RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11599
         (76 letters)



>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing
           protein 1, Spred-1 {Western clawed frog (Xenopus
           tropicalis) [TaxId: 8364]}
          Length = 114

 Score = 68.0 bits (166), Expect = 3e-17
 Identities = 35/54 (64%), Positives = 44/54 (81%)

Query: 16  GVVLSCTITRDFTYNKVMPTFHHWQTGNKKFGLTFQAAADARAFDQGVRNALQE 69
            VVL C + RD  YNKV PTFHHW+ G+KKFGLTFQ+ ADARAFD+G+R A+++
Sbjct: 57  TVVLECVLRRDLVYNKVTPTFHHWRIGDKKFGLTFQSPADARAFDRGIRRAIED 110


>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 145

 Score = 65.7 bits (160), Expect = 3e-16
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 15  TGVVLSCTITRDFTYNKVMPTFHHWQTG--NKKFGLTFQAAADARAFDQGVRNAL 67
           +  +++ TIT + T+ K    F  W     N  +GL F +      F +  +   
Sbjct: 55  SKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFK 109


>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 115

 Score = 57.3 bits (138), Expect = 3e-13
 Identities = 20/62 (32%), Positives = 30/62 (48%)

Query: 8   LGSEISFTGVVLSCTITRDFTYNKVMPTFHHWQTGNKKFGLTFQAAADARAFDQGVRNAL 67
                    VV++C I R   YN+  P FH W+   + +GL F +  DA  F  G+ +AL
Sbjct: 51  GRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASAL 110

Query: 68  QE 69
           + 
Sbjct: 111 EA 112


>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 114

 Score = 56.0 bits (135), Expect = 1e-12
 Identities = 11/53 (20%), Positives = 21/53 (39%)

Query: 17  VVLSCTITRDFTYNKVMPTFHHWQTGNKKFGLTFQAAADARAFDQGVRNALQE 69
           ++    +  +F YN     FH +     +  L F    +A+ F + V + L  
Sbjct: 60  LLWEQELYNNFVYNSPRGYFHTFAGDTCQVALNFANEEEAKKFRKAVTDLLGR 112


>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 111

 Score = 53.8 bits (129), Expect = 8e-12
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 15  TGVVLSCTITRDFTYNKVMPTFHHWQTGNKKFGLTFQAAADARAFDQGVRNALQE 69
             VV++C I +   YN+   TFH W+   + +GL F +  DA  F   + +AL+ 
Sbjct: 55  HQVVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEV 109


>d1zt2a1 d.264.1.1 (A:3-329) DNA primase small subunit PriA
           {Sulfolobus solfataricus [TaxId: 2287]}
          Length = 327

 Score = 25.0 bits (54), Expect = 0.86
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 36  FHHWQTGNKKFGLTFQAAADARAFDQGVRNALQEYLHDKSL 76
              + +GN+ F +      +    D   R  + EY+    +
Sbjct: 166 PKVYFSGNRGFHVQVDCYGNCALLDSDERKEIAEYVMGIGV 206


>d1ei5a2 b.61.3.1 (A:418-520) D-aminopeptidase, middle and
           C-terminal domains {Ochrobactrum anthropi [TaxId: 529]}
          Length = 103

 Score = 23.6 bits (51), Expect = 2.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)

Query: 13  SFTGVVLSCTITRDFTYNKVMP 34
             TG+ + C + R   Y +V P
Sbjct: 82  EITGLSVGCWLARGVEYRRVQP 103


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.134    0.423 

Gapped
Lambda     K      H
   0.267   0.0556    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 294,378
Number of extensions: 10749
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 9
Length of query: 76
Length of database: 2,407,596
Length adjustment: 43
Effective length of query: 33
Effective length of database: 1,817,206
Effective search space: 59967798
Effective search space used: 59967798
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.3 bits)