, but it may act on voltage-gated sodium channels, possibly by binding to an as yet uncharacterised site on these proteins. Its site of interaction may also be less specific, for example it may interact with negatively charged membrane lipids []. ; GO: 0019871 sodium channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1VIB_A.
Probab=24.24 E-value=18 Score=24.80 Aligned_cols=13 Identities=31% Similarity=0.536 Sum_probs=9.7
Q ss_pred CCccccccccccC
Q psy11593 47 PYPKEFYNCKLAT 59 (400)
Q Consensus 47 ~~~~~~~~~~~~~ 59 (400)
+||-||++|+-.-
T Consensus 8 ~ypacenncrk~y 20 (55)
T PF07822_consen 8 SYPACENNCRKQY 20 (55)
T ss_dssp TTTHHHHHHHHHH
T ss_pred cChhhHhhHHHHh
Confidence 5789999987443
No 136
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.82 E-value=5.5e+02 Score=23.24 Aligned_cols=24 Identities=21% Similarity=0.341 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q psy11593 247 GFAATILACLLSGLAGVYFEMILK 270 (400)
Q Consensus 247 G~l~~l~aa~~~al~~V~~ekllk 270 (400)
|+...++.++..|+...+.-+.+.
T Consensus 112 gi~tli~~~i~~G~~~~~~~~~i~ 135 (206)
T PF06570_consen 112 GIITLILVSIVGGLVFYFIFKYIY 135 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666666666666655554444
No 137
>KOG4314|consensus
Probab=22.03 E-value=1.3e+02 Score=27.68 Aligned_cols=53 Identities=6% Similarity=0.043 Sum_probs=41.1
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccHhHHHHHHHHHHHHHHhc
Q psy11593 332 VVVKYADNILKGFATSLAIVLACVFQVYLFAFVITFQFIVGAFFVMCSVFLYS 384 (400)
Q Consensus 332 ~~~k~~~ai~~~~~~~~~~v~a~lls~llfge~~t~~~liG~~lVi~gv~ly~ 384 (400)
..+|..++...+-...+.-.+..+++|+.+++++....++.+++-+.|+.+..
T Consensus 72 ~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmia 124 (290)
T KOG4314|consen 72 LALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIA 124 (290)
T ss_pred HHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEE
Confidence 34555655555555667778888999999999999999999999988876544
No 138
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=20.61 E-value=1.5e+02 Score=18.26 Aligned_cols=21 Identities=10% Similarity=0.279 Sum_probs=11.6
Q ss_pred ccHhHHHHHHHHHHHHHHhcc
Q psy11593 365 ITFQFIVGAFFVMCSVFLYSR 385 (400)
Q Consensus 365 ~t~~~liG~~lVi~gv~ly~~ 385 (400)
-.+..++|.+++..+.+++.+
T Consensus 10 ~~~~~~~G~~l~~~~~~~~~~ 30 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLLLRK 30 (34)
T ss_pred cHHHHHHHHHHHHHHHHHhee
Confidence 344566777555555555443
Done!