Query psy11597
Match_columns 317
No_of_seqs 190 out of 1482
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 22:43:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11597.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11597hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1262|consensus 100.0 4E-59 8.7E-64 426.8 13.9 316 1-317 159-524 (543)
2 TIGR01679 bact_FAD_ox FAD-link 100.0 2.2E-41 4.7E-46 328.0 18.6 295 1-316 107-415 (419)
3 TIGR01678 FAD_lactone_ox sugar 100.0 4.8E-38 1E-42 305.4 18.6 302 2-313 114-438 (438)
4 TIGR01676 GLDHase galactonolac 100.0 1.7E-36 3.7E-41 297.4 18.7 304 1-315 160-536 (541)
5 TIGR01677 pln_FAD_oxido plant- 100.0 1.5E-34 3.2E-39 286.9 20.3 307 2-315 136-505 (557)
6 PLN02441 cytokinin dehydrogena 100.0 1.4E-34 3.1E-39 284.0 16.9 298 1-311 173-512 (525)
7 PLN02465 L-galactono-1,4-lacto 100.0 6.4E-34 1.4E-38 281.3 18.0 305 1-315 195-566 (573)
8 KOG1231|consensus 99.9 6.2E-24 1.3E-28 199.2 11.1 288 1-310 170-491 (505)
9 KOG4730|consensus 99.9 1.8E-21 3.8E-26 182.8 19.9 307 1-314 148-507 (518)
10 PF04030 ALO: D-arabinono-1,4- 99.9 2.2E-22 4.7E-27 183.6 9.6 128 188-316 124-257 (259)
11 PLN00107 FAD-dependent oxidore 99.8 4.5E-19 9.8E-24 157.7 11.6 125 189-315 61-199 (257)
12 PLN02805 D-lactate dehydrogena 99.7 2E-16 4.2E-21 157.9 11.6 269 8-310 241-543 (555)
13 COG0277 GlcD FAD/FMN-containin 99.7 2.4E-16 5.1E-21 154.6 10.3 281 3-314 134-454 (459)
14 PRK11230 glycolate oxidase sub 99.6 2.1E-15 4.6E-20 149.4 8.1 64 9-72 166-233 (499)
15 TIGR00387 glcD glycolate oxida 99.5 4.2E-14 9E-19 137.4 10.1 72 11-82 110-191 (413)
16 PRK11282 glcE glycolate oxidas 99.4 2.1E-13 4.5E-18 129.1 6.4 69 4-72 98-172 (352)
17 PF09265 Cytokin-bind: Cytokin 99.3 9.4E-12 2E-16 113.4 7.6 125 185-311 137-275 (281)
18 KOG1232|consensus 98.5 1.8E-07 3.9E-12 87.2 5.6 78 3-80 193-278 (511)
19 PRK13905 murB UDP-N-acetylenol 98.4 1.7E-07 3.7E-12 87.3 3.7 65 3-70 126-193 (298)
20 KOG1233|consensus 98.2 1.5E-06 3.3E-11 81.4 4.3 71 10-80 276-355 (613)
21 PRK11183 D-lactate dehydrogena 97.3 0.00019 4.1E-09 71.2 3.5 64 11-76 156-273 (564)
22 PRK14652 UDP-N-acetylenolpyruv 97.0 0.00055 1.2E-08 63.9 3.6 65 3-71 131-197 (302)
23 PRK12436 UDP-N-acetylenolpyruv 96.7 0.0018 3.9E-08 60.6 4.1 64 3-69 131-197 (305)
24 PRK13903 murB UDP-N-acetylenol 96.5 0.0021 4.5E-08 61.5 3.6 75 4-81 129-210 (363)
25 PRK13906 murB UDP-N-acetylenol 96.3 0.003 6.6E-08 59.1 3.1 64 3-69 131-197 (307)
26 PF02913 FAD-oxidase_C: FAD li 96.0 0.0086 1.9E-07 53.2 4.3 109 191-310 130-243 (248)
27 PF08031 BBE: Berberine and be 95.6 0.0047 1E-07 41.2 0.8 27 287-313 14-43 (47)
28 TIGR00179 murB UDP-N-acetyleno 94.2 0.04 8.6E-07 51.1 3.3 64 3-69 108-175 (284)
29 PRK14653 UDP-N-acetylenolpyruv 93.2 0.11 2.5E-06 48.4 4.4 63 3-70 127-194 (297)
30 PRK14649 UDP-N-acetylenolpyruv 93.1 0.093 2E-06 48.9 3.6 65 3-70 118-193 (295)
31 PRK00046 murB UDP-N-acetylenol 83.7 1.2 2.5E-05 42.4 3.6 64 3-69 118-188 (334)
32 COG0812 MurB UDP-N-acetylmuram 83.0 2.3 5.1E-05 39.4 5.2 62 5-69 119-183 (291)
33 PRK14651 UDP-N-acetylenolpyruv 82.7 1.9 4.1E-05 39.8 4.5 64 3-70 106-171 (273)
34 PRK14650 UDP-N-acetylenolpyruv 81.5 2.1 4.5E-05 40.0 4.4 66 3-71 128-196 (302)
35 PF09129 Chol_subst-bind: Chol 62.9 16 0.00035 33.7 5.2 77 236-314 214-315 (321)
36 PRK11282 glcE glycolate oxidas 61.5 5.8 0.00013 37.9 2.3 49 262-311 293-344 (352)
37 KOG1233|consensus 58.9 51 0.0011 32.0 7.9 110 193-313 484-610 (613)
38 PRK14648 UDP-N-acetylenolpyruv 57.3 14 0.0003 35.4 4.0 65 3-70 129-237 (354)
39 PF03392 OS-D: Insect pheromon 49.8 6.6 0.00014 30.1 0.5 18 295-312 76-93 (95)
40 PRK13904 murB UDP-N-acetylenol 34.7 39 0.00084 30.9 3.1 59 3-70 101-160 (257)
41 PF02209 VHP: Villin headpiece 27.9 24 0.00052 22.0 0.4 19 282-300 1-21 (36)
42 PF08077 Cm_res_leader: Chlora 21.1 1.1E+02 0.0025 15.2 2.0 14 51-64 3-16 (17)
43 PF11582 DUF3240: Protein of u 20.7 1.3E+02 0.0027 23.3 3.3 37 189-225 59-98 (102)
44 PF04244 DPRP: Deoxyribodipyri 20.4 1.1E+02 0.0023 27.4 3.2 48 258-305 103-159 (224)
45 PRK02539 hypothetical protein; 20.2 24 0.00051 26.5 -0.8 22 16-37 42-63 (85)
No 1
>KOG1262|consensus
Probab=100.00 E-value=4e-59 Score=426.82 Aligned_cols=316 Identities=41% Similarity=0.843 Sum_probs=283.8
Q ss_pred CceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCC-CCcchhhhcccCCCCcEEEEEEEEEEEecccE-EEEE-C
Q psy11597 1 GIVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEE-EDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV-RARL-G 77 (317)
Q Consensus 1 G~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~-~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~-~~~~-~ 77 (317)
|++.|.|+.++||+||++.+.+++.|||++||++++|.++ +++|||.|+.+|-|++|..+.+||+++|+.++ +++| +
T Consensus 159 GLinG~Gies~ShkyGlfq~~~~aYEvVladGelv~~t~dne~sdLfyaiPWSqGTlgfLVaatiriIkvK~Yvkltyip 238 (543)
T KOG1262|consen 159 GLINGVGIESSSHKYGLFQHICTAYEVVLADGELVRVTPDNEHSDLFYAIPWSQGTLGFLVAATIRIIKVKKYVKLTYIP 238 (543)
T ss_pred ceeeecccccccchhhhHHhhhheeEEEecCCeEEEecCCcccCceEEEcccccCchheeeeeEEEEEeccceEEEEEEe
Confidence 7889999999999999999999999999999999999885 89999999999999999999999999999999 9999 5
Q ss_pred CCC--ccc----cc---ccC-CCCCCeEEEEEecCCCc----ceeecc-ccccccccccee---E---------------
Q psy11597 78 CEK--GFP----VI---YDK-EEDRDLFHAIPWSYGTL----GFLTAV-EIQIIPVKNIRI---L--------------- 124 (317)
Q Consensus 78 ~~~--~~~----~~---~~~-~~~~~~~~~~~~~~~~~----g~~~~~-~~~~~~~~~~~~---~--------------- 124 (317)
... ++. +. .+. .+.+||+++++++++.+ |.++|. +... ..+.|.+ |
T Consensus 239 ~~~l~e~c~k~~e~~~dsdkntk~~dfvE~liyn~~egviMvG~fad~~dak~-~~kvN~vgwwyKpWFykHvet~lkkg 317 (543)
T KOG1262|consen 239 VHGLDEYCKKITELSGDSDKNTKNADFVEGLIYNKNEGVIMVGNFADKVDAKS-NAKVNDVGWWYKPWFYKHVETFLKKG 317 (543)
T ss_pred cccHHHHHHHHHhhcccccccccccchhheeeecCCccEEEEEeccCcccccc-ccccccchhhhhhHHHHHHHHHHhcC
Confidence 543 121 11 112 25679999999999988 777772 2221 1244432 1
Q ss_pred -EeceeecccchhcccCCceeeeeeecccCCcceehhhccccCCchhhhhcccccccccccccCCCceEEEeechhcHHH
Q psy11597 125 -HHLHVPILDYYHRFSTSLFWEIQDIVPFGNHPLFRYLLGWLMPPKVALLKLTQTQTIKNLYDKHHVVQDYLVPIEELRS 203 (317)
Q Consensus 125 -~~~~~~~~~y~~r~~~~~~w~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~qd~~IP~~~~~~ 203 (317)
.++++|+.+|++|+++++||..+.++|||+|+++|.+++|++||+.++++..+...++++|...|++||+.||+++..+
T Consensus 318 e~~EYIPlr~YyhRHtrsifWe~~~iiPFGn~~~FRyllgWl~PPKia~LKaTt~ealRkly~~~hV~QDmlvPl~kl~e 397 (543)
T KOG1262|consen 318 EGEEYIPLRSYYHRHTRSIFWELEDIIPFGNNPVFRYLLGWLCPPKIAFLKATTGEALRKLYFAKHVFQDMLVPLDKLKE 397 (543)
T ss_pred CCceeeeHHHHHHhccceeEEeeeeeeecCCcHHHHHHHHhcCCChHHHhhcccHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 1789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCeeeeeeeecCCC--CCCCCC-------CCCCCeeEEEeeecCC----CCCCcchhHHHHHHHHHHHh
Q psy11597 204 CVHYFHDNIQIYPLWICPFLLKDLP--GLVHPA-------KAQDGMYLDLGLYGEP----KAKDYHSKNTITALESYLGK 270 (317)
Q Consensus 204 ~l~~i~~~~~~~p~~l~p~k~~~~~--~~L~~p-------~~~~~~~~d~~~y~~~----~~~~~~~~~~~~~le~~v~~ 270 (317)
+++.+.+++..+|+||||++...+| |.+++| ....+||.|+|+|+.| +.+++...+.+|+||..+++
T Consensus 398 ald~~hke~evYPiwlcP~~l~~qp~~Gq~~~~p~~r~~~~~~~~my~DvGvYg~pg~v~r~e~y~~~~a~RrmEkfvr~ 477 (543)
T KOG1262|consen 398 ALDTFHKEFEVYPIWLCPFRLYSQPGQGQLRPPPKSRLVPGTNASMYNDVGVYGTPGQVERREPYNPTHAMRRMEKFVRS 477 (543)
T ss_pred HHHHHHhhheeeeeeeeeeeccCCCCCceecCCccccCCCCCcceeEEecccccCCccccccCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 888875 7788999999999988 66778889999999999999
Q ss_pred cCCeeccccCCCCChHHHHHhCCchHHHHHHHhcCCCCCCCcccccC
Q psy11597 271 IRGFQMLGAGVYQSYSEFRQNYDHSLYDRVRARLGCEKGFPVIYDKE 317 (317)
Q Consensus 271 ~GGr~yl~k~~~~t~~~f~~~Yp~~~f~~~r~~~DP~~~f~~~~~k~ 317 (317)
.+|.+++|+|++||+++||+||+.+.|.++|.+|.|.+.|+++|||.
T Consensus 478 v~Gfq~~YAd~~m~eeef~eMFd~tLY~~~R~ky~cigaFp~vYdKi 524 (543)
T KOG1262|consen 478 VHGFQMLYADIYMSEEEFWEMFDGTLYNQVRLKYHCIGAFPRVYDKI 524 (543)
T ss_pred ccCcceeehhhhcCHHHHHHHhhhHHHHHHHHHcCccccchHHHHhh
Confidence 99999999999999999999999999999999999999999999983
No 2
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase. This model represents a family of bacterial oxidoreductases with covalently linked FAD, closely related to two different eukaryotic oxidases, L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae.
Probab=100.00 E-value=2.2e-41 Score=328.03 Aligned_cols=295 Identities=16% Similarity=0.233 Sum_probs=203.0
Q ss_pred CceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccE--EEEE-C
Q psy11597 1 GIVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV--RARL-G 77 (317)
Q Consensus 1 G~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~--~~~~-~ 77 (317)
|-++|+|+||+++++|.++++|++++||++||++++||+++|+|||||++||+|+|||||++|||++|++++ .... +
T Consensus 107 GG~ia~~~hG~g~~~G~~~d~V~~l~vV~a~G~v~~~~~~~~~dLf~a~~g~~G~lGVIt~vtl~~~p~~~~~~~~~~~~ 186 (419)
T TIGR01679 107 GGALGTATHGTGVRFQALHARIVSLRLVTAGGKVLDLSEGDDQDMYLAARVSLGALGVISQVTLQTVALFRLRRRDWRRP 186 (419)
T ss_pred ccceecCCCCCCccCCchhhhEEEEEEEcCCCCEEEEcCCCCHHHHHHHHhCCCceEEEEEEEEEeecceEeEEEEEecC
Confidence 345788889999999999999999999999999999999999999999999999999999999999999997 3333 7
Q ss_pred CCCcccccccCCCCCCeEEEEEecCCCcceeec--ccccccccccceeEEeceeecccchhcccCCceeeeeeecccCCc
Q psy11597 78 CEKGFPVIYDKEEDRDLFHAIPWSYGTLGFLTA--VEIQIIPVKNIRILHHLHVPILDYYHRFSTSLFWEIQDIVPFGNH 155 (317)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~y~~r~~~~~~w~~~~~~p~~~~ 155 (317)
++++++++.......++++.++++....+.+.. ..+. +............+ ..... ..+..+.+ |.. .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~---l~~~~~~~-~~~-~ 256 (419)
T TIGR01679 187 LAQTLERLDEFVDGHRHFEFYVFPFAGKALTITMDRSDE--QPKPRQRDVDENFL---GGLRL---LRQTLRRF-PSL-R 256 (419)
T ss_pred HHHHHHHHHHHHhcCCeEEEEEecCCCeEEEEECCcCCC--cccccccchhhhHH---HHHHH---HHHhcccC-chh-H
Confidence 777665543222345677777776654432221 1110 00000000000000 00000 00001100 100 0
Q ss_pred ceehhhccccCCchhhhhcccccccccccccC---CCceE-EEeechhcHHHHHHHHHhhccC--CCe-eeeeeeecC-C
Q psy11597 156 PLFRYLLGWLMPPKVALLKLTQTQTIKNLYDK---HHVVQ-DYLVPIEELRSCVHYFHDNIQI--YPL-WICPFLLKD-L 227 (317)
Q Consensus 156 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~---~~~~q-d~~IP~~~~~~~l~~i~~~~~~--~p~-~l~p~k~~~-~ 227 (317)
+........++++.+ ....++++|++ .++.| ||+||.+++.++|++|++.+.. .++ +...+|..+ +
T Consensus 257 ~~~~~~~~~~~~~~~------~~~~~~r~~~~~~~~~f~q~e~~iP~~~~~~al~~i~~~i~~~~~~~~~pve~R~~~ad 330 (419)
T TIGR01679 257 PRLNRLMTNMMSSET------VVDRAYKVFATQRKVRFNEMEYHLPRENGRKALQEVIDLVERRSPPVMFPIEVRFSAPD 330 (419)
T ss_pred HHHHHHHHhhcCCce------eeccceEEecccccceeeEEEEecchhHHHHHHHHHHHHHHhcCCCccceEEEEEecCC
Confidence 000111112222222 22334477775 56777 9999999999999999998853 333 344555554 5
Q ss_pred CCCCCCCCCCCCeeEEEeeecCCCCCCcchhHHHHHHHHHHHhcCCeeccccCCCCChHHHHHhCCc-hHHHHHHHhcCC
Q psy11597 228 PGLVHPAKAQDGMYLDLGLYGEPKAKDYHSKNTITALESYLGKIRGFQMLGAGVYQSYSEFRQNYDH-SLYDRVRARLGC 306 (317)
Q Consensus 228 ~~~L~~p~~~~~~~~d~~~y~~~~~~~~~~~~~~~~le~~v~~~GGr~yl~k~~~~t~~~f~~~Yp~-~~f~~~r~~~DP 306 (317)
+++||+..+++++++++-+|. .. ...++++++|++++++||||||+|++.|++++|+++||+ ++|.++|+++||
T Consensus 331 ~~~LS~~~~r~~~~ia~~~~~---~~--~~~~~~~~~e~i~~~~gGRpHwgK~~~l~~~~l~~~YP~~~~F~~~r~~~DP 405 (419)
T TIGR01679 331 DSWLSPFYGRPTCSIAVHQYA---GM--DFESYFRAVEPIFRRYAGRPHWGKRHYLTAATLRERYPRWDDFAAVRDDLDP 405 (419)
T ss_pred CcccCCCCCCCcEEEEEEEcC---CC--CHHHHHHHHHHHHHHcCCCCCchhccCCCHHHHHHHCcCHHHHHHHHHHhCC
Confidence 799998778888887775543 22 368899999999999999999999999999999999998 899999999999
Q ss_pred CCCCCccccc
Q psy11597 307 EKGFPVIYDK 316 (317)
Q Consensus 307 ~~~f~~~~~k 316 (317)
+++|.|.|-+
T Consensus 406 ~g~F~n~~~~ 415 (419)
T TIGR01679 406 DRRFLNPYTR 415 (419)
T ss_pred CCccCCHHHH
Confidence 9999998753
No 3
>TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.
Probab=100.00 E-value=4.8e-38 Score=305.39 Aligned_cols=302 Identities=17% Similarity=0.247 Sum_probs=204.5
Q ss_pred ceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccE--EEEE-CC
Q psy11597 2 IVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV--RARL-GC 78 (317)
Q Consensus 2 ~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~--~~~~-~~ 78 (317)
-++++|+||++.++|+++++|++++||++||++++||+++++|||||++||+|++||||++||+++|.+.+ .... ++
T Consensus 114 G~iatg~hG~~~~~G~~~d~V~~l~vV~~~G~i~~~s~~~~~dlf~a~~~~~G~lGIIt~vtl~l~p~~~l~~~~~~~~~ 193 (438)
T TIGR01678 114 GIISTGTHGSSIKHGILATQVVALTIMTADGEVLECSEERNADVFQAARVSLGCLGIIVTVTIQVVPQFHLQETSFVSTL 193 (438)
T ss_pred ehhcCCCCCCccccCcHHhhEEEEEEEcCCCcEEEeCCCCChhHHHHHhcCCCceEeeEEEEEEEEeccceEEEEecCCH
Confidence 35788899999999999999999999999999999999999999999999999999999999999999998 3333 77
Q ss_pred CCcccccccCCCCCCeEEEEEecCCCcceeec--ccccccccccceeEEeceeecccchhcccCCceeeeeeecccCCcc
Q psy11597 79 EKGFPVIYDKEEDRDLFHAIPWSYGTLGFLTA--VEIQIIPVKNIRILHHLHVPILDYYHRFSTSLFWEIQDIVPFGNHP 156 (317)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~y~~r~~~~~~w~~~~~~p~~~~~ 156 (317)
++.++.......+.+|++.++++....+.+.. ..+.. +.....++.... +...... ...|.++.+ |.. .+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~---~l~~~~~~~-~~~-~~ 265 (438)
T TIGR01678 194 KELLDNWDSHWKSSEFFRVLWFPYTENVVIWRQNKTNKA-PSSPSNSFWDYK--LGFFLYE---FLLWTSKYL-PCL-TP 265 (438)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEECccCCCC-cccccchhhhhh--HHHHHHH---HHHHHHhhc-ccc-cH
Confidence 77666543334567888888888765432111 11110 000001110000 0000000 001111110 111 12
Q ss_pred eehhhcccc-CCchhh--hhccccccccc--ccccCCCceEEEeechhcHHHHHHHHHhhccCC-------Ceeeeeeee
Q psy11597 157 LFRYLLGWL-MPPKVA--LLKLTQTQTIK--NLYDKHHVVQDYLVPIEELRSCVHYFHDNIQIY-------PLWICPFLL 224 (317)
Q Consensus 157 ~~r~~~~~~-~~~~~~--~~~~~~~~~~~--~~y~~~~~~qd~~IP~~~~~~~l~~i~~~~~~~-------p~~l~p~k~ 224 (317)
+..++..+. +.++.. .-..+.++.+. .+.. +....||+||.+++.++|++|.+.+... ..|..++|.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~f-~~~~~Ey~vP~~~~~~al~~l~~~~~~~~~~~~~~v~fpiEvR~ 344 (438)
T TIGR01678 266 WIERFFFWMLYGEKSSTKKESSNLSHKIFTMECRF-SQHVQEWGIPREKTKEALLELKAMLEAHAKNKEVYAHYPVEVRF 344 (438)
T ss_pred HHHHHHHHhhcCCccCCCcceecchHHhhccccee-ehhceeecccHHHHHHHHHHHHHHHHhcccccCceEeeeEEEEE
Confidence 222221111 111000 00000111100 1111 1234599999999999999999887543 356778888
Q ss_pred cCC----CCCCCCCCCCCCeeEEEeeecCCCCCCcchhHHHHHHHHHHHhcCCeeccccCCC-CChHHHHHhCCc-hHHH
Q psy11597 225 KDL----PGLVHPAKAQDGMYLDLGLYGEPKAKDYHSKNTITALESYLGKIRGFQMLGAGVY-QSYSEFRQNYDH-SLYD 298 (317)
Q Consensus 225 ~~~----~~~L~~p~~~~~~~~d~~~y~~~~~~~~~~~~~~~~le~~v~~~GGr~yl~k~~~-~t~~~f~~~Yp~-~~f~ 298 (317)
.+. +.+|||...++++++++-+|.+.. ......++++++|++++++||||||+|.+. +++++++++||+ ++|.
T Consensus 345 ~~~~~~Dd~wLSp~~~rds~~i~~~~y~~~~-~~~~~~~~f~~~E~i~~~~gGRPHWgK~h~~~~~~~l~~~YP~~~~F~ 423 (438)
T TIGR01678 345 TRGTLPDECLLSPCFQVDTCYINAIMYRPFG-KDVPRLDYFLAYETIMKKFGGKPHWAKAHNVCKQKDFEEMYPTLHKFC 423 (438)
T ss_pred eCCCCCCceecCCCCCCceEEEEEEEccCCC-CCCCHHHHHHHHHHHHHHcCCCCCchhcccccCHHHHHHHCcCHHHHH
Confidence 764 489999999999999998877642 112467899999999999999999999999 899999999998 8999
Q ss_pred HHHHhcCCCCCCCcc
Q psy11597 299 RVRARLGCEKGFPVI 313 (317)
Q Consensus 299 ~~r~~~DP~~~f~~~ 313 (317)
++|+++||+|+|+|.
T Consensus 424 ~vr~~~DP~g~F~N~ 438 (438)
T TIGR01678 424 DIRKKLDPTGVFLNS 438 (438)
T ss_pred HHHHhhCcccccCCC
Confidence 999999999999984
No 4
>TIGR01676 GLDHase galactonolactone dehydrogenase. This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.
Probab=100.00 E-value=1.7e-36 Score=297.41 Aligned_cols=304 Identities=12% Similarity=0.074 Sum_probs=201.0
Q ss_pred CceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccE-EEEE--C
Q psy11597 1 GIVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV-RARL--G 77 (317)
Q Consensus 1 G~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~-~~~~--~ 77 (317)
|-+++||+||++.++|+++++|++++||++||++++||+++|+|||||++||+|+|||||++|||++|++.+ +..+ +
T Consensus 160 GGaiatgtHGtg~~~G~l~d~V~~l~lVta~G~vv~~s~~~~pdLF~AargslG~LGVItevTLr~~Pa~~l~~~~~~~~ 239 (541)
T TIGR01676 160 GGIIQVGAHGTGAKLPPIDEQVIAMKLVTPAKGTIEISKDKDPELFFLARCGLGGLGVVAEVTLQCVERQELVEHTFISN 239 (541)
T ss_pred ccccccCCcCCCCCCCCHHHhEEEEEEEECCCCEEEECCCCCHHHHHHHhcCCCceEeEEEEEEEEEeccceeEEEEecC
Confidence 345678999999999999999999999999999999999999999999999999999999999999999998 5555 8
Q ss_pred CCCcccccccCCCCCCeEEEEEecCCCcceee--ccccc-cccccc-ceeEEecee------------------------
Q psy11597 78 CEKGFPVIYDKEEDRDLFHAIPWSYGTLGFLT--AVEIQ-IIPVKN-IRILHHLHV------------------------ 129 (317)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~-~~~~~~-~~~~~~~~~------------------------ 129 (317)
+++.++++.......++++.++|++....... +..+. ..+.+. +.+...+.+
T Consensus 240 ~~e~l~~~~~~~~~~~h~~f~wfP~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (541)
T TIGR01676 240 MKDIKKNHKKFLADNKHVKYLHIPYTDAIVVVTCNPISKSRGPPKFKPKYTSEEAIQHVRDLYRESLKKYRGQVADSASE 319 (541)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCCCceeEEEcCCCCcccCCCCccccccchhhhhhhhhhhhhhhhhhhccccccccc
Confidence 88876654322345667777788876652111 11110 000000 000000000
Q ss_pred --ecccchhcccCCceeeeeeecccCC---cceehhhc--cccCCchhhhhccccccccccccc----CCCceEEEeech
Q psy11597 130 --PILDYYHRFSTSLFWEIQDIVPFGN---HPLFRYLL--GWLMPPKVALLKLTQTQTIKNLYD----KHHVVQDYLVPI 198 (317)
Q Consensus 130 --~~~~y~~r~~~~~~w~~~~~~p~~~---~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~y~----~~~~~qd~~IP~ 198 (317)
.+..+.+.. .++....+ |-.. .+...+.. .|...... ..+.++ ++++ .+..+.||+||.
T Consensus 320 ~~~l~~~~~~~---l~~~~~~~-~~l~~~~~~~in~~~~~~~~~s~~~---~v~~S~---~vf~~~~~f~q~~~EyaiP~ 389 (541)
T TIGR01676 320 EPDIDEFSFTE---LRDKLLAL-DPLNKEHVIEINKAEAEFWRKSEGY---KVGWSD---EILGFDCGGHQWVSETCFPA 389 (541)
T ss_pred ccchhhhHHHH---HHHHHhhC-CcccchhHHHHHHHHHHHhhcCCce---EeCcHH---HhcCcccccceEEEEEEEec
Confidence 000000000 00000000 1000 01122211 22211110 001111 2222 123344999999
Q ss_pred h-------cHHHHHHHHHhhccC---CCeeeeeeeecC-CCCCCCCCCCCC----CeeEEEeeecCCCCC----CcchhH
Q psy11597 199 E-------ELRSCVHYFHDNIQI---YPLWICPFLLKD-LPGLVHPAKAQD----GMYLDLGLYGEPKAK----DYHSKN 259 (317)
Q Consensus 199 ~-------~~~~~l~~i~~~~~~---~p~~l~p~k~~~-~~~~L~~p~~~~----~~~~d~~~y~~~~~~----~~~~~~ 259 (317)
+ +..++|++|++.+.. ...|..++|... ++.+|||...++ +++|.|.+|.+.. + ..-+.+
T Consensus 390 e~~~~~~~~~~~~l~el~~~i~~~~~~~~fPiEvR~ta~Dd~~LSpa~~r~~~~~s~~I~v~~y~~~~-~~~~~~~~~~~ 468 (541)
T TIGR01676 390 GTLAKPNMKDIEYIEELKQLIEKENIPAPAPIEQRWTACSKSPMSPASSSADDDIFSWVGIIMYLPTM-DARQRKEITEE 468 (541)
T ss_pred ccccccccchHHHHHHHHHHHHhcCCCCCCCeEEEeecCCCcccCCccCCCCCCceEEEEEEecCCCC-ChhhhhhhHHH
Confidence 9 669999999998853 345666888876 469999888888 6999999988531 1 012346
Q ss_pred HH---HHHHHHHHhc-CCeeccccCCCC-ChHH-------HHHhCCchHHHHHHHhcCCCCCCCcccc
Q psy11597 260 TI---TALESYLGKI-RGFQMLGAGVYQ-SYSE-------FRQNYDHSLYDRVRARLGCEKGFPVIYD 315 (317)
Q Consensus 260 ~~---~~le~~v~~~-GGr~yl~k~~~~-t~~~-------f~~~Yp~~~f~~~r~~~DP~~~f~~~~~ 315 (317)
++ +..|+++.+. ||||||+|.+.+ +++| |++.||.++|+++|+++||+|+|.|.|=
T Consensus 469 ~f~~~~~~e~i~~~~ygGRPHWgK~h~~~~~~~l~~~yprl~~~YP~d~F~~~R~~lDP~g~F~N~yL 536 (541)
T TIGR01676 469 FFHYRHLTQALLWDHFSAFEHWAKIEVPKDKDELAALQARLKKKFPVDASNKARKALDPNKILSNNKL 536 (541)
T ss_pred HHhhhHHHHHHHHHhcCCccCcceecCCCCHHHHHHHHHHHHhhCCHHHHHHHHHHhCCCCccccHHH
Confidence 77 6778888888 999999999999 9999 8888886789999999999999999873
No 5
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=100.00 E-value=1.5e-34 Score=286.90 Aligned_cols=307 Identities=13% Similarity=0.083 Sum_probs=191.9
Q ss_pred ceeccCCCCCCc--ccCcccccEEEEEEEecCc------cEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccEE
Q psy11597 2 IVLGQGLESSSH--KYGVFQNTCVSYELVLSDA------SLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKVR 73 (317)
Q Consensus 2 ~~~~~g~~~~~~--~~G~~~~~V~~~~vv~~~G------~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~~ 73 (317)
-++++|+||++. ++|+++++|++++||++|| ++++||+++|+|||||++||+|+|||||++|||++|.+...
T Consensus 136 GaiatGthGs~~~~~~G~l~d~V~~l~vV~a~G~a~G~~~v~~~s~~~~~dLf~a~rgslG~lGVVtevTL~~~P~~~~~ 215 (557)
T TIGR01677 136 GMMGTGAHGSSLWGKGSAVHDYVVGIRLVVPASAAEGFAKVRILSEGDTPNEFNAAKVSLGVLGVISQVTLALQPMFKRS 215 (557)
T ss_pred EhhhCCCCCccccccccchhheEEEEEEEeCCCcccCcceEEEeCCCCCHHHHHhhccCCCccEeeeEEEEEEEccccce
Confidence 346777788755 8899999999999999999 89999999999999999999999999999999999998762
Q ss_pred EEE--CCCCcccc-cccCCCCCCeEEEEEecCCCcceee--ccccc-ccccccceeEEec-e---eecccc----h---h
Q psy11597 74 ARL--GCEKGFPV-IYDKEEDRDLFHAIPWSYGTLGFLT--AVEIQ-IIPVKNIRILHHL-H---VPILDY----Y---H 136 (317)
Q Consensus 74 ~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~-~~~~~~~~~~~~~-~---~~~~~y----~---~ 136 (317)
..+ ...+.+.+ ........++.+..+++......+. +..+. ........++... . +.+..+ . .
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~~~~~~f~w~P~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (557)
T TIGR01677 216 VTYTMRDDSDFEDQFVTFGKKHEFADITWYPSQGKAVYRRDDRVPVNASGNGVNDFLGFRSTLIAAIAGIRALEETFERS 295 (557)
T ss_pred EEEEcCCHHHHHHHHHHhhcCCeEEEEEEECCCCeEEEEecCcCCCCCCcchhhhhccccccchhhhhhhhhhhHHHhhh
Confidence 233 33332332 2222234477777777776542211 11110 0000001110000 0 000000 0 0
Q ss_pred cccCCceeeeeeecccCCccee-hhhcc---ccCCchhhhhccc----cc--------------ccccccccCCC---ce
Q psy11597 137 RFSTSLFWEIQDIVPFGNHPLF-RYLLG---WLMPPKVALLKLT----QT--------------QTIKNLYDKHH---VV 191 (317)
Q Consensus 137 r~~~~~~w~~~~~~p~~~~~~~-r~~~~---~~~~~~~~~~~~~----~~--------------~~~~~~y~~~~---~~ 191 (317)
+++.+..+... ..|.. .++. ..+.. +.+. ...+..+. .+ ..+. ...+. +.
T Consensus 296 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~~g~s~~v~~~~~c~~~~~~~~~~~~~~~--~~~~~~~~f~ 370 (557)
T TIGR01677 296 RNANGKCVTAT-ITSAA-LFLPGYGLTNSGGIIFT-GYPVVGSQGRMQTSGSCLDSPQDGLLTACAWD--PRYKGLFFFH 370 (557)
T ss_pred cccccceeccc-cccch-hhhhccccccccccccc-CCceecchHhhcccccccccccccccccCccc--ccccccccee
Confidence 00000001110 00110 0000 00000 0000 00000000 00 0000 00011 55
Q ss_pred E-EEeechhcHHHHHHHHHhhccCC--------CeeeeeeeecC-CCCCCCCCCCCCCeeEEEeeecCCC-CCCcchhHH
Q psy11597 192 Q-DYLVPIEELRSCVHYFHDNIQIY--------PLWICPFLLKD-LPGLVHPAKAQDGMYLDLGLYGEPK-AKDYHSKNT 260 (317)
Q Consensus 192 q-d~~IP~~~~~~~l~~i~~~~~~~--------p~~l~p~k~~~-~~~~L~~p~~~~~~~~d~~~y~~~~-~~~~~~~~~ 260 (317)
| ||+||.+++.++|++|++.+... ..|...+|..+ ++.+||+ .+++++|+|.+|.... .......++
T Consensus 371 e~EyavP~e~~~~al~~vr~~~~~~~~~~~~~~~~fpievR~v~aDd~wLSp--~rds~~i~~~~~~~~~~~~~~~~~~~ 448 (557)
T TIGR01677 371 QTTLSVPVSRFRDFVLDVKRLRDMEPKSLCGVELYNGILIRYVKASPAYLGK--EEDAVDFDFTYYRAKDPLTPRLYEDV 448 (557)
T ss_pred EEEEEeeHHHHHHHHHHHHHHHHhcccccCceeeecCeEEEEecCCccccCC--CCceEEEEEEEecCCCCcccchHHHH
Confidence 5 99999999999999999877432 23445677766 4699997 8999999999988532 122246889
Q ss_pred HHHHHHH-HHhcCCeeccccCCCCChHHHHHhCCc-hHHHHHHHhcCCCCCCCcccc
Q psy11597 261 ITALESY-LGKIRGFQMLGAGVYQSYSEFRQNYDH-SLYDRVRARLGCEKGFPVIYD 315 (317)
Q Consensus 261 ~~~le~~-v~~~GGr~yl~k~~~~t~~~f~~~Yp~-~~f~~~r~~~DP~~~f~~~~~ 315 (317)
++++|++ ++++||||||+|.+.++++++++.||+ ++|.++|+++||+|+|+|.|-
T Consensus 449 f~~~E~i~l~~yggRPHWGK~h~~~~~~l~~~YP~~~dF~alR~~~DP~g~F~N~yl 505 (557)
T TIGR01677 449 IEEIEQMAFFKYGALPHWGKNRNLAFDGVIRKYPNADKFLKVKDSYDPKGLFSSEWS 505 (557)
T ss_pred HHHHHHHHHhhcCCCCCccccccchHHHHHHhCCCHHHHHHHHHhcCCCCccCCHHH
Confidence 9999998 999999999999999999999999997 899999999999999999874
No 6
>PLN02441 cytokinin dehydrogenase
Probab=100.00 E-value=1.4e-34 Score=284.03 Aligned_cols=298 Identities=15% Similarity=0.223 Sum_probs=194.1
Q ss_pred CceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccE----EEEE
Q psy11597 1 GIVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV----RARL 76 (317)
Q Consensus 1 G~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~----~~~~ 76 (317)
|.+.++|+|+++++||+++++|++++||++||++++||+++|+|||||++||+|+|||||++||+++|+++. ++.|
T Consensus 173 G~ist~G~gg~s~ryG~~~d~Vl~leVVtadGevv~~s~~~n~DLF~Av~GglG~fGIIT~atlrL~Pap~~v~~~~~~y 252 (525)
T PLN02441 173 GTLSNAGISGQAFRHGPQISNVLELDVVTGKGEVVTCSPTQNSDLFFAVLGGLGQFGIITRARIALEPAPKRVRWIRVLY 252 (525)
T ss_pred EEcCCCCccccccccCcHHHhEEEEEEEeCCceEEEeCCCCChhHHHhhccCCCCcEEEEEEEEEEEecCCceEEEEEEc
Confidence 445556899999999999999999999999999999999999999999999999999999999999999884 4556
Q ss_pred -CCCCcccccc---c--CCCCCCeEEEEEecCCCc---c----eeeccccc-cc--ccccceeEEeceeecccchhcccC
Q psy11597 77 -GCEKGFPVIY---D--KEEDRDLFHAIPWSYGTL---G----FLTAVEIQ-II--PVKNIRILHHLHVPILDYYHRFST 140 (317)
Q Consensus 77 -~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~---g----~~~~~~~~-~~--~~~~~~~~~~~~~~~~~y~~r~~~ 140 (317)
++++++++.. . ....+||+|++++.+..+ + .+....+. .. ......+|.++.. .|+..-+.
T Consensus 253 ~~~~~~~~d~~~li~~~~~~~~d~veg~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~le~~---~~~~~~~~ 329 (525)
T PLN02441 253 SDFSTFTRDQERLISRPPENSFDYVEGFVIVNRNGLINNWRSSFFSPSDPVRASSLPSDGGVLYCLEVA---KYYDEDTS 329 (525)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcceEeEEEEeCCCCceeeeecccCCccccchhhccccCCceEEEEEEE---EeeCCCCc
Confidence 7777555422 1 234699999999988432 1 11111000 00 0000112333221 11110000
Q ss_pred -----C--ceeeeeeecc---cCC-cceehhhccccCCchhhhhcccccccccccccCCCceEEEeechhcHHHHHHHHH
Q psy11597 141 -----S--LFWEIQDIVP---FGN-HPLFRYLLGWLMPPKVALLKLTQTQTIKNLYDKHHVVQDYLVPIEELRSCVHYFH 209 (317)
Q Consensus 141 -----~--~~w~~~~~~p---~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~qd~~IP~~~~~~~l~~i~ 209 (317)
. .+-..-.+.| |.. .++.. ++.+ .++... .. ++. -++..+|+|.+++||.+++++|.+.+.
T Consensus 330 ~~~~~~~~~ll~~L~~~~~~~~~~d~~y~~-fl~r-v~~~e~--~l-r~~---G~W~~phPWlnlfvp~s~i~~f~~~v~ 401 (525)
T PLN02441 330 DTVDQEVESLLKRLSFIPGLLFTTDVSYVD-FLDR-VHVEEL--KL-RSK---GLWEVPHPWLNLFVPKSRIADFDDGVF 401 (525)
T ss_pred cchhhHHHHHHhhcCCCCCCceecccCHHH-HHHh-hhhHHH--HH-hhc---CCcCCCCchhheeCcHHHHHHHHHHHH
Confidence 0 0000000000 000 00000 0000 000000 00 111 134567899999999999999999999
Q ss_pred hhcc----CCCeeeeeeeecCCCCCCCCCCCCCCeeEEEeeecC--CCCCCc-chhHHHHHHHHHHHhcCC--eeccccC
Q psy11597 210 DNIQ----IYPLWICPFLLKDLPGLVHPAKAQDGMYLDLGLYGE--PKAKDY-HSKNTITALESYLGKIRG--FQMLGAG 280 (317)
Q Consensus 210 ~~~~----~~p~~l~p~k~~~~~~~L~~p~~~~~~~~d~~~y~~--~~~~~~-~~~~~~~~le~~v~~~GG--r~yl~k~ 280 (317)
+.+. .+|+.++|+.+.+-+..+|...+..+.++-+++.+. |..+.+ +....|+++-+.+.++|+ ++|+...
T Consensus 402 ~~i~~~~~~G~~liyP~~~~~~~~~~s~~~P~~~~~y~v~~l~~~~p~~~~~~~~~~~n~~i~~~~~~~g~~~k~Yl~~~ 481 (525)
T PLN02441 402 KGILLDGTNGPILVYPLNRSKWDNRTSAVIPDEDIFYLVALLRSALPSGDDLEHLLAQNKEILRFCEKAGIGVKQYLPHY 481 (525)
T ss_pred hhcccccCCCeEEEEecccccCCCCCccccCCCCeEEEEEEcCCCCCCcccHHHHHHHHHHHHHHHHHcCCceEEcCCCC
Confidence 8773 279999999988755445444444555555666654 322222 458899999999999999 8888765
Q ss_pred CCCChHHHHHhCCc--hHHHHHHHhcCCCCCCC
Q psy11597 281 VYQSYSEFRQNYDH--SLYDRVRARLGCEKGFP 311 (317)
Q Consensus 281 ~~~t~~~f~~~Yp~--~~f~~~r~~~DP~~~f~ 311 (317)
+|.+||++||+. +.|.+.|++|||.+||.
T Consensus 482 --~~~~~W~~HfG~~w~~f~~~K~~yDP~~iL~ 512 (525)
T PLN02441 482 --TTQEEWKRHFGPKWETFVRRKAKFDPLAILS 512 (525)
T ss_pred --CCHHHHHHHhcchHHHHHHHHhhCCchhhcC
Confidence 899999999985 45999999999999885
No 7
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=100.00 E-value=6.4e-34 Score=281.27 Aligned_cols=305 Identities=11% Similarity=0.048 Sum_probs=197.6
Q ss_pred CceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccE-EEEE--C
Q psy11597 1 GIVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV-RARL--G 77 (317)
Q Consensus 1 G~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~-~~~~--~ 77 (317)
|-++++|+||++.++|.++++|++++||+++|++++||+++++|||+|+++|+|.+||||++|||++|.+++ +..+ +
T Consensus 195 GGaIstGtHGtG~~~g~i~d~V~~l~lVta~G~vv~~s~~~~pdLF~aar~glG~lGVIteVTLql~P~~~L~~~~~~~~ 274 (573)
T PLN02465 195 GGFIQVGAHGTGARIPPIDEQVVSMKLVTPAKGTIELSKEDDPELFRLARCGLGGLGVVAEVTLQCVPAHRLVEHTFVSN 274 (573)
T ss_pred cchhhCCCCCcCCCcCcHhheEEEEEEEECCCCEEEECCCCCHHHHhHhhccCCCCcEEEEEEEEEEecCceEEEEEEec
Confidence 345678999999999999999999999999999999999999999999999999999999999999999998 4444 7
Q ss_pred CCCcccccccCCCCCCeEEEEEecCCCcceee--cccc-cccccccc-eeEE---e--------ce-------------e
Q psy11597 78 CEKGFPVIYDKEEDRDLFHAIPWSYGTLGFLT--AVEI-QIIPVKNI-RILH---H--------LH-------------V 129 (317)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~-~~~~~~~~-~~~~---~--------~~-------------~ 129 (317)
+++.++.+.......++++.++++........ +..+ ...+.+.. .+.. + +. .
T Consensus 275 ~~~~~~~~~~~~~~~~h~~f~wfP~td~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 354 (573)
T PLN02465 275 RKEIKKNHKKWLSENKHIRYMWIPYTDTVVVVTCNPLSKWKEPPKIKPKYSEDERVQPLRDLYKESAGTKSSENPEPDIQ 354 (573)
T ss_pred HHHHHHHHHHHHHhCcccceeecCCcceEEEEeCCCCCCccCCcccccccchhhhhhhhhhhhhhhcccccccccccccc
Confidence 77655543211223455555577765542111 1110 00000000 0000 0 00 0
Q ss_pred ecccchhcccCCceeeeeeecccCCcceehhh--ccccCCchhhhhccccccccccccc----CCCceEEEeechh----
Q psy11597 130 PILDYYHRFSTSLFWEIQDIVPFGNHPLFRYL--LGWLMPPKVALLKLTQTQTIKNLYD----KHHVVQDYLVPIE---- 199 (317)
Q Consensus 130 ~~~~y~~r~~~~~~w~~~~~~p~~~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~y~----~~~~~qd~~IP~~---- 199 (317)
.+.....+.- ..|... ..|-. .+..... .+|...... ....++ +++. .+..+.||+||.+
T Consensus 355 ~l~~~~l~~~--~~~~~~-l~p~~-~~~vn~~~~~~~~~s~~~---~v~~S~---~if~~~~~~~q~~~EyaiP~~~~~~ 424 (573)
T PLN02465 355 EMGFGELRDK--LLALDP-LDPDH-VKRVNAAEAEFWRRSEGY---RVGWSD---EILGFDCGGQQWVSEVCFPAGTLAK 424 (573)
T ss_pred ccchHHHHHH--HhhcCc-cchhh-hHHHHHHHHHHhhcCCCc---EeCcHH---HhcCccccceeEEEEEEEecccccc
Confidence 0000000000 000000 00000 0111111 112211110 001111 2222 1223348999999
Q ss_pred ---cHHHHHHHHHhhccC---CCeeeeeeeecC-CCCCCCCCCC----CCCeeEEEeeecCCCC----C--CcchhHHH-
Q psy11597 200 ---ELRSCVHYFHDNIQI---YPLWICPFLLKD-LPGLVHPAKA----QDGMYLDLGLYGEPKA----K--DYHSKNTI- 261 (317)
Q Consensus 200 ---~~~~~l~~i~~~~~~---~p~~l~p~k~~~-~~~~L~~p~~----~~~~~~d~~~y~~~~~----~--~~~~~~~~- 261 (317)
+..++|++|++.|.. ...|..++|... ++.+|||... +.+++|.|.+|.+... + .....+++
T Consensus 425 ~~~~~~~~l~el~~~i~~~~~~~~fPiE~R~ta~dd~~LSpa~~~~~d~~s~~I~i~~Y~~~~~~~~~~~~~~~~~~yf~ 504 (573)
T PLN02465 425 PSMKDLEFMEELLALIEKEGIPAPAPIEQRWTASSSSPMSPASSPSPDDLHSWVGIIMYLPTEDERQRKEITEEFFHYRK 504 (573)
T ss_pred ccccHHHHHHHHHHHHHhcCCCCCCceEEEeecCCccccCcccCCCCCCceEEEEEEeccCCChhhhhhhhhHHHHHHHH
Confidence 666999999998853 334566888876 4699999877 6699999999985321 0 01235788
Q ss_pred HHHHHHHHhcCCeeccccCCC--------CChHHHHHhCCchHHHHHHHhcCCCCCCCcccc
Q psy11597 262 TALESYLGKIRGFQMLGAGVY--------QSYSEFRQNYDHSLYDRVRARLGCEKGFPVIYD 315 (317)
Q Consensus 262 ~~le~~v~~~GGr~yl~k~~~--------~t~~~f~~~Yp~~~f~~~r~~~DP~~~f~~~~~ 315 (317)
+.+|++++++|||+||+|.+. ++++++++.||-++|+++|+++||+|+|.|.|=
T Consensus 505 ~~~e~i~~~yggRPHWgK~h~~~~~~~~~~~~~~L~~~YP~d~F~~~R~~lDP~g~f~N~~L 566 (573)
T PLN02465 505 KTQRNLWDKYSAYEHWAKIEVPKDKEELEALRERLRKRFPVDAFNKARKELDPKGILSNNLL 566 (573)
T ss_pred HHHHHHHHHcCCCcccceeccccccchhhcCHHHHHhhCCHHHHHHHHHHhCCCCccCCHHH
Confidence 999999999999999999999 999999999997789999999999999999873
No 8
>KOG1231|consensus
Probab=99.90 E-value=6.2e-24 Score=199.18 Aligned_cols=288 Identities=14% Similarity=0.202 Sum_probs=177.1
Q ss_pred CceeccCCCCCCcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccE-E-EEECC
Q psy11597 1 GIVLGQGLESSSHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV-R-ARLGC 78 (317)
Q Consensus 1 G~~~~~g~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~-~-~~~~~ 78 (317)
|.++.+|+|++.+|||.+.+||++|+||+++|++++||+..|++||.++.||+|+|||||++||+|.|+|+. + ..-+.
T Consensus 170 GtlsnagiggqafRyGpqi~NV~~LdVVtgkGeiv~cs~r~n~~lf~~vlGglGqfGIITrArI~le~aP~~dQe~lis~ 249 (505)
T KOG1231|consen 170 GTLSNAGIGGQAFRYGPQISNVIELDVVTGKGEIVTCSKRANSNLFFLVLGGLGQFGIITRARIKLEPAPKRDQERLISV 249 (505)
T ss_pred ceeccCccccceeeccchhhceEEEEEEcCCCcEEecccccCceeeeeeeccCcceeeEEEEEEEeccCCccchHHhhhh
Confidence 556678899999999999999999999999999999999999999999999999999999999999999965 1 00011
Q ss_pred CCcccccccCCCCCCeEEEEEecCCCc---c-eeecccccccccccce-------eEEeceeecccchhcccCC-ceeee
Q psy11597 79 EKGFPVIYDKEEDRDLFHAIPWSYGTL---G-FLTAVEIQIIPVKNIR-------ILHHLHVPILDYYHRFSTS-LFWEI 146 (317)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~r~~~~-~~w~~ 146 (317)
..++||+++.+.-...+ + +.+.-++.. +.++.. .+.++. ..||..-..- .+.
T Consensus 250 ----------~~~fd~veg~~~~~~~gl~~n~r~s~f~l~D-~~~i~~~~~~~~~~yclev---~ky~d~~e~pti~~-- 313 (505)
T KOG1231|consen 250 ----------CGSFDTVEGAAIVARNGLQSNIRVSRFELLD-EVQIAAINSDHSTNYCLEV---AKYYDLTEAPTLFQ-- 313 (505)
T ss_pred ----------hcCCcchhhhhhhhhccccccceeeccccCc-HHHHHHHHhcCCeeeeeeh---hhccCcccCchHHH--
Confidence 11455555444333111 1 011000000 001100 011111 1121111000 000
Q ss_pred eeecccCCcceehhhc---cccCCchhhhhccccc-----cccc--ccccCCCceEEEeechhcHHHHHHHHHhhc----
Q psy11597 147 QDIVPFGNHPLFRYLL---GWLMPPKVALLKLTQT-----QTIK--NLYDKHHVVQDYLVPIEELRSCVHYFHDNI---- 212 (317)
Q Consensus 147 ~~~~p~~~~~~~r~~~---~~~~~~~~~~~~~~~~-----~~~~--~~y~~~~~~qd~~IP~~~~~~~l~~i~~~~---- 212 (317)
-++ .....+- .-.+-....+.+.+.+ .+.+ .++.-+|+|-.+++|-++..+|-+.+...+
T Consensus 314 ----e~~--~l~~~l~~~~~~~~~~~v~y~~fldrv~~ae~klrskgLWevphpWlnL~vpks~i~~fa~gv~~dIl~~~ 387 (505)
T KOG1231|consen 314 ----EIG--GLSEKLNYAPTFIVEQDVQYHDFLDRVHFAEDKLRSKGLWEVPHPWLNLAVPKSRISDFARGVFTDILVPN 387 (505)
T ss_pred ----HHh--ccchhhhccchhhhhhhhHHHHhhhHhhhcccchhhcccccCCCchheeecccccchhhhhhhccceeecc
Confidence 000 0000000 0000000011111110 0111 245566788899999999988888886544
Q ss_pred cCCCeeeeeeeec-CCCCCCCC--CCCCCCeeEEEeeecCCCCC-CcchhHHHHHHHHHHHhcCCeeccccCCCCChHHH
Q psy11597 213 QIYPLWICPFLLK-DLPGLVHP--AKAQDGMYLDLGLYGEPKAK-DYHSKNTITALESYLGKIRGFQMLGAGVYQSYSEF 288 (317)
Q Consensus 213 ~~~p~~l~p~k~~-~~~~~L~~--p~~~~~~~~d~~~y~~~~~~-~~~~~~~~~~le~~v~~~GGr~yl~k~~~~t~~~f 288 (317)
..+|..++|.+.. +-...++- |-.+++.+.-++++++...+ ......+|+++-+.+.++|=..--+--++-+.|+|
T Consensus 388 s~g~~liyptnk~~kw~~~~sav~ph~~e~vFy~v~~l~s~~~~~~e~~~~~n~riv~fc~~ag~~~keyl~~~~~~e~w 467 (505)
T KOG1231|consen 388 SSGPVLIYPTNKDLKWSNRLSAVTPHAGEGVFYLVILLRSSGKEEHEELEQLNDRIVKFCLAAGTCTKEYLPHYGKREYW 467 (505)
T ss_pred CCCceEEeccccCcchhhhhccccccCCCceEEEEEEecCCCchhHHHHHHHHHHHHHHHHHcCcChhhhcCCcccHHHH
Confidence 3589999999876 32333442 55577777778888863222 22457799999999999966655555666799999
Q ss_pred HHhCCc--hHHHHHHHhcCCCCCC
Q psy11597 289 RQNYDH--SLYDRVRARLGCEKGF 310 (317)
Q Consensus 289 ~~~Yp~--~~f~~~r~~~DP~~~f 310 (317)
.++++. .+|.+.|..|||+.++
T Consensus 468 ~~hfG~~w~~f~~~K~~~DPk~Il 491 (505)
T KOG1231|consen 468 VEHFGEKWVDFMRIKKAYDPKRIL 491 (505)
T ss_pred HHHhChhHHHHHHHHhhcCHHHhc
Confidence 999985 4699999999999765
No 9
>KOG4730|consensus
Probab=99.88 E-value=1.8e-21 Score=182.85 Aligned_cols=307 Identities=16% Similarity=0.169 Sum_probs=183.2
Q ss_pred CceeccCCCCCCcc-cCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecccEEEEE---
Q psy11597 1 GIVLGQGLESSSHK-YGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKVRARL--- 76 (317)
Q Consensus 1 G~~~~~g~~~~~~~-~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~~~~~--- 76 (317)
|-+|++|.||++.+ ++......+.+.++.++|.++++|++.+||+|.|++.|+|.+|||.++||+++|.+++..+|
T Consensus 148 gGii~TGaHGSS~~vH~~v~~i~~v~~~~~~~G~v~~Ls~e~dpe~F~AAkvSLG~LGVIs~VTl~~vp~Fk~s~t~~v~ 227 (518)
T KOG4730|consen 148 GGIISTGAHGSSLWVHDYVSEIISVSPITPADGFVVVLSEEKDPELFNAAKVSLGVLGVISQVTLSVVPAFKRSLTYVVT 227 (518)
T ss_pred eeEEecccCCCccccCcccceeEEEeeeccCCceEEEecccCCHHHHhhhhhcccceeEEEEEEEEEEecceeeeEEEEe
Confidence 56899999999998 78887778888888899999999999999999999999999999999999999999983333
Q ss_pred CCCCcccccc-cCCCCCCeEEEEEecCCCcc--eeecc-cccc-----cccccc--ee------EE-------------e
Q psy11597 77 GCEKGFPVIY-DKEEDRDLFHAIPWSYGTLG--FLTAV-EIQI-----IPVKNI--RI------LH-------------H 126 (317)
Q Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g--~~~~~-~~~~-----~~~~~~--~~------~~-------------~ 126 (317)
+..+.|.+.. ....+.+|+|.++++..... +..+. +... .|.+.+ .+ +. +
T Consensus 228 n~~dl~~d~~~~~~~~~EF~~~~w~Py~~kvV~~~~nrv~~ntg~~~f~p~~~~~s~~~~~~~s~~e~~~~~r~~~~kc~ 307 (518)
T KOG4730|consen 228 NDSDLFKDWKVTLGESHEFVDVLWYPYTGKVVYRRDNRVPVNTGLPDFKPFRPQPSAVLAKLRSFEESIELFRDANGKCV 307 (518)
T ss_pred chHHHHHHHHHHhcccccceEEEEeccCCeEEEEecCccccccCCccccCCCCcHHHHHHHHHHHHHHHHHhhhccCcee
Confidence 5555566543 34567789998888876552 11111 1110 000000 00 00 0
Q ss_pred ceeecccchhcccCCceeeeeeecccCCcceehhhccccCCchhhhhccccc----ccccccccCCCceE-EEeechhcH
Q psy11597 127 LHVPILDYYHRFSTSLFWEIQDIVPFGNHPLFRYLLGWLMPPKVALLKLTQT----QTIKNLYDKHHVVQ-DYLVPIEEL 201 (317)
Q Consensus 127 ~~~~~~~y~~r~~~~~~w~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~y~~~~~~q-d~~IP~~~~ 201 (317)
...++..|+++..-.....+.-+.- .|.... -+..+-. ...+ +.+. -+|-.-+....+.| -.-||++++
T Consensus 308 ~a~~~tp~l~~~sf~~~~~~~~~t~---~pvig~-q~~~~~s-~sCl-~s~~~g~~~~W~~ri~g~f~~qt~~s~pl~~~ 381 (518)
T KOG4730|consen 308 SADSVTPYLERFSFGLTNGGKLFTG---YPVIGV-QGKMMSS-GSCL-DSQSDGTACEWDPRIKGFFFHQTTFSIPLTAV 381 (518)
T ss_pred cCcccchhHHHhhhheecCcEeeec---CcccCc-cchhccc-hhhh-hhccCccccCCCccccCchhheeeeccchhhh
Confidence 0101112222211000000000000 000000 0000000 0000 0011 11111111112233 355899999
Q ss_pred HHHHHHHHhhccC--------CCeeeeeeeecCCCCCCCCCCCCCCeeEEEeeecC----CCCCCcchhHHHHHHHHHHH
Q psy11597 202 RSCVHYFHDNIQI--------YPLWICPFLLKDLPGLVHPAKAQDGMYLDLGLYGE----PKAKDYHSKNTITALESYLG 269 (317)
Q Consensus 202 ~~~l~~i~~~~~~--------~p~~l~p~k~~~~~~~L~~p~~~~~~~~d~~~y~~----~~~~~~~~~~~~~~le~~v~ 269 (317)
.+|+..+.+...+ .-.+..++|... +++-+.......+-+|+..|+. |..+......++++||+++.
T Consensus 382 ~~ai~dik~l~~ie~~~~c~~~~~~pi~iR~~t-~sPayl~~t~~~~~fd~~Y~~a~dyrp~~~~l~e~~~~e~lEq~al 460 (518)
T KOG4730|consen 382 KDAINDIKDLVKIEPKSLCGLETYNPILIRYVT-SSPAYLGKTSEDCDFDTTYYRAKDYRPLTPRLYEDFYFEELEQIAL 460 (518)
T ss_pred hhHhhhhhhhcccChhhhhhhhhccceeEEEec-CCchhhccCcccceeeeeeeeccCCCcCCCCcchhHHHHHHHHHHH
Confidence 9999999764421 112333455443 2222234455666677655442 22232222349999999999
Q ss_pred -hcCCeeccccCCCCChHHHHHhCCc-hHHHHHHHhcCCCCCCCccc
Q psy11597 270 -KIRGFQMLGAGVYQSYSEFRQNYDH-SLYDRVRARLGCEKGFPVIY 314 (317)
Q Consensus 270 -~~GGr~yl~k~~~~t~~~f~~~Yp~-~~f~~~r~~~DP~~~f~~~~ 314 (317)
++||.|||+|---+.-+..-+-|+. +.|.++|+++||+++|.|.|
T Consensus 461 ~kyna~PHWaKn~~lafe~vi~ky~n~~~flkvr~~lDP~~lFssew 507 (518)
T KOG4730|consen 461 FKYNAKPHWAKNRNLAFEGVIRKYKNLDKFLKVRKELDPKGLFSSEW 507 (518)
T ss_pred HHhcCCcchhhhhhhhHHHHHHhccChHHHHHHHHhcCccchhhhhh
Confidence 9999999999887888888888965 89999999999999999876
No 10
>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1.1.3.37 from EC, which is involved in the final step of the D-erythroascorbic acid biosynthesis pathway [].; GO: 0003885 D-arabinono-1,4-lactone oxidase activity, 0055114 oxidation-reduction process, 0016020 membrane; PDB: 2VFU_A 2VFV_A 2VFT_A 2VFS_A 2VFR_A.
Probab=99.87 E-value=2.2e-22 Score=183.61 Aligned_cols=128 Identities=18% Similarity=0.205 Sum_probs=91.4
Q ss_pred CCceEEEeechhcHHHHHHHHHhhccC----CCeeeeeeeecC-CCCCCCCCCCCCCeeEEEeeecCCCCCCcchhHHHH
Q psy11597 188 HHVVQDYLVPIEELRSCVHYFHDNIQI----YPLWICPFLLKD-LPGLVHPAKAQDGMYLDLGLYGEPKAKDYHSKNTIT 262 (317)
Q Consensus 188 ~~~~qd~~IP~~~~~~~l~~i~~~~~~----~p~~l~p~k~~~-~~~~L~~p~~~~~~~~d~~~y~~~~~~~~~~~~~~~ 262 (317)
+...+||+||.+++.++|+++.+.+.. ...+...+|..+ ++.+||+...+++|++++.+|.+...+. ...++++
T Consensus 124 ~~~~~E~~iP~~~~~~~l~~l~~~~~~~~~~~~~~pie~R~~~~d~~~Ls~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~ 202 (259)
T PF04030_consen 124 RFWEMEYAIPIENAPEALRELRALIDKEGGFPVHFPIEVRFVKADDAWLSPAYGRDTCYIEIHMYRPMGDPV-PYEEFFR 202 (259)
T ss_dssp ---EEEEEEEGGGHHHHHHHHHHTHHHHG--GGEEEEEEEEE--B-STT-TTBTS-EEEEEEEE-S-HH----HHHHHHH
T ss_pred cceeEEEeeCHHHHHHHHHHHHHHHHHcccCceeEEEEEEEECCChhhcCCCCCCCEEEEEEEEeCCccccc-cHHHHHH
Confidence 344569999999999999999988842 234556788776 4689999999999999999988643222 3789999
Q ss_pred HHHHHHHhcCCeeccccCCCCChHHHHHhCCc-hHHHHHHHhcCCCCCCCccccc
Q psy11597 263 ALESYLGKIRGFQMLGAGVYQSYSEFRQNYDH-SLYDRVRARLGCEKGFPVIYDK 316 (317)
Q Consensus 263 ~le~~v~~~GGr~yl~k~~~~t~~~f~~~Yp~-~~f~~~r~~~DP~~~f~~~~~k 316 (317)
++|+++.++||||||+|...+++++++++||. ++|.++|+++||+|+|.|.|-+
T Consensus 203 ~~e~~~~~~ggRpHWgK~~~~~~~~l~~~Yp~~~~F~~~r~~~DP~g~F~n~~~~ 257 (259)
T PF04030_consen 203 AFEQILRKYGGRPHWGKNHTLTAEQLRKLYPRLDDFLAVRKKLDPQGVFLNDYLR 257 (259)
T ss_dssp HHHHHHGGGT-EE-TTS-----HHHHHHT-TTHHHHHHHHHHH-TT-TT--HHHH
T ss_pred HHHHHHHHcCCEECcCcCCCCCHHHHHHHCcCHHHHHHHHHHhCCCCCCCCHhhh
Confidence 99999999999999999999999999999997 8999999999999999998854
No 11
>PLN00107 FAD-dependent oxidoreductase; Provisional
Probab=99.79 E-value=4.5e-19 Score=157.73 Aligned_cols=125 Identities=15% Similarity=0.212 Sum_probs=104.3
Q ss_pred CceE-EEeechhcHHHHHHHHHhhccCCC--------eeeeeeeecC-CCCCCCCCCCCCCeeEEEeeecCCCCC--Ccc
Q psy11597 189 HVVQ-DYLVPIEELRSCVHYFHDNIQIYP--------LWICPFLLKD-LPGLVHPAKAQDGMYLDLGLYGEPKAK--DYH 256 (317)
Q Consensus 189 ~~~q-d~~IP~~~~~~~l~~i~~~~~~~p--------~~l~p~k~~~-~~~~L~~p~~~~~~~~d~~~y~~~~~~--~~~ 256 (317)
.|.| ||+||++++.++|++|.+.+...| .|...+|..+ ++.|||+ .+++++|+|..|.....+ +..
T Consensus 61 ~F~E~EyaVP~e~~~~aL~elr~l~~~~~~~l~~~ev~fPIevR~vaADdawLSp--~rDSv~I~~~~yr~~~~~~~pr~ 138 (257)
T PLN00107 61 FFFQSAISVPLSGAAAFINDIKALRDIEPDALCGLELNYGVLLRYVRASPAHLGK--EEDALDFDLTYYRSKDDPAAPRL 138 (257)
T ss_pred ceEEEEEEecHHHHHHHHHHHHHHHHhCcccccccccccCeEEEEecCcchhhCC--CCCeEEEEEEEecccCCcccccc
Confidence 3556 999999999999999998775332 2344677776 4699997 499999999998843111 114
Q ss_pred hhHHHHHHHHH-HHhcCCeeccccCCCCChHHHHHhCCc-hHHHHHHHhcCCCCCCCcccc
Q psy11597 257 SKNTITALESY-LGKIRGFQMLGAGVYQSYSEFRQNYDH-SLYDRVRARLGCEKGFPVIYD 315 (317)
Q Consensus 257 ~~~~~~~le~~-v~~~GGr~yl~k~~~~t~~~f~~~Yp~-~~f~~~r~~~DP~~~f~~~~~ 315 (317)
..++++++|++ ++++||||||+|.+.++.+++.+.||+ ++|.++|+++||+|+|.|.|-
T Consensus 139 ~~~~f~eiEqial~kygGRPHWGK~h~l~~~~l~~lYPr~~dFlavR~~lDP~G~F~N~yl 199 (257)
T PLN00107 139 HEDAMEEIEQMAILKYGALPHWGKNRNAAFDGAIAKYKKAGEFLKVKERLDPEGLFSSEWS 199 (257)
T ss_pred HHHHHHHHHHHHHHhcCCcCCchhccCCCHHHHHHHCcCHHHHHHHHHHhCCCCccCCHHH
Confidence 68899999998 999999999999999999999999998 899999999999999999874
No 12
>PLN02805 D-lactate dehydrogenase [cytochrome]
Probab=99.68 E-value=2e-16 Score=157.95 Aligned_cols=269 Identities=15% Similarity=0.164 Sum_probs=145.2
Q ss_pred CCCCCcccCcccccEEEEEEEecCccEEEEcCC-----CCcchhhhcccCCCCcEEEEEEEEEEEecccE----EEEE-C
Q psy11597 8 LESSSHKYGVFQNTCVSYELVLSDASLVECSEE-----EDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV----RARL-G 77 (317)
Q Consensus 8 ~~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~-----~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~----~~~~-~ 77 (317)
.|..+.+||.++|+|++++||++||++++++.. .++||||+++||.|+|||||++||++.|.++. .+.| +
T Consensus 241 ~G~~s~~yG~~~d~V~~levVl~dG~iv~~~~~~~k~~~g~dL~~l~~GseGtLGIIT~~tlrl~p~P~~~~~~~~~f~~ 320 (555)
T PLN02805 241 SGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLVIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPT 320 (555)
T ss_pred cccccCccccHHHhEEEEEEEcCCceEEEecCccccCCCCccHHHHhccCCCceEEEEEEEEEeecCCcceEEEEEEcCC
Confidence 334489999999999999999999999988532 35899999999999999999999999999885 2344 5
Q ss_pred CCCcccc---ccc---CCCCCCeEEEEEecCCCcceeecccccccccccceeEEeceeec-----------ccchhcccC
Q psy11597 78 CEKGFPV---IYD---KEEDRDLFHAIPWSYGTLGFLTAVEIQIIPVKNIRILHHLHVPI-----------LDYYHRFST 140 (317)
Q Consensus 78 ~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~y~~r~~~ 140 (317)
++++++. ... ....++++|......- ........ |.. ..+.++.... .+-+.+...
T Consensus 321 ~~~a~~av~~i~~~g~~psa~ElmD~~~~~~~--~~~~~~~~---p~~--~~Ll~e~~g~~~~~~~~~~~~~~i~~~~g~ 393 (555)
T PLN02805 321 IKDAADVAIATMLSGIQVSRVELLDEVQIRAI--NMANGKNL---PEA--PTLMFEFIGTEAYAREQTLIVQKIASKHNG 393 (555)
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEECHHHHHHH--HHhcCCCC---Ccc--eEEEEEEecCcHHHHHHHHHHHHHHHhCCC
Confidence 6553332 111 1122344433211100 00000000 000 0000000000 000001100
Q ss_pred CceeeeeeecccCCcceehhhccccCCchhhhhcccccccccccc-cCCCceEEEeechhcHHHHHHHHHhhccCCCeee
Q psy11597 141 SLFWEIQDIVPFGNHPLFRYLLGWLMPPKVALLKLTQTQTIKNLY-DKHHVVQDYLVPIEELRSCVHYFHDNIQIYPLWI 219 (317)
Q Consensus 141 ~~~w~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~~~qd~~IP~~~~~~~l~~i~~~~~~~p~~l 219 (317)
..++..+ .+--+.. .|... +..... ..+.- ....++.|++||.++..++++++.+.+..+..-.
T Consensus 394 ~~~~~a~-------~~~e~~~-lW~~R-~~~~~~------~~~~~~~~~~~~~DvaVP~s~L~e~i~~~~~~~~~~~~~~ 458 (555)
T PLN02805 394 SDFVFAE-------EPEAKKE-LWKIR-KEALWA------CFAMEPKYEAMITDVCVPLSHLAELISRSKKELDASPLVC 458 (555)
T ss_pred ceEEEeC-------CHHHHHH-HHHHH-HHHHHH------HhhcCCCCceeEEEEEEEHHHHHHHHHHHHHHHHHcCCeE
Confidence 0011110 0000000 01110 000000 00000 1112566999999999999999999887665433
Q ss_pred eeeeecCCCCCCCCCCCCCCeeEEEeeecCCCCC--CcchhHHHHHHHHHHHhcCCeec-cccCCCCChHHHHHhCCc--
Q psy11597 220 CPFLLKDLPGLVHPAKAQDGMYLDLGLYGEPKAK--DYHSKNTITALESYLGKIRGFQM-LGAGVYQSYSEFRQNYDH-- 294 (317)
Q Consensus 220 ~p~k~~~~~~~L~~p~~~~~~~~d~~~y~~~~~~--~~~~~~~~~~le~~v~~~GGr~y-l~k~~~~t~~~f~~~Yp~-- 294 (317)
+.+-.. .+|-++ +++ ++. +..+ ..+...+.+++.+.+.++||... --..-....+-+.+.|+.
T Consensus 459 ~~~gHa-GdGnlH---------~~i-~~~-~~~~~~~~~~~~~~~~i~~~~~~~gGsiSgEHGiG~~k~~~l~~~~g~~~ 526 (555)
T PLN02805 459 TVIAHA-GDGNFH---------TII-LFD-PSQEDQRREAERLNHFMVHTALSMEGTCTGEHGVGTGKMKYLEKELGIEA 526 (555)
T ss_pred EEEEEc-CCCcEE---------EEe-ccC-CCCHHHHHHHHHHHHHHHHHHHHcCCeEeEECCCChhHHHHHHHhcCHHH
Confidence 333222 234433 333 221 1111 11246678889999999999762 233333556666788874
Q ss_pred -hHHHHHHHhcCCCCCC
Q psy11597 295 -SLYDRVRARLGCEKGF 310 (317)
Q Consensus 295 -~~f~~~r~~~DP~~~f 310 (317)
+.++++|+-+||+++|
T Consensus 527 ~~lm~~IK~a~DP~gIL 543 (555)
T PLN02805 527 LQTMKRIKKALDPNNIM 543 (555)
T ss_pred HHHHHHHHHHhCcCcCC
Confidence 3599999999999986
No 13
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion]
Probab=99.66 E-value=2.4e-16 Score=154.60 Aligned_cols=281 Identities=14% Similarity=0.119 Sum_probs=153.7
Q ss_pred eeccCCCC-CCcccCcccccEEEEEEEecCccEEEEcCC-----CCcchhhhcccCCCCcEEEEEEEEEEEecccE-E--
Q psy11597 3 VLGQGLES-SSHKYGVFQNTCVSYELVLSDASLVECSEE-----EDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV-R-- 73 (317)
Q Consensus 3 ~~~~g~~~-~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~-----~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~-~-- 73 (317)
.++++.|| .+.+||.++|+|+++++|++||++++|++. +..||++++.||+|+|||||++|+++.|.++. .
T Consensus 134 ~ia~~~~G~~~~~yG~~~d~v~~l~vV~~dG~i~~~~~~~~k~~~g~dl~~l~iGs~GtlGiit~~tl~l~p~~~~~~~~ 213 (459)
T COG0277 134 NIATNAGGLRSLRYGLTRDNVLGLRVVLPDGEILRLGRKLRKDNAGYDLTALFVGSEGTLGIITEATLKLLPLPETKATA 213 (459)
T ss_pred chhcCCCCccceecccHHHheeEEEEEcCCceehhhcCcccCCCCCCCHHHhcccCCccceEEEEEEEEeccCCchheEE
Confidence 34555555 799999999999999999999999999874 33799999999999999999999999998876 2
Q ss_pred EEE--CCCCccccc--cc--------CCCCCCeEEEEEecCCCc--ceeec-cccccccccccee-EEeceee---c---
Q psy11597 74 ARL--GCEKGFPVI--YD--------KEEDRDLFHAIPWSYGTL--GFLTA-VEIQIIPVKNIRI-LHHLHVP---I--- 131 (317)
Q Consensus 74 ~~~--~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~-~~~~~~~---~--- 131 (317)
+.+ +.+.+.... .. .....++++.- ... ..... ..+. ... ... ...+-.. +
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~ 286 (459)
T COG0277 214 VAGFPSIEAAARLAVAAIALLEALGVIPAALEFMDRP----IKAAEAYLGGGALPL--EAP-ARLLVEVEGSDEAAVDEA 286 (459)
T ss_pred EEeCCCHHHHHHHHHHHHHhhhhcCCCceeeeecchh----HHHHHHhccccCCCC--CCc-eEEEEEEcCCcHHHHHHH
Confidence 222 222222110 00 01111222111 000 00000 0000 000 000 0000000 0
Q ss_pred ----ccchhcccCCceeeeeeecccCCcceehhhccccCCchhhhhcccccccccccccCCCceEEEeechhcHHHHHHH
Q psy11597 132 ----LDYYHRFSTSLFWEIQDIVPFGNHPLFRYLLGWLMPPKVALLKLTQTQTIKNLYDKHHVVQDYLVPIEELRSCVHY 207 (317)
Q Consensus 132 ----~~y~~r~~~~~~w~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~qd~~IP~~~~~~~l~~ 207 (317)
.+.+.... ..+... +.... .. ....|... ..... +...+.......|+.+|.++..+++++
T Consensus 287 ~~~~~~~~~~~~--~~~~~~-~~~~~-~~---~~~~~~~r--~~~~~------~~~~~~~~~~~~d~~vp~~~~~~~~~~ 351 (459)
T COG0277 287 LEALGELLLEHG--LARDLV-VAQDL-AE---AARLWLAR--KGALA------AAGALGPGVIQEDVVVPLEALPEFLRE 351 (459)
T ss_pred HHHHHHHHHhcC--CceeEE-EeCCH-HH---HHHHHHHH--HHHHH------HHHhhCCCccccceeeeHHHHHHHHHH
Confidence 00000000 000000 00000 00 00011110 00001 001122223344999999999999999
Q ss_pred HHhhccCCCe-eeeeeeecCCCCCCCCCCCCCCeeEEEeeecC-CCCCCcchhHHHHHHHHHHHhcCCeeccccCCCCCh
Q psy11597 208 FHDNIQIYPL-WICPFLLKDLPGLVHPAKAQDGMYLDLGLYGE-PKAKDYHSKNTITALESYLGKIRGFQMLGAGVYQSY 285 (317)
Q Consensus 208 i~~~~~~~p~-~l~p~k~~~~~~~L~~p~~~~~~~~d~~~y~~-~~~~~~~~~~~~~~le~~v~~~GGr~yl~k~~~~t~ 285 (317)
+.+.+..... ..+.+.....+|. +.+++..... ...........++.+++++.++||+.++.+...++.
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~dg~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~gG~~~~~h~~g~~~ 422 (459)
T COG0277 352 ILALLDKAGLALRVALFGHAGDGN---------LHLNILYDVGDEAEELARAEALNEAIEALAVELGGSISGEHGIGRTK 422 (459)
T ss_pred HHHHHHhcCCCceeeeecccCCCc---------ceeeeccCCCccHHHHHHHHHHHHHHHHHHHHhCCeeEEecccchhh
Confidence 9998865331 1111111112222 3444422111 001111246788899999999999999999999999
Q ss_pred HHHHHhCCc---hHHHHHHHhcCCCCCCCccc
Q psy11597 286 SEFRQNYDH---SLYDRVRARLGCEKGFPVIY 314 (317)
Q Consensus 286 ~~f~~~Yp~---~~f~~~r~~~DP~~~f~~~~ 314 (317)
.+|...|+. ..++++|+.|||+++|.+-+
T Consensus 423 ~~~~~~~~~~~~~~~~~~k~~~DP~~i~npg~ 454 (459)
T COG0277 423 AEFLELEPGEAWALLRAIKRAFDPNGIFNPGK 454 (459)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCc
Confidence 999999984 46999999999999998754
No 14
>PRK11230 glycolate oxidase subunit GlcD; Provisional
Probab=99.59 E-value=2.1e-15 Score=149.35 Aligned_cols=64 Identities=25% Similarity=0.373 Sum_probs=58.6
Q ss_pred CCCCcccCcccccEEEEEEEecCccEEEEcCC----CCcchhhhcccCCCCcEEEEEEEEEEEecccE
Q psy11597 9 ESSSHKYGVFQNTCVSYELVLSDASLVECSEE----EDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV 72 (317)
Q Consensus 9 ~~~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~----~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~ 72 (317)
|..+.+||...++|++++||++||++++++.. .++||+|+++||+|++||||++||++.|.++.
T Consensus 166 G~~~~~yG~~~d~v~~levVl~~G~i~~~~~~~~~~~g~dl~~l~~Gs~GtlGIIt~atlkl~p~p~~ 233 (499)
T PRK11230 166 GVHCLKYGLTVHNLLKVEILTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVVTEVTVKLLPKPPV 233 (499)
T ss_pred CccceeeCChhhheeEEEEEcCCCcEEEeCCccCCCCccchHhhhccCCCccEEEEEEEEEEEcCCcc
Confidence 33567899999999999999999999999853 47899999999999999999999999999986
No 15
>TIGR00387 glcD glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.
Probab=99.52 E-value=4.2e-14 Score=137.41 Aligned_cols=72 Identities=26% Similarity=0.364 Sum_probs=61.5
Q ss_pred CCcccCcccccEEEEEEEecCccEEEEcCC-----CCcchhhhcccCCCCcEEEEEEEEEEEecccE----EEEE-CCCC
Q psy11597 11 SSHKYGVFQNTCVSYELVLSDASLVECSEE-----EDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV----RARL-GCEK 80 (317)
Q Consensus 11 ~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~-----~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~----~~~~-~~~~ 80 (317)
.+.+||..+|+|++++||++||++++++.. ..+||+++++||.|+|||||++||++.|.++. ...| ++++
T Consensus 110 ~~~~yG~~~d~v~~l~vV~~~G~~~~~~~~~~~~~~g~dl~~l~~Gs~GtlGiit~~~lkl~p~p~~~~~~~~~f~~~~~ 189 (413)
T TIGR00387 110 RGLKYGTTVDYVLGLEVVTADGEILRIGGKTAKDVAGYDLTGLFVGSEGTLGIVTEATLKLLPKPENIVVALAFFDSIEK 189 (413)
T ss_pred cceeeccHHhheeeEEEEeCCCCEEEeCCcccCCCCCCChhhhcccCCccceEEEEEEEEeecCCCccEEEEEECCCHHH
Confidence 567999999999999999999999999752 35799999999999999999999999999886 2333 5555
Q ss_pred cc
Q psy11597 81 GF 82 (317)
Q Consensus 81 ~~ 82 (317)
++
T Consensus 190 ~~ 191 (413)
T TIGR00387 190 AM 191 (413)
T ss_pred HH
Confidence 33
No 16
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=99.42 E-value=2.1e-13 Score=129.13 Aligned_cols=69 Identities=20% Similarity=0.335 Sum_probs=60.5
Q ss_pred eccCCCC-CCcccCcccccEEEEEEEecCccEEEEcCC-----CCcchhhhcccCCCCcEEEEEEEEEEEecccE
Q psy11597 4 LGQGLES-SSHKYGVFQNTCVSYELVLSDASLVECSEE-----EDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV 72 (317)
Q Consensus 4 ~~~g~~~-~~~~~G~~~~~V~~~~vv~~~G~~~~~s~~-----~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~ 72 (317)
+++|.+| .+.+||..+|+|+++++|++||++++|+.. .++||||+++||+|+|||||++|||+.|.++.
T Consensus 98 iatg~~G~~~~~yG~~~D~Vlg~~vV~~~Gei~~~gg~v~kn~~G~DL~~l~~Gs~GtLGVitevtlkl~P~p~~ 172 (352)
T PRK11282 98 VAAGLSGPRRPWAGAVRDFVLGTRLINGRGEHLRFGGQVMKNVAGYDVSRLMAGSLGTLGVLLEVSLKVLPRPRA 172 (352)
T ss_pred HhcCCCCccccccCCHHHhEeeEEEEcCCceEEEeCCcccCCCCCchHHHHHhhCCchhhhheEEEEEEEecCce
Confidence 3444455 467799999999999999999999999753 35899999999999999999999999999886
No 17
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. It is predominantly found in plant cytokinin dehydrogenase 1, where it is capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin []. ; GO: 0019139 cytokinin dehydrogenase activity, 0050660 flavin adenine dinucleotide binding, 0009690 cytokinin metabolic process, 0055114 oxidation-reduction process; PDB: 2EXR_A 2Q4W_A 3S1E_A 1W1Q_A 2QPM_A 3C0P_A 3BW7_A 3S1C_A 1W1S_A 2QKN_A ....
Probab=99.27 E-value=9.4e-12 Score=113.42 Aligned_cols=125 Identities=14% Similarity=0.155 Sum_probs=79.1
Q ss_pred ccCCCceEEEeechhcHHHHHHHHHhhc-c----CCCeeeeeeeecCCCCCC--CCCCCCCCeeEEEeeecCCC-CC-Cc
Q psy11597 185 YDKHHVVQDYLVPIEELRSCVHYFHDNI-Q----IYPLWICPFLLKDLPGLV--HPAKAQDGMYLDLGLYGEPK-AK-DY 255 (317)
Q Consensus 185 y~~~~~~qd~~IP~~~~~~~l~~i~~~~-~----~~p~~l~p~k~~~~~~~L--~~p~~~~~~~~d~~~y~~~~-~~-~~ 255 (317)
+..+|+|.+++||.+++++|.+.+.+.| + .+|+.++|+.+.+-+..+ ..|.+..-..+++.....|. ++ .+
T Consensus 137 WdvPHPWlnlfvP~s~i~dF~~~V~~~il~~~~~~GpiLvYP~~~~kwd~~~s~v~Pde~vfylv~lLrsa~P~~~~~~l 216 (281)
T PF09265_consen 137 WDVPHPWLNLFVPKSRIEDFDRGVFKGILKDDGNSGPILVYPLNRSKWDTRMSAVIPDEDVFYLVALLRSADPSDGPDDL 216 (281)
T ss_dssp SSS----EEEEEEHHHHHHHHHHCCCCCTTTS-S-SEEEEEEEEGGGS-TTSS----SSSEEEEEEEEE---TTSSCCHH
T ss_pred ccccCcceeeecchHHHHHHHHHHHHHhhccCCCCceEEEEEecccccCCCCcccCCCCCeEEEEEEeCCCCCCCCchhH
Confidence 4467999999999999999999998766 2 379999999987733222 34543333334544444342 22 12
Q ss_pred -chhHHHHHHHHHHHh--cCCeeccccCCCCChHHHHHhCCc--hHHHHHHHhcCCCCCCC
Q psy11597 256 -HSKNTITALESYLGK--IRGFQMLGAGVYQSYSEFRQNYDH--SLYDRVRARLGCEKGFP 311 (317)
Q Consensus 256 -~~~~~~~~le~~v~~--~GGr~yl~k~~~~t~~~f~~~Yp~--~~f~~~r~~~DP~~~f~ 311 (317)
.....|++|-+.+.+ .||++|++.. +|++||++||+. +.|.+.|++|||.+||.
T Consensus 217 ~~l~~qN~~il~~c~~agi~~k~Yl~~~--~t~~dW~~HFG~~W~~f~~~K~~yDP~~IL~ 275 (281)
T PF09265_consen 217 ERLLEQNRRILEFCRKAGIGGKQYLPHY--TTQEDWRRHFGPKWERFVERKRRYDPKAILA 275 (281)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEESS-----SSHHHHHHHHGHHHHHHHHHHHHH-TT--B-
T ss_pred HHHHHHHHHHHHHHHHcCCceEECCCCC--CCHHHHHHHhchHHHHHHHHHHhCCchhhcC
Confidence 358899999999955 4588887765 999999999985 45999999999999874
No 18
>KOG1232|consensus
Probab=98.48 E-value=1.8e-07 Score=87.24 Aligned_cols=78 Identities=26% Similarity=0.371 Sum_probs=63.6
Q ss_pred eeccCCCCC-CcccCcccccEEEEEEEecCccEEEEc-----CCCCcchhhhcccCCCCcEEEEEEEEEEEecccE-EEE
Q psy11597 3 VLGQGLESS-SHKYGVFQNTCVSYELVLSDASLVECS-----EEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV-RAR 75 (317)
Q Consensus 3 ~~~~g~~~~-~~~~G~~~~~V~~~~vv~~~G~~~~~s-----~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~-~~~ 75 (317)
.++|..||. -.|||+.+.+|+++|+|+|+|+|+..- .+...||=+.++|+.|++||||.+++-+.|-++. .+.
T Consensus 193 ~vsTnAGGlrllRYGsLHgsvLGle~Vlp~G~vl~~~~slRKDNTgydlkhLFIGSEGtlGVvT~vSil~~~kpksvn~a 272 (511)
T KOG1232|consen 193 NVSTNAGGLRLLRYGSLHGSVLGLEVVLPNGTVLDLLSSLRKDNTGYDLKHLFIGSEGTLGVVTKVSILAPPKPKSVNVA 272 (511)
T ss_pred eeeccCCceEEEEecccccceeeeEEEcCCCchhhhhhhhcccCccccchhheecCCceeeEEeeEEEeecCCCcceeEE
Confidence 345555554 579999999999999999999998652 2455799999999999999999999999999886 555
Q ss_pred E-CCCC
Q psy11597 76 L-GCEK 80 (317)
Q Consensus 76 ~-~~~~ 80 (317)
| .+++
T Consensus 273 f~gi~s 278 (511)
T KOG1232|consen 273 FIGIES 278 (511)
T ss_pred EEcccc
Confidence 5 5544
No 19
>PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=98.41 E-value=1.7e-07 Score=87.31 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=56.6
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCC--cEEEEEEEEEEEecc
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGT--LGFLTAVEIKIIPVK 70 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~--~Gvit~~~l~~~p~~ 70 (317)
++||++..+...|| .++|+|+++++|++||+++++++ .|++|+.+++.+. .||||++||++.|..
T Consensus 126 TVGGai~~NaG~~G~~~~d~v~~v~vv~~~G~~~~~~~---~e~~~~yR~s~~~~~~gII~~~~l~l~~~~ 193 (298)
T PRK13905 126 TVGGAVFMNAGAYGGETADVLESVEVLDRDGEIKTLSN---EELGFGYRHSALQEEGLIVLSATFQLEPGD 193 (298)
T ss_pred chhHHHHHcCCcCceEhheeEEEEEEEeCCCCEEEEEH---HHcCCcCccccCCCCCEEEEEEEEEEcCCC
Confidence 56777776777787 79999999999999999999974 5999999998655 899999999999973
No 20
>KOG1233|consensus
Probab=98.18 E-value=1.5e-06 Score=81.38 Aligned_cols=71 Identities=31% Similarity=0.493 Sum_probs=61.3
Q ss_pred CCCcccCcccccEEEEEEEecCccEE-EEcC---CCCcchhhhcccCCCCcEEEEEEEEEEEecccE----EEEE-CCCC
Q psy11597 10 SSSHKYGVFQNTCVSYELVLSDASLV-ECSE---EEDRDLFHAIPWSYGTLGFLTAVEIKIIPVKKV----RARL-GCEK 80 (317)
Q Consensus 10 ~~~~~~G~~~~~V~~~~vv~~~G~~~-~~s~---~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~~~----~~~~-~~~~ 80 (317)
-.-..||..-|-|+.+++|+|.|-+- .|+. +..||+-+-+.|+.|++||||++||++.|+|.+ .+.| ++++
T Consensus 276 MKKN~YGNIEDLVVh~~mVtP~Giiek~Cq~PRmS~GPDihh~IlGSEGTLGVitEvtiKirPiPe~~ryGS~aFPNFEq 355 (613)
T KOG1233|consen 276 MKKNKYGNIEDLVVHLNMVTPKGIIEKQCQVPRMSSGPDIHHIILGSEGTLGVITEVTIKIRPIPEVKRYGSFAFPNFEQ 355 (613)
T ss_pred ccccccCChhHheEEEEeecCcchhhhhhcCCcccCCCCcceEEeccCcceeEEEEEEEEEeechhhhhcCccccCcHHH
Confidence 34678999999999999999999873 3543 568999999999999999999999999999986 5667 7777
No 21
>PRK11183 D-lactate dehydrogenase; Provisional
Probab=97.28 E-value=0.00019 Score=71.20 Aligned_cols=64 Identities=16% Similarity=0.223 Sum_probs=51.8
Q ss_pred CCcccCcccccEEEEEEEecCccE-------EEEcCC----------C--------------------------------
Q psy11597 11 SSHKYGVFQNTCVSYELVLSDASL-------VECSEE----------E-------------------------------- 41 (317)
Q Consensus 11 ~~~~~G~~~~~V~~~~vv~~~G~~-------~~~s~~----------~-------------------------------- 41 (317)
...++|.+.++|+. ++|++||++ +..... .
T Consensus 156 ~vlRgga~te~vL~-~~V~~dGel~lVn~lgi~lG~~~e~il~~l~~~gy~~~~~~~~~~~~~d~~y~~~vr~v~~~~pa 234 (564)
T PRK11183 156 LVQRGPAYTEMALY-AQIDEDGKLELVNHLGIDLGETPEEILTRLEDGRFDDEDVRHDGRHASDHEYAERVRDVDADTPA 234 (564)
T ss_pred hheEcchhhhhhhh-hEECCCCcEEEeeccCcccCCCHHHHHHhhhcCCCCccccCCccccCchhhHHHhhhccCCCCcc
Confidence 35789999999999 999999999 332110 1
Q ss_pred --Ccchhhhc--ccCCCCcEEEEEEEEEEEecccE-EEEE
Q psy11597 42 --DRDLFHAI--PWSYGTLGFLTAVEIKIIPVKKV-RARL 76 (317)
Q Consensus 42 --~~dLf~a~--~gg~G~~Gvit~~~l~~~p~~~~-~~~~ 76 (317)
|+|+-..+ .|+.|.+||| +++|++.|.++- ++.|
T Consensus 235 rfnaDl~~LfeasGseGkLgV~-avrLdtfp~p~~~~vf~ 273 (564)
T PRK11183 235 RFNADPRRLFEASGCAGKLAVF-AVRLDTFPAEKNTQVFY 273 (564)
T ss_pred cccCCHHHHhhccCCCceEEEE-EEEeccccCCCcceEEE
Confidence 33888888 9999999999 999999999887 6555
No 22
>PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=97.02 E-value=0.00055 Score=63.94 Aligned_cols=65 Identities=20% Similarity=0.192 Sum_probs=51.6
Q ss_pred eeccCCCCCC-cccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCC-CCcEEEEEEEEEEEeccc
Q psy11597 3 VLGQGLESSS-HKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSY-GTLGFLTAVEIKIIPVKK 71 (317)
Q Consensus 3 ~~~~g~~~~~-~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~-G~~Gvit~~~l~~~p~~~ 71 (317)
++||++..+. ..+|.++|+|.++++|+++| +.+.+. .|+.|+.+++. +.-||||+++|++.|...
T Consensus 131 TvGGav~mNaGa~ggei~d~v~~v~vv~~~G-~~~~~~---~e~~f~YR~s~~~~~~II~~a~~~L~~~~~ 197 (302)
T PRK14652 131 TLGGAVAMNAGTKLGEMKDVVTAVELATADG-AGFVPA---AALGYAYRTCRLPPGAVITRVEVRLRPGDV 197 (302)
T ss_pred chhHHHHHcCCCCceEhhheEEEEEEECCCC-cEEeeh---hhcCcccceeccCCCeEEEEEEEEEecCCH
Confidence 5677776664 57889999999999999999 555543 68999999973 334899999999998643
No 23
>PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.68 E-value=0.0018 Score=60.63 Aligned_cols=64 Identities=11% Similarity=0.109 Sum_probs=52.2
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccC-C-CCcEEEEEEEEEEEec
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWS-Y-GTLGFLTAVEIKIIPV 69 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg-~-G~~Gvit~~~l~~~p~ 69 (317)
++||++..+...|| ..++.+.+++|+++||+++++++ .|+.|+-+.+ + ..-.||++++|++.+.
T Consensus 131 tVGGav~~NAGayG~~~~dvl~~v~vv~~~G~v~~~~~---~e~~f~YR~s~~~~~~~iil~a~~~l~~~ 197 (305)
T PRK12436 131 SVGGALYMNAGAYGGEISFVLTEAVVMTGDGELRTLTK---EAFEFGYRKSVFANNHYIILEARFELEEG 197 (305)
T ss_pred chhHHHHhcCccchhehheeeeEEEEEeCCCCEEEEEH---HHhcCcCCCCcCCCCCEEEEEEEEEEcCC
Confidence 46777777888898 55677778888899999999986 4799999988 3 2357999999999885
No 24
>PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.54 E-value=0.0021 Score=61.50 Aligned_cols=75 Identities=16% Similarity=0.101 Sum_probs=57.8
Q ss_pred eccCCCCCCcccCc-ccccEEEEEEEec-CccEEEEcCCCCcchhhhcccC--CC-CcEEEEEEEEEEEecccE-EEEE-
Q psy11597 4 LGQGLESSSHKYGV-FQNTCVSYELVLS-DASLVECSEEEDRDLFHAIPWS--YG-TLGFLTAVEIKIIPVKKV-RARL- 76 (317)
Q Consensus 4 ~~~g~~~~~~~~G~-~~~~V~~~~vv~~-~G~~~~~s~~~~~dLf~a~~gg--~G-~~Gvit~~~l~~~p~~~~-~~~~- 76 (317)
+||+.-.+..-||. ++|.|.++++++. +|++++.+ +.|++|+-|++ .+ ..+|||+++|++.|...- .+.|
T Consensus 129 VGGAv~mNaGayG~ei~D~l~sV~vvd~~~G~~~~~~---~~el~f~YR~S~f~~~~~~IIl~a~f~L~~~~~~~~~~y~ 205 (363)
T PRK13903 129 AGATPVQNVGAYGQEVSDTITRVRLLDRRTGEVRWVP---AADLGFGYRTSVLKHSDRAVVLEVEFQLDPSGLSAPLRYG 205 (363)
T ss_pred hhhHhhcCCChhHHHHhhhEeEEEEEECCCCEEEEEE---HHHcceeccccccCCCCCEEEEEEEEEEEcCCcccccchH
Confidence 45555566677774 5899999999995 49999987 46999999997 23 378999999999998533 6666
Q ss_pred CCCCc
Q psy11597 77 GCEKG 81 (317)
Q Consensus 77 ~~~~~ 81 (317)
++...
T Consensus 206 ~l~~~ 210 (363)
T PRK13903 206 ELARA 210 (363)
T ss_pred HHHhh
Confidence 55543
No 25
>PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=96.28 E-value=0.003 Score=59.14 Aligned_cols=64 Identities=14% Similarity=0.098 Sum_probs=51.3
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCC--CcEEEEEEEEEEEec
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYG--TLGFLTAVEIKIIPV 69 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G--~~Gvit~~~l~~~p~ 69 (317)
++||++..+...|| .++|+|+++++|+++|+++++++ .|+.++-+.+.= .--||++++|++.|.
T Consensus 131 tVGGav~mNaGayGg~i~D~l~~v~vv~~~G~~~~~~~---~e~~f~YR~S~~~~~~~ii~~~~~~l~~~ 197 (307)
T PRK13906 131 SIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTT---KELELDYRNSIIQKEHLVVLEAAFTLAPG 197 (307)
T ss_pred cHhHHHHhhCCcchhhhhhheeEEEEEeCCCCEEEEEH---HHccCcCCcccCCCCCEEEEEEEEEECCC
Confidence 56777777877885 88999999999999999999986 367777776521 125999999999874
No 26
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage. The region around the histidine that binds the FAD group is conserved in these enzymes (see IPR006093 from INTERPRO).; GO: 0003824 catalytic activity, 0050660 flavin adenine dinucleotide binding; PDB: 1WVE_B 1DII_B 1WVF_A 1DIQ_A 2UUU_B 2UUV_A 1W1M_A 1E8H_B 1E0Y_B 1DZN_B ....
Probab=95.96 E-value=0.0086 Score=53.16 Aligned_cols=109 Identities=14% Similarity=0.167 Sum_probs=64.1
Q ss_pred eEEEeechhcHHHHHHHHHhhccCCCeeeeeeeecCCCCCCCCCCCCCCeeEEEeeecCCC-CCCcchhHHHHHHHHHHH
Q psy11597 191 VQDYLVPIEELRSCVHYFHDNIQIYPLWICPFLLKDLPGLVHPAKAQDGMYLDLGLYGEPK-AKDYHSKNTITALESYLG 269 (317)
Q Consensus 191 ~qd~~IP~~~~~~~l~~i~~~~~~~p~~l~p~k~~~~~~~L~~p~~~~~~~~d~~~y~~~~-~~~~~~~~~~~~le~~v~ 269 (317)
..|+.||.++..++++.+.+.+.....-.+.+-..+ +|-+ .+.+.. .... ........+.+++.+.+.
T Consensus 130 ~~dv~vp~~~l~~~~~~~~~~~~~~~~~~~~~gH~~-~g~~---------h~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 198 (248)
T PF02913_consen 130 TEDVAVPPSRLPEFLREIRALLREYGLEVCHFGHAG-DGNL---------HLYILF-DPRDPEEPERAEALWDELYELVL 198 (248)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHHCTEEEEEEEEEE-ECEE---------EEEEEE-ETTSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecccchhhhhHHHhhhhhhhhccccccceEEcc-CCeE---------EEEeec-ccchHHHHHHHHHHHHHHHHHHH
Confidence 449999999999999999998876553222222211 2222 233321 1111 111134677888888999
Q ss_pred hcCCeeccccCCCC-ChHHHHHhCCc---hHHHHHHHhcCCCCCC
Q psy11597 270 KIRGFQMLGAGVYQ-SYSEFRQNYDH---SLYDRVRARLGCEKGF 310 (317)
Q Consensus 270 ~~GGr~yl~k~~~~-t~~~f~~~Yp~---~~f~~~r~~~DP~~~f 310 (317)
++||..+.---... ...-+.+.++. ..++++|+.+||+|++
T Consensus 199 ~~gG~is~eHG~G~~k~~~~~~~~~~~~~~~~~~iK~~~DP~~il 243 (248)
T PF02913_consen 199 ELGGSISAEHGIGKLKKPYLEEEYGPAALRLMRAIKQAFDPNGIL 243 (248)
T ss_dssp HTT-BBSSSSGGGHHHHHHHCHHCHHHHHHHHHHHHHHH-TTS-B
T ss_pred hcccccccccchhhhhHHHHHHhcchHHHHHHHHhhhccCCccCC
Confidence 99999853211112 22233456654 3599999999999986
No 27
>PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyse the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine [].; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 2IPI_A 2Y3S_A 2Y3R_D 2Y08_B 2Y4G_A 3D2H_A 3FW9_A 3FW8_A 3FWA_A 3D2J_A ....
Probab=95.62 E-value=0.0047 Score=41.17 Aligned_cols=27 Identities=7% Similarity=0.293 Sum_probs=18.3
Q ss_pred HHHHhC-Cc--hHHHHHHHhcCCCCCCCcc
Q psy11597 287 EFRQNY-DH--SLYDRVRARLGCEKGFPVI 313 (317)
Q Consensus 287 ~f~~~Y-p~--~~f~~~r~~~DP~~~f~~~ 313 (317)
++.+.| +. ++.+++|++|||+++|.+.
T Consensus 14 ~~~~~yyg~n~~rL~~iK~~yDP~n~F~~~ 43 (47)
T PF08031_consen 14 DWQEAYYGENYDRLRAIKRKYDPDNVFRFP 43 (47)
T ss_dssp HHHHHHHGGGHHHHHHHHHHH-TT-TS-ST
T ss_pred HHHHHHhchhHHHHHHHHHHhCccceeCCC
Confidence 555544 64 4799999999999999864
No 28
>TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase. This model describes MurB, UDP-N-acetylenolpyruvoylglucosamine reductase, which is also called UDP-N-acetylmuramate dehydrogenase. It is part of the pathway for the biosynthesis of the UDP-N-acetylmuramoyl-pentapeptide that is a precursor of bacterial peptidoglycan.
Probab=94.23 E-value=0.04 Score=51.08 Aligned_cols=64 Identities=16% Similarity=0.153 Sum_probs=49.7
Q ss_pred eeccCCCCCCcccCcccc-cEEEEEEEecCccEEEEcCCCCcchhhhcccCC--CC-cEEEEEEEEEEEec
Q psy11597 3 VLGQGLESSSHKYGVFQN-TCVSYELVLSDASLVECSEEEDRDLFHAIPWSY--GT-LGFLTAVEIKIIPV 69 (317)
Q Consensus 3 ~~~~g~~~~~~~~G~~~~-~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~--G~-~Gvit~~~l~~~p~ 69 (317)
++||++..+...||...+ .|+++++|++||++++.++ .|+-++-|-+. .. ..||+++++++.+.
T Consensus 108 tvGGai~mNAGayG~~i~d~l~~v~vv~~~G~~~~~~~---~~~~f~YR~S~f~~~~~~iil~a~~~l~~~ 175 (284)
T TIGR00179 108 TVGGAVIMNAGAYGVEISEVLVYATILLATGKTEWLTN---EQLGFGYRTSIFQHKYVGLVLKAEFQLTLG 175 (284)
T ss_pred hHHHHHHHhcccchhehhheEEEEEEEeCCCCEEEEEH---HHccccCCccccCCCCcEEEEEEEEEeccc
Confidence 578888888888998887 5799999999999999986 36666666652 11 37999999998543
No 29
>PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.24 E-value=0.11 Score=48.36 Aligned_cols=63 Identities=13% Similarity=0.167 Sum_probs=47.7
Q ss_pred eeccCCCCCCcccCc-ccccEEEEEEEecCccEEEEcCCCCcchhhhcccC-C---CCcEEEEEEEEEEEecc
Q psy11597 3 VLGQGLESSSHKYGV-FQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWS-Y---GTLGFLTAVEIKIIPVK 70 (317)
Q Consensus 3 ~~~~g~~~~~~~~G~-~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg-~---G~~Gvit~~~l~~~p~~ 70 (317)
++||++-.+..-||. ++|.|.++++++ +|++++.+++ |+-+.-+-+ . +.+ |||+++|++.|..
T Consensus 127 TVGGAv~mNAGayG~ei~d~l~~V~~~d-~g~v~~~~~~---e~~f~YR~S~~~~~~~~-iI~~a~f~L~~~~ 194 (297)
T PRK14653 127 SVGGAVYMNAGAYGWETAENIVEVVAYD-GKKIIRLGKN---EIKFSYRNSIFKEEKDL-IILRVTFKLKKGN 194 (297)
T ss_pred hHHHHHHHhCccCchhhheeEEEEEEEC-CCEEEEEchh---hccccCccccCCCCCcE-EEEEEEEEEecCC
Confidence 356666667777998 999999999999 7889888763 555555544 2 233 9999999999863
No 30
>PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=93.08 E-value=0.093 Score=48.91 Aligned_cols=65 Identities=15% Similarity=0.086 Sum_probs=48.4
Q ss_pred eeccCCCCC-CcccCcccccEEEEEEEecCccEEEEcCCCCcchhhhcccCC--CC--------cEEEEEEEEEEEecc
Q psy11597 3 VLGQGLESS-SHKYGVFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSY--GT--------LGFLTAVEIKIIPVK 70 (317)
Q Consensus 3 ~~~~g~~~~-~~~~G~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~--G~--------~Gvit~~~l~~~p~~ 70 (317)
++||+.-.+ +...+.++|.|.++++++.+|+++++++ .|++++-+-+. .. --||++++|++.|..
T Consensus 118 TvGGa~~mNaGayg~ei~d~l~~V~~~~~~g~~~~~~~---~el~f~YR~S~~~~~~~~~~~~~~~ii~~~~~~l~~~~ 193 (295)
T PRK14649 118 TIGGAIYGNAGCYGGDTATVLIRAWLLLNGSECVEWSV---HDFAYGYRTSVLKQLRADGITWRPPLVLAARFRLHRDD 193 (295)
T ss_pred chhHHHHhhccccceEhheeEEEEEEEeCCCCEEEEeH---HHcCcccceeecccccccccccCCeEEEEEEEEECCCC
Confidence 455544444 4444688999999999999999999976 38888888772 11 138999999988753
No 31
>PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=83.75 E-value=1.2 Score=42.36 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=48.5
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecC-ccEEEEcCCCCcchhhhcccCC-C-C---cEEEEEEEEEEEec
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSD-ASLVECSEEEDRDLFHAIPWSY-G-T---LGFLTAVEIKIIPV 69 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~-G~~~~~s~~~~~dLf~a~~gg~-G-~---~Gvit~~~l~~~p~ 69 (317)
++||++-.+..-|| -++|.|.++++++.+ |++++.++ .|+.++-|-+. - . =-||++++|++.|-
T Consensus 118 TVGGAv~mNaGayG~ei~d~l~~V~v~d~~~g~~~~~~~---~e~~f~YR~S~f~~~~~~~~iVl~a~f~L~~~ 188 (334)
T PRK00046 118 TVGAAPIQNIGAYGVELKDVCDYVEALDLATGEFVRLSA---AECRFGYRDSIFKHEYPDRYAITAVGFRLPKQ 188 (334)
T ss_pred chhHHHHhcCCcCcccHheeEEEEEEEECCCCcEEEEEH---HHcCcccccccCCCCCcCCEEEEEEEEEecCC
Confidence 35566666766676 678999999999987 99998886 46777776662 1 1 24999999999886
No 32
>COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=82.97 E-value=2.3 Score=39.40 Aligned_cols=62 Identities=21% Similarity=0.160 Sum_probs=46.7
Q ss_pred ccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccCC--CCcEEEEEEEEEEEec
Q psy11597 5 GQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSY--GTLGFLTAVEIKIIPV 69 (317)
Q Consensus 5 ~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~--G~~Gvit~~~l~~~p~ 69 (317)
||+.-.+..-|| -++|.|.++++++.+|++.+.++ .||-++-|-|. -.-.||++++|++.|-
T Consensus 119 Ggav~mNaGAyG~Ei~d~~~~v~~ld~~G~~~~l~~---~el~f~YR~S~f~~~~~vvl~v~f~L~~~ 183 (291)
T COG0812 119 GGAVIMNAGAYGVEISDVLVSVEVLDRDGEVRWLSA---EELGFGYRTSPFKKEYLVVLSVEFKLTKG 183 (291)
T ss_pred chhhhccCcccccchheeEEEEEEEcCCCCEEEEEH---HHhCcccccCcCCCCCEEEEEEEEEeCCC
Confidence 444444555554 47899999999999999999985 47777777762 1229999999999985
No 33
>PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=82.75 E-value=1.9 Score=39.76 Aligned_cols=64 Identities=17% Similarity=0.148 Sum_probs=47.0
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccCC-CCcEEEEEEEEEEEecc
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSY-GTLGFLTAVEIKIIPVK 70 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~-G~~Gvit~~~l~~~p~~ 70 (317)
++||++-.+..-|| -++|.|.++++++ +|++++.++ .|+.++-|-+. -.=-||++++|++.|..
T Consensus 106 TVGGAv~mNaGayG~ei~d~l~~V~~~~-~g~~~~~~~---~e~~f~YR~S~~~~~~iIl~a~f~l~~~~ 171 (273)
T PRK14651 106 QVGGAVKMNAGTRFGEMADALHTVEIVH-DGGFHQYSP---DELGFGYRHSGLPPGHVVTRVRLKLRPST 171 (273)
T ss_pred chhhHHHhhCCccccChheeEEEEEEEE-CCCEEEEEH---HHccccccccCCCCCEEEEEEEEEECCCC
Confidence 45666666767776 6789999999997 899998886 35556555551 11249999999998854
No 34
>PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=81.51 E-value=2.1 Score=40.03 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=48.1
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCC--CcEEEEEEEEEEEeccc
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYG--TLGFLTAVEIKIIPVKK 71 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G--~~Gvit~~~l~~~p~~~ 71 (317)
++||++-.+..-|| -++|.|.++++++.+|++++.+. .|+-++-|-+.= .=.||++++|++.|..+
T Consensus 128 TVGGAv~mNAGayG~ei~d~l~sV~~~d~~g~~~~~~~---~e~~f~YR~S~f~~~~~iIl~a~f~L~~~~~ 196 (302)
T PRK14650 128 TLGGAIWMNARCFGNEISEILDKITFIDEKGKTICKKF---KKEEFKYKISPFQNKNTFILKATLNLKKGNK 196 (302)
T ss_pred chhHHHHhhCCccccchheeEEEEEEEECCCCEEEEEH---HHcCcccccccCCCCCEEEEEEEEEEcCCCH
Confidence 34555556666676 67899999999999999998875 355566665521 12599999999988543
No 35
>PF09129 Chol_subst-bind: Cholesterol oxidase, substrate-binding; InterPro: IPR015213 The substrate-binding domain found in cholesterol oxidase is composed of an eight-stranded mixed beta-pleated sheet and six alpha-helices. This domain is positioned over the isoalloxazine ring system of the FAD cofactor bound by the FAD-binding domain (IPR006094 from INTERPRO) and forms the roof of the active site cavity, allowing for catalysis of oxidation and isomerisation of cholesterol to cholest-4-en-3-one []. ; PDB: 3JS8_A 1I19_B 2I0K_A.
Probab=62.94 E-value=16 Score=33.70 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=36.9
Q ss_pred CCCCeeEEEeeecCCCCCCcchhHHHHHHHHHHHh-cCC-----eeccccCCC------CChHHH-----HHhCC----c
Q psy11597 236 AQDGMYLDLGLYGEPKAKDYHSKNTITALESYLGK-IRG-----FQMLGAGVY------QSYSEF-----RQNYD----H 294 (317)
Q Consensus 236 ~~~~~~~d~~~y~~~~~~~~~~~~~~~~le~~v~~-~GG-----r~yl~k~~~------~t~~~f-----~~~Yp----~ 294 (317)
+.+++++=+-+..-|..+ .+..++|+||+-|.+ +.| |+-|.|-=- .+.+++ ...|- .
T Consensus 214 peWDvAiWldvLtlPGTP--~a~~Fyre~EqWm~~~y~g~yAt~RpEWSKGWayt~~~aw~d~~~l~~~iP~~~~~G~p~ 291 (321)
T PF09129_consen 214 PEWDVAIWLDVLTLPGTP--GANAFYREMEQWMFSNYSGSYATVRPEWSKGWAYTDDAAWTDETVLTTTIPNSYRAGQPA 291 (321)
T ss_dssp TT--EEEEEEEEE-TT-T--THHHHHHHHHHHHHHHSBTTTEEEEE-TTSB-S-SSS-TT--HHHHHTHHHHHTTTTS-C
T ss_pred CCcceEEEEeeccCCCCc--cHHHHHHHHHHHHHhhcCCccceEeeeeccccccCCCccccChhHHhhhchHHHhcCCCC
Confidence 456664444444456555 478899999999987 444 443433221 223333 22552 2
Q ss_pred -hHHH---HHHHhcCCCCCCCccc
Q psy11597 295 -SLYD---RVRARLGCEKGFPVIY 314 (317)
Q Consensus 295 -~~f~---~~r~~~DP~~~f~~~~ 314 (317)
..|. +.-.+|||+++|.|.+
T Consensus 292 ~~~Wd~A~atL~~~DPhriFss~l 315 (321)
T PF09129_consen 292 DDNWDTARATLNRYDPHRIFSSPL 315 (321)
T ss_dssp CCSHHHHHHHHHHH-TT--S--HH
T ss_pred CCCHHHHHHHHhccCccchhccHH
Confidence 2344 4456899999999954
No 36
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional
Probab=61.54 E-value=5.8 Score=37.93 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCCeeccccCCCCChHHHHHhCCc---hHHHHHHHhcCCCCCCC
Q psy11597 262 TALESYLGKIRGFQMLGAGVYQSYSEFRQNYDH---SLYDRVRARLGCEKGFP 311 (317)
Q Consensus 262 ~~le~~v~~~GGr~yl~k~~~~t~~~f~~~Yp~---~~f~~~r~~~DP~~~f~ 311 (317)
.++-+.+.++||.--+.....-..+.|.. +|. ..-+++|+++||.++|-
T Consensus 293 ~~~r~~~~~~gG~~tl~~a~~~~~~~~~~-~~~~~~~l~~~lK~~fDP~~iln 344 (352)
T PRK11282 293 AAIRAAAAAAGGHATLFRAGDRAGPVFHP-LPAPLLRIHRRLKQAFDPAGIFN 344 (352)
T ss_pred HHHHHHHHhcCCEEEEEECCcccccCCCC-CCHHHHHHHHHHHHhcCcccCCC
Confidence 56888899999998776554333334443 543 35899999999999974
No 37
>KOG1233|consensus
Probab=58.89 E-value=51 Score=31.96 Aligned_cols=110 Identities=14% Similarity=0.167 Sum_probs=60.6
Q ss_pred EEeechhcHHHHHHHHHhhcc----C----CCee-eeeeeecCCCCCCCCCCCCCCeeEEEeeecCCCCCCcchhHHHHH
Q psy11597 193 DYLVPIEELRSCVHYFHDNIQ----I----YPLW-ICPFLLKDLPGLVHPAKAQDGMYLDLGLYGEPKAKDYHSKNTITA 263 (317)
Q Consensus 193 d~~IP~~~~~~~l~~i~~~~~----~----~p~~-l~p~k~~~~~~~L~~p~~~~~~~~d~~~y~~~~~~~~~~~~~~~~ 263 (317)
|--+|+++....-+-+.+.+. . +|.+ -|-+...- ..|..+|+=|++-..... .....+++
T Consensus 484 ETSvPWDrv~~LCRnVKer~~rEck~~gv~~~~~s~CRVTQtY--------DAGACiYFYFgFn~rg~~---dplevfe~ 552 (613)
T KOG1233|consen 484 ETSVPWDRVLSLCRNVKERMKRECKAQGVTHPVLSNCRVTQTY--------DAGACIYFYFGFNARGLK---DPLEVFER 552 (613)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHhcCCCcccccceeEEEEe--------cCceEEEEEEeeccccCC---chHHHHHH
Confidence 445799988887777776552 1 2221 13222211 123344555555322211 35778888
Q ss_pred HHHHH----HhcCCeeccccCCCCChHHHHHhC-Cc---hHHHHHHHhcCCCCCCCcc
Q psy11597 264 LESYL----GKIRGFQMLGAGVYQSYSEFRQNY-DH---SLYDRVRARLGCEKGFPVI 313 (317)
Q Consensus 264 le~~v----~~~GGr~yl~k~~~~t~~~f~~~Y-p~---~~f~~~r~~~DP~~~f~~~ 313 (317)
+|... .+.||...+---.---+.||-.-- .. ..+.++|+.+||.++|.|-
T Consensus 553 iE~aARdEIlacGGSlSHHHGVGKiRkqW~~~~~~~vG~~llka~K~~lDP~NIFa~~ 610 (613)
T KOG1233|consen 553 IETAARDEILACGGSLSHHHGVGKIRKQWMLTTNGAVGIALLKAIKSELDPANIFASA 610 (613)
T ss_pred HHHHhHHHHHhcCCcccccccchHHHHHHHHhhhhhHhHHHHHHHHHhcChhhhcccc
Confidence 87644 467887632111112244554322 21 3599999999999999863
No 38
>PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=57.29 E-value=14 Score=35.36 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=43.9
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEE--------------------ecCccE-------------EEEcCCCCcchhhh
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELV--------------------LSDASL-------------VECSEEEDRDLFHA 48 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv--------------------~~~G~~-------------~~~s~~~~~dLf~a 48 (317)
++||++-.+..-|| -++|.|.+++++ +.+|++ .+.+ +.|+-++
T Consensus 129 TVGGAv~mNAGAyG~ei~d~l~~V~v~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~e~~f~ 205 (354)
T PRK14648 129 SVGGAAYMNARCYGRAIADCFHSARTLVLHPVRSRAKELPEVRKNAQDKRGECLGLDGGPFTCSSFQTVF---ARAGDWG 205 (354)
T ss_pred chhhHhhhcCCccceEhhheEEEEEEEeccCcccccccccccccccccCCCceecccccccccccceEec---HHHcCcc
Confidence 45667777777777 678999999999 466776 2333 2455555
Q ss_pred cccCCCC----------cEEEEEEEEEEEecc
Q psy11597 49 IPWSYGT----------LGFLTAVEIKIIPVK 70 (317)
Q Consensus 49 ~~gg~G~----------~Gvit~~~l~~~p~~ 70 (317)
-+-+.=. --||++++|++.|..
T Consensus 206 YR~S~f~~~~~~~~~~~~~iIl~v~f~L~~~~ 237 (354)
T PRK14648 206 YKRSPFQSPHGVELHAGRRLILSLCVRLTPGN 237 (354)
T ss_pred CCcccCCCCccccccCCCEEEEEEEEEEcCCC
Confidence 5555211 139999999998863
No 39
>PF03392 OS-D: Insect pheromone-binding family, A10/OS-D; InterPro: IPR005055 A class of small (14-20 Kd) water-soluble proteins, called odorant binding proteins (OBPs), first discovered in the insect sensillar lymph but also in the mucus of vertebrates, is postulated to mediate the solubilisation of hydrophobic odorant molecules, and thereby to facilitate their transport to the receptor neurons. The product of a gene expressed in the olfactory system of Drosophila melanogaster (Fruit fly), OS-D, shares features common to vertebrate odorant-binding proteins, but has a primary structure unlike odorant-binding proteins []. OS-D derivatives have subsequently been found in chemosensory organs of phylogenetically distinct insects, including cockroaches, phasmids and moths, suggesting that OS-D-like proteins seem to be conserved in the insect phylum.; PDB: 1KX9_A 1N8U_A 1KX8_A 1K19_A 1N8V_A 2GVS_A 2JNT_A.
Probab=49.84 E-value=6.6 Score=30.14 Aligned_cols=18 Identities=6% Similarity=0.148 Sum_probs=14.0
Q ss_pred hHHHHHHHhcCCCCCCCc
Q psy11597 295 SLYDRVRARLGCEKGFPV 312 (317)
Q Consensus 295 ~~f~~~r~~~DP~~~f~~ 312 (317)
+.|.+++++|||+|.+..
T Consensus 76 ~~w~~l~~KyDp~~~y~~ 93 (95)
T PF03392_consen 76 DEWEELVKKYDPEGKYRK 93 (95)
T ss_dssp HHHHHHHHHHTTT-TTHH
T ss_pred HHHHHHHHHHCCCcchhh
Confidence 359999999999987643
No 40
>PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional
Probab=34.73 E-value=39 Score=30.89 Aligned_cols=59 Identities=14% Similarity=-0.088 Sum_probs=40.0
Q ss_pred eeccCCCCCCcccC-cccccEEEEEEEecCccEEEEcCCCCcchhhhcccCCCCcEEEEEEEEEEEecc
Q psy11597 3 VLGQGLESSSHKYG-VFQNTCVSYELVLSDASLVECSEEEDRDLFHAIPWSYGTLGFLTAVEIKIIPVK 70 (317)
Q Consensus 3 ~~~~g~~~~~~~~G-~~~~~V~~~~vv~~~G~~~~~s~~~~~dLf~a~~gg~G~~Gvit~~~l~~~p~~ 70 (317)
++||++-.+..-|| -++|.|.++++++ | +.+ ..|+.++-+-+.=. .||++++|++.|..
T Consensus 101 tVGGAv~mNaGa~g~ei~d~l~~V~~~~--~---~~~---~~e~~f~YR~S~~~-~iIl~a~f~l~~~~ 160 (257)
T PRK13904 101 TLGGLVKMNAGLKEYEISNNLESICTNG--G---WIE---KEDIGFGYRSSGIN-GVILEARFKKTHGF 160 (257)
T ss_pred cHHHHHHhcCCcCccchheeEEEEEEEe--e---EEe---HHHCcccccCcCCC-cEEEEEEEEECCCC
Confidence 35666666666676 6789999999998 4 233 24555555555211 39999999998854
No 41
>PF02209 VHP: Villin headpiece domain; InterPro: IPR003128 Villin is an F-actin bundling protein involved in the maintenance of the microvilli of the absorptive epithelia. The villin-type "headpiece" domain is a modular motif found at the extreme C terminus of larger "core" domains in over 25 cytoskeletal proteins in plants and animals, often in assocation with the Gelsolin repeat. Although the headpiece is classified as an F-actin-binding domain, it has been shown that not all headpiece domains are intrinsically F-actin-binding motifs, surface charge distribution may be an important element for F-actin recognition []. An autonomously folding, 35 residue, thermostable subdomain (HP36) of the full-length 76 amino acid residue villin headpiece, is the smallest known example of a cooperatively folded domain of a naturally occurring protein. The structure of HP36, as determined by NMR spectroscopy, consists of three short helices surrounding a tightly packed hydrophobic core []. ; GO: 0003779 actin binding, 0007010 cytoskeleton organization; PDB: 1ZV6_A 1QZP_A 1UND_A 2PPZ_A 3TJW_B 1YU8_X 2JM0_A 1WY4_A 3MYC_A 1YU5_X ....
Probab=27.88 E-value=24 Score=22.01 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=12.9
Q ss_pred CCChHHHHHhCCc--hHHHHH
Q psy11597 282 YQSYSEFRQNYDH--SLYDRV 300 (317)
Q Consensus 282 ~~t~~~f~~~Yp~--~~f~~~ 300 (317)
|+|.+||.+.|+- ++|.++
T Consensus 1 YLsd~dF~~vFgm~~~eF~~l 21 (36)
T PF02209_consen 1 YLSDEDFEKVFGMSREEFYKL 21 (36)
T ss_dssp GS-HHHHHHHHSS-HHHHHHS
T ss_pred CcCHHHHHHHHCCCHHHHHHC
Confidence 5789999999874 456543
No 42
>PF08077 Cm_res_leader: Chloramphenicol resistance gene leader peptide; InterPro: IPR012537 This family consists of chloramphenicol (Cm) resistance gene leader peptides. Inducible resistance to Cm in both Gram-positive and Gram-negative bacteria is controlled by translation attenuation. In translation attenuation, the ribosome-binding-site (RBS) for the resistance determinant is sequestered in a secondary structure domain within the mRNA. Preceding the secondary structure is a short, translated ORF termed the leader. Ribosome stalling in the leader causes the destabilisation of the downstream secondary structure, allowing initiation of translation of the Cm resistance gene [].
Probab=21.06 E-value=1.1e+02 Score=15.24 Aligned_cols=14 Identities=29% Similarity=0.223 Sum_probs=10.5
Q ss_pred cCCCCcEEEEEEEE
Q psy11597 51 WSYGTLGFLTAVEI 64 (317)
Q Consensus 51 gg~G~~Gvit~~~l 64 (317)
|--|.+.|||+-||
T Consensus 3 gvpgalavvtrrti 16 (17)
T PF08077_consen 3 GVPGALAVVTRRTI 16 (17)
T ss_pred CCCceEEEEEEeec
Confidence 44578889988776
No 43
>PF11582 DUF3240: Protein of unknown function (DUF3240); InterPro: IPR021634 This family of proteins with unknown function appears to be restricted to Proteobacteria. ; PDB: 3CE8_A.
Probab=20.68 E-value=1.3e+02 Score=23.27 Aligned_cols=37 Identities=14% Similarity=0.310 Sum_probs=26.7
Q ss_pred CceE-EEeechhcHHHHHHHHHhhccCCC--eeeeeeeec
Q psy11597 189 HVVQ-DYLVPIEELRSCVHYFHDNIQIYP--LWICPFLLK 225 (317)
Q Consensus 189 ~~~q-d~~IP~~~~~~~l~~i~~~~~~~p--~~l~p~k~~ 225 (317)
..++ ++++|.+.+++.++.+.+.+...+ =|+.|+-.+
T Consensus 59 ~~~~~~~~~~~~~~~~Ll~~L~~~~~~~~i~ywv~Pv~~~ 98 (102)
T PF11582_consen 59 RRVRFQVILPEEDAEELLAALKQEFAGTGIRYWVTPVIEF 98 (102)
T ss_dssp EEEEEEEEEEGGGHHHHHHHHHHHTTTS--EEEEEE-S--
T ss_pred ceEEEEEEECHHHHHHHHHHHHHHcCCCCcEEEEEhHHhC
Confidence 3444 899999999999999999987644 377776543
No 44
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=20.42 E-value=1.1e+02 Score=27.39 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHhcCCeeccccCC-C-CChHHHHHhCCc-h------HHHHHHHhcC
Q psy11597 258 KNTITALESYLGKIRGFQMLGAGV-Y-QSYSEFRQNYDH-S------LYDRVRARLG 305 (317)
Q Consensus 258 ~~~~~~le~~v~~~GGr~yl~k~~-~-~t~~~f~~~Yp~-~------~f~~~r~~~D 305 (317)
..+.++|++.+.++|...-...+. + .|+++|.+.++. . -|+.+||+++
T Consensus 103 ~~l~~~l~~~~~~~~i~~~~~~~~~Fl~s~~~f~~~~~~~k~~~Me~FYR~mRkr~~ 159 (224)
T PF04244_consen 103 YRLEQRLESLAQQLGIPLEVLEDPHFLTSREEFAEWFEGRKRLRMEYFYREMRKRFG 159 (224)
T ss_dssp HHHHHHHHH----SSS-EEEE--TTSSS-HHHHHHHHTT-SS--HHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhcccCCceEEeCCCCccCCHHHHHHHHccCCceeHHHHHHHHHHHcC
Confidence 457788888888888877444444 4 489999988853 2 2999999985
No 45
>PRK02539 hypothetical protein; Provisional
Probab=20.23 E-value=24 Score=26.50 Aligned_cols=22 Identities=9% Similarity=0.019 Sum_probs=18.5
Q ss_pred CcccccEEEEEEEecCccEEEE
Q psy11597 16 GVFQNTCVSYELVLSDASLVEC 37 (317)
Q Consensus 16 G~~~~~V~~~~vv~~~G~~~~~ 37 (317)
+.+.+++.+++||+++|+.|+-
T Consensus 42 ~~~~~~L~~i~ivD~~G~dVTP 63 (85)
T PRK02539 42 RSVRHHIEGIKIVDEEGNDVTP 63 (85)
T ss_pred HHHHHHhccceEECCCCCCCCH
Confidence 4567889999999999988754
Done!